Query 004759
Match_columns 732
No_of_seqs 379 out of 2591
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 04:54:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004759.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004759hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fzv_A Putative methyltransfer 100.0 4.5E-52 1.5E-56 452.0 12.5 212 9-255 85-304 (359)
2 2frx_A Hypothetical protein YE 100.0 3.5E-48 1.2E-52 436.3 28.4 378 17-645 64-446 (479)
3 3m4x_A NOL1/NOP2/SUN family pr 100.0 5.3E-46 1.8E-50 415.8 26.6 358 18-620 62-419 (456)
4 2b9e_A NOL1/NOP2/SUN domain fa 100.0 5.9E-45 2E-49 388.9 20.7 181 56-263 80-262 (309)
5 1ixk_A Methyltransferase; open 100.0 3.3E-43 1.1E-47 375.4 20.0 246 17-381 70-315 (315)
6 3m6w_A RRNA methylase; rRNA me 100.0 3.4E-43 1.2E-47 393.7 19.5 205 16-264 53-257 (464)
7 2yxl_A PH0851 protein, 450AA l 100.0 1.6E-39 5.4E-44 362.9 20.2 204 17-262 212-415 (450)
8 3ajd_A Putative methyltransfer 100.0 4.5E-39 1.5E-43 336.1 19.4 179 56-264 61-239 (274)
9 1sqg_A SUN protein, FMU protei 100.0 1.4E-37 4.8E-42 344.8 19.5 196 17-255 199-394 (429)
10 3id6_C Fibrillarin-like rRNA/T 99.7 2.6E-16 8.9E-21 161.6 14.9 140 74-268 72-218 (232)
11 4dmg_A Putative uncharacterize 99.7 1.1E-16 3.7E-21 176.1 11.4 161 56-263 194-356 (393)
12 1wxx_A TT1595, hypothetical pr 99.6 5.8E-15 2E-19 161.1 12.5 163 56-263 191-355 (382)
13 3v97_A Ribosomal RNA large sub 99.5 2.6E-14 8.8E-19 167.9 12.8 180 17-262 499-680 (703)
14 3c0k_A UPF0064 protein YCCW; P 99.5 2.3E-14 8E-19 156.9 10.5 165 56-263 201-369 (396)
15 2as0_A Hypothetical protein PH 99.5 3.5E-14 1.2E-18 155.4 10.9 164 57-262 198-364 (396)
16 3lpm_A Putative methyltransfer 99.4 1.7E-12 5.7E-17 133.4 14.5 153 67-255 37-192 (259)
17 2igt_A SAM dependent methyltra 99.4 5.1E-13 1.7E-17 143.6 10.2 164 56-259 130-299 (332)
18 2b78_A Hypothetical protein SM 99.4 6.3E-13 2.2E-17 145.5 10.5 141 77-257 211-355 (385)
19 3e05_A Precorrin-6Y C5,15-meth 99.4 4.1E-12 1.4E-16 125.0 14.6 135 71-263 33-167 (204)
20 2frn_A Hypothetical protein PH 99.4 3.3E-12 1.1E-16 133.3 14.1 129 76-262 123-255 (278)
21 2dul_A N(2),N(2)-dimethylguano 99.4 2.1E-13 7.1E-18 149.3 4.6 122 78-255 47-183 (378)
22 3k6r_A Putative transferase PH 99.4 4.5E-12 1.5E-16 133.4 14.2 130 76-263 123-256 (278)
23 3njr_A Precorrin-6Y methylase; 99.4 4.3E-12 1.5E-16 126.4 13.2 131 71-263 48-179 (204)
24 1i1n_A Protein-L-isoaspartate 99.3 3.2E-12 1.1E-16 127.7 11.2 114 75-245 74-192 (226)
25 3evz_A Methyltransferase; NYSG 99.3 1.7E-11 5.7E-16 122.5 16.0 152 75-262 52-204 (230)
26 2b3t_A Protein methyltransfera 99.3 9.6E-12 3.3E-16 128.9 14.4 143 77-255 108-254 (276)
27 3axs_A Probable N(2),N(2)-dime 99.3 1.2E-12 4E-17 144.0 7.8 126 77-256 51-178 (392)
28 1yb2_A Hypothetical protein TA 99.3 7.4E-12 2.5E-16 129.8 12.2 145 58-264 90-235 (275)
29 3tma_A Methyltransferase; thum 99.3 1.1E-11 3.9E-16 133.3 13.9 132 72-252 197-328 (354)
30 3mti_A RRNA methylase; SAM-dep 99.3 2.3E-11 7.9E-16 117.5 14.2 135 75-254 19-156 (185)
31 3eey_A Putative rRNA methylase 99.3 2.9E-11 9.9E-16 117.9 14.1 137 74-253 18-159 (197)
32 4df3_A Fibrillarin-like rRNA/T 99.3 1.4E-11 4.9E-16 126.5 11.9 110 74-235 73-182 (233)
33 3hm2_A Precorrin-6Y C5,15-meth 99.3 1.5E-11 5.1E-16 117.3 10.8 132 73-264 20-153 (178)
34 2qm3_A Predicted methyltransfe 99.2 6.6E-11 2.2E-15 128.6 15.0 143 58-255 151-300 (373)
35 2gpy_A O-methyltransferase; st 99.2 1.8E-11 6.2E-16 123.1 9.5 142 42-238 21-163 (233)
36 3dou_A Ribosomal RNA large sub 99.2 1.2E-11 4E-16 122.5 7.5 130 76-254 23-155 (191)
37 2f8l_A Hypothetical protein LM 99.2 7.1E-11 2.4E-15 126.7 12.7 167 57-254 105-276 (344)
38 3mb5_A SAM-dependent methyltra 99.2 6.8E-11 2.3E-15 120.1 11.9 127 69-255 84-211 (255)
39 1nt2_A Fibrillarin-like PRE-rR 99.2 8.6E-11 2.9E-15 117.8 12.3 135 74-265 53-194 (210)
40 2pwy_A TRNA (adenine-N(1)-)-me 99.2 3.3E-10 1.1E-14 114.7 16.7 112 71-238 89-201 (258)
41 3u81_A Catechol O-methyltransf 99.2 4.2E-11 1.4E-15 119.8 9.9 151 61-262 41-193 (221)
42 1o54_A SAM-dependent O-methylt 99.2 1.7E-10 5.9E-15 119.4 14.1 131 72-264 106-237 (277)
43 3a27_A TYW2, uncharacterized p 99.2 8.1E-11 2.8E-15 122.6 11.1 108 74-239 115-222 (272)
44 4dzr_A Protein-(glutamine-N5) 99.2 2.8E-11 9.7E-16 118.1 6.7 146 77-252 29-178 (215)
45 1nv8_A HEMK protein; class I a 99.2 8.5E-11 2.9E-15 123.4 10.8 136 77-252 122-262 (284)
46 3tfw_A Putative O-methyltransf 99.2 4.3E-11 1.5E-15 122.5 8.2 125 63-239 48-174 (248)
47 3p9n_A Possible methyltransfer 99.1 2.5E-10 8.5E-15 111.1 12.5 112 77-238 43-156 (189)
48 2yx1_A Hypothetical protein MJ 99.1 2.1E-10 7.1E-15 123.1 12.1 102 76-239 193-295 (336)
49 3duw_A OMT, O-methyltransferas 99.1 1.3E-10 4.5E-15 115.6 9.8 127 63-238 43-170 (223)
50 3gdh_A Trimethylguanosine synt 99.1 1E-10 3.4E-15 117.9 9.0 94 66-192 66-160 (241)
51 1wy7_A Hypothetical protein PH 99.1 3.9E-10 1.3E-14 110.7 12.8 127 75-261 46-172 (207)
52 2ozv_A Hypothetical protein AT 99.1 1.8E-10 6.2E-15 118.9 10.5 142 67-235 25-170 (260)
53 3bt7_A TRNA (uracil-5-)-methyl 99.1 1.1E-10 3.8E-15 126.8 9.3 115 79-238 214-329 (369)
54 2ift_A Putative methylase HI07 99.1 2.3E-10 8E-15 113.3 10.6 110 78-239 53-167 (201)
55 3grz_A L11 mtase, ribosomal pr 99.1 6.3E-10 2.1E-14 109.3 13.2 124 76-262 58-181 (205)
56 3g89_A Ribosomal RNA small sub 99.1 3.7E-10 1.3E-14 116.2 11.4 129 75-257 77-205 (249)
57 3dh0_A SAM dependent methyltra 99.1 1.3E-09 4.6E-14 107.5 15.0 138 73-263 32-178 (219)
58 1l3i_A Precorrin-6Y methyltran 99.1 4.1E-10 1.4E-14 107.7 10.7 130 73-263 28-159 (192)
59 1xxl_A YCGJ protein; structura 99.1 8.8E-10 3E-14 111.3 13.2 122 63-238 6-127 (239)
60 1dus_A MJ0882; hypothetical pr 99.1 1.1E-09 3.8E-14 104.8 13.2 133 73-262 47-181 (194)
61 3c3y_A Pfomt, O-methyltransfer 99.1 4.3E-10 1.5E-14 114.4 10.5 149 42-239 35-185 (237)
62 3fpf_A Mtnas, putative unchara 99.1 6.5E-10 2.2E-14 117.9 12.2 106 72-234 116-221 (298)
63 3lbf_A Protein-L-isoaspartate 99.1 1E-09 3.6E-14 107.9 12.8 108 70-237 69-176 (210)
64 1xdz_A Methyltransferase GIDB; 99.1 4.4E-10 1.5E-14 113.9 10.3 127 75-255 67-193 (240)
65 3dr5_A Putative O-methyltransf 99.0 2.3E-10 7.8E-15 115.7 8.1 112 75-238 53-166 (221)
66 1yzh_A TRNA (guanine-N(7)-)-me 99.0 1.4E-09 4.8E-14 108.0 13.6 140 77-263 40-179 (214)
67 3vc1_A Geranyl diphosphate 2-C 99.0 1.8E-09 6.2E-14 113.6 15.2 114 73-240 111-226 (312)
68 1inl_A Spermidine synthase; be 99.0 2.3E-10 7.8E-15 120.8 7.9 137 78-261 90-232 (296)
69 2fpo_A Methylase YHHF; structu 99.0 5.3E-10 1.8E-14 110.8 9.5 109 78-239 54-164 (202)
70 3ntv_A MW1564 protein; rossman 99.0 4.7E-10 1.6E-14 113.4 9.3 122 62-236 55-177 (232)
71 2fca_A TRNA (guanine-N(7)-)-me 99.0 1.1E-09 3.8E-14 109.5 11.7 118 77-236 37-154 (213)
72 1i9g_A Hypothetical protein RV 99.0 1.4E-09 4.9E-14 111.8 12.8 112 71-238 92-206 (280)
73 3tr6_A O-methyltransferase; ce 99.0 2E-10 7E-15 114.2 6.1 130 60-238 46-177 (225)
74 2plw_A Ribosomal RNA methyltra 99.0 1E-09 3.4E-14 107.1 10.9 146 76-253 20-169 (201)
75 3kr9_A SAM-dependent methyltra 99.0 5.8E-09 2E-13 106.6 16.7 125 76-262 13-139 (225)
76 2b25_A Hypothetical protein; s 99.0 2.6E-09 8.9E-14 113.8 14.2 110 72-235 99-219 (336)
77 2yxd_A Probable cobalt-precorr 99.0 2.4E-09 8.2E-14 101.7 11.8 127 73-263 30-156 (183)
78 2h1r_A Dimethyladenosine trans 99.0 2.4E-10 8.1E-15 120.9 5.3 134 63-238 27-162 (299)
79 3r3h_A O-methyltransferase, SA 99.0 1.1E-10 3.8E-15 119.4 2.8 148 42-238 25-173 (242)
80 3f4k_A Putative methyltransfer 99.0 4.5E-09 1.5E-13 106.3 14.5 113 74-240 42-155 (257)
81 3c3p_A Methyltransferase; NP_9 99.0 4.6E-10 1.6E-14 111.0 6.8 122 62-238 40-163 (210)
82 3dxy_A TRNA (guanine-N(7)-)-me 99.0 1.7E-09 5.7E-14 109.1 10.9 120 77-237 33-152 (218)
83 1dl5_A Protein-L-isoaspartate 99.0 2.4E-09 8.1E-14 113.6 12.5 108 71-235 68-175 (317)
84 2vdv_E TRNA (guanine-N(7)-)-me 99.0 2.9E-09 1E-13 108.3 12.4 139 76-260 47-194 (246)
85 2ipx_A RRNA 2'-O-methyltransfe 99.0 3.6E-09 1.2E-13 106.4 12.6 110 74-235 73-182 (233)
86 4gek_A TRNA (CMO5U34)-methyltr 99.0 3.4E-09 1.2E-13 110.0 12.5 112 76-237 68-180 (261)
87 3lec_A NADB-rossmann superfami 98.9 1.5E-08 5E-13 103.9 16.8 126 76-262 19-145 (230)
88 1g8a_A Fibrillarin-like PRE-rR 98.9 2.3E-09 7.9E-14 107.0 10.7 109 75-235 70-178 (227)
89 1nkv_A Hypothetical protein YJ 98.9 6.2E-09 2.1E-13 105.1 13.9 112 73-238 31-143 (256)
90 2esr_A Methyltransferase; stru 98.9 1.9E-09 6.5E-14 103.2 9.5 111 76-239 29-142 (177)
91 2bm8_A Cephalosporin hydroxyla 98.9 6E-10 2.1E-14 113.6 6.3 138 73-262 76-215 (236)
92 1sui_A Caffeoyl-COA O-methyltr 98.9 1.1E-09 3.9E-14 112.3 8.4 147 41-236 43-191 (247)
93 3tm4_A TRNA (guanine N2-)-meth 98.9 3.6E-09 1.2E-13 115.1 12.5 128 76-255 215-343 (373)
94 2nyu_A Putative ribosomal RNA 98.9 2.9E-09 9.8E-14 103.3 10.5 140 76-253 20-160 (196)
95 2pbf_A Protein-L-isoaspartate 98.9 2.8E-09 9.6E-14 106.3 10.4 112 75-235 77-193 (227)
96 3jwh_A HEN1; methyltransferase 98.9 5.6E-09 1.9E-13 103.4 12.5 144 75-268 26-196 (217)
97 3kkz_A Uncharacterized protein 98.9 5.3E-09 1.8E-13 107.0 12.7 114 75-242 43-157 (267)
98 1o9g_A RRNA methyltransferase; 98.9 3.2E-09 1.1E-13 108.1 10.7 126 77-238 50-217 (250)
99 2yvl_A TRMI protein, hypotheti 98.9 1.1E-08 3.8E-13 102.8 14.3 109 71-238 84-193 (248)
100 2okc_A Type I restriction enzy 98.9 2.6E-09 8.8E-14 118.8 10.6 168 56-253 149-328 (445)
101 2fhp_A Methylase, putative; al 98.9 2.8E-09 9.7E-14 102.2 9.4 117 76-240 42-159 (187)
102 4dcm_A Ribosomal RNA large sub 98.9 7.1E-09 2.4E-13 113.2 13.5 125 69-241 213-340 (375)
103 1ej0_A FTSJ; methyltransferase 98.9 3.3E-09 1.1E-13 99.5 9.4 132 76-253 20-151 (180)
104 1uwv_A 23S rRNA (uracil-5-)-me 98.9 1.1E-08 3.7E-13 113.5 15.1 88 74-189 282-369 (433)
105 2ih2_A Modification methylase 98.9 2.1E-09 7E-14 117.2 8.6 165 58-263 19-192 (421)
106 3gnl_A Uncharacterized protein 98.9 2.5E-08 8.7E-13 103.0 16.1 126 76-262 19-145 (244)
107 3ujc_A Phosphoethanolamine N-m 98.9 1.2E-08 4E-13 103.2 13.3 113 73-238 50-162 (266)
108 1r18_A Protein-L-isoaspartate( 98.9 3.7E-09 1.3E-13 105.9 9.2 110 75-236 81-195 (227)
109 3hem_A Cyclopropane-fatty-acyl 98.9 1.8E-08 6.2E-13 105.2 14.3 120 73-239 67-187 (302)
110 2yxe_A Protein-L-isoaspartate 98.9 1.3E-08 4.4E-13 100.4 12.5 109 72-237 71-179 (215)
111 2p41_A Type II methyltransfera 98.9 1.3E-09 4.5E-14 115.8 5.6 106 76-234 80-190 (305)
112 3dtn_A Putative methyltransfer 98.9 2.1E-08 7.2E-13 100.0 14.0 111 76-239 42-152 (234)
113 2nxc_A L11 mtase, ribosomal pr 98.9 1.3E-08 4.6E-13 104.5 12.8 123 76-262 118-240 (254)
114 1ws6_A Methyltransferase; stru 98.9 4.6E-09 1.6E-13 99.0 8.6 115 77-242 40-154 (171)
115 1fbn_A MJ fibrillarin homologu 98.9 8.7E-09 3E-13 103.7 11.1 108 74-234 70-177 (230)
116 3jwg_A HEN1, methyltransferase 98.9 1.7E-08 5.7E-13 99.9 12.9 144 75-268 26-196 (219)
117 1vl5_A Unknown conserved prote 98.8 8.4E-09 2.9E-13 104.9 10.8 111 72-236 31-141 (260)
118 2kw5_A SLR1183 protein; struct 98.8 4E-08 1.4E-12 95.8 15.1 107 76-238 28-134 (202)
119 3dmg_A Probable ribosomal RNA 98.8 1.2E-08 4.1E-13 111.7 12.6 114 77-240 232-345 (381)
120 3bus_A REBM, methyltransferase 98.8 3.1E-08 1.1E-12 101.1 14.8 113 73-238 56-169 (273)
121 3dlc_A Putative S-adenosyl-L-m 98.8 2.1E-08 7.2E-13 97.9 12.5 111 74-238 40-151 (219)
122 2h00_A Methyltransferase 10 do 98.8 5.2E-08 1.8E-12 99.0 15.9 157 78-262 65-237 (254)
123 1kpg_A CFA synthase;, cyclopro 98.8 2.9E-08 1E-12 102.4 14.2 112 73-238 59-171 (287)
124 1vbf_A 231AA long hypothetical 98.8 9.5E-09 3.3E-13 102.5 9.8 105 72-238 64-168 (231)
125 1jg1_A PIMT;, protein-L-isoasp 98.8 1.1E-08 3.7E-13 103.2 10.2 108 71-237 84-191 (235)
126 3ofk_A Nodulation protein S; N 98.8 2E-08 7E-13 98.9 12.0 138 72-263 45-188 (216)
127 2hnk_A SAM-dependent O-methylt 98.8 5.4E-09 1.8E-13 105.6 7.9 131 68-238 50-184 (239)
128 3sm3_A SAM-dependent methyltra 98.8 4.5E-08 1.5E-12 96.8 14.1 112 76-238 28-144 (235)
129 2o57_A Putative sarcosine dime 98.8 6.9E-08 2.4E-12 100.0 16.0 110 75-237 79-189 (297)
130 2xvm_A Tellurite resistance pr 98.8 2.6E-08 8.9E-13 96.2 12.0 109 73-234 27-135 (199)
131 1jsx_A Glucose-inhibited divis 98.8 1.9E-08 6.6E-13 98.4 11.1 103 78-237 65-167 (207)
132 1zq9_A Probable dimethyladenos 98.8 1.5E-09 5E-14 113.9 3.2 127 70-238 20-149 (285)
133 3g5l_A Putative S-adenosylmeth 98.8 5.3E-08 1.8E-12 98.4 14.6 108 74-237 40-147 (253)
134 3orh_A Guanidinoacetate N-meth 98.8 7E-09 2.4E-13 105.4 8.1 113 76-235 58-170 (236)
135 2avd_A Catechol-O-methyltransf 98.8 4.3E-09 1.5E-13 104.9 6.4 118 71-237 62-181 (229)
136 3lcc_A Putative methyl chlorid 98.8 2.9E-08 1E-12 99.4 11.9 130 79-263 67-204 (235)
137 2jjq_A Uncharacterized RNA met 98.8 3.4E-08 1.1E-12 109.7 13.4 79 76-189 288-366 (425)
138 3ou2_A SAM-dependent methyltra 98.8 1E-07 3.6E-12 93.2 15.5 109 73-238 41-149 (218)
139 1zx0_A Guanidinoacetate N-meth 98.8 7.3E-09 2.5E-13 104.3 7.4 115 76-237 58-172 (236)
140 3mgg_A Methyltransferase; NYSG 98.8 3.4E-08 1.2E-12 101.2 12.2 110 74-235 33-142 (276)
141 1xtp_A LMAJ004091AAA; SGPP, st 98.8 4.8E-08 1.6E-12 98.3 13.1 130 74-256 89-230 (254)
142 3cbg_A O-methyltransferase; cy 98.8 8.2E-09 2.8E-13 104.4 7.5 117 72-239 66-186 (232)
143 2ar0_A M.ecoki, type I restric 98.8 6.5E-09 2.2E-13 118.7 7.3 153 56-236 147-313 (541)
144 3e23_A Uncharacterized protein 98.8 6.1E-08 2.1E-12 95.3 13.2 126 73-257 38-175 (211)
145 3ckk_A TRNA (guanine-N(7)-)-me 98.8 1.9E-08 6.6E-13 102.6 9.8 120 76-237 44-170 (235)
146 3mq2_A 16S rRNA methyltransfer 98.7 6.2E-08 2.1E-12 95.9 13.0 115 73-235 22-140 (218)
147 1pjz_A Thiopurine S-methyltran 98.7 2.8E-08 9.5E-13 98.5 10.3 115 74-239 18-144 (203)
148 2fk8_A Methoxy mycolic acid sy 98.7 6E-08 2.1E-12 101.8 13.5 114 73-240 85-199 (318)
149 3hnr_A Probable methyltransfer 98.7 5.3E-08 1.8E-12 96.0 12.1 108 75-239 42-149 (220)
150 2ex4_A Adrenal gland protein A 98.7 6.1E-08 2.1E-12 97.6 12.6 131 76-257 77-218 (241)
151 2pjd_A Ribosomal RNA small sub 98.7 2.7E-08 9.3E-13 106.6 10.5 120 72-241 190-309 (343)
152 1ri5_A MRNA capping enzyme; me 98.7 7E-08 2.4E-12 99.3 13.2 115 76-238 62-177 (298)
153 3lkd_A Type I restriction-modi 98.7 4.4E-08 1.5E-12 111.9 12.5 180 56-263 195-388 (542)
154 1ve3_A Hypothetical protein PH 98.7 9.2E-08 3.2E-12 94.4 12.8 109 77-238 37-145 (227)
155 2xyq_A Putative 2'-O-methyl tr 98.7 1.5E-08 5E-13 107.3 7.3 123 73-254 58-187 (290)
156 2p35_A Trans-aconitate 2-methy 98.7 6E-08 2E-12 97.9 11.5 106 74-237 29-134 (259)
157 3gu3_A Methyltransferase; alph 98.7 1.7E-08 5.9E-13 104.6 7.4 112 73-237 17-128 (284)
158 1ne2_A Hypothetical protein TA 98.7 5.6E-08 1.9E-12 95.1 10.7 121 75-262 48-168 (200)
159 2pxx_A Uncharacterized protein 98.7 3.9E-08 1.3E-12 95.9 9.4 122 77-238 41-162 (215)
160 3m70_A Tellurite resistance pr 98.7 6.4E-08 2.2E-12 99.9 11.4 107 74-234 116-222 (286)
161 3q87_B N6 adenine specific DNA 98.7 1.8E-08 6.2E-13 97.0 6.8 120 77-256 22-141 (170)
162 2p8j_A S-adenosylmethionine-de 98.7 7.8E-08 2.7E-12 93.9 11.2 112 75-238 20-131 (209)
163 3l8d_A Methyltransferase; stru 98.7 1.1E-07 3.8E-12 94.9 12.2 106 76-238 51-156 (242)
164 3cgg_A SAM-dependent methyltra 98.7 2.9E-07 9.8E-12 88.0 14.5 128 76-262 44-171 (195)
165 3g5t_A Trans-aconitate 3-methy 98.7 8.3E-08 2.8E-12 100.0 11.5 115 77-237 35-151 (299)
166 2yqz_A Hypothetical protein TT 98.7 6.3E-08 2.2E-12 97.8 10.3 106 74-234 35-140 (263)
167 3ocj_A Putative exported prote 98.7 4.5E-08 1.5E-12 102.6 9.5 116 74-238 114-230 (305)
168 4fsd_A Arsenic methyltransfera 98.7 7.6E-08 2.6E-12 104.7 11.2 120 74-238 79-206 (383)
169 3h2b_A SAM-dependent methyltra 98.6 2.1E-07 7.1E-12 90.7 13.0 126 79-263 42-179 (203)
170 4htf_A S-adenosylmethionine-de 98.6 6.9E-08 2.3E-12 99.6 9.9 107 78-237 68-175 (285)
171 1wzn_A SAM-dependent methyltra 98.6 2.1E-07 7.3E-12 93.7 13.3 108 75-235 38-145 (252)
172 3i9f_A Putative type 11 methyl 98.6 1.1E-07 3.7E-12 90.1 10.3 104 74-239 13-116 (170)
173 3g07_A 7SK snRNA methylphospha 98.6 1.3E-07 4.3E-12 99.0 11.5 50 77-135 45-94 (292)
174 3khk_A Type I restriction-modi 98.6 1.2E-07 4E-12 108.5 12.0 180 55-255 222-418 (544)
175 1m6y_A S-adenosyl-methyltransf 98.6 4.2E-08 1.4E-12 104.2 7.6 90 73-188 21-110 (301)
176 3p2e_A 16S rRNA methylase; met 98.6 3.9E-08 1.3E-12 99.6 7.0 114 76-235 22-139 (225)
177 3adn_A Spermidine synthase; am 98.6 7.5E-08 2.6E-12 101.8 9.1 114 77-237 82-200 (294)
178 3uwp_A Histone-lysine N-methyl 98.6 2.1E-07 7E-12 102.9 11.9 111 73-234 168-287 (438)
179 2fyt_A Protein arginine N-meth 98.6 1.4E-07 4.9E-12 101.2 10.5 122 74-246 60-184 (340)
180 2y1w_A Histone-arginine methyl 98.6 1.7E-07 5.8E-12 100.8 10.8 125 74-251 46-173 (348)
181 1mjf_A Spermidine synthase; sp 98.6 8.8E-08 3E-12 100.1 8.3 112 77-238 74-196 (281)
182 3d2l_A SAM-dependent methyltra 98.6 2.6E-07 8.8E-12 92.2 11.4 109 76-237 31-139 (243)
183 3ccf_A Cyclopropane-fatty-acyl 98.6 1.4E-07 4.9E-12 97.0 9.8 107 72-238 51-157 (279)
184 3g2m_A PCZA361.24; SAM-depende 98.6 1.1E-07 3.7E-12 99.1 8.9 108 79-238 83-193 (299)
185 2vdw_A Vaccinia virus capping 98.6 2.6E-07 9E-12 97.7 11.8 118 77-237 47-171 (302)
186 1u2z_A Histone-lysine N-methyl 98.6 4.7E-07 1.6E-11 100.8 14.3 113 73-234 237-358 (433)
187 3thr_A Glycine N-methyltransfe 98.6 1.2E-07 3.9E-12 98.0 8.8 122 74-238 53-178 (293)
188 3q7e_A Protein arginine N-meth 98.5 1.4E-07 4.8E-12 101.6 9.2 119 76-245 64-185 (349)
189 1y8c_A S-adenosylmethionine-de 98.5 3.2E-07 1.1E-11 91.3 11.2 108 78-237 37-144 (246)
190 3bkw_A MLL3908 protein, S-aden 98.5 1.5E-07 5.2E-12 93.9 8.8 108 73-236 38-145 (243)
191 2p7i_A Hypothetical protein; p 98.5 3.2E-07 1.1E-11 91.1 11.2 102 77-237 41-143 (250)
192 3m33_A Uncharacterized protein 98.5 1.3E-07 4.5E-12 94.6 8.3 112 76-256 46-159 (226)
193 2i7c_A Spermidine synthase; tr 98.5 1.7E-07 5.9E-12 98.1 9.5 115 77-238 77-195 (283)
194 2gb4_A Thiopurine S-methyltran 98.5 5.5E-07 1.9E-11 92.9 13.1 136 75-264 65-225 (252)
195 3e8s_A Putative SAM dependent 98.5 2E-07 6.7E-12 91.5 9.2 106 75-237 49-154 (227)
196 3dli_A Methyltransferase; PSI- 98.5 4.9E-07 1.7E-11 90.9 12.2 124 75-256 38-176 (240)
197 2oxt_A Nucleoside-2'-O-methylt 98.5 6.3E-08 2.2E-12 100.9 5.6 106 76-237 72-187 (265)
198 1iy9_A Spermidine synthase; ro 98.5 5.3E-07 1.8E-11 94.1 12.5 113 78-237 75-191 (275)
199 3bxo_A N,N-dimethyltransferase 98.5 4.9E-07 1.7E-11 89.9 11.5 106 77-238 39-144 (239)
200 2o07_A Spermidine synthase; st 98.5 2.5E-07 8.6E-12 98.1 9.8 114 77-237 94-211 (304)
201 3iv6_A Putative Zn-dependent a 98.5 3.7E-07 1.3E-11 95.1 10.7 110 73-236 40-149 (261)
202 3r0q_C Probable protein argini 98.5 2.1E-07 7.1E-12 101.3 9.2 121 74-246 59-182 (376)
203 2wa2_A Non-structural protein 98.5 1E-07 3.5E-12 99.9 6.1 106 76-237 80-195 (276)
204 3bkx_A SAM-dependent methyltra 98.5 4.5E-07 1.5E-11 92.6 10.7 119 73-239 38-163 (275)
205 3ggd_A SAM-dependent methyltra 98.5 4.1E-07 1.4E-11 91.5 10.1 127 74-253 52-178 (245)
206 1g6q_1 HnRNP arginine N-methyl 98.5 3.1E-07 1E-11 98.0 9.3 127 76-253 36-165 (328)
207 2qfm_A Spermine synthase; sper 98.5 3.8E-07 1.3E-11 99.1 10.0 144 78-260 188-339 (364)
208 1xj5_A Spermidine synthase 1; 98.5 2.6E-07 8.9E-12 99.4 8.5 117 76-238 118-238 (334)
209 3bzb_A Uncharacterized protein 98.4 1.4E-06 4.8E-11 90.7 13.7 131 76-255 77-227 (281)
210 2pt6_A Spermidine synthase; tr 98.4 3E-07 1E-11 98.3 8.7 114 77-237 115-232 (321)
211 3bgv_A MRNA CAP guanine-N7 met 98.4 9.6E-07 3.3E-11 92.6 12.5 119 77-238 33-158 (313)
212 1qzz_A RDMB, aclacinomycin-10- 98.4 3.5E-06 1.2E-10 90.4 17.0 110 74-236 178-288 (374)
213 2aot_A HMT, histamine N-methyl 98.4 4.7E-07 1.6E-11 94.2 9.9 120 76-237 50-174 (292)
214 2a14_A Indolethylamine N-methy 98.4 6.1E-07 2.1E-11 92.2 10.5 117 75-236 52-198 (263)
215 3bwc_A Spermidine synthase; SA 98.4 3.5E-07 1.2E-11 96.7 8.7 133 77-255 94-231 (304)
216 3fzg_A 16S rRNA methylase; met 98.4 2.6E-07 8.8E-12 92.4 6.7 107 77-238 48-156 (200)
217 1uir_A Polyamine aminopropyltr 98.4 5.3E-07 1.8E-11 95.8 9.6 140 77-260 76-222 (314)
218 3b3j_A Histone-arginine methyl 98.4 4.4E-07 1.5E-11 102.2 9.2 121 75-248 155-278 (480)
219 3ege_A Putative methyltransfer 98.4 2.8E-07 9.6E-12 94.2 6.8 103 74-237 30-132 (261)
220 3pfg_A N-methyltransferase; N, 98.4 7.5E-07 2.6E-11 90.6 9.9 104 77-236 49-152 (263)
221 4hg2_A Methyltransferase type 98.4 3.4E-07 1.1E-11 94.9 7.3 103 78-241 39-141 (257)
222 2i62_A Nicotinamide N-methyltr 98.4 9.1E-07 3.1E-11 89.3 10.1 135 76-255 54-230 (265)
223 3gjy_A Spermidine synthase; AP 98.4 4.6E-07 1.6E-11 96.9 8.2 137 80-262 91-227 (317)
224 3ufb_A Type I restriction-modi 98.4 1.8E-06 6.1E-11 98.4 13.2 176 55-253 194-382 (530)
225 2b2c_A Spermidine synthase; be 98.4 5.7E-07 2E-11 95.9 8.4 137 77-260 107-248 (314)
226 2r3s_A Uncharacterized protein 98.4 8.1E-06 2.8E-10 85.9 16.9 111 77-239 164-275 (335)
227 3s1s_A Restriction endonucleas 98.3 5.8E-07 2E-11 106.0 8.5 192 46-263 282-496 (878)
228 3ll7_A Putative methyltransfer 98.3 4.5E-07 1.5E-11 100.2 7.2 83 77-189 92-176 (410)
229 2gs9_A Hypothetical protein TT 98.3 9.4E-07 3.2E-11 86.6 8.4 100 78-238 36-135 (211)
230 3i53_A O-methyltransferase; CO 98.3 1.6E-05 5.5E-10 84.1 18.5 112 75-239 166-278 (332)
231 1tw3_A COMT, carminomycin 4-O- 98.3 1.1E-05 3.8E-10 86.0 16.7 111 74-237 179-290 (360)
232 1x19_A CRTF-related protein; m 98.3 7.1E-06 2.4E-10 87.9 14.9 112 74-238 186-298 (359)
233 3dp7_A SAM-dependent methyltra 98.3 1.5E-05 5.1E-10 85.9 16.9 114 77-240 178-292 (363)
234 2avn_A Ubiquinone/menaquinone 98.3 1.3E-06 4.5E-11 89.1 8.1 102 78-238 54-155 (260)
235 3ldg_A Putative uncharacterize 98.3 7E-06 2.4E-10 90.0 14.2 92 73-187 189-311 (384)
236 1p91_A Ribosomal RNA large sub 98.3 1.3E-06 4.4E-11 89.1 7.7 98 77-238 84-181 (269)
237 3ldu_A Putative methylase; str 98.2 7.1E-06 2.4E-10 89.8 14.0 91 73-186 190-311 (385)
238 2g72_A Phenylethanolamine N-me 98.2 2.9E-06 9.8E-11 87.9 10.1 141 77-263 70-253 (289)
239 3k0b_A Predicted N6-adenine-sp 98.2 6.5E-06 2.2E-10 90.4 13.3 91 73-186 196-317 (393)
240 3htx_A HEN1; HEN1, small RNA m 98.2 4.3E-06 1.5E-10 98.9 11.9 114 75-238 718-837 (950)
241 1yub_A Ermam, rRNA methyltrans 98.2 9.5E-08 3.2E-12 97.4 -1.9 94 63-190 14-107 (245)
242 4hc4_A Protein arginine N-meth 98.2 2.6E-06 8.9E-11 93.2 8.8 118 77-246 82-202 (376)
243 2qy6_A UPF0209 protein YFCK; s 98.2 8.6E-06 3E-10 84.5 12.2 134 76-255 58-226 (257)
244 3gwz_A MMCR; methyltransferase 98.2 5.2E-05 1.8E-09 81.8 18.5 114 74-240 198-312 (369)
245 2cmg_A Spermidine synthase; tr 98.2 2.9E-06 1E-10 88.1 8.4 98 78-237 72-173 (262)
246 2ip2_A Probable phenazine-spec 98.2 1.5E-05 5E-10 84.3 13.8 111 75-239 165-276 (334)
247 2oyr_A UPF0341 protein YHIQ; a 98.2 3E-06 1E-10 88.1 8.3 126 71-258 79-215 (258)
248 3gru_A Dimethyladenosine trans 98.1 4.8E-06 1.6E-10 88.2 9.6 82 70-185 42-123 (295)
249 3cc8_A Putative methyltransfer 98.1 3.4E-06 1.2E-10 82.7 7.5 102 77-237 31-132 (230)
250 3mcz_A O-methyltransferase; ad 98.1 1.4E-05 4.8E-10 85.0 11.9 116 74-239 174-291 (352)
251 3hp7_A Hemolysin, putative; st 98.1 6.1E-06 2.1E-10 87.3 8.8 99 78-234 85-184 (291)
252 1vlm_A SAM-dependent methyltra 98.1 9.6E-06 3.3E-10 80.3 9.8 96 78-238 47-142 (219)
253 1qam_A ERMC' methyltransferase 98.1 8.7E-06 3E-10 83.2 9.3 66 72-150 24-89 (244)
254 3sso_A Methyltransferase; macr 98.1 5.3E-06 1.8E-10 91.4 8.0 104 78-236 216-325 (419)
255 2zfu_A Nucleomethylin, cerebra 98.1 5.2E-06 1.8E-10 81.7 7.3 115 72-262 61-175 (215)
256 3evf_A RNA-directed RNA polyme 98.1 2.6E-06 8.7E-11 89.2 5.2 136 76-260 72-208 (277)
257 2r6z_A UPF0341 protein in RSP 98.1 1.3E-06 4.4E-11 90.6 3.0 84 73-186 78-171 (258)
258 2px2_A Genome polyprotein [con 98.1 9.6E-07 3.3E-11 91.5 1.9 38 76-118 71-108 (269)
259 3v97_A Ribosomal RNA large sub 98.1 2.7E-05 9.3E-10 91.5 14.3 128 73-235 185-347 (703)
260 2qe6_A Uncharacterized protein 98.0 5.3E-05 1.8E-09 78.8 14.6 121 77-238 76-199 (274)
261 3eld_A Methyltransferase; flav 98.0 1.7E-05 5.8E-10 83.7 10.8 136 76-260 79-215 (300)
262 3opn_A Putative hemolysin; str 97.9 3.3E-06 1.1E-10 86.0 3.3 101 78-235 37-137 (232)
263 4auk_A Ribosomal RNA large sub 97.9 1.4E-05 4.9E-10 86.9 8.3 76 76-190 209-284 (375)
264 3gcz_A Polyprotein; flavivirus 97.9 3.2E-06 1.1E-10 88.6 2.8 111 76-234 88-200 (282)
265 3tqs_A Ribosomal RNA small sub 97.9 1.5E-05 5E-10 82.6 7.7 67 71-150 22-88 (255)
266 1af7_A Chemotaxis receptor met 97.9 3.8E-05 1.3E-09 80.4 10.6 112 78-234 105-251 (274)
267 3cvo_A Methyltransferase-like 97.9 8.6E-05 2.9E-09 74.6 12.0 131 77-252 29-169 (202)
268 4e2x_A TCAB9; kijanose, tetron 97.8 1.1E-05 3.9E-10 87.9 5.4 106 74-237 103-210 (416)
269 3lst_A CALO1 methyltransferase 97.8 9.1E-05 3.1E-09 79.1 12.1 109 74-238 180-289 (348)
270 3fut_A Dimethyladenosine trans 97.7 3.6E-05 1.2E-09 80.5 7.3 83 70-187 39-121 (271)
271 1wg8_A Predicted S-adenosylmet 97.7 2.7E-05 9.4E-10 81.8 5.7 85 73-188 17-101 (285)
272 4a6d_A Hydroxyindole O-methylt 97.7 0.00019 6.5E-09 77.1 11.7 114 74-240 175-288 (353)
273 3tka_A Ribosomal RNA small sub 97.6 5.9E-05 2E-09 81.2 5.8 89 73-188 52-140 (347)
274 3frh_A 16S rRNA methylase; met 97.5 0.00038 1.3E-08 71.9 11.3 106 77-238 104-210 (253)
275 3lcv_B Sisomicin-gentamicin re 97.5 0.00022 7.5E-09 74.5 9.5 109 77-238 131-240 (281)
276 3giw_A Protein of unknown func 97.5 0.00015 5E-09 76.2 8.0 118 79-238 79-203 (277)
277 3uzu_A Ribosomal RNA small sub 97.5 0.0002 7E-09 75.0 8.4 69 71-150 35-103 (279)
278 1fp1_D Isoliquiritigenin 2'-O- 97.4 0.00024 8.2E-09 76.5 8.7 103 76-238 207-309 (372)
279 3reo_A (ISO)eugenol O-methyltr 97.4 0.00033 1.1E-08 75.6 9.7 104 76-239 201-304 (368)
280 3r24_A NSP16, 2'-O-methyl tran 97.4 0.00017 5.7E-09 76.1 7.0 104 75-234 106-216 (344)
281 3ftd_A Dimethyladenosine trans 97.4 0.00013 4.3E-09 75.2 5.4 65 72-150 25-89 (249)
282 1fp2_A Isoflavone O-methyltran 97.3 0.00038 1.3E-08 74.3 8.7 104 75-238 185-291 (352)
283 3p9c_A Caffeic acid O-methyltr 97.3 0.00084 2.9E-08 72.4 10.8 104 76-239 199-302 (364)
284 2ld4_A Anamorsin; methyltransf 97.2 0.00021 7.1E-09 68.1 4.4 118 73-259 7-130 (176)
285 1qyr_A KSGA, high level kasuga 97.2 0.00016 5.4E-09 74.7 3.4 66 72-150 15-80 (252)
286 3o4f_A Spermidine synthase; am 97.1 0.0013 4.5E-08 69.6 10.0 117 70-234 76-197 (294)
287 3p8z_A Mtase, non-structural p 97.1 0.0026 9E-08 65.3 11.3 37 75-120 75-111 (267)
288 1zg3_A Isoflavanone 4'-O-methy 97.0 0.0013 4.6E-08 70.2 9.0 104 75-238 190-296 (358)
289 3c6k_A Spermine synthase; sper 97.0 0.0015 5.2E-08 71.4 9.2 144 78-261 205-357 (381)
290 4azs_A Methyltransferase WBDD; 96.9 0.001 3.6E-08 76.0 7.4 75 78-182 66-140 (569)
291 2wk1_A NOVP; transferase, O-me 96.9 0.0039 1.3E-07 65.6 10.5 136 79-263 107-271 (282)
292 3g7u_A Cytosine-specific methy 96.8 0.0047 1.6E-07 67.4 10.8 87 80-194 3-89 (376)
293 3lkz_A Non-structural protein 96.8 0.0049 1.7E-07 65.1 10.1 38 75-121 91-128 (321)
294 1g55_A DNA cytosine methyltran 96.6 0.0018 6E-08 69.7 5.9 83 80-193 3-85 (343)
295 4gqb_A Protein arginine N-meth 96.6 0.0046 1.6E-07 71.8 9.3 125 79-251 358-485 (637)
296 2c7p_A Modification methylase 96.6 0.0044 1.5E-07 66.3 8.6 79 79-194 11-89 (327)
297 3ua3_A Protein arginine N-meth 96.6 0.0031 1.1E-07 73.7 7.6 136 79-251 410-552 (745)
298 3vyw_A MNMC2; tRNA wobble urid 96.5 0.012 4.1E-07 62.6 11.3 133 77-260 95-244 (308)
299 2oo3_A Protein involved in cat 96.4 0.00079 2.7E-08 70.8 1.5 121 79-253 92-212 (283)
300 2zig_A TTHA0409, putative modi 95.6 0.023 7.9E-07 59.4 7.9 48 77-135 234-281 (297)
301 4h0n_A DNMT2; SAH binding, tra 94.9 0.025 8.7E-07 60.6 6.0 82 80-192 4-85 (333)
302 2qrv_A DNA (cytosine-5)-methyl 94.8 0.036 1.2E-06 58.4 6.6 86 76-192 13-99 (295)
303 3two_A Mannitol dehydrogenase; 94.7 0.068 2.3E-06 56.6 8.4 91 75-234 173-264 (348)
304 3s2e_A Zinc-containing alcohol 94.6 0.063 2.2E-06 56.6 7.9 100 74-234 162-262 (340)
305 3ubt_Y Modification methylase 94.5 0.063 2.1E-06 56.4 7.5 77 80-192 1-77 (331)
306 1f8f_A Benzyl alcohol dehydrog 94.5 0.068 2.3E-06 57.2 7.9 51 74-137 186-237 (371)
307 2py6_A Methyltransferase FKBM; 94.4 0.098 3.3E-06 57.4 9.1 68 72-146 220-291 (409)
308 4ej6_A Putative zinc-binding d 94.3 0.072 2.5E-06 57.2 7.6 105 74-234 178-283 (370)
309 3b5i_A S-adenosyl-L-methionine 94.3 0.17 5.8E-06 55.1 10.5 53 79-131 53-111 (374)
310 1pl8_A Human sorbitol dehydrog 94.3 0.078 2.7E-06 56.4 7.8 52 74-138 167-219 (356)
311 3qv2_A 5-cytosine DNA methyltr 94.2 0.036 1.2E-06 59.3 5.0 79 79-189 10-89 (327)
312 1g60_A Adenine-specific methyl 94.2 0.051 1.7E-06 55.7 5.9 49 76-135 210-258 (260)
313 2dph_A Formaldehyde dismutase; 94.0 0.14 4.9E-06 55.3 9.3 50 74-136 181-231 (398)
314 2efj_A 3,7-dimethylxanthine me 94.0 0.43 1.5E-05 52.1 13.0 42 79-120 53-102 (384)
315 3jv7_A ADH-A; dehydrogenase, n 93.9 0.09 3.1E-06 55.6 7.3 101 75-234 168-269 (345)
316 1i4w_A Mitochondrial replicati 93.7 0.093 3.2E-06 56.8 7.1 60 78-149 58-117 (353)
317 3fpc_A NADP-dependent alcohol 93.7 0.057 2E-06 57.3 5.4 103 74-234 162-265 (352)
318 3uko_A Alcohol dehydrogenase c 93.5 0.073 2.5E-06 57.2 5.7 52 74-138 189-241 (378)
319 4a2c_A Galactitol-1-phosphate 93.5 0.2 6.8E-06 52.7 9.0 52 74-138 156-208 (346)
320 3pvc_A TRNA 5-methylaminomethy 93.3 0.25 8.4E-06 57.5 10.2 141 77-260 57-229 (689)
321 1e3j_A NADP(H)-dependent ketos 93.2 0.16 5.6E-06 53.8 8.0 50 74-137 164-214 (352)
322 1p0f_A NADP-dependent alcohol 93.1 0.15 5E-06 54.6 7.4 52 74-138 187-239 (373)
323 3uog_A Alcohol dehydrogenase; 93.0 0.13 4.3E-06 55.0 6.7 51 74-138 185-236 (363)
324 1kol_A Formaldehyde dehydrogen 93.0 0.093 3.2E-06 56.7 5.7 50 74-136 181-231 (398)
325 2jhf_A Alcohol dehydrogenase E 93.0 0.14 4.8E-06 54.7 7.0 51 74-137 187-238 (374)
326 2fzw_A Alcohol dehydrogenase c 92.9 0.15 5.3E-06 54.3 7.3 52 74-138 186-238 (373)
327 1cdo_A Alcohol dehydrogenase; 92.9 0.14 4.6E-06 54.9 6.7 51 74-137 188-239 (374)
328 1uuf_A YAHK, zinc-type alcohol 92.8 0.18 6E-06 54.2 7.4 49 75-137 191-240 (369)
329 1e3i_A Alcohol dehydrogenase, 92.7 0.15 5.2E-06 54.5 6.8 51 74-137 191-242 (376)
330 2k4m_A TR8_protein, UPF0146 pr 92.0 0.14 4.8E-06 49.0 4.7 39 77-125 34-73 (153)
331 4dvj_A Putative zinc-dependent 91.6 0.19 6.6E-06 53.7 5.9 97 78-234 171-269 (363)
332 3m6i_A L-arabinitol 4-dehydrog 91.4 0.14 4.8E-06 54.4 4.6 47 74-129 175-222 (363)
333 1piw_A Hypothetical zinc-type 91.1 0.19 6.6E-06 53.5 5.3 51 74-138 175-226 (360)
334 4eez_A Alcohol dehydrogenase 1 91.0 0.37 1.3E-05 50.6 7.3 52 74-138 159-211 (348)
335 1vj0_A Alcohol dehydrogenase, 90.9 0.31 1E-05 52.4 6.7 52 74-138 190-243 (380)
336 3me5_A Cytosine-specific methy 90.8 0.24 8.1E-06 55.8 5.9 99 78-192 87-185 (482)
337 2h6e_A ADH-4, D-arabinose 1-de 90.8 0.23 7.8E-06 52.5 5.5 51 75-138 168-219 (344)
338 3goh_A Alcohol dehydrogenase, 90.6 0.23 7.8E-06 51.7 5.2 50 74-138 138-188 (315)
339 3ps9_A TRNA 5-methylaminomethy 90.1 1 3.4E-05 52.1 10.5 140 77-259 65-236 (676)
340 3ip1_A Alcohol dehydrogenase, 89.7 0.76 2.6E-05 49.7 8.6 50 75-137 210-260 (404)
341 3gms_A Putative NADPH:quinone 88.4 0.73 2.5E-05 48.5 7.1 50 74-137 140-191 (340)
342 1rjw_A ADH-HT, alcohol dehydro 88.3 0.87 3E-05 47.9 7.6 49 75-137 161-210 (339)
343 4dup_A Quinone oxidoreductase; 87.5 1.5 5.1E-05 46.5 8.9 52 74-137 163-214 (353)
344 2eih_A Alcohol dehydrogenase; 86.9 1.2 4.1E-05 46.9 7.7 50 74-137 162-213 (343)
345 3swr_A DNA (cytosine-5)-methyl 86.7 1.3 4.5E-05 54.0 8.7 92 79-193 540-635 (1002)
346 3fbg_A Putative arginate lyase 86.1 0.9 3.1E-05 47.9 6.2 46 78-137 150-197 (346)
347 2cf5_A Atccad5, CAD, cinnamyl 86.1 0.81 2.8E-05 48.6 5.9 51 75-138 176-228 (357)
348 1pqw_A Polyketide synthase; ro 86.0 0.98 3.3E-05 43.3 5.9 46 74-127 34-79 (198)
349 2d8a_A PH0655, probable L-thre 86.0 0.84 2.9E-05 48.1 5.9 50 74-137 164-214 (348)
350 2zig_A TTHA0409, putative modi 85.7 0.39 1.4E-05 50.0 3.1 60 175-236 39-98 (297)
351 3qwb_A Probable quinone oxidor 85.5 0.95 3.2E-05 47.4 6.0 50 74-137 144-195 (334)
352 3jyn_A Quinone oxidoreductase; 85.5 1.1 3.7E-05 46.8 6.4 50 74-137 136-187 (325)
353 4eye_A Probable oxidoreductase 85.2 0.97 3.3E-05 47.7 5.9 50 74-137 155-206 (342)
354 4ft4_B DNA (cytosine-5)-methyl 85.1 1.8 6.2E-05 51.0 8.8 49 78-130 211-259 (784)
355 1eg2_A Modification methylase 84.9 0.95 3.3E-05 48.0 5.7 49 76-135 240-291 (319)
356 1m6e_X S-adenosyl-L-methionnin 83.9 1 3.6E-05 48.7 5.5 138 79-238 52-212 (359)
357 1jvb_A NAD(H)-dependent alcoho 83.7 1.3 4.4E-05 46.7 6.1 51 74-137 166-218 (347)
358 4fs3_A Enoyl-[acyl-carrier-pro 83.5 3.6 0.00012 41.5 9.1 137 79-234 6-145 (256)
359 2j8z_A Quinone oxidoreductase; 83.5 3.1 0.00011 44.0 8.9 52 74-137 158-209 (354)
360 4b7c_A Probable oxidoreductase 83.3 1.5 5.2E-05 45.8 6.4 51 74-137 145-197 (336)
361 3k31_A Enoyl-(acyl-carrier-pro 83.2 4.4 0.00015 41.7 9.8 146 63-235 17-168 (296)
362 2c0c_A Zinc binding alcohol de 83.1 2 6.8E-05 45.7 7.2 50 74-137 159-210 (362)
363 1xa0_A Putative NADPH dependen 82.9 1.3 4.4E-05 46.2 5.6 51 74-138 144-197 (328)
364 3oig_A Enoyl-[acyl-carrier-pro 82.7 5.4 0.00018 39.8 10.0 135 79-235 7-147 (266)
365 2j3h_A NADP-dependent oxidored 82.7 1.4 4.7E-05 46.2 5.8 53 74-137 151-203 (345)
366 1boo_A Protein (N-4 cytosine-s 82.7 0.86 3E-05 48.1 4.2 50 76-136 250-299 (323)
367 1v3u_A Leukotriene B4 12- hydr 82.5 2.1 7.3E-05 44.6 7.1 52 74-137 141-192 (333)
368 1boo_A Protein (N-4 cytosine-s 81.8 1.3 4.3E-05 46.9 5.0 55 175-237 32-86 (323)
369 2dq4_A L-threonine 3-dehydroge 81.4 0.75 2.6E-05 48.4 3.1 46 73-128 160-206 (343)
370 1yqd_A Sinapyl alcohol dehydro 81.2 2 6.8E-05 45.7 6.4 51 75-137 183-234 (366)
371 3av4_A DNA (cytosine-5)-methyl 81.1 2.6 8.9E-05 52.8 8.2 96 78-192 850-945 (1330)
372 3krt_A Crotonyl COA reductase; 80.7 2.7 9.1E-05 46.2 7.4 51 74-138 224-276 (456)
373 3nx4_A Putative oxidoreductase 80.5 2.5 8.4E-05 43.9 6.7 50 75-138 142-194 (324)
374 2b5w_A Glucose dehydrogenase; 80.2 2.6 8.8E-05 44.6 6.8 52 74-137 162-224 (357)
375 1qor_A Quinone oxidoreductase; 80.2 1.9 6.4E-05 44.9 5.7 48 74-129 136-183 (327)
376 1wly_A CAAR, 2-haloacrylate re 80.1 3.6 0.00012 42.8 7.9 46 74-129 141-188 (333)
377 2hcy_A Alcohol dehydrogenase 1 79.6 1.3 4.3E-05 46.8 4.1 49 75-137 166-216 (347)
378 4dkj_A Cytosine-specific methy 79.4 1.8 6.2E-05 47.5 5.4 45 80-132 11-59 (403)
379 1xu9_A Corticosteroid 11-beta- 78.8 12 0.00041 37.8 11.1 62 79-148 28-89 (286)
380 1wma_A Carbonyl reductase [NAD 78.5 8.3 0.00028 38.0 9.6 134 79-236 4-139 (276)
381 4a0s_A Octenoyl-COA reductase/ 78.4 11 0.00039 40.8 11.5 50 74-138 216-268 (447)
382 1tt7_A YHFP; alcohol dehydroge 77.7 1.8 6E-05 45.2 4.5 50 75-138 146-198 (330)
383 1iz0_A Quinone oxidoreductase; 76.9 1.4 4.7E-05 45.5 3.3 48 76-137 123-172 (302)
384 3gaz_A Alcohol dehydrogenase s 76.3 4 0.00014 42.9 6.9 49 74-137 146-196 (343)
385 3tqh_A Quinone oxidoreductase; 75.1 12 0.00042 38.6 10.1 50 74-138 148-199 (321)
386 2p38_A Protein involved in rib 75.0 9.6 0.00033 36.7 8.5 134 503-674 17-156 (166)
387 2cdc_A Glucose dehydrogenase g 74.9 5.4 0.00019 42.2 7.5 52 73-137 166-229 (366)
388 1g60_A Adenine-specific methyl 74.7 2.3 7.7E-05 43.3 4.3 56 175-238 22-77 (260)
389 1sqw_A Saccharomyces cerevisia 74.3 2 6.7E-05 42.5 3.5 121 503-646 11-136 (188)
390 1yb5_A Quinone oxidoreductase; 73.5 4.3 0.00015 42.9 6.3 52 74-137 166-217 (351)
391 1ja9_A 4HNR, 1,3,6,8-tetrahydr 72.8 13 0.00043 36.9 9.2 133 79-235 21-155 (274)
392 3o26_A Salutaridine reductase; 72.1 57 0.0019 32.6 14.1 62 79-148 12-73 (311)
393 3grk_A Enoyl-(acyl-carrier-pro 70.7 21 0.00072 36.5 10.5 149 61-235 15-169 (293)
394 3tos_A CALS11; methyltransfera 70.2 8.1 0.00028 39.8 7.2 141 78-262 70-245 (257)
395 3pxx_A Carveol dehydrogenase; 70.0 21 0.00071 35.8 10.2 132 79-235 10-153 (287)
396 3gqv_A Enoyl reductase; medium 69.7 7.8 0.00027 41.2 7.2 47 77-138 163-211 (371)
397 2zb4_A Prostaglandin reductase 69.0 14 0.00049 38.6 9.1 54 74-137 154-209 (357)
398 3pi7_A NADH oxidoreductase; gr 69.0 8.4 0.00029 40.4 7.2 50 77-137 162-211 (349)
399 1zsy_A Mitochondrial 2-enoyl t 68.7 12 0.00042 39.3 8.5 55 74-138 163-219 (357)
400 1gu7_A Enoyl-[acyl-carrier-pro 68.3 10 0.00035 39.8 7.8 55 74-138 162-219 (364)
401 1eg2_A Modification methylase 67.5 5.5 0.00019 42.0 5.4 53 175-239 57-109 (319)
402 3tjr_A Short chain dehydrogena 67.1 26 0.0009 35.8 10.4 62 78-148 30-91 (301)
403 3gaf_A 7-alpha-hydroxysteroid 65.7 34 0.0011 34.0 10.6 133 79-235 12-146 (256)
404 2vn8_A Reticulon-4-interacting 65.4 10 0.00034 40.3 7.0 47 76-137 181-229 (375)
405 3ek2_A Enoyl-(acyl-carrier-pro 64.5 18 0.00062 35.7 8.3 135 77-235 12-153 (271)
406 4dry_A 3-oxoacyl-[acyl-carrier 64.4 28 0.00096 35.3 9.9 62 79-148 33-94 (281)
407 4a27_A Synaptic vesicle membra 64.2 2.8 9.6E-05 44.2 2.3 46 74-127 138-183 (349)
408 1fmc_A 7 alpha-hydroxysteroid 63.5 32 0.0011 33.5 9.8 61 79-148 11-71 (255)
409 3nyw_A Putative oxidoreductase 63.2 26 0.00088 34.8 9.2 134 79-235 7-144 (250)
410 4eso_A Putative oxidoreductase 63.0 18 0.0006 36.1 7.9 130 79-235 8-138 (255)
411 1mxh_A Pteridine reductase 2; 62.9 1E+02 0.0035 30.4 13.7 62 79-148 11-73 (276)
412 3o38_A Short chain dehydrogena 62.8 39 0.0013 33.5 10.4 134 79-235 22-160 (266)
413 3trk_A Nonstructural polyprote 61.6 5.6 0.00019 41.5 3.8 39 216-254 240-278 (324)
414 2hwk_A Helicase NSP2; rossman 61.6 4.8 0.00016 42.4 3.4 67 175-252 205-271 (320)
415 3pk0_A Short-chain dehydrogena 61.6 39 0.0013 33.7 10.2 62 79-148 10-71 (262)
416 3f1l_A Uncharacterized oxidore 59.2 37 0.0013 33.6 9.5 60 79-146 12-71 (252)
417 3lf2_A Short chain oxidoreduct 58.8 52 0.0018 32.7 10.6 133 79-234 8-144 (265)
418 4egf_A L-xylulose reductase; s 57.9 60 0.0021 32.3 10.9 133 79-235 20-157 (266)
419 3ojo_A CAP5O; rossmann fold, c 57.6 1.2E+02 0.0041 33.3 14.0 126 88-263 18-160 (431)
420 1xg5_A ARPG836; short chain de 57.6 62 0.0021 32.2 11.0 62 79-148 32-94 (279)
421 3rih_A Short chain dehydrogena 57.5 27 0.00091 35.8 8.3 62 79-148 41-102 (293)
422 3ioy_A Short-chain dehydrogena 57.4 68 0.0023 33.1 11.5 62 79-148 8-70 (319)
423 3is3_A 17BETA-hydroxysteroid d 56.7 57 0.002 32.5 10.5 134 79-236 18-153 (270)
424 3lyl_A 3-oxoacyl-(acyl-carrier 55.5 81 0.0028 30.6 11.2 61 79-148 5-65 (247)
425 4da9_A Short-chain dehydrogena 54.8 1.2E+02 0.0043 30.3 12.8 61 79-148 29-90 (280)
426 3h7a_A Short chain dehydrogena 53.3 57 0.0019 32.3 9.8 61 79-148 7-67 (252)
427 3ijr_A Oxidoreductase, short c 52.4 55 0.0019 33.2 9.6 133 79-235 47-182 (291)
428 2p91_A Enoyl-[acyl-carrier-pro 52.4 52 0.0018 33.0 9.4 133 79-235 21-160 (285)
429 3l77_A Short-chain alcohol deh 52.2 60 0.0021 31.3 9.6 61 80-148 3-63 (235)
430 3nzo_A UDP-N-acetylglucosamine 51.7 55 0.0019 34.9 9.9 63 79-148 35-100 (399)
431 3g79_A NDP-N-acetyl-D-galactos 51.3 94 0.0032 34.6 12.0 46 217-263 129-179 (478)
432 3ppi_A 3-hydroxyacyl-COA dehyd 50.9 1.1E+02 0.0036 30.5 11.4 76 58-148 10-87 (281)
433 3qiv_A Short-chain dehydrogena 50.8 62 0.0021 31.6 9.5 61 79-148 9-69 (253)
434 3rkr_A Short chain oxidoreduct 50.6 1E+02 0.0035 30.4 11.1 61 79-148 29-89 (262)
435 1geg_A Acetoin reductase; SDR 49.1 64 0.0022 31.8 9.3 59 81-148 4-62 (256)
436 2ae2_A Protein (tropinone redu 49.1 1.4E+02 0.0047 29.4 11.8 61 79-148 9-69 (260)
437 3sx2_A Putative 3-ketoacyl-(ac 48.9 84 0.0029 31.2 10.3 61 79-148 13-85 (278)
438 3r1i_A Short-chain type dehydr 48.8 84 0.0029 31.6 10.3 76 63-148 17-92 (276)
439 3i1j_A Oxidoreductase, short c 48.6 87 0.003 30.3 10.1 60 79-146 14-73 (247)
440 2pd4_A Enoyl-[acyl-carrier-pro 48.5 41 0.0014 33.6 7.9 133 79-235 6-144 (275)
441 3svt_A Short-chain type dehydr 48.3 88 0.003 31.3 10.3 62 79-148 11-74 (281)
442 2wyu_A Enoyl-[acyl carrier pro 48.3 42 0.0015 33.2 7.9 133 79-235 8-146 (261)
443 1xhl_A Short-chain dehydrogena 48.2 1E+02 0.0035 31.3 11.0 62 79-148 26-89 (297)
444 3v2h_A D-beta-hydroxybutyrate 47.4 80 0.0027 31.8 9.9 62 79-148 25-87 (281)
445 4gua_A Non-structural polyprot 47.4 16 0.00056 41.7 4.9 39 216-254 250-288 (670)
446 3v2g_A 3-oxoacyl-[acyl-carrier 47.2 1E+02 0.0035 30.8 10.6 134 79-236 31-166 (271)
447 3f9i_A 3-oxoacyl-[acyl-carrier 46.9 97 0.0033 30.1 10.2 60 77-148 12-71 (249)
448 3r3s_A Oxidoreductase; structu 46.7 64 0.0022 32.7 9.1 133 79-235 49-185 (294)
449 3tfo_A Putative 3-oxoacyl-(acy 46.6 93 0.0032 31.1 10.2 61 79-148 4-64 (264)
450 2pd6_A Estradiol 17-beta-dehyd 46.3 39 0.0013 33.1 7.1 62 79-148 7-74 (264)
451 3dmg_A Probable ribosomal RNA 46.1 29 0.001 37.3 6.6 52 175-253 100-151 (381)
452 2uvd_A 3-oxoacyl-(acyl-carrier 45.4 1.2E+02 0.0041 29.5 10.6 61 79-148 4-65 (246)
453 1yb1_A 17-beta-hydroxysteroid 45.4 1.3E+02 0.0045 29.8 11.1 61 79-148 31-91 (272)
454 3u5t_A 3-oxoacyl-[acyl-carrier 45.2 69 0.0024 32.0 9.0 134 79-236 27-162 (267)
455 3t4x_A Oxidoreductase, short c 45.0 1.6E+02 0.0055 29.1 11.6 62 79-148 10-72 (267)
456 1yxm_A Pecra, peroxisomal tran 44.7 97 0.0033 31.1 10.0 62 79-148 18-83 (303)
457 3sju_A Keto reductase; short-c 44.4 61 0.0021 32.6 8.4 61 79-148 24-84 (279)
458 1y1p_A ARII, aldehyde reductas 44.1 2.6E+02 0.0088 27.9 14.9 63 78-148 10-73 (342)
459 1w6u_A 2,4-dienoyl-COA reducta 43.9 74 0.0025 31.9 9.0 62 79-148 26-87 (302)
460 3pgx_A Carveol dehydrogenase; 43.7 65 0.0022 32.2 8.5 61 79-148 15-88 (280)
461 1qsg_A Enoyl-[acyl-carrier-pro 43.6 50 0.0017 32.7 7.5 133 79-235 9-148 (265)
462 4ibo_A Gluconate dehydrogenase 42.7 94 0.0032 31.1 9.5 61 79-148 26-86 (271)
463 1zem_A Xylitol dehydrogenase; 42.6 1.3E+02 0.0043 29.7 10.4 61 79-148 7-67 (262)
464 4fn4_A Short chain dehydrogena 42.4 1.2E+02 0.0042 30.6 10.3 61 79-148 7-67 (254)
465 3gg2_A Sugar dehydrogenase, UD 41.9 1.7E+02 0.0059 32.0 12.1 35 88-129 9-43 (450)
466 1edo_A Beta-keto acyl carrier 41.7 1.5E+02 0.0051 28.4 10.6 59 81-148 3-62 (244)
467 3cxt_A Dehydrogenase with diff 41.7 1.2E+02 0.0042 30.7 10.3 61 79-148 34-94 (291)
468 1g0o_A Trihydroxynaphthalene r 41.6 1.1E+02 0.0039 30.4 10.0 133 79-235 29-163 (283)
469 3rku_A Oxidoreductase YMR226C; 41.4 2.1E+02 0.0072 28.8 12.0 137 79-235 33-174 (287)
470 4a7p_A UDP-glucose dehydrogena 41.3 87 0.003 34.5 9.6 119 85-253 12-146 (446)
471 2bgk_A Rhizome secoisolaricire 40.9 78 0.0027 31.2 8.5 59 79-148 16-75 (278)
472 3afn_B Carbonyl reductase; alp 40.6 91 0.0031 30.1 8.8 61 79-148 7-68 (258)
473 1gee_A Glucose 1-dehydrogenase 40.5 1.3E+02 0.0043 29.3 9.9 61 79-148 7-68 (261)
474 3oid_A Enoyl-[acyl-carrier-pro 40.4 1.1E+02 0.0038 30.2 9.5 61 79-148 4-65 (258)
475 1h2b_A Alcohol dehydrogenase; 40.4 30 0.001 36.3 5.5 52 74-138 182-234 (359)
476 3ai3_A NADPH-sorbose reductase 39.9 1.5E+02 0.005 29.1 10.3 61 79-148 7-68 (263)
477 2ehd_A Oxidoreductase, oxidore 39.9 1E+02 0.0036 29.5 9.0 57 79-148 5-61 (234)
478 3tsc_A Putative oxidoreductase 39.6 1.6E+02 0.0055 29.2 10.7 61 79-148 11-84 (277)
479 4e6p_A Probable sorbitol dehyd 39.5 1.6E+02 0.0055 28.8 10.6 130 79-235 8-141 (259)
480 3oec_A Carveol dehydrogenase ( 39.1 1.6E+02 0.0053 30.2 10.7 132 79-234 46-193 (317)
481 3edm_A Short chain dehydrogena 38.9 64 0.0022 32.0 7.5 133 79-235 8-143 (259)
482 4fc7_A Peroxisomal 2,4-dienoyl 38.9 94 0.0032 31.1 8.8 62 79-148 27-88 (277)
483 3fwz_A Inner membrane protein 38.9 1.1E+02 0.0038 27.2 8.5 52 81-148 9-60 (140)
484 1iy8_A Levodione reductase; ox 38.9 1.7E+02 0.0057 28.9 10.6 62 79-148 13-75 (267)
485 2zat_A Dehydrogenase/reductase 38.8 1.7E+02 0.0059 28.6 10.6 61 79-148 14-74 (260)
486 1e7w_A Pteridine reductase; di 38.8 1.6E+02 0.0056 29.5 10.7 61 79-148 9-71 (291)
487 1wg8_A Predicted S-adenosylmet 38.7 19 0.00064 37.8 3.5 36 215-253 213-248 (285)
488 4dmm_A 3-oxoacyl-[acyl-carrier 38.6 1.7E+02 0.0059 29.0 10.7 133 79-235 28-164 (269)
489 2h7i_A Enoyl-[acyl-carrier-pro 38.4 46 0.0016 33.1 6.3 131 79-235 7-148 (269)
490 4dyv_A Short-chain dehydrogena 38.3 1.3E+02 0.0043 30.2 9.6 58 79-148 28-85 (272)
491 3ftp_A 3-oxoacyl-[acyl-carrier 38.0 1.7E+02 0.0059 29.1 10.6 61 79-148 28-88 (270)
492 3ucx_A Short chain dehydrogena 37.7 1.8E+02 0.006 28.7 10.6 61 79-148 11-71 (264)
493 4dqx_A Probable oxidoreductase 37.6 1.1E+02 0.0039 30.6 9.2 130 79-235 27-159 (277)
494 3imf_A Short chain dehydrogena 37.3 1.2E+02 0.0042 29.8 9.3 61 79-148 6-66 (257)
495 3t7c_A Carveol dehydrogenase; 37.3 2.1E+02 0.0073 28.8 11.3 61 79-148 28-100 (299)
496 2ph3_A 3-oxoacyl-[acyl carrier 37.1 1.9E+02 0.0064 27.6 10.4 60 81-148 3-63 (245)
497 3uve_A Carveol dehydrogenase ( 36.9 1.9E+02 0.0065 28.7 10.7 133 79-235 11-164 (286)
498 1xkq_A Short-chain reductase f 36.7 1.7E+02 0.0058 29.1 10.3 62 79-148 6-69 (280)
499 2pnf_A 3-oxoacyl-[acyl-carrier 36.6 1.8E+02 0.0062 27.8 10.2 61 79-148 7-68 (248)
500 2x9g_A PTR1, pteridine reducta 36.5 2.6E+02 0.0088 27.8 11.7 61 79-148 23-85 (288)
No 1
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=4.5e-52 Score=451.95 Aligned_cols=212 Identities=29% Similarity=0.396 Sum_probs=181.8
Q ss_pred hcccccCCCccccCCCCCcccccccchhhhcchhhHHHHHHHhhcccccCcEEEccccccchhhhcCCCCCCEEEeecCC
Q 004759 9 IEEGEVEPIRPLPWYPNNLAWHSNFSRMQLRKNQTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAA 88 (732)
Q Consensus 9 ~eg~~~~~~~~~pw~p~~la~~~~~~~~~lrk~~~l~~~~~~l~~~~~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAA 88 (732)
.+|..+..|.+.+|++....|...+.++.+.+.+. |......++.+++||++||+|+++|+++||++|||||||
T Consensus 85 ~~~~~~~~p~~~~~~~~~~l~~~~~~~g~~~~~p~------~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAa 158 (359)
T 4fzv_A 85 SEGGQSAAPSPASWACSPNLRCFTFDRGDISRFPP------ARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAA 158 (359)
T ss_dssp C-----CCSSCHHHHSCSSCCEEECCTTCCCCCCC------CCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCT
T ss_pred cccccccCCCcccccCCccceEEecCCCChhcCCC------cccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCC
Confidence 35666778888889877666666667766655444 344566889999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEecccccCCCCccCCCCCCCC
Q 004759 89 PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT------ANLIVTNHEAQHFPGCRANKNFSSAS 162 (732)
Q Consensus 89 PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~------~ni~Vt~~Da~~fp~~~~~~~~~~~~ 162 (732)
|||||+|||+++. .|.|+|+|++..|+..|++|++|++. .++.+++.|+..++..
T Consensus 159 PGGKT~~la~~~~---------~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~---------- 219 (359)
T 4fzv_A 159 PGGKTLALLQTGC---------CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL---------- 219 (359)
T ss_dssp TCHHHHHHHHTTC---------EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH----------
T ss_pred ccHHHHHHHHhcC---------CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh----------
Confidence 9999999998643 58999999999999999999999875 4788999998875421
Q ss_pred ccccccccccccccccEEEecCCCCCC--CccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCCC
Q 004759 163 DKGIESESNMGQLLFDRVLCDVPCSGD--GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 240 (732)
Q Consensus 163 ~~~~~~~~~~~~~~FDrVL~DvPCSGd--Gtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp 240 (732)
....||+||+||||||+ |++|++|++|++|++.....|+.+|.+||.+|+++|||||+|||||||++|
T Consensus 220 ----------~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 220 ----------EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp ----------STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred ----------ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 23679999999999998 788999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHCC
Q 004759 241 VENEAVVAEILRKCE 255 (732)
Q Consensus 241 ~ENEaVV~~~L~~~~ 255 (732)
+|||+||+++|++++
T Consensus 290 ~ENE~vV~~~L~~~~ 304 (359)
T 4fzv_A 290 LQNEYVVQGAIELLA 304 (359)
T ss_dssp TTTHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHHhCC
Confidence 999999999999765
No 2
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=3.5e-48 Score=436.30 Aligned_cols=378 Identities=23% Similarity=0.372 Sum_probs=286.7
Q ss_pred CccccCCCCCcccccccc-hhhhcchhhHHHHHHHhhcccccCcEEEccccccchhhhcCCC--CCCEEEeecCCCChHH
Q 004759 17 IRPLPWYPNNLAWHSNFS-RMQLRKNQTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQ--PDHFVLDMCAAPGSKT 93 (732)
Q Consensus 17 ~~~~pw~p~~la~~~~~~-~~~lrk~~~l~~~~~~l~~~~~~G~i~~Qd~~Smlp~llLd~~--pg~~VLDmCAAPGsKT 93 (732)
.+++||+|+++.+..... ...+.+ ...| ..|.+++||++||+++.+|+++ +|++|||||||||+||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-----~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt 132 (479)
T 2frx_A 64 LTPIPWCEEGFWIERDNEDALPLGS------TAEH-----LSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKT 132 (479)
T ss_dssp CCEETTEEEEEC---------CGGG------SHHH-----HTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHH
T ss_pred eeecCCCCceEEEecCcccccCccc------ChHH-----hCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHH
Confidence 568899999764321100 001222 2223 4599999999999999999999 9999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCCCCCCccccccccccc
Q 004759 94 FQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMG 173 (732)
Q Consensus 94 ~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~ 173 (732)
++||+.+++ .|.|+|+|+++.|+..+++|++++|+.++.++++|+..++.. .
T Consensus 133 ~~lA~~~~~--------~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~--------------------~ 184 (479)
T 2frx_A 133 TQISARMNN--------EGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAA--------------------V 184 (479)
T ss_dssp HHHHHHTTT--------CSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHH--------------------S
T ss_pred HHHHHhCCC--------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhh--------------------c
Confidence 999998753 589999999999999999999999999999999998765320 1
Q ss_pred cccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHH
Q 004759 174 QLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 253 (732)
Q Consensus 174 ~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~ 253 (732)
...||+||+||||||.|+++++|++++.|++.....++.+|.+||.+|+++|||||+|||||||++++|||+||+++|++
T Consensus 185 ~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~ 264 (479)
T 2frx_A 185 PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKET 264 (479)
T ss_dssp TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHH
T ss_pred cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHH
Confidence 25799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEecCccCCccccCCCcccceeccCCccccchhhhhhhhcccccCCCCCCCCCCCCcCCCCCCCCCccccCCcc
Q 004759 254 CEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIEPKHGNVTDVNSDE 333 (732)
Q Consensus 254 ~~~~velvd~s~~lP~L~~~pGl~~W~v~~~~~~~~~~~~~~~~~~~~~~~smfp~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (732)
+++.++++++...+| |...|
T Consensus 265 ~~~~~~~~~~~~~~~------~~~~~------------------------------------------------------ 284 (479)
T 2frx_A 265 YPDAVEFLPLGDLFP------GANKA------------------------------------------------------ 284 (479)
T ss_dssp STTTEEECCCTTSST------TGGGG------------------------------------------------------
T ss_pred CCCceeccccccccc------ccccc------------------------------------------------------
Confidence 987666655432111 10000
Q ss_pred ccchhhcccccCCchhhhhccccCCceEEEcccCCCCCceEEEEEEEcCCCCccccccCCcccccCCCCCCCCccccCCc
Q 004759 334 GLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPLPVVQEKHINPEEKMLPRNDDPPKKLQNQD 413 (732)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~l~rc~R~~Ph~q~TgGFFvAvl~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (732)
+..+.|+|++||.++|+|||||+|+|.++.+.... .
T Consensus 285 ---------------------~~~~g~~r~~P~~~~~dGfF~A~l~k~~~~~~~~~---~-------------------- 320 (479)
T 2frx_A 285 ---------------------LTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPA---P-------------------- 320 (479)
T ss_dssp ---------------------BCTTSCEEECTTTTTSCCEEEEEEEECSCCCCCCC---C--------------------
T ss_pred ---------------------cccCCeEEECCCCCCcCccEEEEEEEcCCCCCccc---c--------------------
Confidence 11247899999999999999999999764322000 0
Q ss_pred ccccccccccccCCCCCCCCCcccccccCCCCCCCCCCCCCCcccccCCcccccCCCcccccccCCCcccccccCCcccC
Q 004759 414 TEEVNGMEVDLADGTDEKDPEGSLEANSIDNEDGAAVEPDPLTCEKVDSEETEVPVNTETKSERTGGKRKLQIQGKWKGI 493 (732)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 493 (732)
+.+.+ .
T Consensus 321 -----------------------------------------------------------------~~~~~---------~ 326 (479)
T 2frx_A 321 -----------------------------------------------------------------KYKVG---------N 326 (479)
T ss_dssp -----------------------------------------------------------------CCCCC---------C
T ss_pred -----------------------------------------------------------------ccccc---------c
Confidence 00000 0
Q ss_pred CCcccCC--ChhhHHHHHhhhcCCCCCCCCCceEeecCCCCcceEEEEeCHHHHHHHHhccCCCCccEEEEceEeeEEEe
Q 004759 494 DPVIFFN--DETIINSIKTFYGIDDSFQLSGQLVSRNGDTNRVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQ 571 (732)
Q Consensus 494 dP~~f~~--d~~~~~~i~~fYgi~~~Fp~~~~l~~R~~~~~~~k~iy~~s~~v~~il~~n~~~g~~lkii~~GvK~F~rq 571 (732)
.||..+. ..+.|+.+.++|+++.. .+..++.|. +.||++.+....++ .+|||+..|+++.+..
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~p~~~~~~~-------~~lr~~r~G~~lg~~k 391 (479)
T 2frx_A 327 FPFSPVKDREAGQIRQAATGVGLNWD--ENLRLWQRD------KELWLFPVGIEALI-------GKVRFSRLGIKLAETH 391 (479)
T ss_dssp CSCEECCHHHHHHHHHHHHTTTBCCC--TTEEEEESS------SEEEEEEHHHHTTB-------TTBCCSEESEEEEEEE
T ss_pred CCccccchhhHHHHHHHHHHcCCCCC--CCceEEEEC------CEEEEeccccchhc-------cCcEEEecceEEEEEe
Confidence 1222221 22446777888988633 234677663 67999988765532 4699999999999876
Q ss_pred cCCCCCCcccceeeccCchhhhhhcccCcEEecCHHHHHHHhhcCCCCccCCCChHHHHHHhcCCCceEEEEEe
Q 004759 572 TSREGNSAPCSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVIVLS 645 (732)
Q Consensus 572 ~~~~~~~~~c~~Ri~~eGl~~l~p~~~~r~v~~~~~d~~~lL~~~~~~~~~~~~~~~~~~~~~l~~G~~vl~~~ 645 (732)
. =+||.++...-.+.+.-.++++.++.++....|..+.+....- ..-|-++|.++
T Consensus 392 k--------~rf~Ps~~la~~l~~~~~~~~~~l~~~~~~~yL~Ge~i~~~~~-----------~~~G~vlv~~~ 446 (479)
T 2frx_A 392 N--------KGYRWQHEAVIALASPDNMNAFELTPQEAEEWYRGRDVYPQAA-----------PVADDVLVTFQ 446 (479)
T ss_dssp T--------TEEEECHHHHHHHBCSSSSSEEECCHHHHHHHHTTCCCCCSSC-----------CSCSEEEEEET
T ss_pred c--------CCceEcHHHHHhcchhhcCcEEECCHHHHHHHhcCCCCcCCCC-----------CCCCEEEEEEC
Confidence 2 2899999999888777778899999999999998777654311 12477776665
No 3
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=5.3e-46 Score=415.80 Aligned_cols=358 Identities=23% Similarity=0.377 Sum_probs=268.7
Q ss_pred ccccCCCCCcccccccchhhhcchhhHHHHHHHhhcccccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHH
Q 004759 18 RPLPWYPNNLAWHSNFSRMQLRKNQTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLL 97 (732)
Q Consensus 18 ~~~pw~p~~la~~~~~~~~~lrk~~~l~~~~~~l~~~~~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLa 97 (732)
.++||+|+++. . ..+.+. ..| ..|.+++||.+||+++.+|++++|++|||||||||+||++||
T Consensus 62 ~~~~~~~~~~~---~---~~~~~~---~~~--------~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA 124 (456)
T 3m4x_A 62 QPAPYSNEGFL---G---TVNGKS---FLH--------QAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLA 124 (456)
T ss_dssp CBCTTCTTEEE---S---CCCTTS---HHH--------HTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHH
T ss_pred CCCCCCcceEE---c---CCCCCC---hHH--------hCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHH
Confidence 48999999763 1 112222 222 359999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCCCCCCccccccccccccccc
Q 004759 98 EIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLF 177 (732)
Q Consensus 98 e~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~F 177 (732)
+.+++ .|.|+|+|+++.|+..+++|++|+|..|+.+++.|+..++.. ....|
T Consensus 125 ~~~~~--------~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~--------------------~~~~F 176 (456)
T 3m4x_A 125 AQMKG--------KGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH--------------------FSGFF 176 (456)
T ss_dssp HHHTT--------CSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH--------------------HTTCE
T ss_pred HHcCC--------CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh--------------------ccccC
Confidence 98864 589999999999999999999999999999999998764320 12679
Q ss_pred cEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCCCc
Q 004759 178 DRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGS 257 (732)
Q Consensus 178 DrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~~~ 257 (732)
|+||+||||||.|++|++|+++..|++.....+..+|.+||.+|+++|||||+|||||||++|+|||+||.++|++++
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~-- 254 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYP-- 254 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS--
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred EEEEecCccCCccccCCCcccceeccCCccccchhhhhhhhcccccCCCCCCCCCCCCcCCCCCCCCCccccCCccccch
Q 004759 258 VELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIEPKHGNVTDVNSDEGLQQ 337 (732)
Q Consensus 258 velvd~s~~lP~L~~~pGl~~W~v~~~~~~~~~~~~~~~~~~~~~~~smfp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (732)
++++++.. .+++ .+|+..|... |
T Consensus 255 ~~l~~~~~-~~~~--~~~~~~~~~~-------------------------~----------------------------- 277 (456)
T 3m4x_A 255 VTIEEIPL-TQSV--SSGRSEWGSV-------------------------A----------------------------- 277 (456)
T ss_dssp EEEECCCC-SSCC--EECCGGGSSS-------------------------T-----------------------------
T ss_pred CEEEeccc-cccc--cccccccccc-------------------------c-----------------------------
Confidence 89888642 1211 2233333100 0
Q ss_pred hhcccccCCchhhhhccccCCceEEEcccCCCCCceEEEEEEEcCCCCccccccCCcccccCCCCCCCCccccCCccccc
Q 004759 338 VEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPLPVVQEKHINPEEKMLPRNDDPPKKLQNQDTEEV 417 (732)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~l~rc~R~~Ph~q~TgGFFvAvl~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (732)
.++.|+|++||.++|+|||||+|+|.+..+.. +..
T Consensus 278 ------------------~~~~~~r~~P~~~~~dGFF~A~l~k~~~~~~~------~~~--------------------- 312 (456)
T 3m4x_A 278 ------------------GLEKTIRIWPHKDQGEGHFVAKLTFHGQNQMH------KEK--------------------- 312 (456)
T ss_dssp ------------------TGGGSEEECTTTSSSSCEEEEEEEECSCCCCC------C-----------------------
T ss_pred ------------------ccCCeEEECCCCCCCcCeEEEEEEECCCCccc------ccc---------------------
Confidence 14579999999999999999999997652100 000
Q ss_pred ccccccccCCCCCCCCCcccccccCCCCCCCCCCCCCCcccccCCcccccCCCcccccccCCCcccccccCCcccCCCcc
Q 004759 418 NGMEVDLADGTDEKDPEGSLEANSIDNEDGAAVEPDPLTCEKVDSEETEVPVNTETKSERTGGKRKLQIQGKWKGIDPVI 497 (732)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~dP~~ 497 (732)
......+.+. .+
T Consensus 313 ---------------------------------------------------------~~~~~~~~~~---------~~-- 324 (456)
T 3m4x_A 313 ---------------------------------------------------------KTRKKSKVQM---------TK-- 324 (456)
T ss_dssp ----------------------------------------------------------------CSC---------CH--
T ss_pred ---------------------------------------------------------cccccccccC---------cH--
Confidence 0000000000 00
Q ss_pred cCCChhhHHHHHhhhcCCCCCCCCCceEeecCCCCcceEEEEeCHHHHHHHHhccCCCCccEEEEceEeeEEEecCCCCC
Q 004759 498 FFNDETIINSIKTFYGIDDSFQLSGQLVSRNGDTNRVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQTSREGN 577 (732)
Q Consensus 498 f~~d~~~~~~i~~fYgi~~~Fp~~~~l~~R~~~~~~~k~iy~~s~~v~~il~~n~~~g~~lkii~~GvK~F~rq~~~~~~ 577 (732)
...+.|+....-|++. + ...++.++ ..||++-....+ -.+|||+..|+++=+-..
T Consensus 325 --~~~~~~~~~~~~~~~~---~-~~~~~~~~------~~~~~~p~~~~~--------~~~l~~~r~G~~lg~~kk----- 379 (456)
T 3m4x_A 325 --EQEKLWTEFSNDFHYE---A-TGRLLVFN------DHLWEVPELAPS--------LDGLKVVRTGLHLGDFKK----- 379 (456)
T ss_dssp --HHHHHHHHHHHHTTCC---C-CSEEEEET------TEEEEECTTCCC--------CTTCCEEEESEEEEEEET-----
T ss_pred --HHHHHHHHHHHHhccC---C-CCceEEEC------CEEEEeccCccc--------ccCCeEEEcCceeeEEeC-----
Confidence 0112344444444442 2 23565543 689988765321 157999999999977542
Q ss_pred CcccceeeccCchhhhhhcccCcEEecCHHHHHHHhhcCCCCc
Q 004759 578 SAPCSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKF 620 (732)
Q Consensus 578 ~~~c~~Ri~~eGl~~l~p~~~~r~v~~~~~d~~~lL~~~~~~~ 620 (732)
=+|+.++...-.+.+--.++.+.++.++....|..+.+..
T Consensus 380 ---~~f~p~~~la~~l~~~~~~~~~~l~~~~~~~yl~ge~i~~ 419 (456)
T 3m4x_A 380 ---NRFEPSYALALATKKIENIPCLPITQKEWQSYTAGETFQR 419 (456)
T ss_dssp ---TEEEECHHHHHTCCCGGGSCEEEECHHHHHHHHHTCCEEC
T ss_pred ---CceeECHHHHHhcCccccCcEEEcCHHHHHHHhCCCCccc
Confidence 2788888877776665556789999999999998766543
No 4
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=5.9e-45 Score=388.92 Aligned_cols=181 Identities=26% Similarity=0.369 Sum_probs=149.4
Q ss_pred ccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC
Q 004759 56 EIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC 135 (732)
Q Consensus 56 ~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg 135 (732)
+.|.+++||.+||+++.+|++++|++|||||||||+||++||+++++ .|.|+|+|+++.|+..+++|++++|
T Consensus 80 ~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~--------~g~V~a~D~~~~~l~~~~~n~~r~g 151 (309)
T 2b9e_A 80 RAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKN--------QGKIFAFDLDAKRLASMATLLARAG 151 (309)
T ss_dssp HTTSEEECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTT--------CSEEEEEESCHHHHHHHHHHHHHTT
T ss_pred HCCeEEEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCC--------CCEEEEEeCCHHHHHHHHHHHHHcC
Confidence 35999999999999999999999999999999999999999998864 5899999999999999999999999
Q ss_pred CCceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhh--hcccccccchHHH
Q 004759 136 TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWR--KWNVGLGNGLHSL 213 (732)
Q Consensus 136 ~~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~--~ws~~~~~~L~~l 213 (732)
..++.+++.|+..++.. ......||+||+||||||.|+++++||+++ .|++.+...++.+
T Consensus 152 ~~~v~~~~~D~~~~~~~------------------~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~ 213 (309)
T 2b9e_A 152 VSCCELAEEDFLAVSPS------------------DPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGF 213 (309)
T ss_dssp CCSEEEEECCGGGSCTT------------------CGGGTTEEEEEECCCCCC------------------CCHHHHHHH
T ss_pred CCeEEEEeCChHhcCcc------------------ccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHH
Confidence 99999999998775421 001146999999999999999999999733 4678888999999
Q ss_pred HHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCCCcEEEEec
Q 004759 214 QVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 214 Q~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~~~velvd~ 263 (732)
|.+||.+|+++|+ ||+|||||||++++|||+||.++|+++++.++++++
T Consensus 214 Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~~~~~~~~~~ 262 (309)
T 2b9e_A 214 QQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPA 262 (309)
T ss_dssp HHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTSTTTEEECCC
T ss_pred HHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhCCCcEEEecc
Confidence 9999999999997 999999999999999999999999998766888764
No 5
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=3.3e-43 Score=375.37 Aligned_cols=246 Identities=32% Similarity=0.514 Sum_probs=197.4
Q ss_pred CccccCCCCCcccccccchhhhcchhhHHHHHHHhhcccccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHH
Q 004759 17 IRPLPWYPNNLAWHSNFSRMQLRKNQTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQL 96 (732)
Q Consensus 17 ~~~~pw~p~~la~~~~~~~~~lrk~~~l~~~~~~l~~~~~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qL 96 (732)
.+++||+|+++.+ ......+ .....| ..|.++.||.+||+++.+|++++|++|||+|||||+||++|
T Consensus 70 ~~~~~~~~~~~~~--~~~~~~~------~~~~~~-----~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~l 136 (315)
T 1ixk_A 70 FKRVPWAKEGFCL--TREPFSI------TSTPEF-----LTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYL 136 (315)
T ss_dssp EEEETTEEEEEEE--EECSSCG------GGSHHH-----HTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHH
T ss_pred eeECCCCCceEEE--eCCCCCc------ccChhH-----hcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHH
Confidence 3578999986532 1111112 233333 35999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCCCCCCcccccccccccccc
Q 004759 97 LEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLL 176 (732)
Q Consensus 97 ae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (732)
++.+++ .|.|+|+|+++.|+..++++++++|..++.++++|+..++.. ...
T Consensus 137 a~~~~~--------~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~---------------------~~~ 187 (315)
T 1ixk_A 137 AQLMRN--------DGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGEL---------------------NVE 187 (315)
T ss_dssp HHHTTT--------CSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGG---------------------CCC
T ss_pred HHHhCC--------CCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccc---------------------ccc
Confidence 998753 589999999999999999999999998999999998775421 257
Q ss_pred ccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCCC
Q 004759 177 FDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEG 256 (732)
Q Consensus 177 FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~~ 256 (732)
||+||+|+||||.|+++++|++++.|++.....++.+|.++|.+++++|||||+|||||||++++|||+||.++|++++
T Consensus 188 fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~- 266 (315)
T 1ixk_A 188 FDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFD- 266 (315)
T ss_dssp EEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS-
T ss_pred CCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred cEEEEecCccCCccccCCCcccceeccCCccccchhhhhhhhcccccCCCCCCCCCCCCcCCCCCCCCCccccCCccccc
Q 004759 257 SVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIEPKHGNVTDVNSDEGLQ 336 (732)
Q Consensus 257 ~velvd~s~~lP~L~~~pGl~~W~v~~~~~~~~~~~~~~~~~~~~~~~smfp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (732)
++++++.. ..+|+..|.... |.
T Consensus 267 -~~~~~~~~------~~~~~~~~~~~~-----------------------~~---------------------------- 288 (315)
T 1ixk_A 267 -VELLPLKY------GEPALTNPFGIE-----------------------LS---------------------------- 288 (315)
T ss_dssp -EEEECCCS------SEECCSSGGGCC-----------------------CC----------------------------
T ss_pred -CEEecCCc------cccCcccccccc-----------------------cc----------------------------
Confidence 88887631 224555553110 00
Q ss_pred hhhcccccCCchhhhhccccCCceEEEcccCCCCCceEEEEEEEc
Q 004759 337 QVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKV 381 (732)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~l~rc~R~~Ph~q~TgGFFvAvl~K~ 381 (732)
. .+++|+|++||.++|+|||||+|+|+
T Consensus 289 -------------~-----~~~~~~r~~P~~~~~dGfF~A~l~k~ 315 (315)
T 1ixk_A 289 -------------E-----EIKNARRLYPDVHETSGFFIAKIRKL 315 (315)
T ss_dssp -------------G-----GGGGSEEECTTTSSSCSEEEEEEEEC
T ss_pred -------------c-----ccCCEEEECCCCCCcccEEEEEEEEC
Confidence 0 14689999999999999999999984
No 6
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=3.4e-43 Score=393.68 Aligned_cols=205 Identities=32% Similarity=0.535 Sum_probs=178.0
Q ss_pred CCccccCCCCCcccccccchhhhcchhhHHHHHHHhhcccccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHH
Q 004759 16 PIRPLPWYPNNLAWHSNFSRMQLRKNQTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQ 95 (732)
Q Consensus 16 ~~~~~pw~p~~la~~~~~~~~~lrk~~~l~~~~~~l~~~~~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~q 95 (732)
..+++||+|+++.+.- ...+.+.+ .| ..|.++.||.+||+++.+|++++|++|||||||||+||++
T Consensus 53 ~~~~~~~~~~g~~l~~---~~~~~~~~------~~-----~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~ 118 (464)
T 3m6w_A 53 PLRPIPWCQEGFYYPE---EARPGPHP------FF-----YAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTH 118 (464)
T ss_dssp CCEEETTEEEEEECCT---TCCCSSSH------HH-----HTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHH
T ss_pred CceecCCCCceEEECC---CCCcccCh------HH-----hCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHH
Confidence 3578999999765321 11122222 22 3599999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCCCCCCccccccccccccc
Q 004759 96 LLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQL 175 (732)
Q Consensus 96 Lae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (732)
||+.+.+ .|.|+|+|+++.|+..+++|++++|.. +.+++.|+..++.. ...
T Consensus 119 LA~~~~~--------~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~--------------------~~~ 169 (464)
T 3m6w_A 119 LAARMGG--------KGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEA--------------------FGT 169 (464)
T ss_dssp HHHHTTT--------CSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHH--------------------HCS
T ss_pred HHHhCCC--------CCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhh--------------------ccc
Confidence 9998764 589999999999999999999999998 89999988764320 126
Q ss_pred cccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCC
Q 004759 176 LFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 255 (732)
Q Consensus 176 ~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~ 255 (732)
.||+||+||||||.|+++++|++...|++.....+..+|.+||..|+++|||||+|||||||++|+|||+||..+|++++
T Consensus 170 ~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~ 249 (464)
T 3m6w_A 170 YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHP 249 (464)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCT
T ss_pred cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCC
Confidence 79999999999999999999999889999999999999999999999999999999999999999999999999999986
Q ss_pred CcEEEEecC
Q 004759 256 GSVELVDVS 264 (732)
Q Consensus 256 ~~velvd~s 264 (732)
.++++++.
T Consensus 250 -~~~l~~~~ 257 (464)
T 3m6w_A 250 -EFRLEDAR 257 (464)
T ss_dssp -TEEEECCC
T ss_pred -CcEEEecc
Confidence 58888764
No 7
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.6e-39 Score=362.85 Aligned_cols=204 Identities=30% Similarity=0.448 Sum_probs=175.9
Q ss_pred CccccCCCCCcccccccchhhhcchhhHHHHHHHhhcccccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHH
Q 004759 17 IRPLPWYPNNLAWHSNFSRMQLRKNQTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQL 96 (732)
Q Consensus 17 ~~~~pw~p~~la~~~~~~~~~lrk~~~l~~~~~~l~~~~~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qL 96 (732)
..+.+|+|+++.+. .+..+...+. | ..|.++.||.+||+++.+|++++|++|||+|||||+||.+|
T Consensus 212 ~~~~~~~~~~~~~~---~~~~~~~~~~------~-----~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~l 277 (450)
T 2yxl_A 212 VVRSERVPTILKIK---GPYNFDTSSA------F-----NEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHL 277 (450)
T ss_dssp EEECSSCTTEEEEE---SCCCTTSCHH------H-----HTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHH
T ss_pred ceecCccCceEEeC---CCCCcccCch------h-----hCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHH
Confidence 35789999977553 2223333232 2 35999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCCCCCCcccccccccccccc
Q 004759 97 LEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLL 176 (732)
Q Consensus 97 ae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (732)
++.+.+ .|.|+|+|+++.|+..++++++++|..++.+++.|+..++.. .....
T Consensus 278 a~~~~~--------~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~-------------------~~~~~ 330 (450)
T 2yxl_A 278 AELMKN--------KGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI-------------------IGEEV 330 (450)
T ss_dssp HHHTTT--------CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS-------------------SCSSC
T ss_pred HHHcCC--------CCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh-------------------hccCC
Confidence 998753 489999999999999999999999999999999998775420 11256
Q ss_pred ccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCCC
Q 004759 177 FDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEG 256 (732)
Q Consensus 177 FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~~ 256 (732)
||+||+|+||||.|+++++|++++.|++.+...++.+|.++|.++.++|||||+|||||||++++|||++|..+|+++++
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~ 410 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPE 410 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSS
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCC
Confidence 99999999999999999999998889999999999999999999999999999999999999999999999999998753
Q ss_pred cEEEEe
Q 004759 257 SVELVD 262 (732)
Q Consensus 257 ~velvd 262 (732)
+++++
T Consensus 411 -~~~~~ 415 (450)
T 2yxl_A 411 -FKLVP 415 (450)
T ss_dssp -CEECC
T ss_pred -CEEee
Confidence 55544
No 8
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=4.5e-39 Score=336.08 Aligned_cols=179 Identities=35% Similarity=0.540 Sum_probs=148.8
Q ss_pred ccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC
Q 004759 56 EIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC 135 (732)
Q Consensus 56 ~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg 135 (732)
..|.++.|+.+|++++.+|++++|++|||+|||||++|.+|++.+.+ .+.|+|+|+++.|+..++++++++|
T Consensus 61 ~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~--------~~~v~avD~~~~~l~~~~~~~~~~g 132 (274)
T 3ajd_A 61 LFGYYMPQSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKN--------KGTIVAVEISKTRTKALKSNINRMG 132 (274)
T ss_dssp HTTSEEECCSGGGHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTT--------CSEEEEEESCHHHHHHHHHHHHHTT
T ss_pred hCCeEEEeCHHHHHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCC--------CCEEEEECCCHHHHHHHHHHHHHhC
Confidence 35999999999999999999999999999999999999999998653 4899999999999999999999999
Q ss_pred CCceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHH
Q 004759 136 TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQV 215 (732)
Q Consensus 136 ~~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~ 215 (732)
..++.++++|+..++.. .......||+||+|+||||.|+++++| .|+......+...|.
T Consensus 133 ~~~v~~~~~D~~~~~~~-----------------~~~~~~~fD~Vl~d~Pcs~~g~~~~~p----~~~~~~~~~~~~~~~ 191 (274)
T 3ajd_A 133 VLNTIIINADMRKYKDY-----------------LLKNEIFFDKILLDAPCSGNIIKDKNR----NVSEEDIKYCSLRQK 191 (274)
T ss_dssp CCSEEEEESCHHHHHHH-----------------HHHTTCCEEEEEEEECCC----------------HHHHTGGGTCHH
T ss_pred CCcEEEEeCChHhcchh-----------------hhhccccCCEEEEcCCCCCCcccccCC----CCCHHHHHHHHHHHH
Confidence 98999999998764310 000125799999999999999999987 577788888889999
Q ss_pred HHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCCCcEEEEecC
Q 004759 216 QIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVS 264 (732)
Q Consensus 216 ~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~~~velvd~s 264 (732)
++|.+++++|||||+|||||||++++|||+||.++|++++ .++++++.
T Consensus 192 ~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~-~~~~~~~~ 239 (274)
T 3ajd_A 192 ELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRN-DVELIIIK 239 (274)
T ss_dssp HHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCS-SEEEECCC
T ss_pred HHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhCC-CcEEecCc
Confidence 9999999999999999999999999999999999999875 68888764
No 9
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=1.4e-37 Score=344.80 Aligned_cols=196 Identities=32% Similarity=0.429 Sum_probs=168.4
Q ss_pred CccccCCCCCcccccccchhhhcchhhHHHHHHHhhcccccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHH
Q 004759 17 IRPLPWYPNNLAWHSNFSRMQLRKNQTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQL 96 (732)
Q Consensus 17 ~~~~pw~p~~la~~~~~~~~~lrk~~~l~~~~~~l~~~~~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qL 96 (732)
..+.+|+|+++.+.- ...+...+ .| ..|.++.||.+|++++.+|++++|++|||+|||||+||.++
T Consensus 199 ~~~~~~~~~~~~~~~---~~~~~~~~------~~-----~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~l 264 (429)
T 1sqg_A 199 GFPHADYPDAVRLET---PAPVHALP------GF-----EDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHI 264 (429)
T ss_dssp EECCTTCTTEEEESS---CCCGGGST------TG-----GGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHH
T ss_pred eeecCCCCCEEEECC---CCCcccCh------HH-----hCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHH
Confidence 357899999765421 12233322 22 45999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCCCCCCcccccccccccccc
Q 004759 97 LEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLL 176 (732)
Q Consensus 97 ae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (732)
++.+. .|.|+|+|+++.|+..++++++++|.. +.+.+.|+..++. ......
T Consensus 265 a~~~~---------~~~v~a~D~~~~~l~~~~~~~~~~g~~-~~~~~~D~~~~~~-------------------~~~~~~ 315 (429)
T 1sqg_A 265 LEVAP---------EAQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQ-------------------WCGEQQ 315 (429)
T ss_dssp HHHCT---------TCEEEEEESSTTTHHHHHHHHHHTTCC-CEEEECCTTCTHH-------------------HHTTCC
T ss_pred HHHcC---------CCEEEEECCCHHHHHHHHHHHHHcCCC-eEEEeCchhhchh-------------------hcccCC
Confidence 99853 489999999999999999999999974 6778888776431 011257
Q ss_pred ccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCC
Q 004759 177 FDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 255 (732)
Q Consensus 177 FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~ 255 (732)
||+||+|+||||.|+++++|++++.|++.+...++.+|.++|.+++++|||||+|||||||++|+|||.+|..+|++++
T Consensus 316 fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~ 394 (429)
T 1sqg_A 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA 394 (429)
T ss_dssp EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCT
T ss_pred CCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCC
Confidence 9999999999999999999999888999999999999999999999999999999999999999999999999999875
No 10
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.68 E-value=2.6e-16 Score=161.57 Aligned_cols=140 Identities=21% Similarity=0.228 Sum_probs=106.8
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
+.++||++|||+|||||++|.++++.++. +|.|+|+|+++.++..|.+.+++. .|+.+..+|+......
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~--------~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~- 140 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIEL--------NGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSY- 140 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTT--------TSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGT-
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCC--------CCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhh-
Confidence 45899999999999999999999999863 699999999999987777666553 6888899998752211
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHh-hccCCCEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGIS-LLKVGGRIV 232 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~-lLKpGGrLV 232 (732)
......||+|++|++- ..|.++|...++ +|||||+||
T Consensus 141 -----------------~~~~~~~D~I~~d~a~-------------------------~~~~~il~~~~~~~LkpGG~lv 178 (232)
T 3id6_C 141 -----------------KSVVENVDVLYVDIAQ-------------------------PDQTDIAIYNAKFFLKVNGDML 178 (232)
T ss_dssp -----------------TTTCCCEEEEEECCCC-------------------------TTHHHHHHHHHHHHEEEEEEEE
T ss_pred -----------------hccccceEEEEecCCC-------------------------hhHHHHHHHHHHHhCCCCeEEE
Confidence 0112579999999761 235566655444 999999999
Q ss_pred EE---cC---CCCCcCcHHHHHHHHHHCCCcEEEEecCccCC
Q 004759 233 YS---TC---SMNPVENEAVVAEILRKCEGSVELVDVSNEVP 268 (732)
Q Consensus 233 YS---TC---Slnp~ENEaVV~~~L~~~~~~velvd~s~~lP 268 (732)
+| +| +++|.||.+.+..+|++++ |++++.....|
T Consensus 179 isik~~~~d~t~~~~e~~~~~~~~L~~~g--f~~~~~~~l~p 218 (232)
T 3id6_C 179 LVIKARSIDVTKDPKEIYKTEVEKLENSN--FETIQIINLDP 218 (232)
T ss_dssp EEEC-------CCSSSSTTHHHHHHHHTT--EEEEEEEECTT
T ss_pred EEEccCCcccCCCHHHHHHHHHHHHHHCC--CEEEEEeccCC
Confidence 77 89 9999999999999999875 88877654444
No 11
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.67 E-value=1.1e-16 Score=176.14 Aligned_cols=161 Identities=18% Similarity=0.144 Sum_probs=126.4
Q ss_pred ccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC
Q 004759 56 EIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC 135 (732)
Q Consensus 56 ~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg 135 (732)
++|.+..|..+..+...+ +++|.+|||+|||+|++|++++.. + .. |+|+|+|+.++..+++|+++++
T Consensus 194 ~tG~f~dqr~~r~~l~~~--~~~g~~VLDlg~GtG~~sl~~a~~-g---------a~-V~avDis~~al~~a~~n~~~ng 260 (393)
T 4dmg_A 194 KTGYYLDQRENRRLFEAM--VRPGERVLDVYSYVGGFALRAARK-G---------AY-ALAVDKDLEALGVLDQAALRLG 260 (393)
T ss_dssp TTSSCGGGHHHHHHHHTT--CCTTCEEEEESCTTTHHHHHHHHT-T---------CE-EEEEESCHHHHHHHHHHHHHHT
T ss_pred ccCcCCCHHHHHHHHHHH--hcCCCeEEEcccchhHHHHHHHHc-C---------Ce-EEEEECCHHHHHHHHHHHHHhC
Confidence 578888888887766544 357999999999999999999874 1 24 9999999999999999999998
Q ss_pred CCceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHH
Q 004759 136 TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQV 215 (732)
Q Consensus 136 ~~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~ 215 (732)
..+ .+.++|+..+... . ...||+|++||||-..+ ..........+.
T Consensus 261 ~~~-~~~~~D~~~~l~~-------------------~-~~~fD~Ii~dpP~f~~~-------------~~~~~~~~~~~~ 306 (393)
T 4dmg_A 261 LRV-DIRHGEALPTLRG-------------------L-EGPFHHVLLDPPTLVKR-------------PEELPAMKRHLV 306 (393)
T ss_dssp CCC-EEEESCHHHHHHT-------------------C-CCCEEEEEECCCCCCSS-------------GGGHHHHHHHHH
T ss_pred CCC-cEEEccHHHHHHH-------------------h-cCCCCEEEECCCcCCCC-------------HHHHHHHHHHHH
Confidence 764 4557777654210 0 13399999999984322 112334566788
Q ss_pred HHHHHHHhhccCCCEEEEEcCCCCCcCcH--HHHHHHHHHCCCcEEEEec
Q 004759 216 QIAMRGISLLKVGGRIVYSTCSMNPVENE--AVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 216 ~IL~rAl~lLKpGGrLVYSTCSlnp~ENE--aVV~~~L~~~~~~velvd~ 263 (732)
+++..++++|||||+|+|+|||.++.+++ .+|..++.+.+..++++..
T Consensus 307 ~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~~~ 356 (393)
T 4dmg_A 307 DLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVHRV 356 (393)
T ss_dssp HHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEEEE
Confidence 99999999999999999999999999888 7888888877777777653
No 12
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.58 E-value=5.8e-15 Score=161.07 Aligned_cols=163 Identities=20% Similarity=0.174 Sum_probs=126.6
Q ss_pred ccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC
Q 004759 56 EIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC 135 (732)
Q Consensus 56 ~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg 135 (732)
.+|.+..|.....+.. +. ++.+|||+|||+|+++..++.. .+.|+|+|+++..+..+++|++.++
T Consensus 191 ~~g~f~~~~~~~~~~~---~~-~~~~VLDlg~G~G~~~~~la~~-----------~~~v~~vD~s~~~~~~a~~n~~~n~ 255 (382)
T 1wxx_A 191 KTGAYLDQRENRLYME---RF-RGERALDVFSYAGGFALHLALG-----------FREVVAVDSSAEALRRAEENARLNG 255 (382)
T ss_dssp CCCCCGGGHHHHHHGG---GC-CEEEEEEETCTTTHHHHHHHHH-----------EEEEEEEESCHHHHHHHHHHHHHTT
T ss_pred cCccccchHHHHHHHH---hc-CCCeEEEeeeccCHHHHHHHHh-----------CCEEEEEECCHHHHHHHHHHHHHcC
Confidence 3466666655544333 33 7899999999999999999886 2689999999999999999999999
Q ss_pred CCceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHH
Q 004759 136 TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQV 215 (732)
Q Consensus 136 ~~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~ 215 (732)
..++.+..+|+..+... .......||.|++|||+.+... .........+.
T Consensus 256 ~~~~~~~~~d~~~~~~~-----------------~~~~~~~fD~Ii~dpP~~~~~~-------------~~~~~~~~~~~ 305 (382)
T 1wxx_A 256 LGNVRVLEANAFDLLRR-----------------LEKEGERFDLVVLDPPAFAKGK-------------KDVERAYRAYK 305 (382)
T ss_dssp CTTEEEEESCHHHHHHH-----------------HHHTTCCEEEEEECCCCSCCST-------------TSHHHHHHHHH
T ss_pred CCCceEEECCHHHHHHH-----------------HHhcCCCeeEEEECCCCCCCCh-------------hHHHHHHHHHH
Confidence 98888999988764210 0001257999999999765331 12234456788
Q ss_pred HHHHHHHhhccCCCEEEEEcCCCCCcCc--HHHHHHHHHHCCCcEEEEec
Q 004759 216 QIAMRGISLLKVGGRIVYSTCSMNPVEN--EAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 216 ~IL~rAl~lLKpGGrLVYSTCSlnp~EN--EaVV~~~L~~~~~~velvd~ 263 (732)
+++..++++|+|||+|+|+|||.+..++ +.++..++.+.+..++++..
T Consensus 306 ~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~ 355 (382)
T 1wxx_A 306 EVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVEK 355 (382)
T ss_dssp HHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEc
Confidence 9999999999999999999999888775 67888888887777888764
No 13
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.52 E-value=2.6e-14 Score=167.86 Aligned_cols=180 Identities=12% Similarity=0.029 Sum_probs=128.6
Q ss_pred CccccCCCCCcccccccchhhhcchhhHHHHHHHhhcccccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHH
Q 004759 17 IRPLPWYPNNLAWHSNFSRMQLRKNQTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQL 96 (732)
Q Consensus 17 ~~~~pw~p~~la~~~~~~~~~lrk~~~l~~~~~~l~~~~~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qL 96 (732)
+.++++.++++.|.++.... .++|.+..|.....+...+ .+|.+|||+|||+|+.+.++
T Consensus 499 ~~~~~v~E~g~~~~v~~~~~------------------~~tG~f~d~r~~r~~l~~~---~~g~~VLDlg~GtG~~sl~a 557 (703)
T 3v97_A 499 GEFLEVTEYNAHLWVNLTDY------------------LDTGLFLDHRIARRMLGQM---SKGKDFLNLFSYTGSATVHA 557 (703)
T ss_dssp SCCEEEEETTEEEEECSSSS------------------SSCSCCGGGHHHHHHHHHH---CTTCEEEEESCTTCHHHHHH
T ss_pred CceEEEEECCEEEEEecccc------------------ccCCCcccHHHHHHHHHHh---cCCCcEEEeeechhHHHHHH
Confidence 44555666676666554321 2567777787766555443 36899999999999999998
Q ss_pred HHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC--ceEEEecccccCCCCccCCCCCCCCcccccccccccc
Q 004759 97 LEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQ 174 (732)
Q Consensus 97 ae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~--ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~ 174 (732)
+.. +...|+|+|+|+.++..+++|++++|.. ++.+.++|+..+.. ...
T Consensus 558 a~~----------ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~--------------------~~~ 607 (703)
T 3v97_A 558 GLG----------GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR--------------------EAN 607 (703)
T ss_dssp HHT----------TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHH--------------------HCC
T ss_pred HHC----------CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHH--------------------hcC
Confidence 762 1468999999999999999999999976 79999999876321 112
Q ss_pred ccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHC
Q 004759 175 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKC 254 (732)
Q Consensus 175 ~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~ 254 (732)
..||+|++||||.+.+.- ..........+.+++..++++|+|||+|++|||+-....++ ..|++.
T Consensus 608 ~~fD~Ii~DPP~f~~~~~-----------~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~----~~l~~~ 672 (703)
T 3v97_A 608 EQFDLIFIDPPTFSNSKR-----------MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL----DGLAKL 672 (703)
T ss_dssp CCEEEEEECCCSBC------------------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCH----HHHHHT
T ss_pred CCccEEEECCccccCCcc-----------chhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCH----HHHHHc
Confidence 679999999998764421 01123445678899999999999999999999996666664 445555
Q ss_pred CCcEEEEe
Q 004759 255 EGSVELVD 262 (732)
Q Consensus 255 ~~~velvd 262 (732)
+-.++.+.
T Consensus 673 g~~~~~i~ 680 (703)
T 3v97_A 673 GLKAQEIT 680 (703)
T ss_dssp TEEEEECT
T ss_pred CCceeeee
Confidence 53333443
No 14
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.51 E-value=2.3e-14 Score=156.89 Aligned_cols=165 Identities=15% Similarity=0.112 Sum_probs=124.9
Q ss_pred ccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC
Q 004759 56 EIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC 135 (732)
Q Consensus 56 ~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg 135 (732)
++|.+..|.....+...+ .++.+|||+|||+|+++..++.. ..+.|+|+|+++..+..+++|+++++
T Consensus 201 ~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~----------g~~~V~~vD~s~~al~~a~~n~~~ng 267 (396)
T 3c0k_A 201 KTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG----------GCSQVVSVDTSQEALDIARQNVELNK 267 (396)
T ss_dssp TTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHTT
T ss_pred cCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 346666666554443333 67899999999999999999874 13689999999999999999999999
Q ss_pred C-C-ceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHH
Q 004759 136 T-A-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSL 213 (732)
Q Consensus 136 ~-~-ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~l 213 (732)
. . ++.+...|+..+... .......||.|++|||+.+... .........
T Consensus 268 l~~~~v~~~~~D~~~~~~~-----------------~~~~~~~fD~Ii~dpP~~~~~~-------------~~~~~~~~~ 317 (396)
T 3c0k_A 268 LDLSKAEFVRDDVFKLLRT-----------------YRDRGEKFDVIVMDPPKFVENK-------------SQLMGACRG 317 (396)
T ss_dssp CCGGGEEEEESCHHHHHHH-----------------HHHTTCCEEEEEECCSSTTTCS-------------SSSSCCCTH
T ss_pred CCccceEEEECCHHHHHHH-----------------HHhcCCCCCEEEECCCCCCCCh-------------hHHHHHHHH
Confidence 8 6 899999988764210 0001257999999999765331 112223345
Q ss_pred HHHHHHHHHhhccCCCEEEEEcCCCCCc--CcHHHHHHHHHHCCCcEEEEec
Q 004759 214 QVQIAMRGISLLKVGGRIVYSTCSMNPV--ENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 214 Q~~IL~rAl~lLKpGGrLVYSTCSlnp~--ENEaVV~~~L~~~~~~velvd~ 263 (732)
+.+++..++++|+|||+|++|+|+.+.. +++.+|..++.+.+..++++..
T Consensus 318 ~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~ 369 (396)
T 3c0k_A 318 YKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQ 369 (396)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 6789999999999999999999998766 6688898888877767777754
No 15
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.50 E-value=3.5e-14 Score=155.41 Aligned_cols=164 Identities=17% Similarity=0.114 Sum_probs=121.3
Q ss_pred cCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC
Q 004759 57 IGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT 136 (732)
Q Consensus 57 ~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~ 136 (732)
+|.+..|.....+...+ .+++.+|||+|||+|+.+..++.. +.+.|+|+|+++..+..+++|+++++.
T Consensus 198 tg~f~~~~~~~~~~~~~--~~~~~~VLDl~~G~G~~~~~la~~----------g~~~v~~vD~s~~~l~~a~~n~~~n~~ 265 (396)
T 2as0_A 198 TGFFLDQRENRLALEKW--VQPGDRVLDVFTYTGGFAIHAAIA----------GADEVIGIDKSPRAIETAKENAKLNGV 265 (396)
T ss_dssp SCCCSTTHHHHHHHGGG--CCTTCEEEETTCTTTHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred cCccCCHHHHHHHHHHH--hhCCCeEEEecCCCCHHHHHHHHC----------CCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 35554454444333333 248999999999999999999864 136899999999999999999999998
Q ss_pred C-ceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHH
Q 004759 137 A-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQV 215 (732)
Q Consensus 137 ~-ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~ 215 (732)
. ++.+...|+..+... .......||.|++|||+.+... .........+.
T Consensus 266 ~~~v~~~~~d~~~~~~~-----------------~~~~~~~fD~Vi~dpP~~~~~~-------------~~~~~~~~~~~ 315 (396)
T 2as0_A 266 EDRMKFIVGSAFEEMEK-----------------LQKKGEKFDIVVLDPPAFVQHE-------------KDLKAGLRAYF 315 (396)
T ss_dssp GGGEEEEESCHHHHHHH-----------------HHHTTCCEEEEEECCCCSCSSG-------------GGHHHHHHHHH
T ss_pred CccceEEECCHHHHHHH-----------------HHhhCCCCCEEEECCCCCCCCH-------------HHHHHHHHHHH
Confidence 7 899999988764210 0001257999999999765321 11223345678
Q ss_pred HHHHHHHhhccCCCEEEEEcCCCCCcCc--HHHHHHHHHHCCCcEEEEe
Q 004759 216 QIAMRGISLLKVGGRIVYSTCSMNPVEN--EAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 216 ~IL~rAl~lLKpGGrLVYSTCSlnp~EN--EaVV~~~L~~~~~~velvd 262 (732)
+++..++++|+|||+|+|+||+.+..++ +.++..++...+..++++.
T Consensus 316 ~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~ 364 (396)
T 2as0_A 316 NVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKMLE 364 (396)
T ss_dssp HHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEESS
T ss_pred HHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEe
Confidence 8999999999999999999999776554 6778777777766677665
No 16
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.41 E-value=1.7e-12 Score=133.42 Aligned_cols=153 Identities=14% Similarity=0.178 Sum_probs=105.4
Q ss_pred ccchhhhcCCC-CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEec
Q 004759 67 SMVPPLFLDVQ-PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNH 144 (732)
Q Consensus 67 Smlp~llLd~~-pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~ 144 (732)
+++...++.++ ++.+|||+|||+|..+..++... .+.|+|+|+++..+..+++++++.+.. ++.+.+.
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~----------~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~ 106 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT----------KAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEY 106 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC----------CCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc----------CCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEEC
Confidence 55666677888 99999999999999999887651 249999999999999999999999876 5999999
Q ss_pred ccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCC-CccccChhhhhhcccccccchHHHHHHHHHHHHh
Q 004759 145 EAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD-GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGIS 223 (732)
Q Consensus 145 Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGd-Gtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~ 223 (732)
|+..++.. .....||.|++|+||... +.-.++++..+.. ...........++..+.+
T Consensus 107 D~~~~~~~-------------------~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~---a~~~~~~~~~~~l~~~~~ 164 (259)
T 3lpm_A 107 DLKKITDL-------------------IPKERADIVTCNPPYFATPDTSLKNTNEHFRI---ARHEVMCTLEDTIRVAAS 164 (259)
T ss_dssp CGGGGGGT-------------------SCTTCEEEEEECCCC--------------------------HHHHHHHHHHHH
T ss_pred cHHHhhhh-------------------hccCCccEEEECCCCCCCccccCCCCchHHHh---hhccccCCHHHHHHHHHH
Confidence 98775421 113689999999999776 3223333321111 011112334578999999
Q ss_pred hccCCCEEEEEcCCCCCcCcHHHHHHHHHHCC
Q 004759 224 LLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 255 (732)
Q Consensus 224 lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~ 255 (732)
+|||||++++.. +.+...-+..++++++
T Consensus 165 ~LkpgG~l~~~~----~~~~~~~~~~~l~~~~ 192 (259)
T 3lpm_A 165 LLKQGGKANFVH----RPERLLDIIDIMRKYR 192 (259)
T ss_dssp HEEEEEEEEEEE----CTTTHHHHHHHHHHTT
T ss_pred HccCCcEEEEEE----cHHHHHHHHHHHHHCC
Confidence 999999999942 3455555667777765
No 17
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.40 E-value=5.1e-13 Score=143.65 Aligned_cols=164 Identities=15% Similarity=0.080 Sum_probs=112.2
Q ss_pred ccCcEEEccccccchhhhcC-CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc
Q 004759 56 EIGNITRQEAVSMVPPLFLD-VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM 134 (732)
Q Consensus 56 ~~G~i~~Qd~~Smlp~llLd-~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl 134 (732)
++|.+..|..........+. ..++.+|||+|||+|+.+..++.. ...|+++|+|+..+..+++|++.+
T Consensus 130 ~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~-----------ga~V~~VD~s~~al~~a~~n~~~~ 198 (332)
T 2igt_A 130 HVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA-----------GAEVTHVDASKKAIGWAKENQVLA 198 (332)
T ss_dssp CCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT-----------TCEEEEECSCHHHHHHHHHHHHHH
T ss_pred cceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHHHHHc
Confidence 34666666655433333333 457889999999999999998763 238999999999999999999999
Q ss_pred CCCc--eEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHH
Q 004759 135 CTAN--LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHS 212 (732)
Q Consensus 135 g~~n--i~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~ 212 (732)
+..+ +.+.+.|+..+... .......||.|++|+||.+.+.- ........
T Consensus 199 gl~~~~v~~i~~D~~~~l~~-----------------~~~~~~~fD~Ii~dPP~~~~~~~------------~~~~~~~~ 249 (332)
T 2igt_A 199 GLEQAPIRWICEDAMKFIQR-----------------EERRGSTYDIILTDPPKFGRGTH------------GEVWQLFD 249 (332)
T ss_dssp TCTTSCEEEECSCHHHHHHH-----------------HHHHTCCBSEEEECCCSEEECTT------------CCEEEHHH
T ss_pred CCCccceEEEECcHHHHHHH-----------------HHhcCCCceEEEECCccccCCch------------HHHHHHHH
Confidence 8864 88998888764210 00012579999999998775521 01123345
Q ss_pred HHHHHHHHHHhhccCCCE-EEEEcCCCCCcC--cHHHHHHHHHHCCCcEE
Q 004759 213 LQVQIAMRGISLLKVGGR-IVYSTCSMNPVE--NEAVVAEILRKCEGSVE 259 (732)
Q Consensus 213 lQ~~IL~rAl~lLKpGGr-LVYSTCSlnp~E--NEaVV~~~L~~~~~~ve 259 (732)
.+.+++..++++|+|||. ++.++|+....+ -+.++..++++.+..++
T Consensus 250 ~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 250 HLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp HHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred HHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 567899999999999999 556667754321 23344444445555454
No 18
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.39 E-value=6.3e-13 Score=145.46 Aligned_cols=141 Identities=13% Similarity=0.083 Sum_probs=106.6
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC--ceEEEecccccCCCCcc
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~--ni~Vt~~Da~~fp~~~~ 154 (732)
.+|.+|||+|||+|+.+..+|.. + .+.|+++|+++..+..+++|++.++.. ++.+..+|+..+...
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-g---------a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~-- 278 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-G---------AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKY-- 278 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-T---------BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHH--
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-C---------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHH--
Confidence 67899999999999999998763 1 358999999999999999999999986 899999998763210
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
.......||.|++|||+.+.+. .........+.+++..++++|+|||.|++|
T Consensus 279 ---------------~~~~~~~fD~Ii~DPP~~~~~~-------------~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~ 330 (385)
T 2b78_A 279 ---------------ARRHHLTYDIIIIDPPSFARNK-------------KEVFSVSKDYHKLIRQGLEILSENGLIIAS 330 (385)
T ss_dssp ---------------HHHTTCCEEEEEECCCCC------------------CCCCHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ---------------HHHhCCCccEEEECCCCCCCCh-------------hhHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 0011247999999999865320 112234456678999999999999999999
Q ss_pred cCCCCC--cCcHHHHHHHHHHCCCc
Q 004759 235 TCSMNP--VENEAVVAEILRKCEGS 257 (732)
Q Consensus 235 TCSlnp--~ENEaVV~~~L~~~~~~ 257 (732)
+|+-.. .+...++..++.+.+..
T Consensus 331 ~~~~~~~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 331 TNAANMTVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp ECCTTSCHHHHHHHHHHHHTTCCCE
T ss_pred eCCCcCCHHHHHHHHHHHHHHcCCc
Confidence 999765 44456777777766543
No 19
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.38 E-value=4.1e-12 Score=125.02 Aligned_cols=135 Identities=21% Similarity=0.178 Sum_probs=108.7
Q ss_pred hhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCC
Q 004759 71 PLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 150 (732)
Q Consensus 71 ~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp 150 (732)
...++++++.+|||+|||+|..+..++... +.+.|+|+|+++.++..+++++++.+..++.+...|+....
T Consensus 33 l~~l~~~~~~~vLDiG~G~G~~~~~la~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 103 (204)
T 3e05_A 33 LSKLRLQDDLVMWDIGAGSASVSIEASNLM---------PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL 103 (204)
T ss_dssp HHHTTCCTTCEEEEETCTTCHHHHHHHHHC---------TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC
T ss_pred HHHcCCCCCCEEEEECCCCCHHHHHHHHHC---------CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh
Confidence 345688999999999999999999998872 35899999999999999999999999888999988875432
Q ss_pred CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCE
Q 004759 151 GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR 230 (732)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGr 230 (732)
. ....||.|+++.+.. ...+++..+.++|||||+
T Consensus 104 ~---------------------~~~~~D~i~~~~~~~-------------------------~~~~~l~~~~~~LkpgG~ 137 (204)
T 3e05_A 104 D---------------------DLPDPDRVFIGGSGG-------------------------MLEEIIDAVDRRLKSEGV 137 (204)
T ss_dssp T---------------------TSCCCSEEEESCCTT-------------------------CHHHHHHHHHHHCCTTCE
T ss_pred h---------------------cCCCCCEEEECCCCc-------------------------CHHHHHHHHHHhcCCCeE
Confidence 1 115699999976521 123688999999999999
Q ss_pred EEEEcCCCCCcCcHHHHHHHHHHCCCcEEEEec
Q 004759 231 IVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 231 LVYSTCSlnp~ENEaVV~~~L~~~~~~velvd~ 263 (732)
|++++++. ++...+...+++.+..++++.+
T Consensus 138 l~~~~~~~---~~~~~~~~~l~~~g~~~~~~~~ 167 (204)
T 3e05_A 138 IVLNAVTL---DTLTKAVEFLEDHGYMVEVACV 167 (204)
T ss_dssp EEEEECBH---HHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEeccc---ccHHHHHHHHHHCCCceeEEEE
Confidence 99998876 6777888889888755555543
No 20
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.37 E-value=3.3e-12 Score=133.34 Aligned_cols=129 Identities=22% Similarity=0.299 Sum_probs=105.1
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~Vt~~Da~~fp~~~~ 154 (732)
+++|.+|||+|||+|+.+..++... ...|+|+|+++..+..+++|++.++..+ +.+.++|+..++.
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~----------~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--- 189 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYG----------KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--- 189 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT----------CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC---
T ss_pred CCCCCEEEEecccCCHHHHHHHHhC----------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc---
Confidence 5789999999999999999998762 1279999999999999999999999875 8899999877542
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
...||+|++|+|++. .+++..++++|||||+++++
T Consensus 190 -------------------~~~fD~Vi~~~p~~~--------------------------~~~l~~~~~~LkpgG~l~~~ 224 (278)
T 2frn_A 190 -------------------ENIADRILMGYVVRT--------------------------HEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp -------------------CSCEEEEEECCCSSG--------------------------GGGHHHHHHHEEEEEEEEEE
T ss_pred -------------------cCCccEEEECCchhH--------------------------HHHHHHHHHHCCCCeEEEEE
Confidence 267999999998433 23577889999999999999
Q ss_pred cCCC---CCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 235 TCSM---NPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 235 TCSl---np~ENEaVV~~~L~~~~~~velvd 262 (732)
+|+- ...+....+..++++.+..++.+.
T Consensus 225 ~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~ 255 (278)
T 2frn_A 225 NTVPEKLMPREPFETFKRITKEYGYDVEKLN 255 (278)
T ss_dssp EEEEGGGTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred EeeccccccccHHHHHHHHHHHcCCeeEEee
Confidence 9984 244556777888888887776644
No 21
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.36 E-value=2.1e-13 Score=149.30 Aligned_cols=122 Identities=17% Similarity=0.117 Sum_probs=96.1
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc---------------CCCceEEE
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM---------------CTANLIVT 142 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl---------------g~~ni~Vt 142 (732)
++.+|||+|||+|.+++.++..++ ...|+|+|+++.++.++++|++++ +..++.++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~---------~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~ 117 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP---------AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVIN 117 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS---------CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEE
T ss_pred CCCEEEECCCchhHHHHHHHHhCC---------CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEE
Confidence 688999999999999999998753 357999999999999999999999 87778899
Q ss_pred ecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHH
Q 004759 143 NHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGI 222 (732)
Q Consensus 143 ~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl 222 (732)
+.|+..+... ....||+|++||||+. ..+|..|+
T Consensus 118 ~~Da~~~~~~--------------------~~~~fD~I~lDP~~~~--------------------------~~~l~~a~ 151 (378)
T 2dul_A 118 HDDANRLMAE--------------------RHRYFHFIDLDPFGSP--------------------------MEFLDTAL 151 (378)
T ss_dssp ESCHHHHHHH--------------------STTCEEEEEECCSSCC--------------------------HHHHHHHH
T ss_pred cCcHHHHHHh--------------------ccCCCCEEEeCCCCCH--------------------------HHHHHHHH
Confidence 9998764210 0246999999999763 25788999
Q ss_pred hhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCC
Q 004759 223 SLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 255 (732)
Q Consensus 223 ~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~ 255 (732)
++||+|| ++|.||+-....+.......+++++
T Consensus 152 ~~lk~gG-~l~vt~td~~~l~~~~~~~~~~~yg 183 (378)
T 2dul_A 152 RSAKRRG-ILGVTATDGAPLCGAHPRACLRKYL 183 (378)
T ss_dssp HHEEEEE-EEEEEECCHHHHTTSSHHHHHHHHS
T ss_pred HhcCCCC-EEEEEeecchhhccccHHHHHHHcc
Confidence 9999999 7888997544333233455566665
No 22
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.36 E-value=4.5e-12 Score=133.39 Aligned_cols=130 Identities=23% Similarity=0.328 Sum_probs=103.1
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~Vt~~Da~~fp~~~~ 154 (732)
+++|++|||||||.|++++.+|.. +...|+|+|+|+..+..|++|++++++.+ +.+.++|+..|+.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~----------g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~--- 189 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY----------GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--- 189 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH----------TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC---
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh----------cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc---
Confidence 689999999999999999998865 24689999999999999999999999865 8899999988652
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
...||+|++|+|++.. ..|..|+++||+||.|.|.
T Consensus 190 -------------------~~~~D~Vi~~~p~~~~--------------------------~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 190 -------------------ENIADRILMGYVVRTH--------------------------EFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp -------------------CSCEEEEEECCCSSGG--------------------------GGHHHHHHHEEEEEEEEEE
T ss_pred -------------------ccCCCEEEECCCCcHH--------------------------HHHHHHHHHcCCCCEEEEE
Confidence 2679999999996642 2356788999999998653
Q ss_pred -cC--CCCCcCcHHHHHHHHHHCCCcEEEEec
Q 004759 235 -TC--SMNPVENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 235 -TC--Slnp~ENEaVV~~~L~~~~~~velvd~ 263 (732)
.+ ...+.+-...+..+.+..+..++.+.+
T Consensus 225 ~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~~~ 256 (278)
T 3k6r_A 225 NTVPEKLMPREPFETFKRITKEYGYDVEKLNE 256 (278)
T ss_dssp EEEEGGGTTTTTHHHHHHHHHHTTCEEEEEEE
T ss_pred eeecccccchhHHHHHHHHHHHcCCcEEEEEE
Confidence 33 233445567778888888777766654
No 23
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.35 E-value=4.3e-12 Score=126.39 Aligned_cols=131 Identities=16% Similarity=0.166 Sum_probs=105.6
Q ss_pred hhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccC
Q 004759 71 PLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHF 149 (732)
Q Consensus 71 ~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~f 149 (732)
...+++.++++|||+|||+|..+..++.. .+.|+|+|+++.++..+++++++++.. ++.+...|+..+
T Consensus 48 l~~l~~~~~~~vLDlGcG~G~~~~~la~~-----------~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 48 LAALAPRRGELLWDIGGGSGSVSVEWCLA-----------GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp HHHHCCCTTCEEEEETCTTCHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred HHhcCCCCCCEEEEecCCCCHHHHHHHHc-----------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 34567899999999999999999999876 368999999999999999999999988 899999988762
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
.. ....||.|+++.. . .+. ++..+.++|||||
T Consensus 117 ~~---------------------~~~~~D~v~~~~~-----~---------------------~~~-~l~~~~~~LkpgG 148 (204)
T 3njr_A 117 LA---------------------DLPLPEAVFIGGG-----G---------------------SQA-LYDRLWEWLAPGT 148 (204)
T ss_dssp GT---------------------TSCCCSEEEECSC-----C---------------------CHH-HHHHHHHHSCTTC
T ss_pred cc---------------------cCCCCCEEEECCc-----c---------------------cHH-HHHHHHHhcCCCc
Confidence 11 0146999998541 0 023 7888999999999
Q ss_pred EEEEEcCCCCCcCcHHHHHHHHHHCCCcEEEEec
Q 004759 230 RIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 230 rLVYSTCSlnp~ENEaVV~~~L~~~~~~velvd~ 263 (732)
+||+++|+. ++...+.++|++.+..+.-+.+
T Consensus 149 ~lv~~~~~~---~~~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 149 RIVANAVTL---ESETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp EEEEEECSH---HHHHHHHHHHHHHCSEEEEEEE
T ss_pred EEEEEecCc---ccHHHHHHHHHhCCCcEEEEEe
Confidence 999999987 8888888999988744444443
No 24
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.34 E-value=3.2e-12 Score=127.66 Aligned_cols=114 Identities=13% Similarity=0.129 Sum_probs=92.0
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC-----CCceEEEecccccC
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC-----TANLIVTNHEAQHF 149 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg-----~~ni~Vt~~Da~~f 149 (732)
.++++++|||+|||+|.++.++++.++ +.+.|+++|+++.++..+++++.+.+ ..++.+...|+...
T Consensus 74 ~~~~~~~vLDiG~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 74 QLHEGAKALDVGSGSGILTACFARMVG--------CTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp TSCTTCEEEEETCTTSHHHHHHHHHHC--------TTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC
T ss_pred hCCCCCEEEEEcCCcCHHHHHHHHHhC--------CCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC
Confidence 478999999999999999999998864 25799999999999999999998866 46788888887642
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
+. ....||+|+++.+|.. ++..+.++|||||
T Consensus 146 ~~---------------------~~~~fD~i~~~~~~~~----------------------------~~~~~~~~LkpgG 176 (226)
T 1i1n_A 146 YA---------------------EEAPYDAIHVGAAAPV----------------------------VPQALIDQLKPGG 176 (226)
T ss_dssp CG---------------------GGCCEEEEEECSBBSS----------------------------CCHHHHHTEEEEE
T ss_pred cc---------------------cCCCcCEEEECCchHH----------------------------HHHHHHHhcCCCc
Confidence 11 1257999999988621 2346778999999
Q ss_pred EEEEEcCCCCCcCcHH
Q 004759 230 RIVYSTCSMNPVENEA 245 (732)
Q Consensus 230 rLVYSTCSlnp~ENEa 245 (732)
+||+++|+..+.++..
T Consensus 177 ~lv~~~~~~~~~~~~~ 192 (226)
T 1i1n_A 177 RLILPVGPAGGNQMLE 192 (226)
T ss_dssp EEEEEESCTTSCEEEE
T ss_pred EEEEEEecCCCceEEE
Confidence 9999999987766643
No 25
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.33 E-value=1.7e-11 Score=122.55 Aligned_cols=152 Identities=15% Similarity=0.128 Sum_probs=105.4
Q ss_pred CCCCCCEEEeecCC-CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 75 DVQPDHFVLDMCAA-PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 75 d~~pg~~VLDmCAA-PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
.++++.+|||+||| +|..+..++... .+.|+|+|+++..+..+++++++.+. ++.+...|+..+..+
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~- 119 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF----------NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGV- 119 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH----------CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTT-
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc----------CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhc-
Confidence 46789999999999 999999998874 26899999999999999999999988 888888887543221
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
....||.|++|+|+...+.-...... ..|.... ..+ ....+++..+.++|||||++++
T Consensus 120 -------------------~~~~fD~I~~npp~~~~~~~~~~~~~-~~~~~~~-~~~-~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 120 -------------------VEGTFDVIFSAPPYYDKPLGRVLTER-EAIGGGK-YGE-EFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp -------------------CCSCEEEEEECCCCC----------------CCS-SSC-HHHHHHHHHHGGGEEEEEEEEE
T ss_pred -------------------ccCceeEEEECCCCcCCccccccChh-hhhccCc-cch-HHHHHHHHHHHHHhCCCeEEEE
Confidence 12679999999998776542211111 1111111 111 3347899999999999999998
Q ss_pred EcCCCCCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 234 STCSMNPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 234 STCSlnp~ENEaVV~~~L~~~~~~velvd 262 (732)
.+++- + +...-+.+.+++.+..++.+.
T Consensus 178 ~~~~~-~-~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 178 YLPDK-E-KLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp EEESC-H-HHHHHHHHHHHHTTCEEEEEE
T ss_pred Eeccc-H-hHHHHHHHHHHHcCCceEEEE
Confidence 75442 1 445566777888776555554
No 26
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.33 E-value=9.6e-12 Score=128.91 Aligned_cols=143 Identities=13% Similarity=0.117 Sum_probs=106.9
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..++..+ +.+.|+|+|+++.++..+++|+++++..++.+...|+....
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~---------~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~------ 172 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASER---------PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL------ 172 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHC---------TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG------
T ss_pred cCCCEEEEecCCccHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhc------
Confidence 578899999999999999998764 35799999999999999999999999888888888765421
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccc----cchHHHHHHHHHHHHhhccCCCEEE
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLG----NGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~----~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
....||.|++++||.+.+...-.++++. +.|... ......+.+++..+.++|||||+++
T Consensus 173 ----------------~~~~fD~Iv~npPy~~~~~~~l~~~v~~-~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~ 235 (276)
T 2b3t_A 173 ----------------AGQQFAMIVSNPPYIDEQDPHLQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLL 235 (276)
T ss_dssp ----------------TTCCEEEEEECCCCBCTTCHHHHSSGGG-SSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEE
T ss_pred ----------------ccCCccEEEECCCCCCccccccChhhhh-cCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEE
Confidence 1257999999999998754211122221 222211 1122456889999999999999999
Q ss_pred EEcCCCCCcCcHHHHHHHHHHCC
Q 004759 233 YSTCSMNPVENEAVVAEILRKCE 255 (732)
Q Consensus 233 YSTCSlnp~ENEaVV~~~L~~~~ 255 (732)
+..+. .+..-+.+++++.|
T Consensus 236 ~~~~~----~~~~~~~~~l~~~G 254 (276)
T 2b3t_A 236 LEHGW----QQGEAVRQAFILAG 254 (276)
T ss_dssp EECCS----SCHHHHHHHHHHTT
T ss_pred EEECc----hHHHHHHHHHHHCC
Confidence 98554 34556777787765
No 27
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.33 E-value=1.2e-12 Score=144.03 Aligned_cols=126 Identities=18% Similarity=0.087 Sum_probs=97.3
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc--eEEEecccccCCCCcc
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN--LIVTNHEAQHFPGCRA 154 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n--i~Vt~~Da~~fp~~~~ 154 (732)
++|.+|||+|||+|++++.+|..+.+ .+.|+|+|+++.+++++++|++++++.+ +.++++|+..+...
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~g--------a~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~-- 120 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSC--------VEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRK-- 120 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSC--------EEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHS--
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCC--------CCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHH--
Confidence 67999999999999999999886421 3799999999999999999999999876 99999998764210
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
.....||+|++||+|+. ..++..|+++|++|| ++|+
T Consensus 121 -----------------~~~~~fD~V~lDP~g~~--------------------------~~~l~~a~~~Lk~gG-ll~~ 156 (392)
T 3axs_A 121 -----------------EWGFGFDYVDLDPFGTP--------------------------VPFIESVALSMKRGG-ILSL 156 (392)
T ss_dssp -----------------CCSSCEEEEEECCSSCC--------------------------HHHHHHHHHHEEEEE-EEEE
T ss_pred -----------------hhCCCCcEEEECCCcCH--------------------------HHHHHHHHHHhCCCC-EEEE
Confidence 00246999999997431 247889999999998 7889
Q ss_pred cCCCCCcCcHHHHHHHHHHCCC
Q 004759 235 TCSMNPVENEAVVAEILRKCEG 256 (732)
Q Consensus 235 TCSlnp~ENEaVV~~~L~~~~~ 256 (732)
||+-........+...+++++.
T Consensus 157 t~t~~~~l~g~~~~~~~rkYg~ 178 (392)
T 3axs_A 157 TATDTAPLSGTYPKTCMRRYMA 178 (392)
T ss_dssp EECCHHHHTTSSHHHHHHHHSS
T ss_pred EecchhhhccccHHHHHHHhCC
Confidence 9976443222234566677763
No 28
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.31 E-value=7.4e-12 Score=129.83 Aligned_cols=145 Identities=12% Similarity=0.191 Sum_probs=100.8
Q ss_pred CcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc-CC
Q 004759 58 GNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-CT 136 (732)
Q Consensus 58 G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl-g~ 136 (732)
+....++..+.+....++++++.+|||+|||+|..+..+++.+. +.+.|+++|+++.++..+++++++. |.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~g~ 161 (275)
T 1yb2_A 90 NTQIISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALN--------GKGTLTVVERDEDNLKKAMDNLSEFYDI 161 (275)
T ss_dssp ----------------CCCCTTCEEEEECCTTSHHHHHHHHHHT--------TSSEEEEECSCHHHHHHHHHHHHTTSCC
T ss_pred cccccChhhHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcC--------CCCEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 33444555455556677899999999999999999999998764 3579999999999999999999988 88
Q ss_pred CceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHH
Q 004759 137 ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQ 216 (732)
Q Consensus 137 ~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~ 216 (732)
.++.+...|+.... ....||+|++|+| ++ .+
T Consensus 162 ~~v~~~~~d~~~~~----------------------~~~~fD~Vi~~~~---------~~------------------~~ 192 (275)
T 1yb2_A 162 GNVRTSRSDIADFI----------------------SDQMYDAVIADIP---------DP------------------WN 192 (275)
T ss_dssp TTEEEECSCTTTCC----------------------CSCCEEEEEECCS---------CG------------------GG
T ss_pred CcEEEEECchhccC----------------------cCCCccEEEEcCc---------CH------------------HH
Confidence 88988888876510 1257999999876 11 14
Q ss_pred HHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCCCcEEEEecC
Q 004759 217 IAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVS 264 (732)
Q Consensus 217 IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~~~velvd~s 264 (732)
+|..+.++|||||+|++++|+.. ...-+...|++.+ +..+++.
T Consensus 193 ~l~~~~~~LkpgG~l~i~~~~~~---~~~~~~~~l~~~G--f~~~~~~ 235 (275)
T 1yb2_A 193 HVQKIASMMKPGSVATFYLPNFD---QSEKTVLSLSASG--MHHLETV 235 (275)
T ss_dssp SHHHHHHTEEEEEEEEEEESSHH---HHHHHHHHSGGGT--EEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEeCCHH---HHHHHHHHHHHCC--CeEEEEE
Confidence 68889999999999999998763 3333444555543 5555543
No 29
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.30 E-value=1.1e-11 Score=133.25 Aligned_cols=132 Identities=25% Similarity=0.331 Sum_probs=106.6
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCC
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPG 151 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~ 151 (732)
.+++++++..|||+|||+|..+..++.+.+ +.+.|+|+|+|+.++..+++|+++.|..++.+.+.|+..++.
T Consensus 197 ~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~--------~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~ 268 (354)
T 3tma_A 197 RLADARPGMRVLDPFTGSGTIALEAASTLG--------PTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR 268 (354)
T ss_dssp HHTTCCTTCCEEESSCTTSHHHHHHHHHHC--------TTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG
T ss_pred HHhCCCCCCEEEeCCCCcCHHHHHHHHhhC--------CCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc
Confidence 345788999999999999999999988752 247899999999999999999999998889999999887642
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
. ...||.|++||||.- .......+..++.+++..+.++|||||++
T Consensus 269 ~---------------------~~~~D~Ii~npPyg~--------------r~~~~~~~~~~~~~~~~~~~~~LkpgG~l 313 (354)
T 3tma_A 269 F---------------------FPEVDRILANPPHGL--------------RLGRKEGLFHLYWDFLRGALALLPPGGRV 313 (354)
T ss_dssp T---------------------CCCCSEEEECCCSCC------------------CHHHHHHHHHHHHHHHHTSCTTCEE
T ss_pred c---------------------cCCCCEEEECCCCcC--------------ccCCcccHHHHHHHHHHHHHHhcCCCcEE
Confidence 1 145899999999732 11222345678899999999999999999
Q ss_pred EEEcCCCCCcCcHHHHHHHHH
Q 004759 232 VYSTCSMNPVENEAVVAEILR 252 (732)
Q Consensus 232 VYSTCSlnp~ENEaVV~~~L~ 252 (732)
++.|| |+..+..+++
T Consensus 314 ~i~t~------~~~~~~~~~~ 328 (354)
T 3tma_A 314 ALLTL------RPALLKRALP 328 (354)
T ss_dssp EEEES------CHHHHHHHCC
T ss_pred EEEeC------CHHHHHHHhh
Confidence 99998 4566666665
No 30
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.30 E-value=2.3e-11 Score=117.46 Aligned_cols=135 Identities=14% Similarity=0.071 Sum_probs=93.8
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
.+++|++|||+|||+|..|..++.. .+.|+|+|+++.++..+++++++.+..++.+...++..++..
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~-----------~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~-- 85 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL-----------SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHY-- 85 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT-----------SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGT--
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh-----------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhh--
Confidence 4678999999999999999998775 379999999999999999999999988888888666553211
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
....||.|+++.+.-..+ ..........+.++|..+.++|||||+++.+
T Consensus 86 ------------------~~~~fD~v~~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 86 ------------------VREPIRAAIFNLGYLPSA-------------DKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp ------------------CCSCEEEEEEEEC------------------------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------------------ccCCcCEEEEeCCCCCCc-------------chhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 126799999875421111 0111123345677899999999999999988
Q ss_pred cCCCCCc---CcHHHHHHHHHHC
Q 004759 235 TCSMNPV---ENEAVVAEILRKC 254 (732)
Q Consensus 235 TCSlnp~---ENEaVV~~~L~~~ 254 (732)
.++-++. |.+. +..+++..
T Consensus 135 ~~~~~~~~~~~~~~-~~~~~~~l 156 (185)
T 3mti_A 135 IYYGHDGGDMEKDA-VLEYVIGL 156 (185)
T ss_dssp EC------CHHHHH-HHHHHHHS
T ss_pred EeCCCCCCHHHHHH-HHHHHHhC
Confidence 7765433 3333 44555544
No 31
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.28 E-value=2.9e-11 Score=117.94 Aligned_cols=137 Identities=17% Similarity=0.193 Sum_probs=101.9
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~ 152 (732)
+.++++.+|||+|||+|..+..++..++ +.+.|+|+|+++.++..++++++..+. .++.+...|+..++..
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 89 (197)
T 3eey_A 18 MFVKEGDTVVDATCGNGNDTAFLASLVG--------ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY 89 (197)
T ss_dssp HHCCTTCEEEESCCTTSHHHHHHHHHHC--------TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT
T ss_pred hcCCCCCEEEEcCCCCCHHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh
Confidence 4578899999999999999999998864 257999999999999999999999987 6899999998765421
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCC--CCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCS--GDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR 230 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCS--GdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGr 230 (732)
....||.|++|+|.- +++.+ ........+++..+.++|||||+
T Consensus 90 --------------------~~~~fD~v~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~~~~~Lk~gG~ 134 (197)
T 3eey_A 90 --------------------IDCPVKAVMFNLGYLPSGDHSI---------------STRPETTIQALSKAMELLVTGGI 134 (197)
T ss_dssp --------------------CCSCEEEEEEEESBCTTSCTTC---------------BCCHHHHHHHHHHHHHHEEEEEE
T ss_pred --------------------ccCCceEEEEcCCcccCccccc---------------ccCcccHHHHHHHHHHhCcCCCE
Confidence 126799999998741 11111 11122445689999999999999
Q ss_pred EEEEcCCCCCcC--cHHHHHHHHHH
Q 004759 231 IVYSTCSMNPVE--NEAVVAEILRK 253 (732)
Q Consensus 231 LVYSTCSlnp~E--NEaVV~~~L~~ 253 (732)
++.++++-.+.. ....+..+++.
T Consensus 135 l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (197)
T 3eey_A 135 ITVVIYYGGDTGFEEKEKVLEFLKG 159 (197)
T ss_dssp EEEEECCBTTTBSHHHHHHHHHHTT
T ss_pred EEEEEccCCCCcHHHHHHHHHHHHh
Confidence 998876543332 23344455543
No 32
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.27 E-value=1.4e-11 Score=126.46 Aligned_cols=110 Identities=16% Similarity=0.183 Sum_probs=87.5
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
|+++||++|||++||+|..|.+||+.++ |+|.|+|+|+++.++..|++++++. +|+..+..|+......
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG--------~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p~~~- 141 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIG--------PRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFPEKY- 141 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHC--------TTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCGGGG-
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhC--------CCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCcccc-
Confidence 5799999999999999999999999986 4799999999999999998877654 5788887777652211
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
......||.|++|.+... ....++.++.++|||||+++.
T Consensus 142 -----------------~~~~~~vDvVf~d~~~~~------------------------~~~~~l~~~~r~LKpGG~lvI 180 (233)
T 4df3_A 142 -----------------RHLVEGVDGLYADVAQPE------------------------QAAIVVRNARFFLRDGGYMLM 180 (233)
T ss_dssp -----------------TTTCCCEEEEEECCCCTT------------------------HHHHHHHHHHHHEEEEEEEEE
T ss_pred -----------------ccccceEEEEEEeccCCh------------------------hHHHHHHHHHHhccCCCEEEE
Confidence 122367999999987332 123578899999999999998
Q ss_pred Ec
Q 004759 234 ST 235 (732)
Q Consensus 234 ST 235 (732)
+.
T Consensus 181 ~i 182 (233)
T 4df3_A 181 AI 182 (233)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 33
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.27 E-value=1.5e-11 Score=117.26 Aligned_cols=132 Identities=16% Similarity=0.248 Sum_probs=103.1
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeccccc-CC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQH-FP 150 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~-fp 150 (732)
.+++.++++|||+|||+|..+.+++... +.+.|+++|+++.++..+++++++.+.. ++ +...|+.. ++
T Consensus 20 ~~~~~~~~~vldiG~G~G~~~~~l~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~ 89 (178)
T 3hm2_A 20 ALAPKPHETLWDIGGGSGSIAIEWLRST---------PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFD 89 (178)
T ss_dssp HHCCCTTEEEEEESTTTTHHHHHHHTTS---------SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGG
T ss_pred HhcccCCCeEEEeCCCCCHHHHHHHHHC---------CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhh
Confidence 4578899999999999999999987763 3589999999999999999999999887 77 77776543 11
Q ss_pred CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCE
Q 004759 151 GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR 230 (732)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGr 230 (732)
.....||.|+++.+... ..++..+.++|||||+
T Consensus 90 ---------------------~~~~~~D~i~~~~~~~~--------------------------~~~l~~~~~~L~~gG~ 122 (178)
T 3hm2_A 90 ---------------------DVPDNPDVIFIGGGLTA--------------------------PGVFAAAWKRLPVGGR 122 (178)
T ss_dssp ---------------------GCCSCCSEEEECC-TTC--------------------------TTHHHHHHHTCCTTCE
T ss_pred ---------------------ccCCCCCEEEECCcccH--------------------------HHHHHHHHHhcCCCCE
Confidence 11157999998543110 3578889999999999
Q ss_pred EEEEcCCCCCcCcHHHHHHHHHHCCCcEEEEecC
Q 004759 231 IVYSTCSMNPVENEAVVAEILRKCEGSVELVDVS 264 (732)
Q Consensus 231 LVYSTCSlnp~ENEaVV~~~L~~~~~~velvd~s 264 (732)
+++++++. ++...+..++++.+..+.-+.++
T Consensus 123 l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 153 (178)
T 3hm2_A 123 LVANAVTV---ESEQMLWALRKQFGGTISSFAIS 153 (178)
T ss_dssp EEEEECSH---HHHHHHHHHHHHHCCEEEEEEEE
T ss_pred EEEEeecc---ccHHHHHHHHHHcCCeeEEEEee
Confidence 99998887 77788888898887665555544
No 34
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.23 E-value=6.6e-11 Score=128.63 Aligned_cols=143 Identities=12% Similarity=0.125 Sum_probs=106.1
Q ss_pred CcEEEccccccchhhh-cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC
Q 004759 58 GNITRQEAVSMVPPLF-LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT 136 (732)
Q Consensus 58 G~i~~Qd~~Smlp~ll-Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~ 136 (732)
|..+.|+.++.+.... ....++.+|||+| |+|..+..++.. + +.+.|+++|+++.++..++++++++|.
T Consensus 151 ~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~-~--------~~~~v~~vDi~~~~l~~a~~~~~~~g~ 220 (373)
T 2qm3_A 151 AYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLS-G--------LPKRIAVLDIDERLTKFIEKAANEIGY 220 (373)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHH-T--------CCSEEEEECSCHHHHHHHHHHHHHHTC
T ss_pred eecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHh-C--------CCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 4445555555444332 2345789999999 999999888664 1 347999999999999999999999998
Q ss_pred CceEEEeccccc-CCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHH
Q 004759 137 ANLIVTNHEAQH-FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQV 215 (732)
Q Consensus 137 ~ni~Vt~~Da~~-fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~ 215 (732)
.++.+..+|+.. +|.. ....||.|++|+||+..| ..
T Consensus 221 ~~v~~~~~D~~~~l~~~--------------------~~~~fD~Vi~~~p~~~~~-----------------------~~ 257 (373)
T 2qm3_A 221 EDIEIFTFDLRKPLPDY--------------------ALHKFDTFITDPPETLEA-----------------------IR 257 (373)
T ss_dssp CCEEEECCCTTSCCCTT--------------------TSSCBSEEEECCCSSHHH-----------------------HH
T ss_pred CCEEEEEChhhhhchhh--------------------ccCCccEEEECCCCchHH-----------------------HH
Confidence 789999999876 3310 014799999999976311 16
Q ss_pred HHHHHHHhhccCCCE-EEEEcCCCCCcCcH---HHHHHHHH-HCC
Q 004759 216 QIAMRGISLLKVGGR-IVYSTCSMNPVENE---AVVAEILR-KCE 255 (732)
Q Consensus 216 ~IL~rAl~lLKpGGr-LVYSTCSlnp~ENE---aVV~~~L~-~~~ 255 (732)
.+|.++.++|||||+ ++|++|+ ..++. ..+..++. +.+
T Consensus 258 ~~l~~~~~~LkpgG~~~~~~~~~--~~~~~~~~~~~~~~l~~~~g 300 (373)
T 2qm3_A 258 AFVGRGIATLKGPRCAGYFGITR--RESSLDKWREIQKLLLNEFN 300 (373)
T ss_dssp HHHHHHHHTBCSTTCEEEEEECT--TTCCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHcccCCeEEEEEEec--CcCCHHHHHHHHHHHHHhcC
Confidence 789999999999995 5899887 23444 56677776 665
No 35
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.23 E-value=1.8e-11 Score=123.09 Aligned_cols=142 Identities=13% Similarity=0.102 Sum_probs=109.2
Q ss_pred hhHHHHHHHhhcccccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCH
Q 004759 42 QTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDV 121 (732)
Q Consensus 42 ~~l~~~~~~l~~~~~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~ 121 (732)
+.+..+..|.. +.|....|.....+...++.+.++.+|||+|||+|..+..++..+ |.+.|+++|+++
T Consensus 21 ~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~---------~~~~v~~vD~~~ 88 (233)
T 2gpy_A 21 QYIEQMEREAH---EQQVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQAL---------PEATIVSIERDE 88 (233)
T ss_dssp HHHHHHHHHHH---HTTCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHC---------TTCEEEEECCCH
T ss_pred HHHHHHHHHHH---HcCCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHC---------CCCEEEEEECCH
Confidence 34445544422 346666777777777777888899999999999999999999874 357999999999
Q ss_pred HHHHHHHHHHHHcCCC-ceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhh
Q 004759 122 QRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWR 200 (732)
Q Consensus 122 ~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~ 200 (732)
.++..+++++++.+.. ++.+...|+..+... ......||.|++|++|+
T Consensus 89 ~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------------------~~~~~~fD~I~~~~~~~------------- 137 (233)
T 2gpy_A 89 RRYEEAHKHVKALGLESRIELLFGDALQLGEK------------------LELYPLFDVLFIDAAKG------------- 137 (233)
T ss_dssp HHHHHHHHHHHHTTCTTTEEEECSCGGGSHHH------------------HTTSCCEEEEEEEGGGS-------------
T ss_pred HHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh------------------cccCCCccEEEECCCHH-------------
Confidence 9999999999999875 588888887653110 00025799999998753
Q ss_pred hcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCC
Q 004759 201 KWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 238 (732)
Q Consensus 201 ~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSl 238 (732)
.+..++..+.++|+|||+|+++++.+
T Consensus 138 ------------~~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 138 ------------QYRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp ------------CHHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred ------------HHHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 12467889999999999999997655
No 36
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.22 E-value=1.2e-11 Score=122.50 Aligned_cols=130 Identities=16% Similarity=0.138 Sum_probs=90.4
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
+++|.+|||+|||||++|..+++. .+.|+|+|+++.. ..+++.+..+|+...+....
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-----------~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~- 79 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-----------ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDD- 79 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-----------CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHH-
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-----------CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHH-
Confidence 468999999999999999998775 4799999998752 24678888888766331100
Q ss_pred CCCCCCCccccccccccc---cccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 156 KNFSSASDKGIESESNMG---QLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~---~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
. ..... ...||+|++|+++...|... .+ ......++..+|..|.++|||||++|
T Consensus 80 -----------~-~~~~~~~~~~~~D~Vlsd~~~~~~g~~~--~d---------~~~~~~l~~~~l~~a~~~LkpGG~lv 136 (191)
T 3dou_A 80 -----------I-DRALREEGIEKVDDVVSDAMAKVSGIPS--RD---------HAVSYQIGQRVMEIAVRYLRNGGNVL 136 (191)
T ss_dssp -----------H-HHHHHHHTCSSEEEEEECCCCCCCSCHH--HH---------HHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred -----------H-HHHhhcccCCcceEEecCCCcCCCCCcc--cC---------HHHHHHHHHHHHHHHHHHccCCCEEE
Confidence 0 00000 03799999999888777421 11 12234577889999999999999999
Q ss_pred EEcCCCCCcCcHHHHHHHHHHC
Q 004759 233 YSTCSMNPVENEAVVAEILRKC 254 (732)
Q Consensus 233 YSTCSlnp~ENEaVV~~~L~~~ 254 (732)
..+ ...++...+...|+..
T Consensus 137 ~k~---~~~~~~~~~~~~l~~~ 155 (191)
T 3dou_A 137 LKQ---FQGDMTNDFIAIWRKN 155 (191)
T ss_dssp EEE---ECSTHHHHHHHHHGGG
T ss_pred EEE---cCCCCHHHHHHHHHHh
Confidence 544 4446666666677653
No 37
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.19 E-value=7.1e-11 Score=126.67 Aligned_cols=167 Identities=11% Similarity=0.128 Sum_probs=115.9
Q ss_pred cCcEEEccccccchhhhc----CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHH
Q 004759 57 IGNITRQEAVSMVPPLFL----DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTK 132 (732)
Q Consensus 57 ~G~i~~Qd~~Smlp~llL----d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~k 132 (732)
.|.++-.+....+...++ ++.++.+|||.|||+|+.+..+++.+.... .....|+|+|+++..+..++.++.
T Consensus 105 ~g~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~----~~~~~v~GiDi~~~~~~~a~~n~~ 180 (344)
T 2f8l_A 105 VNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKG----DVDVHASGVDVDDLLISLALVGAD 180 (344)
T ss_dssp GGGCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTS----SCEEEEEEEESCHHHHHHHHHHHH
T ss_pred cCcCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhc----CCCceEEEEECCHHHHHHHHHHHH
Confidence 465554444333322232 566789999999999999999998875310 012789999999999999999998
Q ss_pred HcCCCceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHH
Q 004759 133 RMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHS 212 (732)
Q Consensus 133 Rlg~~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~ 212 (732)
..|. ++.+.++|+.... ....||.|+++||++ .+. ..+.+.+|.+....+...
T Consensus 181 ~~g~-~~~i~~~D~l~~~----------------------~~~~fD~Ii~NPPfg---~~~-~~~~~~~~~~~~~~g~~~ 233 (344)
T 2f8l_A 181 LQRQ-KMTLLHQDGLANL----------------------LVDPVDVVISDLPVG---YYP-DDENAKTFELCREEGHSF 233 (344)
T ss_dssp HHTC-CCEEEESCTTSCC----------------------CCCCEEEEEEECCCS---EES-CHHHHTTSTTCCSSSCEE
T ss_pred hCCC-CceEEECCCCCcc----------------------ccCCccEEEECCCCC---CcC-chhhhhhccccCCCCcch
Confidence 8887 5777777764411 125799999999973 332 344555665543344455
Q ss_pred HHHHHHHHHHhhccCCCEEEEEcC-CCCCcCcHHHHHHHHHHC
Q 004759 213 LQVQIAMRGISLLKVGGRIVYSTC-SMNPVENEAVVAEILRKC 254 (732)
Q Consensus 213 lQ~~IL~rAl~lLKpGGrLVYSTC-Slnp~ENEaVV~~~L~~~ 254 (732)
.+..++.+++++||+||++++.++ ++.......-+...|.+.
T Consensus 234 ~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~ 276 (344)
T 2f8l_A 234 AHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKN 276 (344)
T ss_dssp HHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhC
Confidence 777899999999999999998863 333334455566666554
No 38
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.19 E-value=6.8e-11 Score=120.10 Aligned_cols=127 Identities=19% Similarity=0.262 Sum_probs=99.7
Q ss_pred chhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEecccc
Q 004759 69 VPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQ 147 (732)
Q Consensus 69 lp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~Vt~~Da~ 147 (732)
.....+++.++.+|||+|||+|..+..++..++ |.+.|+++|+++.++..++++++..+..+ +.+...|+.
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~--------~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 155 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVG--------PEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY 155 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHC--------TTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhC--------CCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh
Confidence 334467889999999999999999999999875 35899999999999999999999999876 889888876
Q ss_pred cCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccC
Q 004759 148 HFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKV 227 (732)
Q Consensus 148 ~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKp 227 (732)
... ....||.|++|+|+. ..++.++.++|+|
T Consensus 156 ~~~----------------------~~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L~~ 186 (255)
T 3mb5_A 156 EGI----------------------EEENVDHVILDLPQP---------------------------ERVVEHAAKALKP 186 (255)
T ss_dssp GCC----------------------CCCSEEEEEECSSCG---------------------------GGGHHHHHHHEEE
T ss_pred hcc----------------------CCCCcCEEEECCCCH---------------------------HHHHHHHHHHcCC
Confidence 421 125699999988722 1357888999999
Q ss_pred CCEEEEEcCCCCCcCcHHHHHHHHHHCC
Q 004759 228 GGRIVYSTCSMNPVENEAVVAEILRKCE 255 (732)
Q Consensus 228 GGrLVYSTCSlnp~ENEaVV~~~L~~~~ 255 (732)
||+++.++-+. +...-+...|++++
T Consensus 187 gG~l~~~~~~~---~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 187 GGFFVAYTPCS---NQVMRLHEKLREFK 211 (255)
T ss_dssp EEEEEEEESSH---HHHHHHHHHHHHTG
T ss_pred CCEEEEEECCH---HHHHHHHHHHHHcC
Confidence 99998654332 34445566777765
No 39
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.19 E-value=8.6e-11 Score=117.83 Aligned_cols=135 Identities=20% Similarity=0.247 Sum_probs=92.9
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
+.+++|++|||+|||+|..|.+++..++ .|.|+|+|+++.++..+.+.+++. .++.+...|+......
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~---------~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~- 120 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD---------EGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKY- 120 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT---------TSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGT-
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC---------CCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhh-
Confidence 4678999999999999999999998753 479999999999988777777654 4677777776552100
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHH-HHHHHHHhhccCCCEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQV-QIAMRGISLLKVGGRIV 232 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~-~IL~rAl~lLKpGGrLV 232 (732)
... ...||.|++|++ .+ .|. .++..+.++|||||+++
T Consensus 121 ----------------~~~-~~~fD~V~~~~~---------~~----------------~~~~~~l~~~~r~LkpgG~l~ 158 (210)
T 1nt2_A 121 ----------------SGI-VEKVDLIYQDIA---------QK----------------NQIEILKANAEFFLKEKGEVV 158 (210)
T ss_dssp ----------------TTT-CCCEEEEEECCC---------ST----------------THHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------ccc-ccceeEEEEecc---------Ch----------------hHHHHHHHHHHHHhCCCCEEE
Confidence 001 157999999742 01 122 34888999999999999
Q ss_pred EEc---CCCCCcCcHHHHHHH---HHHCCCcEEEEecCc
Q 004759 233 YST---CSMNPVENEAVVAEI---LRKCEGSVELVDVSN 265 (732)
Q Consensus 233 YST---CSlnp~ENEaVV~~~---L~~~~~~velvd~s~ 265 (732)
++. |.-.....+.+.... |++. +++++...
T Consensus 159 i~~~~~~~~~~~~~~~~~~~~~~~l~~~---f~~~~~~~ 194 (210)
T 1nt2_A 159 IMVKARSIDSTAEPEEVFKSVLKEMEGD---FKIVKHGS 194 (210)
T ss_dssp EEEEHHHHCTTSCHHHHHHHHHHHHHTT---SEEEEEEE
T ss_pred EEEecCCccccCCHHHHHHHHHHHHHhh---cEEeeeec
Confidence 983 222233445554222 5543 66666543
No 40
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.19 E-value=3.3e-10 Score=114.67 Aligned_cols=112 Identities=15% Similarity=0.127 Sum_probs=91.5
Q ss_pred hhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc-CCCceEEEecccccC
Q 004759 71 PLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-CTANLIVTNHEAQHF 149 (732)
Q Consensus 71 ~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl-g~~ni~Vt~~Da~~f 149 (732)
...+++.++.+|||+|||+|..+..++..++ +.+.|+++|+++.++..+++++++. |..++.+...|+..+
T Consensus 89 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--------~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~ 160 (258)
T 2pwy_A 89 VTLLDLAPGMRVLEAGTGSGGLTLFLARAVG--------EKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA 160 (258)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC
T ss_pred HHHcCCCCCCEEEEECCCcCHHHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc
Confidence 3456889999999999999999999998874 3579999999999999999999888 877888988887664
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
+. ....||.|++|+|.. ..+|.++.++|+|||
T Consensus 161 ~~---------------------~~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L~~gG 192 (258)
T 2pwy_A 161 EL---------------------EEAAYDGVALDLMEP---------------------------WKVLEKAALALKPDR 192 (258)
T ss_dssp CC---------------------CTTCEEEEEEESSCG---------------------------GGGHHHHHHHEEEEE
T ss_pred CC---------------------CCCCcCEEEECCcCH---------------------------HHHHHHHHHhCCCCC
Confidence 21 125799999987611 146788899999999
Q ss_pred EEEEEcCCC
Q 004759 230 RIVYSTCSM 238 (732)
Q Consensus 230 rLVYSTCSl 238 (732)
+++.++.+.
T Consensus 193 ~l~~~~~~~ 201 (258)
T 2pwy_A 193 FLVAYLPNI 201 (258)
T ss_dssp EEEEEESCH
T ss_pred EEEEEeCCH
Confidence 999877654
No 41
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.19 E-value=4.2e-11 Score=119.78 Aligned_cols=151 Identities=12% Similarity=0.139 Sum_probs=107.1
Q ss_pred EEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ce
Q 004759 61 TRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NL 139 (732)
Q Consensus 61 ~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni 139 (732)
..+.....+...++...++.+|||+|||+|..|..+++.+. +.+.|+++|+++.++..+++++++.+.. ++
T Consensus 41 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v 112 (221)
T 3u81_A 41 NVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQ--------PGARLLTMEINPDCAAITQQMLNFAGLQDKV 112 (221)
T ss_dssp GCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSC--------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGE
T ss_pred ccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCC--------CCCEEEEEeCChHHHHHHHHHHHHcCCCCce
Confidence 34555555556666777889999999999999999988653 2589999999999999999999999976 59
Q ss_pred EEEecccccC-CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHH
Q 004759 140 IVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIA 218 (732)
Q Consensus 140 ~Vt~~Da~~f-p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL 218 (732)
.+..+|+..+ +.+. .......||.|++|.++.. .....+++
T Consensus 113 ~~~~~d~~~~l~~~~----------------~~~~~~~fD~V~~d~~~~~----------------------~~~~~~~~ 154 (221)
T 3u81_A 113 TILNGASQDLIPQLK----------------KKYDVDTLDMVFLDHWKDR----------------------YLPDTLLL 154 (221)
T ss_dssp EEEESCHHHHGGGTT----------------TTSCCCCCSEEEECSCGGG----------------------HHHHHHHH
T ss_pred EEEECCHHHHHHHHH----------------HhcCCCceEEEEEcCCccc----------------------chHHHHHH
Confidence 9999998653 2110 0011257999999864211 11223456
Q ss_pred HHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 219 MRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 219 ~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~~~velvd 262 (732)
..+ ++|||||+||+..|... +...+.+.++..+ .++...
T Consensus 155 ~~~-~~LkpgG~lv~~~~~~~---~~~~~~~~l~~~~-~~~~~~ 193 (221)
T 3u81_A 155 EKC-GLLRKGTVLLADNVIVP---GTPDFLAYVRGSS-SFECTH 193 (221)
T ss_dssp HHT-TCCCTTCEEEESCCCCC---CCHHHHHHHHHCT-TEEEEE
T ss_pred Hhc-cccCCCeEEEEeCCCCc---chHHHHHHHhhCC-CceEEE
Confidence 666 99999999999998863 3344456666654 354443
No 42
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.17 E-value=1.7e-10 Score=119.38 Aligned_cols=131 Identities=16% Similarity=0.161 Sum_probs=101.0
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCC
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFP 150 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp 150 (732)
..+++.++.+|||+|||+|..+..++..++ +.+.|+++|+++.++..+++++++.+. .++.+...|+..+
T Consensus 106 ~~~~~~~~~~VLDiG~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 176 (277)
T 1o54_A 106 MMLDVKEGDRIIDTGVGSGAMCAVLARAVG--------SSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG- 176 (277)
T ss_dssp HHTTCCTTCEEEEECCTTSHHHHHHHHHTT--------TTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-
T ss_pred HHhCCCCCCEEEEECCcCCHHHHHHHHHhC--------CCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-
Confidence 456889999999999999999999998764 358999999999999999999999887 6788888877653
Q ss_pred CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCE
Q 004759 151 GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR 230 (732)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGr 230 (732)
+ ....||.|++|+|+. ..+|..+.++|+|||+
T Consensus 177 -~--------------------~~~~~D~V~~~~~~~---------------------------~~~l~~~~~~L~pgG~ 208 (277)
T 1o54_A 177 -F--------------------DEKDVDALFLDVPDP---------------------------WNYIDKCWEALKGGGR 208 (277)
T ss_dssp -C--------------------SCCSEEEEEECCSCG---------------------------GGTHHHHHHHEEEEEE
T ss_pred -c--------------------cCCccCEEEECCcCH---------------------------HHHHHHHHHHcCCCCE
Confidence 1 115699999998732 1457888899999999
Q ss_pred EEEEcCCCCCcCcHHHHHHHHHHCCCcEEEEecC
Q 004759 231 IVYSTCSMNPVENEAVVAEILRKCEGSVELVDVS 264 (732)
Q Consensus 231 LVYSTCSlnp~ENEaVV~~~L~~~~~~velvd~s 264 (732)
|++.+++. +.-.-+...|++.+ +..+.+.
T Consensus 209 l~~~~~~~---~~~~~~~~~l~~~g--f~~~~~~ 237 (277)
T 1o54_A 209 FATVCPTT---NQVQETLKKLQELP--FIRIEVW 237 (277)
T ss_dssp EEEEESSH---HHHHHHHHHHHHSS--EEEEEEE
T ss_pred EEEEeCCH---HHHHHHHHHHHHCC--CceeEEE
Confidence 99988765 22334445566643 5555543
No 43
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.16 E-value=8.1e-11 Score=122.55 Aligned_cols=108 Identities=20% Similarity=0.165 Sum_probs=88.5
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
..+.++++|||+|||+|..+..++.... .+.|+|+|+++..+..+++|++.++..++.+.++|+..++.
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~~---------~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-- 183 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYSK---------PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-- 183 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHTC---------CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC--
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhCC---------CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc--
Confidence 3478899999999999999999988732 46999999999999999999999999899999999877521
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
...||+|++|+|. +. .+++..++++|+|||+|++
T Consensus 184 --------------------~~~~D~Vi~d~p~---~~-----------------------~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 184 --------------------KDVADRVIMGYVH---KT-----------------------HKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp --------------------TTCEEEEEECCCS---SG-----------------------GGGHHHHHHHEEEEEEEEE
T ss_pred --------------------cCCceEEEECCcc---cH-----------------------HHHHHHHHHHcCCCCEEEE
Confidence 2579999999984 10 1357788899999998775
Q ss_pred EcCCCC
Q 004759 234 STCSMN 239 (732)
Q Consensus 234 STCSln 239 (732)
| |...
T Consensus 218 s-~~~~ 222 (272)
T 3a27_A 218 H-ETVA 222 (272)
T ss_dssp E-EEEE
T ss_pred E-EcCc
Confidence 5 5543
No 44
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.15 E-value=2.8e-11 Score=118.13 Aligned_cols=146 Identities=14% Similarity=0.131 Sum_probs=78.7
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..++... +.+.|+++|+++.++..+++++...+. ++.+...|+.....
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~----- 93 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC---------PGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLI----- 93 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC---------TTEEEEEEECC--------------------CCHHHHHHHHH-----
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC---------CCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhh-----
Confidence 688999999999999999998873 357999999999999999999888776 67777777654100
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccc----cchHHHHHHHHHHHHhhccCCCEEE
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLG----NGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~----~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
........||.|++|+|+...+.+...+.....+.+... ..-.....+++..+.++|||||+++
T Consensus 94 ------------~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 161 (215)
T 4dzr_A 94 ------------ERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGV 161 (215)
T ss_dssp ------------HHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEE
T ss_pred ------------hhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEE
Confidence 000112679999999999877765443322222221111 1112344788999999999999955
Q ss_pred EEcCCCCCcCcHHHHHHHHH
Q 004759 233 YSTCSMNPVENEAVVAEILR 252 (732)
Q Consensus 233 YSTCSlnp~ENEaVV~~~L~ 252 (732)
+..+.. ....-+..+++
T Consensus 162 ~~~~~~---~~~~~~~~~l~ 178 (215)
T 4dzr_A 162 FLEVGH---NQADEVARLFA 178 (215)
T ss_dssp EEECTT---SCHHHHHHHTG
T ss_pred EEEECC---ccHHHHHHHHH
Confidence 555553 45556677776
No 45
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.15 E-value=8.5e-11 Score=123.42 Aligned_cols=136 Identities=12% Similarity=0.113 Sum_probs=98.5
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEecccccCCCCccC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~Vt~~Da~~fp~~~~~ 155 (732)
.++.+|||+|||+|..+..++.. . ...|+|+|+|+..+..+++|+++++..+ +.+..+|+....
T Consensus 122 ~~~~~vLDlG~GsG~~~~~la~~-~---------~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~----- 186 (284)
T 1nv8_A 122 YGIKTVADIGTGSGAIGVSVAKF-S---------DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF----- 186 (284)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHH-S---------SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG-----
T ss_pred cCCCEEEEEeCchhHHHHHHHHC-C---------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc-----
Confidence 47789999999999999999886 3 4799999999999999999999999875 888888875511
Q ss_pred CCCCCCCccccccccccccccc---cEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHH-hhccCCCEE
Q 004759 156 KNFSSASDKGIESESNMGQLLF---DRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGI-SLLKVGGRI 231 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~F---DrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl-~lLKpGGrL 231 (732)
...| |.|++||||.+.+. ...+++. |.+..+..-......++++.+ +.|+|||+|
T Consensus 187 ------------------~~~f~~~D~IvsnPPyi~~~~-~l~~~v~--~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l 245 (284)
T 1nv8_A 187 ------------------KEKFASIEMILSNPPYVKSSA-HLPKDVL--FEPPEALFGGEDGLDFYREFFGRYDTSGKIV 245 (284)
T ss_dssp ------------------GGGTTTCCEEEECCCCBCGGG-SCTTSCC--CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEE
T ss_pred ------------------ccccCCCCEEEEcCCCCCccc-ccChhhc--cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEE
Confidence 0357 99999999999876 3333332 332221110111126788888 999999999
Q ss_pred EEEcCCCCCcCcHHHHHHHHH
Q 004759 232 VYSTCSMNPVENEAVVAEILR 252 (732)
Q Consensus 232 VYSTCSlnp~ENEaVV~~~L~ 252 (732)
++. +...+.++|. ++++
T Consensus 246 ~~e---~~~~q~~~v~-~~~~ 262 (284)
T 1nv8_A 246 LME---IGEDQVEELK-KIVS 262 (284)
T ss_dssp EEE---CCTTCHHHHT-TTST
T ss_pred EEE---ECchHHHHHH-HHHH
Confidence 963 4455665554 3443
No 46
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.15 E-value=4.3e-11 Score=122.52 Aligned_cols=125 Identities=10% Similarity=0.106 Sum_probs=97.0
Q ss_pred ccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEE
Q 004759 63 QEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIV 141 (732)
Q Consensus 63 Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~V 141 (732)
+.....+...++...++.+|||+|||+|..|..++..+. +.+.|+++|+++.++..++.++++.+.. ++.+
T Consensus 48 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~ 119 (248)
T 3tfw_A 48 AANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELP--------ADGQLLTLEADAHHAQVARENLQLAGVDQRVTL 119 (248)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSC--------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEE
T ss_pred CHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE
Confidence 344444555555677899999999999999999988753 2589999999999999999999999986 7999
Q ss_pred EecccccC-CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHH
Q 004759 142 TNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMR 220 (732)
Q Consensus 142 t~~Da~~f-p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~r 220 (732)
..+|+..+ +.+ .....||.|++|+++.. ....+..
T Consensus 120 ~~~d~~~~l~~~-------------------~~~~~fD~V~~d~~~~~-------------------------~~~~l~~ 155 (248)
T 3tfw_A 120 REGPALQSLESL-------------------GECPAFDLIFIDADKPN-------------------------NPHYLRW 155 (248)
T ss_dssp EESCHHHHHHTC-------------------CSCCCCSEEEECSCGGG-------------------------HHHHHHH
T ss_pred EEcCHHHHHHhc-------------------CCCCCeEEEEECCchHH-------------------------HHHHHHH
Confidence 99988663 211 11247999999875211 1246888
Q ss_pred HHhhccCCCEEEEEcCCCC
Q 004759 221 GISLLKVGGRIVYSTCSMN 239 (732)
Q Consensus 221 Al~lLKpGGrLVYSTCSln 239 (732)
+.++|||||+||+..+...
T Consensus 156 ~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 156 ALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp HHHTCCTTCEEEEECCSGG
T ss_pred HHHhcCCCeEEEEeCCCcC
Confidence 8999999999999887654
No 47
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.14 E-value=2.5e-10 Score=111.08 Aligned_cols=112 Identities=15% Similarity=0.100 Sum_probs=88.5
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..++.. +.+.|+|+|+|+..+..+++++++.+..++.+.+.|+..++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----- 107 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR----------GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVA----- 107 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT----------TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHH-----
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC----------CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHh-----
Confidence 47889999999999999887663 246899999999999999999999998889999999876431
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHh--hccCCCEEEEE
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGIS--LLKVGGRIVYS 234 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~--lLKpGGrLVYS 234 (732)
......||.|++|+|.... .....+++....+ +|+|||+++..
T Consensus 108 --------------~~~~~~fD~i~~~~p~~~~---------------------~~~~~~~l~~~~~~~~L~pgG~l~~~ 152 (189)
T 3p9n_A 108 --------------AGTTSPVDLVLADPPYNVD---------------------SADVDAILAALGTNGWTREGTVAVVE 152 (189)
T ss_dssp --------------HCCSSCCSEEEECCCTTSC---------------------HHHHHHHHHHHHHSSSCCTTCEEEEE
T ss_pred --------------hccCCCccEEEECCCCCcc---------------------hhhHHHHHHHHHhcCccCCCeEEEEE
Confidence 0113679999999983321 1233457777777 99999999998
Q ss_pred cCCC
Q 004759 235 TCSM 238 (732)
Q Consensus 235 TCSl 238 (732)
+.+-
T Consensus 153 ~~~~ 156 (189)
T 3p9n_A 153 RATT 156 (189)
T ss_dssp EETT
T ss_pred ecCC
Confidence 7664
No 48
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.12 E-value=2.1e-10 Score=123.15 Aligned_cols=102 Identities=20% Similarity=0.276 Sum_probs=87.6
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~~~ 154 (732)
+.+|.+|||+|||+|+.+.. +. + .+.|+|+|+++..+..+++|++.++. .++.+.++|+..++
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~--~---------~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---- 256 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK--N---------AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---- 256 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT--T---------SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----
T ss_pred cCCCCEEEEccCccCHHHHh-cc--C---------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----
Confidence 35899999999999999988 65 2 47899999999999999999999997 57999999887642
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
..||+|++|+|..+. .++..++++|++||+|+|+
T Consensus 257 --------------------~~fD~Vi~dpP~~~~--------------------------~~l~~~~~~L~~gG~l~~~ 290 (336)
T 2yx1_A 257 --------------------VKGNRVIMNLPKFAH--------------------------KFIDKALDIVEEGGVIHYY 290 (336)
T ss_dssp --------------------CCEEEEEECCTTTGG--------------------------GGHHHHHHHEEEEEEEEEE
T ss_pred --------------------CCCcEEEECCcHhHH--------------------------HHHHHHHHHcCCCCEEEEE
Confidence 469999999995431 4678889999999999999
Q ss_pred cCCCC
Q 004759 235 TCSMN 239 (732)
Q Consensus 235 TCSln 239 (732)
+|+-.
T Consensus 291 ~~~~~ 295 (336)
T 2yx1_A 291 TIGKD 295 (336)
T ss_dssp EEESS
T ss_pred EeecC
Confidence 99987
No 49
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.12 E-value=1.3e-10 Score=115.62 Aligned_cols=127 Identities=14% Similarity=0.100 Sum_probs=95.9
Q ss_pred ccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEE
Q 004759 63 QEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIV 141 (732)
Q Consensus 63 Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~V 141 (732)
+.....+...++...++.+|||+|||+|..|..+++.+. +.+.|+++|+++.++..+++++++.+..+ +.+
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~ 114 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLS--------SGGRVVTLEASEKHADIARSNIERANLNDRVEV 114 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCC--------SSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEE
T ss_pred CHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE
Confidence 444455555566677899999999999999999988753 15899999999999999999999999865 889
Q ss_pred EecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHH
Q 004759 142 TNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRG 221 (732)
Q Consensus 142 t~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rA 221 (732)
..+|+..+... + .......||.|++|++++ ....++..+
T Consensus 115 ~~~d~~~~~~~-~---------------~~~~~~~fD~v~~d~~~~-------------------------~~~~~l~~~ 153 (223)
T 3duw_A 115 RTGLALDSLQQ-I---------------ENEKYEPFDFIFIDADKQ-------------------------NNPAYFEWA 153 (223)
T ss_dssp EESCHHHHHHH-H---------------HHTTCCCCSEEEECSCGG-------------------------GHHHHHHHH
T ss_pred EEcCHHHHHHH-H---------------HhcCCCCcCEEEEcCCcH-------------------------HHHHHHHHH
Confidence 99888653110 0 000014699999997632 113578889
Q ss_pred HhhccCCCEEEEEcCCC
Q 004759 222 ISLLKVGGRIVYSTCSM 238 (732)
Q Consensus 222 l~lLKpGGrLVYSTCSl 238 (732)
.++|||||+||+..+.+
T Consensus 154 ~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 154 LKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp HHTCCTTCEEEEESCSG
T ss_pred HHhcCCCcEEEEeCCCc
Confidence 99999999999876654
No 50
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.12 E-value=1e-10 Score=117.86 Aligned_cols=94 Identities=17% Similarity=0.109 Sum_probs=77.4
Q ss_pred cccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEec
Q 004759 66 VSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNH 144 (732)
Q Consensus 66 ~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~ 144 (732)
+..+...+....++.+|||+|||+|..+..++.. .+.|+|+|+++.++..+++++++.+. .++.+...
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 134 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT-----------GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICG 134 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEEC
Confidence 3444444555568999999999999999999874 37899999999999999999999998 58999999
Q ss_pred ccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCcc
Q 004759 145 EAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 192 (732)
Q Consensus 145 Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtl 192 (732)
|+..++ ....||.|++|+||.+.+..
T Consensus 135 d~~~~~----------------------~~~~~D~v~~~~~~~~~~~~ 160 (241)
T 3gdh_A 135 DFLLLA----------------------SFLKADVVFLSPPWGGPDYA 160 (241)
T ss_dssp CHHHHG----------------------GGCCCSEEEECCCCSSGGGG
T ss_pred ChHHhc----------------------ccCCCCEEEECCCcCCcchh
Confidence 887643 12679999999999986643
No 51
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.11 E-value=3.9e-10 Score=110.74 Aligned_cols=127 Identities=17% Similarity=0.177 Sum_probs=95.8
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
.+.++.+|||+|||+|..+..++.. + .+.|+|+|+++..+..+++++++.+. ++.+...|+..++
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~-~---------~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~---- 110 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL-G---------AKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN---- 110 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT-T---------CSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC----
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc-C---------CCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC----
Confidence 4567899999999999999988764 1 35899999999999999999988877 7888888876642
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
..||.|++|+|+.... + .....+|.++++++ || +|+
T Consensus 111 --------------------~~~D~v~~~~p~~~~~---~-----------------~~~~~~l~~~~~~l--~~--~~~ 146 (207)
T 1wy7_A 111 --------------------SRVDIVIMNPPFGSQR---K-----------------HADRPFLLKAFEIS--DV--VYS 146 (207)
T ss_dssp --------------------CCCSEEEECCCCSSSS---T-----------------TTTHHHHHHHHHHC--SE--EEE
T ss_pred --------------------CCCCEEEEcCCCcccc---C-----------------CchHHHHHHHHHhc--Cc--EEE
Confidence 3699999999964321 0 11235677888887 43 777
Q ss_pred cCCCCCcCcHHHHHHHHHHCCCcEEEE
Q 004759 235 TCSMNPVENEAVVAEILRKCEGSVELV 261 (732)
Q Consensus 235 TCSlnp~ENEaVV~~~L~~~~~~velv 261 (732)
.| +.+.++.+.+..++.+.+..++.+
T Consensus 147 ~~-~~~~~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 147 IH-LAKPEVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp EE-ECCHHHHHHHHHHHHHTTEEEEEE
T ss_pred EE-eCCcCCHHHHHHHHHHCCCeEEEE
Confidence 78 334577788888888876444443
No 52
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.11 E-value=1.8e-10 Score=118.91 Aligned_cols=142 Identities=13% Similarity=0.168 Sum_probs=94.2
Q ss_pred ccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHH---cCCC-ceEEE
Q 004759 67 SMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR---MCTA-NLIVT 142 (732)
Q Consensus 67 Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kR---lg~~-ni~Vt 142 (732)
+++...++.+.++.+|||+|||+|..+..++... +...|+|+|+++..+.++++|+.. .+.. ++.+.
T Consensus 25 ~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~---------~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~ 95 (260)
T 2ozv_A 25 AMLLASLVADDRACRIADLGAGAGAAGMAVAARL---------EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVL 95 (260)
T ss_dssp HHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHC---------TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEE
T ss_pred HHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhC---------CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEE
Confidence 4455556778889999999999999999998873 358999999999999999999988 7765 58899
Q ss_pred ecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHH
Q 004759 143 NHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGI 222 (732)
Q Consensus 143 ~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl 222 (732)
+.|+..+..-.. ........||.|++|||+...+ -.++++..+... ..........++..+.
T Consensus 96 ~~D~~~~~~~~~--------------~~~~~~~~fD~Vv~nPPy~~~~-~~~~~~~~~~~a---~~~~~~~~~~~l~~~~ 157 (260)
T 2ozv_A 96 EADVTLRAKARV--------------EAGLPDEHFHHVIMNPPYNDAG-DRRTPDALKAEA---HAMTEGLFEDWIRTAS 157 (260)
T ss_dssp ECCTTCCHHHHH--------------HTTCCTTCEEEEEECCCC-------------------------CCHHHHHHHHH
T ss_pred eCCHHHHhhhhh--------------hhccCCCCcCEEEECCCCcCCC-CCCCcCHHHHHH---hhcCcCCHHHHHHHHH
Confidence 998876521000 0001236799999999988764 233444322100 0000112467899999
Q ss_pred hhccCCCEEEEEc
Q 004759 223 SLLKVGGRIVYST 235 (732)
Q Consensus 223 ~lLKpGGrLVYST 235 (732)
++|||||+++...
T Consensus 158 ~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 158 AIMVSGGQLSLIS 170 (260)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HHcCCCCEEEEEE
Confidence 9999999998753
No 53
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.11 E-value=1.1e-10 Score=126.77 Aligned_cols=115 Identities=15% Similarity=0.217 Sum_probs=82.7
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCC-CccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPG-CRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~-~~~~~~ 157 (732)
+.+|||+|||+|..|+.+|.. .+.|+|+|+++..+..+++|++.+|..++.+..+|+..+.. +.-...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~-----------~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~ 282 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN-----------FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVRE 282 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG-----------SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCC
T ss_pred CCEEEEccCCCCHHHHHHHhc-----------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccc
Confidence 678999999999999988752 36899999999999999999999999899999998876421 000000
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 237 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS 237 (732)
... ..........||.|++|||+.|. ...++++|++||+|||++|+
T Consensus 283 ~~~------l~~~~~~~~~fD~Vv~dPPr~g~----------------------------~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 283 FNR------LQGIDLKSYQCETIFVDPPRSGL----------------------------DSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp CTT------GGGSCGGGCCEEEEEECCCTTCC----------------------------CHHHHHHHTTSSEEEEEESC
T ss_pred ccc------ccccccccCCCCEEEECcCcccc----------------------------HHHHHHHHhCCCEEEEEECC
Confidence 000 00000011379999999997742 12355667799999999996
Q ss_pred C
Q 004759 238 M 238 (732)
Q Consensus 238 l 238 (732)
-
T Consensus 329 p 329 (369)
T 3bt7_A 329 P 329 (369)
T ss_dssp H
T ss_pred H
Confidence 3
No 54
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.10 E-value=2.3e-10 Score=113.26 Aligned_cols=110 Identities=23% Similarity=0.108 Sum_probs=84.9
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC--CceEEEecccccCCCCccC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT--ANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~--~ni~Vt~~Da~~fp~~~~~ 155 (732)
++.+|||+|||+|..+..++.. ..+.|+|+|+|+..+..++.+++..+. .++.+...|+..++..
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~----------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~--- 119 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR----------QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQ--- 119 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT----------TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTS---
T ss_pred CCCeEEEcCCccCHHHHHHHHc----------cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHh---
Confidence 6889999999999999887653 136899999999999999999999998 6899999988764210
Q ss_pred CCCCCCCcccccccccccccc-ccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHH--HhhccCCCEEE
Q 004759 156 KNFSSASDKGIESESNMGQLL-FDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRG--ISLLKVGGRIV 232 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~-FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rA--l~lLKpGGrLV 232 (732)
..... ||.|++|+|+. .+. ...++... .++|||||+|+
T Consensus 120 ----------------~~~~~~fD~I~~~~~~~-~~~----------------------~~~~l~~~~~~~~LkpgG~l~ 160 (201)
T 2ift_A 120 ----------------PQNQPHFDVVFLDPPFH-FNL----------------------AEQAISLLCENNWLKPNALIY 160 (201)
T ss_dssp ----------------CCSSCCEEEEEECCCSS-SCH----------------------HHHHHHHHHHTTCEEEEEEEE
T ss_pred ----------------hccCCCCCEEEECCCCC-Ccc----------------------HHHHHHHHHhcCccCCCcEEE
Confidence 01257 99999999943 111 11334444 56899999999
Q ss_pred EEcCCCC
Q 004759 233 YSTCSMN 239 (732)
Q Consensus 233 YSTCSln 239 (732)
+++|+..
T Consensus 161 i~~~~~~ 167 (201)
T 2ift_A 161 VETEKDK 167 (201)
T ss_dssp EEEESSS
T ss_pred EEECCCC
Confidence 9998874
No 55
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.09 E-value=6.3e-10 Score=109.29 Aligned_cols=124 Identities=10% Similarity=0.093 Sum_probs=97.8
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
+.++.+|||+|||+|..+..++.. +.+.|+|+|+++..+..++.++...+..++.+...|+..++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----- 122 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL----------GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV----- 122 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC-----
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC-----
Confidence 568899999999999999887753 24699999999999999999999999887888888875532
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
...||.|+++.+. ....+++..+.++|||||++++++
T Consensus 123 ------------------~~~fD~i~~~~~~-------------------------~~~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 123 ------------------DGKFDLIVANILA-------------------------EILLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp ------------------CSCEEEEEEESCH-------------------------HHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred ------------------CCCceEEEECCcH-------------------------HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 1679999997651 112577889999999999999976
Q ss_pred CCCCCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 236 CSMNPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 236 CSlnp~ENEaVV~~~L~~~~~~velvd 262 (732)
... +....+...+++.+ ++++.
T Consensus 160 ~~~---~~~~~~~~~~~~~G--f~~~~ 181 (205)
T 3grz_A 160 IDY---LQLPKIEQALAENS--FQIDL 181 (205)
T ss_dssp EEG---GGHHHHHHHHHHTT--EEEEE
T ss_pred cCc---ccHHHHHHHHHHcC--CceEE
Confidence 554 35666777888765 55554
No 56
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.08 E-value=3.7e-10 Score=116.24 Aligned_cols=129 Identities=16% Similarity=0.094 Sum_probs=97.9
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
.+.++.+|||+|||+|..+..++... |.+.|+++|++++++..+++++++++..|+.+.+.|+..++..
T Consensus 77 ~~~~~~~vLDiG~G~G~~~i~la~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~-- 145 (249)
T 3g89_A 77 LWQGPLRVLDLGTGAGFPGLPLKIVR---------PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLARE-- 145 (249)
T ss_dssp CCCSSCEEEEETCTTTTTHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTS--
T ss_pred ccCCCCEEEEEcCCCCHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcc--
Confidence 34678999999999999999998763 4689999999999999999999999998999999998775421
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
......||.|++.+- ..+ ..++..+.++|||||++++.
T Consensus 146 ----------------~~~~~~fD~I~s~a~----------------------~~~----~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 146 ----------------AGHREAYARAVARAV----------------------APL----CVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp ----------------TTTTTCEEEEEEESS----------------------CCH----HHHHHHHGGGEEEEEEEEEE
T ss_pred ----------------cccCCCceEEEECCc----------------------CCH----HHHHHHHHHHcCCCeEEEEE
Confidence 011267999998421 011 35788899999999999987
Q ss_pred cCCCCCcCcHHHHHHHHHHCCCc
Q 004759 235 TCSMNPVENEAVVAEILRKCEGS 257 (732)
Q Consensus 235 TCSlnp~ENEaVV~~~L~~~~~~ 257 (732)
.+.....| -.-+..+++..+..
T Consensus 184 ~g~~~~~e-~~~~~~~l~~~G~~ 205 (249)
T 3g89_A 184 KGPRVEEE-LAPLPPALERLGGR 205 (249)
T ss_dssp ECSCCHHH-HTTHHHHHHHHTEE
T ss_pred eCCCcHHH-HHHHHHHHHHcCCe
Confidence 77643333 23345666666643
No 57
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.08 E-value=1.3e-09 Score=107.48 Aligned_cols=138 Identities=16% Similarity=0.116 Sum_probs=105.7
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
.+++.++.+|||+|||+|..+..++...+ +.+.|+++|+++..+..+++++...+.+++.+...|+..++.
T Consensus 32 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~- 102 (219)
T 3dh0_A 32 EFGLKEGMTVLDVGTGAGFYLPYLSKMVG--------EKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPL- 102 (219)
T ss_dssp HHTCCTTCEEEESSCTTCTTHHHHHHHHT--------TTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSS-
T ss_pred HhCCCCCCEEEEEecCCCHHHHHHHHHhC--------CCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCC-
Confidence 34678899999999999999999998753 357999999999999999999999998899999998876541
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
....||.|++.. .+..-+ ....+|..+.++|||||+++
T Consensus 103 --------------------~~~~fD~v~~~~------~l~~~~----------------~~~~~l~~~~~~LkpgG~l~ 140 (219)
T 3dh0_A 103 --------------------PDNTVDFIFMAF------TFHELS----------------EPLKFLEELKRVAKPFAYLA 140 (219)
T ss_dssp --------------------CSSCEEEEEEES------CGGGCS----------------SHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------CCCCeeEEEeeh------hhhhcC----------------CHHHHHHHHHHHhCCCeEEE
Confidence 126799999842 111111 12568999999999999999
Q ss_pred EEcCCCCCc---------CcHHHHHHHHHHCCCcEEEEec
Q 004759 233 YSTCSMNPV---------ENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 233 YSTCSlnp~---------ENEaVV~~~L~~~~~~velvd~ 263 (732)
.+++..... -+..-+..+|++.| ++++.+
T Consensus 141 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~ 178 (219)
T 3dh0_A 141 IIDWKKEERDKGPPPEEVYSEWEVGLILEDAG--IRVGRV 178 (219)
T ss_dssp EEEECSSCCSSSCCGGGSCCHHHHHHHHHHTT--CEEEEE
T ss_pred EEEecccccccCCchhcccCHHHHHHHHHHCC--CEEEEE
Confidence 987664432 23567788888876 455443
No 58
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.08 E-value=4.1e-10 Score=107.71 Aligned_cols=130 Identities=18% Similarity=0.135 Sum_probs=100.6
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEeccccc-CC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQH-FP 150 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~-fp 150 (732)
.+++.++.+|||+|||+|..+..++.. .+.|+++|+++.++..++++++..+. .++.+...|+.. ++
T Consensus 28 ~~~~~~~~~vldiG~G~G~~~~~l~~~-----------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 96 (192)
T 1l3i_A 28 LAEPGKNDVAVDVGCGTGGVTLELAGR-----------VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALC 96 (192)
T ss_dssp HHCCCTTCEEEEESCTTSHHHHHHHTT-----------SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHT
T ss_pred hcCCCCCCEEEEECCCCCHHHHHHHHh-----------cCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcc
Confidence 456788999999999999999888764 26899999999999999999999887 678888887654 11
Q ss_pred CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCE
Q 004759 151 GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR 230 (732)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGr 230 (732)
. ...||.|+++.+.. ....++..+.++|+|||+
T Consensus 97 ~----------------------~~~~D~v~~~~~~~-------------------------~~~~~l~~~~~~l~~gG~ 129 (192)
T 1l3i_A 97 K----------------------IPDIDIAVVGGSGG-------------------------ELQEILRIIKDKLKPGGR 129 (192)
T ss_dssp T----------------------SCCEEEEEESCCTT-------------------------CHHHHHHHHHHTEEEEEE
T ss_pred c----------------------CCCCCEEEECCchH-------------------------HHHHHHHHHHHhcCCCcE
Confidence 1 14799999875420 014678899999999999
Q ss_pred EEEEcCCCCCcCcHHHHHHHHHHCCCcEEEEec
Q 004759 231 IVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 231 LVYSTCSlnp~ENEaVV~~~L~~~~~~velvd~ 263 (732)
+++++|+. ++..-+..++++.+..++.+++
T Consensus 130 l~~~~~~~---~~~~~~~~~l~~~g~~~~~~~~ 159 (192)
T 1l3i_A 130 IIVTAILL---ETKFEAMECLRDLGFDVNITEL 159 (192)
T ss_dssp EEEEECBH---HHHHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEecCc---chHHHHHHHHHHCCCceEEEEE
Confidence 99998875 4555667778877655555553
No 59
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.06 E-value=8.8e-10 Score=111.28 Aligned_cols=122 Identities=15% Similarity=0.134 Sum_probs=96.8
Q ss_pred ccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEE
Q 004759 63 QEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVT 142 (732)
Q Consensus 63 Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt 142 (732)
|.++++.....+++.++.+|||+|||+|..+..++.. .+.|+++|+++..+..+++++...+.+++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~ 74 (239)
T 1xxl_A 6 HHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY-----------VQECIGVDATKEMVEVASSFAQEKGVENVRFQ 74 (239)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG-----------SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEE
T ss_pred cCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh-----------CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEE
Confidence 6677777888899999999999999999999888764 25899999999999999999998888889999
Q ss_pred ecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHH
Q 004759 143 NHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGI 222 (732)
Q Consensus 143 ~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl 222 (732)
..|+..+|. ....||.|++... +. .|. ....+|.++.
T Consensus 75 ~~d~~~~~~---------------------~~~~fD~v~~~~~------l~-------~~~---------~~~~~l~~~~ 111 (239)
T 1xxl_A 75 QGTAESLPF---------------------PDDSFDIITCRYA------AH-------HFS---------DVRKAVREVA 111 (239)
T ss_dssp ECBTTBCCS---------------------CTTCEEEEEEESC------GG-------GCS---------CHHHHHHHHH
T ss_pred ecccccCCC---------------------CCCcEEEEEECCc------hh-------hcc---------CHHHHHHHHH
Confidence 888876541 1267999998421 11 110 1246789999
Q ss_pred hhccCCCEEEEEcCCC
Q 004759 223 SLLKVGGRIVYSTCSM 238 (732)
Q Consensus 223 ~lLKpGGrLVYSTCSl 238 (732)
++|||||+++.+++..
T Consensus 112 ~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 112 RVLKQDGRFLLVDHYA 127 (239)
T ss_dssp HHEEEEEEEEEEEECB
T ss_pred HHcCCCcEEEEEEcCC
Confidence 9999999999876543
No 60
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.06 E-value=1.1e-09 Score=104.85 Aligned_cols=133 Identities=18% Similarity=0.192 Sum_probs=99.3
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc--eEEEecccccCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN--LIVTNHEAQHFP 150 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n--i~Vt~~Da~~fp 150 (732)
.+.+.++.+|||+|||+|..+..++.. .+.|+++|+++..+..+++++...+..+ +.+...|+..+.
T Consensus 47 ~~~~~~~~~vLdiG~G~G~~~~~~~~~-----------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (194)
T 1dus_A 47 NVVVDKDDDILDLGCGYGVIGIALADE-----------VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV 115 (194)
T ss_dssp HCCCCTTCEEEEETCTTSHHHHHHGGG-----------SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC
T ss_pred HcccCCCCeEEEeCCCCCHHHHHHHHc-----------CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc
Confidence 446678999999999999999988765 2689999999999999999999988887 888888876521
Q ss_pred CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCE
Q 004759 151 GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR 230 (732)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGr 230 (732)
....||.|++++|... .......++..+.++|+|||+
T Consensus 116 ----------------------~~~~~D~v~~~~~~~~---------------------~~~~~~~~l~~~~~~L~~gG~ 152 (194)
T 1dus_A 116 ----------------------KDRKYNKIITNPPIRA---------------------GKEVLHRIIEEGKELLKDNGE 152 (194)
T ss_dssp ----------------------TTSCEEEEEECCCSTT---------------------CHHHHHHHHHHHHHHEEEEEE
T ss_pred ----------------------ccCCceEEEECCCccc---------------------chhHHHHHHHHHHHHcCCCCE
Confidence 1257999999876321 012345789999999999999
Q ss_pred EEEEcCCCCCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 231 IVYSTCSMNPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 231 LVYSTCSlnp~ENEaVV~~~L~~~~~~velvd 262 (732)
++.++++. ++..-+...|++.-..++++.
T Consensus 153 l~~~~~~~---~~~~~~~~~l~~~~~~~~~~~ 181 (194)
T 1dus_A 153 IWVVIQTK---QGAKSLAKYMKDVFGNVETVT 181 (194)
T ss_dssp EEEEEEST---HHHHHHHHHHHHHHSCCEEEE
T ss_pred EEEEECCC---CChHHHHHHHHHHhcceEEEe
Confidence 99988775 333334555555433455443
No 61
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.05 E-value=4.3e-10 Score=114.42 Aligned_cols=149 Identities=12% Similarity=0.128 Sum_probs=104.0
Q ss_pred hhHHHHHHHhhcccccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCH
Q 004759 42 QTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDV 121 (732)
Q Consensus 42 ~~l~~~~~~l~~~~~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~ 121 (732)
+.+..+.++-. +...+.+..+.....+...++...++.+|||+|||+|..|..+++.+.. .+.|+++|+++
T Consensus 35 ~~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~--------~~~v~~iD~~~ 105 (237)
T 3c3y_A 35 GFLKELREANE-SHPDSYMSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPD--------DGKITAIDFDR 105 (237)
T ss_dssp HHHHHHHHHHT-TSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCT--------TCEEEEEESCH
T ss_pred HHHHHHHHHHH-hcCCCCCCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCC--------CCEEEEEECCH
Confidence 34555555422 1112233334444444444556667889999999999999999998642 58999999999
Q ss_pred HHHHHHHHHHHHcCCC-ceEEEecccccCC-CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhh
Q 004759 122 QRCNLLIHQTKRMCTA-NLIVTNHEAQHFP-GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIW 199 (732)
Q Consensus 122 ~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp-~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w 199 (732)
.++..+++++++.|.. ++.+..+|+..+. .+. ........||.|++|+++.
T Consensus 106 ~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~---------------~~~~~~~~fD~I~~d~~~~------------ 158 (237)
T 3c3y_A 106 EAYEIGLPFIRKAGVEHKINFIESDAMLALDNLL---------------QGQESEGSYDFGFVDADKP------------ 158 (237)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH---------------HSTTCTTCEEEEEECSCGG------------
T ss_pred HHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH---------------hccCCCCCcCEEEECCchH------------
Confidence 9999999999999885 5888888886531 110 0000125799999986532
Q ss_pred hhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCC
Q 004759 200 RKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 239 (732)
Q Consensus 200 ~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSln 239 (732)
.+..++..+.++|+|||+||+.+|-+.
T Consensus 159 -------------~~~~~l~~~~~~L~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 159 -------------NYIKYHERLMKLVKVGGIVAYDNTLWG 185 (237)
T ss_dssp -------------GHHHHHHHHHHHEEEEEEEEEECTTGG
T ss_pred -------------HHHHHHHHHHHhcCCCeEEEEecCCcC
Confidence 124678889999999999999987543
No 62
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.05 E-value=6.5e-10 Score=117.93 Aligned_cols=106 Identities=12% Similarity=0.060 Sum_probs=86.7
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCC
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPG 151 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~ 151 (732)
.++++++|++|||++||||+.|+.++... +.+.|+|+|+|+.++..+++++++.|..++.+..+|+..+|
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~---------~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~- 185 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHV---------YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID- 185 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHT---------TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHc---------cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-
Confidence 35789999999999999999887665442 25799999999999999999999999888999999987643
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
...||+|+++.- . + ...+++..+.++|||||+|
T Consensus 186 ----------------------d~~FDvV~~~a~------~---~----------------d~~~~l~el~r~LkPGG~L 218 (298)
T 3fpf_A 186 ----------------------GLEFDVLMVAAL------A---E----------------PKRRVFRNIHRYVDTETRI 218 (298)
T ss_dssp ----------------------GCCCSEEEECTT------C---S----------------CHHHHHHHHHHHCCTTCEE
T ss_pred ----------------------CCCcCEEEECCC------c---c----------------CHHHHHHHHHHHcCCCcEE
Confidence 267999998432 0 1 1246889999999999999
Q ss_pred EEE
Q 004759 232 VYS 234 (732)
Q Consensus 232 VYS 234 (732)
|..
T Consensus 219 vv~ 221 (298)
T 3fpf_A 219 IYR 221 (298)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
No 63
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.05 E-value=1e-09 Score=107.91 Aligned_cols=108 Identities=16% Similarity=0.134 Sum_probs=86.6
Q ss_pred hhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccC
Q 004759 70 PPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHF 149 (732)
Q Consensus 70 p~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~f 149 (732)
....++++++++|||+|||+|..+.+++.. .+.|+++|+++.++..+++++++++..++.+...|+...
T Consensus 69 ~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 137 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTGSGYQTAILAHL-----------VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG 137 (210)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHH-----------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred HHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-----------CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC
Confidence 344568899999999999999999999886 368999999999999999999999988999999888663
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
+. ....||.|+++..+. ..++ .+.++|||||
T Consensus 138 ~~---------------------~~~~~D~i~~~~~~~------~~~~----------------------~~~~~L~pgG 168 (210)
T 3lbf_A 138 WQ---------------------ARAPFDAIIVTAAPP------EIPT----------------------ALMTQLDEGG 168 (210)
T ss_dssp CG---------------------GGCCEEEEEESSBCS------SCCT----------------------HHHHTEEEEE
T ss_pred Cc---------------------cCCCccEEEEccchh------hhhH----------------------HHHHhcccCc
Confidence 21 126799999975421 1111 3567999999
Q ss_pred EEEEEcCC
Q 004759 230 RIVYSTCS 237 (732)
Q Consensus 230 rLVYSTCS 237 (732)
+||.+...
T Consensus 169 ~lv~~~~~ 176 (210)
T 3lbf_A 169 ILVLPVGE 176 (210)
T ss_dssp EEEEEECS
T ss_pred EEEEEEcC
Confidence 99998665
No 64
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.05 E-value=4.4e-10 Score=113.91 Aligned_cols=127 Identities=16% Similarity=0.099 Sum_probs=95.8
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
++.++.+|||+|||+|..+..++... +.+.|+|+|++++++..+++++++++..++.+..+|+..++..
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-- 135 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICF---------PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR-- 135 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC--
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhC---------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc--
Confidence 45678999999999999999998752 3579999999999999999999999988899999988765420
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
......||.|+++.. . ....++..+.++|||||++++.
T Consensus 136 ----------------~~~~~~fD~V~~~~~----------------------~----~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 136 ----------------KDVRESYDIVTARAV----------------------A----RLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp ----------------TTTTTCEEEEEEECC----------------------S----CHHHHHHHHGGGEEEEEEEEEE
T ss_pred ----------------ccccCCccEEEEecc----------------------C----CHHHHHHHHHHhcCCCCEEEEE
Confidence 001257999998541 0 0246888999999999999998
Q ss_pred cCCCCCcCcHHHHHHHHHHCC
Q 004759 235 TCSMNPVENEAVVAEILRKCE 255 (732)
Q Consensus 235 TCSlnp~ENEaVV~~~L~~~~ 255 (732)
.+.....|-+. +...++.++
T Consensus 174 ~g~~~~~~~~~-~~~~l~~~g 193 (240)
T 1xdz_A 174 KAASAEEELNA-GKKAITTLG 193 (240)
T ss_dssp ECC-CHHHHHH-HHHHHHHTT
T ss_pred eCCCchHHHHH-HHHHHHHcC
Confidence 77664433333 345566665
No 65
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.05 E-value=2.3e-10 Score=115.70 Aligned_cols=112 Identities=11% Similarity=0.067 Sum_probs=88.9
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC--ceEEEecccccCCCC
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQHFPGC 152 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~--ni~Vt~~Da~~fp~~ 152 (732)
..+++.+|||+|||+|..|..|++.+. +.|.|+++|+++.++..+++++++.|.. ++.+..+|+..+..
T Consensus 53 ~~~~~~~vLdiG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~- 123 (221)
T 3dr5_A 53 NGNGSTGAIAITPAAGLVGLYILNGLA--------DNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMS- 123 (221)
T ss_dssp CCTTCCEEEEESTTHHHHHHHHHHHSC--------TTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGG-
T ss_pred CCCCCCCEEEEcCCchHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHH-
Confidence 344556999999999999999999864 2589999999999999999999999976 79999998876421
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
......||.|++|++.. .....+..++++|||||+||
T Consensus 124 ------------------~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~LkpGG~lv 160 (221)
T 3dr5_A 124 ------------------RLANDSYQLVFGQVSPM-------------------------DLKALVDAAWPLLRRGGALV 160 (221)
T ss_dssp ------------------GSCTTCEEEEEECCCTT-------------------------THHHHHHHHHHHEEEEEEEE
T ss_pred ------------------HhcCCCcCeEEEcCcHH-------------------------HHHHHHHHHHHHcCCCcEEE
Confidence 01126799999986411 01346888999999999999
Q ss_pred EEcCCC
Q 004759 233 YSTCSM 238 (732)
Q Consensus 233 YSTCSl 238 (732)
+..+.+
T Consensus 161 ~dn~~~ 166 (221)
T 3dr5_A 161 LADALL 166 (221)
T ss_dssp ETTTTG
T ss_pred EeCCCC
Confidence 987765
No 66
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.05 E-value=1.4e-09 Score=107.98 Aligned_cols=140 Identities=11% Similarity=0.064 Sum_probs=98.6
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..++... |.+.|+|+|+++..+..+.+++++.+..++.+...|+..++..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~---------p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~---- 106 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN---------PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY---- 106 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC---------TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT----
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC---------CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh----
Confidence 468899999999999999998873 3579999999999999999999999988999999998775421
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
.....||.|+++.|.. |.+-. ..... ..+..+|..+.++|||||+|+.+|-
T Consensus 107 ---------------~~~~~~D~i~~~~~~~-----------~~~~~-~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 107 ---------------FEDGEIDRLYLNFSDP-----------WPKKR-HEKRR--LTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp ---------------SCTTCCSEEEEESCCC-----------CCSGG-GGGGS--TTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred ---------------cCCCCCCEEEEECCCC-----------ccccc-hhhhc--cCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 1125799999986621 11100 00000 1256789999999999999998763
Q ss_pred CCCCcCcHHHHHHHHHHCCCcEEEEec
Q 004759 237 SMNPVENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 237 Slnp~ENEaVV~~~L~~~~~~velvd~ 263 (732)
.. .--.-+.+.+.+.+ ++++.+
T Consensus 158 ~~---~~~~~~~~~~~~~g--~~~~~~ 179 (214)
T 1yzh_A 158 NR---GLFEYSLVSFSQYG--MKLNGV 179 (214)
T ss_dssp CH---HHHHHHHHHHHHHT--CEEEEE
T ss_pred CH---HHHHHHHHHHHHCC--Ceeeec
Confidence 21 11123344555554 444443
No 67
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.05 E-value=1.8e-09 Score=113.56 Aligned_cols=114 Identities=16% Similarity=0.145 Sum_probs=90.6
Q ss_pred hcC-CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCC
Q 004759 73 FLD-VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFP 150 (732)
Q Consensus 73 lLd-~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp 150 (732)
.+. ++++.+|||+|||+|..+..+++.. ...|+++|+++.++..+++++++.+.. ++.+...|+..+|
T Consensus 111 ~l~~~~~~~~vLDiGcG~G~~~~~la~~~----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 180 (312)
T 3vc1_A 111 HLGQAGPDDTLVDAGCGRGGSMVMAHRRF----------GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP 180 (312)
T ss_dssp TSCCCCTTCEEEEESCTTSHHHHHHHHHH----------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HhccCCCCCEEEEecCCCCHHHHHHHHHc----------CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC
Confidence 344 7899999999999999999998874 258999999999999999999999875 7999999887654
Q ss_pred CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCE
Q 004759 151 GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR 230 (732)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGr 230 (732)
. ....||.|++. +++. . + . +.++|..+.++|||||+
T Consensus 181 ~---------------------~~~~fD~V~~~------~~l~-------~--------~-~-~~~~l~~~~~~LkpgG~ 216 (312)
T 3vc1_A 181 F---------------------DKGAVTASWNN------ESTM-------Y--------V-D-LHDLFSEHSRFLKVGGR 216 (312)
T ss_dssp C---------------------CTTCEEEEEEE------SCGG-------G--------S-C-HHHHHHHHHHHEEEEEE
T ss_pred C---------------------CCCCEeEEEEC------Cchh-------h--------C-C-HHHHHHHHHHHcCCCcE
Confidence 1 12679999972 1111 0 1 0 56789999999999999
Q ss_pred EEEEcCCCCC
Q 004759 231 IVYSTCSMNP 240 (732)
Q Consensus 231 LVYSTCSlnp 240 (732)
|++++.....
T Consensus 217 l~~~~~~~~~ 226 (312)
T 3vc1_A 217 YVTITGCWNP 226 (312)
T ss_dssp EEEEEEEECT
T ss_pred EEEEEccccc
Confidence 9998755443
No 68
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.04 E-value=2.3e-10 Score=120.82 Aligned_cols=137 Identities=12% Similarity=-0.009 Sum_probs=96.6
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc----CCCceEEEecccccCCCCc
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl----g~~ni~Vt~~Da~~fp~~~ 153 (732)
.+.+|||+|||+|+.+..++... +.+.|+++|+|+..+..+++++.++ +.+++.+...|+..+..
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~-- 158 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD---------SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVR-- 158 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST---------TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGG--
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC---------CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh--
Confidence 45799999999999999887642 2479999999999999999987652 24678999998876421
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
.....||.|++|+|+.+.|.. .+-.+.+++..+.++|+|||+||+
T Consensus 159 ------------------~~~~~fD~Ii~d~~~~~~~~~-----------------~~l~~~~~l~~~~~~LkpgG~lv~ 203 (296)
T 1inl_A 159 ------------------KFKNEFDVIIIDSTDPTAGQG-----------------GHLFTEEFYQACYDALKEDGVFSA 203 (296)
T ss_dssp ------------------GCSSCEEEEEEEC---------------------------CCSHHHHHHHHHHEEEEEEEEE
T ss_pred ------------------hCCCCceEEEEcCCCcccCch-----------------hhhhHHHHHHHHHHhcCCCcEEEE
Confidence 012579999999986422210 001235788999999999999999
Q ss_pred EcCC--CCCcCcHHHHHHHHHHCCCcEEEE
Q 004759 234 STCS--MNPVENEAVVAEILRKCEGSVELV 261 (732)
Q Consensus 234 STCS--lnp~ENEaVV~~~L~~~~~~velv 261 (732)
.+|+ +++.+...+++.+.+..+ .+.+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~l~~~F~-~v~~~ 232 (296)
T 1inl_A 204 ETEDPFYDIGWFKLAYRRISKVFP-ITRVY 232 (296)
T ss_dssp ECCCTTTTHHHHHHHHHHHHHHCS-EEEEE
T ss_pred EccCcccCHHHHHHHHHHHHHHCC-ceEEE
Confidence 9998 556666677666555433 44443
No 69
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.03 E-value=5.3e-10 Score=110.82 Aligned_cols=109 Identities=19% Similarity=0.104 Sum_probs=82.7
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
++.+|||+|||+|..+..++.. ....|+|+|+++..+..++++++..+..++.+.+.|+..+..
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~----------~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~------ 117 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR----------YAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLA------ 117 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT----------TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHS------
T ss_pred CCCeEEEeCCCcCHHHHHHHhc----------CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHh------
Confidence 6889999999999999887654 125899999999999999999999988889999998766321
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHH--HhhccCCCEEEEEc
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRG--ISLLKVGGRIVYST 235 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rA--l~lLKpGGrLVYST 235 (732)
.....||.|++|+|.. .+. ...++... .++|+|||+|++++
T Consensus 118 --------------~~~~~fD~V~~~~p~~-~~~----------------------~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 118 --------------QKGTPHNIVFVDPPFR-RGL----------------------LEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp --------------SCCCCEEEEEECCSSS-TTT----------------------HHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred --------------hcCCCCCEEEECCCCC-CCc----------------------HHHHHHHHHhcCccCCCcEEEEEE
Confidence 0125799999999932 111 01223333 44699999999998
Q ss_pred CCCC
Q 004759 236 CSMN 239 (732)
Q Consensus 236 CSln 239 (732)
|+..
T Consensus 161 ~~~~ 164 (202)
T 2fpo_A 161 EVEN 164 (202)
T ss_dssp EGGG
T ss_pred CCCc
Confidence 8754
No 70
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.03 E-value=4.7e-10 Score=113.37 Aligned_cols=122 Identities=11% Similarity=0.081 Sum_probs=94.2
Q ss_pred EccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceE
Q 004759 62 RQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLI 140 (732)
Q Consensus 62 ~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~ 140 (732)
.|.....+...++...++.+|||+|||+|..|..++... +.+.|+++|+++.++..+++++++.+.. ++.
T Consensus 55 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~ 125 (232)
T 3ntv_A 55 VDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASIS---------DDIHVTTIERNETMIQYAKQNLATYHFENQVR 125 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC---------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEE
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEE
Confidence 344444455556667789999999999999999998742 3689999999999999999999999975 799
Q ss_pred EEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHH
Q 004759 141 VTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMR 220 (732)
Q Consensus 141 Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~r 220 (732)
+...|+..+.. ......||.|++|.++.. +..++..
T Consensus 126 ~~~~d~~~~~~-------------------~~~~~~fD~V~~~~~~~~-------------------------~~~~l~~ 161 (232)
T 3ntv_A 126 IIEGNALEQFE-------------------NVNDKVYDMIFIDAAKAQ-------------------------SKKFFEI 161 (232)
T ss_dssp EEESCGGGCHH-------------------HHTTSCEEEEEEETTSSS-------------------------HHHHHHH
T ss_pred EEECCHHHHHH-------------------hhccCCccEEEEcCcHHH-------------------------HHHHHHH
Confidence 99998866311 000267999999865322 2457889
Q ss_pred HHhhccCCCEEEEEcC
Q 004759 221 GISLLKVGGRIVYSTC 236 (732)
Q Consensus 221 Al~lLKpGGrLVYSTC 236 (732)
+.++|||||+||+..+
T Consensus 162 ~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 162 YTPLLKHQGLVITDNV 177 (232)
T ss_dssp HGGGEEEEEEEEEECT
T ss_pred HHHhcCCCeEEEEeeC
Confidence 9999999999998543
No 71
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.02 E-value=1.1e-09 Score=109.46 Aligned_cols=118 Identities=14% Similarity=0.122 Sum_probs=89.4
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..|+... |...|+|+|+++.++..+.+++++.+..|+.+..+|+..++..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~---------p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~---- 103 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN---------PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDV---- 103 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC---------TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHH----
T ss_pred CCCceEEEEecCCCHHHHHHHHHC---------CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh----
Confidence 467899999999999999998873 4579999999999999999999999999999999998764321
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
.....||.|++..|+. |.+-. .....+ .+..+|..+.++|||||+|+++|-
T Consensus 104 ---------------~~~~~~d~v~~~~~~p-----------~~~~~-~~~~rl--~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 104 ---------------FEPGEVKRVYLNFSDP-----------WPKKR-HEKRRL--TYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp ---------------CCTTSCCEEEEESCCC-----------CCSGG-GGGGST--TSHHHHHHHHHHHTTSCEEEEEES
T ss_pred ---------------cCcCCcCEEEEECCCC-----------CcCcc-cccccc--CcHHHHHHHHHHcCCCCEEEEEeC
Confidence 1125699999865521 11100 000111 256789999999999999999863
No 72
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.02 E-value=1.4e-09 Score=111.82 Aligned_cols=112 Identities=20% Similarity=0.217 Sum_probs=91.8
Q ss_pred hhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc-C--CCceEEEecccc
Q 004759 71 PLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-C--TANLIVTNHEAQ 147 (732)
Q Consensus 71 ~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl-g--~~ni~Vt~~Da~ 147 (732)
...+++.++.+|||+|||+|..+..++..++ +.+.|+++|+++.++..++++++.. | ..++.+...|+.
T Consensus 92 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~ 163 (280)
T 1i9g_A 92 VHEGDIFPGARVLEAGAGSGALTLSLLRAVG--------PAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLA 163 (280)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHHC--------TTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG
T ss_pred HHHcCCCCCCEEEEEcccccHHHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchH
Confidence 3456889999999999999999999998764 3589999999999999999999887 6 678899888876
Q ss_pred cCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccC
Q 004759 148 HFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKV 227 (732)
Q Consensus 148 ~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKp 227 (732)
..+. ....||.|++|+| +.| .+|.++.++|+|
T Consensus 164 ~~~~---------------------~~~~~D~v~~~~~-----------~~~----------------~~l~~~~~~L~p 195 (280)
T 1i9g_A 164 DSEL---------------------PDGSVDRAVLDML-----------APW----------------EVLDAVSRLLVA 195 (280)
T ss_dssp GCCC---------------------CTTCEEEEEEESS-----------CGG----------------GGHHHHHHHEEE
T ss_pred hcCC---------------------CCCceeEEEECCc-----------CHH----------------HHHHHHHHhCCC
Confidence 6421 1257999999876 111 358888999999
Q ss_pred CCEEEEEcCCC
Q 004759 228 GGRIVYSTCSM 238 (732)
Q Consensus 228 GGrLVYSTCSl 238 (732)
||+|+.++++.
T Consensus 196 gG~l~~~~~~~ 206 (280)
T 1i9g_A 196 GGVLMVYVATV 206 (280)
T ss_dssp EEEEEEEESSH
T ss_pred CCEEEEEeCCH
Confidence 99999988765
No 73
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.02 E-value=2e-10 Score=114.23 Aligned_cols=130 Identities=13% Similarity=0.122 Sum_probs=95.5
Q ss_pred EEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-
Q 004759 60 ITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN- 138 (732)
Q Consensus 60 i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n- 138 (732)
+..+.....+...++...++.+|||+|||+|..|..++..+. +.+.|+++|+++.++..+++++++.+..+
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ 117 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALP--------KDGTLITCDVDEKSTALAKEYWEKAGLSDK 117 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCC--------TTCEEEEEESCHHHHHHHHHHHHHTTCTTT
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCC--------CCCEEEEEeCCHHHHHHHHHHHHHCCCCCc
Confidence 333444444445555667889999999999999999988653 15899999999999999999999999864
Q ss_pred eEEEecccccCC-CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHH
Q 004759 139 LIVTNHEAQHFP-GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQI 217 (732)
Q Consensus 139 i~Vt~~Da~~fp-~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~I 217 (732)
+.+..+|+..+. .+. .......||.|++|++. ..+..+
T Consensus 118 v~~~~~d~~~~~~~~~----------------~~~~~~~fD~v~~~~~~-------------------------~~~~~~ 156 (225)
T 3tr6_A 118 IGLRLSPAKDTLAELI----------------HAGQAWQYDLIYIDADK-------------------------ANTDLY 156 (225)
T ss_dssp EEEEESCHHHHHHHHH----------------TTTCTTCEEEEEECSCG-------------------------GGHHHH
T ss_pred eEEEeCCHHHHHHHhh----------------hccCCCCccEEEECCCH-------------------------HHHHHH
Confidence 888888875421 100 00011579999998751 112457
Q ss_pred HHHHHhhccCCCEEEEEcCCC
Q 004759 218 AMRGISLLKVGGRIVYSTCSM 238 (732)
Q Consensus 218 L~rAl~lLKpGGrLVYSTCSl 238 (732)
+..+.++|||||+||...+.+
T Consensus 157 l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 157 YEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp HHHHHHHEEEEEEEEEECSSG
T ss_pred HHHHHHhcCCCcEEEEeCCCc
Confidence 888999999999999875553
No 74
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.02 E-value=1e-09 Score=107.14 Aligned_cols=146 Identities=14% Similarity=0.159 Sum_probs=88.6
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
++++.+|||+|||||+.|..+++.++. +.+.|+|+|+++.. ..+++.+...|+...+...+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~-------~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~ 81 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKN-------YKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIK 81 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTT-------SCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCC-------CCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhc
Confidence 467899999999999999999987531 14899999999831 235677888887664310000
Q ss_pred C--CCCCCCccccccc--cccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 156 K--NFSSASDKGIESE--SNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 156 ~--~~~~~~~~~~~~~--~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
. ............. .......||.|++|.++...|.- .++. .....++..+|..+.++|||||++
T Consensus 82 ~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~--~~d~---------~~~~~~~~~~l~~~~~~LkpgG~l 150 (201)
T 2plw_A 82 NINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNK--IDDH---------LNSCELTLSITHFMEQYINIGGTY 150 (201)
T ss_dssp ----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCH--HHHH---------HHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred cccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCc--ccCH---------HHHHHHHHHHHHHHHHHccCCCEE
Confidence 0 0000000000000 00123579999999765443420 0111 122345678999999999999999
Q ss_pred EEEcCCCCCcCcHHHHHHHHHH
Q 004759 232 VYSTCSMNPVENEAVVAEILRK 253 (732)
Q Consensus 232 VYSTCSlnp~ENEaVV~~~L~~ 253 (732)
+.++.. .++...+...|+.
T Consensus 151 v~~~~~---~~~~~~l~~~l~~ 169 (201)
T 2plw_A 151 IVKMYL---GSQTNNLKTYLKG 169 (201)
T ss_dssp EEEEEC---STTHHHHHHHHHT
T ss_pred EEEEeC---CCCHHHHHHHHHH
Confidence 986543 2555556666665
No 75
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.01 E-value=5.8e-09 Score=106.55 Aligned_cols=125 Identities=15% Similarity=0.134 Sum_probs=98.7
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeccccc-CCCCc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQH-FPGCR 153 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~-fp~~~ 153 (732)
+.+|++|||+|||+|..++.++.. .+.+.|+|+|+++..+..+++|++++|.. ++.+..+|+.. ++
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~---------~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~--- 80 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVER---------GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFE--- 80 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT---------TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC---
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHh---------CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcc---
Confidence 568999999999999999998775 14689999999999999999999999986 48888888743 11
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
....||.|++ .|.| ..+-.+||..+...|++||++|.
T Consensus 81 -------------------~~~~~D~Ivi----aG~G--------------------g~~i~~Il~~~~~~L~~~~~lVl 117 (225)
T 3kr9_A 81 -------------------ETDQVSVITI----AGMG--------------------GRLIARILEEGLGKLANVERLIL 117 (225)
T ss_dssp -------------------GGGCCCEEEE----EEEC--------------------HHHHHHHHHHTGGGCTTCCEEEE
T ss_pred -------------------cCcCCCEEEE----cCCC--------------------hHHHHHHHHHHHHHhCCCCEEEE
Confidence 0126998886 2333 13446799999999999999999
Q ss_pred EcCCCCCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 234 STCSMNPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 234 STCSlnp~ENEaVV~~~L~~~~~~velvd 262 (732)
+.- .....|...|.++| +.+++
T Consensus 118 q~~-----~~~~~vr~~L~~~G--f~i~~ 139 (225)
T 3kr9_A 118 QPN-----NREDDLRIWLQDHG--FQIVA 139 (225)
T ss_dssp EES-----SCHHHHHHHHHHTT--EEEEE
T ss_pred ECC-----CCHHHHHHHHHHCC--CEEEE
Confidence 654 47888889998876 55554
No 76
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.00 E-value=2.6e-09 Score=113.80 Aligned_cols=110 Identities=19% Similarity=0.219 Sum_probs=84.5
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC-----------CCceE
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC-----------TANLI 140 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg-----------~~ni~ 140 (732)
..+++.+|.+|||+|||+|..+..++..++ +.+.|+|+|+++.++..+++++.+++ ..++.
T Consensus 99 ~~l~~~~g~~VLDiG~G~G~~~~~la~~~g--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 99 SMMDINPGDTVLEAGSGSGGMSLFLSKAVG--------SQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp HHHTCCTTCEEEEECCTTSHHHHHHHHHHC--------TTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred HhcCCCCCCEEEEeCCCcCHHHHHHHHHhC--------CCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 456889999999999999999999998764 35899999999999999999998753 35788
Q ss_pred EEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHH
Q 004759 141 VTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMR 220 (732)
Q Consensus 141 Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~r 220 (732)
+...|+..+.. ......||+|++|+|.. | .++..
T Consensus 171 ~~~~d~~~~~~-------------------~~~~~~fD~V~~~~~~~--------------~-------------~~l~~ 204 (336)
T 2b25_A 171 FIHKDISGATE-------------------DIKSLTFDAVALDMLNP--------------H-------------VTLPV 204 (336)
T ss_dssp EEESCTTCCC--------------------------EEEEEECSSST--------------T-------------TTHHH
T ss_pred EEECChHHccc-------------------ccCCCCeeEEEECCCCH--------------H-------------HHHHH
Confidence 88888766421 01124699999987621 1 15788
Q ss_pred HHhhccCCCEEEEEc
Q 004759 221 GISLLKVGGRIVYST 235 (732)
Q Consensus 221 Al~lLKpGGrLVYST 235 (732)
+.++|||||+|+..+
T Consensus 205 ~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 205 FYPHLKHGGVCAVYV 219 (336)
T ss_dssp HGGGEEEEEEEEEEE
T ss_pred HHHhcCCCcEEEEEe
Confidence 899999999998543
No 77
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.98 E-value=2.4e-09 Score=101.74 Aligned_cols=127 Identities=18% Similarity=0.160 Sum_probs=98.1
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
.+++.++.+|||+|||+|..+..++. . ...|+++|+++..+..+++++++.+..++.+...|+.. +
T Consensus 30 ~~~~~~~~~vLdiG~G~G~~~~~l~~--~---------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~-- 95 (183)
T 2yxd_A 30 KLNLNKDDVVVDVGCGSGGMTVEIAK--R---------CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V-- 95 (183)
T ss_dssp HHCCCTTCEEEEESCCCSHHHHHHHT--T---------SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H--
T ss_pred HcCCCCCCEEEEeCCCCCHHHHHHHh--c---------CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c--
Confidence 34677899999999999999998876 2 47999999999999999999999998888888887654 1
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
.....||.|+++.+ . + ...++..+.++ |||+++
T Consensus 96 -------------------~~~~~~D~i~~~~~----~----~------------------~~~~l~~~~~~--~gG~l~ 128 (183)
T 2yxd_A 96 -------------------LDKLEFNKAFIGGT----K----N------------------IEKIIEILDKK--KINHIV 128 (183)
T ss_dssp -------------------GGGCCCSEEEECSC----S----C------------------HHHHHHHHHHT--TCCEEE
T ss_pred -------------------ccCCCCcEEEECCc----c----c------------------HHHHHHHHhhC--CCCEEE
Confidence 11157999999766 0 1 12456666666 999999
Q ss_pred EEcCCCCCcCcHHHHHHHHHHCCCcEEEEec
Q 004759 233 YSTCSMNPVENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 233 YSTCSlnp~ENEaVV~~~L~~~~~~velvd~ 263 (732)
+++|+. ++-.-+...|++++..++.+..
T Consensus 129 ~~~~~~---~~~~~~~~~l~~~g~~~~~~~~ 156 (183)
T 2yxd_A 129 ANTIVL---ENAAKIINEFESRGYNVDAVNV 156 (183)
T ss_dssp EEESCH---HHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEeccc---ccHHHHHHHHHHcCCeEEEEEe
Confidence 998876 4445567788888766666653
No 78
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.98 E-value=2.4e-10 Score=120.87 Aligned_cols=134 Identities=18% Similarity=0.151 Sum_probs=91.4
Q ss_pred ccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEE
Q 004759 63 QEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVT 142 (732)
Q Consensus 63 Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt 142 (732)
+.......+..+++.++++|||+|||+|..|..|++. .+.|+|+|+|+..+..+++++++.+.+++.+.
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-----------~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~ 95 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-----------AKKVITIDIDSRMISEVKKRCLYEGYNNLEVY 95 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-----------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC-
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-----------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEE
Confidence 4433444445678889999999999999999998764 36899999999999999999988888888888
Q ss_pred ecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccc--cccchHHHHHHHHHH
Q 004759 143 NHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVG--LGNGLHSLQVQIAMR 220 (732)
Q Consensus 143 ~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~--~~~~L~~lQ~~IL~r 220 (732)
.+|+..++. ..||.|++|+|+.... |.+++-.... ......-.|. ..
T Consensus 96 ~~D~~~~~~-----------------------~~~D~Vv~n~py~~~~-----~~~~~ll~~~~~~~~~~l~~Q~---e~ 144 (299)
T 2h1r_A 96 EGDAIKTVF-----------------------PKFDVCTANIPYKISS-----PLIFKLISHRPLFKCAVLMFQK---EF 144 (299)
T ss_dssp ---CCSSCC-----------------------CCCSEEEEECCGGGHH-----HHHHHHHHCSSCCSEEEEEEEH---HH
T ss_pred ECchhhCCc-----------------------ccCCEEEEcCCccccc-----HHHHHHHhcCCccceeeehHHH---HH
Confidence 888866431 3699999999976432 2221110000 0001111232 45
Q ss_pred HHhhccCCCEEEEEcCCC
Q 004759 221 GISLLKVGGRIVYSTCSM 238 (732)
Q Consensus 221 Al~lLKpGGrLVYSTCSl 238 (732)
|.++++++|...|+|||.
T Consensus 145 a~rlla~~G~~~y~~ls~ 162 (299)
T 2h1r_A 145 AERMLANVGDSNYSRLTI 162 (299)
T ss_dssp HHHHTCCTTSTTCCHHHH
T ss_pred HHHHhcCCCCcchhHHHH
Confidence 677899999989988875
No 79
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.98 E-value=1.1e-10 Score=119.45 Aligned_cols=148 Identities=13% Similarity=0.105 Sum_probs=105.0
Q ss_pred hhHHHHHHHhhcccccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCH
Q 004759 42 QTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDV 121 (732)
Q Consensus 42 ~~l~~~~~~l~~~~~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~ 121 (732)
+.+..+..+.. +...|.+..+.....+...++...++.+|||+|||+|..|..|++.+. +.|.|+++|+++
T Consensus 25 ~~l~~~~~~~~-~~~~~~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~--------~~~~v~~iD~~~ 95 (242)
T 3r3h_A 25 PALAALRKETS-TMELANMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALP--------DDGQVITCDINE 95 (242)
T ss_dssp HHHHHHHHTTS-SSGGGGTSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSC--------TTCEEEEEECCC
T ss_pred HHHHHHHHHHH-hCCCCCCccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCC--------CCCEEEEEECCH
Confidence 44555555422 122334445555555666666677888999999999999999998753 258999999999
Q ss_pred HHHHHHHHHHHHcCCC-ceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhh
Q 004759 122 QRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWR 200 (732)
Q Consensus 122 ~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~ 200 (732)
.++..+++++++.|.. ++.+..+|+..+..... .......||.|++|+++.
T Consensus 96 ~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~---------------~~~~~~~fD~V~~d~~~~------------- 147 (242)
T 3r3h_A 96 GWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLL---------------NEGGEHQFDFIFIDADKT------------- 147 (242)
T ss_dssp SSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHH---------------HHHCSSCEEEEEEESCGG-------------
T ss_pred HHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHh---------------hccCCCCEeEEEEcCChH-------------
Confidence 9999999999999975 79999998865321000 000126799999987511
Q ss_pred hcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCC
Q 004759 201 KWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 238 (732)
Q Consensus 201 ~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSl 238 (732)
.....+..++++|||||+||+..+.+
T Consensus 148 ------------~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 148 ------------NYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp ------------GHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred ------------HhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 11346888999999999999865543
No 80
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.98 E-value=4.5e-09 Score=106.26 Aligned_cols=113 Identities=16% Similarity=0.141 Sum_probs=89.8
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~Vt~~Da~~fp~~ 152 (732)
..+.++.+|||+|||+|..+..+++.. .+.|+++|+++..+..++++++..+..+ +.+...|+..+|.
T Consensus 42 ~~~~~~~~vLDiG~G~G~~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~- 110 (257)
T 3f4k_A 42 NELTDDAKIADIGCGTGGQTLFLADYV----------KGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF- 110 (257)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHC----------CSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS-
T ss_pred hcCCCCCeEEEeCCCCCHHHHHHHHhC----------CCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC-
Confidence 367889999999999999999998873 2499999999999999999999998765 8899998876542
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
....||.|++... +... + ..++|..+.++|||||+++
T Consensus 111 --------------------~~~~fD~v~~~~~------l~~~-~----------------~~~~l~~~~~~L~pgG~l~ 147 (257)
T 3f4k_A 111 --------------------QNEELDLIWSEGA------IYNI-G----------------FERGMNEWSKYLKKGGFIA 147 (257)
T ss_dssp --------------------CTTCEEEEEEESC------SCCC-C----------------HHHHHHHHHTTEEEEEEEE
T ss_pred --------------------CCCCEEEEEecCh------Hhhc-C----------------HHHHHHHHHHHcCCCcEEE
Confidence 1267999998532 1110 0 1358899999999999999
Q ss_pred EEcCCCCC
Q 004759 233 YSTCSMNP 240 (732)
Q Consensus 233 YSTCSlnp 240 (732)
.++++...
T Consensus 148 ~~~~~~~~ 155 (257)
T 3f4k_A 148 VSEASWFT 155 (257)
T ss_dssp EEEEEESS
T ss_pred EEEeeccC
Confidence 99876443
No 81
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.98 E-value=4.6e-10 Score=110.99 Aligned_cols=122 Identities=10% Similarity=0.037 Sum_probs=92.0
Q ss_pred EccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceE
Q 004759 62 RQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLI 140 (732)
Q Consensus 62 ~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~ 140 (732)
.+.....+...++...++.+|||+|||+|..|..++..+.. .+.|+++|+++.++..+++++++.+.. ++.
T Consensus 40 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~--------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~ 111 (210)
T 3c3p_A 40 VDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISI--------SSRVVMIDPDRDNVEHARRMLHDNGLIDRVE 111 (210)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCT--------TCEEEEEESCHHHHHHHHHHHHHHSGGGGEE
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCC--------CCEEEEEECCHHHHHHHHHHHHHCCCCceEE
Confidence 33333344444445567889999999999999999886531 589999999999999999999988875 588
Q ss_pred EEecccccC-CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHH
Q 004759 141 VTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAM 219 (732)
Q Consensus 141 Vt~~Da~~f-p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~ 219 (732)
+...|+..+ +. . .. ||.|++|.++. .+..++.
T Consensus 112 ~~~~d~~~~~~~--------------------~-~~-fD~v~~~~~~~-------------------------~~~~~l~ 144 (210)
T 3c3p_A 112 LQVGDPLGIAAG--------------------Q-RD-IDILFMDCDVF-------------------------NGADVLE 144 (210)
T ss_dssp EEESCHHHHHTT--------------------C-CS-EEEEEEETTTS-------------------------CHHHHHH
T ss_pred EEEecHHHHhcc--------------------C-CC-CCEEEEcCChh-------------------------hhHHHHH
Confidence 888887653 21 1 15 99999985421 1245788
Q ss_pred HHHhhccCCCEEEEEcCCC
Q 004759 220 RGISLLKVGGRIVYSTCSM 238 (732)
Q Consensus 220 rAl~lLKpGGrLVYSTCSl 238 (732)
.+.++|||||+|++..+.+
T Consensus 145 ~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 145 RMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp HHGGGEEEEEEEEEESSSS
T ss_pred HHHHhcCCCeEEEEECccc
Confidence 8999999999999987654
No 82
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.97 E-value=1.7e-09 Score=109.11 Aligned_cols=120 Identities=18% Similarity=0.138 Sum_probs=89.2
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..+|... |...|+|+|+++.++..++.++++.+..|+.+..+|+..+..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~---------p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~----- 98 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR---------PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLH----- 98 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC---------TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHH-----
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC---------CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHH-----
Confidence 468899999999999999998863 457899999999999999999999999999999999876311
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
.......||.|++..|.. |.+ ..-..-.-.|..++..+.++|||||+|+.+|-
T Consensus 99 -------------~~~~~~~~d~v~~~~~~p-----------~~~---~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 99 -------------KMIPDNSLRMVQLFFPDP-----------WHK---ARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp -------------HHSCTTCEEEEEEESCCC-----------CCS---GGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred -------------HHcCCCChheEEEeCCCC-----------ccc---hhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 001236799999874421 111 00000001235689999999999999998874
Q ss_pred C
Q 004759 237 S 237 (732)
Q Consensus 237 S 237 (732)
.
T Consensus 152 ~ 152 (218)
T 3dxy_A 152 W 152 (218)
T ss_dssp C
T ss_pred C
Confidence 3
No 83
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.97 E-value=2.4e-09 Score=113.56 Aligned_cols=108 Identities=15% Similarity=0.239 Sum_probs=86.9
Q ss_pred hhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCC
Q 004759 71 PLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 150 (732)
Q Consensus 71 ~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp 150 (732)
...++++++++|||+|||+|..+..+++.... .+.|+++|+++.++..+++++++.+..++.+...|+...+
T Consensus 68 ~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~--------~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~ 139 (317)
T 1dl5_A 68 MEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGE--------KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV 139 (317)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHHCT--------TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred HHhcCCCCcCEEEEecCCchHHHHHHHHhcCC--------CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc
Confidence 34568899999999999999999999987531 4789999999999999999999999888888888876632
Q ss_pred CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCE
Q 004759 151 GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR 230 (732)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGr 230 (732)
. ....||+|+++.++...+ ..+.++|||||+
T Consensus 140 ~---------------------~~~~fD~Iv~~~~~~~~~----------------------------~~~~~~LkpgG~ 170 (317)
T 1dl5_A 140 P---------------------EFSPYDVIFVTVGVDEVP----------------------------ETWFTQLKEGGR 170 (317)
T ss_dssp G---------------------GGCCEEEEEECSBBSCCC----------------------------HHHHHHEEEEEE
T ss_pred c---------------------cCCCeEEEEEcCCHHHHH----------------------------HHHHHhcCCCcE
Confidence 1 125799999987743211 245678999999
Q ss_pred EEEEc
Q 004759 231 IVYST 235 (732)
Q Consensus 231 LVYST 235 (732)
|+.+.
T Consensus 171 lvi~~ 175 (317)
T 1dl5_A 171 VIVPI 175 (317)
T ss_dssp EEEEB
T ss_pred EEEEE
Confidence 99984
No 84
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.96 E-value=2.9e-09 Score=108.35 Aligned_cols=139 Identities=15% Similarity=0.152 Sum_probs=96.0
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc--------CCCceEEEecccc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM--------CTANLIVTNHEAQ 147 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl--------g~~ni~Vt~~Da~ 147 (732)
+.++.+|||+|||+|..+..++... +.+.|+|+|+++.++..+..+++.+ +..|+.+...|+.
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~---------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~ 117 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF---------PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAM 117 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS---------TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC---------CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHH
Confidence 4578899999999999999998873 3579999999999999999999877 7789999999987
Q ss_pred cC-CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhcc
Q 004759 148 HF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK 226 (732)
Q Consensus 148 ~f-p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLK 226 (732)
.+ +.. .....||.|++..|.. |.+-... ...+ .+..++..+.++|+
T Consensus 118 ~~l~~~-------------------~~~~~~d~v~~~~p~p-----------~~k~~~~-~~r~--~~~~~l~~~~~~Lk 164 (246)
T 2vdv_E 118 KFLPNF-------------------FEKGQLSKMFFCFPDP-----------HFKQRKH-KARI--ITNTLLSEYAYVLK 164 (246)
T ss_dssp SCGGGT-------------------SCTTCEEEEEEESCCC-----------C-------CSSC--CCHHHHHHHHHHEE
T ss_pred HHHHHh-------------------ccccccCEEEEECCCc-----------ccccchh-HHhh--ccHHHHHHHHHHcC
Confidence 63 210 1236789998765422 2110000 0011 24688999999999
Q ss_pred CCCEEEEEcCCCCCcCcHHHHHHHHHHCCCcEEE
Q 004759 227 VGGRIVYSTCSMNPVENEAVVAEILRKCEGSVEL 260 (732)
Q Consensus 227 pGGrLVYSTCSlnp~ENEaVV~~~L~~~~~~vel 260 (732)
|||+|+.+|-. .+-...+...+..++. ++.
T Consensus 165 pgG~l~~~td~---~~~~~~~~~~~~~~~~-~~~ 194 (246)
T 2vdv_E 165 EGGVVYTITDV---KDLHEWMVKHLEEHPL-FER 194 (246)
T ss_dssp EEEEEEEEESC---HHHHHHHHHHHHHSTT-EEE
T ss_pred CCCEEEEEecc---HHHHHHHHHHHHhCcC-eEe
Confidence 99999986532 2323444555555543 444
No 85
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.96 E-value=3.6e-09 Score=106.38 Aligned_cols=110 Identities=27% Similarity=0.427 Sum_probs=84.8
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
++++++.+|||++||+|..+..+++.++ +.+.|+|+|+++..+..+.+++++. .++.+...|+.....+
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g--------~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~- 141 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVG--------PDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKY- 141 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHC--------TTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGG-
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhC--------CCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhh-
Confidence 4678999999999999999999998863 2579999999999888888888775 6788888887653211
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
......||.|++|+| .++ ....++.++.++|||||+++.
T Consensus 142 -----------------~~~~~~~D~V~~~~~---------~~~---------------~~~~~~~~~~~~LkpgG~l~i 180 (233)
T 2ipx_A 142 -----------------RMLIAMVDVIFADVA---------QPD---------------QTRIVALNAHTFLRNGGHFVI 180 (233)
T ss_dssp -----------------GGGCCCEEEEEECCC---------CTT---------------HHHHHHHHHHHHEEEEEEEEE
T ss_pred -----------------cccCCcEEEEEEcCC---------Ccc---------------HHHHHHHHHHHHcCCCeEEEE
Confidence 011257999999887 111 113467789999999999998
Q ss_pred Ec
Q 004759 234 ST 235 (732)
Q Consensus 234 ST 235 (732)
++
T Consensus 181 ~~ 182 (233)
T 2ipx_A 181 SI 182 (233)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 86
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.95 E-value=3.4e-09 Score=109.98 Aligned_cols=112 Identities=21% Similarity=0.121 Sum_probs=86.3
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~~~ 154 (732)
++||.+|||+|||+|..|..|++.+.. +...|+|+|+++.++..++++++..+.. ++.+.++|+..+|.
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~-------~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--- 137 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHH-------DNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--- 137 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCS-------SSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC---
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCC-------CCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc---
Confidence 689999999999999999999887543 3458999999999999999999887754 78899998877542
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
..||.|++- .++..-+ ......+|++..+.|||||+++.+
T Consensus 138 --------------------~~~d~v~~~------~~l~~~~--------------~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 138 --------------------ENASMVVLN------FTLQFLE--------------PSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp --------------------CSEEEEEEE------SCGGGSC--------------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------------------cccccceee------eeeeecC--------------chhHhHHHHHHHHHcCCCcEEEEE
Confidence 458999872 1221111 012246899999999999999987
Q ss_pred cCC
Q 004759 235 TCS 237 (732)
Q Consensus 235 TCS 237 (732)
.-.
T Consensus 178 e~~ 180 (261)
T 4gek_A 178 EKF 180 (261)
T ss_dssp EEB
T ss_pred ecc
Confidence 543
No 87
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.95 E-value=1.5e-08 Score=103.94 Aligned_cols=126 Identities=16% Similarity=0.094 Sum_probs=99.4
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~Vt~~Da~~fp~~~~ 154 (732)
+.+|++|||+|||+|..++.++..- +.+.|+|+|+++..+..+++|++++|..+ +.+..+|+.....
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~---------~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~--- 86 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMG---------YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE--- 86 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTT---------CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC---
T ss_pred CCCCCEEEEECCchHHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc---
Confidence 5689999999999999999987751 35799999999999999999999999864 8999888765221
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
....||.|++ .|.| ..+-.+||..+...|+++|++|.|
T Consensus 87 ------------------~~~~~D~Ivi----aGmG--------------------g~lI~~IL~~~~~~l~~~~~lIlq 124 (230)
T 3lec_A 87 ------------------EADNIDTITI----CGMG--------------------GRLIADILNNDIDKLQHVKTLVLQ 124 (230)
T ss_dssp ------------------GGGCCCEEEE----EEEC--------------------HHHHHHHHHHTGGGGTTCCEEEEE
T ss_pred ------------------cccccCEEEE----eCCc--------------------hHHHHHHHHHHHHHhCcCCEEEEE
Confidence 1136999875 2333 134567999999999999999987
Q ss_pred cCCCCCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 235 TCSMNPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 235 TCSlnp~ENEaVV~~~L~~~~~~velvd 262 (732)
.- .++..|..+|.++| +++++
T Consensus 125 p~-----~~~~~lr~~L~~~G--f~i~~ 145 (230)
T 3lec_A 125 PN-----NREDDLRKWLAAND--FEIVA 145 (230)
T ss_dssp ES-----SCHHHHHHHHHHTT--EEEEE
T ss_pred CC-----CChHHHHHHHHHCC--CEEEE
Confidence 62 46888899999876 55544
No 88
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.95 E-value=2.3e-09 Score=107.04 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=84.1
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
.+.++++|||++||+|..+..++..++ +.+.|+++|+++.++..+.+++++. .++.+...|+.....+
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~-- 137 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVG--------WEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEY-- 137 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGG--
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhC--------CCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchh--
Confidence 478999999999999999999998864 2479999999999999999888765 6788888887652210
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
......||.|++|+| .++ ....++..+.++|||||+++++
T Consensus 138 ----------------~~~~~~~D~v~~~~~---------~~~---------------~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 138 ----------------RALVPKVDVIFEDVA---------QPT---------------QAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ----------------TTTCCCEEEEEECCC---------STT---------------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----------------hcccCCceEEEECCC---------CHh---------------HHHHHHHHHHHhcCCCCEEEEE
Confidence 001147999999876 111 1123488899999999999987
Q ss_pred c
Q 004759 235 T 235 (732)
Q Consensus 235 T 235 (732)
.
T Consensus 178 ~ 178 (227)
T 1g8a_A 178 V 178 (227)
T ss_dssp E
T ss_pred E
Confidence 3
No 89
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.95 E-value=6.2e-09 Score=105.15 Aligned_cols=112 Identities=13% Similarity=0.089 Sum_probs=87.9
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPG 151 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~ 151 (732)
.+.+.++.+|||++||+|..+..++..+ ...|+++|+++..+..++++++..+.. ++.+...|+..++.
T Consensus 31 ~~~~~~~~~VLDiGcG~G~~~~~la~~~----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 100 (256)
T 1nkv_A 31 VLRMKPGTRILDLGSGSGEMLCTWARDH----------GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA 100 (256)
T ss_dssp HTCCCTTCEEEEETCTTCHHHHHHHHHT----------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC
T ss_pred hcCCCCCCEEEEECCCCCHHHHHHHHhc----------CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc
Confidence 3567899999999999999999998874 258999999999999999999988874 78898888876431
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
...||.|++- +.+...++ ..++|..+.++|||||+|
T Consensus 101 ----------------------~~~fD~V~~~------~~~~~~~~----------------~~~~l~~~~r~LkpgG~l 136 (256)
T 1nkv_A 101 ----------------------NEKCDVAACV------GATWIAGG----------------FAGAEELLAQSLKPGGIM 136 (256)
T ss_dssp ----------------------SSCEEEEEEE------SCGGGTSS----------------SHHHHHHHTTSEEEEEEE
T ss_pred ----------------------CCCCCEEEEC------CChHhcCC----------------HHHHHHHHHHHcCCCeEE
Confidence 2679999972 22211111 256789999999999999
Q ss_pred EEEcCCC
Q 004759 232 VYSTCSM 238 (732)
Q Consensus 232 VYSTCSl 238 (732)
+.++...
T Consensus 137 ~~~~~~~ 143 (256)
T 1nkv_A 137 LIGEPYW 143 (256)
T ss_dssp EEEEEEE
T ss_pred EEecCcc
Confidence 9986543
No 90
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.94 E-value=1.9e-09 Score=103.20 Aligned_cols=111 Identities=15% Similarity=0.052 Sum_probs=83.5
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~~~ 154 (732)
..++.+|||+|||+|..+..++.. +.+.|+++|+++..+..++.+++..+.. ++.+...|+..+..
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--- 95 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR----------GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID--- 95 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT----------TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH---
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc----------CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH---
Confidence 567889999999999999988764 2469999999999999999999988874 68888888765311
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHH--HhhccCCCEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRG--ISLLKVGGRIV 232 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rA--l~lLKpGGrLV 232 (732)
.....||.|++|+|+.. + ....++... .++|+|||+++
T Consensus 96 -----------------~~~~~fD~i~~~~~~~~-~----------------------~~~~~~~~l~~~~~L~~gG~l~ 135 (177)
T 2esr_A 96 -----------------CLTGRFDLVFLDPPYAK-E----------------------TIVATIEALAAKNLLSEQVMVV 135 (177)
T ss_dssp -----------------HBCSCEEEEEECCSSHH-H----------------------HHHHHHHHHHHTTCEEEEEEEE
T ss_pred -----------------hhcCCCCEEEECCCCCc-c----------------------hHHHHHHHHHhCCCcCCCcEEE
Confidence 01145999999988421 0 011223333 48999999999
Q ss_pred EEcCCCC
Q 004759 233 YSTCSMN 239 (732)
Q Consensus 233 YSTCSln 239 (732)
.++++-.
T Consensus 136 ~~~~~~~ 142 (177)
T 2esr_A 136 CETDKTV 142 (177)
T ss_dssp EEEETTC
T ss_pred EEECCcc
Confidence 9887763
No 91
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.94 E-value=6e-10 Score=113.59 Aligned_cols=138 Identities=12% Similarity=0.128 Sum_probs=97.7
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
++...++.+|||+|||+|..|..|++.+..- .+.+.|+|+|+++.++..++ .+ ..++.+..+|+..+..+
T Consensus 76 ~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~-----~~~~~V~gvD~s~~~l~~a~----~~-~~~v~~~~gD~~~~~~l 145 (236)
T 2bm8_A 76 MLWELRPRTIVELGVYNGGSLAWFRDLTKIM-----GIDCQVIGIDRDLSRCQIPA----SD-MENITLHQGDCSDLTTF 145 (236)
T ss_dssp HHHHHCCSEEEEECCTTSHHHHHHHHHHHHT-----TCCCEEEEEESCCTTCCCCG----GG-CTTEEEEECCSSCSGGG
T ss_pred HHHhcCCCEEEEEeCCCCHHHHHHHHhhhhc-----CCCCEEEEEeCChHHHHHHh----cc-CCceEEEECcchhHHHH
Confidence 3444567899999999999999999874210 13689999999999877654 22 26788999988764111
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHh-hccCCCEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGIS-LLKVGGRI 231 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~-lLKpGGrL 231 (732)
. ......||.|++|..- . ...++|..+.+ +|||||+|
T Consensus 146 ~-----------------~~~~~~fD~I~~d~~~---------~----------------~~~~~l~~~~r~~LkpGG~l 183 (236)
T 2bm8_A 146 E-----------------HLREMAHPLIFIDNAH---------A----------------NTFNIMKWAVDHLLEEGDYF 183 (236)
T ss_dssp G-----------------GGSSSCSSEEEEESSC---------S----------------SHHHHHHHHHHHTCCTTCEE
T ss_pred H-----------------hhccCCCCEEEECCch---------H----------------hHHHHHHHHHHhhCCCCCEE
Confidence 0 0011369999997640 0 11357888886 99999999
Q ss_pred EEEc-CCCCCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 232 VYST-CSMNPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 232 VYST-CSlnp~ENEaVV~~~L~~~~~~velvd 262 (732)
|++. |.+.+..+...+..+++.++..+++..
T Consensus 184 v~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~~ 215 (236)
T 2bm8_A 184 IIEDMIPYWYRYAPQLFSEYLGAFRDVLSMDM 215 (236)
T ss_dssp EECSCHHHHHHHCHHHHHHHHHTTTTTEEEET
T ss_pred EEEeCcccccccCHHHHHHHHHhCcccEEEcc
Confidence 9974 344456677789999998876677754
No 92
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.94 E-value=1.1e-09 Score=112.29 Aligned_cols=147 Identities=14% Similarity=0.182 Sum_probs=102.3
Q ss_pred hhhHHHHHHHhhcccccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCC
Q 004759 41 NQTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLD 120 (732)
Q Consensus 41 ~~~l~~~~~~l~~~~~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid 120 (732)
.+.+..+.++-.. ...+....+.....+...++...++.+|||+|||+|..|..++..+.. .+.|+++|++
T Consensus 43 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~--------~~~v~~iD~s 113 (247)
T 1sui_A 43 HEAMKELREVTAK-HPWNIMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPE--------DGKILAMDIN 113 (247)
T ss_dssp TTHHHHHHHHHHT-STTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCT--------TCEEEEEESC
T ss_pred CHHHHHHHHHHHh-cCCCCCCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCC--------CCEEEEEECC
Confidence 3445556555321 122334344444444445556677889999999999999999998632 5899999999
Q ss_pred HHHHHHHHHHHHHcCC-CceEEEecccccC-CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhh
Q 004759 121 VQRCNLLIHQTKRMCT-ANLIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDI 198 (732)
Q Consensus 121 ~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~f-p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~ 198 (732)
+.++..+++++++.|. .++.+..+|+..+ +.+. ........||.|++|+++.
T Consensus 114 ~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~---------------~~~~~~~~fD~V~~d~~~~----------- 167 (247)
T 1sui_A 114 KENYELGLPVIKKAGVDHKIDFREGPALPVLDEMI---------------KDEKNHGSYDFIFVDADKD----------- 167 (247)
T ss_dssp CHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH---------------HSGGGTTCBSEEEECSCST-----------
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHH---------------hccCCCCCEEEEEEcCchH-----------
Confidence 9999999999999987 4688888888653 1110 0000126799999986521
Q ss_pred hhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 199 WRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 199 w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
....++..++++|||||+||+..+
T Consensus 168 --------------~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 168 --------------NYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp --------------THHHHHHHHHHHBCTTCCEEEECT
T ss_pred --------------HHHHHHHHHHHhCCCCeEEEEecC
Confidence 123578888999999999998653
No 93
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.94 E-value=3.6e-09 Score=115.11 Aligned_cols=128 Identities=13% Similarity=0.065 Sum_probs=99.5
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~~~ 154 (732)
+.++.+|||+|||+|..+..++.+. +.+.|+|+|+|+..+..++.|+++.|. .++.+...|+..++.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~---------~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~--- 282 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRR---------YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQ--- 282 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTT---------CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGG---
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhC---------CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCc---
Confidence 6889999999999999999988752 235899999999999999999999998 578999999887542
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
....||.|++|+|..- .......+..++.+++..+.++| ||+++|.
T Consensus 283 ------------------~~~~fD~Ii~npPyg~--------------r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i 328 (373)
T 3tm4_A 283 ------------------YVDSVDFAISNLPYGL--------------KIGKKSMIPDLYMKFFNELAKVL--EKRGVFI 328 (373)
T ss_dssp ------------------TCSCEEEEEEECCCC--------------------CCHHHHHHHHHHHHHHHE--EEEEEEE
T ss_pred ------------------ccCCcCEEEECCCCCc--------------ccCcchhHHHHHHHHHHHHHHHc--CCeEEEE
Confidence 1257999999999532 01122345677888999999988 7899999
Q ss_pred cCCCCCcCcHHHHHHHHHHCC
Q 004759 235 TCSMNPVENEAVVAEILRKCE 255 (732)
Q Consensus 235 TCSlnp~ENEaVV~~~L~~~~ 255 (732)
||+ ...+...+.+.+
T Consensus 329 ~~~------~~~~~~~~~~~G 343 (373)
T 3tm4_A 329 TTE------KKAIEEAIAENG 343 (373)
T ss_dssp ESC------HHHHHHHHHHTT
T ss_pred ECC------HHHHHHHHHHcC
Confidence 883 455566776654
No 94
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.93 E-value=2.9e-09 Score=103.29 Aligned_cols=140 Identities=19% Similarity=0.167 Sum_probs=85.9
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEE-ecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVT-NHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt-~~Da~~fp~~~~ 154 (732)
++++.+|||+|||||..+..++..++........+.+.|+|+|+++.+ ...++.+. ..|....+...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~- 87 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQ- 87 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHH-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHH-
Confidence 578999999999999999999988642100011123899999999842 23456666 66544321000
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
..........||.|++|.++...|... .+ ......++..++..+.++|||||++|.+
T Consensus 88 ------------~~~~~~~~~~fD~V~~~~~~~~~~~~~--~~---------~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (196)
T 2nyu_A 88 ------------RILEVLPGRRADVILSDMAPNATGFRD--LD---------HDRLISLCLTLLSVTPDILQPGGTFLCK 144 (196)
T ss_dssp ------------HHHHHSGGGCEEEEEECCCCCCCSCHH--HH---------HHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------------HHHHhcCCCCCcEEEeCCCCCCCCCcc--cC---------HHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 000001125799999998655444310 11 0122345578999999999999999998
Q ss_pred cCCCCCcCcHHHHHHHHHH
Q 004759 235 TCSMNPVENEAVVAEILRK 253 (732)
Q Consensus 235 TCSlnp~ENEaVV~~~L~~ 253 (732)
++.- ++...+...++.
T Consensus 145 ~~~~---~~~~~~~~~l~~ 160 (196)
T 2nyu_A 145 TWAG---SQSRRLQRRLTE 160 (196)
T ss_dssp ECCS---GGGHHHHHHHHH
T ss_pred ecCC---ccHHHHHHHHHH
Confidence 7644 333344455554
No 95
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.93 E-value=2.8e-09 Score=106.26 Aligned_cols=112 Identities=16% Similarity=0.164 Sum_probs=84.9
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC-----CCceEEEecccccC
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC-----TANLIVTNHEAQHF 149 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg-----~~ni~Vt~~Da~~f 149 (732)
.++++++|||+|||+|..+..++..++.. ..+.+.|+++|+++.++..+++++++.+ ..++.+...|+...
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~----~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 152 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVL----ENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQV 152 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTT----TCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGC
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhccc----CCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhc
Confidence 57899999999999999999999875310 0135799999999999999999999887 57888888887652
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
+.- .......||+|+++.++.. ++..+.++|||||
T Consensus 153 ~~~-----------------~~~~~~~fD~I~~~~~~~~----------------------------~~~~~~~~LkpgG 187 (227)
T 2pbf_A 153 NEE-----------------EKKELGLFDAIHVGASASE----------------------------LPEILVDLLAENG 187 (227)
T ss_dssp CHH-----------------HHHHHCCEEEEEECSBBSS----------------------------CCHHHHHHEEEEE
T ss_pred ccc-----------------cCccCCCcCEEEECCchHH----------------------------HHHHHHHhcCCCc
Confidence 100 0011257999999876431 2355678999999
Q ss_pred EEEEEc
Q 004759 230 RIVYST 235 (732)
Q Consensus 230 rLVYST 235 (732)
+||.++
T Consensus 188 ~lv~~~ 193 (227)
T 2pbf_A 188 KLIIPI 193 (227)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
No 96
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.93 E-value=5.6e-09 Score=103.38 Aligned_cols=144 Identities=10% Similarity=-0.003 Sum_probs=100.2
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-----ceEEEecccccC
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-----NLIVTNHEAQHF 149 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-----ni~Vt~~Da~~f 149 (732)
...++.+|||+|||+|..+..+++.. +...|+++|+++..+..+++++...+.+ ++.+...|+...
T Consensus 26 ~~~~~~~vLDiGcG~G~~~~~l~~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 26 KQSNARRVIDLGCGQGNLLKILLKDS---------FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHTTCCEEEEETCTTCHHHHHHHHCT---------TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HhcCCCEEEEeCCCCCHHHHHHHhhC---------CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 44678899999999999999987742 2469999999999999999998777765 688888886442
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
+ .....||.|++.- ++..-+ .....++|..+.++|||||
T Consensus 97 ~---------------------~~~~~fD~v~~~~------~l~~~~--------------~~~~~~~l~~~~~~LkpgG 135 (217)
T 3jwh_A 97 D---------------------KRFHGYDAATVIE------VIEHLD--------------LSRLGAFERVLFEFAQPKI 135 (217)
T ss_dssp C---------------------GGGCSCSEEEEES------CGGGCC--------------HHHHHHHHHHHHTTTCCSE
T ss_pred c---------------------ccCCCcCEEeeHH------HHHcCC--------------HHHHHHHHHHHHHHcCCCE
Confidence 2 1126799999732 121111 1123578999999999999
Q ss_pred EEEEEcCCC----------------------CCcCcHHHHHHHHHHCCCcEEEEecCccCC
Q 004759 230 RIVYSTCSM----------------------NPVENEAVVAEILRKCEGSVELVDVSNEVP 268 (732)
Q Consensus 230 rLVYSTCSl----------------------np~ENEaVV~~~L~~~~~~velvd~s~~lP 268 (732)
.++.+.+.- ++.|=..-+..+++++|-.+++..+...-|
T Consensus 136 ~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~~~g~~~~ 196 (217)
T 3jwh_A 136 VIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQPIGEADP 196 (217)
T ss_dssp EEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEEECCCSCCCS
T ss_pred EEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEEEEecCCccC
Confidence 888776641 222222333477888876666666555444
No 97
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.93 E-value=5.3e-09 Score=106.98 Aligned_cols=114 Identities=15% Similarity=0.123 Sum_probs=90.1
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCCCc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCR 153 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~~ 153 (732)
.+.++.+|||+|||+|..+..++.. +.+.|+++|+++..+..++.+++..+.. ++.+...|+..+|.
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 110 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGH----------VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF-- 110 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTT----------CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC--
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhc----------cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC--
Confidence 4688999999999999999998775 2469999999999999999999999875 59999998876541
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
....||.|++... +.. + -...+|..+.++|||||+++.
T Consensus 111 -------------------~~~~fD~i~~~~~------~~~-------~----------~~~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 111 -------------------RNEELDLIWSEGA------IYN-------I----------GFERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp -------------------CTTCEEEEEESSC------GGG-------T----------CHHHHHHHHGGGEEEEEEEEE
T ss_pred -------------------CCCCEEEEEEcCC------cee-------c----------CHHHHHHHHHHHcCCCCEEEE
Confidence 1267999998432 110 0 024578999999999999999
Q ss_pred EcCCCCCcC
Q 004759 234 STCSMNPVE 242 (732)
Q Consensus 234 STCSlnp~E 242 (732)
+++++....
T Consensus 149 ~~~~~~~~~ 157 (267)
T 3kkz_A 149 SECSWFTDE 157 (267)
T ss_dssp EEEEESSSC
T ss_pred EEeeecCCC
Confidence 988754443
No 98
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.92 E-value=3.2e-09 Score=108.08 Aligned_cols=126 Identities=16% Similarity=0.059 Sum_probs=87.7
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc---CCCc---------------
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM---CTAN--------------- 138 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl---g~~n--------------- 138 (732)
.++.+|||+|||+|..+..++..+.. +...|+|+|+|+..+..++.++.+. +..+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~-------~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRR-------SLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKP 122 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGG-------GEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhcc-------CCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccc
Confidence 46789999999999999999887421 2478999999999999999888765 4322
Q ss_pred -----------eE-------------EEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCcccc
Q 004759 139 -----------LI-------------VTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRK 194 (732)
Q Consensus 139 -----------i~-------------Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk 194 (732)
+. +..+|+....... .......||.|+|++|+.....+.+
T Consensus 123 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~----------------~~~~~~~fD~Iv~npp~~~~~~~~~ 186 (250)
T 1o9g_A 123 SYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALS----------------AVLAGSAPDVVLTDLPYGERTHWEG 186 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHH----------------HHHTTCCCSEEEEECCGGGSSSSSS
T ss_pred cchhhhhhhhhhhhhccccccccccceeecccccccccc----------------cccCCCCceEEEeCCCeeccccccc
Confidence 34 6666654311000 0001247999999999654332111
Q ss_pred ChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCC
Q 004759 195 APDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 238 (732)
Q Consensus 195 ~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSl 238 (732)
......+..++.++.++|||||+|+++.++.
T Consensus 187 -------------~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 217 (250)
T 1o9g_A 187 -------------QVPGQPVAGLLRSLASALPAHAVIAVTDRSR 217 (250)
T ss_dssp -------------CCCHHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred -------------cccccHHHHHHHHHHHhcCCCcEEEEeCcch
Confidence 1223566789999999999999999976664
No 99
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.91 E-value=1.1e-08 Score=102.83 Aligned_cols=109 Identities=17% Similarity=0.156 Sum_probs=87.1
Q ss_pred hhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccC
Q 004759 71 PLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHF 149 (732)
Q Consensus 71 ~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~f 149 (732)
...+++.++++|||+|||+|..+..++.. .+.|+++|+++.++..++++++..+. .++.+...|+...
T Consensus 84 ~~~~~~~~~~~vldiG~G~G~~~~~l~~~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 152 (248)
T 2yvl_A 84 ALKLNLNKEKRVLEFGTGSGALLAVLSEV-----------AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDA 152 (248)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHH-----------SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTS
T ss_pred HHhcCCCCCCEEEEeCCCccHHHHHHHHh-----------CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhc
Confidence 34567889999999999999999999886 26899999999999999999998887 6788888776552
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
. .....||.|++|+| +| ..++..+.++|+|||
T Consensus 153 ~---------------------~~~~~~D~v~~~~~---------~~------------------~~~l~~~~~~L~~gG 184 (248)
T 2yvl_A 153 E---------------------VPEGIFHAAFVDVR---------EP------------------WHYLEKVHKSLMEGA 184 (248)
T ss_dssp C---------------------CCTTCBSEEEECSS---------CG------------------GGGHHHHHHHBCTTC
T ss_pred c---------------------cCCCcccEEEECCc---------CH------------------HHHHHHHHHHcCCCC
Confidence 1 01257999999876 11 134677889999999
Q ss_pred EEEEEcCCC
Q 004759 230 RIVYSTCSM 238 (732)
Q Consensus 230 rLVYSTCSl 238 (732)
+++.++.+.
T Consensus 185 ~l~~~~~~~ 193 (248)
T 2yvl_A 185 PVGFLLPTA 193 (248)
T ss_dssp EEEEEESSH
T ss_pred EEEEEeCCH
Confidence 999887554
No 100
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.91 E-value=2.6e-09 Score=118.78 Aligned_cols=168 Identities=13% Similarity=0.092 Sum_probs=112.7
Q ss_pred ccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCC----CCCCeEEEEEeCCHHHHHHHHHHH
Q 004759 56 EIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPG----ALPNGMVIANDLDVQRCNLLIHQT 131 (732)
Q Consensus 56 ~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~----~~p~G~VvAnDid~~Rl~~L~~n~ 131 (732)
..|.++--...+.+.+.++++.++.+|||.|||+|+.+..+++.+....... ..+...|+|+|+++..+.+++.|+
T Consensus 149 ~~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl 228 (445)
T 2okc_A 149 GAGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNL 228 (445)
T ss_dssp CCGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred cCCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHH
Confidence 3566554444455555677889999999999999999999998874210000 001256999999999999999998
Q ss_pred HHcCCC--ceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccC---hhhhhhccccc
Q 004759 132 KRMCTA--NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKA---PDIWRKWNVGL 206 (732)
Q Consensus 132 kRlg~~--ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~---pd~w~~ws~~~ 206 (732)
...|.. ++.+.++|+...+. ...||.|+++||.++....... .+.+ + +
T Consensus 229 ~l~g~~~~~~~i~~gD~l~~~~----------------------~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~--~-~-- 281 (445)
T 2okc_A 229 YLHGIGTDRSPIVCEDSLEKEP----------------------STLVDVILANPPFGTRPAGSVDINRPDFY--V-E-- 281 (445)
T ss_dssp HHTTCCSSCCSEEECCTTTSCC----------------------SSCEEEEEECCCSSCCCTTCCCCCCTTSS--S-C--
T ss_pred HHhCCCcCCCCEeeCCCCCCcc----------------------cCCcCEEEECCCCCCcccccchhhHhhcC--C-C--
Confidence 887764 56677777654221 1379999999999986543221 1111 1 1
Q ss_pred ccchHHHHHHHHHHHHhhccCCCEEEEEcCC--CCCcCcHHHHHH-HHHH
Q 004759 207 GNGLHSLQVQIAMRGISLLKVGGRIVYSTCS--MNPVENEAVVAE-ILRK 253 (732)
Q Consensus 207 ~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS--lnp~ENEaVV~~-~L~~ 253 (732)
-...+...+.+++++||+||++++.++. +.....+..+.. +++.
T Consensus 282 ---~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~ 328 (445)
T 2okc_A 282 ---TKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRLLQD 328 (445)
T ss_dssp ---CSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHHHH
T ss_pred ---CcchHHHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHHHHhc
Confidence 1224678899999999999999998764 322233444444 4554
No 101
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.91 E-value=2.8e-09 Score=102.18 Aligned_cols=117 Identities=16% Similarity=0.108 Sum_probs=84.2
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~~~ 154 (732)
..++.+|||+|||+|..+..++.. +...|+++|+++..+..++++++..+. .++.+...|+..+...
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-- 109 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSR----------GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQ-- 109 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHH--
T ss_pred hcCCCCEEEeCCccCHHHHHHHHc----------CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHH--
Confidence 357889999999999999987762 246899999999999999999999886 4788888887653110
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
.......||.|++|+|.. .+. .... .+.+ .+.++|+|||+++++
T Consensus 110 ---------------~~~~~~~fD~i~~~~~~~-~~~------------------~~~~-~~~l-~~~~~L~~gG~l~~~ 153 (187)
T 2fhp_A 110 ---------------FYEEKLQFDLVLLDPPYA-KQE------------------IVSQ-LEKM-LERQLLTNEAVIVCE 153 (187)
T ss_dssp ---------------HHHTTCCEEEEEECCCGG-GCC------------------HHHH-HHHH-HHTTCEEEEEEEEEE
T ss_pred ---------------HHhcCCCCCEEEECCCCC-chh------------------HHHH-HHHH-HHhcccCCCCEEEEE
Confidence 001136799999998832 110 0011 1112 248899999999999
Q ss_pred cCCCCC
Q 004759 235 TCSMNP 240 (732)
Q Consensus 235 TCSlnp 240 (732)
+|+-..
T Consensus 154 ~~~~~~ 159 (187)
T 2fhp_A 154 TDKTVK 159 (187)
T ss_dssp EETTCC
T ss_pred eCCccc
Confidence 888643
No 102
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.90 E-value=7.1e-09 Score=113.16 Aligned_cols=125 Identities=14% Similarity=0.120 Sum_probs=92.5
Q ss_pred chhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC---ceEEEecc
Q 004759 69 VPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA---NLIVTNHE 145 (732)
Q Consensus 69 lp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~---ni~Vt~~D 145 (732)
+....+...++.+|||+|||+|..+..++... |...|+++|+++.++..++++++.++.. ++.+...|
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~---------p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D 283 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN---------PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN 283 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECS
T ss_pred HHHHhCcccCCCeEEEEeCcchHHHHHHHHHC---------CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEech
Confidence 33445666778999999999999999998863 3579999999999999999999998865 46677777
Q ss_pred cccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhc
Q 004759 146 AQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLL 225 (732)
Q Consensus 146 a~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lL 225 (732)
+... .....||.|++|+|......+. . ....+++..+.++|
T Consensus 284 ~~~~----------------------~~~~~fD~Ii~nppfh~~~~~~-----------~------~~~~~~l~~~~~~L 324 (375)
T 4dcm_A 284 ALSG----------------------VEPFRFNAVLCNPPFHQQHALT-----------D------NVAWEMFHHARRCL 324 (375)
T ss_dssp TTTT----------------------CCTTCEEEEEECCCC------------------C------CHHHHHHHHHHHHE
T ss_pred hhcc----------------------CCCCCeeEEEECCCcccCcccC-----------H------HHHHHHHHHHHHhC
Confidence 6541 1126799999999954311110 0 12236899999999
Q ss_pred cCCCEEEEEcCCCCCc
Q 004759 226 KVGGRIVYSTCSMNPV 241 (732)
Q Consensus 226 KpGGrLVYSTCSlnp~ 241 (732)
||||+++.++-+..+.
T Consensus 325 kpgG~l~iv~n~~~~~ 340 (375)
T 4dcm_A 325 KINGELYIVANRHLDY 340 (375)
T ss_dssp EEEEEEEEEEETTSCH
T ss_pred CCCcEEEEEEECCcCH
Confidence 9999999986665443
No 103
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.90 E-value=3.3e-09 Score=99.46 Aligned_cols=132 Identities=20% Similarity=0.122 Sum_probs=90.5
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
++++.+|||+|||+|..+..++..++ +.+.|+++|+++ .+. ..++.+...|+..++....
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~--------~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~~~- 79 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIG--------GKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVMKA- 79 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHC--------TTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHHHH-
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhC--------CCCeEEEEECcc-ccc----------cCcEEEEEcccccchhhhh-
Confidence 57899999999999999999998763 247999999998 542 2567777777665321000
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
.+.......||.|++|.|+...+... .+ ....+.++..++..+.++|+|||+++.++
T Consensus 80 ------------~~~~~~~~~~D~i~~~~~~~~~~~~~--~~---------~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 80 ------------LLERVGDSKVQVVMSDMAPNMSGTPA--VD---------IPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp ------------HHHHHTTCCEEEEEECCCCCCCSCHH--HH---------HHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------hhccCCCCceeEEEECCCccccCCCc--cc---------hHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 00001235799999999987766410 00 11234456889999999999999999876
Q ss_pred CCCCCcCcHHHHHHHHHH
Q 004759 236 CSMNPVENEAVVAEILRK 253 (732)
Q Consensus 236 CSlnp~ENEaVV~~~L~~ 253 (732)
... ++...+...++.
T Consensus 137 ~~~---~~~~~~~~~~~~ 151 (180)
T 1ej0_A 137 FQG---EGFDEYLREIRS 151 (180)
T ss_dssp ESS---TTHHHHHHHHHH
T ss_pred ecC---CcHHHHHHHHHH
Confidence 543 555556666665
No 104
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.90 E-value=1.1e-08 Score=113.50 Aligned_cols=88 Identities=22% Similarity=0.180 Sum_probs=72.2
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
+++.++.+|||+|||+|..+..|+.. .+.|+|+|+++..+..+++|+++++..++.+...|+..+..-
T Consensus 282 l~~~~~~~VLDlgcG~G~~~~~la~~-----------~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~- 349 (433)
T 1uwv_A 282 LDVQPEDRVLDLFCGMGNFTLPLATQ-----------AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTK- 349 (433)
T ss_dssp HTCCTTCEEEEESCTTTTTHHHHHTT-----------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSS-
T ss_pred hcCCCCCEEEECCCCCCHHHHHHHhh-----------CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhh-
Confidence 46678999999999999999998765 368999999999999999999999988999999998763210
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCC
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 189 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGd 189 (732)
.......||.|++|||++|.
T Consensus 350 ----------------~~~~~~~fD~Vv~dPPr~g~ 369 (433)
T 1uwv_A 350 ----------------QPWAKNGFDKVLLDPARAGA 369 (433)
T ss_dssp ----------------SGGGTTCCSEEEECCCTTCC
T ss_pred ----------------hhhhcCCCCEEEECCCCccH
Confidence 00112579999999997763
No 105
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.89 E-value=2.1e-09 Score=117.24 Aligned_cols=165 Identities=15% Similarity=0.097 Sum_probs=105.2
Q ss_pred CcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 58 GNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 58 G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
|.++-.+......+.+++..++.+|||+|||+|+.+..+++.+.. ...|+|+|+++..+..+ .
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~--------~~~i~gvDi~~~~~~~a---------~ 81 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGT--------AYRFVGVEIDPKALDLP---------P 81 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCS--------CSEEEEEESCTTTCCCC---------T
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCC--------CCeEEEEECCHHHHHhC---------C
Confidence 444443333333334455556779999999999999999887531 46899999999988655 4
Q ss_pred ceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCcccc-----Chhhhhhccc--ccccch
Q 004759 138 NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRK-----APDIWRKWNV--GLGNGL 210 (732)
Q Consensus 138 ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk-----~pd~w~~ws~--~~~~~L 210 (732)
++.+.+.|...++. ...||.|+++||+...+...+ ..+....+.. ....+.
T Consensus 82 ~~~~~~~D~~~~~~----------------------~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (421)
T 2ih2_A 82 WAEGILADFLLWEP----------------------GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGK 139 (421)
T ss_dssp TEEEEESCGGGCCC----------------------SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTT
T ss_pred CCcEEeCChhhcCc----------------------cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCC
Confidence 67788888765321 257999999999988765221 1222111110 111122
Q ss_pred HHHHHHHHHHHHhhccCCCEEEEEcCC--CCCcCcHHHHHHHHHHCCCcEEEEec
Q 004759 211 HSLQVQIAMRGISLLKVGGRIVYSTCS--MNPVENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 211 ~~lQ~~IL~rAl~lLKpGGrLVYSTCS--lnp~ENEaVV~~~L~~~~~~velvd~ 263 (732)
..++..++.+++++|++||++++.+++ ++....+.+ .+.|.+.+. ..++.+
T Consensus 140 ~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~l-r~~l~~~~~-~~i~~l 192 (421)
T 2ih2_A 140 YNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALL-REFLAREGK-TSVYYL 192 (421)
T ss_dssp CCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHH-HHHHHHHSE-EEEEEE
T ss_pred ccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHH-HHHHHhcCC-eEEEEC
Confidence 456778999999999999999998876 333334454 444444332 455543
No 106
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.89 E-value=2.5e-08 Score=103.00 Aligned_cols=126 Identities=10% Similarity=0.043 Sum_probs=98.7
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~Vt~~Da~~fp~~~~ 154 (732)
+.+|++|||+|||+|..++.++..- +.+.|+|+|+++..+..+++|++++|+.+ +.+..+|+.....
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~---------~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~--- 86 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQ---------TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE--- 86 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTT---------SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC---
T ss_pred CCCCCEEEEECCccHHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC---
Confidence 5789999999999999999987751 35799999999999999999999999865 8888888765211
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
....||.|++ .|.| ..+-.+||..+...|+++|++|.+
T Consensus 87 ------------------~~~~~D~Ivi----agmG--------------------g~lI~~IL~~~~~~L~~~~~lIlq 124 (244)
T 3gnl_A 87 ------------------KKDAIDTIVI----AGMG--------------------GTLIRTILEEGAAKLAGVTKLILQ 124 (244)
T ss_dssp ------------------GGGCCCEEEE----EEEC--------------------HHHHHHHHHHTGGGGTTCCEEEEE
T ss_pred ------------------ccccccEEEE----eCCc--------------------hHHHHHHHHHHHHHhCCCCEEEEE
Confidence 1135999886 2333 134567999999999999999987
Q ss_pred cCCCCCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 235 TCSMNPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 235 TCSlnp~ENEaVV~~~L~~~~~~velvd 262 (732)
. ......|...|.+.| +.+++
T Consensus 125 ~-----~~~~~~lr~~L~~~G--f~i~~ 145 (244)
T 3gnl_A 125 P-----NIAAWQLREWSEQNN--WLITS 145 (244)
T ss_dssp E-----SSCHHHHHHHHHHHT--EEEEE
T ss_pred c-----CCChHHHHHHHHHCC--CEEEE
Confidence 5 247888888898876 44443
No 107
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.88 E-value=1.2e-08 Score=103.17 Aligned_cols=113 Identities=12% Similarity=0.092 Sum_probs=85.8
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
.+++.++.+|||+|||+|..+..++... ...|+++|+++..+..++.++... .++.+...|+..+|.
T Consensus 50 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~- 116 (266)
T 3ujc_A 50 DIELNENSKVLDIGSGLGGGCMYINEKY----------GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEF- 116 (266)
T ss_dssp TCCCCTTCEEEEETCTTSHHHHHHHHHH----------CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCC-
T ss_pred hcCCCCCCEEEEECCCCCHHHHHHHHHc----------CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCC-
Confidence 3567899999999999999999998875 258999999999999887765443 678888888876532
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
....||.|++.. ++.+-+ ......+|..+.++|||||+++
T Consensus 117 --------------------~~~~fD~v~~~~------~l~~~~--------------~~~~~~~l~~~~~~L~pgG~l~ 156 (266)
T 3ujc_A 117 --------------------PENNFDLIYSRD------AILALS--------------LENKNKLFQKCYKWLKPTGTLL 156 (266)
T ss_dssp --------------------CTTCEEEEEEES------CGGGSC--------------HHHHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------CCCcEEEEeHHH------HHHhcC--------------hHHHHHHHHHHHHHcCCCCEEE
Confidence 126799999732 121110 1334678999999999999999
Q ss_pred EEcCCC
Q 004759 233 YSTCSM 238 (732)
Q Consensus 233 YSTCSl 238 (732)
.++.+.
T Consensus 157 ~~~~~~ 162 (266)
T 3ujc_A 157 ITDYCA 162 (266)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 987543
No 108
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.88 E-value=3.7e-09 Score=105.90 Aligned_cols=110 Identities=12% Similarity=0.171 Sum_probs=84.1
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC-----CCceEEEecccccC
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC-----TANLIVTNHEAQHF 149 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg-----~~ni~Vt~~Da~~f 149 (732)
.++++++|||+|||+|..+..+++.++.. +..+.+.|+++|+++..+..+++++.+.+ ..++.+...|+...
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~---~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 157 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAK---GVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG 157 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHS---CCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccc---cCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC
Confidence 57899999999999999999999976520 00123699999999999999999998876 57888888887651
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
. .....||+|+++.++.. ++..+.++|||||
T Consensus 158 ~---------------------~~~~~fD~I~~~~~~~~----------------------------~~~~~~~~LkpgG 188 (227)
T 1r18_A 158 Y---------------------PPNAPYNAIHVGAAAPD----------------------------TPTELINQLASGG 188 (227)
T ss_dssp C---------------------GGGCSEEEEEECSCBSS----------------------------CCHHHHHTEEEEE
T ss_pred C---------------------CcCCCccEEEECCchHH----------------------------HHHHHHHHhcCCC
Confidence 0 01257999999876421 1245678999999
Q ss_pred EEEEEcC
Q 004759 230 RIVYSTC 236 (732)
Q Consensus 230 rLVYSTC 236 (732)
+||.++-
T Consensus 189 ~lvi~~~ 195 (227)
T 1r18_A 189 RLIVPVG 195 (227)
T ss_dssp EEEEEES
T ss_pred EEEEEEe
Confidence 9998754
No 109
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.86 E-value=1.8e-08 Score=105.17 Aligned_cols=120 Identities=16% Similarity=0.084 Sum_probs=91.9
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPG 151 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~ 151 (732)
.++++++.+|||+|||+|..+..+++..+ ..|+++|+++..+..+++++...+.. ++.+...|+..+
T Consensus 67 ~~~~~~~~~vLDiGcG~G~~~~~la~~~~----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 134 (302)
T 3hem_A 67 KLNLEPGMTLLDIGCGWGSTMRHAVAEYD----------VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-- 134 (302)
T ss_dssp TTCCCTTCEEEEETCTTSHHHHHHHHHHC----------CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--
T ss_pred HcCCCCcCEEEEeeccCcHHHHHHHHhCC----------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--
Confidence 45788999999999999999999988752 58999999999999999999998876 788888887653
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
...||+|++. +++..-|+.+. . .-......++..+.++|||||++
T Consensus 135 ----------------------~~~fD~v~~~------~~~~~~~d~~~------~-~~~~~~~~~l~~~~~~LkpgG~l 179 (302)
T 3hem_A 135 ----------------------DEPVDRIVSL------GAFEHFADGAG------D-AGFERYDTFFKKFYNLTPDDGRM 179 (302)
T ss_dssp ----------------------CCCCSEEEEE------SCGGGTTCCSS------C-CCTTHHHHHHHHHHHSSCTTCEE
T ss_pred ----------------------CCCccEEEEc------chHHhcCcccc------c-cchhHHHHHHHHHHHhcCCCcEE
Confidence 1679999974 23322222110 0 00123457899999999999999
Q ss_pred EEEcCCCC
Q 004759 232 VYSTCSMN 239 (732)
Q Consensus 232 VYSTCSln 239 (732)
+.++.+..
T Consensus 180 ~i~~~~~~ 187 (302)
T 3hem_A 180 LLHTITIP 187 (302)
T ss_dssp EEEEEECC
T ss_pred EEEEEecc
Confidence 99887654
No 110
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.86 E-value=1.3e-08 Score=100.42 Aligned_cols=109 Identities=18% Similarity=0.203 Sum_probs=85.0
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCC
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPG 151 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~ 151 (732)
.++.+.++.+|||+|||+|..+..++...+ +.+.|+++|+++.++..+++++...+..++.+...|+....
T Consensus 71 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~- 141 (215)
T 2yxe_A 71 ELLDLKPGMKVLEIGTGCGYHAAVTAEIVG--------EDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY- 141 (215)
T ss_dssp HHTTCCTTCEEEEECCTTSHHHHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC-
T ss_pred HhhCCCCCCEEEEECCCccHHHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-
Confidence 345788999999999999999999998763 24799999999999999999999998888888888764311
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
.....||.|+++.++.. . ...+.++|||||+|
T Consensus 142 --------------------~~~~~fD~v~~~~~~~~------~----------------------~~~~~~~L~pgG~l 173 (215)
T 2yxe_A 142 --------------------EPLAPYDRIYTTAAGPK------I----------------------PEPLIRQLKDGGKL 173 (215)
T ss_dssp --------------------GGGCCEEEEEESSBBSS------C----------------------CHHHHHTEEEEEEE
T ss_pred --------------------CCCCCeeEEEECCchHH------H----------------------HHHHHHHcCCCcEE
Confidence 01257999998654221 0 13567899999999
Q ss_pred EEEcCC
Q 004759 232 VYSTCS 237 (732)
Q Consensus 232 VYSTCS 237 (732)
+.++.+
T Consensus 174 v~~~~~ 179 (215)
T 2yxe_A 174 LMPVGR 179 (215)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 988643
No 111
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.86 E-value=1.3e-09 Score=115.77 Aligned_cols=106 Identities=12% Similarity=0.086 Sum_probs=71.8
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC----CHHHHHHHHHHHHHcCCCceEEEec-ccccCC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL----DVQRCNLLIHQTKRMCTANLIVTNH-EAQHFP 150 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi----d~~Rl~~L~~n~kRlg~~ni~Vt~~-Da~~fp 150 (732)
++||.+|||+|||||++|..+++. |.|+|+|+ +..++..+ ..++++.+++.+... |+..++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~------------~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~ 145 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL------------KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIP 145 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS------------TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc------------CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCC
Confidence 578999999999999999988764 46999998 45433111 012233356777766 655432
Q ss_pred CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCE
Q 004759 151 GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR 230 (732)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGr 230 (732)
...||.|+||.+|+ .|.. .++ +..+..+|..+.++|||||+
T Consensus 146 -----------------------~~~fD~V~sd~~~~-~g~~--~~d-------------~~~~l~~L~~~~~~LkpGG~ 186 (305)
T 2p41_A 146 -----------------------PERCDTLLCDIGES-SPNP--TVE-------------AGRTLRVLNLVENWLSNNTQ 186 (305)
T ss_dssp -----------------------CCCCSEEEECCCCC-CSSH--HHH-------------HHHHHHHHHHHHHHCCTTCE
T ss_pred -----------------------cCCCCEEEECCccc-cCcc--hhh-------------HHHHHHHHHHHHHHhCCCCE
Confidence 15799999999987 5531 000 11123578888899999998
Q ss_pred EEEE
Q 004759 231 IVYS 234 (732)
Q Consensus 231 LVYS 234 (732)
+|..
T Consensus 187 ~v~k 190 (305)
T 2p41_A 187 FCVK 190 (305)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8864
No 112
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.86 E-value=2.1e-08 Score=100.02 Aligned_cols=111 Identities=14% Similarity=0.169 Sum_probs=85.1
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
..++.+|||+|||+|..+..+++.. |...|+++|+++..+..++.++...+ ++.+...|+..++.
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~---- 106 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY---------PEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDF---- 106 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCC----
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC---------CCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCC----
Confidence 5778999999999999999998874 35799999999999999888765544 78888888876542
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
. ..||.|++... +..-++ ....++|.++.++|||||+++.++
T Consensus 107 -----------------~-~~fD~v~~~~~------l~~~~~--------------~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 107 -----------------E-EKYDMVVSALS------IHHLED--------------EDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp -----------------C-SCEEEEEEESC------GGGSCH--------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------C-CCceEEEEeCc------cccCCH--------------HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 1 57999998432 211111 122468999999999999999987
Q ss_pred CCCC
Q 004759 236 CSMN 239 (732)
Q Consensus 236 CSln 239 (732)
....
T Consensus 149 ~~~~ 152 (234)
T 3dtn_A 149 LVHG 152 (234)
T ss_dssp ECBC
T ss_pred ecCC
Confidence 6653
No 113
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.86 E-value=1.3e-08 Score=104.52 Aligned_cols=123 Identities=17% Similarity=0.192 Sum_probs=94.1
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
+.++.+|||+|||+|..+..++.. ...|+|+|+|+.++..+++|+.+.+.. +.+...|+...
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-----------g~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~------ 179 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-----------GGKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA------ 179 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-----------TCEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH------
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-----------CCeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc------
Confidence 578999999999999998887663 128999999999999999999998876 77777665431
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
.....||.|+++.+. .....++..+.++|||||+++.|.
T Consensus 180 ----------------~~~~~fD~Vv~n~~~-------------------------~~~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 180 ----------------LPFGPFDLLVANLYA-------------------------ELHAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp ----------------GGGCCEEEEEEECCH-------------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----------------CcCCCCCEEEECCcH-------------------------HHHHHHHHHHHHHcCCCCEEEEEe
Confidence 112579999986531 112568899999999999999986
Q ss_pred CCCCCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 236 CSMNPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 236 CSlnp~ENEaVV~~~L~~~~~~velvd 262 (732)
... +...-+.+++++.| ++++.
T Consensus 219 ~~~---~~~~~v~~~l~~~G--f~~~~ 240 (254)
T 2nxc_A 219 ILK---DRAPLVREAMAGAG--FRPLE 240 (254)
T ss_dssp EEG---GGHHHHHHHHHHTT--CEEEE
T ss_pred ecc---CCHHHHHHHHHHCC--CEEEE
Confidence 544 45677788888876 44444
No 114
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.86 E-value=4.6e-09 Score=99.04 Aligned_cols=115 Identities=16% Similarity=0.088 Sum_probs=83.0
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..++.. + ..|+++|+++..+..++++++..+. ++.+.+.|+..+...
T Consensus 40 ~~~~~vLD~GcG~G~~~~~l~~~-~----------~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~---- 103 (171)
T 1ws6_A 40 PRRGRFLDPFAGSGAVGLEAASE-G----------WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPE---- 103 (171)
T ss_dssp TTCCEEEEETCSSCHHHHHHHHT-T----------CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHH----
T ss_pred cCCCeEEEeCCCcCHHHHHHHHC-C----------CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHh----
Confidence 36889999999999999988775 1 2399999999999999999998887 788888887652110
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
.......||.|++|+|.. +.. + .....+. + .++|||||+++.+++
T Consensus 104 -------------~~~~~~~~D~i~~~~~~~--~~~---~---------------~~~~~~~-~-~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 104 -------------AKAQGERFTVAFMAPPYA--MDL---A---------------ALFGELL-A-SGLVEAGGLYVLQHP 148 (171)
T ss_dssp -------------HHHTTCCEEEEEECCCTT--SCT---T---------------HHHHHHH-H-HTCEEEEEEEEEEEE
T ss_pred -------------hhccCCceEEEEECCCCc--hhH---H---------------HHHHHHH-h-hcccCCCcEEEEEeC
Confidence 000123799999999865 211 1 1111222 2 589999999999888
Q ss_pred CCCCcC
Q 004759 237 SMNPVE 242 (732)
Q Consensus 237 Slnp~E 242 (732)
+.....
T Consensus 149 ~~~~~~ 154 (171)
T 1ws6_A 149 KDLYLP 154 (171)
T ss_dssp TTSCCT
T ss_pred CccCCc
Confidence 765443
No 115
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.86 E-value=8.7e-09 Score=103.67 Aligned_cols=108 Identities=19% Similarity=0.225 Sum_probs=82.3
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
++++++.+|||+|||+|..+.+++...+ .+.|+|+|+++.++..++++++.. .++.+...|+......
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~---------~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~- 137 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD---------KGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEY- 137 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT---------TSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGG-
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC---------CcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccc-
Confidence 4567899999999999999999998753 479999999999999999887655 6888888887651100
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
.... ..||.|++|++- |+ ....+|..+.++|||||+++.
T Consensus 138 ----------------~~~~-~~~D~v~~~~~~---------~~---------------~~~~~l~~~~~~LkpgG~l~i 176 (230)
T 1fbn_A 138 ----------------ANIV-EKVDVIYEDVAQ---------PN---------------QAEILIKNAKWFLKKGGYGMI 176 (230)
T ss_dssp ----------------TTTS-CCEEEEEECCCS---------TT---------------HHHHHHHHHHHHEEEEEEEEE
T ss_pred ----------------cccC-ccEEEEEEecCC---------hh---------------HHHHHHHHHHHhCCCCcEEEE
Confidence 0011 579999987651 11 113468889999999999998
Q ss_pred E
Q 004759 234 S 234 (732)
Q Consensus 234 S 234 (732)
+
T Consensus 177 ~ 177 (230)
T 1fbn_A 177 A 177 (230)
T ss_dssp E
T ss_pred E
Confidence 6
No 116
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.85 E-value=1.7e-08 Score=99.94 Aligned_cols=144 Identities=10% Similarity=-0.031 Sum_probs=98.7
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-----ceEEEecccccC
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-----NLIVTNHEAQHF 149 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-----ni~Vt~~Da~~f 149 (732)
...++.+|||+|||+|..+..++... +...|+++|+++..+..+++++...+.. ++.+...|+...
T Consensus 26 ~~~~~~~vLDiGcG~G~~~~~l~~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (219)
T 3jwg_A 26 KSVNAKKVIDLGCGEGNLLSLLLKDK---------SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR 96 (219)
T ss_dssp HHTTCCEEEEETCTTCHHHHHHHTST---------TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC
T ss_pred hhcCCCEEEEecCCCCHHHHHHHhcC---------CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc
Confidence 34678899999999999998887642 2469999999999999999988766654 688888887443
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
+ .....||.|++. +++..-++ ....++|..+.++|||||
T Consensus 97 ~---------------------~~~~~fD~V~~~------~~l~~~~~--------------~~~~~~l~~~~~~LkpgG 135 (219)
T 3jwg_A 97 D---------------------KRFSGYDAATVI------EVIEHLDE--------------NRLQAFEKVLFEFTRPQT 135 (219)
T ss_dssp C---------------------GGGTTCSEEEEE------SCGGGCCH--------------HHHHHHHHHHHTTTCCSE
T ss_pred c---------------------cccCCCCEEEEH------HHHHhCCH--------------HHHHHHHHHHHHhhCCCE
Confidence 2 112679999973 12211111 123578999999999999
Q ss_pred EEEEEcCCCC----------------------CcCcHHHHHHHHHHCCCcEEEEecCccCC
Q 004759 230 RIVYSTCSMN----------------------PVENEAVVAEILRKCEGSVELVDVSNEVP 268 (732)
Q Consensus 230 rLVYSTCSln----------------------p~ENEaVV~~~L~~~~~~velvd~s~~lP 268 (732)
.++.+.++-. +.|=..-+..+++++|-.+++..+....|
T Consensus 136 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~~~ 196 (219)
T 3jwg_A 136 VIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQIGEIDD 196 (219)
T ss_dssp EEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEEESCCCT
T ss_pred EEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEEecCCccc
Confidence 7776655421 11112233377777776777766655444
No 117
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.85 E-value=8.4e-09 Score=104.93 Aligned_cols=111 Identities=16% Similarity=0.191 Sum_probs=86.0
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCC
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPG 151 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~ 151 (732)
..+.+.++.+|||+|||+|..+..++.. .+.|+++|+++.++..++++++..+.+++.+...|+..+|.
T Consensus 31 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~ 99 (260)
T 1vl5_A 31 QIAALKGNEEVLDVATGGGHVANAFAPF-----------VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF 99 (260)
T ss_dssp HHHTCCSCCEEEEETCTTCHHHHHHGGG-----------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS
T ss_pred HHhCCCCCCEEEEEeCCCCHHHHHHHHh-----------CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCC
Confidence 3456789999999999999998888764 25899999999999999999998888889999998876541
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
....||.|++... +..-+ ....+|.++.++|||||+|
T Consensus 100 ---------------------~~~~fD~V~~~~~------l~~~~----------------d~~~~l~~~~r~LkpgG~l 136 (260)
T 1vl5_A 100 ---------------------TDERFHIVTCRIA------AHHFP----------------NPASFVSEAYRVLKKGGQL 136 (260)
T ss_dssp ---------------------CTTCEEEEEEESC------GGGCS----------------CHHHHHHHHHHHEEEEEEE
T ss_pred ---------------------CCCCEEEEEEhhh------hHhcC----------------CHHHHHHHHHHHcCCCCEE
Confidence 1267999997421 11111 1236889999999999999
Q ss_pred EEEcC
Q 004759 232 VYSTC 236 (732)
Q Consensus 232 VYSTC 236 (732)
+.++.
T Consensus 137 ~~~~~ 141 (260)
T 1vl5_A 137 LLVDN 141 (260)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98743
No 118
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.84 E-value=4e-08 Score=95.78 Aligned_cols=107 Identities=14% Similarity=0.096 Sum_probs=82.2
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
+.++ +|||++||+|..+..++.. ...|+++|+++..+..++.++...+. ++.+...|+..++.
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~---- 90 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL-----------GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDI---- 90 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT-----------TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSC----
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC-----------CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCC----
Confidence 5677 9999999999998887664 25899999999999999999888776 77888888766431
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
....||.|++.. ..+ . ......+|..+.++|||||+++.++
T Consensus 91 -----------------~~~~fD~v~~~~-----~~~--~---------------~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 91 -----------------VADAWEGIVSIF-----CHL--P---------------SSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp -----------------CTTTCSEEEEEC-----CCC--C---------------HHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred -----------------CcCCccEEEEEh-----hcC--C---------------HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 125799999721 111 0 1234678999999999999999987
Q ss_pred CCC
Q 004759 236 CSM 238 (732)
Q Consensus 236 CSl 238 (732)
.+.
T Consensus 132 ~~~ 134 (202)
T 2kw5_A 132 FAP 134 (202)
T ss_dssp ECT
T ss_pred ecc
Confidence 654
No 119
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.84 E-value=1.2e-08 Score=111.67 Aligned_cols=114 Identities=15% Similarity=0.163 Sum_probs=91.3
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..++.. ...|+++|+|+..+..+++++..++.. +.+...|+..++.
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~-----------g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~~----- 294 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM-----------GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEALT----- 294 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT-----------TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTSC-----
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhccc-----
Confidence 47889999999999999999875 258999999999999999999988865 6777888766431
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
....||.|++|+|+...+.. ......+++..+.++|||||+++.+++
T Consensus 295 ----------------~~~~fD~Ii~npp~~~~~~~-----------------~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 295 ----------------EEARFDIIVTNPPFHVGGAV-----------------ILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp ----------------TTCCEEEEEECCCCCTTCSS-----------------CCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ----------------cCCCeEEEEECCchhhcccc-----------------cHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 12679999999997643321 123456789999999999999999988
Q ss_pred CCCC
Q 004759 237 SMNP 240 (732)
Q Consensus 237 Slnp 240 (732)
...+
T Consensus 342 ~~l~ 345 (381)
T 3dmg_A 342 PFLK 345 (381)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 7754
No 120
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.84 E-value=3.1e-08 Score=101.13 Aligned_cols=113 Identities=19% Similarity=0.235 Sum_probs=88.0
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPG 151 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~ 151 (732)
.+.+.++.+|||++||+|..+..+++.. .+.|+++|+++..+..+++++...+.. ++.+...|+..+|.
T Consensus 56 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 125 (273)
T 3bus_A 56 LLDVRSGDRVLDVGCGIGKPAVRLATAR----------DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF 125 (273)
T ss_dssp HSCCCTTCEEEEESCTTSHHHHHHHHHS----------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS
T ss_pred hcCCCCCCEEEEeCCCCCHHHHHHHHhc----------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC
Confidence 4567899999999999999999998763 368999999999999999999888865 68888888876441
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
....||.|++.- .+.+.++ ...+|.++.++|||||++
T Consensus 126 ---------------------~~~~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~L~pgG~l 162 (273)
T 3bus_A 126 ---------------------EDASFDAVWALE------SLHHMPD----------------RGRALREMARVLRPGGTV 162 (273)
T ss_dssp ---------------------CTTCEEEEEEES------CTTTSSC----------------HHHHHHHHHTTEEEEEEE
T ss_pred ---------------------CCCCccEEEEec------hhhhCCC----------------HHHHHHHHHHHcCCCeEE
Confidence 126799999732 2211111 146899999999999999
Q ss_pred EEEcCCC
Q 004759 232 VYSTCSM 238 (732)
Q Consensus 232 VYSTCSl 238 (732)
+.++...
T Consensus 163 ~i~~~~~ 169 (273)
T 3bus_A 163 AIADFVL 169 (273)
T ss_dssp EEEEEEE
T ss_pred EEEEeec
Confidence 9887553
No 121
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.83 E-value=2.1e-08 Score=97.93 Aligned_cols=111 Identities=11% Similarity=0.100 Sum_probs=86.4
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~ 152 (732)
+.+.++ +|||+|||+|..+..++.. . ...|+++|+++..+..++++++..+.. ++.+...|+..++.
T Consensus 40 ~~~~~~-~vLdiG~G~G~~~~~l~~~-~---------~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~- 107 (219)
T 3dlc_A 40 FGITAG-TCIDIGSGPGALSIALAKQ-S---------DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI- 107 (219)
T ss_dssp HCCCEE-EEEEETCTTSHHHHHHHHH-S---------EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS-
T ss_pred cCCCCC-EEEEECCCCCHHHHHHHHc-C---------CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC-
Confidence 455667 9999999999999999886 2 479999999999999999999998864 78888888876541
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
....||.|++... +..- ....++|.++.++|||||+++
T Consensus 108 --------------------~~~~~D~v~~~~~------l~~~----------------~~~~~~l~~~~~~L~pgG~l~ 145 (219)
T 3dlc_A 108 --------------------EDNYADLIVSRGS------VFFW----------------EDVATAFREIYRILKSGGKTY 145 (219)
T ss_dssp --------------------CTTCEEEEEEESC------GGGC----------------SCHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------CcccccEEEECch------Hhhc----------------cCHHHHHHHHHHhCCCCCEEE
Confidence 1267999998432 1111 112468999999999999999
Q ss_pred EEcCCC
Q 004759 233 YSTCSM 238 (732)
Q Consensus 233 YSTCSl 238 (732)
.++...
T Consensus 146 ~~~~~~ 151 (219)
T 3dlc_A 146 IGGGFG 151 (219)
T ss_dssp EEECCS
T ss_pred EEeccC
Confidence 986444
No 122
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.83 E-value=5.2e-08 Score=98.98 Aligned_cols=157 Identities=12% Similarity=0.085 Sum_probs=98.9
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEeccccc-CCCCccC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQH-FPGCRAN 155 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~Vt~~Da~~-fp~~~~~ 155 (732)
++.+|||+|||+|..+..++.... .+.|+|+|+++..+..+++++++.+..+ +.+.+.|+.. +... +
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~---------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~- 133 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN---------GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDA-L- 133 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH---------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTT-S-
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC---------CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhh-h-
Confidence 678999999999999999988753 3789999999999999999999998765 8899888765 2110 0
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCC-cccc--Chhh-----hhhcccccc-----cchHHHHHHHHHHHH
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG-TLRK--APDI-----WRKWNVGLG-----NGLHSLQVQIAMRGI 222 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdG-tlrk--~pd~-----w~~ws~~~~-----~~L~~lQ~~IL~rAl 222 (732)
.......||.|++|+|+...+ .+.. .+++ +..+-.... .+-..+...++..+.
T Consensus 134 --------------~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~ 199 (254)
T 2h00_A 134 --------------KEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSL 199 (254)
T ss_dssp --------------TTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHH
T ss_pred --------------hcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHH
Confidence 000014799999999998765 1100 0100 001000000 011234456777788
Q ss_pred hhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCCC-cEEEEe
Q 004759 223 SLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEG-SVELVD 262 (732)
Q Consensus 223 ~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~~-~velvd 262 (732)
++++++|.++. .+....+...+.+.|++.|. .++..+
T Consensus 200 ~~l~~~g~~~~---~~~~~~~~~~~~~~l~~~Gf~~v~~~~ 237 (254)
T 2h00_A 200 QLKKRLRWYSC---MLGKKCSLAPLKEELRIQGVPKVTYTE 237 (254)
T ss_dssp HHGGGBSCEEE---EESSTTSHHHHHHHHHHTTCSEEEEEE
T ss_pred hcccceEEEEE---CCCChhHHHHHHHHHHHcCCCceEEEE
Confidence 89999996653 33444564566778888763 344444
No 123
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.83 E-value=2.9e-08 Score=102.37 Aligned_cols=112 Identities=17% Similarity=0.128 Sum_probs=86.0
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPG 151 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~ 151 (732)
.+++.++.+|||++||+|..+..+++..+ ..|+++|+++..+..+++++++.+. .++.+...|+..+|
T Consensus 59 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~----------~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 127 (287)
T 1kpg_A 59 KLGLQPGMTLLDVGCGWGATMMRAVEKYD----------VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD- 127 (287)
T ss_dssp TTTCCTTCEEEEETCTTSHHHHHHHHHHC----------CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-
T ss_pred HcCCCCcCEEEEECCcccHHHHHHHHHcC----------CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-
Confidence 35678999999999999999999986642 4899999999999999999888775 47888888775432
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
..||.|++. +++.+-++ .....+|.++.++|||||++
T Consensus 128 -----------------------~~fD~v~~~------~~l~~~~~--------------~~~~~~l~~~~~~LkpgG~l 164 (287)
T 1kpg_A 128 -----------------------EPVDRIVSI------GAFEHFGH--------------ERYDAFFSLAHRLLPADGVM 164 (287)
T ss_dssp -----------------------CCCSEEEEE------SCGGGTCT--------------TTHHHHHHHHHHHSCTTCEE
T ss_pred -----------------------CCeeEEEEe------CchhhcCh--------------HHHHHHHHHHHHhcCCCCEE
Confidence 569999973 12211110 12356889999999999999
Q ss_pred EEEcCCC
Q 004759 232 VYSTCSM 238 (732)
Q Consensus 232 VYSTCSl 238 (732)
+.++...
T Consensus 165 ~~~~~~~ 171 (287)
T 1kpg_A 165 LLHTITG 171 (287)
T ss_dssp EEEEEEE
T ss_pred EEEEecC
Confidence 9887654
No 124
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.82 E-value=9.5e-09 Score=102.52 Aligned_cols=105 Identities=17% Similarity=0.109 Sum_probs=81.6
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCC
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPG 151 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~ 151 (732)
..+.+.++.+|||+|||+|..+..++.. .+.|+++|+++.++..+++++...+ ++.+...|+....
T Consensus 64 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~-----------~~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~- 129 (231)
T 1vbf_A 64 DELDLHKGQKVLEIGTGIGYYTALIAEI-----------VDKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGY- 129 (231)
T ss_dssp HHTTCCTTCEEEEECCTTSHHHHHHHHH-----------SSEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCC-
T ss_pred HhcCCCCCCEEEEEcCCCCHHHHHHHHH-----------cCEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCccccc-
Confidence 4457889999999999999999999886 2689999999999999999887776 7888888876511
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
.....||.|+++.++... ...+.++|||||++
T Consensus 130 --------------------~~~~~fD~v~~~~~~~~~----------------------------~~~~~~~L~pgG~l 161 (231)
T 1vbf_A 130 --------------------EEEKPYDRVVVWATAPTL----------------------------LCKPYEQLKEGGIM 161 (231)
T ss_dssp --------------------GGGCCEEEEEESSBBSSC----------------------------CHHHHHTEEEEEEE
T ss_pred --------------------ccCCCccEEEECCcHHHH----------------------------HHHHHHHcCCCcEE
Confidence 012579999997653210 12467799999999
Q ss_pred EEEcCCC
Q 004759 232 VYSTCSM 238 (732)
Q Consensus 232 VYSTCSl 238 (732)
++++.+-
T Consensus 162 ~~~~~~~ 168 (231)
T 1vbf_A 162 ILPIGVG 168 (231)
T ss_dssp EEEECSS
T ss_pred EEEEcCC
Confidence 9987653
No 125
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.81 E-value=1.1e-08 Score=103.16 Aligned_cols=108 Identities=16% Similarity=0.188 Sum_probs=83.4
Q ss_pred hhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCC
Q 004759 71 PLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 150 (732)
Q Consensus 71 ~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp 150 (732)
..++++.++++|||+|||+|..+..++... + +.|+++|+++.++..++.+++..+..++.+...|+.. +
T Consensus 84 ~~~l~~~~~~~vLdiG~G~G~~~~~la~~~---------~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~ 152 (235)
T 1jg1_A 84 LEIANLKPGMNILEVGTGSGWNAALISEIV---------K-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK-G 152 (235)
T ss_dssp HHHHTCCTTCCEEEECCTTSHHHHHHHHHH---------C-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-C
T ss_pred HHhcCCCCCCEEEEEeCCcCHHHHHHHHHh---------C-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc-C
Confidence 345678999999999999999999998874 2 5799999999999999999999998888888887621 1
Q ss_pred CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCE
Q 004759 151 GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR 230 (732)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGr 230 (732)
+ .....||+|+++.++.. +...+.++|||||+
T Consensus 153 -~-------------------~~~~~fD~Ii~~~~~~~----------------------------~~~~~~~~L~pgG~ 184 (235)
T 1jg1_A 153 -F-------------------PPKAPYDVIIVTAGAPK----------------------------IPEPLIEQLKIGGK 184 (235)
T ss_dssp -C-------------------GGGCCEEEEEECSBBSS----------------------------CCHHHHHTEEEEEE
T ss_pred -C-------------------CCCCCccEEEECCcHHH----------------------------HHHHHHHhcCCCcE
Confidence 0 01145999998755211 01245779999999
Q ss_pred EEEEcCC
Q 004759 231 IVYSTCS 237 (732)
Q Consensus 231 LVYSTCS 237 (732)
|+.++-.
T Consensus 185 lvi~~~~ 191 (235)
T 1jg1_A 185 LIIPVGS 191 (235)
T ss_dssp EEEEECS
T ss_pred EEEEEec
Confidence 9987643
No 126
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.81 E-value=2e-08 Score=98.92 Aligned_cols=138 Identities=20% Similarity=0.198 Sum_probs=97.6
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCC
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPG 151 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~ 151 (732)
.++...++.+|||+|||+|..+..+++. ...|+|+|+++..+..+++++... .++.+...|+..++.
T Consensus 45 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~ 111 (216)
T 3ofk_A 45 LSLSSGAVSNGLEIGCAAGAFTEKLAPH-----------CKRLTVIDVMPRAIGRACQRTKRW--SHISWAATDILQFST 111 (216)
T ss_dssp HHTTTSSEEEEEEECCTTSHHHHHHGGG-----------EEEEEEEESCHHHHHHHHHHTTTC--SSEEEEECCTTTCCC
T ss_pred HHcccCCCCcEEEEcCCCCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHhcccC--CCeEEEEcchhhCCC
Confidence 3456678899999999999999888664 368999999999999998877654 378888888876541
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
...||.|++. +++.+-++ .....++|.++.++|||||++
T Consensus 112 ----------------------~~~fD~v~~~------~~l~~~~~-------------~~~~~~~l~~~~~~L~pgG~l 150 (216)
T 3ofk_A 112 ----------------------AELFDLIVVA------EVLYYLED-------------MTQMRTAIDNMVKMLAPGGHL 150 (216)
T ss_dssp ----------------------SCCEEEEEEE------SCGGGSSS-------------HHHHHHHHHHHHHTEEEEEEE
T ss_pred ----------------------CCCccEEEEc------cHHHhCCC-------------HHHHHHHHHHHHHHcCCCCEE
Confidence 2679999984 22221111 122346899999999999999
Q ss_pred EEEcC------CCCCcCcHHHHHHHHHHCCCcEEEEec
Q 004759 232 VYSTC------SMNPVENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 232 VYSTC------Slnp~ENEaVV~~~L~~~~~~velvd~ 263 (732)
+++|. ++........+..++...-..++.+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 188 (216)
T 3ofk_A 151 VFGSARDATCRRWGHVAGAETVITILTEALTEVERVQC 188 (216)
T ss_dssp EEEEECHHHHHHTTCSCCHHHHHHHHHHHSEEEEEEEE
T ss_pred EEEecCCCcchhhhhhhhHHHHHHHHHhhccceEEEec
Confidence 99862 233356666666667654334444443
No 127
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.81 E-value=5.4e-09 Score=105.63 Aligned_cols=131 Identities=12% Similarity=0.101 Sum_probs=91.6
Q ss_pred cchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEeccc
Q 004759 68 MVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEA 146 (732)
Q Consensus 68 mlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~Vt~~Da 146 (732)
.+...++...++.+|||+|||+|..+..++..+.. .+.|+++|+++.++..+++++++.+..+ +.+...|+
T Consensus 50 ~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~--------~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~ 121 (239)
T 2hnk_A 50 QFLNILTKISGAKRIIEIGTFTGYSSLCFASALPE--------DGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA 121 (239)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCT--------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred HHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCC--------CCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH
Confidence 33444556778999999999999999999987531 4799999999999999999999988865 88888887
Q ss_pred ccC-CCCccCCCCCCCCcccccccccccc--ccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHh
Q 004759 147 QHF-PGCRANKNFSSASDKGIESESNMGQ--LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGIS 223 (732)
Q Consensus 147 ~~f-p~~~~~~~~~~~~~~~~~~~~~~~~--~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~ 223 (732)
..+ +.+...... ..+ . ..+.. ..||.|++|.. . + ....++..+.+
T Consensus 122 ~~~~~~~~~~~~~-----~~~-~-~~f~~~~~~fD~I~~~~~------~---~----------------~~~~~l~~~~~ 169 (239)
T 2hnk_A 122 LETLQVLIDSKSA-----PSW-A-SDFAFGPSSIDLFFLDAD------K---E----------------NYPNYYPLILK 169 (239)
T ss_dssp HHHHHHHHHCSSC-----CGG-G-TTTCCSTTCEEEEEECSC------G---G----------------GHHHHHHHHHH
T ss_pred HHHHHHHHhhccc-----ccc-c-ccccCCCCCcCEEEEeCC------H---H----------------HHHHHHHHHHH
Confidence 542 111000000 000 0 01111 57999999742 0 0 01256888999
Q ss_pred hccCCCEEEEEcCCC
Q 004759 224 LLKVGGRIVYSTCSM 238 (732)
Q Consensus 224 lLKpGGrLVYSTCSl 238 (732)
+|+|||+||..++.+
T Consensus 170 ~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 170 LLKPGGLLIADNVLW 184 (239)
T ss_dssp HEEEEEEEEEECSSG
T ss_pred HcCCCeEEEEEcccc
Confidence 999999999987655
No 128
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.80 E-value=4.5e-08 Score=96.85 Aligned_cols=112 Identities=17% Similarity=0.164 Sum_probs=84.0
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-----ceEEEecccccCC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-----NLIVTNHEAQHFP 150 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-----ni~Vt~~Da~~fp 150 (732)
++++.+|||+|||+|..+..++.. ...|+++|+++..+..++.++...+.. ++.+...|+..++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 96 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-----------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS 96 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-----------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC
Confidence 568999999999999999988775 258999999999999999887766652 5677778776643
Q ss_pred CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCE
Q 004759 151 GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR 230 (732)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGr 230 (732)
. ....||.|++.. .+...++. ....++|..+.++|||||+
T Consensus 97 ~---------------------~~~~~D~v~~~~------~l~~~~~~-------------~~~~~~l~~~~~~L~pgG~ 136 (235)
T 3sm3_A 97 F---------------------HDSSFDFAVMQA------FLTSVPDP-------------KERSRIIKEVFRVLKPGAY 136 (235)
T ss_dssp S---------------------CTTCEEEEEEES------CGGGCCCH-------------HHHHHHHHHHHHHEEEEEE
T ss_pred C---------------------CCCceeEEEEcc------hhhcCCCH-------------HHHHHHHHHHHHHcCCCeE
Confidence 1 126799999842 22211111 1234689999999999999
Q ss_pred EEEEcCCC
Q 004759 231 IVYSTCSM 238 (732)
Q Consensus 231 LVYSTCSl 238 (732)
|+.++...
T Consensus 137 l~~~~~~~ 144 (235)
T 3sm3_A 137 LYLVEFGQ 144 (235)
T ss_dssp EEEEEEBC
T ss_pred EEEEECCc
Confidence 99987654
No 129
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.80 E-value=6.9e-08 Score=100.05 Aligned_cols=110 Identities=14% Similarity=0.103 Sum_probs=87.1
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCCc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~~ 153 (732)
++.++.+|||++||+|..+..++...+ ..|+++|+++..+..++++++..+. .++.+...|+..+|.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 146 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFG----------VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC-- 146 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC----------CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS--
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhC----------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC--
Confidence 678999999999999999999988752 4899999999999999999988887 478888888876542
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
....||.|++. +++.+-++ ...+|..+.++|||||+|+.
T Consensus 147 -------------------~~~~fD~v~~~------~~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~ 185 (297)
T 2o57_A 147 -------------------EDNSYDFIWSQ------DAFLHSPD----------------KLKVFQECARVLKPRGVMAI 185 (297)
T ss_dssp -------------------CTTCEEEEEEE------SCGGGCSC----------------HHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------CCCCEeEEEec------chhhhcCC----------------HHHHHHHHHHHcCCCeEEEE
Confidence 12679999973 12211111 25689999999999999999
Q ss_pred EcCC
Q 004759 234 STCS 237 (732)
Q Consensus 234 STCS 237 (732)
++..
T Consensus 186 ~~~~ 189 (297)
T 2o57_A 186 TDPM 189 (297)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8754
No 130
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.80 E-value=2.6e-08 Score=96.18 Aligned_cols=109 Identities=16% Similarity=0.017 Sum_probs=84.0
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
+++..++.+|||+|||+|..+..++.. ...|+++|+++..+..+++++...+.+++.+...|+..++.
T Consensus 27 ~~~~~~~~~vLdiG~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~- 94 (199)
T 2xvm_A 27 AVKVVKPGKTLDLGCGNGRNSLYLAAN-----------GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF- 94 (199)
T ss_dssp HTTTSCSCEEEEETCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-
T ss_pred HhhccCCCeEEEEcCCCCHHHHHHHHC-----------CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-
Confidence 345567889999999999999988775 25899999999999999999988888788888888776431
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
...||.|++... +...+ + ....++|..+.++|||||+++
T Consensus 95 ---------------------~~~~D~v~~~~~------l~~~~-------~-------~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 95 ---------------------DRQYDFILSTVV------LMFLE-------A-------KTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp ---------------------CCCEEEEEEESC------GGGSC-------G-------GGHHHHHHHHHHTEEEEEEEE
T ss_pred ---------------------CCCceEEEEcch------hhhCC-------H-------HHHHHHHHHHHHhcCCCeEEE
Confidence 267999997432 11110 0 123568899999999999987
Q ss_pred EE
Q 004759 233 YS 234 (732)
Q Consensus 233 YS 234 (732)
+.
T Consensus 134 ~~ 135 (199)
T 2xvm_A 134 IV 135 (199)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 131
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.80 E-value=1.9e-08 Score=98.43 Aligned_cols=103 Identities=17% Similarity=0.160 Sum_probs=83.9
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
++.+|||+|||+|..+..++... +.+.|+++|+++..+..+++++++.+..++.+...|+..++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~------ 129 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR---------PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS------ 129 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC---------TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC------
T ss_pred CCCeEEEECCCCCHHHHHHHHHC---------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc------
Confidence 58899999999999999998864 357999999999999999999999998888888888766431
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 237 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS 237 (732)
...||.|++..- .....++..+.++|+|||+++.....
T Consensus 130 ----------------~~~~D~i~~~~~--------------------------~~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 130 ----------------EPPFDGVISRAF--------------------------ASLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp ----------------CSCEEEEECSCS--------------------------SSHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred ----------------cCCcCEEEEecc--------------------------CCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 157999997320 00236889999999999999987544
No 132
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.79 E-value=1.5e-09 Score=113.94 Aligned_cols=127 Identities=20% Similarity=0.237 Sum_probs=90.1
Q ss_pred hhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEeccccc
Q 004759 70 PPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQH 148 (732)
Q Consensus 70 p~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~ 148 (732)
.+..+++.++++|||+|||+|..|..|++. .+.|+|+|+|+..+..+++++...+. .++.+..+|+..
T Consensus 20 i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 20 IIDKAALRPTDVVLEVGPGTGNMTVKLLEK-----------AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLK 88 (285)
T ss_dssp HHHHTCCCTTCEEEEECCTTSTTHHHHHHH-----------SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTT
T ss_pred HHHhcCCCCCCEEEEEcCcccHHHHHHHhh-----------CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceec
Confidence 334567889999999999999999999886 36899999999999999998876665 578999998876
Q ss_pred CCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhh--cccccccchHHHHHHHHHHHHhhcc
Q 004759 149 FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRK--WNVGLGNGLHSLQVQIAMRGISLLK 226 (732)
Q Consensus 149 fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~--ws~~~~~~L~~lQ~~IL~rAl~lLK 226 (732)
++. ..||.|+++.|+....- -++.- ..+.....+.-+|.++..+ ..|+
T Consensus 89 ~~~-----------------------~~fD~vv~nlpy~~~~~-----~~~~~l~~~~~~~~~~~m~qkEva~r--~vlk 138 (285)
T 1zq9_A 89 TDL-----------------------PFFDTCVANLPYQISSP-----FVFKLLLHRPFFRCAILMFQREFALR--LVAK 138 (285)
T ss_dssp SCC-----------------------CCCSEEEEECCGGGHHH-----HHHHHHHCSSCCSEEEEEEEHHHHHH--HHCC
T ss_pred ccc-----------------------hhhcEEEEecCcccchH-----HHHHHHhcCcchhhhhhhhhHHHHHH--HhcC
Confidence 431 36899999999765321 11110 0011111222345555543 3789
Q ss_pred CCCEEEEEcCCC
Q 004759 227 VGGRIVYSTCSM 238 (732)
Q Consensus 227 pGGrLVYSTCSl 238 (732)
|||++ |+++|+
T Consensus 139 PGg~~-y~~lsv 149 (285)
T 1zq9_A 139 PGDKL-YCRLSI 149 (285)
T ss_dssp TTCTT-CSHHHH
T ss_pred CCCcc-cchhhh
Confidence 99996 888886
No 133
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.79 E-value=5.3e-08 Score=98.42 Aligned_cols=108 Identities=17% Similarity=0.097 Sum_probs=80.4
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
+...++.+|||+|||+|..+..+++.. ...|+++|+++..+..++.++. ..++.+...|+..++.
T Consensus 40 ~~~~~~~~vLD~GcG~G~~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~-- 104 (253)
T 3g5l_A 40 LPDFNQKTVLDLGCGFGWHCIYAAEHG----------AKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAI-- 104 (253)
T ss_dssp CCCCTTCEEEEETCTTCHHHHHHHHTT----------CSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCC--
T ss_pred hhccCCCEEEEECCCCCHHHHHHHHcC----------CCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCC--
Confidence 445688999999999999999887751 2389999999999988877544 5678888888876541
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
....||.|++.- ++...+ ...++|+.+.++|||||+|+.
T Consensus 105 -------------------~~~~fD~v~~~~------~l~~~~----------------~~~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 105 -------------------EPDAYNVVLSSL------ALHYIA----------------SFDDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp -------------------CTTCEEEEEEES------CGGGCS----------------CHHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------CCCCeEEEEEch------hhhhhh----------------hHHHHHHHHHHHcCCCcEEEE
Confidence 126799999832 221111 125689999999999999999
Q ss_pred EcCC
Q 004759 234 STCS 237 (732)
Q Consensus 234 STCS 237 (732)
++.+
T Consensus 144 ~~~~ 147 (253)
T 3g5l_A 144 SVEH 147 (253)
T ss_dssp EEEC
T ss_pred EeCC
Confidence 8543
No 134
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.79 E-value=7e-09 Score=105.37 Aligned_cols=113 Identities=17% Similarity=0.084 Sum_probs=83.1
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
..+|.+|||+|||.|..+..|++. ....|+++|+++..+..++++.++.+ .++.+..+|+..+..
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~----------~~~~v~~id~~~~~~~~a~~~~~~~~-~~~~~~~~~a~~~~~---- 122 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEA----------PIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAP---- 122 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTS----------CEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGG----
T ss_pred ccCCCeEEEECCCccHHHHHHHHh----------CCcEEEEEeCCHHHHHHHHHHHhhCC-CceEEEeehHHhhcc----
Confidence 468999999999999988887653 13589999999999999998877655 457777888765321
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
......||.|+.|+..+..... -......++.++.++|||||+++|.+
T Consensus 123 ---------------~~~~~~FD~i~~D~~~~~~~~~-----------------~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 123 ---------------TLPDGHFDGILYDTYPLSEETW-----------------HTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ---------------GSCTTCEEEEEECCCCCBGGGT-----------------TTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ---------------cccccCCceEEEeeeecccchh-----------------hhcchhhhhhhhhheeCCCCEEEEEe
Confidence 1223679999999753332211 11234568899999999999999853
No 135
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.79 E-value=4.3e-09 Score=104.86 Aligned_cols=118 Identities=15% Similarity=0.083 Sum_probs=89.3
Q ss_pred hhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccC
Q 004759 71 PLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHF 149 (732)
Q Consensus 71 ~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~f 149 (732)
..++...++.+|||+|||+|..+..++..+.. .+.|+++|+++.++..+++++++.+. .++.+...|+..+
T Consensus 62 ~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~--------~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 133 (229)
T 2avd_A 62 ANLARLIQAKKALDLGTFTGYSALALALALPA--------DGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALET 133 (229)
T ss_dssp HHHHHHTTCCEEEEECCTTSHHHHHHHTTSCT--------TCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred HHHHHhcCCCEEEEEcCCccHHHHHHHHhCCC--------CCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHH
Confidence 34456678899999999999999999876531 57999999999999999999999887 5788888887542
Q ss_pred C-CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCC
Q 004759 150 P-GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVG 228 (732)
Q Consensus 150 p-~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpG 228 (732)
. .+. .......||.|++|++. ..+..++..+.++|+||
T Consensus 134 ~~~~~----------------~~~~~~~~D~v~~d~~~-------------------------~~~~~~l~~~~~~L~pg 172 (229)
T 2avd_A 134 LDELL----------------AAGEAGTFDVAVVDADK-------------------------ENCSAYYERCLQLLRPG 172 (229)
T ss_dssp HHHHH----------------HTTCTTCEEEEEECSCS-------------------------TTHHHHHHHHHHHEEEE
T ss_pred HHHHH----------------hcCCCCCccEEEECCCH-------------------------HHHHHHHHHHHHHcCCC
Confidence 1 100 00001579999998761 01245788899999999
Q ss_pred CEEEEEcCC
Q 004759 229 GRIVYSTCS 237 (732)
Q Consensus 229 GrLVYSTCS 237 (732)
|+||...+.
T Consensus 173 G~lv~~~~~ 181 (229)
T 2avd_A 173 GILAVLRVL 181 (229)
T ss_dssp EEEEEECCS
T ss_pred eEEEEECCC
Confidence 999987654
No 136
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.78 E-value=2.9e-08 Score=99.39 Aligned_cols=130 Identities=14% Similarity=0.098 Sum_probs=93.2
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC-CCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC-TANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg-~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
+.+|||+|||+|..+..++. +...|+++|+++..+..++.++...+ ..++.+...|+..++.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~-----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------ 129 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS-----------PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP------ 129 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB-----------TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC------
T ss_pred CCCEEEeCCCCCHHHHHHHh-----------CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC------
Confidence 35999999999999888754 25789999999999999998877643 3568888888876431
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 237 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS 237 (732)
...||.|++-. ++..-+ + ....++|..+.++|||||+|+..+.+
T Consensus 130 ----------------~~~fD~v~~~~------~l~~~~-------~-------~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 130 ----------------TELFDLIFDYV------FFCAIE-------P-------EMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp ----------------SSCEEEEEEES------STTTSC-------G-------GGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ----------------CCCeeEEEECh------hhhcCC-------H-------HHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 14799999732 111111 0 12356889999999999999987665
Q ss_pred CCCc-------CcHHHHHHHHHHCCCcEEEEec
Q 004759 238 MNPV-------ENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 238 lnp~-------ENEaVV~~~L~~~~~~velvd~ 263 (732)
.... -..+-+..+|++.| ++++.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~ 204 (235)
T 3lcc_A 174 ITDHVGGPPYKVDVSTFEEVLVPIG--FKAVSV 204 (235)
T ss_dssp CSCCCSCSSCCCCHHHHHHHHGGGT--EEEEEE
T ss_pred ccccCCCCCccCCHHHHHHHHHHcC--CeEEEE
Confidence 5332 24677888888876 444443
No 137
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.77 E-value=3.4e-08 Score=109.65 Aligned_cols=79 Identities=16% Similarity=0.080 Sum_probs=67.8
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
+.++.+|||+|||+|..+..|+.. ...|+|+|+++..+..+++|++.++.. +.+...|+..++.
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~-----------~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~---- 351 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR-----------GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV---- 351 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC----
T ss_pred cCCCCEEEEeeccchHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc----
Confidence 678999999999999999998764 358999999999999999999998887 8888888876421
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCC
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 189 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGd 189 (732)
..||.|++|+|.+|.
T Consensus 352 -------------------~~fD~Vv~dPPr~g~ 366 (425)
T 2jjq_A 352 -------------------KGFDTVIVDPPRAGL 366 (425)
T ss_dssp -------------------TTCSEEEECCCTTCS
T ss_pred -------------------cCCCEEEEcCCccch
Confidence 269999999997653
No 138
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.77 E-value=1e-07 Score=93.25 Aligned_cols=109 Identities=16% Similarity=0.065 Sum_probs=83.5
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
+..+.++.+|||+|||+|..+..++.. ...|+++|+++..+..++. .+..++.+...|+..+.
T Consensus 41 l~~~~~~~~vLdiG~G~G~~~~~l~~~-----------~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~-- 103 (218)
T 3ou2_A 41 LRAGNIRGDVLELASGTGYWTRHLSGL-----------ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWT-- 103 (218)
T ss_dssp HTTTTSCSEEEEESCTTSHHHHHHHHH-----------SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCC--
T ss_pred HhcCCCCCeEEEECCCCCHHHHHHHhc-----------CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccCC--
Confidence 334778899999999999999999876 2589999999999887766 56678889888876641
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
....||.|++.. ++...++ .....+|..+.++|||||+++
T Consensus 104 --------------------~~~~~D~v~~~~------~l~~~~~--------------~~~~~~l~~~~~~L~pgG~l~ 143 (218)
T 3ou2_A 104 --------------------PDRQWDAVFFAH------WLAHVPD--------------DRFEAFWESVRSAVAPGGVVE 143 (218)
T ss_dssp --------------------CSSCEEEEEEES------CGGGSCH--------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------CCCceeEEEEec------hhhcCCH--------------HHHHHHHHHHHHHcCCCeEEE
Confidence 126799999832 2221111 223678999999999999999
Q ss_pred EEcCCC
Q 004759 233 YSTCSM 238 (732)
Q Consensus 233 YSTCSl 238 (732)
+++.+.
T Consensus 144 ~~~~~~ 149 (218)
T 3ou2_A 144 FVDVTD 149 (218)
T ss_dssp EEEECC
T ss_pred EEeCCC
Confidence 998765
No 139
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.77 E-value=7.3e-09 Score=104.33 Aligned_cols=115 Identities=17% Similarity=0.124 Sum_probs=82.9
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
++++.+|||+|||+|..+..++.. +...|+++|+++..+..+++++++.+ .++.+...|+..+..
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~----------~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~---- 122 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA----------PIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAP---- 122 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS----------CEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGG----
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc----------CCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhc----
Confidence 578999999999999999888542 13589999999999999999887766 678888888766410
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
......||.|++|.-.- . .++ +. ......++.++.++|||||+|++..
T Consensus 123 ---------------~~~~~~fD~V~~d~~~~---~---~~~----~~-------~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 123 ---------------TLPDGHFDGILYDTYPL---S---EET----WH-------THQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ---------------GSCTTCEEEEEECCCCC---B---GGG----TT-------THHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ---------------ccCCCceEEEEECCccc---c---hhh----hh-------hhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 11236799999972110 0 000 00 1223467899999999999999875
Q ss_pred CC
Q 004759 236 CS 237 (732)
Q Consensus 236 CS 237 (732)
++
T Consensus 171 ~~ 172 (236)
T 1zx0_A 171 LT 172 (236)
T ss_dssp HH
T ss_pred cC
Confidence 54
No 140
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.77 E-value=3.4e-08 Score=101.17 Aligned_cols=110 Identities=17% Similarity=0.160 Sum_probs=87.5
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
+.+.++.+|||+|||+|..+..++... |.+.|+++|+++..+..++.++...+.+++.+...|+..++.
T Consensus 33 ~~~~~~~~vLDiG~G~G~~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-- 101 (276)
T 3mgg_A 33 TVYPPGAKVLEAGCGIGAQTVILAKNN---------PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPF-- 101 (276)
T ss_dssp CCCCTTCEEEETTCTTSHHHHHHHHHC---------TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCS--
T ss_pred ccCCCCCeEEEecCCCCHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCC--
Confidence 345789999999999999999998873 357999999999999999999999998899999988876542
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
....||.|++... +..-++ ...+|..+.++|||||+++.
T Consensus 102 -------------------~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 102 -------------------EDSSFDHIFVCFV------LEHLQS----------------PEEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp -------------------CTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------CCCCeeEEEEech------hhhcCC----------------HHHHHHHHHHHcCCCcEEEE
Confidence 1267999998421 211111 13678899999999999998
Q ss_pred Ec
Q 004759 234 ST 235 (732)
Q Consensus 234 ST 235 (732)
.+
T Consensus 141 ~~ 142 (276)
T 3mgg_A 141 IE 142 (276)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 141
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.77 E-value=4.8e-08 Score=98.33 Aligned_cols=130 Identities=12% Similarity=-0.020 Sum_probs=92.3
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
+...++.+|||+|||+|..+..++... ...|+++|+++..+..+++++... .++.+...|+..++.
T Consensus 89 l~~~~~~~vLDiG~G~G~~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~-- 154 (254)
T 1xtp_A 89 LPGHGTSRALDCGAGIGRITKNLLTKL----------YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATL-- 154 (254)
T ss_dssp STTCCCSEEEEETCTTTHHHHHTHHHH----------CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCC--
T ss_pred hcccCCCEEEEECCCcCHHHHHHHHhh----------cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCC--
Confidence 355689999999999999999988764 257999999999999988876544 568888888766431
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
....||.|++.- ++..-++ ....++|.++.++|||||+|+.
T Consensus 155 -------------------~~~~fD~v~~~~------~l~~~~~--------------~~~~~~l~~~~~~LkpgG~l~i 195 (254)
T 1xtp_A 155 -------------------PPNTYDLIVIQW------TAIYLTD--------------ADFVKFFKHCQQALTPNGYIFF 195 (254)
T ss_dssp -------------------CSSCEEEEEEES------CGGGSCH--------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------CCCCeEEEEEcc------hhhhCCH--------------HHHHHHHHHHHHhcCCCeEEEE
Confidence 125799999721 1211110 2346789999999999999999
Q ss_pred EcCCCCC------------cCcHHHHHHHHHHCCC
Q 004759 234 STCSMNP------------VENEAVVAEILRKCEG 256 (732)
Q Consensus 234 STCSlnp------------~ENEaVV~~~L~~~~~ 256 (732)
++..... .-..+-+..+|++.|-
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 230 (254)
T 1xtp_A 196 KENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGV 230 (254)
T ss_dssp EEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTC
T ss_pred EecCCCcccceecccCCcccCCHHHHHHHHHHCCC
Confidence 8742211 1134566777777663
No 142
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.77 E-value=8.2e-09 Score=104.37 Aligned_cols=117 Identities=18% Similarity=0.208 Sum_probs=89.7
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccC-
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHF- 149 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~f- 149 (732)
.++...++.+|||+|||+|..|..++..+.. .+.|+++|+++.++..+++++++.|.. ++.+...|+..+
T Consensus 66 ~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~--------~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l 137 (232)
T 3cbg_A 66 LLISLTGAKQVLEIGVFRGYSALAMALQLPP--------DGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATL 137 (232)
T ss_dssp HHHHHHTCCEEEEECCTTSHHHHHHHTTSCT--------TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHH
T ss_pred HHHHhcCCCEEEEecCCCCHHHHHHHHhCCC--------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 3445567889999999999999999886531 579999999999999999999998875 588888887542
Q ss_pred CCCccCCCCCCCCcccccccccccc--ccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQ--LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKV 227 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~--~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKp 227 (732)
+.+ .... ..||.|++|.++. ....++..++++|+|
T Consensus 138 ~~l------------------~~~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~Lkp 174 (232)
T 3cbg_A 138 EQL------------------TQGKPLPEFDLIFIDADKR-------------------------NYPRYYEIGLNLLRR 174 (232)
T ss_dssp HHH------------------HTSSSCCCEEEEEECSCGG-------------------------GHHHHHHHHHHTEEE
T ss_pred HHH------------------HhcCCCCCcCEEEECCCHH-------------------------HHHHHHHHHHHHcCC
Confidence 111 0011 5799999986510 123578889999999
Q ss_pred CCEEEEEcCCCC
Q 004759 228 GGRIVYSTCSMN 239 (732)
Q Consensus 228 GGrLVYSTCSln 239 (732)
||+||+..+.+.
T Consensus 175 gG~lv~~~~~~~ 186 (232)
T 3cbg_A 175 GGLMVIDNVLWH 186 (232)
T ss_dssp EEEEEEECTTGG
T ss_pred CeEEEEeCCCcC
Confidence 999999887764
No 143
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.76 E-value=6.5e-09 Score=118.73 Aligned_cols=153 Identities=14% Similarity=0.024 Sum_probs=103.4
Q ss_pred ccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCC-CCC--------CCeEEEEEeCCHHHHHH
Q 004759 56 EIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNP-GAL--------PNGMVIANDLDVQRCNL 126 (732)
Q Consensus 56 ~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~-~~~--------p~G~VvAnDid~~Rl~~ 126 (732)
..|.++-...++.+.+.++++.++.+|||.|||+|+....++..+...... ... ....++++|+++..+.+
T Consensus 147 ~~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~l 226 (541)
T 2ar0_A 147 GAGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRL 226 (541)
T ss_dssp ---CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHH
T ss_pred cCCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHH
Confidence 356666555555556677889999999999999999999999887542100 000 01369999999999999
Q ss_pred HHHHHHHcCCCc-----eEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhh
Q 004759 127 LIHQTKRMCTAN-----LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRK 201 (732)
Q Consensus 127 L~~n~kRlg~~n-----i~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ 201 (732)
++.|+...|..+ +.+.++|+...+ ......||.|+++||+++........+
T Consensus 227 A~~nl~l~gi~~~~~~~~~I~~gDtL~~~--------------------~~~~~~fD~Vv~NPPf~~~~~~~~~~~---- 282 (541)
T 2ar0_A 227 ALMNCLLHDIEGNLDHGGAIRLGNTLGSD--------------------GENLPKAHIVATNPPFGSAAGTNITRT---- 282 (541)
T ss_dssp HHHHHHTTTCCCBGGGTBSEEESCTTSHH--------------------HHTSCCEEEEEECCCCTTCSSCCCCSC----
T ss_pred HHHHHHHhCCCccccccCCeEeCCCcccc--------------------cccccCCeEEEECCCcccccchhhHhh----
Confidence 999988777654 556666654311 011257999999999998654321001
Q ss_pred cccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 202 WNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 202 ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
+.. .-...+...+.+++++||+||++++.+.
T Consensus 283 ~~~----~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 283 FVH----PTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp CSS----CCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCC----CCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 111 1112345789999999999999998754
No 144
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.76 E-value=6.1e-08 Score=95.31 Aligned_cols=126 Identities=14% Similarity=0.038 Sum_probs=91.5
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
+-.+.++.+|||+|||+|..+..++.. ...|+++|+++..+..++.++ ++.+...|+..++
T Consensus 38 ~~~~~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~-- 98 (211)
T 3e23_A 38 LGELPAGAKILELGCGAGYQAEAMLAA-----------GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLD-- 98 (211)
T ss_dssp HTTSCTTCEEEESSCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCC--
T ss_pred HHhcCCCCcEEEECCCCCHHHHHHHHc-----------CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCC--
Confidence 335678999999999999999988765 358999999999999888765 3344556665543
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
....||.|++.. ++...+ ......+|..+.++|||||+++
T Consensus 99 --------------------~~~~fD~v~~~~------~l~~~~--------------~~~~~~~l~~~~~~LkpgG~l~ 138 (211)
T 3e23_A 99 --------------------AIDAYDAVWAHA------CLLHVP--------------RDELADVLKLIWRALKPGGLFY 138 (211)
T ss_dssp --------------------CCSCEEEEEECS------CGGGSC--------------HHHHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------CCCcEEEEEecC------chhhcC--------------HHHHHHHHHHHHHhcCCCcEEE
Confidence 126799999832 221111 1234678999999999999999
Q ss_pred EEcCCCCCc-----------CcHHHHHHHHHHCC-Cc
Q 004759 233 YSTCSMNPV-----------ENEAVVAEILRKCE-GS 257 (732)
Q Consensus 233 YSTCSlnp~-----------ENEaVV~~~L~~~~-~~ 257 (732)
.+++..... -+.+-+..+|++.| -.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~ 175 (211)
T 3e23_A 139 ASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWA 175 (211)
T ss_dssp EEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCS
T ss_pred EEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcE
Confidence 987765432 26677888888876 44
No 145
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.75 E-value=1.9e-08 Score=102.56 Aligned_cols=120 Identities=14% Similarity=0.158 Sum_probs=83.9
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHH------cCCCceEEEeccccc-
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR------MCTANLIVTNHEAQH- 148 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kR------lg~~ni~Vt~~Da~~- 148 (732)
..++.+|||+|||.|..+..||... |...|+|+|+++.++..++.+++. .+..|+.+..+|+..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~---------p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~ 114 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF---------PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH 114 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS---------TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC---------CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh
Confidence 3567899999999999999988752 457899999999999999988765 356789999999875
Q ss_pred CCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCC
Q 004759 149 FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVG 228 (732)
Q Consensus 149 fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpG 228 (732)
++.. .....||+|++..| +-|.+-.... .+ -.+..+|..+.++||||
T Consensus 115 l~~~-------------------~~~~~~D~v~~~~~-----------dp~~k~~h~k-rr--~~~~~~l~~~~~~LkpG 161 (235)
T 3ckk_A 115 LPNF-------------------FYKGQLTKMFFLFP-----------DPHFKRTKHK-WR--IISPTLLAEYAYVLRVG 161 (235)
T ss_dssp HHHH-------------------CCTTCEEEEEEESC-----------C--------------CCCHHHHHHHHHHEEEE
T ss_pred hhhh-------------------CCCcCeeEEEEeCC-----------Cchhhhhhhh-hh--hhhHHHHHHHHHHCCCC
Confidence 2210 12367999988544 2222100000 00 12357899999999999
Q ss_pred CEEEEEcCC
Q 004759 229 GRIVYSTCS 237 (732)
Q Consensus 229 GrLVYSTCS 237 (732)
|+|+.+|+.
T Consensus 162 G~l~~~td~ 170 (235)
T 3ckk_A 162 GLVYTITDV 170 (235)
T ss_dssp EEEEEEESC
T ss_pred CEEEEEeCC
Confidence 999998763
No 146
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.75 E-value=6.2e-08 Score=95.90 Aligned_cols=115 Identities=17% Similarity=0.206 Sum_probs=80.7
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHH----HcCCCceEEEeccccc
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTK----RMCTANLIVTNHEAQH 148 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~k----Rlg~~ni~Vt~~Da~~ 148 (732)
.+.++++.+|||+|||+|..+..+++.. |.+.|+|+|+++.++..+..+++ +.+.+++.+..+|+..
T Consensus 22 ~l~~~~~~~vLDiGcG~G~~~~~la~~~---------p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 92 (218)
T 3mq2_A 22 QLRSQYDDVVLDVGTGDGKHPYKVARQN---------PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER 92 (218)
T ss_dssp HHHTTSSEEEEEESCTTCHHHHHHHHHC---------TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT
T ss_pred HhhccCCCEEEEecCCCCHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh
Confidence 3457889999999999999999998862 46899999999998887655543 3566789999999887
Q ss_pred CCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCC
Q 004759 149 FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVG 228 (732)
Q Consensus 149 fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpG 228 (732)
+|.. ... |.|.+..+. ......+- ..+..+|..+.++||||
T Consensus 93 l~~~---------------------~~~-d~v~~~~~~---------~~~~~~~~--------~~~~~~l~~~~~~Lkpg 133 (218)
T 3mq2_A 93 LPPL---------------------SGV-GELHVLMPW---------GSLLRGVL--------GSSPEMLRGMAAVCRPG 133 (218)
T ss_dssp CCSC---------------------CCE-EEEEEESCC---------HHHHHHHH--------TSSSHHHHHHHHTEEEE
T ss_pred CCCC---------------------CCC-CEEEEEccc---------hhhhhhhh--------ccHHHHHHHHHHHcCCC
Confidence 6521 123 666543330 00000000 11256889999999999
Q ss_pred CEEEEEc
Q 004759 229 GRIVYST 235 (732)
Q Consensus 229 GrLVYST 235 (732)
|+++++.
T Consensus 134 G~l~~~~ 140 (218)
T 3mq2_A 134 ASFLVAL 140 (218)
T ss_dssp EEEEEEE
T ss_pred cEEEEEe
Confidence 9999853
No 147
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.74 E-value=2.8e-08 Score=98.45 Aligned_cols=115 Identities=10% Similarity=0.006 Sum_probs=81.8
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHH------------cCCCceEE
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR------------MCTANLIV 141 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kR------------lg~~ni~V 141 (732)
+.+.++.+|||++||+|..+..|++. ...|+|+|+|+.++..++++... ....++.+
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~-----------g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~ 86 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQ-----------GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEI 86 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHH-----------CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEE
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHC-----------CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEE
Confidence 35678999999999999999999875 25899999999999988876532 12356788
Q ss_pred EecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHH
Q 004759 142 TNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRG 221 (732)
Q Consensus 142 t~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rA 221 (732)
..+|+..++.. ....||.|++-. .+..-+ .....+.+.+.
T Consensus 87 ~~~d~~~l~~~--------------------~~~~fD~v~~~~------~l~~l~--------------~~~~~~~l~~~ 126 (203)
T 1pjz_A 87 WCGDFFALTAR--------------------DIGHCAAFYDRA------AMIALP--------------ADMRERYVQHL 126 (203)
T ss_dssp EEECCSSSTHH--------------------HHHSEEEEEEES------CGGGSC--------------HHHHHHHHHHH
T ss_pred EECccccCCcc--------------------cCCCEEEEEECc------chhhCC--------------HHHHHHHHHHH
Confidence 88887765420 015799999621 111111 12335678999
Q ss_pred HhhccCCCEEEEEcCCCC
Q 004759 222 ISLLKVGGRIVYSTCSMN 239 (732)
Q Consensus 222 l~lLKpGGrLVYSTCSln 239 (732)
.++|||||++++.|+.+.
T Consensus 127 ~r~LkpgG~~~l~~~~~~ 144 (203)
T 1pjz_A 127 EALMPQACSGLLITLEYD 144 (203)
T ss_dssp HHHSCSEEEEEEEEESSC
T ss_pred HHHcCCCcEEEEEEEecC
Confidence 999999999777766653
No 148
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.74 E-value=6e-08 Score=101.80 Aligned_cols=114 Identities=16% Similarity=0.121 Sum_probs=88.3
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPG 151 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~ 151 (732)
.+++.++.+|||+|||+|..+..+++..+ ..|+++|+++..+..+++++...+.. ++.+...|+..+|
T Consensus 85 ~~~~~~~~~vLDiGcG~G~~~~~la~~~~----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 153 (318)
T 2fk8_A 85 KLDLKPGMTLLDIGCGWGTTMRRAVERFD----------VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA- 153 (318)
T ss_dssp TSCCCTTCEEEEESCTTSHHHHHHHHHHC----------CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-
T ss_pred hcCCCCcCEEEEEcccchHHHHHHHHHCC----------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-
Confidence 45678999999999999999999988752 48999999999999999999888764 5888888765532
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
..||.|++.- ++..-++ .....+|..+.++|||||++
T Consensus 154 -----------------------~~fD~v~~~~------~l~~~~~--------------~~~~~~l~~~~~~LkpgG~l 190 (318)
T 2fk8_A 154 -----------------------EPVDRIVSIE------AFEHFGH--------------ENYDDFFKRCFNIMPADGRM 190 (318)
T ss_dssp -----------------------CCCSEEEEES------CGGGTCG--------------GGHHHHHHHHHHHSCTTCEE
T ss_pred -----------------------CCcCEEEEeC------hHHhcCH--------------HHHHHHHHHHHHhcCCCcEE
Confidence 5699999742 2211110 12356889999999999999
Q ss_pred EEEcCCCCC
Q 004759 232 VYSTCSMNP 240 (732)
Q Consensus 232 VYSTCSlnp 240 (732)
+.++.....
T Consensus 191 ~~~~~~~~~ 199 (318)
T 2fk8_A 191 TVQSSVSYH 199 (318)
T ss_dssp EEEEEECCC
T ss_pred EEEEeccCC
Confidence 998877643
No 149
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.74 E-value=5.3e-08 Score=96.01 Aligned_cols=108 Identities=16% Similarity=0.148 Sum_probs=80.5
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
.+.++.+|||+|||+|..+..++.. ...|+++|+++..+..+++++. .++.+...|+..++.
T Consensus 42 ~~~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~--- 103 (220)
T 3hnr_A 42 VNKSFGNVLEFGVGTGNLTNKLLLA-----------GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEV--- 103 (220)
T ss_dssp HHTCCSEEEEECCTTSHHHHHHHHT-----------TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCC---
T ss_pred hccCCCeEEEeCCCCCHHHHHHHhC-----------CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCC---
Confidence 3458999999999999999988775 3689999999999988877543 567778888766431
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
. ..||.|++.. ++..-++ ..+..+|..+.++|||||+++.+
T Consensus 104 ------------------~-~~fD~v~~~~------~l~~~~~--------------~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 104 ------------------P-TSIDTIVSTY------AFHHLTD--------------DEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp ------------------C-SCCSEEEEES------CGGGSCH--------------HHHHHHHHHHHHHSCTTCEEEEE
T ss_pred ------------------C-CCeEEEEECc------chhcCCh--------------HHHHHHHHHHHHhcCCCCEEEEE
Confidence 1 6799999842 2221111 12246899999999999999998
Q ss_pred cCCCC
Q 004759 235 TCSMN 239 (732)
Q Consensus 235 TCSln 239 (732)
+....
T Consensus 145 ~~~~~ 149 (220)
T 3hnr_A 145 DTIFA 149 (220)
T ss_dssp EECBS
T ss_pred ecccc
Confidence 75543
No 150
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.73 E-value=6.1e-08 Score=97.55 Aligned_cols=131 Identities=17% Similarity=0.015 Sum_probs=94.1
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
..++.+|||+|||+|..+..++... .+.|+++|+++..+..+++++...+..++.+...|+..++.
T Consensus 77 ~~~~~~vLDiGcG~G~~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---- 142 (241)
T 2ex4_A 77 KTGTSCALDCGAGIGRITKRLLLPL----------FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP---- 142 (241)
T ss_dssp CCCCSEEEEETCTTTHHHHHTTTTT----------CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC----
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc----------CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC----
Confidence 4578999999999999988876642 35899999999999999988776654567788888766431
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
....||.|+++. ++...++ .....+|..+.++|||||+|+.++
T Consensus 143 -----------------~~~~fD~v~~~~------~l~~~~~--------------~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 143 -----------------EPDSYDVIWIQW------VIGHLTD--------------QHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp -----------------CSSCEEEEEEES------CGGGSCH--------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------CCCCEEEEEEcc------hhhhCCH--------------HHHHHHHHHHHHhcCCCeEEEEEE
Confidence 125799999852 2211111 123578999999999999999976
Q ss_pred CCCCC-----------cCcHHHHHHHHHHCCCc
Q 004759 236 CSMNP-----------VENEAVVAEILRKCEGS 257 (732)
Q Consensus 236 CSlnp-----------~ENEaVV~~~L~~~~~~ 257 (732)
..... .-+..-+..+|++.|-.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 218 (241)
T 2ex4_A 186 NMAQEGVILDDVDSSVCRDLDVVRRIICSAGLS 218 (241)
T ss_dssp EEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCC
T ss_pred ccCCCcceecccCCcccCCHHHHHHHHHHcCCe
Confidence 43221 11566778888887643
No 151
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.73 E-value=2.7e-08 Score=106.63 Aligned_cols=120 Identities=14% Similarity=0.093 Sum_probs=90.6
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCC
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPG 151 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~ 151 (732)
..+.+.++.+|||+|||+|..+..++... +.+.|+++|+++..+..+++++...+.. +.+...|+..++
T Consensus 190 ~~l~~~~~~~VLDlGcG~G~~~~~la~~~---------~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~~- 258 (343)
T 2pjd_A 190 STLTPHTKGKVLDVGCGAGVLSVAFARHS---------PKIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSEV- 258 (343)
T ss_dssp HHSCTTCCSBCCBTTCTTSHHHHHHHHHC---------TTCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTC-
T ss_pred HhcCcCCCCeEEEecCccCHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEccccccc-
Confidence 34556678899999999999999998762 3468999999999999999999887764 455566654321
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
...||.|++++|.. .|.. .-.....+++..+.++|||||++
T Consensus 259 ----------------------~~~fD~Iv~~~~~~-~g~~----------------~~~~~~~~~l~~~~~~LkpgG~l 299 (343)
T 2pjd_A 259 ----------------------KGRFDMIISNPPFH-DGMQ----------------TSLDAAQTLIRGAVRHLNSGGEL 299 (343)
T ss_dssp ----------------------CSCEEEEEECCCCC-SSSH----------------HHHHHHHHHHHHHGGGEEEEEEE
T ss_pred ----------------------cCCeeEEEECCCcc-cCcc----------------CCHHHHHHHHHHHHHhCCCCcEE
Confidence 25799999998843 1210 01123567899999999999999
Q ss_pred EEEcCCCCCc
Q 004759 232 VYSTCSMNPV 241 (732)
Q Consensus 232 VYSTCSlnp~ 241 (732)
+..+.+..+.
T Consensus 300 ~i~~~~~~~~ 309 (343)
T 2pjd_A 300 RIVANAFLPY 309 (343)
T ss_dssp EEEEETTSSH
T ss_pred EEEEcCCCCc
Confidence 9998887653
No 152
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.73 E-value=7e-08 Score=99.25 Aligned_cols=115 Identities=12% Similarity=0.030 Sum_probs=86.4
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~~~ 154 (732)
+.++.+|||+|||+|..+..++.. +.+.|+++|+++..+..+++++...+. .++.+...|+..++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-- 129 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA----------GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD-- 129 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH----------TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC--
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC--
Confidence 468899999999999999987764 135899999999999999999887776 4688888887764310
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
....||.|++... +.. ...-.....++|..+.++|||||+|+.+
T Consensus 130 ------------------~~~~fD~v~~~~~------l~~------------~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 130 ------------------LGKEFDVISSQFS------FHY------------AFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp ------------------CSSCEEEEEEESC------GGG------------GGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ------------------CCCCcCEEEECch------hhh------------hcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1267999998521 100 0001233567899999999999999999
Q ss_pred cCCC
Q 004759 235 TCSM 238 (732)
Q Consensus 235 TCSl 238 (732)
+++.
T Consensus 174 ~~~~ 177 (298)
T 1ri5_A 174 VPSR 177 (298)
T ss_dssp EECH
T ss_pred ECCH
Confidence 8664
No 153
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.72 E-value=4.4e-08 Score=111.88 Aligned_cols=180 Identities=14% Similarity=0.114 Sum_probs=117.6
Q ss_pred ccCcEEEccccccchhhhcC----CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHH
Q 004759 56 EIGNITRQEAVSMVPPLFLD----VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQT 131 (732)
Q Consensus 56 ~~G~i~~Qd~~Smlp~llLd----~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~ 131 (732)
+.|.++--..++.+.+.++. ++++.+|||.|||+|+....++..+... +...++|+|+++..+.+++.|+
T Consensus 195 ~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~------~~~~i~G~Eid~~~~~lA~~Nl 268 (542)
T 3lkd_A 195 KAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQP------QTVVYFGQELNTSTYNLARMNM 268 (542)
T ss_dssp CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCT------TTCEEEEEESCHHHHHHHHHHH
T ss_pred cCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhc------cCceEEEEECcHHHHHHHHHHH
Confidence 46777665555555556665 6789999999999999999998876421 2468999999999999999999
Q ss_pred HHcCC--CceEEEecccccC--CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccC--hh-hhhhccc
Q 004759 132 KRMCT--ANLIVTNHEAQHF--PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKA--PD-IWRKWNV 204 (732)
Q Consensus 132 kRlg~--~ni~Vt~~Da~~f--p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~--pd-~w~~ws~ 204 (732)
...|. .++.+.++|+... |. .....||.|+++||.++....... .+ .|..+.
T Consensus 269 ~l~gi~~~~~~I~~gDtL~~d~p~--------------------~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G- 327 (542)
T 3lkd_A 269 ILHGVPIENQFLHNADTLDEDWPT--------------------QEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFG- 327 (542)
T ss_dssp HHTTCCGGGEEEEESCTTTSCSCC--------------------SSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGS-
T ss_pred HHcCCCcCccceEecceecccccc--------------------cccccccEEEecCCcCCccccchhhhhhhhhhhhh-
Confidence 88887 4677888886543 21 113679999999999864321110 01 122111
Q ss_pred ccccchHHHHHHHHHHHHhhcc-CCCEEEEEcCC--CCCcCcHHHHHHHHHHCCCcEEEEec
Q 004759 205 GLGNGLHSLQVQIAMRGISLLK-VGGRIVYSTCS--MNPVENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 205 ~~~~~L~~lQ~~IL~rAl~lLK-pGGrLVYSTCS--lnp~ENEaVV~~~L~~~~~~velvd~ 263 (732)
....-...+...+.+++++|+ +||++++.+-. +.-.-.+.-+.+.|-+...-..++.+
T Consensus 328 -~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~~l~~II~L 388 (542)
T 3lkd_A 328 -KLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEGAIDTVIGL 388 (542)
T ss_dssp -SCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTTCEEEEEEC
T ss_pred -hcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhCCceeEEEEc
Confidence 011111223468999999999 99999776433 22112255566666554322234543
No 154
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.71 E-value=9.2e-08 Score=94.41 Aligned_cols=109 Identities=17% Similarity=0.111 Sum_probs=83.0
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..++.. ...|+++|+++..+..++++++..+ .++.+...|+..++.
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~----- 99 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDY-----------GFEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSF----- 99 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCS-----
T ss_pred CCCCeEEEEeccCCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCC-----
Confidence 45889999999999999887764 1389999999999999999988777 678888888766431
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
....||.|++..+.. + +. .....++|.++.++|||||+++.+++
T Consensus 100 ----------------~~~~~D~v~~~~~~~----~---------~~-------~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 100 ----------------EDKTFDYVIFIDSIV----H---------FE-------PLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp ----------------CTTCEEEEEEESCGG----G---------CC-------HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----------------CCCcEEEEEEcCchH----h---------CC-------HHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 125799999864300 0 00 01235689999999999999999877
Q ss_pred CC
Q 004759 237 SM 238 (732)
Q Consensus 237 Sl 238 (732)
..
T Consensus 144 ~~ 145 (227)
T 1ve3_A 144 DL 145 (227)
T ss_dssp CH
T ss_pred Ch
Confidence 53
No 155
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.70 E-value=1.5e-08 Score=107.27 Aligned_cols=123 Identities=14% Similarity=0.103 Sum_probs=81.0
Q ss_pred hcCCCCCCEEEeecC------CCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEE-Eecc
Q 004759 73 FLDVQPDHFVLDMCA------APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIV-TNHE 145 (732)
Q Consensus 73 lLd~~pg~~VLDmCA------APGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~V-t~~D 145 (732)
.+.+++|++|||+|| |||+ ..+++.++ +.+.|+|+|+++. ..++.+ ..+|
T Consensus 58 ~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~--------~~~~V~gvDis~~-------------v~~v~~~i~gD 114 (290)
T 2xyq_A 58 TLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLP--------TGTLLVDSDLNDF-------------VSDADSTLIGD 114 (290)
T ss_dssp CCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSC--------TTCEEEEEESSCC-------------BCSSSEEEESC
T ss_pred hcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcC--------CCCEEEEEECCCC-------------CCCCEEEEECc
Confidence 456789999999999 7788 44455543 2589999999988 135667 7888
Q ss_pred cccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhc
Q 004759 146 AQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLL 225 (732)
Q Consensus 146 a~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lL 225 (732)
+..++. ...||+|++|+++...|... .... ....+..++|..+.++|
T Consensus 115 ~~~~~~----------------------~~~fD~Vvsn~~~~~~g~~~----------~d~~-~~~~l~~~~l~~a~r~L 161 (290)
T 2xyq_A 115 CATVHT----------------------ANKWDLIISDMYDPRTKHVT----------KEND-SKEGFFTYLCGFIKQKL 161 (290)
T ss_dssp GGGCCC----------------------SSCEEEEEECCCCCC---CC----------SCCC-CCCTHHHHHHHHHHHHE
T ss_pred cccCCc----------------------cCcccEEEEcCCcccccccc----------cccc-chHHHHHHHHHHHHHhc
Confidence 765431 15699999998766555321 1111 11234468999999999
Q ss_pred cCCCEEEEEcCCCCCcCcHHHHHHHHHHC
Q 004759 226 KVGGRIVYSTCSMNPVENEAVVAEILRKC 254 (732)
Q Consensus 226 KpGGrLVYSTCSlnp~ENEaVV~~~L~~~ 254 (732)
||||+++...-.. ...+ -+.++|+++
T Consensus 162 kpGG~~v~~~~~~--~~~~-~l~~~l~~~ 187 (290)
T 2xyq_A 162 ALGGSIAVKITEH--SWNA-DLYKLMGHF 187 (290)
T ss_dssp EEEEEEEEEECSS--SCCH-HHHHHHTTE
T ss_pred CCCcEEEEEEecc--CCHH-HHHHHHHHc
Confidence 9999999864332 2233 445566654
No 156
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.70 E-value=6e-08 Score=97.91 Aligned_cols=106 Identities=12% Similarity=0.102 Sum_probs=80.9
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
+.+.++.+|||+|||+|..+..++.... .+.|+++|+++..+..++++ .+++.+...|+..++
T Consensus 29 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~---------~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~--- 91 (259)
T 2p35_A 29 VPLERVLNGYDLGCGPGNSTELLTDRYG---------VNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK--- 91 (259)
T ss_dssp CCCSCCSSEEEETCTTTHHHHHHHHHHC---------TTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC---
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHhCC---------CCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC---
Confidence 3567889999999999999999988752 46899999999999888775 356788888876643
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
....||.|++... +...+ ....+|..+.++|||||+|+.
T Consensus 92 -------------------~~~~fD~v~~~~~------l~~~~----------------~~~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 92 -------------------PAQKADLLYANAV------FQWVP----------------DHLAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp -------------------CSSCEEEEEEESC------GGGST----------------THHHHHHHHGGGEEEEEEEEE
T ss_pred -------------------ccCCcCEEEEeCc------hhhCC----------------CHHHHHHHHHHhcCCCeEEEE
Confidence 1267999998321 11111 134688999999999999999
Q ss_pred EcCC
Q 004759 234 STCS 237 (732)
Q Consensus 234 STCS 237 (732)
++..
T Consensus 131 ~~~~ 134 (259)
T 2p35_A 131 QMPD 134 (259)
T ss_dssp EEEC
T ss_pred EeCC
Confidence 8754
No 157
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.69 E-value=1.7e-08 Score=104.65 Aligned_cols=112 Identities=12% Similarity=0.094 Sum_probs=86.5
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
++.+.++.+|||+|||+|..+..+++.+.. ...|+++|+++..+..+++++...+. ++.+...|+..++.
T Consensus 17 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~--------~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~- 86 (284)
T 3gu3_A 17 VWKITKPVHIVDYGCGYGYLGLVLMPLLPE--------GSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIEL- 86 (284)
T ss_dssp TSCCCSCCEEEEETCTTTHHHHHHTTTSCT--------TCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCC-
T ss_pred HhccCCCCeEEEecCCCCHHHHHHHHhCCC--------CCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCc-
Confidence 346678999999999999999998776421 37999999999999999998877665 78888888876441
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
...||.|++... +..-++ ..++|.++.++|||||+++
T Consensus 87 ---------------------~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~LkpgG~l~ 123 (284)
T 3gu3_A 87 ---------------------NDKYDIAICHAF------LLHMTT----------------PETMLQKMIHSVKKGGKII 123 (284)
T ss_dssp ---------------------SSCEEEEEEESC------GGGCSS----------------HHHHHHHHHHTEEEEEEEE
T ss_pred ---------------------CCCeeEEEECCh------hhcCCC----------------HHHHHHHHHHHcCCCCEEE
Confidence 157999998431 211111 1368999999999999999
Q ss_pred EEcCC
Q 004759 233 YSTCS 237 (732)
Q Consensus 233 YSTCS 237 (732)
.....
T Consensus 124 ~~~~~ 128 (284)
T 3gu3_A 124 CFEPH 128 (284)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 87766
No 158
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.69 E-value=5.6e-08 Score=95.09 Aligned_cols=121 Identities=10% Similarity=0.012 Sum_probs=86.9
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
.+.++.+|||+|||+|..+..++.. + .+.|+++|+++..+..+++++. ++.+...|+..++
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~-~---------~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~---- 108 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL-G---------AESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS---- 108 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT-T---------BSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC----
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc-C---------CCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC----
Confidence 4567899999999999999988764 2 3589999999999999888765 5777888776532
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
..||.|++|+|... +.. ....+++.++++.+ |+ +|+
T Consensus 109 --------------------~~~D~v~~~~p~~~-------------~~~-------~~~~~~l~~~~~~~--g~--~~~ 144 (200)
T 1ne2_A 109 --------------------GKYDTWIMNPPFGS-------------VVK-------HSDRAFIDKAFETS--MW--IYS 144 (200)
T ss_dssp --------------------CCEEEEEECCCC---------------------------CHHHHHHHHHHE--EE--EEE
T ss_pred --------------------CCeeEEEECCCchh-------------ccC-------chhHHHHHHHHHhc--Cc--EEE
Confidence 46999999998321 110 11235688888887 33 777
Q ss_pred cCCCCCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 235 TCSMNPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 235 TCSlnp~ENEaVV~~~L~~~~~~velvd 262 (732)
.|.- ...+.+..+++..+ .++.+.
T Consensus 145 ~~~~---~~~~~~~~~~~~~g-~~~~~~ 168 (200)
T 1ne2_A 145 IGNA---KARDFLRREFSARG-DVFREE 168 (200)
T ss_dssp EEEG---GGHHHHHHHHHHHE-EEEEEE
T ss_pred EEcC---chHHHHHHHHHHCC-CEEEEE
Confidence 7743 45667777888776 666654
No 159
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.69 E-value=3.9e-08 Score=95.95 Aligned_cols=122 Identities=16% Similarity=0.121 Sum_probs=84.9
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..++.. + ...|+++|+++..+..+++++.. .+++.+...|+..++.
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~-~---------~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~----- 103 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLG-G---------FPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDF----- 103 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHT-T---------CCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCS-----
T ss_pred CCCCeEEEECCCCcHHHHHHHHc-C---------CCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCC-----
Confidence 67899999999999999988765 1 13799999999999998887653 3577888888766431
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
....||.|++..+.... ....+.. |... ..-.....++|..+.++|||||+++.+++
T Consensus 104 ----------------~~~~fD~v~~~~~~~~~--~~~~~~~---~~~~--~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 104 ----------------PSASFDVVLEKGTLDAL--LAGERDP---WTVS--SEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp ----------------CSSCEEEEEEESHHHHH--TTTCSCT---TSCC--HHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ----------------CCCcccEEEECcchhhh--ccccccc---cccc--cchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 12579999986542110 0000111 2211 01123457899999999999999999887
Q ss_pred CC
Q 004759 237 SM 238 (732)
Q Consensus 237 Sl 238 (732)
+.
T Consensus 161 ~~ 162 (215)
T 2pxx_A 161 AA 162 (215)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 160
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.69 E-value=6.4e-08 Score=99.91 Aligned_cols=107 Identities=15% Similarity=0.064 Sum_probs=83.2
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
+...++.+|||+|||+|..+..++.. ...|+|+|+++..+..++.++.+.+. ++.+...|+..++.
T Consensus 116 ~~~~~~~~vLD~GcG~G~~~~~l~~~-----------g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~-- 181 (286)
T 3m70_A 116 AKIISPCKVLDLGCGQGRNSLYLSLL-----------GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI-- 181 (286)
T ss_dssp HHHSCSCEEEEESCTTCHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC--
T ss_pred hhccCCCcEEEECCCCCHHHHHHHHC-----------CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc--
Confidence 34458999999999999999998775 25899999999999999999998887 88888888776431
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
...||.|++..+ +..-+ ......+|.++.++|||||+++.
T Consensus 182 --------------------~~~fD~i~~~~~------~~~~~--------------~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 182 --------------------QENYDFIVSTVV------FMFLN--------------RERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp --------------------CSCEEEEEECSS------GGGSC--------------GGGHHHHHHHHHHTEEEEEEEEE
T ss_pred --------------------cCCccEEEEccc------hhhCC--------------HHHHHHHHHHHHHhcCCCcEEEE
Confidence 267999998543 11100 01235689999999999999776
Q ss_pred E
Q 004759 234 S 234 (732)
Q Consensus 234 S 234 (732)
.
T Consensus 222 ~ 222 (286)
T 3m70_A 222 V 222 (286)
T ss_dssp E
T ss_pred E
Confidence 4
No 161
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.69 E-value=1.8e-08 Score=97.04 Aligned_cols=120 Identities=19% Similarity=0.125 Sum_probs=83.2
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..++.. . .|+|+|+++..+.. ..++.+...|+....
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~-----------~-~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~------ 74 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR-----------N-TVVSTDLNIRALES---------HRGGNLVRADLLCSI------ 74 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT-----------S-EEEEEESCHHHHHT---------CSSSCEEECSTTTTB------
T ss_pred CCCCeEEEeccCccHHHHHHHhc-----------C-cEEEEECCHHHHhc---------ccCCeEEECChhhhc------
Confidence 56789999999999998888653 2 89999999999876 356777778775511
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
....||.|++++|....... .. |.... ....++.+.++.| |||+++.++.
T Consensus 75 ----------------~~~~fD~i~~n~~~~~~~~~----~~---~~~~~------~~~~~~~~~~~~l-pgG~l~~~~~ 124 (170)
T 3q87_B 75 ----------------NQESVDVVVFNPPYVPDTDD----PI---IGGGY------LGREVIDRFVDAV-TVGMLYLLVI 124 (170)
T ss_dssp ----------------CGGGCSEEEECCCCBTTCCC----TT---TBCCG------GGCHHHHHHHHHC-CSSEEEEEEE
T ss_pred ----------------ccCCCCEEEECCCCccCCcc----cc---ccCCc------chHHHHHHHHhhC-CCCEEEEEEe
Confidence 12679999999884432211 00 11110 1124567777777 9999999876
Q ss_pred CCCCcCcHHHHHHHHHHCCC
Q 004759 237 SMNPVENEAVVAEILRKCEG 256 (732)
Q Consensus 237 Slnp~ENEaVV~~~L~~~~~ 256 (732)
+. ....-+.++|++.+-
T Consensus 125 ~~---~~~~~l~~~l~~~gf 141 (170)
T 3q87_B 125 EA---NRPKEVLARLEERGY 141 (170)
T ss_dssp GG---GCHHHHHHHHHHTTC
T ss_pred cC---CCHHHHHHHHHHCCC
Confidence 65 566677888888764
No 162
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.68 E-value=7.8e-08 Score=93.89 Aligned_cols=112 Identities=12% Similarity=0.016 Sum_probs=82.7
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
...++.+|||+|||+|..++.++.. +...|+++|+++..+..+++++...+ .++.+...|+..++.
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~--- 85 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVE----------DGYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLPF--- 85 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHH----------TTCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCCS---
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHh----------CCCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCCC---
Confidence 3467899999999999986655533 13689999999999999999988766 457777777766431
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
....||.|++.. ++..-+ .....+++.++.++|||||+++.+
T Consensus 86 ------------------~~~~fD~v~~~~------~l~~~~--------------~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 86 ------------------KDESMSFVYSYG------TIFHMR--------------KNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp ------------------CTTCEEEEEECS------CGGGSC--------------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------------------CCCceeEEEEcC------hHHhCC--------------HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 125799999731 111110 123467899999999999999999
Q ss_pred cCCC
Q 004759 235 TCSM 238 (732)
Q Consensus 235 TCSl 238 (732)
+++.
T Consensus 128 ~~~~ 131 (209)
T 2p8j_A 128 FLTT 131 (209)
T ss_dssp EEET
T ss_pred Eecc
Confidence 8875
No 163
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.67 E-value=1.1e-07 Score=94.93 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=79.9
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
+.++.+|||+|||+|..+..++.. ...|+++|+++..+..+..+. ...++.+...|+..++.
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~---- 112 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT-----------GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPF---- 112 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSS----
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc-----------CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCC----
Confidence 568899999999999999988775 358999999999998876653 34678888888776541
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
....||.|++. +++.+.++ ..++|..+.++|||||+++.++
T Consensus 113 -----------------~~~~fD~v~~~------~~l~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 113 -----------------ENEQFEAIMAI------NSLEWTEE----------------PLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp -----------------CTTCEEEEEEE------SCTTSSSC----------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------CCCCccEEEEc------ChHhhccC----------------HHHHHHHHHHHhCCCeEEEEEE
Confidence 12679999973 22221111 2467899999999999999987
Q ss_pred CCC
Q 004759 236 CSM 238 (732)
Q Consensus 236 CSl 238 (732)
...
T Consensus 154 ~~~ 156 (242)
T 3l8d_A 154 LGP 156 (242)
T ss_dssp ECT
T ss_pred cCC
Confidence 544
No 164
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.67 E-value=2.9e-07 Score=88.00 Aligned_cols=128 Identities=14% Similarity=-0.003 Sum_probs=90.0
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
+.++.+|||+|||+|..+..++.. ...|+++|+++..+..+++++ +++.+...|+..++.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-----------~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~---- 103 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-----------GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQI---- 103 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCC----
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-----------CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCC----
Confidence 468999999999999999988775 258999999999998887754 346777777665431
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
....||.|++.+++-. .. . ......+|..+.++|+|||+++.++
T Consensus 104 -----------------~~~~~D~i~~~~~~~~-----~~-------~-------~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 104 -----------------SETDFDLIVSAGNVMG-----FL-------A-------EDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp -----------------CCCCEEEEEECCCCGG-----GS-------C-------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------CCCceeEEEECCcHHh-----hc-------C-------hHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 1257999998533111 00 0 1234678999999999999999886
Q ss_pred CCCCCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 236 CSMNPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 236 CSlnp~ENEaVV~~~L~~~~~~velvd 262 (732)
.+... -...-+..+|++.| ++++.
T Consensus 148 ~~~~~-~~~~~~~~~l~~~G--f~~~~ 171 (195)
T 3cgg_A 148 GAGRG-WVFGDFLEVAERVG--LELEN 171 (195)
T ss_dssp ETTSS-CCHHHHHHHHHHHT--EEEEE
T ss_pred CCCCC-cCHHHHHHHHHHcC--CEEee
Confidence 55432 34555667777665 44444
No 165
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.66 E-value=8.3e-08 Score=99.98 Aligned_cols=115 Identities=14% Similarity=0.175 Sum_probs=86.3
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc--CCCceEEEecccccCCCCcc
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM--CTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl--g~~ni~Vt~~Da~~fp~~~~ 154 (732)
.++.+|||+|||+|..+..+++.+. +...|+|+|+++..+..++++++.. +..++.+...|+..++...
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~--------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~- 105 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELK--------PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLG- 105 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSS--------CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGC-
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC--------CCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccc-
Confidence 5799999999999999999988652 2579999999999999999998886 3568999999987754210
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
+.......||.|++... +. | + ...++|..+.++|||||+|+..
T Consensus 106 --------------~~~~~~~~fD~V~~~~~------l~--------~-------~--~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 106 --------------ADSVDKQKIDMITAVEC------AH--------W-------F--DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp --------------TTTTTSSCEEEEEEESC------GG--------G-------S--CHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------------cccccCCCeeEEeHhhH------HH--------H-------h--CHHHHHHHHHHhcCCCcEEEEE
Confidence 00011267999998321 10 1 1 2346889999999999999986
Q ss_pred cCC
Q 004759 235 TCS 237 (732)
Q Consensus 235 TCS 237 (732)
+++
T Consensus 149 ~~~ 151 (299)
T 3g5t_A 149 GYA 151 (299)
T ss_dssp EEE
T ss_pred ecC
Confidence 554
No 166
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.66 E-value=6.3e-08 Score=97.76 Aligned_cols=106 Identities=16% Similarity=0.163 Sum_probs=80.9
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
..+.++.+|||+|||+|..+..++.. .+.|+++|+++..+..+++++ ..+.+++.+...|+..++.
T Consensus 35 ~~~~~~~~vLDiG~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~-- 100 (263)
T 2yqz_A 35 HPKGEEPVFLELGVGTGRIALPLIAR-----------GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPL-- 100 (263)
T ss_dssp CCSSSCCEEEEETCTTSTTHHHHHTT-----------TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCS--
T ss_pred cCCCCCCEEEEeCCcCCHHHHHHHHC-----------CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCC--
Confidence 35678999999999999999988764 368999999999999998877 3445688888888876441
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
....||.|++.. .+...+ ...++|..+.++|||||+++.
T Consensus 101 -------------------~~~~fD~v~~~~------~l~~~~----------------~~~~~l~~~~~~L~pgG~l~~ 139 (263)
T 2yqz_A 101 -------------------PDESVHGVIVVH------LWHLVP----------------DWPKVLAEAIRVLKPGGALLE 139 (263)
T ss_dssp -------------------CTTCEEEEEEES------CGGGCT----------------THHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------CCCCeeEEEECC------chhhcC----------------CHHHHHHHHHHHCCCCcEEEE
Confidence 126799999832 111111 124688999999999999998
Q ss_pred E
Q 004759 234 S 234 (732)
Q Consensus 234 S 234 (732)
+
T Consensus 140 ~ 140 (263)
T 2yqz_A 140 G 140 (263)
T ss_dssp E
T ss_pred E
Confidence 7
No 167
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.66 E-value=4.5e-08 Score=102.56 Aligned_cols=116 Identities=16% Similarity=0.094 Sum_probs=88.3
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~Vt~~Da~~fp~~ 152 (732)
..+.++.+|||+|||+|..+..++... .+.+.|+++|+++..+..++.++.+.+..+ +.+..+|+..++.
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~--------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 184 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSA--------CPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT- 184 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTT--------CTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC-
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhc--------CCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc-
Confidence 456889999999999999988875322 246799999999999999999998888764 8899998877541
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
. ..||.|++..+ +...|+ ...+.+++..+.++|||||+|+
T Consensus 185 --------------------~-~~fD~v~~~~~------~~~~~~-------------~~~~~~~l~~~~~~LkpgG~l~ 224 (305)
T 3ocj_A 185 --------------------R-EGYDLLTSNGL------NIYEPD-------------DARVTELYRRFWQALKPGGALV 224 (305)
T ss_dssp --------------------C-SCEEEEECCSS------GGGCCC-------------HHHHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------c-CCeEEEEECCh------hhhcCC-------------HHHHHHHHHHHHHhcCCCeEEE
Confidence 1 67999997432 211111 1233468999999999999999
Q ss_pred EEcCCC
Q 004759 233 YSTCSM 238 (732)
Q Consensus 233 YSTCSl 238 (732)
.++.+.
T Consensus 225 i~~~~~ 230 (305)
T 3ocj_A 225 TSFLTP 230 (305)
T ss_dssp EECCCC
T ss_pred EEecCC
Confidence 976554
No 168
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.65 E-value=7.6e-08 Score=104.67 Aligned_cols=120 Identities=13% Similarity=0.154 Sum_probs=89.1
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc-----C---CCceEEEecc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-----C---TANLIVTNHE 145 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl-----g---~~ni~Vt~~D 145 (732)
+++.++.+|||+|||+|..+..++..++ +.+.|+++|+++..+..+++++++. | .+++.+...|
T Consensus 79 ~~~~~~~~VLDlGcG~G~~~~~la~~~~--------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d 150 (383)
T 4fsd_A 79 DGSLEGATVLDLGCGTGRDVYLASKLVG--------EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGF 150 (383)
T ss_dssp GGGGTTCEEEEESCTTSHHHHHHHHHHT--------TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESC
T ss_pred ccCCCCCEEEEecCccCHHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEcc
Confidence 4567899999999999999999998864 2579999999999999999988765 3 2688999988
Q ss_pred cccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhc
Q 004759 146 AQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLL 225 (732)
Q Consensus 146 a~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lL 225 (732)
+..+..... .......||.|++... +...++ ...+|.++.++|
T Consensus 151 ~~~l~~~~~---------------~~~~~~~fD~V~~~~~------l~~~~d----------------~~~~l~~~~r~L 193 (383)
T 4fsd_A 151 IENLATAEP---------------EGVPDSSVDIVISNCV------CNLSTN----------------KLALFKEIHRVL 193 (383)
T ss_dssp TTCGGGCBS---------------CCCCTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHE
T ss_pred HHHhhhccc---------------CCCCCCCEEEEEEccc------hhcCCC----------------HHHHHHHHHHHc
Confidence 876421100 0122368999998532 211111 247899999999
Q ss_pred cCCCEEEEEcCCC
Q 004759 226 KVGGRIVYSTCSM 238 (732)
Q Consensus 226 KpGGrLVYSTCSl 238 (732)
||||+|+.++...
T Consensus 194 kpgG~l~i~~~~~ 206 (383)
T 4fsd_A 194 RDGGELYFSDVYA 206 (383)
T ss_dssp EEEEEEEEEEEEE
T ss_pred CCCCEEEEEEecc
Confidence 9999999986443
No 169
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.64 E-value=2.1e-07 Score=90.74 Aligned_cols=126 Identities=12% Similarity=0.062 Sum_probs=91.0
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNF 158 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~ 158 (732)
+.+|||+|||+|..+..++.. ...|+++|+++..+..++++ .+++.+...|+..++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~------- 98 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-----------GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDLSD------- 98 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-----------TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGGG-------
T ss_pred CCeEEEecCCCCHHHHHHHhc-----------CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCccccccc-------
Confidence 889999999999999988775 24799999999999887765 3467888888766431
Q ss_pred CCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCC
Q 004759 159 SSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 238 (732)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSl 238 (732)
....||.|++.. ++...+ . .....+|..+.++|||||+++.++...
T Consensus 99 --------------~~~~fD~v~~~~------~l~~~~-------~-------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 99 --------------SPKRWAGLLAWY------SLIHMG-------P-------GELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp --------------SCCCEEEEEEES------SSTTCC-------T-------TTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred --------------CCCCeEEEEehh------hHhcCC-------H-------HHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 126799999842 221111 0 123568999999999999999987654
Q ss_pred CC------------cCcHHHHHHHHHHCCCcEEEEec
Q 004759 239 NP------------VENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 239 np------------~ENEaVV~~~L~~~~~~velvd~ 263 (732)
.. .-...-+..+|++.| ++++.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~ 179 (203)
T 3h2b_A 145 PSLEPMYHPVATAYRWPLPELAQALETAG--FQVTSS 179 (203)
T ss_dssp SSCEEECCSSSCEEECCHHHHHHHHHHTT--EEEEEE
T ss_pred CchhhhhchhhhhccCCHHHHHHHHHHCC--CcEEEE
Confidence 32 124667788888876 555554
No 170
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.64 E-value=6.9e-08 Score=99.63 Aligned_cols=107 Identities=20% Similarity=0.171 Sum_probs=83.6
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCCccCC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~~~~~ 156 (732)
++.+|||+|||+|..+..++.. ...|+++|+++..+..++.+++..+. .++.+...|+..++..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---- 132 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER-----------GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH---- 132 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG----
T ss_pred CCCEEEEeCCcchHHHHHHHHC-----------CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh----
Confidence 3679999999999999988775 36899999999999999999988887 6889999988775421
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
....||.|++.. .+..-++ ...+|..+.++|||||+++.++.
T Consensus 133 ----------------~~~~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 133 ----------------LETPVDLILFHA------VLEWVAD----------------PRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp ----------------CSSCEEEEEEES------CGGGCSC----------------HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ----------------cCCCceEEEECc------hhhcccC----------------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 126799999842 2211111 14689999999999999999875
Q ss_pred C
Q 004759 237 S 237 (732)
Q Consensus 237 S 237 (732)
+
T Consensus 175 ~ 175 (285)
T 4htf_A 175 N 175 (285)
T ss_dssp B
T ss_pred C
Confidence 4
No 171
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.64 E-value=2.1e-07 Score=93.73 Aligned_cols=108 Identities=17% Similarity=0.085 Sum_probs=81.5
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
...++.+|||+|||+|..+..++.. ...|+++|+++..+..+++++...+. ++.+...|+..++.
T Consensus 38 ~~~~~~~vLDlGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~--- 102 (252)
T 1wzn_A 38 AKREVRRVLDLACGTGIPTLELAER-----------GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAF--- 102 (252)
T ss_dssp CSSCCCEEEEETCTTCHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCC---
T ss_pred cccCCCEEEEeCCCCCHHHHHHHHC-----------CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhccc---
Confidence 3467889999999999999988764 35899999999999999999887765 57788888766431
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
...||.|+|... .... + -.....++|..+.++|||||+++..
T Consensus 103 -------------------~~~fD~v~~~~~--~~~~----------~-------~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 103 -------------------KNEFDAVTMFFS--TIMY----------F-------DEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp -------------------CSCEEEEEECSS--GGGG----------S-------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------------------CCCccEEEEcCC--chhc----------C-------CHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 146999997311 1000 0 0123567899999999999999976
Q ss_pred c
Q 004759 235 T 235 (732)
Q Consensus 235 T 235 (732)
+
T Consensus 145 ~ 145 (252)
T 1wzn_A 145 F 145 (252)
T ss_dssp E
T ss_pred c
Confidence 4
No 172
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.63 E-value=1.1e-07 Score=90.14 Aligned_cols=104 Identities=13% Similarity=0.120 Sum_probs=77.9
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
+++.++.+|||+|||+|..+..++.. .+.|+++|+++..+..++++ .+++.+...| ..+
T Consensus 13 ~~~~~~~~vLDiG~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d-~~~---- 71 (170)
T 3i9f_A 13 IFEGKKGVIVDYGCGNGFYCKYLLEF-----------ATKLYCIDINVIALKEVKEK-----FDSVITLSDP-KEI---- 71 (170)
T ss_dssp HHSSCCEEEEEETCTTCTTHHHHHTT-----------EEEEEEECSCHHHHHHHHHH-----CTTSEEESSG-GGS----
T ss_pred cCcCCCCeEEEECCCCCHHHHHHHhh-----------cCeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC-CCC----
Confidence 46788999999999999999888765 24899999999999888776 4577777776 221
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
....||.|++... +..-+ ....++.++.++|||||+++.
T Consensus 72 -------------------~~~~~D~v~~~~~------l~~~~----------------~~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 72 -------------------PDNSVDFILFANS------FHDMD----------------DKQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp -------------------CTTCEEEEEEESC------STTCS----------------CHHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------CCCceEEEEEccc------hhccc----------------CHHHHHHHHHHhcCCCCEEEE
Confidence 1267999997422 11111 124688999999999999999
Q ss_pred EcCCCC
Q 004759 234 STCSMN 239 (732)
Q Consensus 234 STCSln 239 (732)
++....
T Consensus 111 ~~~~~~ 116 (170)
T 3i9f_A 111 IDWRKE 116 (170)
T ss_dssp EEECSS
T ss_pred EEcCcc
Confidence 876543
No 173
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.62 E-value=1.3e-07 Score=98.98 Aligned_cols=50 Identities=14% Similarity=0.096 Sum_probs=41.1
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC 135 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg 135 (732)
.++.+|||+|||+|..+..|+..+. ...|+|+|+|+..+..++++++..+
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~---------~~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWG---------PSRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTC---------CSEEEEEESCHHHHHHHHHTC----
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcC---------CCEEEEECCCHHHHHHHHHHHHhhh
Confidence 4689999999999999999998753 4699999999999999998876554
No 174
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.62 E-value=1.2e-07 Score=108.46 Aligned_cols=180 Identities=12% Similarity=0.050 Sum_probs=111.7
Q ss_pred cccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCC-CCC-----CCCeEEEEEeCCHHHHHHHH
Q 004759 55 NEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTN-PGA-----LPNGMVIANDLDVQRCNLLI 128 (732)
Q Consensus 55 ~~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~-~~~-----~p~G~VvAnDid~~Rl~~L~ 128 (732)
.+.|.++--..++.+.+.+++++++ +|||.|||+|+..+.++..+..... ... .....++|+|+++..+.+++
T Consensus 222 k~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~ 300 (544)
T 3khk_A 222 KQGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAA 300 (544)
T ss_dssp CCSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHH
T ss_pred ccCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHH
Confidence 4567777766677777777888887 9999999999999988876642100 000 00358999999999999999
Q ss_pred HHHHHcCCC-ceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhccccc-
Q 004759 129 HQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGL- 206 (732)
Q Consensus 129 ~n~kRlg~~-ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~- 206 (732)
.|+...|.. ++.+.++|....+. .....||.|+++||.+...........-.+|..+.
T Consensus 301 ~Nl~l~gi~~~i~i~~gDtL~~~~--------------------~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~ 360 (544)
T 3khk_A 301 MNMVIRGIDFNFGKKNADSFLDDQ--------------------HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTN 360 (544)
T ss_dssp HHHHHTTCCCBCCSSSCCTTTSCS--------------------CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC
T ss_pred HHHHHhCCCcccceeccchhcCcc--------------------cccccccEEEECCCcCCccccchhhhhhhhhhcCcc
Confidence 998877754 22224444332111 12368999999999986422110000001222110
Q ss_pred ------ccchHHHHHHHHHHHHhhccCCCEEEEEcCC--CCCc-CcHHHHHHHHHHCC
Q 004759 207 ------GNGLHSLQVQIAMRGISLLKVGGRIVYSTCS--MNPV-ENEAVVAEILRKCE 255 (732)
Q Consensus 207 ------~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS--lnp~-ENEaVV~~~L~~~~ 255 (732)
...-...+...+.+++++||+||++++.+-. +.-. -.+.-+.+.|-+.+
T Consensus 361 ~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~ 418 (544)
T 3khk_A 361 GEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQD 418 (544)
T ss_dssp --CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTT
T ss_pred cccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcCcchHHHHHHHHHhCC
Confidence 1111123446899999999999998877532 2222 24666676666544
No 175
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.61 E-value=4.2e-08 Score=104.22 Aligned_cols=90 Identities=19% Similarity=0.252 Sum_probs=72.7
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
+|+++++.+|||+|||+|+.|..|++.+ +.+.|+|+|+|+.++..++++++.++ .++.+...|+..++..
T Consensus 21 ~L~~~~g~~vLD~g~G~G~~s~~la~~~---------~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~ 90 (301)
T 1m6y_A 21 FLKPEDEKIILDCTVGEGGHSRAILEHC---------PGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFL 90 (301)
T ss_dssp HHCCCTTCEEEETTCTTSHHHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHH
T ss_pred hcCCCCCCEEEEEeCCcCHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHH
Confidence 4678899999999999999999999874 24799999999999999999998887 7889999887664321
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCC
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 188 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSG 188 (732)
+ .......||.|++|+|||.
T Consensus 91 -l---------------~~~g~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 91 -L---------------KTLGIEKVDGILMDLGVST 110 (301)
T ss_dssp -H---------------HHTTCSCEEEEEEECSCCH
T ss_pred -H---------------HhcCCCCCCEEEEcCccch
Confidence 0 0001147999999999985
No 176
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.61 E-value=3.9e-08 Score=99.57 Aligned_cols=114 Identities=16% Similarity=0.102 Sum_probs=79.9
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCC-HHHHHHH---HHHHHHcCCCceEEEecccccCCC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLD-VQRCNLL---IHQTKRMCTANLIVTNHEAQHFPG 151 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid-~~Rl~~L---~~n~kRlg~~ni~Vt~~Da~~fp~ 151 (732)
.+++++|||+|||+|..+..|+.. .+.+.|+|+|++ ...+..+ +.++++.+.+++.+...|+..+|.
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~---------~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~ 92 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIN---------DQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPF 92 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHT---------CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCG
T ss_pred CCCCCEEEEEeccCcHHHHHHHHh---------CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhh
Confidence 468999999999999999998764 146899999999 5554444 777777788899999999887652
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
. ....||.|.+..| .|..... .......+|..+.++|||||++
T Consensus 93 ~--------------------~~d~v~~i~~~~~---------~~~~~~~--------~~~~~~~~l~~~~r~LkpGG~l 135 (225)
T 3p2e_A 93 E--------------------LKNIADSISILFP---------WGTLLEY--------VIKPNRDILSNVADLAKKEAHF 135 (225)
T ss_dssp G--------------------GTTCEEEEEEESC---------CHHHHHH--------HHTTCHHHHHHHHTTEEEEEEE
T ss_pred h--------------------ccCeEEEEEEeCC---------CcHHhhh--------hhcchHHHHHHHHHhcCCCcEE
Confidence 1 0145777777554 0110000 0001245788999999999999
Q ss_pred EEEc
Q 004759 232 VYST 235 (732)
Q Consensus 232 VYST 235 (732)
+.++
T Consensus 136 ~i~~ 139 (225)
T 3p2e_A 136 EFVT 139 (225)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9843
No 177
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.60 E-value=7.5e-08 Score=101.78 Aligned_cols=114 Identities=13% Similarity=0.098 Sum_probs=81.9
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc-----CCCceEEEecccccCCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-----CTANLIVTNHEAQHFPG 151 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl-----g~~ni~Vt~~Da~~fp~ 151 (732)
....+|||+|||.|+.+..++... +...|+++|+|+..+..+++++..+ ..+++.+...|+..+..
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~---------~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~ 152 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK---------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVN 152 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT---------TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHh
Confidence 345799999999999988887642 3578999999999999999998765 24578899999877532
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
. ....||.|++|++.. .| | . .+-...++++.+.++|+|||++
T Consensus 153 ~--------------------~~~~fDvIi~D~~~p-~~-----~--------~----~~l~~~~f~~~~~~~LkpgG~l 194 (294)
T 3adn_A 153 Q--------------------TSQTFDVIISDCTDP-IG-----P--------G----ESLFTSAFYEGCKRCLNPGGIF 194 (294)
T ss_dssp C--------------------CCCCEEEEEECC----------------------------CCHHHHHHHHHTEEEEEEE
T ss_pred h--------------------cCCCccEEEECCCCc-cC-----c--------c----hhccHHHHHHHHHHhcCCCCEE
Confidence 1 126799999998721 11 0 0 0112256788899999999999
Q ss_pred EEEcCC
Q 004759 232 VYSTCS 237 (732)
Q Consensus 232 VYSTCS 237 (732)
|..++|
T Consensus 195 v~~~~s 200 (294)
T 3adn_A 195 VAQNGV 200 (294)
T ss_dssp EEEEEE
T ss_pred EEecCC
Confidence 987665
No 178
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.57 E-value=2.1e-07 Score=102.90 Aligned_cols=111 Identities=12% Similarity=0.040 Sum_probs=82.2
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHH-------HcCC--CceEEEe
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTK-------RMCT--ANLIVTN 143 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~k-------Rlg~--~ni~Vt~ 143 (732)
.+++++|++|||+|||.|..+.++|... +.+.|+|+|+++..+.+++.+++ .+|. .++.+.+
T Consensus 168 ~l~l~~gd~VLDLGCGtG~l~l~lA~~~---------g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 168 EIKMTDDDLFVDLGSGVGQVVLQVAAAT---------NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HHCCCTTCEEEEESCTTSHHHHHHHHHC---------CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred hcCCCCCCEEEEeCCCCCHHHHHHHHHC---------CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 4578999999999999999999998753 24579999999999988887653 3454 6799999
Q ss_pred cccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHh
Q 004759 144 HEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGIS 223 (732)
Q Consensus 144 ~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~ 223 (732)
+|+..+|.. .....||.|++..+|- .|+ ..+.|...++
T Consensus 239 GD~~~lp~~-------------------d~~~~aDVVf~Nn~~F-------~pd----------------l~~aL~Ei~R 276 (438)
T 3uwp_A 239 GDFLSEEWR-------------------ERIANTSVIFVNNFAF-------GPE----------------VDHQLKERFA 276 (438)
T ss_dssp CCTTSHHHH-------------------HHHHTCSEEEECCTTC-------CHH----------------HHHHHHHHHT
T ss_pred CcccCCccc-------------------cccCCccEEEEccccc-------Cch----------------HHHHHHHHHH
Confidence 998764310 0114699999876531 122 1234567789
Q ss_pred hccCCCEEEEE
Q 004759 224 LLKVGGRIVYS 234 (732)
Q Consensus 224 lLKpGGrLVYS 234 (732)
.|||||+||-+
T Consensus 277 vLKPGGrIVss 287 (438)
T 3uwp_A 277 NMKEGGRIVSS 287 (438)
T ss_dssp TSCTTCEEEES
T ss_pred cCCCCcEEEEe
Confidence 99999999965
No 179
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.57 E-value=1.4e-07 Score=101.23 Aligned_cols=122 Identities=11% Similarity=0.049 Sum_probs=88.1
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~ 152 (732)
+.+.++.+|||+|||+|..+..+++. +.+.|+|+|+++ .+..++++++..+. .++.+...|+..++.
T Consensus 60 ~~~~~~~~VLDiGcGtG~ls~~la~~----------g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~- 127 (340)
T 2fyt_A 60 PHIFKDKVVLDVGCGTGILSMFAAKA----------GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL- 127 (340)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHT----------TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC-
T ss_pred hhhcCCCEEEEeeccCcHHHHHHHHc----------CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC-
Confidence 34577899999999999998888764 135899999996 89999999998887 689999988876431
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
...+||.|+++.... .. . + ......+|..+.++|||||+++
T Consensus 128 --------------------~~~~~D~Ivs~~~~~--~l-~-~---------------~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 128 --------------------PVEKVDVIISEWMGY--FL-L-F---------------ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp --------------------SCSCEEEEEECCCBT--TB-T-T---------------TCHHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------CCCcEEEEEEcCchh--hc-c-C---------------HHHHHHHHHHHHhhcCCCcEEE
Confidence 125799999864200 10 0 0 0122357888889999999999
Q ss_pred EEcCCC--CCcCcHHH
Q 004759 233 YSTCSM--NPVENEAV 246 (732)
Q Consensus 233 YSTCSl--np~ENEaV 246 (732)
.+.|++ .+.++...
T Consensus 169 p~~~~~~~~~~~~~~~ 184 (340)
T 2fyt_A 169 PDICTISLVAVSDVNK 184 (340)
T ss_dssp SCEEEEEEEEECCHHH
T ss_pred cccceEEEEEecchhH
Confidence 665553 34555544
No 180
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.57 E-value=1.7e-07 Score=100.83 Aligned_cols=125 Identities=13% Similarity=0.076 Sum_probs=91.2
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~ 152 (732)
+...++.+|||+|||+|..+..++.. +.+.|+|+|+++ .+..++++++..+. .++.+...|+..++.
T Consensus 46 l~~~~~~~VLDiGcGtG~ls~~la~~----------g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~- 113 (348)
T 2y1w_A 46 HTDFKDKIVLDVGCGSGILSFFAAQA----------GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL- 113 (348)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHT----------TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC-
T ss_pred cccCCcCEEEEcCCCccHHHHHHHhC----------CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC-
Confidence 45568999999999999999888764 246999999996 78888888888887 578898888766431
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
..+||+|+++.+....+ + ......+..+.++|||||+++
T Consensus 114 ---------------------~~~~D~Ivs~~~~~~~~----~----------------~~~~~~l~~~~~~LkpgG~li 152 (348)
T 2y1w_A 114 ---------------------PEQVDIIISEPMGYMLF----N----------------ERMLESYLHAKKYLKPSGNMF 152 (348)
T ss_dssp ---------------------SSCEEEEEECCCBTTBT----T----------------TSHHHHHHHGGGGEEEEEEEE
T ss_pred ---------------------CCceeEEEEeCchhcCC----h----------------HHHHHHHHHHHhhcCCCeEEE
Confidence 14699999865422111 0 012345667889999999999
Q ss_pred EEcCCCC--CcCcHHHHHHHH
Q 004759 233 YSTCSMN--PVENEAVVAEIL 251 (732)
Q Consensus 233 YSTCSln--p~ENEaVV~~~L 251 (732)
.+++++. |.+.+..-.+.+
T Consensus 153 ~~~~~~~~~~i~~~~~~~~~~ 173 (348)
T 2y1w_A 153 PTIGDVHLAPFTDEQLYMEQF 173 (348)
T ss_dssp SCEEEEEEEEECCHHHHHHHH
T ss_pred EecCcEEEEEecchHHhhhhc
Confidence 8877754 667766554444
No 181
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.57 E-value=8.8e-08 Score=100.15 Aligned_cols=112 Identities=16% Similarity=0.099 Sum_probs=83.1
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc-----------CCCceEEEecc
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-----------CTANLIVTNHE 145 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl-----------g~~ni~Vt~~D 145 (732)
..+.+|||+|||.|+.+..++.. . .+.|+++|+|+..+..+++++ ++ ..+++.+...|
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~---------~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D 142 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D---------VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGD 142 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C---------CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C---------CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECc
Confidence 45679999999999999888664 2 479999999999999999887 44 23578888888
Q ss_pred cccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhc
Q 004759 146 AQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLL 225 (732)
Q Consensus 146 a~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lL 225 (732)
+..+.. . ...||.|++|+|+. .|. + ..+ .+.+++..+.++|
T Consensus 143 ~~~~l~--------------------~-~~~fD~Ii~d~~~~-~~~----~-----------~~l--~~~~~l~~~~~~L 183 (281)
T 1mjf_A 143 GFEFIK--------------------N-NRGFDVIIADSTDP-VGP----A-----------KVL--FSEEFYRYVYDAL 183 (281)
T ss_dssp HHHHHH--------------------H-CCCEEEEEEECCCC-C--------------------T--TSHHHHHHHHHHE
T ss_pred hHHHhc--------------------c-cCCeeEEEECCCCC-CCc----c-----------hhh--hHHHHHHHHHHhc
Confidence 765311 1 25799999999852 121 0 011 1356788899999
Q ss_pred cCCCEEEEEcCCC
Q 004759 226 KVGGRIVYSTCSM 238 (732)
Q Consensus 226 KpGGrLVYSTCSl 238 (732)
+|||+++..+++.
T Consensus 184 ~pgG~lv~~~~~~ 196 (281)
T 1mjf_A 184 NNPGIYVTQAGSV 196 (281)
T ss_dssp EEEEEEEEEEEET
T ss_pred CCCcEEEEEcCCc
Confidence 9999999987664
No 182
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.56 E-value=2.6e-07 Score=92.15 Aligned_cols=109 Identities=16% Similarity=0.145 Sum_probs=80.6
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
+.++.+|||+|||+|..+..++.. ..|+++|+++..+..+++++...+ .++.+...|+..++.
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~------------~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~---- 93 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH------------YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELEL---- 93 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT------------SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCC----
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC------------CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCC----
Confidence 356789999999999988877542 579999999999999999988776 467788887765431
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
...||.|++... .+...+ -.....++|..+.++|||||+++.++
T Consensus 94 ------------------~~~fD~v~~~~~-----~~~~~~-------------~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 94 ------------------PEPVDAITILCD-----SLNYLQ-------------TEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp ------------------SSCEEEEEECTT-----GGGGCC-------------SHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCcCEEEEeCC-----chhhcC-------------CHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 157999997421 111000 01234578999999999999999877
Q ss_pred CC
Q 004759 236 CS 237 (732)
Q Consensus 236 CS 237 (732)
.+
T Consensus 138 ~~ 139 (243)
T 3d2l_A 138 HS 139 (243)
T ss_dssp EC
T ss_pred CC
Confidence 65
No 183
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.56 E-value=1.4e-07 Score=97.04 Aligned_cols=107 Identities=21% Similarity=0.214 Sum_probs=80.2
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCC
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPG 151 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~ 151 (732)
..+.+.++.+|||+|||+|..+..+++. .+.|+++|+++..+..++.+. +++.+...|+..+|.
T Consensus 51 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~ 114 (279)
T 3ccf_A 51 QLLNPQPGEFILDLGCGTGQLTEKIAQS-----------GAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRV 114 (279)
T ss_dssp HHHCCCTTCEEEEETCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCC
T ss_pred HHhCCCCCCEEEEecCCCCHHHHHHHhC-----------CCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCc
Confidence 4557789999999999999999998871 479999999999998877653 566777777766431
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
...||.|++... +...+ ....+|..+.++|||||++
T Consensus 115 ----------------------~~~fD~v~~~~~------l~~~~----------------d~~~~l~~~~~~LkpgG~l 150 (279)
T 3ccf_A 115 ----------------------DKPLDAVFSNAM------LHWVK----------------EPEAAIASIHQALKSGGRF 150 (279)
T ss_dssp ----------------------SSCEEEEEEESC------GGGCS----------------CHHHHHHHHHHHEEEEEEE
T ss_pred ----------------------CCCcCEEEEcch------hhhCc----------------CHHHHHHHHHHhcCCCcEE
Confidence 257999997321 11111 1246789999999999999
Q ss_pred EEEcCCC
Q 004759 232 VYSTCSM 238 (732)
Q Consensus 232 VYSTCSl 238 (732)
+.++...
T Consensus 151 ~~~~~~~ 157 (279)
T 3ccf_A 151 VAEFGGK 157 (279)
T ss_dssp EEEEECT
T ss_pred EEEecCC
Confidence 9887553
No 184
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.56 E-value=1.1e-07 Score=99.11 Aligned_cols=108 Identities=17% Similarity=0.174 Sum_probs=83.0
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEecccccCCCCccC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT---ANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~---~ni~Vt~~Da~~fp~~~~~ 155 (732)
+.+|||+|||+|..+..|+.. ...|+++|+++..+..+++++...+. .++.+...|+..++.
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---- 147 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL-----------GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL---- 147 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT-----------TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC----
T ss_pred CCcEEEEeccCCHHHHHHHHc-----------CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc----
Confidence 349999999999999988765 25799999999999999999887764 578899998877542
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
...||.|+|.. + .+..+. ...+.++|.++.++|||||+|+.++
T Consensus 148 ------------------~~~fD~v~~~~-----~-------~~~~~~-------~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 148 ------------------DKRFGTVVISS-----G-------SINELD-------EADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp ------------------SCCEEEEEECH-----H-------HHTTSC-------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCcCEEEECC-----c-------ccccCC-------HHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 26799998621 0 111000 1234678999999999999999998
Q ss_pred CCC
Q 004759 236 CSM 238 (732)
Q Consensus 236 CSl 238 (732)
...
T Consensus 191 ~~~ 193 (299)
T 3g2m_A 191 AMS 193 (299)
T ss_dssp ECC
T ss_pred ecC
Confidence 776
No 185
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.56 E-value=2.6e-07 Score=97.72 Aligned_cols=118 Identities=10% Similarity=0.059 Sum_probs=74.8
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC------ceEEEecccccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA------NLIVTNHEAQHFP 150 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~------ni~Vt~~Da~~fp 150 (732)
.++.+|||+|||+|+-+..++.. ..+.|+|+|+|+..+..++.+....+.. ++.+...|...-.
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~----------~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~ 116 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG----------EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDT 116 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSS
T ss_pred CCCCeEEEEecCCcHhHHHHHhc----------CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccch
Confidence 45889999999999876655432 1368999999999999999988766542 2334444432100
Q ss_pred C-CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 151 G-CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 151 ~-~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
. ..+ +.......||.|+|-- .+ +.-|... + +..+|+++.++|||||
T Consensus 117 ~~~~l--------------~~~~~~~~FD~V~~~~------~l------hy~~~~~-----~--~~~~l~~~~r~LkpGG 163 (302)
T 2vdw_A 117 FVSSV--------------REVFYFGKFNIIDWQF------AI------HYSFHPR-----H--YATVMNNLSELTASGG 163 (302)
T ss_dssp HHHHH--------------HTTCCSSCEEEEEEES------CG------GGTCSTT-----T--HHHHHHHHHHHEEEEE
T ss_pred hhhhh--------------hccccCCCeeEEEECc------hH------HHhCCHH-----H--HHHHHHHHHHHcCCCC
Confidence 0 000 0001236899999721 11 0111111 1 2578999999999999
Q ss_pred EEEEEcCC
Q 004759 230 RIVYSTCS 237 (732)
Q Consensus 230 rLVYSTCS 237 (732)
+++.+|+.
T Consensus 164 ~~i~~~~~ 171 (302)
T 2vdw_A 164 KVLITTMD 171 (302)
T ss_dssp EEEEEEEC
T ss_pred EEEEEeCC
Confidence 99998865
No 186
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.56 E-value=4.7e-07 Score=100.75 Aligned_cols=113 Identities=12% Similarity=0.005 Sum_probs=82.1
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHH-------HHHHHHcC--CCceEEEe
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLL-------IHQTKRMC--TANLIVTN 143 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L-------~~n~kRlg--~~ni~Vt~ 143 (732)
.++++++++|||+|||+|..++.+|...+ .+.|+|+|+++..+..+ +.+++++| ..++.+..
T Consensus 237 ~l~l~~g~~VLDLGCGsG~la~~LA~~~g---------~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 237 QCQLKKGDTFMDLGSGVGNCVVQAALECG---------CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HTTCCTTCEEEEESCTTSHHHHHHHHHHC---------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred hcCCCCCCEEEEeCCCcCHHHHHHHHHCC---------CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 35788999999999999999999998753 36899999999998888 88888888 56888887
Q ss_pred cccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHh
Q 004759 144 HEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGIS 223 (732)
Q Consensus 144 ~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~ 223 (732)
+|+..-+. +.......||+|++...+- .++ ....|...++
T Consensus 308 gD~~~~~~-----------------~~~~~~~~FDvIvvn~~l~-------~~d----------------~~~~L~el~r 347 (433)
T 1u2z_A 308 KKSFVDNN-----------------RVAELIPQCDVILVNNFLF-------DED----------------LNKKVEKILQ 347 (433)
T ss_dssp SSCSTTCH-----------------HHHHHGGGCSEEEECCTTC-------CHH----------------HHHHHHHHHT
T ss_pred cCcccccc-----------------ccccccCCCCEEEEeCccc-------ccc----------------HHHHHHHHHH
Confidence 65432100 0000125799999853210 011 1245678899
Q ss_pred hccCCCEEEEE
Q 004759 224 LLKVGGRIVYS 234 (732)
Q Consensus 224 lLKpGGrLVYS 234 (732)
.|||||+||.+
T Consensus 348 ~LKpGG~lVi~ 358 (433)
T 1u2z_A 348 TAKVGCKIISL 358 (433)
T ss_dssp TCCTTCEEEES
T ss_pred hCCCCeEEEEe
Confidence 99999999875
No 187
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.55 E-value=1.2e-07 Score=98.04 Aligned_cols=122 Identities=19% Similarity=0.184 Sum_probs=84.3
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC----CceEEEecccccC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT----ANLIVTNHEAQHF 149 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~----~ni~Vt~~Da~~f 149 (732)
+...++.+|||+|||+|..+..+++. ...|+|+|+++..+..+++++...+. .++.+...|+..+
T Consensus 53 l~~~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~ 121 (293)
T 3thr_A 53 LRQHGCHRVLDVACGTGVDSIMLVEE-----------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTL 121 (293)
T ss_dssp HHHTTCCEEEETTCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGH
T ss_pred hcccCCCEEEEecCCCCHHHHHHHHC-----------CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhC
Confidence 34567899999999999999998775 24899999999999999888754432 3566777776553
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
+.- ......||.|+|- |. ++.+-++.+ .-.....++|.++.++|||||
T Consensus 122 ~~~------------------~~~~~~fD~V~~~----g~-~l~~~~~~~---------~~~~~~~~~l~~~~~~LkpgG 169 (293)
T 3thr_A 122 DKD------------------VPAGDGFDAVICL----GN-SFAHLPDSK---------GDQSEHRLALKNIASMVRPGG 169 (293)
T ss_dssp HHH------------------SCCTTCEEEEEEC----TT-CGGGSCCSS---------SSSHHHHHHHHHHHHTEEEEE
T ss_pred ccc------------------cccCCCeEEEEEc----Ch-HHhhcCccc---------cCHHHHHHHHHHHHHHcCCCe
Confidence 310 0123689999972 11 121222110 001234678999999999999
Q ss_pred EEEEEcCCC
Q 004759 230 RIVYSTCSM 238 (732)
Q Consensus 230 rLVYSTCSl 238 (732)
+++.++++.
T Consensus 170 ~l~~~~~~~ 178 (293)
T 3thr_A 170 LLVIDHRNY 178 (293)
T ss_dssp EEEEEEECH
T ss_pred EEEEEeCCH
Confidence 999998764
No 188
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.54 E-value=1.4e-07 Score=101.55 Aligned_cols=119 Identities=12% Similarity=0.053 Sum_probs=87.2
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~Vt~~Da~~fp~~~~ 154 (732)
+.++.+|||+|||+|..+..+++. +.+.|+|+|++ ..+..++++++..+..+ +.+..+|+..++.
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~----------g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~--- 129 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA----------GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVEL--- 129 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT----------TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCC---
T ss_pred cCCCCEEEEEeccchHHHHHHHHC----------CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccC---
Confidence 457899999999999999888775 24699999999 59999999999988765 8899998877531
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
....||.|+++....... . ......++..+.++|||||+++.+
T Consensus 130 ------------------~~~~fD~Iis~~~~~~l~----~---------------~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 130 ------------------PVEKVDIIISEWMGYCLF----Y---------------ESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp ------------------SSSCEEEEEECCCBBTBT----B---------------TCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ------------------CCCceEEEEEcccccccc----C---------------chhHHHHHHHHHHhCCCCCEEccc
Confidence 126799999975311110 0 011235777888999999999976
Q ss_pred cCCC--CCcCcHH
Q 004759 235 TCSM--NPVENEA 245 (732)
Q Consensus 235 TCSl--np~ENEa 245 (732)
.+++ .+.+...
T Consensus 173 ~~~~~~~~~~~~~ 185 (349)
T 3q7e_A 173 RATLYVTAIEDRQ 185 (349)
T ss_dssp EEEEEEEEECCHH
T ss_pred cceEEEeeecChh
Confidence 6664 2444433
No 189
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.54 E-value=3.2e-07 Score=91.28 Aligned_cols=108 Identities=16% Similarity=0.070 Sum_probs=80.7
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
++.+|||+|||+|..+..++.. ...|+++|+++..+..+++++...+. ++.+...|+..++.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-----------~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~------ 98 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-----------FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNI------ 98 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-----------SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCC------
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-----------CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCc------
Confidence 7889999999999999888764 24799999999999999999887765 67788887766431
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 237 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS 237 (732)
...||.|++.. +++...++ .....++|.++.++|||||+++.++.+
T Consensus 99 ----------------~~~fD~v~~~~-----~~l~~~~~-------------~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 99 ----------------NRKFDLITCCL-----DSTNYIID-------------SDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp ----------------SCCEEEEEECT-----TGGGGCCS-------------HHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred ----------------cCCceEEEEcC-----ccccccCC-------------HHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 15799999732 01111100 023457899999999999999986543
No 190
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.54 E-value=1.5e-07 Score=93.86 Aligned_cols=108 Identities=16% Similarity=0.062 Sum_probs=79.0
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
++...++.+|||+|||+|..+..++.. + .+.|+++|+++..+..++++.. ..++.+...|+..++.
T Consensus 38 ~~~~~~~~~vLdiG~G~G~~~~~l~~~-~---------~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~- 103 (243)
T 3bkw_A 38 MLPEVGGLRIVDLGCGFGWFCRWAHEH-G---------ASYVLGLDLSEKMLARARAAGP---DTGITYERADLDKLHL- 103 (243)
T ss_dssp HSCCCTTCEEEEETCTTCHHHHHHHHT-T---------CSEEEEEESCHHHHHHHHHTSC---SSSEEEEECCGGGCCC-
T ss_pred hccccCCCEEEEEcCcCCHHHHHHHHC-C---------CCeEEEEcCCHHHHHHHHHhcc---cCCceEEEcChhhccC-
Confidence 455678999999999999999988765 1 2489999999999988776542 2467788888766431
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
....||.|++... +...+ ....+|.++.++|||||+++
T Consensus 104 --------------------~~~~fD~v~~~~~------l~~~~----------------~~~~~l~~~~~~L~pgG~l~ 141 (243)
T 3bkw_A 104 --------------------PQDSFDLAYSSLA------LHYVE----------------DVARLFRTVHQALSPGGHFV 141 (243)
T ss_dssp --------------------CTTCEEEEEEESC------GGGCS----------------CHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------CCCCceEEEEecc------ccccc----------------hHHHHHHHHHHhcCcCcEEE
Confidence 1267999997321 11111 12468899999999999999
Q ss_pred EEcC
Q 004759 233 YSTC 236 (732)
Q Consensus 233 YSTC 236 (732)
.++.
T Consensus 142 ~~~~ 145 (243)
T 3bkw_A 142 FSTE 145 (243)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9863
No 191
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.54 E-value=3.2e-07 Score=91.14 Aligned_cols=102 Identities=15% Similarity=0.102 Sum_probs=75.2
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||++||+|..+..+++. ...|+++|+++..+..++.+... ++.+...|+..++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~------ 99 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEH-----------FNDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQ------ 99 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTT-----------CSCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCC------
T ss_pred cCCCcEEEECCCCCHHHHHHHHh-----------CCcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcC------
Confidence 46789999999999998888664 23699999999999887765432 6788888776531
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHH-hhccCCCEEEEEc
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGI-SLLKVGGRIVYST 235 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl-~lLKpGGrLVYST 235 (732)
....||.|++- +++.+-++ ..++|+.+. ++|||||+|+.++
T Consensus 100 ----------------~~~~fD~v~~~------~~l~~~~~----------------~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 100 ----------------LPRRYDNIVLT------HVLEHIDD----------------PVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp ----------------CSSCEEEEEEE------SCGGGCSS----------------HHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ----------------cCCcccEEEEh------hHHHhhcC----------------HHHHHHHHHHHhcCCCCEEEEEc
Confidence 12679999972 22222111 146899999 9999999999987
Q ss_pred CC
Q 004759 236 CS 237 (732)
Q Consensus 236 CS 237 (732)
..
T Consensus 142 ~~ 143 (250)
T 2p7i_A 142 PN 143 (250)
T ss_dssp EC
T ss_pred CC
Confidence 54
No 192
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.53 E-value=1.3e-07 Score=94.62 Aligned_cols=112 Identities=16% Similarity=0.137 Sum_probs=81.8
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc-CCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH-FPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~-fp~~~~ 154 (732)
+.++.+|||+|||+|..+..++.. ...|+++|+++..+..++++ .+++.+...|+.. +|
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~---- 105 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ-----------AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELP---- 105 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG-----------SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCC----
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccC----
Confidence 468999999999999999888765 35899999999999988776 4578888888743 22
Q ss_pred CCCCCCCCccccccccccc-cccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 155 NKNFSSASDKGIESESNMG-QLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~-~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
.. ...||.|++.. + +..+|.++.++|||||+|+.
T Consensus 106 -----------------~~~~~~fD~v~~~~----------~------------------~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 106 -----------------AGLGAPFGLIVSRR----------G------------------PTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp -----------------TTCCCCEEEEEEES----------C------------------CSGGGGGHHHHEEEEEEEEE
T ss_pred -----------------CcCCCCEEEEEeCC----------C------------------HHHHHHHHHHHcCCCcEEEE
Confidence 11 26799999841 0 12346677889999999993
Q ss_pred EcCCCCCcCcHHHHHHHHHHCCC
Q 004759 234 STCSMNPVENEAVVAEILRKCEG 256 (732)
Q Consensus 234 STCSlnp~ENEaVV~~~L~~~~~ 256 (732)
... ..+...+...|.+.+-
T Consensus 141 ~~~----~~~~~~~~~~l~~~Gf 159 (226)
T 3m33_A 141 VGP----RLNVPEVPERLAAVGW 159 (226)
T ss_dssp EES----SSCCTHHHHHHHHTTC
T ss_pred eCC----cCCHHHHHHHHHHCCC
Confidence 322 2344456778888763
No 193
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.53 E-value=1.7e-07 Score=98.07 Aligned_cols=115 Identities=16% Similarity=0.086 Sum_probs=84.7
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC----CCceEEEecccccCCCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC----TANLIVTNHEAQHFPGC 152 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg----~~ni~Vt~~Da~~fp~~ 152 (732)
.++.+|||+|||.|+.+..++... +...|+++|+|+..+..+++++..++ .+++.+...|+..+..
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~- 146 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK---------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE- 146 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT---------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH-
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHH-
Confidence 456899999999999988886531 35799999999999999998876543 4678888888876421
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
.....||.|++|++.. .|. . ..+ ...+++..+.++|+|||++|
T Consensus 147 -------------------~~~~~fD~Ii~d~~~~-~~~-----~----------~~l--~~~~~l~~~~~~L~pgG~lv 189 (283)
T 2i7c_A 147 -------------------NVTNTYDVIIVDSSDP-IGP-----A----------ETL--FNQNFYEKIYNALKPNGYCV 189 (283)
T ss_dssp -------------------HCCSCEEEEEEECCCT-TTG-----G----------GGG--SSHHHHHHHHHHEEEEEEEE
T ss_pred -------------------hCCCCceEEEEcCCCC-CCc-----c----------hhh--hHHHHHHHHHHhcCCCcEEE
Confidence 0126799999997632 111 0 011 12568889999999999999
Q ss_pred EEcCCC
Q 004759 233 YSTCSM 238 (732)
Q Consensus 233 YSTCSl 238 (732)
..+++.
T Consensus 190 ~~~~~~ 195 (283)
T 2i7c_A 190 AQCESL 195 (283)
T ss_dssp EECCCT
T ss_pred EECCCc
Confidence 987763
No 194
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.53 E-value=5.5e-07 Score=92.88 Aligned_cols=136 Identities=12% Similarity=0.058 Sum_probs=89.1
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHH-----------------cCCC
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR-----------------MCTA 137 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kR-----------------lg~~ 137 (732)
.+.++.+|||++||+|.-+..|++. ...|+|+|+++..+..++++... -...
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~-----------G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR-----------GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSG 133 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT-----------TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTS
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC-----------CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCC
Confidence 3468899999999999999998875 24899999999999987654321 0125
Q ss_pred ceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHH
Q 004759 138 NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQI 217 (732)
Q Consensus 138 ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~I 217 (732)
++.+..+|+..++.. ....||.|++- +++-.-|. ....++
T Consensus 134 ~i~~~~~D~~~l~~~--------------------~~~~FD~V~~~------~~l~~l~~--------------~~~~~~ 173 (252)
T 2gb4_A 134 SISLYCCSIFDLPRA--------------------NIGKFDRIWDR------GALVAINP--------------GDHDRY 173 (252)
T ss_dssp SEEEEESCTTTGGGG--------------------CCCCEEEEEES------SSTTTSCG--------------GGHHHH
T ss_pred ceEEEECccccCCcc--------------------cCCCEEEEEEh------hhhhhCCH--------------HHHHHH
Confidence 688888887764320 11579999962 11211111 123467
Q ss_pred HHHHHhhccCCCEEEEEcCCCCCc--------CcHHHHHHHHHHCCCcEEEEecC
Q 004759 218 AMRGISLLKVGGRIVYSTCSMNPV--------ENEAVVAEILRKCEGSVELVDVS 264 (732)
Q Consensus 218 L~rAl~lLKpGGrLVYSTCSlnp~--------ENEaVV~~~L~~~~~~velvd~s 264 (732)
+.+..++|||||+++..|....+. -.++-+.+++.. .++++.+.
T Consensus 174 l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~---~f~v~~~~ 225 (252)
T 2gb4_A 174 ADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT---KCSMQCLE 225 (252)
T ss_dssp HHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT---TEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC---CeEEEEEe
Confidence 889999999999997665443211 134455666653 26665543
No 195
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.53 E-value=2e-07 Score=91.51 Aligned_cols=106 Identities=15% Similarity=0.028 Sum_probs=73.3
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
...++.+|||++||+|..+..++.. ...|+++|+++..+..++++ .++.+...++..+....
T Consensus 49 ~~~~~~~vLdiG~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~- 110 (227)
T 3e8s_A 49 LGRQPERVLDLGCGEGWLLRALADR-----------GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAK- 110 (227)
T ss_dssp HHTCCSEEEEETCTTCHHHHHHHTT-----------TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTC-
T ss_pred hcCCCCEEEEeCCCCCHHHHHHHHC-----------CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhcccc-
Confidence 4456799999999999999888765 35899999999998877765 33445555554431100
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
......||.|++... +. .+ ....+|..+.++|||||+|+.+
T Consensus 111 ----------------~~~~~~fD~v~~~~~------l~-~~----------------~~~~~l~~~~~~L~pgG~l~~~ 151 (227)
T 3e8s_A 111 ----------------VPVGKDYDLICANFA------LL-HQ----------------DIIELLSAMRTLLVPGGALVIQ 151 (227)
T ss_dssp ----------------SCCCCCEEEEEEESC------CC-SS----------------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred ----------------cccCCCccEEEECch------hh-hh----------------hHHHHHHHHHHHhCCCeEEEEE
Confidence 011246999998432 11 11 1136788999999999999998
Q ss_pred cCC
Q 004759 235 TCS 237 (732)
Q Consensus 235 TCS 237 (732)
+..
T Consensus 152 ~~~ 154 (227)
T 3e8s_A 152 TLH 154 (227)
T ss_dssp ECC
T ss_pred ecC
Confidence 753
No 196
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.52 E-value=4.9e-07 Score=90.88 Aligned_cols=124 Identities=14% Similarity=0.031 Sum_probs=85.1
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
.+.++.+|||+|||+|..+..+++. ...|+++|+++..+..++.+ +.+...|+..+..
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~--- 95 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEE-----------GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLK--- 95 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHH-----------TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHH---
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhC-----------CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhh---
Confidence 4578899999999999999888775 24699999999998877654 4566666554310
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
......||.|++. +++..-++ .....+|..+.++|||||+++.+
T Consensus 96 ----------------~~~~~~fD~i~~~------~~l~~~~~--------------~~~~~~l~~~~~~LkpgG~l~~~ 139 (240)
T 3dli_A 96 ----------------SLPDKYLDGVMIS------HFVEHLDP--------------ERLFELLSLCYSKMKYSSYIVIE 139 (240)
T ss_dssp ----------------TSCTTCBSEEEEE------SCGGGSCG--------------GGHHHHHHHHHHHBCTTCCEEEE
T ss_pred ----------------hcCCCCeeEEEEC------CchhhCCc--------------HHHHHHHHHHHHHcCCCcEEEEE
Confidence 1123689999972 22222111 11256889999999999999998
Q ss_pred cCCCCC---------------cCcHHHHHHHHHHCCC
Q 004759 235 TCSMNP---------------VENEAVVAEILRKCEG 256 (732)
Q Consensus 235 TCSlnp---------------~ENEaVV~~~L~~~~~ 256 (732)
+..... .-...-+..+|++.|-
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 176 (240)
T 3dli_A 140 SPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGF 176 (240)
T ss_dssp EECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTC
T ss_pred eCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCC
Confidence 765321 1234566777887763
No 197
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.52 E-value=6.3e-08 Score=100.87 Aligned_cols=106 Identities=12% Similarity=0.045 Sum_probs=69.9
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC------ceEEE--ecccc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA------NLIVT--NHEAQ 147 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~------ni~Vt--~~Da~ 147 (732)
+++|.+|||+|||||++|..+++. +.|+|+|+++ .+.. ++..... ++.+. .+|+.
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~------------~~V~gvD~s~-m~~~----a~~~~~~~~~~~~~v~~~~~~~D~~ 134 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR------------PHVMDVRAYT-LGVG----GHEVPRITESYGWNIVKFKSRVDIH 134 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS------------TTEEEEEEEC-CCCS----SCCCCCCCCBTTGGGEEEECSCCTT
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc------------CcEEEEECch-hhhh----hhhhhhhhhccCCCeEEEecccCHh
Confidence 578999999999999999887653 5799999987 3111 1111111 56666 66766
Q ss_pred cCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccC
Q 004759 148 HFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKV 227 (732)
Q Consensus 148 ~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKp 227 (732)
.++ ...||.|+||.. ...|. +.. -+..+.++|..+.++|||
T Consensus 135 ~l~-----------------------~~~fD~V~sd~~-~~~~~----~~~-----------d~~~~l~~L~~~~r~Lkp 175 (265)
T 2oxt_A 135 TLP-----------------------VERTDVIMCDVG-ESSPK----WSV-----------ESERTIKILELLEKWKVK 175 (265)
T ss_dssp TSC-----------------------CCCCSEEEECCC-CCCSC----HHH-----------HHHHHHHHHHHHHHHHHH
T ss_pred HCC-----------------------CCCCcEEEEeCc-ccCCc----cch-----------hHHHHHHHHHHHHHHhcc
Confidence 543 257999999975 22221 110 011123378889999999
Q ss_pred CC--EEEEEcCC
Q 004759 228 GG--RIVYSTCS 237 (732)
Q Consensus 228 GG--rLVYSTCS 237 (732)
|| .+|..+-.
T Consensus 176 GG~~~fv~kv~~ 187 (265)
T 2oxt_A 176 NPSADFVVKVLC 187 (265)
T ss_dssp CTTCEEEEEESC
T ss_pred CCCeEEEEEeCC
Confidence 99 99886543
No 198
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.51 E-value=5.3e-07 Score=94.05 Aligned_cols=113 Identities=14% Similarity=0.048 Sum_probs=82.9
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc----CCCceEEEecccccCCCCc
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl----g~~ni~Vt~~Da~~fp~~~ 153 (732)
.+.+|||+|||.|+.+..++... +...|+++|+|+..++.+++++..+ ..+++.+...|+..+..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~-- 143 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP---------SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIA-- 143 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT---------TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHH--
T ss_pred CCCEEEEECCchHHHHHHHHhCC---------CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh--
Confidence 45799999999999988876531 2479999999999999999987653 24679999999876421
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
.....||.|++|++. ..+. + ..| ...+++..+.++|+|||++|.
T Consensus 144 ------------------~~~~~fD~Ii~d~~~-~~~~----~-----------~~l--~~~~~~~~~~~~L~pgG~lv~ 187 (275)
T 1iy9_A 144 ------------------KSENQYDVIMVDSTE-PVGP----A-----------VNL--FTKGFYAGIAKALKEDGIFVA 187 (275)
T ss_dssp ------------------TCCSCEEEEEESCSS-CCSC----C-----------CCC--STTHHHHHHHHHEEEEEEEEE
T ss_pred ------------------hCCCCeeEEEECCCC-CCCc----c-----------hhh--hHHHHHHHHHHhcCCCcEEEE
Confidence 012579999999874 2121 0 011 124578888999999999999
Q ss_pred EcCC
Q 004759 234 STCS 237 (732)
Q Consensus 234 STCS 237 (732)
.+.+
T Consensus 188 ~~~~ 191 (275)
T 1iy9_A 188 QTDN 191 (275)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8655
No 199
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.51 E-value=4.9e-07 Score=89.91 Aligned_cols=106 Identities=11% Similarity=0.066 Sum_probs=78.3
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..++... ..|+++|+++..+..++.+. +++.+...|+..++.
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~-----------~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~----- 97 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF-----------GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRL----- 97 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH-----------SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCC-----
T ss_pred CCCCeEEEecccCCHHHHHHHHhC-----------CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHccc-----
Confidence 578899999999999999998762 37999999999998887653 457777887765431
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
...||.|+| +. +++...++ .....++|.++.++|||||+++.+++
T Consensus 98 -----------------~~~~D~v~~----~~-~~~~~~~~-------------~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 98 -----------------GRKFSAVVS----MF-SSVGYLKT-------------TEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp -----------------SSCEEEEEE----CT-TGGGGCCS-------------HHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred -----------------CCCCcEEEE----cC-chHhhcCC-------------HHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 257999995 11 12211100 12346789999999999999999877
Q ss_pred CC
Q 004759 237 SM 238 (732)
Q Consensus 237 Sl 238 (732)
..
T Consensus 143 ~~ 144 (239)
T 3bxo_A 143 WF 144 (239)
T ss_dssp CC
T ss_pred cC
Confidence 65
No 200
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.50 E-value=2.5e-07 Score=98.09 Aligned_cols=114 Identities=14% Similarity=0.077 Sum_probs=82.3
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc----CCCceEEEecccccCCCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl----g~~ni~Vt~~Da~~fp~~ 152 (732)
..+.+|||+|||.|..+..++... +.+.|+++|+|+..+..+++++..+ ..+++.+...|+..+..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~- 163 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP---------SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMK- 163 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT---------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH-
T ss_pred CCCCEEEEECCCchHHHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHh-
Confidence 456899999999999998886541 3579999999999999999987663 24678899898866321
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
.....||.|++|++.. .+ +. .+....+++..+.++|+|||+||
T Consensus 164 -------------------~~~~~fD~Ii~d~~~~-~~-------------~~----~~l~~~~~l~~~~~~LkpgG~lv 206 (304)
T 2o07_A 164 -------------------QNQDAFDVIITDSSDP-MG-------------PA----ESLFKESYYQLMKTALKEDGVLC 206 (304)
T ss_dssp -------------------TCSSCEEEEEEECC-----------------------------CHHHHHHHHHEEEEEEEE
T ss_pred -------------------hCCCCceEEEECCCCC-CC-------------cc----hhhhHHHHHHHHHhccCCCeEEE
Confidence 0126799999998721 11 00 01124568889999999999999
Q ss_pred EEcCC
Q 004759 233 YSTCS 237 (732)
Q Consensus 233 YSTCS 237 (732)
..+.+
T Consensus 207 ~~~~~ 211 (304)
T 2o07_A 207 CQGEC 211 (304)
T ss_dssp EEEEC
T ss_pred EecCC
Confidence 87744
No 201
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.50 E-value=3.7e-07 Score=95.14 Aligned_cols=110 Identities=16% Similarity=0.125 Sum_probs=74.3
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
.+.+.++.+|||+|||+|..|..|++. .+.|+|+|+|+.++..+++++... .+ ..+...++.
T Consensus 40 ~l~l~~g~~VLDlGcGtG~~a~~La~~-----------g~~V~gvD~S~~ml~~Ar~~~~~~---~v---~~~~~~~~~- 101 (261)
T 3iv6_A 40 LENIVPGSTVAVIGASTRFLIEKALER-----------GASVTVFDFSQRMCDDLAEALADR---CV---TIDLLDITA- 101 (261)
T ss_dssp TTTCCTTCEEEEECTTCHHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHTSSS---CC---EEEECCTTS-
T ss_pred hcCCCCcCEEEEEeCcchHHHHHHHhc-----------CCEEEEEECCHHHHHHHHHHHHhc---cc---eeeeeeccc-
Confidence 457789999999999999999998874 368999999999999998876543 11 222222111
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
.. .......||.|+++.. +. .|. .......+.+..++| |||+|+
T Consensus 102 ~~---------------~~~~~~~fD~Vv~~~~------l~-------~~~-------~~~~~~~l~~l~~lL-PGG~l~ 145 (261)
T 3iv6_A 102 EI---------------PKELAGHFDFVLNDRL------IN-------RFT-------TEEARRACLGMLSLV-GSGTVR 145 (261)
T ss_dssp CC---------------CGGGTTCCSEEEEESC------GG-------GSC-------HHHHHHHHHHHHHHH-TTSEEE
T ss_pred cc---------------ccccCCCccEEEEhhh------hH-------hCC-------HHHHHHHHHHHHHhC-cCcEEE
Confidence 00 0011257999998542 11 110 123456788888999 999999
Q ss_pred EEcC
Q 004759 233 YSTC 236 (732)
Q Consensus 233 YSTC 236 (732)
.|..
T Consensus 146 lS~~ 149 (261)
T 3iv6_A 146 ASVK 149 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8743
No 202
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.49 E-value=2.1e-07 Score=101.29 Aligned_cols=121 Identities=12% Similarity=0.003 Sum_probs=89.0
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~Vt~~Da~~fp~~ 152 (732)
+...++.+|||+|||+|..+..+++. + ...|+|+|++ ..+..++++++..+..+ +.+...|+..++.
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~-g---------~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 126 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQA-G---------ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL- 126 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHT-T---------CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC-
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhc-C---------CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc-
Confidence 34567899999999999999888775 1 3589999999 99999999999988764 8888888876431
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
...||.|+++....... .. .....++....++|||||+|+
T Consensus 127 ---------------------~~~~D~Iv~~~~~~~l~----~e---------------~~~~~~l~~~~~~LkpgG~li 166 (376)
T 3r0q_C 127 ---------------------PEKVDVIISEWMGYFLL----RE---------------SMFDSVISARDRWLKPTGVMY 166 (376)
T ss_dssp ---------------------SSCEEEEEECCCBTTBT----TT---------------CTHHHHHHHHHHHEEEEEEEE
T ss_pred ---------------------CCcceEEEEcChhhccc----ch---------------HHHHHHHHHHHhhCCCCeEEE
Confidence 16799999965311100 00 112356777889999999999
Q ss_pred EEcCC--CCCcCcHHH
Q 004759 233 YSTCS--MNPVENEAV 246 (732)
Q Consensus 233 YSTCS--lnp~ENEaV 246 (732)
.+.++ +.|.+++..
T Consensus 167 ~~~~~~~~~~~~~~~~ 182 (376)
T 3r0q_C 167 PSHARMWLAPIKSNIA 182 (376)
T ss_dssp SSEEEEEEEEECCTHH
T ss_pred EecCeEEEEeecchHH
Confidence 87666 445565543
No 203
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.48 E-value=1e-07 Score=99.93 Aligned_cols=106 Identities=16% Similarity=0.109 Sum_probs=70.4
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC------ceEEE--ecccc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA------NLIVT--NHEAQ 147 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~------ni~Vt--~~Da~ 147 (732)
+++|.+|||+|||||++|..+++. +.|+|+|+++ .+.. ++..... ++.+. .+|+.
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~------------~~V~gVD~s~-m~~~----a~~~~~~~~~~~~~v~~~~~~~D~~ 142 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ------------PNVREVKAYT-LGTS----GHEKPRLVETFGWNLITFKSKVDVT 142 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS------------TTEEEEEEEC-CCCT----TSCCCCCCCCTTGGGEEEECSCCGG
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc------------CCEEEEECch-hhhh----hhhchhhhhhcCCCeEEEeccCcHh
Confidence 578999999999999999888663 5799999987 3211 1111111 56666 66766
Q ss_pred cCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccC
Q 004759 148 HFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKV 227 (732)
Q Consensus 148 ~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKp 227 (732)
.+| ...||.|+||.. ...|. +.. -+..+.++|..+.++|||
T Consensus 143 ~l~-----------------------~~~fD~Vvsd~~-~~~~~----~~~-----------d~~~~l~~L~~~~r~Lkp 183 (276)
T 2wa2_A 143 KME-----------------------PFQADTVLCDIG-ESNPT----AAV-----------EASRTLTVLNVISRWLEY 183 (276)
T ss_dssp GCC-----------------------CCCCSEEEECCC-CCCSC----HHH-----------HHHHHHHHHHHHHHHHHH
T ss_pred hCC-----------------------CCCcCEEEECCC-cCCCc----hhh-----------hHHHHHHHHHHHHHHhcc
Confidence 543 257999999875 32231 110 011123478888999999
Q ss_pred CC--EEEEEcCC
Q 004759 228 GG--RIVYSTCS 237 (732)
Q Consensus 228 GG--rLVYSTCS 237 (732)
|| ++|..+.+
T Consensus 184 GG~~~~v~~~~~ 195 (276)
T 2wa2_A 184 NQGCGFCVKVLN 195 (276)
T ss_dssp STTCEEEEEESC
T ss_pred CCCcEEEEEeCC
Confidence 99 99886544
No 204
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.48 E-value=4.5e-07 Score=92.58 Aligned_cols=119 Identities=16% Similarity=0.141 Sum_probs=83.1
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHH------HHHHHHHHHHHcCC-CceEEEecc
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQ------RCNLLIHQTKRMCT-ANLIVTNHE 145 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~------Rl~~L~~n~kRlg~-~ni~Vt~~D 145 (732)
.+++.++.+|||++||+|..+..++...+ +.+.|+++|+++. .+..++++++..+. .++.+...|
T Consensus 38 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~g--------~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 38 AWQVKPGEKILEIGCGQGDLSAVLADQVG--------SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHTCCTTCEEEEESCTTSHHHHHHHHHHC--------TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HcCCCCCCEEEEeCCCCCHHHHHHHHHhC--------CCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 45678999999999999999999988753 2479999999997 89999998887776 578888777
Q ss_pred cccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhc
Q 004759 146 AQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLL 225 (732)
Q Consensus 146 a~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lL 225 (732)
.+.... .......||.|++... +...++ . ..++.....++
T Consensus 110 --~~~~~~----------------~~~~~~~fD~v~~~~~------l~~~~~---------------~-~~~~~~~~~l~ 149 (275)
T 3bkx_A 110 --NLSDDL----------------GPIADQHFDRVVLAHS------LWYFAS---------------A-NALALLFKNMA 149 (275)
T ss_dssp --CTTTCC----------------GGGTTCCCSEEEEESC------GGGSSC---------------H-HHHHHHHHHHT
T ss_pred --hhhhcc----------------CCCCCCCEEEEEEccc------hhhCCC---------------H-HHHHHHHHHHh
Confidence 111000 0112367999997432 211111 0 12455555667
Q ss_pred cCCCEEEEEcCCCC
Q 004759 226 KVGGRIVYSTCSMN 239 (732)
Q Consensus 226 KpGGrLVYSTCSln 239 (732)
++||+++.++.+..
T Consensus 150 ~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 150 AVCDHVDVAEWSMQ 163 (275)
T ss_dssp TTCSEEEEEEECSS
T ss_pred CCCCEEEEEEecCC
Confidence 77999999876654
No 205
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.48 E-value=4.1e-07 Score=91.46 Aligned_cols=127 Identities=14% Similarity=0.112 Sum_probs=86.3
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
..+.++.+|||+|||+|..+..++... ..|+++|+++..+..+++++ ...++.+...|+..++...
T Consensus 52 ~~~~~~~~vLD~GcG~G~~~~~la~~~-----------~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~ 117 (245)
T 3ggd_A 52 LLFNPELPLIDFACGNGTQTKFLSQFF-----------PRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAA 117 (245)
T ss_dssp TTSCTTSCEEEETCTTSHHHHHHHHHS-----------SCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHH
T ss_pred hccCCCCeEEEEcCCCCHHHHHHHHhC-----------CCEEEEECCHHHHHHHHHhC---cccCceEEECccccccccc
Confidence 346889999999999999999998762 37999999999998887754 4457888888877643210
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
.......||.|++... +...+ . ....++|.++.++|||||+|+.
T Consensus 118 ----------------~~~~~~~~d~v~~~~~------~~~~~-------~-------~~~~~~l~~~~~~LkpgG~l~i 161 (245)
T 3ggd_A 118 ----------------QIHSEIGDANIYMRTG------FHHIP-------V-------EKRELLGQSLRILLGKQGAMYL 161 (245)
T ss_dssp ----------------HHHHHHCSCEEEEESS------STTSC-------G-------GGHHHHHHHHHHHHTTTCEEEE
T ss_pred ----------------ccccccCccEEEEcch------hhcCC-------H-------HHHHHHHHHHHHHcCCCCEEEE
Confidence 0000134899998532 11111 0 1235689999999999999888
Q ss_pred EcCCCCCcCcHHHHHHHHHH
Q 004759 234 STCSMNPVENEAVVAEILRK 253 (732)
Q Consensus 234 STCSlnp~ENEaVV~~~L~~ 253 (732)
+..+. .+...+..+...
T Consensus 162 ~~~~~---~~~~~~~~~~~~ 178 (245)
T 3ggd_A 162 IELGT---GCIDFFNSLLEK 178 (245)
T ss_dssp EEECT---THHHHHHHHHHH
T ss_pred EeCCc---cccHHHHHHHhC
Confidence 77654 234444444443
No 206
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.46 E-value=3.1e-07 Score=98.01 Aligned_cols=127 Identities=15% Similarity=0.069 Sum_probs=90.2
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~~~ 154 (732)
+.++.+|||+|||+|..+..+++. +.+.|+|+|++ ..+..++++++..+.. ++.+...|+..++.
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~----------g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--- 101 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH----------GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL--- 101 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT----------CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC---
T ss_pred hcCCCEEEEecCccHHHHHHHHHC----------CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC---
Confidence 456889999999999998887764 23689999999 5899999999888875 58888888776431
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
...+||.|+++.+..... +. .....+|..+.++|||||+++.+
T Consensus 102 ------------------~~~~~D~Ivs~~~~~~l~----~~---------------~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 102 ------------------PFPKVDIIISEWMGYFLL----YE---------------SMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp ------------------SSSCEEEEEECCCBTTBS----TT---------------CCHHHHHHHHHHHEEEEEEEESC
T ss_pred ------------------CCCcccEEEEeCchhhcc----cH---------------HHHHHHHHHHHhhcCCCeEEEEe
Confidence 125799999976522210 00 01135677788999999999977
Q ss_pred cCCC--CCcCcHHHHHHHHHH
Q 004759 235 TCSM--NPVENEAVVAEILRK 253 (732)
Q Consensus 235 TCSl--np~ENEaVV~~~L~~ 253 (732)
++++ .+.+........+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~ 165 (328)
T 1g6q_1 145 KCSIHLAGLEDSQYKDEKLNY 165 (328)
T ss_dssp EEEEEEEEECCHHHHHHHHHH
T ss_pred eceEEEEEecCchhhhhhhcc
Confidence 6664 355665544444443
No 207
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.46 E-value=3.8e-07 Score=99.13 Aligned_cols=144 Identities=17% Similarity=0.134 Sum_probs=97.7
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC--------CceEEEecccccC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT--------ANLIVTNHEAQHF 149 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~--------~ni~Vt~~Da~~f 149 (732)
.+.+|||+|+|.|+.+..++.. +...|+++|+|+..+.++++++..++. +++.+...|+..|
T Consensus 188 ~pkrVL~IGgG~G~~arellk~----------~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~ 257 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL----------KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPV 257 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT----------CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHH
Confidence 4679999999999988777553 236899999999999999998654321 2688999998875
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
..- .......||.|++|+|-...|. .| .. ..-......++..+.++|+|||
T Consensus 258 L~~-----------------~~~~~~~fDvII~D~~d~P~~~---~p--------~~-L~t~eFy~~~~~~~~~~L~pgG 308 (364)
T 2qfm_A 258 LKR-----------------YAKEGREFDYVINDLTAVPIST---SP--------EE-DSTWEFLRLILDLSMKVLKQDG 308 (364)
T ss_dssp HHH-----------------HHHHTCCEEEEEEECCSSCCCC---C-------------CHHHHHHHHHHHHHHTEEEEE
T ss_pred HHh-----------------hhccCCCceEEEECCCCcccCc---Cc--------hh-hhHHHHHHHHHHHHHhhCCCCc
Confidence 320 0001367999999997311121 11 11 1113455677778899999999
Q ss_pred EEEEEcCCCCCcCcHHHHHHHHHHCCCcEEE
Q 004759 230 RIVYSTCSMNPVENEAVVAEILRKCEGSVEL 260 (732)
Q Consensus 230 rLVYSTCSlnp~ENEaVV~~~L~~~~~~vel 260 (732)
.+|.-+||.+..|--......|++.-..+..
T Consensus 309 ilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 309 KYFTQGNCVNLTEALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp EEEEEEEETTCHHHHHHHHHHHTTSSSCEEE
T ss_pred EEEEEcCCcchHHHHHHHHHHHHHhCCceEE
Confidence 9999999988744445555556655555655
No 208
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.45 E-value=2.6e-07 Score=99.42 Aligned_cols=117 Identities=12% Similarity=0.085 Sum_probs=85.2
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc--C--CCceEEEecccccCCC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM--C--TANLIVTNHEAQHFPG 151 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl--g--~~ni~Vt~~Da~~fp~ 151 (732)
...+.+|||+|||.|..+..++... +...|+++|+|+..+..+++++.++ + .+++.+...|+..+..
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~---------~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~ 188 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHA---------SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLK 188 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCT---------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHH
Confidence 3456899999999999998887542 3579999999999999999998764 3 3578899998876421
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
......||.|++|++-. .+ +. . +-...+++..+.++|+|||+|
T Consensus 189 -------------------~~~~~~fDlIi~d~~~p-~~-------------~~--~--~l~~~~~l~~~~~~LkpgG~l 231 (334)
T 1xj5_A 189 -------------------NAAEGSYDAVIVDSSDP-IG-------------PA--K--ELFEKPFFQSVARALRPGGVV 231 (334)
T ss_dssp -------------------TSCTTCEEEEEECCCCT-TS-------------GG--G--GGGSHHHHHHHHHHEEEEEEE
T ss_pred -------------------hccCCCccEEEECCCCc-cC-------------cc--h--hhhHHHHHHHHHHhcCCCcEE
Confidence 00125799999997511 01 00 0 111357889999999999999
Q ss_pred EEEcCCC
Q 004759 232 VYSTCSM 238 (732)
Q Consensus 232 VYSTCSl 238 (732)
|..+.+.
T Consensus 232 v~~~~~~ 238 (334)
T 1xj5_A 232 CTQAESL 238 (334)
T ss_dssp EEECCCT
T ss_pred EEecCCc
Confidence 9975553
No 209
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.45 E-value=1.4e-06 Score=90.75 Aligned_cols=131 Identities=16% Similarity=0.104 Sum_probs=77.7
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC-CHHHHHHHHHHH-----HHcCCC-----ceEEEec
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQT-----KRMCTA-----NLIVTNH 144 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi-d~~Rl~~L~~n~-----kRlg~~-----ni~Vt~~ 144 (732)
..++.+|||+|||+|..+..++.. + .+.|+|+|+ ++..+..+++|+ +..+.. ++.+...
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~-~---------~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~ 146 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA-G---------ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPY 146 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT-T---------CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEEC
T ss_pred hcCCCeEEEecccccHHHHHHHHc-C---------CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEe
Confidence 457889999999999998877653 1 358999999 899999999999 444442 5555544
Q ss_pred ccccCCCCccCCCCCCCCccccccccccccccccEEEe-cCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHh
Q 004759 145 EAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLC-DVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGIS 223 (732)
Q Consensus 145 Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~-DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~ 223 (732)
+...... .+ . .......||.|++ |+... ......++....+
T Consensus 147 ~~~~~~~-~~------------~--~~~~~~~fD~Ii~~dvl~~-----------------------~~~~~~ll~~l~~ 188 (281)
T 3bzb_A 147 RWGDSPD-SL------------Q--RCTGLQRFQVVLLADLLSF-----------------------HQAHDALLRSVKM 188 (281)
T ss_dssp CTTSCTH-HH------------H--HHHSCSSBSEEEEESCCSC-----------------------GGGHHHHHHHHHH
T ss_pred cCCCccH-HH------------H--hhccCCCCCEEEEeCcccC-----------------------hHHHHHHHHHHHH
Confidence 3222100 00 0 0001367999987 55411 0113457888888
Q ss_pred hcc---C--CCEEEEEcCCCCCc---CcHHHHHHHHHHCC
Q 004759 224 LLK---V--GGRIVYSTCSMNPV---ENEAVVAEILRKCE 255 (732)
Q Consensus 224 lLK---p--GGrLVYSTCSlnp~---ENEaVV~~~L~~~~ 255 (732)
+|+ | ||+++.+.+...+. ..+.++ ..+++.|
T Consensus 189 ~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~-~~l~~~G 227 (281)
T 3bzb_A 189 LLALPANDPTAVALVTFTHHRPHLAERDLAFF-RLVNADG 227 (281)
T ss_dssp HBCCTTTCTTCEEEEEECC--------CTHHH-HHHHHST
T ss_pred HhcccCCCCCCEEEEEEEeeecccchhHHHHH-HHHHhcC
Confidence 999 9 99876654444332 223333 3555554
No 210
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.45 E-value=3e-07 Score=98.26 Aligned_cols=114 Identities=16% Similarity=0.076 Sum_probs=83.2
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc----CCCceEEEecccccCCCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl----g~~ni~Vt~~Da~~fp~~ 152 (732)
..+.+|||+|||+|+.+..++... +...|+++|+|+..+..+++++..+ ..+++.+...|+..+..
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~- 184 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK---------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE- 184 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT---------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH-
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh-
Confidence 456899999999999998886531 3579999999999999999987653 23578888888765321
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
.....||.|++|++.. .| | . .. -.+.+++..+.++|+|||+++
T Consensus 185 -------------------~~~~~fDvIi~d~~~p-~~-----~--------~--~~--l~~~~~l~~~~~~LkpgG~lv 227 (321)
T 2pt6_A 185 -------------------NVTNTYDVIIVDSSDP-IG-----P--------A--ET--LFNQNFYEKIYNALKPNGYCV 227 (321)
T ss_dssp -------------------HCCSCEEEEEEECCCS-SS-----G--------G--GG--GSSHHHHHHHHHHEEEEEEEE
T ss_pred -------------------hcCCCceEEEECCcCC-CC-----c--------c--hh--hhHHHHHHHHHHhcCCCcEEE
Confidence 0125799999997521 11 1 0 01 112578899999999999999
Q ss_pred EEcCC
Q 004759 233 YSTCS 237 (732)
Q Consensus 233 YSTCS 237 (732)
..+.+
T Consensus 228 ~~~~~ 232 (321)
T 2pt6_A 228 AQCES 232 (321)
T ss_dssp EEECC
T ss_pred EEcCC
Confidence 87654
No 211
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.44 E-value=9.6e-07 Score=92.63 Aligned_cols=119 Identities=13% Similarity=0.091 Sum_probs=82.8
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc-------CCCceEEEecccccC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-------CTANLIVTNHEAQHF 149 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl-------g~~ni~Vt~~Da~~f 149 (732)
.++.+|||+|||+|..+..+++. +...|+++|+++..+..++++.... +..++.+...|+..+
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~----------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 102 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG----------RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKE 102 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc----------CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEeccccc
Confidence 47889999999999999988763 2468999999999999999888765 345788888888765
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
+... +.......||.|++.- ++ .|.... ......+|..+.++|||||
T Consensus 103 ~~~~---------------~~~~~~~~fD~V~~~~------~l--------~~~~~~----~~~~~~~l~~~~~~LkpgG 149 (313)
T 3bgv_A 103 LLID---------------KFRDPQMCFDICSCQF------VC--------HYSFES----YEQADMMLRNACERLSPGG 149 (313)
T ss_dssp CSTT---------------TCSSTTCCEEEEEEET------CG--------GGGGGS----HHHHHHHHHHHHTTEEEEE
T ss_pred chhh---------------hcccCCCCEEEEEEec------ch--------hhccCC----HHHHHHHHHHHHHHhCCCc
Confidence 4100 0001124799999731 11 111000 1234578999999999999
Q ss_pred EEEEEcCCC
Q 004759 230 RIVYSTCSM 238 (732)
Q Consensus 230 rLVYSTCSl 238 (732)
+++.+|...
T Consensus 150 ~li~~~~~~ 158 (313)
T 3bgv_A 150 YFIGTTPNS 158 (313)
T ss_dssp EEEEEEECH
T ss_pred EEEEecCCh
Confidence 999987653
No 212
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.44 E-value=3.5e-06 Score=90.37 Aligned_cols=110 Identities=18% Similarity=0.161 Sum_probs=84.3
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~ 152 (732)
+++.++.+|||+|||+|..+..+++.. |...++++|+ +..+..+++++...+.. ++.+..+|... + +
T Consensus 178 ~~~~~~~~vlDvG~G~G~~~~~l~~~~---------~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~ 245 (374)
T 1qzz_A 178 YDWSAVRHVLDVGGGNGGMLAAIALRA---------PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-P-L 245 (374)
T ss_dssp SCCTTCCEEEEETCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C-C
T ss_pred CCCCCCCEEEEECCCcCHHHHHHHHHC---------CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-c-C
Confidence 466789999999999999999998873 3578999999 99999999999888875 78888887653 1 0
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
...||.|++.- ++ ..|.. ....++|+++.++|||||+|+
T Consensus 246 ---------------------~~~~D~v~~~~------vl-------~~~~~-------~~~~~~l~~~~~~L~pgG~l~ 284 (374)
T 1qzz_A 246 ---------------------PVTADVVLLSF------VL-------LNWSD-------EDALTILRGCVRALEPGGRLL 284 (374)
T ss_dssp ---------------------SCCEEEEEEES------CG-------GGSCH-------HHHHHHHHHHHHHEEEEEEEE
T ss_pred ---------------------CCCCCEEEEec------cc-------cCCCH-------HHHHHHHHHHHHhcCCCcEEE
Confidence 02399999832 11 11211 123578999999999999999
Q ss_pred EEcC
Q 004759 233 YSTC 236 (732)
Q Consensus 233 YSTC 236 (732)
.+..
T Consensus 285 i~e~ 288 (374)
T 1qzz_A 285 VLDR 288 (374)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8766
No 213
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.44 E-value=4.7e-07 Score=94.17 Aligned_cols=120 Identities=11% Similarity=0.091 Sum_probs=77.8
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEE--EEEeCCHHHHHHHHHHHHHc-CCCceEEE--ecccccCC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMV--IANDLDVQRCNLLIHQTKRM-CTANLIVT--NHEAQHFP 150 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~V--vAnDid~~Rl~~L~~n~kRl-g~~ni~Vt--~~Da~~fp 150 (732)
+.++.+|||+|||+|..|..++..+... .+...| +++|.|+.++..+++++... +..++.+. ..++..++
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~-----~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~ 124 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQ-----YPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQ 124 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHH-----STTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhh-----CCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhh
Confidence 4678899999999999888777665431 124544 99999999999999887654 45565544 33332221
Q ss_pred CCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCE
Q 004759 151 GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR 230 (732)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGr 230 (732)
.- + ........||.|++- .++..-+| ..+.|++..++|||||+
T Consensus 125 ~~-------------~--~~~~~~~~fD~V~~~------~~l~~~~d----------------~~~~l~~~~r~LkpgG~ 167 (292)
T 2aot_A 125 SR-------------M--LEKKELQKWDFIHMI------QMLYYVKD----------------IPATLKFFHSLLGTNAK 167 (292)
T ss_dssp HH-------------H--HTTTCCCCEEEEEEE------SCGGGCSC----------------HHHHHHHHHHTEEEEEE
T ss_pred hh-------------h--ccccCCCceeEEEEe------eeeeecCC----------------HHHHHHHHHHHcCCCcE
Confidence 00 0 000123679999972 11211111 24578999999999999
Q ss_pred EEEEcCC
Q 004759 231 IVYSTCS 237 (732)
Q Consensus 231 LVYSTCS 237 (732)
++.++.+
T Consensus 168 l~i~~~~ 174 (292)
T 2aot_A 168 MLIIVVS 174 (292)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9988544
No 214
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.44 E-value=6.1e-07 Score=92.15 Aligned_cols=117 Identities=16% Similarity=0.000 Sum_probs=74.1
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC------------------
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT------------------ 136 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~------------------ 136 (732)
...+|.+|||++||+|..+..++.. ....|+|+|+|+..+..++++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~----------~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~ 121 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD----------SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNS 121 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG----------TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCG
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh----------hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCC
Confidence 4567899999999999876654432 125799999999999999887654210
Q ss_pred -----------CceE-EEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhccc
Q 004759 137 -----------ANLI-VTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNV 204 (732)
Q Consensus 137 -----------~ni~-Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~ 204 (732)
.++. +..+|......+. ......||.|++- .++... .
T Consensus 122 ~~~~~~~~~~~~~i~~~~~~D~~~~~~~~-----------------~~~~~~fD~V~~~------~~l~~i--------~ 170 (263)
T 2a14_A 122 GRWEEKEEKLRAAVKRVLKCDVHLGNPLA-----------------PAVLPLADCVLTL------LAMECA--------C 170 (263)
T ss_dssp GGHHHHHHHHHHHEEEEEECCTTSSSTTT-----------------TCCCCCEEEEEEE------SCHHHH--------C
T ss_pred cchhhHHHHHHhhhheEEeccccCCCCCC-----------------ccccCCCCEeeeh------HHHHHh--------c
Confidence 1122 5566655421100 0112579999971 111000 0
Q ss_pred ccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 205 GLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 205 ~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
.. .....++|.+..++|||||+++.++.
T Consensus 171 ---~~-~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 171 ---CS-LDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp ---SS-HHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ---CC-HHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 00 12235689999999999999999964
No 215
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.43 E-value=3.5e-07 Score=96.70 Aligned_cols=133 Identities=14% Similarity=0.065 Sum_probs=90.3
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc----CCCceEEEecccccCCCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl----g~~ni~Vt~~Da~~fp~~ 152 (732)
.++.+|||+|||.|+.+..++... +.+.|+++|+|+..+..+++++..+ ..+++.+...|+..++..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 164 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG---------TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQ 164 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT---------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHS
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHh
Confidence 567899999999999998887541 2479999999999999999887432 346788999988765320
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
.....||.|++|.+... + +. . +-.+.++++.+.++|||||+|+
T Consensus 165 -------------------~~~~~fDvIi~d~~~~~-~-------------~~--~--~l~~~~~l~~~~~~LkpgG~lv 207 (304)
T 3bwc_A 165 -------------------TPDNTYDVVIIDTTDPA-G-------------PA--S--KLFGEAFYKDVLRILKPDGICC 207 (304)
T ss_dssp -------------------SCTTCEEEEEEECC---------------------------CCHHHHHHHHHHEEEEEEEE
T ss_pred -------------------ccCCceeEEEECCCCcc-c-------------cc--h--hhhHHHHHHHHHHhcCCCcEEE
Confidence 01267999999976210 1 00 0 0113578889999999999999
Q ss_pred EEcCCC-CCcCcHHHHHHHHHHCC
Q 004759 233 YSTCSM-NPVENEAVVAEILRKCE 255 (732)
Q Consensus 233 YSTCSl-np~ENEaVV~~~L~~~~ 255 (732)
..+.+. ...+...-+.+.|++.|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~~G 231 (304)
T 3bwc_A 208 NQGESIWLDLELIEKMSRFIRETG 231 (304)
T ss_dssp EEECCTTTCHHHHHHHHHHHHHHT
T ss_pred EecCCcccchHHHHHHHHHHHhCC
Confidence 875442 22223344555566554
No 216
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.41 E-value=2.6e-07 Score=92.40 Aligned_cols=107 Identities=11% Similarity=0.026 Sum_probs=77.7
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCCCccC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~~~~ 155 (732)
.+.++|||++||.|..+..++.. .|...|+|+|+|...++.+++++.++|.. ++.+ .|...
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~---------~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~------- 109 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNE---------NEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKES------- 109 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCS---------SCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHH-------
T ss_pred CCCCeEEEecCCCCHHHHHHHhc---------CCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccc-------
Confidence 56789999999999988877543 24569999999999999999999999987 5666 33221
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE-EE
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV-YS 234 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV-YS 234 (732)
......||.||+ -+...+...+...+.+.++.|+|||.+| +=
T Consensus 110 ---------------~~~~~~~DvVLa----------------------~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 110 ---------------DVYKGTYDVVFL----------------------LKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp ---------------HHTTSEEEEEEE----------------------ETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred ---------------cCCCCCcChhhH----------------------hhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 112367999997 1112222344456779999999998877 33
Q ss_pred cCCC
Q 004759 235 TCSM 238 (732)
Q Consensus 235 TCSl 238 (732)
|-|+
T Consensus 153 tksl 156 (200)
T 3fzg_A 153 IKSL 156 (200)
T ss_dssp CCCC
T ss_pred hHHh
Confidence 5555
No 217
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.41 E-value=5.3e-07 Score=95.79 Aligned_cols=140 Identities=16% Similarity=0.114 Sum_probs=92.1
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc-----CCCceEEEecccccCCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-----CTANLIVTNHEAQHFPG 151 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl-----g~~ni~Vt~~Da~~fp~ 151 (732)
..+.+|||+|||.|+.+..++... +.+.|+++|+|+..+..+++++..+ ..+++.+...|+..+..
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~ 146 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP---------TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLE 146 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST---------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC---------CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHH
Confidence 345799999999999988886642 2479999999999999999987652 24678999998876421
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
.....||.|++|++... + . ..| ...+ ...+++..+.++|||||+|
T Consensus 147 --------------------~~~~~fD~Ii~d~~~~~-~-~-~~~----------~~~l--~~~~~l~~~~~~LkpgG~l 191 (314)
T 1uir_A 147 --------------------RTEERYDVVIIDLTDPV-G-E-DNP----------ARLL--YTVEFYRLVKAHLNPGGVM 191 (314)
T ss_dssp --------------------HCCCCEEEEEEECCCCB-S-T-TCG----------GGGG--SSHHHHHHHHHTEEEEEEE
T ss_pred --------------------hcCCCccEEEECCCCcc-c-c-cCc----------chhc--cHHHHHHHHHHhcCCCcEE
Confidence 01257999999976321 0 0 000 0011 1356788999999999999
Q ss_pred EEEcCCCC--CcCcHHHHHHHHHHCCCcEEE
Q 004759 232 VYSTCSMN--PVENEAVVAEILRKCEGSVEL 260 (732)
Q Consensus 232 VYSTCSln--p~ENEaVV~~~L~~~~~~vel 260 (732)
+..+.+.. ..+.-.-+.+.|++.-..+.+
T Consensus 192 v~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 222 (314)
T 1uir_A 192 GMQTGMILLTHHRVHPVVHRTVREAFRYVRS 222 (314)
T ss_dssp EEEEEEECC---CHHHHHHHHHHTTCSEEEE
T ss_pred EEEccCccccCHHHHHHHHHHHHHHCCceEE
Confidence 98755432 112223334455554333433
No 218
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.41 E-value=4.4e-07 Score=102.16 Aligned_cols=121 Identities=13% Similarity=0.128 Sum_probs=88.5
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCCc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~~ 153 (732)
...++.+|||+|||+|..+..+++. +...|+|+|+++ .+..+++++++++. .++.+..+|+..++.
T Consensus 155 ~~~~~~~VLDiGcGtG~la~~la~~----------~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~-- 221 (480)
T 3b3j_A 155 TDFKDKIVLDVGCGSGILSFFAAQA----------GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-- 221 (480)
T ss_dssp GGTTTCEEEEESCSTTHHHHHHHHT----------TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC--
T ss_pred hhcCCCEEEEecCcccHHHHHHHHc----------CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc--
Confidence 4567899999999999998877663 246999999998 88999999999987 579999988766421
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
...||+|+++++ +. . |. ......++..+.++|||||+|+.
T Consensus 222 --------------------~~~fD~Ivs~~~----~~------~---~~-------~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 222 --------------------PEQVDIIISEPM----GY------M---LF-------NERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp --------------------SSCEEEEECCCC----HH------H---HT-------CHHHHHHHHHGGGGEEEEEEEES
T ss_pred --------------------CCCeEEEEEeCc----hH------h---cC-------cHHHHHHHHHHHHhcCCCCEEEE
Confidence 147999998654 11 0 10 01234566788899999999996
Q ss_pred EcCCC--CCcCcHHHHH
Q 004759 234 STCSM--NPVENEAVVA 248 (732)
Q Consensus 234 STCSl--np~ENEaVV~ 248 (732)
+.+++ .|++.+....
T Consensus 262 ~~~~~~~~pi~~~~l~~ 278 (480)
T 3b3j_A 262 TIGDVHLAPFTDEQLYM 278 (480)
T ss_dssp CEEEEEEEEECCHHHHH
T ss_pred EeceeeeeccCchHHHH
Confidence 65553 4566665543
No 219
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.40 E-value=2.8e-07 Score=94.22 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=75.6
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
+.+.++.+|||+|||+|..+..+++. .+.|+++|+++..+..++.+. ++.+...|+..+|.
T Consensus 30 ~~~~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~~-- 90 (261)
T 3ege_A 30 LNLPKGSVIADIGAGTGGYSVALANQ-----------GLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLAL-- 90 (261)
T ss_dssp HCCCTTCEEEEETCTTSHHHHHHHTT-----------TCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCCS--
T ss_pred hCCCCCCEEEEEcCcccHHHHHHHhC-----------CCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCCC--
Confidence 45678999999999999999988752 479999999997776443322 78888888876441
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
....||.|++... +..- ....++|.++.++|| ||+++.
T Consensus 91 -------------------~~~~fD~v~~~~~------l~~~----------------~~~~~~l~~~~~~Lk-gG~~~~ 128 (261)
T 3ege_A 91 -------------------PDKSVDGVISILA------IHHF----------------SHLEKSFQEMQRIIR-DGTIVL 128 (261)
T ss_dssp -------------------CTTCBSEEEEESC------GGGC----------------SSHHHHHHHHHHHBC-SSCEEE
T ss_pred -------------------CCCCEeEEEEcch------Hhhc----------------cCHHHHHHHHHHHhC-CcEEEE
Confidence 1267999998321 1111 112468999999999 998888
Q ss_pred EcCC
Q 004759 234 STCS 237 (732)
Q Consensus 234 STCS 237 (732)
.++.
T Consensus 129 ~~~~ 132 (261)
T 3ege_A 129 LTFD 132 (261)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 8765
No 220
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.40 E-value=7.5e-07 Score=90.61 Aligned_cols=104 Identities=13% Similarity=0.153 Sum_probs=76.4
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..++.. ...|+++|+++..+..+++++ .++.+...|+..++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~----- 107 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS-----------FGTVEGLELSADMLAIARRRN-----PDAVLHHGDMRDFSL----- 107 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT-----------SSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTCCC-----
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc-----------CCeEEEEECCHHHHHHHHhhC-----CCCEEEECChHHCCc-----
Confidence 46789999999999999888654 258999999999998887753 267788888776542
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
...||.|+|.. +++..-++ .....++|.++.++|||||+|+.++.
T Consensus 108 -----------------~~~fD~v~~~~-----~~l~~~~~-------------~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 108 -----------------GRRFSAVTCMF-----SSIGHLAG-------------QAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp -----------------SCCEEEEEECT-----TGGGGSCH-------------HHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred -----------------cCCcCEEEEcC-----chhhhcCC-------------HHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 26799999732 12211110 12345789999999999999998744
No 221
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.39 E-value=3.4e-07 Score=94.86 Aligned_cols=103 Identities=14% Similarity=0.061 Sum_probs=74.8
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
.+.+|||++||+|..|..|++. ...|+|+|+|+.++..++ ..+++.+...++..+|.
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~-----------~~~v~gvD~s~~ml~~a~------~~~~v~~~~~~~e~~~~------ 95 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF-----------FERVHAVDPGEAQIRQAL------RHPRVTYAVAPAEDTGL------ 95 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT-----------CSEEEEEESCHHHHHTCC------CCTTEEEEECCTTCCCC------
T ss_pred CCCCEEEEcCCCCHHHHHHHHh-----------CCEEEEEeCcHHhhhhhh------hcCCceeehhhhhhhcc------
Confidence 4579999999999999888764 368999999998876442 13678888888876542
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 237 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS 237 (732)
....||.|+|- .++ .|-. ..+.+..+.++|||||+|+..+.+
T Consensus 96 ---------------~~~sfD~v~~~------~~~--------h~~~---------~~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 96 ---------------PPASVDVAIAA------QAM--------HWFD---------LDRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp ---------------CSSCEEEEEEC------SCC--------TTCC---------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---------------cCCcccEEEEe------eeh--------hHhh---------HHHHHHHHHHHcCCCCEEEEEECC
Confidence 23689999971 111 1210 124678889999999999988877
Q ss_pred CCCc
Q 004759 238 MNPV 241 (732)
Q Consensus 238 lnp~ 241 (732)
....
T Consensus 138 ~~~~ 141 (257)
T 4hg2_A 138 LTRV 141 (257)
T ss_dssp CCBC
T ss_pred CCCC
Confidence 6544
No 222
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.38 E-value=9.1e-07 Score=89.32 Aligned_cols=135 Identities=14% Similarity=0.014 Sum_probs=86.7
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-------------------
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT------------------- 136 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~------------------- 136 (732)
..++.+|||++||+|..+..++.. ..+.|+++|+++..+..+++++...+.
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~----------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACE----------SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRM 123 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGG----------TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCS
T ss_pred ccCCCEEEEECCCccHHHHHHhhc----------ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhccccccc
Confidence 457889999999999988877643 125899999999999999887654321
Q ss_pred ----------Cce-EEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccc
Q 004759 137 ----------ANL-IVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVG 205 (732)
Q Consensus 137 ----------~ni-~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~ 205 (732)
.++ .+...|+...+... ......||.|++-- ++. .
T Consensus 124 ~~~~~~~~l~~~v~~~~~~d~~~~~~~~-----------------~~~~~~fD~v~~~~------~l~-------~---- 169 (265)
T 2i62_A 124 KGPEKEEKLRRAIKQVLKCDVTQSQPLG-----------------GVSLPPADCLLSTL------CLD-------A---- 169 (265)
T ss_dssp CHHHHHHHHHHHEEEEEECCTTSSSTTT-----------------TCCCCCEEEEEEES------CHH-------H----
T ss_pred chHHHHHHhhhhheeEEEeeeccCCCCC-----------------ccccCCccEEEEhh------hhh-------h----
Confidence 015 67777776542110 01126799999721 110 0
Q ss_pred cccchHHHHHHHHHHHHhhccCCCEEEEEcCCC------------CCcCcHHHHHHHHHHCC
Q 004759 206 LGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM------------NPVENEAVVAEILRKCE 255 (732)
Q Consensus 206 ~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSl------------np~ENEaVV~~~L~~~~ 255 (732)
...-......+|.++.++|||||+|+.++..- ...-+++-+..+|++.|
T Consensus 170 -~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 230 (265)
T 2i62_A 170 -ACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAG 230 (265)
T ss_dssp -HCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTT
T ss_pred -hcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCC
Confidence 00011245678999999999999999876321 01124555666676665
No 223
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.38 E-value=4.6e-07 Score=96.94 Aligned_cols=137 Identities=12% Similarity=0.055 Sum_probs=92.1
Q ss_pred CEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCCC
Q 004759 80 HFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFS 159 (732)
Q Consensus 80 ~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~~ 159 (732)
.+|||+|||.|+.+..++... |...|+++|+|+..+..+++++.....+++.+...|+..|..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~---------p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~-------- 153 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY---------PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAE-------- 153 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS---------TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHH--------
T ss_pred CEEEEEECCcCHHHHHHHHHC---------CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHh--------
Confidence 499999999999999988763 346899999999999999887644345679999999877521
Q ss_pred CCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCC
Q 004759 160 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 239 (732)
Q Consensus 160 ~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSln 239 (732)
......||.|++|++.. .+. |. +-...+.++.+.++|+|||+||..+.+-.
T Consensus 154 -----------~~~~~~fDvIi~D~~~~-~~~----~~-------------~L~t~efl~~~~r~LkpgGvlv~~~~~~~ 204 (317)
T 3gjy_A 154 -----------SFTPASRDVIIRDVFAG-AIT----PQ-------------NFTTVEFFEHCHRGLAPGGLYVANCGDHS 204 (317)
T ss_dssp -----------TCCTTCEEEEEECCSTT-SCC----CG-------------GGSBHHHHHHHHHHEEEEEEEEEEEEECT
T ss_pred -----------hccCCCCCEEEECCCCc-ccc----ch-------------hhhHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 01126799999997532 121 10 11124678889999999999998876543
Q ss_pred CcCcHHHHHHHHHHCCCcEEEEe
Q 004759 240 PVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 240 p~ENEaVV~~~L~~~~~~velvd 262 (732)
+.+.-.-+.+.|++.-..+.++.
T Consensus 205 ~~~~~~~~~~tL~~vF~~v~~~~ 227 (317)
T 3gjy_A 205 DLRGAKSELAGMMEVFEHVAVIA 227 (317)
T ss_dssp TCHHHHHHHHHHHHHCSEEEEEE
T ss_pred chHHHHHHHHHHHHHCCceEEEE
Confidence 22211223334444333455543
No 224
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.37 E-value=1.8e-06 Score=98.39 Aligned_cols=176 Identities=15% Similarity=0.104 Sum_probs=112.7
Q ss_pred cccCcEEEccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCC----CCCCeEEEEEeCCHHHHHHHHHH
Q 004759 55 NEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPG----ALPNGMVIANDLDVQRCNLLIHQ 130 (732)
Q Consensus 55 ~~~G~i~~Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~----~~p~G~VvAnDid~~Rl~~L~~n 130 (732)
.+.|.++--..++.+.+.++++++|++|+|-|||+|+..+++++.+....... ......+++.|+++..+.+++-|
T Consensus 194 g~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mN 273 (530)
T 3ufb_A 194 GDSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMN 273 (530)
T ss_dssp SSCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHH
T ss_pred CcCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHH
Confidence 35677776666677777889999999999999999999999988876421100 00124699999999999988888
Q ss_pred HHHcCCCceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccch
Q 004759 131 TKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGL 210 (732)
Q Consensus 131 ~kRlg~~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L 210 (732)
+--.|...-.+..+|...+|... .....+||.||.+||.++... .+.+.++... ...
T Consensus 274 l~lhg~~~~~I~~~dtL~~~~~~-----------------~~~~~~fD~Il~NPPf~~~~~----~~~~~~~~~~--~~~ 330 (530)
T 3ufb_A 274 LLLHGLEYPRIDPENSLRFPLRE-----------------MGDKDRVDVILTNPPFGGEEE----KGILGNFPED--MQT 330 (530)
T ss_dssp HHHHTCSCCEEECSCTTCSCGGG-----------------CCGGGCBSEEEECCCSSCBCC----HHHHTTSCGG--GCC
T ss_pred HHhcCCccccccccccccCchhh-----------------hcccccceEEEecCCCCcccc----ccccccCchh--ccc
Confidence 87777655556666655443210 112367999999999976431 2222221111 111
Q ss_pred HHHHHHHHHHHHhhcc-------CCCEEEEEcC--CCCCcCcHHHHHHHHHH
Q 004759 211 HSLQVQIAMRGISLLK-------VGGRIVYSTC--SMNPVENEAVVAEILRK 253 (732)
Q Consensus 211 ~~lQ~~IL~rAl~lLK-------pGGrLVYSTC--Slnp~ENEaVV~~~L~~ 253 (732)
...+...+.+++++|| +||++++.+- .|...-.+.-+.+.|-+
T Consensus 331 ~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle 382 (530)
T 3ufb_A 331 AETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLK 382 (530)
T ss_dssp CBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchHHHHHHHHhh
Confidence 2344556677777776 7999887754 24332334445555543
No 225
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.36 E-value=5.7e-07 Score=95.91 Aligned_cols=137 Identities=15% Similarity=0.005 Sum_probs=89.2
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc--C--CCceEEEecccccCCCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM--C--TANLIVTNHEAQHFPGC 152 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl--g--~~ni~Vt~~Da~~fp~~ 152 (732)
..+.+|||+|||.|+.+..++... +.+.|+++|+|+..+..+++++..+ + .+++.+...|+..+..
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~---------~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~- 176 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE---------SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLK- 176 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT---------TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHH-
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHH-
Confidence 345799999999999998887642 3579999999999999999987654 2 3578888888866321
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
.....||.|++|++.. .+ +. -+-...+++..+.++|+|||+|+
T Consensus 177 -------------------~~~~~fD~Ii~d~~~~-~~-------------~~----~~l~t~~~l~~~~~~LkpgG~lv 219 (314)
T 2b2c_A 177 -------------------NHKNEFDVIITDSSDP-VG-------------PA----ESLFGQSYYELLRDALKEDGILS 219 (314)
T ss_dssp -------------------HCTTCEEEEEECCC-------------------------------HHHHHHHHEEEEEEEE
T ss_pred -------------------hcCCCceEEEEcCCCC-CC-------------cc----hhhhHHHHHHHHHhhcCCCeEEE
Confidence 0126799999998621 11 00 01123678899999999999999
Q ss_pred EEcCCCCC-cCcHHHHHHHHHHCCCcEEE
Q 004759 233 YSTCSMNP-VENEAVVAEILRKCEGSVEL 260 (732)
Q Consensus 233 YSTCSlnp-~ENEaVV~~~L~~~~~~vel 260 (732)
..+.+... .+.-..+.+.+++.-..+.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~l~~vF~~v~~ 248 (314)
T 2b2c_A 220 SQGESVWLHLPLIAHLVAFNRKIFPAVTY 248 (314)
T ss_dssp EECCCTTTCHHHHHHHHHHHHHHCSEEEE
T ss_pred EECCCcccCHHHHHHHHHHHHHHCCcceE
Confidence 98755332 11222334445543333444
No 226
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.35 E-value=8.1e-06 Score=85.89 Aligned_cols=111 Identities=16% Similarity=0.086 Sum_probs=84.4
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCCCccC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~~~~ 155 (732)
.++.+|||+|||+|..+..+++.. |...++++|++ ..+..+++++.+.+.. ++.+..+|....+.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---- 229 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHN---------PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY---- 229 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHC---------TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC----
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC---------CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC----
Confidence 788999999999999999998874 35799999999 9999999999888875 58888888765321
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
...||.|++-- . ...|. .....++|+++.++|+|||+|+...
T Consensus 230 ------------------~~~~D~v~~~~------~-------l~~~~-------~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 230 ------------------GNDYDLVLLPN------F-------LHHFD-------VATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp ------------------CSCEEEEEEES------C-------GGGSC-------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCcEEEEcc------h-------hccCC-------HHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 13499999821 1 11121 1234678999999999999998876
Q ss_pred CCCC
Q 004759 236 CSMN 239 (732)
Q Consensus 236 CSln 239 (732)
....
T Consensus 272 ~~~~ 275 (335)
T 2r3s_A 272 FIPN 275 (335)
T ss_dssp CCCC
T ss_pred ecCC
Confidence 6554
No 227
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.34 E-value=5.8e-07 Score=105.97 Aligned_cols=192 Identities=13% Similarity=0.018 Sum_probs=108.9
Q ss_pred HHHHHhhcc-cccCcEEEccccccchhhh----cC--CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEe
Q 004759 46 RFHKFLKLE-NEIGNITRQEAVSMVPPLF----LD--VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIAND 118 (732)
Q Consensus 46 ~~~~~l~~~-~~~G~i~~Qd~~Smlp~ll----Ld--~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnD 118 (732)
.++.|.... ...|.++--...+.+.+.+ +. ..++.+|||.|||+|+..+.++..+... ....++|+|
T Consensus 282 ll~eya~k~Rkk~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei------~~~~IyGvE 355 (878)
T 3s1s_A 282 LIHDIATRGRGHEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNV------MPRQIWAND 355 (878)
T ss_dssp HHHHHHTTSCCCCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTC------CGGGEEEEC
T ss_pred HHHHHHHHhCCcCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhccc------CCCeEEEEE
Confidence 345554433 3456655444433333333 32 3468999999999999999888765321 135799999
Q ss_pred CCHHHHHHH--HHHHHH----cCCCceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCcc
Q 004759 119 LDVQRCNLL--IHQTKR----MCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 192 (732)
Q Consensus 119 id~~Rl~~L--~~n~kR----lg~~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtl 192 (732)
+++..+.++ +.++.. .+..+..+...|..... ......||.|+++||.++....
T Consensus 356 IDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~--------------------~~~~~kFDVVIgNPPYg~~~~~ 415 (878)
T 3s1s_A 356 IETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLN--------------------PEDFANVSVVVMNPPYVSGVTD 415 (878)
T ss_dssp SCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCC--------------------GGGGTTEEEEEECCBCCSSCCC
T ss_pred CCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccc--------------------ccccCCCCEEEECCCccccccc
Confidence 999999988 444432 12223233333322210 1123679999999999764432
Q ss_pred ccC-hhhhhhcc------cccccchHHHHHHHHHHHHhhccCCCEEEEEcCC-CCC--cCcHHHHHHHHHHCCCcEEEEe
Q 004759 193 RKA-PDIWRKWN------VGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS-MNP--VENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 193 rk~-pd~w~~ws------~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS-lnp--~ENEaVV~~~L~~~~~~velvd 262 (732)
... .+...++. +....+...+...++.+|+++|++||++++.+-+ +.- .....-+.+.|-+...-..+++
T Consensus 416 ~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkLRk~LLe~~~I~aIId 495 (878)
T 3s1s_A 416 PAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNFGLEHIFL 495 (878)
T ss_dssp HHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHHHHHHHTTTTCEEEEEE
T ss_pred hhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHHHHHHHHhCCCeEEEEE
Confidence 211 11111110 1111222346778999999999999999987544 221 1124555665554433344555
Q ss_pred c
Q 004759 263 V 263 (732)
Q Consensus 263 ~ 263 (732)
+
T Consensus 496 L 496 (878)
T 3s1s_A 496 Y 496 (878)
T ss_dssp C
T ss_pred C
Confidence 4
No 228
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.34 E-value=4.5e-07 Score=100.23 Aligned_cols=83 Identities=10% Similarity=0.073 Sum_probs=67.7
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc--CCCceEEEecccccCCCCcc
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM--CTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl--g~~ni~Vt~~Da~~fp~~~~ 154 (732)
.+|.+|||+|||+|..+..++.. .+.|+|+|+|+.++.++++|++++ |..++.+.+.|+..+...
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~-----------g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~-- 158 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK-----------ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPL-- 158 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT-----------CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHH--
T ss_pred CCCCEEEEeCCCchHHHHHHHhc-----------CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhh--
Confidence 35899999999999999887654 368999999999999999999998 888899999998764210
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCC
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 189 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGd 189 (732)
.....||.|++|||..+.
T Consensus 159 -----------------~~~~~fDvV~lDPPrr~~ 176 (410)
T 3ll7_A 159 -----------------IKTFHPDYIYVDPARRSG 176 (410)
T ss_dssp -----------------HHHHCCSEEEECCEEC--
T ss_pred -----------------ccCCCceEEEECCCCcCC
Confidence 012479999999997764
No 229
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.33 E-value=9.4e-07 Score=86.61 Aligned_cols=100 Identities=16% Similarity=0.108 Sum_probs=73.7
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
++.+|||+|||+|..+..+ . ...|+++|+++..+..++++. .++.+...|+..+|.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~--------~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~------ 91 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----P--------YPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPF------ 91 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----C--------CSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCS------
T ss_pred CCCeEEEECCCCCHhHHhC-----C--------CCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCC------
Confidence 7889999999999987765 1 138999999999998877754 567777777766431
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 237 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS 237 (732)
....||.|++.. ++...+ ...++|..+.++|||||+++.++..
T Consensus 92 ---------------~~~~fD~v~~~~------~l~~~~----------------~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 92 ---------------PGESFDVVLLFT------TLEFVE----------------DVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp ---------------CSSCEEEEEEES------CTTTCS----------------CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---------------CCCcEEEEEEcC------hhhhcC----------------CHHHHHHHHHHHcCCCCEEEEEecC
Confidence 125799999742 221111 1246889999999999999998754
Q ss_pred C
Q 004759 238 M 238 (732)
Q Consensus 238 l 238 (732)
-
T Consensus 135 ~ 135 (211)
T 2gs9_A 135 A 135 (211)
T ss_dssp T
T ss_pred C
Confidence 3
No 230
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.33 E-value=1.6e-05 Score=84.10 Aligned_cols=112 Identities=14% Similarity=0.048 Sum_probs=84.5
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCCc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~~ 153 (732)
+..++.+|||++||+|..+..+++.. |...++++|+ +..+..+++++...+. .++.+..+|... + +
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~- 232 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAH---------EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-P-L- 232 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C-C-
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHC---------CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-C-C-
Confidence 45667899999999999999998874 3568999999 9999999999888876 578888887642 1 0
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
...||.|++- . ++..|.. ..+.++|+++.+.|||||+|+.
T Consensus 233 --------------------p~~~D~v~~~------~-------vlh~~~~-------~~~~~~l~~~~~~L~pgG~l~i 272 (332)
T 3i53_A 233 --------------------PAGAGGYVLS------A-------VLHDWDD-------LSAVAILRRCAEAAGSGGVVLV 272 (332)
T ss_dssp --------------------CCSCSEEEEE------S-------CGGGSCH-------HHHHHHHHHHHHHHTTTCEEEE
T ss_pred --------------------CCCCcEEEEe------h-------hhccCCH-------HHHHHHHHHHHHhcCCCCEEEE
Confidence 0269999971 1 1222221 2357899999999999999998
Q ss_pred EcCCCC
Q 004759 234 STCSMN 239 (732)
Q Consensus 234 STCSln 239 (732)
....+.
T Consensus 273 ~e~~~~ 278 (332)
T 3i53_A 273 IEAVAG 278 (332)
T ss_dssp EECCCC
T ss_pred EeecCC
Confidence 765543
No 231
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.30 E-value=1.1e-05 Score=86.03 Aligned_cols=111 Identities=17% Similarity=0.137 Sum_probs=84.1
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~ 152 (732)
+++.++.+|||+|||+|..+..+++.. +...++++|+ +..+..+++++...+.. ++.+..+|.... +
T Consensus 179 ~~~~~~~~vLDvG~G~G~~~~~l~~~~---------~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~ 246 (360)
T 1tw3_A 179 YDWTNVRHVLDVGGGKGGFAAAIARRA---------PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP--L 246 (360)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC--C
T ss_pred CCCccCcEEEEeCCcCcHHHHHHHHhC---------CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC--C
Confidence 467789999999999999999998863 3568999999 99999999999888875 788888876531 0
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
...||.|++.-. + ..|.. ....++|+++.++|||||+|+
T Consensus 247 ---------------------~~~~D~v~~~~v------l-------~~~~~-------~~~~~~l~~~~~~L~pgG~l~ 285 (360)
T 1tw3_A 247 ---------------------PRKADAIILSFV------L-------LNWPD-------HDAVRILTRCAEALEPGGRIL 285 (360)
T ss_dssp ---------------------SSCEEEEEEESC------G-------GGSCH-------HHHHHHHHHHHHTEEEEEEEE
T ss_pred ---------------------CCCccEEEEccc------c-------cCCCH-------HHHHHHHHHHHHhcCCCcEEE
Confidence 024999997321 1 11211 123578999999999999999
Q ss_pred EEcCC
Q 004759 233 YSTCS 237 (732)
Q Consensus 233 YSTCS 237 (732)
.+...
T Consensus 286 i~e~~ 290 (360)
T 1tw3_A 286 IHERD 290 (360)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 87655
No 232
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.29 E-value=7.1e-06 Score=87.86 Aligned_cols=112 Identities=14% Similarity=0.110 Sum_probs=85.6
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n-i~Vt~~Da~~fp~~ 152 (732)
++..++.+|||+|||+|..+..+++.. |...++++|+ +..+..+++++++.+..+ +.+..+|+...+.
T Consensus 186 ~~~~~~~~vLDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 254 (359)
T 1x19_A 186 AKLDGVKKMIDVGGGIGDISAAMLKHF---------PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY- 254 (359)
T ss_dssp CCCTTCCEEEEESCTTCHHHHHHHHHC---------TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC-
T ss_pred cCCCCCCEEEEECCcccHHHHHHHHHC---------CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC-
Confidence 467788999999999999999998873 3578999999 999999999999888764 8888888765321
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
..+|.|++.- +...|.. ....++|+++.+.|||||+|+
T Consensus 255 ----------------------~~~D~v~~~~-------------vlh~~~d-------~~~~~~l~~~~~~L~pgG~l~ 292 (359)
T 1x19_A 255 ----------------------PEADAVLFCR-------------ILYSANE-------QLSTIMCKKAFDAMRSGGRLL 292 (359)
T ss_dssp ----------------------CCCSEEEEES-------------CGGGSCH-------HHHHHHHHHHHTTCCTTCEEE
T ss_pred ----------------------CCCCEEEEec-------------hhccCCH-------HHHHHHHHHHHHhcCCCCEEE
Confidence 2249998721 1122211 234678999999999999998
Q ss_pred EEcCCC
Q 004759 233 YSTCSM 238 (732)
Q Consensus 233 YSTCSl 238 (732)
......
T Consensus 293 i~e~~~ 298 (359)
T 1x19_A 293 ILDMVI 298 (359)
T ss_dssp EEEECC
T ss_pred EEeccc
Confidence 776554
No 233
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.27 E-value=1.5e-05 Score=85.86 Aligned_cols=114 Identities=13% Similarity=0.074 Sum_probs=83.7
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCCccC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~~~~ 155 (732)
....+|||++||+|..+..+++.. |...++++|+ +..+..++.++...+. .++.+..+|..... .
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~--- 243 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN---------KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRD-V--- 243 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS---------TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSS-C---
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC---------CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccC-C---
Confidence 456899999999999999998873 4578999999 9999999888877775 47888888876521 0
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
.. ...||.|++-- +...|.. ....++|+++.+.|||||+|+...
T Consensus 244 ---------------~~-p~~~D~v~~~~-------------vlh~~~~-------~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 244 ---------------PF-PTGFDAVWMSQ-------------FLDCFSE-------EEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp ---------------CC-CCCCSEEEEES-------------CSTTSCH-------HHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ---------------CC-CCCcCEEEEec-------------hhhhCCH-------HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 00 15699999721 1112221 223578999999999999999876
Q ss_pred CCCCC
Q 004759 236 CSMNP 240 (732)
Q Consensus 236 CSlnp 240 (732)
..+..
T Consensus 288 ~~~~~ 292 (363)
T 3dp7_A 288 TLWDR 292 (363)
T ss_dssp CCTTS
T ss_pred eccCC
Confidence 65544
No 234
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.27 E-value=1.3e-06 Score=89.06 Aligned_cols=102 Identities=17% Similarity=0.086 Sum_probs=73.7
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
++.+|||+|||+|..+..+++. ...|+++|+++..+..++.+.. .+ +...|+..++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~~------ 110 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER-----------GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLPF------ 110 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT-----------TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCCS------
T ss_pred CCCeEEEeCCCcCHHHHHHHHc-----------CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCCC------
Confidence 7889999999999999888764 3589999999999988876543 22 55666655431
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 237 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS 237 (732)
....||.|++... + ..|.. ...++|.++.++|||||+|+.++.+
T Consensus 111 ---------------~~~~fD~v~~~~~------~-------~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 111 ---------------PSGAFEAVLALGD------V-------LSYVE--------NKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp ---------------CTTCEEEEEECSS------H-------HHHCS--------CHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ---------------CCCCEEEEEEcch------h-------hhccc--------cHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 1267999997321 1 01111 1457899999999999999998765
Q ss_pred C
Q 004759 238 M 238 (732)
Q Consensus 238 l 238 (732)
.
T Consensus 155 ~ 155 (260)
T 2avn_A 155 F 155 (260)
T ss_dssp H
T ss_pred h
Confidence 3
No 235
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.26 E-value=7e-06 Score=89.95 Aligned_cols=92 Identities=13% Similarity=0.147 Sum_probs=71.9
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCC------------------------------CCCCeEEEEEeCCHH
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPG------------------------------ALPNGMVIANDLDVQ 122 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~------------------------------~~p~G~VvAnDid~~ 122 (732)
+.+.+++..|||.|||+|...+.+|.+..+.. ++ ......|+++|+|+.
T Consensus 189 l~~~~~~~~llDp~CGSGt~lIEAa~~a~~ia-pg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~ 267 (384)
T 3ldg_A 189 LSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIA-PGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGR 267 (384)
T ss_dssp HTTCCTTSCEEETTCTTSHHHHHHHHHHTTCC-TTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH
T ss_pred HhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcC-CCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHH
Confidence 44678899999999999999998887654310 00 011356999999999
Q ss_pred HHHHHHHHHHHcCCCc-eEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCC
Q 004759 123 RCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCS 187 (732)
Q Consensus 123 Rl~~L~~n~kRlg~~n-i~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCS 187 (732)
.+..+++|+++.|..+ +.+.+.|+..++. ...||.|++|||..
T Consensus 268 al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~----------------------~~~fD~Iv~NPPYG 311 (384)
T 3ldg_A 268 MVEIARKNAREVGLEDVVKLKQMRLQDFKT----------------------NKINGVLISNPPYG 311 (384)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEECCGGGCCC----------------------CCCSCEEEECCCCT
T ss_pred HHHHHHHHHHHcCCCCceEEEECChHHCCc----------------------cCCcCEEEECCchh
Confidence 9999999999999864 8899999877542 14799999999953
No 236
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.25 E-value=1.3e-06 Score=89.15 Aligned_cols=98 Identities=15% Similarity=0.170 Sum_probs=73.9
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||++||+|..+..++..+ +.+.|+++|+++.++..+.++. +++.+...|+..+|.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~----- 144 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL---------PEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPF----- 144 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC---------TTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSB-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC---------CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCC-----
Confidence 678999999999999999998864 2468999999999998876642 456677777765431
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
....||.|++... + ..+..+.++|||||+|+.++.
T Consensus 145 ----------------~~~~fD~v~~~~~----------~-------------------~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 145 ----------------SDTSMDAIIRIYA----------P-------------------CKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp ----------------CTTCEEEEEEESC----------C-------------------CCHHHHHHHEEEEEEEEEEEE
T ss_pred ----------------CCCceeEEEEeCC----------h-------------------hhHHHHHHhcCCCcEEEEEEc
Confidence 1257999996211 0 126778889999999999875
Q ss_pred CC
Q 004759 237 SM 238 (732)
Q Consensus 237 Sl 238 (732)
..
T Consensus 180 ~~ 181 (269)
T 1p91_A 180 GP 181 (269)
T ss_dssp CT
T ss_pred CH
Confidence 54
No 237
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.25 E-value=7.1e-06 Score=89.78 Aligned_cols=91 Identities=12% Similarity=0.163 Sum_probs=71.6
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCC------------------------------CCCCeEEEEEeCCHH
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPG------------------------------ALPNGMVIANDLDVQ 122 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~------------------------------~~p~G~VvAnDid~~ 122 (732)
+++..++..|||.|||+|..++.+|.+..+.. ++ ..+...|+++|+|+.
T Consensus 190 ~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~a-pg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ 268 (385)
T 3ldu_A 190 LTPWKAGRVLVDPMCGSGTILIEAAMIGINMA-PGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEE 268 (385)
T ss_dssp TSCCCTTSCEEETTCTTCHHHHHHHHHHTTCC-TTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHH
T ss_pred hhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhC-CCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHH
Confidence 34678899999999999999999887753210 00 012357999999999
Q ss_pred HHHHHHHHHHHcCCC-ceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCC
Q 004759 123 RCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPC 186 (732)
Q Consensus 123 Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPC 186 (732)
.+..++.|+.+.|.. ++.+.+.|+..++. ...||.|++|||.
T Consensus 269 ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~----------------------~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 269 SIDIARENAEIAGVDEYIEFNVGDATQFKS----------------------EDEFGFIITNPPY 311 (385)
T ss_dssp HHHHHHHHHHHHTCGGGEEEEECCGGGCCC----------------------SCBSCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCceEEEECChhhcCc----------------------CCCCcEEEECCCC
Confidence 999999999999986 68899998877542 1479999999994
No 238
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.24 E-value=2.9e-06 Score=87.87 Aligned_cols=141 Identities=14% Similarity=0.027 Sum_probs=83.8
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc-----------------CC---
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-----------------CT--- 136 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl-----------------g~--- 136 (732)
.++.+|||+|||+|. +..++.... ...|+|+|+++..+..++++++.. +.
T Consensus 70 ~~~~~vLDiGcG~G~-~~~l~~~~~---------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 139 (289)
T 2g72_A 70 VSGRTLIDIGSGPTV-YQLLSACSH---------FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGEC 139 (289)
T ss_dssp SCCSEEEEETCTTCC-GGGTTGGGG---------CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCC
T ss_pred CCCCeEEEECCCcCh-HHHHhhccC---------CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccc
Confidence 378899999999999 433332211 358999999999999887754321 10
Q ss_pred ----------CceEEEeccccc-CCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccc
Q 004759 137 ----------ANLIVTNHEAQH-FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVG 205 (732)
Q Consensus 137 ----------~ni~Vt~~Da~~-fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~ 205 (732)
..+.+...|+.. .|. . +.......||.|++-. ++. |-..
T Consensus 140 ~~~~~~~~~~~~~~~~~~D~~~~~~~-~---------------~~~~~~~~fD~V~~~~------~l~--------~~~~ 189 (289)
T 2g72_A 140 WQDKERQLRARVKRVLPIDVHQPQPL-G---------------AGSPAPLPADALVSAF------CLE--------AVSP 189 (289)
T ss_dssp HHHHHHHHHHHEEEEECCCTTSSSTT-C---------------SSCSSCSSEEEEEEES------CHH--------HHCS
T ss_pred hhhhHHHHHhhhceEEecccCCCCCc-c---------------ccccCCCCCCEEEehh------hhh--------hhcC
Confidence 013455556655 221 0 0011235699999721 110 0000
Q ss_pred cccchHHHHHHHHHHHHhhccCCCEEEEEcCCC------------CCcCcHHHHHHHHHHCCCcEEEEec
Q 004759 206 LGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM------------NPVENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 206 ~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSl------------np~ENEaVV~~~L~~~~~~velvd~ 263 (732)
. .....++|.++.++|||||+|+.+...- ...-+++-+..+|++.| ++++.+
T Consensus 190 ~----~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG--f~~~~~ 253 (289)
T 2g72_A 190 D----LASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSG--YKVRDL 253 (289)
T ss_dssp S----HHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTT--EEEEEE
T ss_pred C----HHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcC--CeEEEe
Confidence 0 1234678999999999999999864210 01124566778888776 555544
No 239
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.23 E-value=6.5e-06 Score=90.41 Aligned_cols=91 Identities=14% Similarity=0.186 Sum_probs=71.5
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCC------------------------------CCCCeEEEEEeCCHH
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPG------------------------------ALPNGMVIANDLDVQ 122 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~------------------------------~~p~G~VvAnDid~~ 122 (732)
+++..++..|||.|||+|..++.+|.+..+.. ++ ..+...|+++|+|+.
T Consensus 196 l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~a-pg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ 274 (393)
T 3k0b_A 196 LTSWHPDRPFYDPVCGSGTIPIEAALIGQNIA-PGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDAR 274 (393)
T ss_dssp HSCCCTTSCEEETTCTTSHHHHHHHHHHTTCC-TTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH
T ss_pred HhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcC-CCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHH
Confidence 45678899999999999999998887654310 00 012356999999999
Q ss_pred HHHHHHHHHHHcCCC-ceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCC
Q 004759 123 RCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPC 186 (732)
Q Consensus 123 Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPC 186 (732)
.+..++.|+++.|.. ++.+...|+..++. ...||.|++|||.
T Consensus 275 al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~----------------------~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 275 LIEIAKQNAVEAGLGDLITFRQLQVADFQT----------------------EDEYGVVVANPPY 317 (393)
T ss_dssp HHHHHHHHHHHTTCTTCSEEEECCGGGCCC----------------------CCCSCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCceEEEECChHhCCC----------------------CCCCCEEEECCCC
Confidence 999999999999986 48889998877542 1479999999995
No 240
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.21 E-value=4.3e-06 Score=98.90 Aligned_cols=114 Identities=12% Similarity=0.082 Sum_probs=84.7
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc------CCCceEEEeccccc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM------CTANLIVTNHEAQH 148 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl------g~~ni~Vt~~Da~~ 148 (732)
...++.+|||+|||+|..+..|+.... +.+.|+|+|+++..+..++++++.. +..++.+..+|+..
T Consensus 718 ~~~~g~rVLDVGCGTG~lai~LAr~g~--------p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d 789 (950)
T 3htx_A 718 RESSASTLVDFGCGSGSLLDSLLDYPT--------SLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE 789 (950)
T ss_dssp HHSCCSEEEEETCSSSHHHHHHTSSCC--------CCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS
T ss_pred cccCCCEEEEECCCCCHHHHHHHHhCC--------CCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh
Confidence 446899999999999999988876421 2369999999999999998877643 56789999999887
Q ss_pred CCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCC
Q 004759 149 FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVG 228 (732)
Q Consensus 149 fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpG 228 (732)
++. ....||.|++. +++.+-++ .....++..+.++||||
T Consensus 790 Lp~---------------------~d~sFDlVV~~------eVLeHL~d--------------p~l~~~L~eI~RvLKPG 828 (950)
T 3htx_A 790 FDS---------------------RLHDVDIGTCL------EVIEHMEE--------------DQACEFGEKVLSLFHPK 828 (950)
T ss_dssp CCT---------------------TSCSCCEEEEE------SCGGGSCH--------------HHHHHHHHHHHHTTCCS
T ss_pred CCc---------------------ccCCeeEEEEe------CchhhCCh--------------HHHHHHHHHHHHHcCCC
Confidence 542 12679999982 33322221 12346789999999998
Q ss_pred CEEEEEcCCC
Q 004759 229 GRIVYSTCSM 238 (732)
Q Consensus 229 GrLVYSTCSl 238 (732)
.++.+|...
T Consensus 829 -~LIISTPN~ 837 (950)
T 3htx_A 829 -LLIVSTPNY 837 (950)
T ss_dssp -EEEEEECBG
T ss_pred -EEEEEecCc
Confidence 888887653
No 241
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.21 E-value=9.5e-08 Score=97.43 Aligned_cols=94 Identities=17% Similarity=0.202 Sum_probs=70.3
Q ss_pred ccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEE
Q 004759 63 QEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVT 142 (732)
Q Consensus 63 Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt 142 (732)
+..........+++.++++|||+|||+|..|..+++. .+.|+|+|+|+..+..++++++ +..++.+.
T Consensus 14 ~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~-----------~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~ 80 (245)
T 1yub_A 14 SEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI-----------SKQVTSIELDSHLFNLSSEKLK--LNTRVTLI 80 (245)
T ss_dssp CTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH-----------SSEEEESSSSCSSSSSSSCTTT--TCSEEEEC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh-----------CCeEEEEECCHHHHHHHHHHhc--cCCceEEE
Confidence 3333333445567889999999999999999999876 2689999999999888777654 34678888
Q ss_pred ecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCC
Q 004759 143 NHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG 190 (732)
Q Consensus 143 ~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdG 190 (732)
++|+..++.- ....| .|++++|.....
T Consensus 81 ~~D~~~~~~~--------------------~~~~f-~vv~n~Py~~~~ 107 (245)
T 1yub_A 81 HQDILQFQFP--------------------NKQRY-KIVGNIPYHLST 107 (245)
T ss_dssp CSCCTTTTCC--------------------CSSEE-EEEEECCSSSCH
T ss_pred ECChhhcCcc--------------------cCCCc-EEEEeCCccccH
Confidence 8888775410 01468 899999977643
No 242
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.19 E-value=2.6e-06 Score=93.16 Aligned_cols=118 Identities=15% Similarity=0.138 Sum_probs=84.1
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCCCccC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~~~~ 155 (732)
-+|.+|||++||+|-.+..+|++ +...|+|+|.++ .+..++++++.+|.. .|.++..+...+..
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a----------GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l---- 146 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA----------GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL---- 146 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT----------TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC----
T ss_pred cCCCEEEEeCCCccHHHHHHHHh----------CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC----
Confidence 36889999999999887766653 245899999986 788888889998875 58888888766321
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
..+||+|+++.- |.+.+.- .....++...-++|||||+++-+.
T Consensus 147 ------------------pe~~DvivsE~~--~~~l~~e-----------------~~l~~~l~a~~r~Lkp~G~~iP~~ 189 (376)
T 4hc4_A 147 ------------------PEQVDAIVSEWM--GYGLLHE-----------------SMLSSVLHARTKWLKEGGLLLPAS 189 (376)
T ss_dssp ------------------SSCEEEEECCCC--BTTBTTT-----------------CSHHHHHHHHHHHEEEEEEEESCE
T ss_pred ------------------CccccEEEeecc--ccccccc-----------------chhhhHHHHHHhhCCCCceECCcc
Confidence 267999998532 2222110 011245555668999999999887
Q ss_pred CCC--CCcCcHHH
Q 004759 236 CSM--NPVENEAV 246 (732)
Q Consensus 236 CSl--np~ENEaV 246 (732)
|++ .|+|.+..
T Consensus 190 atly~apie~~~l 202 (376)
T 4hc4_A 190 AELFIVPISDQML 202 (376)
T ss_dssp EEEEEEEECCHHH
T ss_pred ceEEEEEeccchh
Confidence 774 47787654
No 243
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.18 E-value=8.6e-06 Score=84.53 Aligned_cols=134 Identities=15% Similarity=0.119 Sum_probs=86.3
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHH------hcCCCCCCCCCeEEEEEeCCH---HHHH-----------HHHHHHHH--
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEII------HQSTNPGALPNGMVIANDLDV---QRCN-----------LLIHQTKR-- 133 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l------~~~~~~~~~p~G~VvAnDid~---~Rl~-----------~L~~n~kR-- 133 (732)
.+++.+||++|.|.|.-++.+++.. ... .......++++|.++ +.+. .+..+++.
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~---~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~ 134 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQ---AQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWP 134 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTT---SSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCC---CCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcc
Confidence 3567899999999999998887765 210 000136899999987 3333 33333333
Q ss_pred ----------c--CCCceEEEeccccc-CCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhh
Q 004759 134 ----------M--CTANLIVTNHEAQH-FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWR 200 (732)
Q Consensus 134 ----------l--g~~ni~Vt~~Da~~-fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~ 200 (732)
+ +..++.+..+|+.. ++.+. ......||+|++|+- .-.++|++|.
T Consensus 135 ~~~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~-----------------~~~~~~~D~iflD~f-----sp~~~p~lw~ 192 (257)
T 2qy6_A 135 MPLPGCHRLLLDEGRVTLDLWFGDINELISQLD-----------------DSLNQKVDAWFLDGF-----APAKNPDMWT 192 (257)
T ss_dssp CSCSEEEEEEEC--CEEEEEEESCHHHHGGGSC-----------------GGGTTCEEEEEECSS-----CTTTCGGGCC
T ss_pred ccccchhheeccCCceEEEEEECcHHHHHhhcc-----------------cccCCeEEEEEECCC-----CcccChhhcC
Confidence 1 12356677888876 23210 000137999999971 1245788766
Q ss_pred hcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCC
Q 004759 201 KWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 255 (732)
Q Consensus 201 ~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~ 255 (732)
. .++....++|+|||+|+.-|++ .+|...|...|
T Consensus 193 ~--------------~~l~~l~~~L~pGG~l~tysaa-------~~vrr~L~~aG 226 (257)
T 2qy6_A 193 Q--------------NLFNAMARLARPGGTLATFTSA-------GFVRRGLQEAG 226 (257)
T ss_dssp H--------------HHHHHHHHHEEEEEEEEESCCB-------HHHHHHHHHHT
T ss_pred H--------------HHHHHHHHHcCCCcEEEEEeCC-------HHHHHHHHHCC
Confidence 3 6788899999999999833332 47788888866
No 244
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.17 E-value=5.2e-05 Score=81.78 Aligned_cols=114 Identities=12% Similarity=0.043 Sum_probs=86.1
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~ 152 (732)
++..++.+|||++||+|..+..+++.. |...++++|+ +..+..++.++...+. .++.+..+|... +
T Consensus 198 ~~~~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~-- 264 (369)
T 3gwz_A 198 YDFSGAATAVDIGGGRGSLMAAVLDAF---------PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-T-- 264 (369)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-C--
T ss_pred CCCccCcEEEEeCCCccHHHHHHHHHC---------CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-C--
Confidence 456788999999999999999998873 4568999999 9999999999888875 578888887652 1
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
. ...||.|++-- ++..|.. ....++|+++.+.|||||+|+
T Consensus 265 -------------------~-p~~~D~v~~~~-------------vlh~~~d-------~~~~~~L~~~~~~L~pgG~l~ 304 (369)
T 3gwz_A 265 -------------------I-PDGADVYLIKH-------------VLHDWDD-------DDVVRILRRIATAMKPDSRLL 304 (369)
T ss_dssp -------------------C-CSSCSEEEEES-------------CGGGSCH-------HHHHHHHHHHHTTCCTTCEEE
T ss_pred -------------------C-CCCceEEEhhh-------------hhccCCH-------HHHHHHHHHHHHHcCCCCEEE
Confidence 0 12699999721 1122211 233579999999999999999
Q ss_pred EEcCCCCC
Q 004759 233 YSTCSMNP 240 (732)
Q Consensus 233 YSTCSlnp 240 (732)
.....+..
T Consensus 305 i~e~~~~~ 312 (369)
T 3gwz_A 305 VIDNLIDE 312 (369)
T ss_dssp EEEEBCCS
T ss_pred EEEeccCC
Confidence 87665544
No 245
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.17 E-value=2.9e-06 Score=88.07 Aligned_cols=98 Identities=12% Similarity=-0.041 Sum_probs=74.6
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHH----cCCCceEEEecccccCCCCc
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR----MCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kR----lg~~ni~Vt~~Da~~fp~~~ 153 (732)
.+.+|||+|||.|+.+..++.. + +.|+++|+|+..+..+++++.. +..+++.+...|+..+.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~----------~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--- 137 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY----------D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--- 137 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS----------S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---
T ss_pred CCCEEEEEeCCcCHHHHHHHhC----------C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---
Confidence 4579999999999988776543 3 6899999999999988776532 23457888888876632
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
..||.|++|.+ +|. ..+..+.++|+|||++|.
T Consensus 138 ---------------------~~fD~Ii~d~~---------dp~------------------~~~~~~~~~L~pgG~lv~ 169 (262)
T 2cmg_A 138 ---------------------KKYDLIFCLQE---------PDI------------------HRIDGLKRMLKEDGVFIS 169 (262)
T ss_dssp ---------------------CCEEEEEESSC---------CCH------------------HHHHHHHTTEEEEEEEEE
T ss_pred ---------------------hhCCEEEECCC---------ChH------------------HHHHHHHHhcCCCcEEEE
Confidence 46999999853 111 167788999999999998
Q ss_pred EcCC
Q 004759 234 STCS 237 (732)
Q Consensus 234 STCS 237 (732)
.+++
T Consensus 170 ~~~~ 173 (262)
T 2cmg_A 170 VAKH 173 (262)
T ss_dssp EEEC
T ss_pred EcCC
Confidence 7655
No 246
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.17 E-value=1.5e-05 Score=84.25 Aligned_cols=111 Identities=12% Similarity=0.088 Sum_probs=82.8
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCCc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~~ 153 (732)
+..+ .+|||+|||+|..+..+++.. |...++++|+ +..+..+++++.+.+. .++.+..+|... + +
T Consensus 165 ~~~~-~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~- 230 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGSGELTKAILQAE---------PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-E-V- 230 (334)
T ss_dssp CCTT-CEEEEETCTTCHHHHHHHHHC---------TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-C-C-
T ss_pred CCCC-CEEEEeCCCchHHHHHHHHHC---------CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-C-C-
Confidence 5566 899999999999999998873 3568999999 9999999988877664 468888887654 1 0
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
...||.|++-- ++..|.. ....++|+++.+.|||||+|+.
T Consensus 231 --------------------~~~~D~v~~~~-------------vl~~~~~-------~~~~~~l~~~~~~L~pgG~l~i 270 (334)
T 2ip2_A 231 --------------------PSNGDIYLLSR-------------IIGDLDE-------AASLRLLGNCREAMAGDGRVVV 270 (334)
T ss_dssp --------------------CSSCSEEEEES-------------CGGGCCH-------HHHHHHHHHHHHHSCTTCEEEE
T ss_pred --------------------CCCCCEEEEch-------------hccCCCH-------HHHHHHHHHHHHhcCCCCEEEE
Confidence 14699999721 1222321 2236899999999999999998
Q ss_pred EcCCCC
Q 004759 234 STCSMN 239 (732)
Q Consensus 234 STCSln 239 (732)
....+.
T Consensus 271 ~e~~~~ 276 (334)
T 2ip2_A 271 IERTIS 276 (334)
T ss_dssp EECCBC
T ss_pred EEeccC
Confidence 865543
No 247
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.16 E-value=3e-06 Score=88.10 Aligned_cols=126 Identities=13% Similarity=0.039 Sum_probs=86.4
Q ss_pred hhhcCCCCC--CEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC--------C-Cce
Q 004759 71 PLFLDVQPD--HFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC--------T-ANL 139 (732)
Q Consensus 71 ~llLd~~pg--~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg--------~-~ni 139 (732)
..++.+++| .+|||++||.|.-++.+|.. .+.|+++|+++..+.++++++++.. . .++
T Consensus 79 ~~al~l~~g~~~~VLDl~~G~G~dal~lA~~-----------g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i 147 (258)
T 2oyr_A 79 AKAVGIKGDYLPDVVDATAGLGRDAFVLASV-----------GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERL 147 (258)
T ss_dssp HHHTTCBTTBCCCEEETTCTTCHHHHHHHHH-----------TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHE
T ss_pred HHHhcccCCCCCEEEEcCCcCCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCE
Confidence 345667778 99999999999999999886 3579999999999999999887642 2 468
Q ss_pred EEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHH
Q 004759 140 IVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAM 219 (732)
Q Consensus 140 ~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~ 219 (732)
.+.+.|+..+... . ...||.|++|||..... + ...++
T Consensus 148 ~~~~~D~~~~L~~-------------------~-~~~fDvV~lDP~y~~~~---~--------------------saavk 184 (258)
T 2oyr_A 148 QLIHASSLTALTD-------------------I-TPRPQVVYLDPMFPHKQ---K--------------------SALVK 184 (258)
T ss_dssp EEEESCHHHHSTT-------------------C-SSCCSEEEECCCCCCCC---C-------------------------
T ss_pred EEEECCHHHHHHh-------------------C-cccCCEEEEcCCCCCcc---c--------------------chHHH
Confidence 8899988764220 0 13599999999853311 0 02234
Q ss_pred HHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCCCcE
Q 004759 220 RGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSV 258 (732)
Q Consensus 220 rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~~~v 258 (732)
..++.|++.+ .| ..+.++++..+++.....|
T Consensus 185 k~~~~lr~l~-----~~---~~~~~~ll~~a~~~a~~rv 215 (258)
T 2oyr_A 185 KEMRVFQSLV-----GP---DLDADGLLEPARLLATKRV 215 (258)
T ss_dssp HHHHHHHHHS-----CC---CTTGGGGHHHHHHHCSSEE
T ss_pred HHHHHHHHhh-----cC---CccHHHHHHHHHHhcCCeE
Confidence 4445555444 24 3467788888888764443
No 248
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.15 E-value=4.8e-06 Score=88.18 Aligned_cols=82 Identities=17% Similarity=0.156 Sum_probs=68.4
Q ss_pred hhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccC
Q 004759 70 PPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHF 149 (732)
Q Consensus 70 p~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~f 149 (732)
.+..+++.++++|||++||+|..|..|++. .+.|+|+|+|+..+..+++++. +.+++.+.++|+..+
T Consensus 42 Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-----------~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~ 108 (295)
T 3gru_A 42 AVESANLTKDDVVLEIGLGKGILTEELAKN-----------AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKV 108 (295)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHH-----------SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTS
T ss_pred HHHhcCCCCcCEEEEECCCchHHHHHHHhc-----------CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhC
Confidence 344568899999999999999999999886 3689999999999999999887 456899999998775
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVP 185 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvP 185 (732)
+. ....||+|+++.|
T Consensus 109 ~~---------------------~~~~fD~Iv~NlP 123 (295)
T 3gru_A 109 DL---------------------NKLDFNKVVANLP 123 (295)
T ss_dssp CG---------------------GGSCCSEEEEECC
T ss_pred Cc---------------------ccCCccEEEEeCc
Confidence 31 1146999999988
No 249
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.13 E-value=3.4e-06 Score=82.75 Aligned_cols=102 Identities=16% Similarity=0.058 Sum_probs=71.9
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.++.+|||+|||+|..+..++.. ...|+++|+++..+..+.++. ..+...|+..+..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-----------~~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~----- 87 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-----------GTRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDM----- 87 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-----------TCEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCC-----
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-----------CCeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCC-----
Confidence 67899999999999999888764 268999999999888766532 1455566554211
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
......||.|++. +++.+.++ ...+|..+.++|+|||+++.++-
T Consensus 88 --------------~~~~~~fD~v~~~------~~l~~~~~----------------~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 88 --------------PYEEEQFDCVIFG------DVLEHLFD----------------PWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp --------------CSCTTCEEEEEEE------SCGGGSSC----------------HHHHHHHTGGGEEEEEEEEEEEE
T ss_pred --------------CCCCCccCEEEEC------ChhhhcCC----------------HHHHHHHHHHHcCCCCEEEEEeC
Confidence 1122679999973 22211111 13688999999999999999864
Q ss_pred C
Q 004759 237 S 237 (732)
Q Consensus 237 S 237 (732)
.
T Consensus 132 ~ 132 (230)
T 3cc8_A 132 N 132 (230)
T ss_dssp C
T ss_pred C
Confidence 4
No 250
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.09 E-value=1.4e-05 Score=85.01 Aligned_cols=116 Identities=16% Similarity=0.123 Sum_probs=86.2
Q ss_pred cCCCC-CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCC
Q 004759 74 LDVQP-DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPG 151 (732)
Q Consensus 74 Ld~~p-g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~ 151 (732)
++..+ +.+|||++||+|..+..+++.. |...++++|+ +..+..+++++.+.+.. ++.+..+|....+.
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 243 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRH---------PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARN 243 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHC---------TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGG
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhC---------CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcc
Confidence 35566 8899999999999999998763 4578999999 88999999988888864 58888888765321
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
.....||.|++- . ++..|.. ....++|+++.+.|||||+|
T Consensus 244 --------------------~~~~~~D~v~~~------~-------vlh~~~~-------~~~~~~l~~~~~~L~pgG~l 283 (352)
T 3mcz_A 244 --------------------FEGGAADVVMLN------D-------CLHYFDA-------REAREVIGHAAGLVKPGGAL 283 (352)
T ss_dssp --------------------GTTCCEEEEEEE------S-------CGGGSCH-------HHHHHHHHHHHHTEEEEEEE
T ss_pred --------------------cCCCCccEEEEe------c-------ccccCCH-------HHHHHHHHHHHHHcCCCCEE
Confidence 012459999971 1 1122221 12467999999999999999
Q ss_pred EEEcCCCC
Q 004759 232 VYSTCSMN 239 (732)
Q Consensus 232 VYSTCSln 239 (732)
+.....+.
T Consensus 284 ~i~e~~~~ 291 (352)
T 3mcz_A 284 LILTMTMN 291 (352)
T ss_dssp EEEEECCC
T ss_pred EEEEeccC
Confidence 98765553
No 251
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.09 E-value=6.1e-06 Score=87.31 Aligned_cols=99 Identities=18% Similarity=0.100 Sum_probs=65.9
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEE-ecccccCCCCccCC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVT-NHEAQHFPGCRANK 156 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt-~~Da~~fp~~~~~~ 156 (732)
+|.+|||++||+|+.|..|++. +.+.|+|+|+++.++....+ .. +.+... ..++..++.
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~----------ga~~V~aVDvs~~mL~~a~r----~~-~rv~~~~~~ni~~l~~----- 144 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN----------GAKLVYAVDVGTNQLVWKLR----QD-DRVRSMEQYNFRYAEP----- 144 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT----------TCSEEEEECSSSSCSCHHHH----TC-TTEEEECSCCGGGCCG-----
T ss_pred cccEEEecCCCccHHHHHHHhC----------CCCEEEEEECCHHHHHHHHH----hC-cccceecccCceecch-----
Confidence 5789999999999999988775 24799999999998875322 11 222222 122222211
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
.......||.|++|+.... + ..+|....++|||||++|..
T Consensus 145 -------------~~l~~~~fD~v~~d~sf~s---------------------l----~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 145 -------------VDFTEGLPSFASIDVSFIS---------------------L----NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp -------------GGCTTCCCSEEEECCSSSC---------------------G----GGTHHHHHHHSCTTCEEEEE
T ss_pred -------------hhCCCCCCCEEEEEeeHhh---------------------H----HHHHHHHHHHcCcCCEEEEE
Confidence 0111235999999875221 1 34788899999999999986
No 252
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.09 E-value=9.6e-06 Score=80.34 Aligned_cols=96 Identities=16% Similarity=0.171 Sum_probs=69.3
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
|+.+|||++||+|..+..++. . +++|+++..+..++.+ ++.+...|+..++.
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~------------~---~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~------ 98 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKI------------K---IGVEPSERMAEIARKR-------GVFVLKGTAENLPL------ 98 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTC------------C---EEEESCHHHHHHHHHT-------TCEEEECBTTBCCS------
T ss_pred CCCcEEEeCCCCCHHHHHHHH------------H---hccCCCHHHHHHHHhc-------CCEEEEcccccCCC------
Confidence 488999999999998876521 2 8999999999887765 46677777665431
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 237 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS 237 (732)
....||.|++.. ++...+ ....+|..+.++|+|||+++.++..
T Consensus 99 ---------------~~~~fD~v~~~~------~l~~~~----------------~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 99 ---------------KDESFDFALMVT------TICFVD----------------DPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp ---------------CTTCEEEEEEES------CGGGSS----------------CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---------------CCCCeeEEEEcc------hHhhcc----------------CHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 125799999742 221111 1246889999999999999998754
Q ss_pred C
Q 004759 238 M 238 (732)
Q Consensus 238 l 238 (732)
.
T Consensus 142 ~ 142 (219)
T 1vlm_A 142 R 142 (219)
T ss_dssp S
T ss_pred C
Confidence 3
No 253
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.07 E-value=8.7e-06 Score=83.24 Aligned_cols=66 Identities=17% Similarity=0.283 Sum_probs=55.9
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCC
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 150 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp 150 (732)
..+++.++++|||+|||+|..|..+++. .+.|+|+|+|+..+..+++++.. ..++.+.++|+..++
T Consensus 24 ~~~~~~~~~~VLDiG~G~G~lt~~l~~~-----------~~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~ 89 (244)
T 1qam_A 24 TNIRLNEHDNIFEIGSGKGHFTLELVQR-----------CNFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQFK 89 (244)
T ss_dssp TTCCCCTTCEEEEECCTTSHHHHHHHHH-----------SSEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGCC
T ss_pred HhCCCCCCCEEEEEeCCchHHHHHHHHc-----------CCeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhCC
Confidence 4457788999999999999999999886 36899999999999999887653 357899999987754
No 254
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.06 E-value=5.3e-06 Score=91.44 Aligned_cols=104 Identities=13% Similarity=0.070 Sum_probs=74.0
Q ss_pred CCCEEEeecCC------CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCC
Q 004759 78 PDHFVLDMCAA------PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPG 151 (732)
Q Consensus 78 pg~~VLDmCAA------PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~ 151 (732)
++.+|||++|| +|+.++.++.... |.+.|+++|+++.+. ...+++.+..+|+..+|.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~f--------P~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf 278 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFF--------PRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEF 278 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHC--------TTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhC--------CCCEEEEEECCHHHh---------hcCCCcEEEEecccccch
Confidence 56899999999 7888888877642 468999999999862 234688999999876432
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
.. ........||.|++|.. - . ...+.+.|..+.++|||||++
T Consensus 279 ~~---------------~l~~~d~sFDlVisdgs----H----~---------------~~d~~~aL~el~rvLKPGGvl 320 (419)
T 3sso_A 279 LD---------------RIARRYGPFDIVIDDGS----H----I---------------NAHVRTSFAALFPHVRPGGLY 320 (419)
T ss_dssp HH---------------HHHHHHCCEEEEEECSC----C----C---------------HHHHHHHHHHHGGGEEEEEEE
T ss_pred hh---------------hhhcccCCccEEEECCc----c----c---------------chhHHHHHHHHHHhcCCCeEE
Confidence 10 00001267999998631 0 0 123467899999999999999
Q ss_pred EEEcC
Q 004759 232 VYSTC 236 (732)
Q Consensus 232 VYSTC 236 (732)
+.+..
T Consensus 321 Vi~Dl 325 (419)
T 3sso_A 321 VIEDM 325 (419)
T ss_dssp EEECG
T ss_pred EEEec
Confidence 98743
No 255
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.06 E-value=5.2e-06 Score=81.65 Aligned_cols=115 Identities=16% Similarity=0.083 Sum_probs=79.3
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCC
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPG 151 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~ 151 (732)
.+....++.+|||+|||+|..+..+ ...|+++|+++. ++.+...|+..+|.
T Consensus 61 ~l~~~~~~~~vLDiG~G~G~~~~~l--------------~~~v~~~D~s~~---------------~~~~~~~d~~~~~~ 111 (215)
T 2zfu_A 61 DLRQRPASLVVADFGCGDCRLASSI--------------RNPVHCFDLASL---------------DPRVTVCDMAQVPL 111 (215)
T ss_dssp HHHTSCTTSCEEEETCTTCHHHHHC--------------CSCEEEEESSCS---------------STTEEESCTTSCSC
T ss_pred HHhccCCCCeEEEECCcCCHHHHHh--------------hccEEEEeCCCC---------------CceEEEeccccCCC
Confidence 3334578899999999999987665 147999999987 33455666655331
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
....||.|++... +. .+ ....+|..+.++|+|||++
T Consensus 112 ---------------------~~~~fD~v~~~~~------l~-~~----------------~~~~~l~~~~~~L~~gG~l 147 (215)
T 2zfu_A 112 ---------------------EDESVDVAVFCLS------LM-GT----------------NIRDFLEEANRVLKPGGLL 147 (215)
T ss_dssp ---------------------CTTCEEEEEEESC------CC-SS----------------CHHHHHHHHHHHEEEEEEE
T ss_pred ---------------------CCCCEeEEEEehh------cc-cc----------------CHHHHHHHHHHhCCCCeEE
Confidence 1257999997321 10 01 1246788999999999999
Q ss_pred EEEcCCCCCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 232 VYSTCSMNPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 232 VYSTCSlnp~ENEaVV~~~L~~~~~~velvd 262 (732)
+.+++.. ...+..-+..+|++.| ++++.
T Consensus 148 ~i~~~~~-~~~~~~~~~~~l~~~G--f~~~~ 175 (215)
T 2zfu_A 148 KVAEVSS-RFEDVRTFLRAVTKLG--FKIVS 175 (215)
T ss_dssp EEEECGG-GCSCHHHHHHHHHHTT--EEEEE
T ss_pred EEEEcCC-CCCCHHHHHHHHHHCC--CEEEE
Confidence 9987653 2236777788888876 55554
No 256
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.06 E-value=2.6e-06 Score=89.21 Aligned_cols=136 Identities=14% Similarity=0.136 Sum_probs=74.3
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
++++.+|||+|||||++|..+++..+ .+.|+|+|+........+. ....+. +++....++..+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~---------~~~v~g~dVGvDl~~~pi~-~~~~g~-~ii~~~~~~dv~------ 134 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKE---------VSGVKGFTLGRDGHEKPMN-VQSLGW-NIITFKDKTDIH------ 134 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTT---------EEEEEEECCCCTTCCCCCC-CCBTTG-GGEEEECSCCTT------
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC---------CCcceeEEEeccCcccccc-cCcCCC-CeEEEeccceeh------
Confidence 57899999999999999988876532 3567777765321000000 000011 333333332111
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCC-CEEEEE
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVG-GRIVYS 234 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpG-GrLVYS 234 (732)
......||.||+|..-+ +|. .|.. +..+..+|.-|.++|+|| |.+|..
T Consensus 135 ---------------~l~~~~~DlVlsD~apn-sG~------~~~D---------~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 135 ---------------RLEPVKCDTLLCDIGES-SSS------SVTE---------GERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp ---------------TSCCCCCSEEEECCCCC-CSC------HHHH---------HHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred ---------------hcCCCCccEEEecCccC-cCc------hHHH---------HHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 11236799999997444 553 1111 223345589999999999 999985
Q ss_pred cCCCCCcCcHHHHHHHHHHCCCcEEE
Q 004759 235 TCSMNPVENEAVVAEILRKCEGSVEL 260 (732)
Q Consensus 235 TCSlnp~ENEaVV~~~L~~~~~~vel 260 (732)
.-.-. -++..-..+.|++.-..+..
T Consensus 184 Vf~py-g~~~~~l~~~lk~~F~~V~~ 208 (277)
T 3evf_A 184 VLAPY-MPDVLEKLELLQRRFGGTVI 208 (277)
T ss_dssp ESCTT-SHHHHHHHHHHHHHHCCEEE
T ss_pred ecCCC-CccHHHHHHHHHHhcCCEEE
Confidence 43311 23333333444443234444
No 257
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.06 E-value=1.3e-06 Score=90.60 Aligned_cols=84 Identities=17% Similarity=0.035 Sum_probs=66.1
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCH-------HHHHHHHHHHHHcCCCc-eEEEec
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDV-------QRCNLLIHQTKRMCTAN-LIVTNH 144 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~-------~Rl~~L~~n~kRlg~~n-i~Vt~~ 144 (732)
++.+.++.+|||+|||+|..|..++.. .+.|+|+|+++ ..+..+++|++..+..+ +.+.+.
T Consensus 78 a~~~~~~~~VLDlgcG~G~~a~~lA~~-----------g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~ 146 (258)
T 2r6z_A 78 AVNHTAHPTVWDATAGLGRDSFVLASL-----------GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFG 146 (258)
T ss_dssp HTTGGGCCCEEETTCTTCHHHHHHHHT-----------TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEES
T ss_pred HhCcCCcCeEEEeeCccCHHHHHHHHh-----------CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEEC
Confidence 346677899999999999999999874 36899999999 88888888887777655 889999
Q ss_pred ccccCCCCccCCCCCCCCcccccccccccc--ccccEEEecCCC
Q 004759 145 EAQHFPGCRANKNFSSASDKGIESESNMGQ--LLFDRVLCDVPC 186 (732)
Q Consensus 145 Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~--~~FDrVL~DvPC 186 (732)
|+..+.. .... ..||.|++|||.
T Consensus 147 d~~~~l~-------------------~~~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 147 NAAEQMP-------------------ALVKTQGKPDIVYLDPMY 171 (258)
T ss_dssp CHHHHHH-------------------HHHHHHCCCSEEEECCCC
T ss_pred CHHHHHH-------------------hhhccCCCccEEEECCCC
Confidence 8876321 0111 469999999974
No 258
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.06 E-value=9.6e-07 Score=91.46 Aligned_cols=38 Identities=18% Similarity=0.198 Sum_probs=29.3
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEe
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIAND 118 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnD 118 (732)
++||++|||++|||||+|..+++..+-. ...|.|+|.|
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg-----~V~G~vig~D 108 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQ-----EVRGYTKGGP 108 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEE-----EEEEECCCST
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCC-----CceeEEEccc
Confidence 5899999999999999999988862210 0147888888
No 259
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.05 E-value=2.7e-05 Score=91.53 Aligned_cols=128 Identities=13% Similarity=0.117 Sum_probs=88.4
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCC----------------------------------CCCeEEEEEe
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGA----------------------------------LPNGMVIAND 118 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~----------------------------------~p~G~VvAnD 118 (732)
+.+..++..|||.|||+|...+.+|.+..+.. ++. .+...|+|+|
T Consensus 185 ~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~a-pG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~D 263 (703)
T 3v97_A 185 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRA-PGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSD 263 (703)
T ss_dssp HTTCCTTSCEEETTCTTSHHHHHHHHHHTTCC-TTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred hhCCCCCCeEEecCCCCcHHHHHHHHHHhhcC-CCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEE
Confidence 34668899999999999999998887653210 000 0235899999
Q ss_pred CCHHHHHHHHHHHHHcCCCc-eEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChh
Q 004759 119 LDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPD 197 (732)
Q Consensus 119 id~~Rl~~L~~n~kRlg~~n-i~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd 197 (732)
+|+..+..++.|+++.|+.+ +.+...|+..+..- .....||.|++|||.. .. +
T Consensus 264 id~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~-------------------~~~~~~d~Iv~NPPYG-~R-l----- 317 (703)
T 3v97_A 264 SDARVIQRARTNARLAGIGELITFEVKDVAQLTNP-------------------LPKGPYGTVLSNPPYG-ER-L----- 317 (703)
T ss_dssp SCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCS-------------------CTTCCCCEEEECCCCC-C--------
T ss_pred CCHHHHHHHHHHHHHcCCCCceEEEECChhhCccc-------------------cccCCCCEEEeCCCcc-cc-c-----
Confidence 99999999999999999876 88889988764210 0113799999999972 11 0
Q ss_pred hhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 198 IWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 198 ~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
+....+..+.. .+.+.++.+.+||+++.-|
T Consensus 318 -------g~~~~l~~ly~-~l~~~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 318 -------DSEPALIALHS-LLGRIMKNQFGGWNLSLFS 347 (703)
T ss_dssp --------CCHHHHHHHH-HHHHHHHHHCTTCEEEEEE
T ss_pred -------cchhHHHHHHH-HHHHHHHhhCCCCeEEEEe
Confidence 11112333333 3566677778999987654
No 260
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.04 E-value=5.3e-05 Score=78.80 Aligned_cols=121 Identities=11% Similarity=0.004 Sum_probs=77.2
Q ss_pred CCCCEEEeecCCC---ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 77 QPDHFVLDMCAAP---GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 77 ~pg~~VLDmCAAP---GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
.+..+|||++||+ |..+..++.. . |.+.|+++|+|+..+..+++++.. ..++.+...|....+.+.
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~-~--------p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~~ 144 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSV-N--------PDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYIL 144 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHH-C--------TTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHHH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHh-C--------CCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhhh
Confidence 3457999999999 9765444333 2 468999999999999988887632 357888888876521100
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
... ..........||.|++- +++..-++ . ...++|++..+.|||||+|+.
T Consensus 145 -~~~---------~~~~~~d~~~~d~v~~~------~vlh~~~d-------~-------~~~~~l~~~~~~L~pGG~l~i 194 (274)
T 2qe6_A 145 -NHP---------DVRRMIDFSRPAAIMLV------GMLHYLSP-------D-------VVDRVVGAYRDALAPGSYLFM 194 (274)
T ss_dssp -HSH---------HHHHHCCTTSCCEEEET------TTGGGSCT-------T-------THHHHHHHHHHHSCTTCEEEE
T ss_pred -ccc---------hhhccCCCCCCEEEEEe------chhhhCCc-------H-------HHHHHHHHHHHhCCCCcEEEE
Confidence 000 00000112478999872 22211111 0 135789999999999999999
Q ss_pred EcCCC
Q 004759 234 STCSM 238 (732)
Q Consensus 234 STCSl 238 (732)
++...
T Consensus 195 ~~~~~ 199 (274)
T 2qe6_A 195 TSLVD 199 (274)
T ss_dssp EEEBC
T ss_pred EEecC
Confidence 87654
No 261
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.03 E-value=1.7e-05 Score=83.72 Aligned_cols=136 Identities=14% Similarity=0.059 Sum_probs=75.4
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
+++|.+|||+||||||+|..+++.++ ...|+++|+........+. .+.++ .++..... ...+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~g---------v~sV~Gvdlg~~~~~~P~~-~~~~~-~~iv~~~~-~~di------ 140 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKE---------VMSVKGYTLGIEGHEKPIH-MQTLG-WNIVKFKD-KSNV------ 140 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTT---------EEEEEEECCCCTTSCCCCC-CCBTT-GGGEEEEC-SCCT------
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcC---------CceeeeEEecccccccccc-ccccC-CceEEeec-Ccee------
Confidence 36899999999999999999887532 3578899985421000000 00000 11211111 1110
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCC-CEEEEE
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVG-GRIVYS 234 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpG-GrLVYS 234 (732)
.......||.|++|.-.+ +|.- ++ =+..|..||.-|.++|+|| |.+|.-
T Consensus 141 --------------~~l~~~~~DlVlsD~APn-sG~~----~~-----------D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 141 --------------FTMPTEPSDTLLCDIGES-SSNP----LV-----------ERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp --------------TTSCCCCCSEEEECCCCC-CSSH----HH-----------HHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred --------------eecCCCCcCEEeecCcCC-CCCH----HH-----------HHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 011236799999998777 7741 10 1234455699999999999 999865
Q ss_pred cCCCCCcCcHHHHHHHHHHCCCcEEE
Q 004759 235 TCSMNPVENEAVVAEILRKCEGSVEL 260 (732)
Q Consensus 235 TCSlnp~ENEaVV~~~L~~~~~~vel 260 (732)
.-...-.+..+. .+.|++.-..+..
T Consensus 191 vF~~yG~~~~~l-l~~lk~~F~~V~~ 215 (300)
T 3eld_A 191 VLAPYHPDVIEK-LERLQLRFGGGIV 215 (300)
T ss_dssp ESSTTSHHHHHH-HHHHHHHHCCEEE
T ss_pred eccccCccHHHH-HHHHHHhCCcEEE
Confidence 332112333333 3444443334444
No 262
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.94 E-value=3.3e-06 Score=86.05 Aligned_cols=101 Identities=17% Similarity=0.108 Sum_probs=64.5
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
++.+|||+|||+|..|..+++. + .+.|+|+|+++..+....++. +.+.+.. ..++..+..
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g---------~~~V~gvDis~~ml~~a~~~~-----~~~~~~~--~~~~~~~~~--- 96 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-G---------AKLVYALDVGTNQLAWKIRSD-----ERVVVME--QFNFRNAVL--- 96 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T---------CSEEEEECSSCCCCCHHHHTC-----TTEEEEC--SCCGGGCCG---
T ss_pred CCCEEEEEccCCCHHHHHHHhc-C---------CCEEEEEcCCHHHHHHHHHhC-----ccccccc--cceEEEeCH---
Confidence 4679999999999999998775 1 358999999999888644432 2222211 111110000
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
.......||.+.+|+..+.. ..+|..+.++|||||+++..+
T Consensus 97 ------------~~~~~~~~d~~~~D~v~~~l-------------------------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 97 ------------ADFEQGRPSFTSIDVSFISL-------------------------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp ------------GGCCSCCCSEEEECCSSSCG-------------------------GGTHHHHHHHSCTTCEEEEEE
T ss_pred ------------hHcCcCCCCEEEEEEEhhhH-------------------------HHHHHHHHHhccCCCEEEEEE
Confidence 00111236777777764431 347888999999999999853
No 263
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.93 E-value=1.4e-05 Score=86.95 Aligned_cols=76 Identities=20% Similarity=0.246 Sum_probs=55.8
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
+++|++|||+||||||+|.++++. .|.|+|+|..+= ...+ ...+++.+...|+..+..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r-----------g~~V~aVD~~~l-----~~~l--~~~~~V~~~~~d~~~~~~---- 266 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR-----------NMWVYSVDNGPM-----AQSL--MDTGQVTWLREDGFKFRP---- 266 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT-----------TCEEEEECSSCC-----CHHH--HTTTCEEEECSCTTTCCC----
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC-----------CCEEEEEEhhhc-----Chhh--ccCCCeEEEeCccccccC----
Confidence 678999999999999999998775 589999997531 1111 234678888888766431
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCC
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG 190 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdG 190 (732)
....||.|+||+-|.-.|
T Consensus 267 -----------------~~~~~D~vvsDm~~~p~~ 284 (375)
T 4auk_A 267 -----------------TRSNISWMVCDMVEKPAK 284 (375)
T ss_dssp -----------------CSSCEEEEEECCSSCHHH
T ss_pred -----------------CCCCcCEEEEcCCCChHH
Confidence 125799999998755433
No 264
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.92 E-value=3.2e-06 Score=88.60 Aligned_cols=111 Identities=21% Similarity=0.213 Sum_probs=65.2
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
++|+.+|||+|||||+++..+++.. +...|+++|+........+. .+.++ .+++....+...
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~---------gv~sV~GvdvG~d~~~~pi~-~~~~g-~~ii~~~~~~dv------- 149 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLK---------NVKKVMAFTLGVQGHEKPIM-RTTLG-WNLIRFKDKTDV------- 149 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST---------TEEEEEEECCCCTTSCCCCC-CCBTT-GGGEEEECSCCG-------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc---------CCCeeeeEEeccCccccccc-cccCC-CceEEeeCCcch-------
Confidence 5789999999999999998877643 24678899986531000000 00011 122221111110
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCC--CEEEE
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVG--GRIVY 233 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpG--GrLVY 233 (732)
.......||.||||.--+ +|.- +. =+..+..+|.-|.++|+|| |.+|.
T Consensus 150 --------------~~l~~~~~DvVLSDmApn-sG~~------~~---------D~~rs~~LL~~A~~~Lk~g~~G~Fv~ 199 (282)
T 3gcz_A 150 --------------FNMEVIPGDTLLCDIGES-SPSI------AV---------EEQRTLRVLNCAKQWLQEGNYTEFCI 199 (282)
T ss_dssp --------------GGSCCCCCSEEEECCCCC-CSCH------HH---------HHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred --------------hhcCCCCcCEEEecCccC-CCCh------HH---------HHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 012236799999996544 5531 00 1223445589999999999 99986
Q ss_pred E
Q 004759 234 S 234 (732)
Q Consensus 234 S 234 (732)
-
T Consensus 200 K 200 (282)
T 3gcz_A 200 K 200 (282)
T ss_dssp E
T ss_pred E
Confidence 4
No 265
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.92 E-value=1.5e-05 Score=82.65 Aligned_cols=67 Identities=15% Similarity=0.181 Sum_probs=57.4
Q ss_pred hhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCC
Q 004759 71 PLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 150 (732)
Q Consensus 71 ~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp 150 (732)
+..+++.++++|||+|||+|..|..|++. .+.|+|+|+|+..+..+++++.. ..++.+.++|+..++
T Consensus 22 v~~~~~~~~~~VLEIG~G~G~lt~~La~~-----------~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~ 88 (255)
T 3tqs_A 22 VSAIHPQKTDTLVEIGPGRGALTDYLLTE-----------CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFD 88 (255)
T ss_dssp HHHHCCCTTCEEEEECCTTTTTHHHHTTT-----------SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCC
T ss_pred HHhcCCCCcCEEEEEcccccHHHHHHHHh-----------CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCC
Confidence 34568899999999999999999998764 36899999999999999988764 468999999998764
No 266
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.90 E-value=3.8e-05 Score=80.37 Aligned_cols=112 Identities=17% Similarity=0.126 Sum_probs=72.6
Q ss_pred CCCEEEeecCCCCh----HHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHH--------------Hc-----
Q 004759 78 PDHFVLDMCAAPGS----KTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTK--------------RM----- 134 (732)
Q Consensus 78 pg~~VLDmCAAPGs----KT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~k--------------Rl----- 134 (732)
++.+|||+|||+|- .+..|++.++.. .....|+|.|+|+..+..+++++- +.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~-----~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~ 179 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMA-----PGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGT 179 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSC-----TTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECC
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccC-----CCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccc
Confidence 45799999999998 455555654321 003589999999999999887641 10
Q ss_pred ----C---C-----CceEEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhc
Q 004759 135 ----C---T-----ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKW 202 (732)
Q Consensus 135 ----g---~-----~ni~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~w 202 (732)
| + .++.+..+|....|. .....||.|+|- .++ ..+
T Consensus 180 ~~~~~~~~v~~~lr~~V~F~~~dl~~~~~--------------------~~~~~fDlI~cr------nvl-------iyf 226 (274)
T 1af7_A 180 GPHEGLVRVRQELANYVEFSSVNLLEKQY--------------------NVPGPFDAIFCR------NVM-------IYF 226 (274)
T ss_dssp TTSCSEEEECHHHHTTEEEEECCTTCSSC--------------------CCCCCEEEEEEC------SSG-------GGS
T ss_pred cCCCCceeechhhcccCeEEecccCCCCC--------------------CcCCCeeEEEEC------Cch-------HhC
Confidence 0 0 145666666544110 002579999981 111 000
Q ss_pred ccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 203 NVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 203 s~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
-...|.+++.+..+.|+|||.|+..
T Consensus 227 -------~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 227 -------DKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp -------CHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred -------CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 1245789999999999999999863
No 267
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.86 E-value=8.6e-05 Score=74.55 Aligned_cols=131 Identities=15% Similarity=0.087 Sum_probs=82.4
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEecccccC----
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT---ANLIVTNHEAQHF---- 149 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~---~ni~Vt~~Da~~f---- 149 (732)
++..+||++++ |.-|+.+|++ +.|.|+++|.|++++..++.++++.|. .++.+..+|+...
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~----------~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg 96 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAEL----------PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWG 96 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTS----------TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGG
T ss_pred hCCCEEEEECc--hHHHHHHHHc----------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhccc
Confidence 34679999997 6666666653 148999999999999999999999984 5788888886542
Q ss_pred -CCCccCCCCCCCCcccccccc--ccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhcc
Q 004759 150 -PGCRANKNFSSASDKGIESES--NMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK 226 (732)
Q Consensus 150 -p~~~~~~~~~~~~~~~~~~~~--~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLK 226 (732)
|.-.... .. -..+.... ......||.|++|+. |. ...+..++.+|+
T Consensus 97 ~p~~~~~~---~~-l~~~~~~i~~~~~~~~fDlIfIDg~--------k~-------------------~~~~~~~l~~l~ 145 (202)
T 3cvo_A 97 HPVSDAKW---RS-YPDYPLAVWRTEGFRHPDVVLVDGR--------FR-------------------VGCALATAFSIT 145 (202)
T ss_dssp CBSSSTTG---GG-TTHHHHGGGGCTTCCCCSEEEECSS--------SH-------------------HHHHHHHHHHCS
T ss_pred ccccchhh---hh-HHHHhhhhhccccCCCCCEEEEeCC--------Cc-------------------hhHHHHHHHhcC
Confidence 1100000 00 00000000 001267999999874 10 123455789999
Q ss_pred CCCEEEEEcCCCCCcCcHHHHHHHHH
Q 004759 227 VGGRIVYSTCSMNPVENEAVVAEILR 252 (732)
Q Consensus 227 pGGrLVYSTCSlnp~ENEaVV~~~L~ 252 (732)
+||+||.=-.+.. .....|..+++
T Consensus 146 ~GG~Iv~DNv~~r--~~y~~v~~~~~ 169 (202)
T 3cvo_A 146 RPVTLLFDDYSQR--RWQHQVEEFLG 169 (202)
T ss_dssp SCEEEEETTGGGC--SSGGGGHHHHC
T ss_pred CCeEEEEeCCcCC--cchHHHHHHHh
Confidence 9999976433332 34456667765
No 268
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.83 E-value=1.1e-05 Score=87.88 Aligned_cols=106 Identities=12% Similarity=0.035 Sum_probs=71.5
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceE--EEecccccCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLI--VTNHEAQHFPG 151 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~--Vt~~Da~~fp~ 151 (732)
+.+.++.+|||++||+|..+..+++. ...|+++|+++..+..++.+ +..... +...++..
T Consensus 103 ~~~~~~~~VLDiGcG~G~~~~~l~~~-----------g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~--- 164 (416)
T 4e2x_A 103 ELTGPDPFIVEIGCNDGIMLRTIQEA-----------GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADD--- 164 (416)
T ss_dssp TTCSSSCEEEEETCTTTTTHHHHHHT-----------TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHH---
T ss_pred hCCCCCCEEEEecCCCCHHHHHHHHc-----------CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhh---
Confidence 45678999999999999998888764 35899999999988766543 433211 00011111
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
.......||.|++. +++.+-++ ...+|+.+.++|||||++
T Consensus 165 ------------------l~~~~~~fD~I~~~------~vl~h~~d----------------~~~~l~~~~r~LkpgG~l 204 (416)
T 4e2x_A 165 ------------------VRRTEGPANVIYAA------NTLCHIPY----------------VQSVLEGVDALLAPDGVF 204 (416)
T ss_dssp ------------------HHHHHCCEEEEEEE------SCGGGCTT----------------HHHHHHHHHHHEEEEEEE
T ss_pred ------------------cccCCCCEEEEEEC------ChHHhcCC----------------HHHHHHHHHHHcCCCeEE
Confidence 11223689999973 23322222 356889999999999999
Q ss_pred EEEcCC
Q 004759 232 VYSTCS 237 (732)
Q Consensus 232 VYSTCS 237 (732)
+.++-.
T Consensus 205 ~i~~~~ 210 (416)
T 4e2x_A 205 VFEDPY 210 (416)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 987544
No 269
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.82 E-value=9.1e-05 Score=79.06 Aligned_cols=109 Identities=15% Similarity=0.113 Sum_probs=73.1
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~fp~~ 152 (732)
++..++.+|||++||+|..+..+++.. |...++++|++ ..+. ..++++.+. .++.+..+|+.. +
T Consensus 180 ~~~~~~~~vLDvG~G~G~~~~~l~~~~---------p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~-~-- 244 (348)
T 3lst_A 180 GDFPATGTVADVGGGRGGFLLTVLREH---------PGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLR-E-- 244 (348)
T ss_dssp SCCCSSEEEEEETCTTSHHHHHHHHHC---------TTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTT-C--
T ss_pred CCccCCceEEEECCccCHHHHHHHHHC---------CCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCC-C--
Confidence 467789999999999999999998874 45789999993 3222 222222232 357788777641 0
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
. . .||.|++-- ++..|.. ....++|+++.+.|||||+|+
T Consensus 245 -------------------~-p-~~D~v~~~~-------------vlh~~~d-------~~~~~~L~~~~~~LkpgG~l~ 283 (348)
T 3lst_A 245 -------------------V-P-HADVHVLKR-------------ILHNWGD-------EDSVRILTNCRRVMPAHGRVL 283 (348)
T ss_dssp -------------------C-C-CCSEEEEES-------------CGGGSCH-------HHHHHHHHHHHHTCCTTCEEE
T ss_pred -------------------C-C-CCcEEEEeh-------------hccCCCH-------HHHHHHHHHHHHhcCCCCEEE
Confidence 1 1 699998711 1122221 122679999999999999999
Q ss_pred EEcCCC
Q 004759 233 YSTCSM 238 (732)
Q Consensus 233 YSTCSl 238 (732)
.....+
T Consensus 284 i~e~~~ 289 (348)
T 3lst_A 284 VIDAVV 289 (348)
T ss_dssp EEECCB
T ss_pred EEEecc
Confidence 876544
No 270
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.75 E-value=3.6e-05 Score=80.52 Aligned_cols=83 Identities=16% Similarity=0.062 Sum_probs=66.2
Q ss_pred hhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccC
Q 004759 70 PPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHF 149 (732)
Q Consensus 70 p~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~f 149 (732)
.+..+++.++ +|||+|||+|..|..|++. .+.|+|+|+|+..+..+++++. ..++.+.++|+..+
T Consensus 39 Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~-----------~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l~~ 103 (271)
T 3fut_A 39 IVEAARPFTG-PVFEVGPGLGALTRALLEA-----------GAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDALLY 103 (271)
T ss_dssp HHHHHCCCCS-CEEEECCTTSHHHHHHHHT-----------TCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGGGS
T ss_pred HHHhcCCCCC-eEEEEeCchHHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChhhC
Confidence 3455688899 9999999999999999875 3689999999999999988764 35899999998775
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCS 187 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCS 187 (732)
+.- ....||+|+.+.|..
T Consensus 104 ~~~--------------------~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 104 PWE--------------------EVPQGSLLVANLPYH 121 (271)
T ss_dssp CGG--------------------GSCTTEEEEEEECSS
T ss_pred Chh--------------------hccCccEEEecCccc
Confidence 420 012589999999844
No 271
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.71 E-value=2.7e-05 Score=81.85 Aligned_cols=85 Identities=22% Similarity=0.254 Sum_probs=66.6
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
+|+++||..+||+++|.|+.|..|++. .|.|+|+|.|+..+..+.+ ++. .++.+++.+..+++..
T Consensus 17 ~L~~~~gg~~VD~T~G~GGHS~~il~~-----------~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~ 81 (285)
T 1wg8_A 17 LLAVRPGGVYVDATLGGAGHARGILER-----------GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRH 81 (285)
T ss_dssp HHTCCTTCEEEETTCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHH
T ss_pred hhCCCCCCEEEEeCCCCcHHHHHHHHC-----------CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHH
Confidence 467899999999999999999999885 3899999999999998776 533 5788888887765431
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCC
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 188 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSG 188 (732)
- .......||.||+|...|.
T Consensus 82 L----------------~~~g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 82 L----------------AALGVERVDGILADLGVSS 101 (285)
T ss_dssp H----------------HHTTCSCEEEEEEECSCCH
T ss_pred H----------------HHcCCCCcCEEEeCCcccc
Confidence 0 0011146999999998776
No 272
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.67 E-value=0.00019 Score=77.13 Aligned_cols=114 Identities=12% Similarity=0.114 Sum_probs=80.2
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
++..+..+|||+++|+|..+..|++.. |...++..|. +.-+..++.++...+..++.+..+|...-|
T Consensus 175 ~~~~~~~~v~DvGgG~G~~~~~l~~~~---------p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~--- 241 (353)
T 4a6d_A 175 FDLSVFPLMCDLGGGAGALAKECMSLY---------PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP--- 241 (353)
T ss_dssp SCGGGCSEEEEETCTTSHHHHHHHHHC---------SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC---
T ss_pred cCcccCCeEEeeCCCCCHHHHHHHHhC---------CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC---
Confidence 456778899999999999999998873 5567888887 666666666554445678999988864311
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
...+|.|++= .+...|... .-.+||+++.+.|+|||+|+.
T Consensus 242 --------------------~~~~D~~~~~-------------~vlh~~~d~-------~~~~iL~~~~~al~pgg~lli 281 (353)
T 4a6d_A 242 --------------------LPEADLYILA-------------RVLHDWADG-------KCSHLLERIYHTCKPGGGILV 281 (353)
T ss_dssp --------------------CCCCSEEEEE-------------SSGGGSCHH-------HHHHHHHHHHHHCCTTCEEEE
T ss_pred --------------------CCCceEEEee-------------eecccCCHH-------HHHHHHHHHHhhCCCCCEEEE
Confidence 1347888861 123334322 225789999999999999998
Q ss_pred EcCCCCC
Q 004759 234 STCSMNP 240 (732)
Q Consensus 234 STCSlnp 240 (732)
.-.-+.+
T Consensus 282 ~e~~~~~ 288 (353)
T 4a6d_A 282 IESLLDE 288 (353)
T ss_dssp EECCCCT
T ss_pred EEeeeCC
Confidence 7665543
No 273
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.56 E-value=5.9e-05 Score=81.16 Aligned_cols=89 Identities=18% Similarity=0.163 Sum_probs=67.0
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
+|+++||..++|+|+|-|+.|..|++.++ +.|.|+|+|.|+..+..+. ++...++.+++.+..++...
T Consensus 52 ~L~i~pggiyVD~TlG~GGHS~~iL~~lg--------~~GrVig~D~Dp~Al~~A~----rL~~~Rv~lv~~nF~~l~~~ 119 (347)
T 3tka_A 52 GLNIRPDGIYIDGTFGRGGHSRLILSQLG--------EEGRLLAIDRDPQAIAVAK----TIDDPRFSIIHGPFSALGEY 119 (347)
T ss_dssp HTCCCTTCEEEESCCTTSHHHHHHHTTCC--------TTCEEEEEESCHHHHHHHT----TCCCTTEEEEESCGGGHHHH
T ss_pred hhCCCCCCEEEEeCcCCCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHH----hhcCCcEEEEeCCHHHHHHH
Confidence 46789999999999999999999998764 4799999999999998762 44446788887776664321
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCC
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 188 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSG 188 (732)
- . .. .-...+|.||.|-.||.
T Consensus 120 L-~-------------~~-g~~~~vDgILfDLGVSS 140 (347)
T 3tka_A 120 V-A-------------ER-DLIGKIDGILLDLGVSS 140 (347)
T ss_dssp H-H-------------HT-TCTTCEEEEEEECSCCH
T ss_pred H-H-------------hc-CCCCcccEEEECCccCH
Confidence 0 0 00 00125999999999986
No 274
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.55 E-value=0.00038 Score=71.92 Aligned_cols=106 Identities=16% Similarity=0.034 Sum_probs=73.9
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.+..+|||++||.|-.+..++ . ...++|.|+|...+..+.+++.++| .+..+...|...-+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~---------~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~~~~~------ 164 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---G---------IASVWGCDIHQGLGDVITPFAREKD-WDFTFALQDVLCAP------ 164 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---T---------CSEEEEEESBHHHHHHHHHHHHHTT-CEEEEEECCTTTSC------
T ss_pred CCCCeEEEecCCccHHHHHhc---c---------CCeEEEEeCCHHHHHHHHHHHHhcC-CCceEEEeecccCC------
Confidence 567899999999999877664 2 5799999999999999999999988 45566666654311
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE-EEc
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV-YST 235 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV-YST 235 (732)
....||.||+- ....-|...|...+.+.++.|+++|.+| +=|
T Consensus 165 ----------------~~~~~DvvLll---------------------k~lh~LE~q~~~~~~~ll~aL~~~~vvVsfPt 207 (253)
T 3frh_A 165 ----------------PAEAGDLALIF---------------------KLLPLLEREQAGSAMALLQSLNTPRMAVSFPT 207 (253)
T ss_dssp ----------------CCCBCSEEEEE---------------------SCHHHHHHHSTTHHHHHHHHCBCSEEEEEEEC
T ss_pred ----------------CCCCcchHHHH---------------------HHHHHhhhhchhhHHHHHHHhcCCCEEEEcCh
Confidence 12579999861 0112233445555668888999977665 224
Q ss_pred CCC
Q 004759 236 CSM 238 (732)
Q Consensus 236 CSl 238 (732)
-|+
T Consensus 208 ksl 210 (253)
T 3frh_A 208 RSL 210 (253)
T ss_dssp C--
T ss_pred HHh
Confidence 455
No 275
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.54 E-value=0.00022 Score=74.51 Aligned_cols=109 Identities=13% Similarity=0.071 Sum_probs=75.5
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
.+..+|||++||.|-.+..++.. .|...++|+|+|...+..+.+++.++|+. ..+...|...
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~---------~p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~-------- 192 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGL---------PAETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLE-------- 192 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTC---------CTTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTT--------
T ss_pred CCCceeeeeccCccHHHHHHHhh---------CCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecc--------
Confidence 44679999999999988776442 25789999999999999999999999976 4555554332
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE-EEc
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV-YST 235 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV-YST 235 (732)
......||.||+- .....|-..|+..+-+.++.|++||.+| |=|
T Consensus 193 --------------~~p~~~~DvaL~l---------------------kti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 193 --------------DRLDEPADVTLLL---------------------KTLPCLETQQRGSGWEVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp --------------SCCCSCCSEEEET---------------------TCHHHHHHHSTTHHHHHHHHSSCSEEEEEEEC
T ss_pred --------------cCCCCCcchHHHH---------------------HHHHHhhhhhhHHHHHHHHHhCCCCEEEeccc
Confidence 1123779999861 0111222333435558999999988877 445
Q ss_pred CCC
Q 004759 236 CSM 238 (732)
Q Consensus 236 CSl 238 (732)
-|+
T Consensus 238 ksl 240 (281)
T 3lcv_B 238 KSL 240 (281)
T ss_dssp C--
T ss_pred hhh
Confidence 455
No 276
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.52 E-value=0.00015 Score=76.21 Aligned_cols=118 Identities=13% Similarity=0.021 Sum_probs=76.7
Q ss_pred CCEEEeecCCC--ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 79 DHFVLDMCAAP--GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 79 g~~VLDmCAAP--GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
-..|||++||. |+.+.++++.+. |...|+++|.|+..+...+.++...+..++.++..|....+.+. .
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~--------P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l-~- 148 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVA--------PESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASIL-D- 148 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHC--------TTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHH-T-
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHC--------CCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhh-c-
Confidence 36899999997 566788877653 46899999999999998877664333346888888887642110 0
Q ss_pred CCCCCCcccccccccccccccc-----EEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 157 NFSSASDKGIESESNMGQLLFD-----RVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FD-----rVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
.......|| .|++ .+++..-++. ..+..+|.+..+.|+|||+|
T Consensus 149 -------------~~~~~~~~D~~~p~av~~------~avLH~l~d~-------------~~p~~~l~~l~~~L~PGG~L 196 (277)
T 3giw_A 149 -------------APELRDTLDLTRPVALTV------IAIVHFVLDE-------------DDAVGIVRRLLEPLPSGSYL 196 (277)
T ss_dssp -------------CHHHHTTCCTTSCCEEEE------ESCGGGSCGG-------------GCHHHHHHHHHTTSCTTCEE
T ss_pred -------------ccccccccCcCCcchHHh------hhhHhcCCch-------------hhHHHHHHHHHHhCCCCcEE
Confidence 000012233 3554 2333222221 11357899999999999999
Q ss_pred EEEcCCC
Q 004759 232 VYSTCSM 238 (732)
Q Consensus 232 VYSTCSl 238 (732)
+.|+-+-
T Consensus 197 vls~~~~ 203 (277)
T 3giw_A 197 AMSIGTA 203 (277)
T ss_dssp EEEEECC
T ss_pred EEEeccC
Confidence 9997654
No 277
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.48 E-value=0.0002 Score=75.00 Aligned_cols=69 Identities=14% Similarity=0.122 Sum_probs=57.0
Q ss_pred hhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCC
Q 004759 71 PLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 150 (732)
Q Consensus 71 ~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp 150 (732)
+..+++.++++|||+|||+|..|..|++.... ..+.|+|+|+|+..+..++++. ..++.+.++|+..++
T Consensus 35 v~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~-------~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~ 103 (279)
T 3uzu_A 35 VAAIRPERGERMVEIGPGLGALTGPVIARLAT-------PGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFD 103 (279)
T ss_dssp HHHHCCCTTCEEEEECCTTSTTHHHHHHHHCB-------TTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCC
T ss_pred HHhcCCCCcCEEEEEccccHHHHHHHHHhCCC-------cCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCC
Confidence 34567889999999999999999999987421 0256999999999999998873 467999999998765
No 278
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.44 E-value=0.00024 Score=76.49 Aligned_cols=103 Identities=11% Similarity=0.067 Sum_probs=71.6
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
+.++.+|||++||+|..+..+++.. |...++++|+ +..+..++. .+++.+..+|... + +
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~---------~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~-~--- 265 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY---------PLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-S-V--- 265 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-C-C---
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC---------CCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-C-C---
Confidence 5678999999999999999998873 3568999999 766543322 2567787777644 1 0
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
..||.|++- .++ ..|.. ....++|+++.+.|||||+|+.+.
T Consensus 266 -------------------~~~D~v~~~------~~l-------h~~~d-------~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 266 -------------------PQGDAMILK------AVC-------HNWSD-------EKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp -------------------CCEEEEEEE------SSG-------GGSCH-------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -------------------CCCCEEEEe------ccc-------ccCCH-------HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 128999972 111 12211 122478999999999999999875
Q ss_pred CCC
Q 004759 236 CSM 238 (732)
Q Consensus 236 CSl 238 (732)
..+
T Consensus 307 ~~~ 309 (372)
T 1fp1_D 307 FIL 309 (372)
T ss_dssp EEE
T ss_pred ecc
Confidence 443
No 279
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.44 E-value=0.00033 Score=75.62 Aligned_cols=104 Identities=11% Similarity=0.074 Sum_probs=72.4
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
..++.+|||++||+|..+..+++.. |...++++|+ +..+..++. .+++.+..+|... |.
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~---- 259 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY---------PSINAINFDL-PHVIQDAPA------FSGVEHLGGDMFD-GV---- 259 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CC----
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC---------CCCEEEEEeh-HHHHHhhhh------cCCCEEEecCCCC-CC----
Confidence 5678999999999999999998874 4578999999 655443221 2578888887654 10
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
. .. |.|++-- +...|.. ....++|+++.+.|||||+|+...
T Consensus 260 -----------------p-~~-D~v~~~~-------------vlh~~~~-------~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 260 -----------------P-KG-DAIFIKW-------------ICHDWSD-------EHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp -----------------C-CC-SEEEEES-------------CGGGBCH-------HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred -----------------C-CC-CEEEEec-------------hhhcCCH-------HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 0 12 8888621 2223322 123578999999999999999887
Q ss_pred CCCC
Q 004759 236 CSMN 239 (732)
Q Consensus 236 CSln 239 (732)
..+.
T Consensus 301 ~~~~ 304 (368)
T 3reo_A 301 YILP 304 (368)
T ss_dssp CCCC
T ss_pred eccC
Confidence 6654
No 280
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.44 E-value=0.00017 Score=76.10 Aligned_cols=104 Identities=16% Similarity=0.192 Sum_probs=65.5
Q ss_pred CCCCCCEEEeecC------CCChHHHHHHHHHhcCCCCCCCCC-eEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccc
Q 004759 75 DVQPDHFVLDMCA------APGSKTFQLLEIIHQSTNPGALPN-GMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQ 147 (732)
Q Consensus 75 d~~pg~~VLDmCA------APGsKT~qLae~l~~~~~~~~~p~-G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~ 147 (732)
-+--|++|||++| |||+. .+..+. |. |.|||+|+.+-- ...+ .++.+|..
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS~---VLr~~~--------p~g~~VVavDL~~~~-----------sda~-~~IqGD~~ 162 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGTA---VLRQWL--------PTGTLLVDSDLNDFV-----------SDAD-STLIGDCA 162 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHH---HHHHHS--------CTTCEEEEEESSCCB-----------CSSS-EEEESCGG
T ss_pred eecCCCEEEeCCCCCCCCCCCcHH---HHHHhC--------CCCcEEEEeeCcccc-----------cCCC-eEEEcccc
Confidence 4556999999998 99992 334443 34 599999984311 0122 33566643
Q ss_pred cCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccC
Q 004759 148 HFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKV 227 (732)
Q Consensus 148 ~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKp 227 (732)
.+ ....+||+||.|.-...+|.. .-+ ..+...+-..+|.-|.+.|++
T Consensus 163 ~~----------------------~~~~k~DLVISDMAPNtTG~~--D~d---------~~Rs~~L~ElALdfA~~~Lkp 209 (344)
T 3r24_A 163 TV----------------------HTANKWDLIISDMYDPRTKHV--TKE---------NDSKEGFFTYLCGFIKQKLAL 209 (344)
T ss_dssp GE----------------------EESSCEEEEEECCCCTTSCSS--CSC---------CCCCCTHHHHHHHHHHHHEEE
T ss_pred cc----------------------ccCCCCCEEEecCCCCcCCcc--ccc---------hhHHHHHHHHHHHHHHHhCcC
Confidence 31 113679999999877777761 111 111122344567778889999
Q ss_pred CCEEEEE
Q 004759 228 GGRIVYS 234 (732)
Q Consensus 228 GGrLVYS 234 (732)
||.+|.=
T Consensus 210 GGsFvVK 216 (344)
T 3r24_A 210 GGSIAVK 216 (344)
T ss_dssp EEEEEEE
T ss_pred CCEEEEE
Confidence 9999853
No 281
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.39 E-value=0.00013 Score=75.21 Aligned_cols=65 Identities=25% Similarity=0.293 Sum_probs=54.2
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCC
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 150 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp 150 (732)
..+++.++++|||+|||+|..|..|++. +.+.|+|+|+|+..+..+.++ +..++.+.++|+..++
T Consensus 25 ~~~~~~~~~~VLDiG~G~G~lt~~L~~~----------~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~ 89 (249)
T 3ftd_A 25 EELNIEEGNTVVEVGGGTGNLTKVLLQH----------PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFP 89 (249)
T ss_dssp HHTTCCTTCEEEEEESCHHHHHHHHTTS----------CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCC
T ss_pred HhcCCCCcCEEEEEcCchHHHHHHHHHc----------CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCC
Confidence 4567889999999999999999988664 236899999999999988775 3467899999988764
No 282
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.34 E-value=0.00038 Score=74.30 Aligned_cols=104 Identities=16% Similarity=0.136 Sum_probs=72.2
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
++.++.+|||++||+|..+..+++.. |...++++|+ +..+..+++ .+++.+..+|... +
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~---- 243 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETF---------PKLKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT-S---- 243 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT-C----
T ss_pred ccccCceEEEeCCCccHHHHHHHHHC---------CCCeEEEeeC-HHHHhhccc------CCCcEEEeccccC-C----
Confidence 35678899999999999999998863 3568999999 766654332 2457777777643 1
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccC---CCEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKV---GGRI 231 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKp---GGrL 231 (732)
. ..||.|++- . +...|.. ....++|+++.+.||| ||+|
T Consensus 244 -----------------~--p~~D~v~~~------~-------~lh~~~d-------~~~~~~l~~~~~~L~p~~~gG~l 284 (352)
T 1fp2_A 244 -----------------I--PNADAVLLK------Y-------ILHNWTD-------KDCLRILKKCKEAVTNDGKRGKV 284 (352)
T ss_dssp -----------------C--CCCSEEEEE------S-------CGGGSCH-------HHHHHHHHHHHHHHSGGGCCCEE
T ss_pred -----------------C--CCccEEEee------h-------hhccCCH-------HHHHHHHHHHHHhCCCCCCCcEE
Confidence 0 139999972 1 1122211 1234789999999999 9999
Q ss_pred EEEcCCC
Q 004759 232 VYSTCSM 238 (732)
Q Consensus 232 VYSTCSl 238 (732)
+.+...+
T Consensus 285 ~i~e~~~ 291 (352)
T 1fp2_A 285 TIIDMVI 291 (352)
T ss_dssp EEEECEE
T ss_pred EEEEeec
Confidence 9876554
No 283
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.30 E-value=0.00084 Score=72.38 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=72.3
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
..++.+|||++||+|..+..+++.. |...++++|+ +..+..++. .+++.+..+|... |.
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~-~~---- 257 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY---------PTIKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFK-EV---- 257 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CC----
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC---------CCCeEEEecC-HHHHHhhhh------cCCeEEEeCCcCC-CC----
Confidence 6778999999999999999998874 4568899999 554433221 2578888887654 21
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
. .. |.|++-- +...|.. ..-.++|+++.+.|||||+|+...
T Consensus 258 -----------------p-~~-D~v~~~~-------------vlh~~~d-------~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 258 -----------------P-SG-DTILMKW-------------ILHDWSD-------QHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp -----------------C-CC-SEEEEES-------------CGGGSCH-------HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred -----------------C-CC-CEEEehH-------------HhccCCH-------HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 0 12 8888611 2223322 223578999999999999999876
Q ss_pred CCCC
Q 004759 236 CSMN 239 (732)
Q Consensus 236 CSln 239 (732)
..+.
T Consensus 299 ~~~~ 302 (364)
T 3p9c_A 299 CILP 302 (364)
T ss_dssp CCBC
T ss_pred eccC
Confidence 6554
No 284
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.21 E-value=0.00021 Score=68.10 Aligned_cols=118 Identities=14% Similarity=0.105 Sum_probs=72.2
Q ss_pred hcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 73 FLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
-+++++|++|||+++|.. ++|+++.++..++++.. .++.+...|+..++..
T Consensus 7 ~~g~~~g~~vL~~~~g~v-------------------------~vD~s~~ml~~a~~~~~----~~~~~~~~d~~~~~~~ 57 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKSS-------------------------PVEALKGLVDKLQALTG----NEGRVSVENIKQLLQS 57 (176)
T ss_dssp TTTCCTTSEEEEEECTTS-------------------------CHHHHHHHHHHHHHHTT----TTSEEEEEEGGGGGGG
T ss_pred ccCCCCCCEEEEecCCce-------------------------eeeCCHHHHHHHHHhcc----cCcEEEEechhcCccc
Confidence 357899999999998741 26777777777766432 2467777777664320
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
......||.|++-. ++... .+. ..++|+++.++|||||+++
T Consensus 58 ------------------~~~~~~fD~V~~~~------~l~~~-------~~~--------~~~~l~~~~r~LkpgG~l~ 98 (176)
T 2ld4_A 58 ------------------AHKESSFDIILSGL------VPGST-------TLH--------SAEILAEIARILRPGGCLF 98 (176)
T ss_dssp ------------------CCCSSCEEEEEECC------STTCC-------CCC--------CHHHHHHHHHHEEEEEEEE
T ss_pred ------------------cCCCCCEeEEEECC------hhhhc-------ccC--------HHHHHHHHHHHCCCCEEEE
Confidence 01236799999721 11110 000 1468999999999999999
Q ss_pred EEcCCCCC------cCcHHHHHHHHHHCCCcEE
Q 004759 233 YSTCSMNP------VENEAVVAEILRKCEGSVE 259 (732)
Q Consensus 233 YSTCSlnp------~ENEaVV~~~L~~~~~~ve 259 (732)
.+.-.... .-..+-+...|++.|- ++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 99 LKEPVETAVDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp EEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred EEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence 85321110 0124556677777765 44
No 285
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.18 E-value=0.00016 Score=74.66 Aligned_cols=66 Identities=12% Similarity=0.052 Sum_probs=51.9
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCC
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 150 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp 150 (732)
..+++.++++|||+|||+|..|. ++ . . +.+.|+|+|+|+..+..+++++... +++.+.++|+..++
T Consensus 15 ~~~~~~~~~~VLEIG~G~G~lt~-l~-~-~--------~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 15 SAINPQKGQAMVEIGPGLAALTE-PV-G-E--------RLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHCCCTTCCEEEECCTTTTTHH-HH-H-T--------TCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCC
T ss_pred HhcCCCCcCEEEEECCCCcHHHH-hh-h-C--------CCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCC
Confidence 34578899999999999999999 53 2 1 1234999999999999988766432 57999999987754
No 286
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.14 E-value=0.0013 Score=69.58 Aligned_cols=117 Identities=15% Similarity=0.139 Sum_probs=82.3
Q ss_pred hhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc-----CCCceEEEec
Q 004759 70 PPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-----CTANLIVTNH 144 (732)
Q Consensus 70 p~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl-----g~~ni~Vt~~ 144 (732)
+++++.+.| .+||=++.|-|+.+..++..- +-..|+.+|+|+.-+++++.-+..+ .-+++.+...
T Consensus 76 ~~l~~~p~p-k~VLIiGgGdG~~~revlk~~---------~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~ 145 (294)
T 3o4f_A 76 VPLLAHGHA-KHVLIIGGGDGAMLREVTRHK---------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVID 145 (294)
T ss_dssp HHHHHSSCC-CEEEEESCTTSHHHHHHHTCT---------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES
T ss_pred HHHhhCCCC-CeEEEECCCchHHHHHHHHcC---------CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEec
Confidence 345555554 589999999999877765531 2468999999999999988776442 2367999999
Q ss_pred ccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhh
Q 004759 145 EAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISL 224 (732)
Q Consensus 145 Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~l 224 (732)
||..|-.- ...+||.|++|.+- ..|. . ..| ...+..+.+.+.
T Consensus 146 Dg~~~l~~--------------------~~~~yDvIi~D~~d-p~~~-------------~--~~L--~t~eFy~~~~~~ 187 (294)
T 3o4f_A 146 DGVNFVNQ--------------------TSQTFDVIISDCTD-PIGP-------------G--ESL--FTSAFYEGCKRC 187 (294)
T ss_dssp CTTTTTSC--------------------SSCCEEEEEESCCC-CCCT-------------T--CCS--SCCHHHHHHHHT
T ss_pred hHHHHHhh--------------------ccccCCEEEEeCCC-cCCC-------------c--hhh--cCHHHHHHHHHH
Confidence 99987431 12679999999862 1121 1 111 223556777889
Q ss_pred ccCCCEEEEE
Q 004759 225 LKVGGRIVYS 234 (732)
Q Consensus 225 LKpGGrLVYS 234 (732)
|+|||.+|.-
T Consensus 188 L~p~Gv~v~q 197 (294)
T 3o4f_A 188 LNPGGIFVAQ 197 (294)
T ss_dssp EEEEEEEEEE
T ss_pred hCCCCEEEEe
Confidence 9999999964
No 287
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.11 E-value=0.0026 Score=65.26 Aligned_cols=37 Identities=16% Similarity=0.137 Sum_probs=30.9
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCC
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLD 120 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid 120 (732)
.++|+++|||++|||||+|..++...+ ...|+|+|+-
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g---------~~~V~avdvG 111 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKK---------VTEVRGYTKG 111 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTT---------EEEEEEECCC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcC---------CCEEEEEecC
Confidence 468999999999999999988876643 3589999984
No 288
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.04 E-value=0.0013 Score=70.19 Aligned_cols=104 Identities=18% Similarity=0.169 Sum_probs=70.9
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
+..++.+|||++||+|..+..+++.. |...++++|+ +..+..++. .+++.+..+|... +.
T Consensus 190 ~~~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~--- 249 (358)
T 1zg3_A 190 VFEGLESLVDVGGGTGGVTKLIHEIF---------PHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-SI--- 249 (358)
T ss_dssp HHHTCSEEEEETCTTSHHHHHHHHHC---------TTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-CC---
T ss_pred hccCCCEEEEECCCcCHHHHHHHHHC---------CCCeEEEecc-HHHHhhccc------CCCcEEEeCccCC-CC---
Confidence 34567899999999999999998874 3568999998 554432221 2567777776543 20
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccC---CCEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKV---GGRI 231 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKp---GGrL 231 (732)
..||.|++-- ++..|.. ....++|+++.+.||| ||+|
T Consensus 250 --------------------~~~D~v~~~~-------------vlh~~~d-------~~~~~~l~~~~~~L~p~~~gG~l 289 (358)
T 1zg3_A 250 --------------------PSADAVLLKW-------------VLHDWND-------EQSLKILKNSKEAISHKGKDGKV 289 (358)
T ss_dssp --------------------CCCSEEEEES-------------CGGGSCH-------HHHHHHHHHHHHHTGGGGGGCEE
T ss_pred --------------------CCceEEEEcc-------------cccCCCH-------HHHHHHHHHHHHhCCCCCCCcEE
Confidence 2489999721 1122211 1234799999999999 9999
Q ss_pred EEEcCCC
Q 004759 232 VYSTCSM 238 (732)
Q Consensus 232 VYSTCSl 238 (732)
+.....+
T Consensus 290 ~i~e~~~ 296 (358)
T 1zg3_A 290 IIIDISI 296 (358)
T ss_dssp EEEECEE
T ss_pred EEEEecc
Confidence 9876554
No 289
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.01 E-value=0.0015 Score=71.35 Aligned_cols=144 Identities=16% Similarity=0.124 Sum_probs=88.4
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc-----C---CCceEEEecccccC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-----C---TANLIVTNHEAQHF 149 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl-----g---~~ni~Vt~~Da~~f 149 (732)
+..+||=++.|-|+....++.. +...|+.+|+|+.-++++++-+..+ . .+++.+...||..|
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh----------~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~f 274 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL----------KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPV 274 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT----------CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhc----------CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHH
Confidence 4579999999999987766542 2468999999999999887654221 1 13477888888765
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
-.- ......+||.|++|++-...++ .|. .....-...+.+..+.+.|++||
T Consensus 275 l~~-----------------~~~~~~~yDvIIvDl~D~~~s~---~p~---------g~a~~Lft~eFy~~~~~~L~p~G 325 (381)
T 3c6k_A 275 LKR-----------------YAKEGREFDYVINDLTAVPIST---SPE---------EDSTWEFLRLILDLSMKVLKQDG 325 (381)
T ss_dssp HHH-----------------HHHHTCCEEEEEEECCSSCCCC---C-------------CHHHHHHHHHHHHHHTEEEEE
T ss_pred HHh-----------------hhhccCceeEEEECCCCCcccC---ccc---------CcchHHHHHHHHHHHHHhcCCCC
Confidence 320 0112357999999976221111 010 11122345778889999999999
Q ss_pred EEEE-EcCCCCCcCcHHHHHHHHHHCCCcEEEE
Q 004759 230 RIVY-STCSMNPVENEAVVAEILRKCEGSVELV 261 (732)
Q Consensus 230 rLVY-STCSlnp~ENEaVV~~~L~~~~~~velv 261 (732)
.+|. +.|-..+ +.-..+.+.|++.-..+...
T Consensus 326 Vlv~Q~~s~~~~-~~~~~i~~tl~~vF~~v~~~ 357 (381)
T 3c6k_A 326 KYFTQGNCVNLT-EALSLYEEQLGRLYCPVEFS 357 (381)
T ss_dssp EEEEEEEETTCH-HHHHHHHHHHTTSSSCEEEE
T ss_pred EEEEecCCCcch-hHHHHHHHHHHHhCCcceEe
Confidence 9985 4443332 22233445555544445443
No 290
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.93 E-value=0.001 Score=76.05 Aligned_cols=75 Identities=13% Similarity=0.081 Sum_probs=59.6
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
.+-+|||+|||.|-.|..||.. ...|+++|.++..+..++..+...|..++.+...++..+..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~-----------ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~------ 128 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK-----------GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIA------ 128 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHH------
T ss_pred CCCeEEEECCCCcHHHHHHHhC-----------CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhh------
Confidence 3569999999999999998875 36899999999999999988887776678888887765321
Q ss_pred CCCCCccccccccccccccccEEEe
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLC 182 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~ 182 (732)
......||+|+|
T Consensus 129 -------------~~~~~~fD~v~~ 140 (569)
T 4azs_A 129 -------------ALEEGEFDLAIG 140 (569)
T ss_dssp -------------HCCTTSCSEEEE
T ss_pred -------------hccCCCccEEEE
Confidence 112367999997
No 291
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.86 E-value=0.0039 Score=65.55 Aligned_cols=136 Identities=13% Similarity=0.052 Sum_probs=95.2
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCH--------------------------HHHHHHHHHHH
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDV--------------------------QRCNLLIHQTK 132 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~--------------------------~Rl~~L~~n~k 132 (732)
...||.++.+-|.-++.+++++.... .+.+.|+++|... .+...++.+++
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g----~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~ 182 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHD----VRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFR 182 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTT----CCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHH
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcC----CCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHH
Confidence 44999999999999999998875310 1257899999631 15677889999
Q ss_pred HcCC--CceEEEeccccc-CCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccc
Q 004759 133 RMCT--ANLIVTNHEAQH-FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNG 209 (732)
Q Consensus 133 Rlg~--~ni~Vt~~Da~~-fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~ 209 (732)
+.|. .++.+..+++.. +|.+ ....||.|.+|+-
T Consensus 183 ~~gl~~~~I~li~Gda~etL~~~--------------------~~~~~d~vfIDaD------------------------ 218 (282)
T 2wk1_A 183 NYDLLDEQVRFLPGWFKDTLPTA--------------------PIDTLAVLRMDGD------------------------ 218 (282)
T ss_dssp HTTCCSTTEEEEESCHHHHSTTC--------------------CCCCEEEEEECCC------------------------
T ss_pred HcCCCcCceEEEEeCHHHHHhhC--------------------CCCCEEEEEEcCC------------------------
Confidence 9997 689999998865 2211 1257999999862
Q ss_pred hHHHHHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCCCcEEEEec
Q 004759 210 LHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 263 (732)
Q Consensus 210 L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~~~velvd~ 263 (732)
...-....|...+.+|++||.||.=-....+.+.+ -|.+++++.+-.+.+..+
T Consensus 219 ~y~~~~~~Le~~~p~L~pGGiIv~DD~~~~~G~~~-Av~Ef~~~~~i~~~i~~~ 271 (282)
T 2wk1_A 219 LYESTWDTLTNLYPKVSVGGYVIVDDYMMCPPCKD-AVDEYRAKFDIADELITI 271 (282)
T ss_dssp SHHHHHHHHHHHGGGEEEEEEEEESSCTTCHHHHH-HHHHHHHHTTCCSCCEEC
T ss_pred ccccHHHHHHHHHhhcCCCEEEEEcCCCCCHHHHH-HHHHHHHhcCCceEEEEe
Confidence 11123467888999999999999655443454443 446677777655544443
No 292
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.79 E-value=0.0047 Score=67.36 Aligned_cols=87 Identities=13% Similarity=0.161 Sum_probs=58.8
Q ss_pred CEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCCC
Q 004759 80 HFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFS 159 (732)
Q Consensus 80 ~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~~ 159 (732)
.+|||+|||.|+.+.-+..+ + --.|+|+|+++..+..+++|. ++..+.+.|...+..-.+.
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G---------~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~---- 63 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-G---------FDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIK---- 63 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-T---------CEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHH----
T ss_pred CeEEEEccCcCHHHHHHHHC-C---------CcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHH----
Confidence 58999999999999887654 1 246889999999999988763 3456667777664321000
Q ss_pred CCCccccccccccccccccEEEecCCCCCCCcccc
Q 004759 160 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRK 194 (732)
Q Consensus 160 ~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk 194 (732)
........+|.|+.++||-+.-...+
T Consensus 64 ---------~~~~~~~~~D~i~ggpPCQ~fS~ag~ 89 (376)
T 3g7u_A 64 ---------GFFKNDMPIDGIIGGPPCQGFSSIGK 89 (376)
T ss_dssp ---------HHHCSCCCCCEEEECCCCCTTC----
T ss_pred ---------hhcccCCCeeEEEecCCCCCcccccC
Confidence 00001257999999999988765543
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.76 E-value=0.0049 Score=65.07 Aligned_cols=38 Identities=13% Similarity=0.045 Sum_probs=30.9
Q ss_pred CCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCH
Q 004759 75 DVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDV 121 (732)
Q Consensus 75 d~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~ 121 (732)
.+++++.|||++|||||+|..++...+ ...|+|+|+-.
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~g---------v~~V~avdvG~ 128 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKR---------VQEVRGYTKGG 128 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTT---------EEEEEEECCCS
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcC---------CCEEEEEEcCC
Confidence 357899999999999999988766533 35899999843
No 294
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.62 E-value=0.0018 Score=69.68 Aligned_cols=83 Identities=18% Similarity=0.203 Sum_probs=53.1
Q ss_pred CEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCCC
Q 004759 80 HFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFS 159 (732)
Q Consensus 80 ~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~~ 159 (732)
.+|||+|||.|+.+..+..+ +- .-..|+|+|+++..+...++|.. +..+.+.|...+..-
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~-G~-------~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~------- 62 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRES-CI-------PAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLE------- 62 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHH-TC-------SEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHH-------
T ss_pred CeEEEeCcCccHHHHHHHHC-CC-------CceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHh-------
Confidence 58999999999999887654 10 01379999999999999988753 333556666654210
Q ss_pred CCCccccccccccccccccEEEecCCCCCCCccc
Q 004759 160 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 193 (732)
Q Consensus 160 ~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlr 193 (732)
......+|.|+.++||-+.....
T Consensus 63 -----------~~~~~~~D~l~~gpPCq~fS~ag 85 (343)
T 1g55_A 63 -----------EFDRLSFDMILMSPPCQPFTRIG 85 (343)
T ss_dssp -----------HHHHHCCSEEEECCC--------
T ss_pred -----------HcCcCCcCEEEEcCCCcchhhcC
Confidence 01112699999999998877654
No 295
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.58 E-value=0.0046 Score=71.81 Aligned_cols=125 Identities=12% Similarity=0.113 Sum_probs=82.3
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~~~~~~ 157 (732)
+..|||++||.|-.+...+.+.... ...-+|+|+|.++. +..+.+..+..+.. .|.|+.+|...+. +
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~-----~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkVtVI~gd~eev~---L--- 425 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQA-----DRRIKLYAVEKNPN-AVVTLENWQFEEWGSQVTVVSSDMREWV---A--- 425 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHT-----TCEEEEEEEESCHH-HHHHHHHHHHHTTGGGEEEEESCTTTCC---C---
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhc-----CCCcEEEEEECCHH-HHHHHHHHHhccCCCeEEEEeCcceecc---C---
Confidence 3479999999998844444433221 01347999999985 44555667777765 5889999887642 1
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 237 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS 237 (732)
..++|.|+...= |.+ .+...-..+|..+-++|||||.++=+.|+
T Consensus 426 ----------------PEKVDIIVSEwM----G~f----------------Ll~E~mlevL~Ardr~LKPgGimiPs~at 469 (637)
T 4gqb_A 426 ----------------PEKADIIVSELL----GSF----------------ADNELSPECLDGAQHFLKDDGVSIPGEYT 469 (637)
T ss_dssp ----------------SSCEEEEECCCC----BTT----------------BGGGCHHHHHHHHGGGEEEEEEEESCEEE
T ss_pred ----------------CcccCEEEEEcC----ccc----------------ccccCCHHHHHHHHHhcCCCcEEccccce
Confidence 268999997432 211 11112236788888999999999966666
Q ss_pred --CCCcCcHHHHHHHH
Q 004759 238 --MNPVENEAVVAEIL 251 (732)
Q Consensus 238 --lnp~ENEaVV~~~L 251 (732)
+.|++.+..-.+..
T Consensus 470 lyiapi~~~~l~~e~~ 485 (637)
T 4gqb_A 470 SFLAPISSSKLYNEVR 485 (637)
T ss_dssp EEEEEEECHHHHHHHH
T ss_pred EEEEEecCHHHHHHHH
Confidence 45888877655543
No 296
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.58 E-value=0.0044 Score=66.28 Aligned_cols=79 Identities=14% Similarity=0.064 Sum_probs=57.2
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNF 158 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~ 158 (732)
+.+|||+|||.|+.+..+..+ + --.|+|+|+++..+..+++|..... +.|...+..-
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G---------~~~v~~~e~d~~a~~t~~~N~~~~~-------~~Di~~~~~~------ 67 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G---------AECVYSNEWDKYAQEVYEMNFGEKP-------EGDITQVNEK------ 67 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T---------CEEEEEECCCHHHHHHHHHHHSCCC-------BSCGGGSCGG------
T ss_pred CCcEEEECCCcCHHHHHHHHC-C---------CeEEEEEeCCHHHHHHHHHHcCCCC-------cCCHHHcCHh------
Confidence 468999999999998887543 1 3579999999999999998863211 4555543210
Q ss_pred CCCCccccccccccccccccEEEecCCCCCCCcccc
Q 004759 159 SSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRK 194 (732)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk 194 (732)
....+|.|+.++||-+--...+
T Consensus 68 --------------~~~~~D~l~~gpPCQ~fS~ag~ 89 (327)
T 2c7p_A 68 --------------TIPDHDILCAGFPCQAFSISGK 89 (327)
T ss_dssp --------------GSCCCSEEEEECCCTTTCTTSC
T ss_pred --------------hCCCCCEEEECCCCCCcchhcc
Confidence 1135999999999998765544
No 297
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=96.55 E-value=0.0031 Score=73.71 Aligned_cols=136 Identities=11% Similarity=0.080 Sum_probs=87.3
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCC---C-CCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEecccccCCCCc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQST---N-PGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCR 153 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~---~-~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~-ni~Vt~~Da~~fp~~~ 153 (732)
+..|||++||.|-.+..++.+..... . .......+|+|+|.++.....++.... .+.. .|.|+.+|...+..-
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp- 487 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGI- 487 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHH-
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhcccc-
Confidence 35899999999999754443332100 0 000124599999999988777766554 5654 488999988764210
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
. ......++|.|++.-- |. ..+..+..+.|..+-++|||||.++=
T Consensus 488 ~---------------~~~~~ekVDIIVSElm----Gs----------------fl~nEL~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 488 A---------------KDRGFEQPDIIVSELL----GS----------------FGDNELSPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp H---------------HHTTCCCCSEEEECCC----BT----------------TBGGGSHHHHHHTTGGGSCTTCEEES
T ss_pred c---------------ccCCCCcccEEEEecc----cc----------------ccchhccHHHHHHHHHhCCCCcEEEC
Confidence 0 0011368999998432 21 12334556778888899999999995
Q ss_pred EcCC--CCCcCcHHHHHHHH
Q 004759 234 STCS--MNPVENEAVVAEIL 251 (732)
Q Consensus 234 STCS--lnp~ENEaVV~~~L 251 (732)
+.|+ +.|++.+..-..+.
T Consensus 533 ~~~t~ylaPi~~~~l~~~v~ 552 (745)
T 3ua3_A 533 QKYTSYVKPIMSTHIHQTIK 552 (745)
T ss_dssp CEEEEEEEEEECHHHHHHHH
T ss_pred CccEEEEEEecCHHHHHHHH
Confidence 5555 66899988755543
No 298
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.52 E-value=0.012 Score=62.61 Aligned_cols=133 Identities=17% Similarity=0.106 Sum_probs=81.4
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCe--EEEEEeCCHHH--------HHHHHHH-HHHc---CCCc--eE
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNG--MVIANDLDVQR--------CNLLIHQ-TKRM---CTAN--LI 140 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G--~VvAnDid~~R--------l~~L~~n-~kRl---g~~n--i~ 140 (732)
++.-+|||+|=|+|--++.....+... .+.. ..+++|.++-+ ...+.+. ..+. ...+ +.
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~-----~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~ 169 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEV-----NPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLK 169 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHH-----CTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEE
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHh-----CCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEE
Confidence 344589999999998765544333211 1233 45777763211 1111111 2222 1122 34
Q ss_pred EEeccccc-CCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHH
Q 004759 141 VTNHEAQH-FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAM 219 (732)
Q Consensus 141 Vt~~Da~~-fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~ 219 (732)
+..+|+.. ++.+ ....||.|++|+= .-++||++|.. .++.
T Consensus 170 l~~GDa~~~l~~l--------------------~~~~~Da~flDgF-----sP~kNPeLWs~--------------e~f~ 210 (308)
T 3vyw_A 170 VLLGDARKRIKEV--------------------ENFKADAVFHDAF-----SPYKNPELWTL--------------DFLS 210 (308)
T ss_dssp EEESCHHHHGGGC--------------------CSCCEEEEEECCS-----CTTTSGGGGSH--------------HHHH
T ss_pred EEechHHHHHhhh--------------------cccceeEEEeCCC-----CcccCcccCCH--------------HHHH
Confidence 45666654 2211 1246999999961 23789999874 6899
Q ss_pred HHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCCCcEEE
Q 004759 220 RGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVEL 260 (732)
Q Consensus 220 rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~~~vel 260 (732)
...++++|||+++--||+ ..|...|+..|-.|+-
T Consensus 211 ~l~~~~~pgg~laTYtaa-------g~VRR~L~~aGF~V~k 244 (308)
T 3vyw_A 211 LIKERIDEKGYWVSYSSS-------LSVRKSLLTLGFKVGS 244 (308)
T ss_dssp HHHTTEEEEEEEEESCCC-------HHHHHHHHHTTCEEEE
T ss_pred HHHHHhCCCcEEEEEeCc-------HHHHHHHHHCCCEEEe
Confidence 999999999999854554 7899999999855543
No 299
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.42 E-value=0.00079 Score=70.81 Aligned_cols=121 Identities=12% Similarity=0.022 Sum_probs=79.5
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNF 158 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~ 158 (732)
+..|||++||+|..+..++. . ...++.+|.+++.+..|++|++. ..++.|.+.|+..+....
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS---~--------~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l----- 153 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR---S--------QDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNAL----- 153 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC---T--------TSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHH-----
T ss_pred CCCceeEeCCcHHHHHHHcC---C--------CCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHh-----
Confidence 56799999999998877644 1 36899999999999999999865 357888888876532100
Q ss_pred CCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCC
Q 004759 159 SSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 238 (732)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSl 238 (732)
.....+||.|++|||.--.+.+ ..-.+.|..+. .+.++|+++. +
T Consensus 154 ------------~~~~~~fdLVfiDPPYe~k~~~-------------------~~vl~~L~~~~-~r~~~Gi~v~----W 197 (283)
T 2oo3_A 154 ------------LPPPEKRGLIFIDPSYERKEEY-------------------KEIPYAIKNAY-SKFSTGLYCV----W 197 (283)
T ss_dssp ------------CSCTTSCEEEEECCCCCSTTHH-------------------HHHHHHHHHHH-HHCTTSEEEE----E
T ss_pred ------------cCCCCCccEEEECCCCCCCcHH-------------------HHHHHHHHHhC-ccCCCeEEEE----E
Confidence 0112469999999995422211 11122333333 4567888874 3
Q ss_pred CCcCcHHHHHHHHHH
Q 004759 239 NPVENEAVVAEILRK 253 (732)
Q Consensus 239 np~ENEaVV~~~L~~ 253 (732)
.|+-+..-+..++++
T Consensus 198 YPi~~~~~~~~~~~~ 212 (283)
T 2oo3_A 198 YPVVNKAWTEQFLRK 212 (283)
T ss_dssp EEESSHHHHHHHHHH
T ss_pred EeccchHHHHHHHHH
Confidence 455565556666654
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.56 E-value=0.023 Score=59.41 Aligned_cols=48 Identities=17% Similarity=0.117 Sum_probs=41.0
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC 135 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg 135 (732)
.+|+.|||.+||+|..+..++.+ ...++++|+++..+..+++++++..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~-----------g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW-----------GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-----------CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 68999999999999977765543 3589999999999999999988763
No 301
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.95 E-value=0.025 Score=60.60 Aligned_cols=82 Identities=17% Similarity=0.196 Sum_probs=55.8
Q ss_pred CEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCCC
Q 004759 80 HFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFS 159 (732)
Q Consensus 80 ~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~~ 159 (732)
.+|+|+|||.|+.+.-+..+ +- ..-.|.|+|+++..+....+|.. ...+.+.|...+..-
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~-------~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~------- 63 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GL-------DGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQ------- 63 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TC-------SEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHH-------
T ss_pred CEEEEECcCccHHHHHHHHc-CC-------CceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHH-------
Confidence 37999999999998877554 10 01358899999999999887642 223445665553210
Q ss_pred CCCccccccccccccccccEEEecCCCCCCCcc
Q 004759 160 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 192 (732)
Q Consensus 160 ~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtl 192 (732)
......+|.|+..+||-+--..
T Consensus 64 -----------~~~~~~~D~l~ggpPCQ~fS~a 85 (333)
T 4h0n_A 64 -----------VIKKWNVDTILMSPPCQPFTRN 85 (333)
T ss_dssp -----------HHHHTTCCEEEECCCCCCSEET
T ss_pred -----------HhccCCCCEEEecCCCcchhhh
Confidence 1112369999999999886443
No 302
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.80 E-value=0.036 Score=58.44 Aligned_cols=86 Identities=13% Similarity=0.087 Sum_probs=58.8
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeE-EEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCcc
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGM-VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~-VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~ 154 (732)
-+...+|||+|||.|+.+.-+..+ +- .-. |+|+|+++..+.....|. +...+...|...+..-.+
T Consensus 13 ~~~~~~vidLFaG~GG~~~g~~~a-G~--------~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~i~~~~i 78 (295)
T 2qrv_A 13 KRKPIRVLSLFDGIATGLLVLKDL-GI--------QVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRSVTQKHI 78 (295)
T ss_dssp CCCCEEEEEETCTTTHHHHHHHHT-TB--------CEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGGCCHHHH
T ss_pred cCCCCEEEEeCcCccHHHHHHHHC-CC--------ccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHHccHHHh
Confidence 355679999999999998776443 21 122 799999999999887763 334566677766432100
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCcc
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 192 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtl 192 (732)
.....+|.|+..+||-+--..
T Consensus 79 -----------------~~~~~~Dll~ggpPCQ~fS~a 99 (295)
T 2qrv_A 79 -----------------QEWGPFDLVIGGSPCNDLSIV 99 (295)
T ss_dssp -----------------HHTCCCSEEEECCCCGGGBTT
T ss_pred -----------------cccCCcCEEEecCCCcccccc
Confidence 011469999999999885443
No 303
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.66 E-value=0.068 Score=56.64 Aligned_cols=91 Identities=11% Similarity=0.006 Sum_probs=62.2
Q ss_pred CCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 75 DVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 75 d~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
.+++|++||-.+||+ |..++|+|.+++ ..|++.|.+++|.+.+ +.+|...+. .+...+
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~G----------a~Vi~~~~~~~~~~~~----~~lGa~~v~---~~~~~~---- 231 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMG----------AEVSVFARNEHKKQDA----LSMGVKHFY---TDPKQC---- 231 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTT----------CEEEEECSSSTTHHHH----HHTTCSEEE---SSGGGC----
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC----------CeEEEEeCCHHHHHHH----HhcCCCeec---CCHHHH----
Confidence 789999999998755 555666666542 4899999999998865 457866443 222111
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
...||.|+- |+|.. ..+..++++|++||++|.
T Consensus 232 --------------------~~~~D~vid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~ 263 (348)
T 3two_A 232 --------------------KEELDFIIS---TIPTH-------------------------YDLKDYLKLLTYNGDLAL 263 (348)
T ss_dssp --------------------CSCEEEEEE---CCCSC-------------------------CCHHHHHTTEEEEEEEEE
T ss_pred --------------------hcCCCEEEE---CCCcH-------------------------HHHHHHHHHHhcCCEEEE
Confidence 026898874 44432 125568899999999986
Q ss_pred E
Q 004759 234 S 234 (732)
Q Consensus 234 S 234 (732)
.
T Consensus 264 ~ 264 (348)
T 3two_A 264 V 264 (348)
T ss_dssp C
T ss_pred E
Confidence 4
No 304
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.61 E-value=0.063 Score=56.62 Aligned_cols=100 Identities=19% Similarity=0.167 Sum_probs=65.1
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
..+++|++||-.+||+ |..++|+|..++ ..|++.|.+.+|++.+ +++|...+ ++.....+..
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G----------a~Vi~~~~~~~~~~~~----~~lGa~~~--i~~~~~~~~~- 224 (340)
T 3s2e_A 162 TDTRPGQWVVISGIGGLGHVAVQYARAMG----------LRVAAVDIDDAKLNLA----RRLGAEVA--VNARDTDPAA- 224 (340)
T ss_dssp TTCCTTSEEEEECCSTTHHHHHHHHHHTT----------CEEEEEESCHHHHHHH----HHTTCSEE--EETTTSCHHH-
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC----------CeEEEEeCCHHHHHHH----HHcCCCEE--EeCCCcCHHH-
Confidence 3678999999998876 667777777643 4899999999998865 45776532 2222111100
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
........+|.|+- |+|.+ ..+..++++|++||++|
T Consensus 225 ----------------~~~~~~g~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~iv 260 (340)
T 3s2e_A 225 ----------------WLQKEIGGAHGVLV---TAVSP-------------------------KAFSQAIGMVRRGGTIA 260 (340)
T ss_dssp ----------------HHHHHHSSEEEEEE---SSCCH-------------------------HHHHHHHHHEEEEEEEE
T ss_pred ----------------HHHHhCCCCCEEEE---eCCCH-------------------------HHHHHHHHHhccCCEEE
Confidence 00001136898875 33322 24677899999999998
Q ss_pred EE
Q 004759 233 YS 234 (732)
Q Consensus 233 YS 234 (732)
..
T Consensus 261 ~~ 262 (340)
T 3s2e_A 261 LN 262 (340)
T ss_dssp EC
T ss_pred Ee
Confidence 64
No 305
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.47 E-value=0.063 Score=56.44 Aligned_cols=77 Identities=8% Similarity=0.058 Sum_probs=55.3
Q ss_pred CEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCCC
Q 004759 80 HFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFS 159 (732)
Q Consensus 80 ~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~~ 159 (732)
++|||++||.||.+.-+-++ + --.|.|+|+++..+.+.++|. +. .+..+|...+..-
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G---------~~~v~a~e~d~~a~~ty~~N~-----~~-~~~~~DI~~i~~~------- 57 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-G---------FRIICANEYDKSIWKTYESNH-----SA-KLIKGDISKISSD------- 57 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-T---------CEEEEEEECCTTTHHHHHHHC-----CS-EEEESCGGGCCGG-------
T ss_pred CeEEEeCcCccHHHHHHHHC-C---------CEEEEEEeCCHHHHHHHHHHC-----CC-CcccCChhhCCHh-------
Confidence 47999999999988776432 1 246889999999999998873 22 3456776654221
Q ss_pred CCCccccccccccccccccEEEecCCCCCCCcc
Q 004759 160 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 192 (732)
Q Consensus 160 ~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtl 192 (732)
....+|.|+.-+||-+.=+.
T Consensus 58 -------------~~~~~D~l~ggpPCQ~fS~a 77 (331)
T 3ubt_Y 58 -------------EFPKCDGIIGGPPSQSWSEG 77 (331)
T ss_dssp -------------GSCCCSEEECCCCGGGTEET
T ss_pred -------------hCCcccEEEecCCCCCcCCC
Confidence 12468999999999886443
No 306
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.46 E-value=0.068 Score=57.16 Aligned_cols=51 Identities=20% Similarity=0.266 Sum_probs=39.4
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
+++++|++||-.+||+ |..++|+|..++ ...|++.|.+.+|+++++ .+|..
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G---------a~~Vi~~~~~~~~~~~a~----~lGa~ 237 (371)
T 1f8f_A 186 LKVTPASSFVTWGAGAVGLSALLAAKVCG---------ASIIIAVDIVESRLELAK----QLGAT 237 (371)
T ss_dssp TCCCTTCEEEEESCSHHHHHHHHHHHHHT---------CSEEEEEESCHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCeEEEECCCHHHHHHHH----HcCCC
Confidence 4689999999998766 666777777653 237999999999988764 46754
No 307
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.41 E-value=0.098 Score=57.39 Aligned_cols=68 Identities=16% Similarity=0.088 Sum_probs=54.3
Q ss_pred hhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc---CC-CceEEEeccc
Q 004759 72 LFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM---CT-ANLIVTNHEA 146 (732)
Q Consensus 72 llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl---g~-~ni~Vt~~Da 146 (732)
.++.+++++.|+|++|.-|..|..++..+.. +.+.|+|+|.++.-+..|++|++.+ +. .++.+.+...
T Consensus 220 ~i~~l~~~~~viDvGAn~G~~s~~~a~~~~~-------~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 220 GLLRFSDSEKMVDCGASIGESLAGLIGVTKG-------KFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp SSCCCCSSCEEEEETCTTSHHHHHHHHHHTS-------CCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred cccccCCCCEEEECCCCcCHHHHHHHHHhcC-------CCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 3456799999999999999999988844332 2489999999999999999999882 35 7777766543
No 308
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.29 E-value=0.072 Score=57.22 Aligned_cols=105 Identities=17% Similarity=0.160 Sum_probs=64.8
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
.++++|++||=.+||+ |..++|+|.+++ ...|++.|.+++|..+++ .+|...+ .+.....+...
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~ 242 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAG---------ATTVILSTRQATKRRLAE----EVGATAT--VDPSAGDVVEA 242 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEECSCHHHHHHHH----HHTCSEE--ECTTSSCHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEECCCHHHHHHHH----HcCCCEE--ECCCCcCHHHH
Confidence 4789999999998755 555666666543 248999999999988654 4776532 22211111000
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
+.. ........||.|+- |+|.+ ..+..++++|++||++|
T Consensus 243 -i~~------------~~~~~~gg~Dvvid---~~G~~-------------------------~~~~~~~~~l~~~G~vv 281 (370)
T 4ej6_A 243 -IAG------------PVGLVPGGVDVVIE---CAGVA-------------------------ETVKQSTRLAKAGGTVV 281 (370)
T ss_dssp -HHS------------TTSSSTTCEEEEEE---CSCCH-------------------------HHHHHHHHHEEEEEEEE
T ss_pred -HHh------------hhhccCCCCCEEEE---CCCCH-------------------------HHHHHHHHHhccCCEEE
Confidence 000 00011237999984 45533 24677899999999998
Q ss_pred EE
Q 004759 233 YS 234 (732)
Q Consensus 233 YS 234 (732)
..
T Consensus 282 ~~ 283 (370)
T 4ej6_A 282 IL 283 (370)
T ss_dssp EC
T ss_pred EE
Confidence 63
No 309
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=94.27 E-value=0.17 Score=55.15 Aligned_cols=53 Identities=17% Similarity=0.221 Sum_probs=35.7
Q ss_pred CCEEEeecCCCChHHHHHHHHHhc----CC--CCCCCCCeEEEEEeCCHHHHHHHHHHH
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQ----ST--NPGALPNGMVIANDLDVQRCNLLIHQT 131 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~----~~--~~~~~p~G~VvAnDid~~Rl~~L~~n~ 131 (732)
..+|+|++||+|.-|+.++..+-. .. .....|.-.|+.||+-..-...|-..+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L 111 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLL 111 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhh
Confidence 589999999999999998654422 00 001135688999998666666555543
No 310
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.26 E-value=0.078 Score=56.42 Aligned_cols=52 Identities=23% Similarity=0.211 Sum_probs=38.8
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
+++++|++||-.+||+ |..++|+|..++ ...|++.|.+.+|+.+++ .+|...
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~a~----~lGa~~ 219 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMG---------AAQVVVTDLSATRLSKAK----EIGADL 219 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEECCCHHHHHHHH----HhCCCE
Confidence 4789999999998765 555667766543 248999999999988653 577653
No 311
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.22 E-value=0.036 Score=59.27 Aligned_cols=79 Identities=11% Similarity=0.099 Sum_probs=53.5
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEE-EEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMV-IANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~V-vAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
..+|+|+|||.|+.+.-+..+ + ...-.| .|+|+|+..+++..+|.. . . +.+.|...+..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G-------~~~~~v~~a~e~d~~a~~ty~~N~~---~--~-~~~~DI~~~~~------ 69 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-S-------ININATFIPFDINEIANKIYSKNFK---E--E-VQVKNLDSISI------ 69 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-S-------CCCCEEEEEECCCHHHHHHHHHHHC---C--C-CBCCCTTTCCH------
T ss_pred CCEEEEECCChhHHHHHHHHc-C-------CCceEEEEEEECCHHHHHHHHHHCC---C--C-cccCChhhcCH------
Confidence 458999999999988776443 1 001256 799999999999988752 1 1 33455544321
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGD 189 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGd 189 (732)
.......+|.|+..+||-+-
T Consensus 70 ------------~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 70 ------------KQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp ------------HHHHHTCCCEEEECCCCTTC
T ss_pred ------------HHhccCCCCEEEecCCccCc
Confidence 01111369999999999987
No 312
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.19 E-value=0.051 Score=55.68 Aligned_cols=49 Identities=16% Similarity=0.264 Sum_probs=38.8
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC 135 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg 135 (732)
..+|+.|||.+||+|+.+..++. + ...++++|+++..+..++.+++..+
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~-~----------gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKK-L----------GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHH-T----------TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCCCEEEECCCCCCHHHHHHHH-c----------CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 37899999999999986555443 3 3589999999999999999887554
No 313
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.98 E-value=0.14 Score=55.28 Aligned_cols=50 Identities=24% Similarity=0.246 Sum_probs=39.9
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT 136 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~ 136 (732)
+++++|++||-.+||+ |..++|+|..++ .+.|++.|.+.+|++.++ ++|.
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~a~----~lGa 231 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLG---------AACVIVGDQNPERLKLLS----DAGF 231 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHT---------CSEEEEEESCHHHHHHHH----TTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEEcCCHHHHHHHH----HcCC
Confidence 4789999999999876 677888887753 248999999999987653 4675
No 314
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=93.97 E-value=0.43 Score=52.14 Aligned_cols=42 Identities=26% Similarity=0.214 Sum_probs=29.0
Q ss_pred CCEEEeecCCCChHHHHHHHHH----hcCCC----CCCCCCeEEEEEeCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEII----HQSTN----PGALPNGMVIANDLD 120 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l----~~~~~----~~~~p~G~VvAnDid 120 (732)
..+|+|++|+.|.-|+.++..+ ..... ....|.-.|+.||+-
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp 102 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLF 102 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCC
Confidence 4799999999999999887653 22110 001357899999986
No 315
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.88 E-value=0.09 Score=55.57 Aligned_cols=101 Identities=19% Similarity=0.160 Sum_probs=65.4
Q ss_pred CCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCc
Q 004759 75 DVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCR 153 (732)
Q Consensus 75 d~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~ 153 (732)
.+++|++||=.+||+ |..++|+|.+++ ...|++.|.+.+|++++ +++|...+ ++.+. .+.. .
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g---------~~~Vi~~~~~~~~~~~~----~~lGa~~~--i~~~~-~~~~-~ 230 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS---------AARVIAVDLDDDRLALA----REVGADAA--VKSGA-GAAD-A 230 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC---------CCEEEEEESCHHHHHHH----HHTTCSEE--EECST-THHH-H
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEEcCCHHHHHHH----HHcCCCEE--EcCCC-cHHH-H
Confidence 688999999998765 666777777653 35899999999999876 45776543 22221 1100 0
Q ss_pred cCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEE
Q 004759 154 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 233 (732)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVY 233 (732)
+ ........||.|+- |+|.. ..+..++++|++||++|.
T Consensus 231 v--------------~~~t~g~g~d~v~d---~~G~~-------------------------~~~~~~~~~l~~~G~iv~ 268 (345)
T 3jv7_A 231 I--------------RELTGGQGATAVFD---FVGAQ-------------------------STIDTAQQVVAVDGHISV 268 (345)
T ss_dssp H--------------HHHHGGGCEEEEEE---SSCCH-------------------------HHHHHHHHHEEEEEEEEE
T ss_pred H--------------HHHhCCCCCeEEEE---CCCCH-------------------------HHHHHHHHHHhcCCEEEE
Confidence 0 00011247999885 44421 246778999999999986
Q ss_pred E
Q 004759 234 S 234 (732)
Q Consensus 234 S 234 (732)
.
T Consensus 269 ~ 269 (345)
T 3jv7_A 269 V 269 (345)
T ss_dssp C
T ss_pred E
Confidence 3
No 316
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=93.73 E-value=0.093 Score=56.78 Aligned_cols=60 Identities=10% Similarity=0.051 Sum_probs=49.9
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHF 149 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~f 149 (732)
+++.||+++.|+|..|..|++... ...|+|+|+|..-+..|.+.. ...++.++++|+..+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~---------~~~vvavE~D~~l~~~L~~~~---~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYC---------PRQYSLLEKRSSLYKFLNAKF---EGSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC---------CSEEEEECCCHHHHHHHHHHT---TTSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCC---------CCEEEEEecCHHHHHHHHHhc---cCCCEEEEECCccch
Confidence 469999999999999999998642 258999999999888887765 246899999998554
No 317
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.72 E-value=0.057 Score=57.30 Aligned_cols=103 Identities=14% Similarity=0.180 Sum_probs=63.0
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC 152 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~ 152 (732)
.++++|++||=.+||+ |..++|+|.+++ ...|++.|.+.+|+++++ ++|... +++.....+...
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G---------a~~Vi~~~~~~~~~~~~~----~lGa~~--vi~~~~~~~~~~ 226 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLG---------AGRIFAVGSRKHCCDIAL----EYGATD--IINYKNGDIVEQ 226 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTTT---------CSSEEEECCCHHHHHHHH----HHTCCE--EECGGGSCHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC---------CcEEEEECCCHHHHHHHH----HhCCce--EEcCCCcCHHHH
Confidence 4789999999997654 444556655432 237999999999987664 477643 233222111100
Q ss_pred ccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 153 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
+ ........||.|+- |+|.. ..+..++++|++||++|
T Consensus 227 -v--------------~~~t~g~g~D~v~d---~~g~~-------------------------~~~~~~~~~l~~~G~~v 263 (352)
T 3fpc_A 227 -I--------------LKATDGKGVDKVVI---AGGDV-------------------------HTFAQAVKMIKPGSDIG 263 (352)
T ss_dssp -H--------------HHHTTTCCEEEEEE---CSSCT-------------------------THHHHHHHHEEEEEEEE
T ss_pred -H--------------HHHcCCCCCCEEEE---CCCCh-------------------------HHHHHHHHHHhcCCEEE
Confidence 0 00011246999984 44432 24667889999999998
Q ss_pred EE
Q 004759 233 YS 234 (732)
Q Consensus 233 YS 234 (732)
..
T Consensus 264 ~~ 265 (352)
T 3fpc_A 264 NV 265 (352)
T ss_dssp EC
T ss_pred Ee
Confidence 53
No 318
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.46 E-value=0.073 Score=57.16 Aligned_cols=52 Identities=15% Similarity=0.163 Sum_probs=38.9
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
.++++|++||=++||+ |..++|+|.+++ ...|++.|.+++|++++ +++|...
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~~G---------a~~Vi~~~~~~~~~~~a----~~lGa~~ 241 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKTAG---------ASRIIGIDIDSKKYETA----KKFGVNE 241 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHHHT---------CSCEEEECSCTTHHHHH----HTTTCCE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCeEEEEcCCHHHHHHH----HHcCCcE
Confidence 4689999999998754 556677776653 24799999999998865 4577653
No 319
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.45 E-value=0.2 Score=52.68 Aligned_cols=52 Identities=15% Similarity=0.056 Sum_probs=37.8
Q ss_pred cCCCCCCEEEeecCCCCh-HHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGS-KTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGs-KT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
..+++|++||=.+||+.+ .++|+|.+++ ...+++.|.+++|++++ +++|...
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G---------~~~vi~~~~~~~k~~~a----~~lGa~~ 208 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVALG---------AKSVTAIDISSEKLALA----KSFGAMQ 208 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHHTT---------CSEEEEEESCHHHHHHH----HHTTCSE
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHHcC---------CcEEEEEechHHHHHHH----HHcCCeE
Confidence 468999999999876544 3556665543 35789999999998765 4578653
No 320
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=93.29 E-value=0.25 Score=57.52 Aligned_cols=141 Identities=16% Similarity=0.112 Sum_probs=84.6
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcC--CCCC-CCCCeEEEEEeCCHHHHHHHHHHH-------------H-Hc-----
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQS--TNPG-ALPNGMVIANDLDVQRCNLLIHQT-------------K-RM----- 134 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~--~~~~-~~p~G~VvAnDid~~Rl~~L~~n~-------------k-Rl----- 134 (732)
++.-+|||+|-|.|--++.+.+..... .++. ....-.++++|..+-....|.+-+ . ..
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 455799999999999888887765320 0010 011357999999664444444311 1 11
Q ss_pred CC-----C----ceEEEecccccC-CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhccc
Q 004759 135 CT-----A----NLIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNV 204 (732)
Q Consensus 135 g~-----~----ni~Vt~~Da~~f-p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~ 204 (732)
|+ . .+.+..+|+... +.+. ......||.|++|+. .-.|||++|..
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~-----------------~~~~~~~da~flD~f-----~p~~np~~w~~--- 191 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLD-----------------DSLNNQVDAWFLDGF-----APAKNPDMWNE--- 191 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCC-----------------GGGTTCEEEEEECSS-----CC--CCTTCSH---
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcc-----------------cccCCceeEEEECCC-----CCCCChhhhhH---
Confidence 11 0 233344555431 1110 001257999999974 22589998863
Q ss_pred ccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCCCcEEE
Q 004759 205 GLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVEL 260 (732)
Q Consensus 205 ~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~~~vel 260 (732)
.++....+++++||++..-||. ..|...|.+.|..+.-
T Consensus 192 -----------~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~l~~aGf~~~~ 229 (689)
T 3pvc_A 192 -----------QLFNAMARMTRPGGTFSTFTAA-------GFVRRGLQQAGFNVTK 229 (689)
T ss_dssp -----------HHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHTTCEEEE
T ss_pred -----------HHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhCCeEEEe
Confidence 5677778899999998766665 4778888888755443
No 321
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.24 E-value=0.16 Score=53.76 Aligned_cols=50 Identities=18% Similarity=0.149 Sum_probs=37.0
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||-.+||+ |..++|+|..++ ..|++.|.+.+|+..++ .+|..
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G----------a~Vi~~~~~~~~~~~~~----~lGa~ 214 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAYG----------AFVVCTARSPRRLEVAK----NCGAD 214 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT----------CEEEEEESCHHHHHHHH----HTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC----------CEEEEEcCCHHHHHHHH----HhCCC
Confidence 4789999999998754 445666666542 35999999999988764 57765
No 322
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.08 E-value=0.15 Score=54.57 Aligned_cols=52 Identities=10% Similarity=0.033 Sum_probs=38.9
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
.++++|++||=.+||+ |..++|+|..++ ...|++.|.+.+|++.++ ++|...
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~a~----~lGa~~ 239 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAG---------ASRIIGVGTHKDKFPKAI----ELGATE 239 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHT---------CSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCeEEEECCCHHHHHHHH----HcCCcE
Confidence 4689999999998755 555677776653 237999999999988654 577653
No 323
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.02 E-value=0.13 Score=55.00 Aligned_cols=51 Identities=8% Similarity=0.001 Sum_probs=37.7
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
.++++|++||=.+||+ |.-++|+|..+ ...|++.|.+.+|+..+ +++|...
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~----------Ga~Vi~~~~~~~~~~~~----~~lGa~~ 236 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKAT----------GAEVIVTSSSREKLDRA----FALGADH 236 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHT----------TCEEEEEESCHHHHHHH----HHHTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc----------CCEEEEEecCchhHHHH----HHcCCCE
Confidence 4688999999998665 55566666653 24899999999998875 4577653
No 324
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.02 E-value=0.093 Score=56.66 Aligned_cols=50 Identities=22% Similarity=0.195 Sum_probs=38.3
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT 136 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~ 136 (732)
+++++|++||-++||+ |..++|+|..++ ...|++.|.+.+|+++++ .+|.
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~G---------a~~Vi~~~~~~~~~~~a~----~lGa 231 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLG---------AAVVIVGDLNPARLAHAK----AQGF 231 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEEESCHHHHHHHH----HTTC
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCC---------CCeEEEEcCCHHHHHHHH----HcCC
Confidence 4789999999988755 556777776643 247999999999998764 5776
No 325
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.97 E-value=0.14 Score=54.72 Aligned_cols=51 Identities=10% Similarity=0.040 Sum_probs=37.4
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||-.+||+ |..++|+|..++ ...|++.|.+++|++.+ +++|..
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G---------a~~Vi~~~~~~~~~~~~----~~lGa~ 238 (374)
T 2jhf_A 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAAG---------AARIIGVDINKDKFAKA----KEVGAT 238 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEECSCGGGHHHH----HHTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCeEEEEcCCHHHHHHH----HHhCCc
Confidence 4689999999998654 445666666542 23799999999998866 357764
No 326
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.94 E-value=0.15 Score=54.35 Aligned_cols=52 Identities=8% Similarity=0.097 Sum_probs=38.4
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
.++++|++||-.+||+ |..++|+|..++ ...|++.|.+.+|++.++ ++|...
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~~G---------a~~Vi~~~~~~~~~~~~~----~lGa~~ 238 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVAG---------ASRIIGVDINKDKFARAK----EFGATE 238 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHT---------CSEEEEECSCGGGHHHHH----HHTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCeEEEEcCCHHHHHHHH----HcCCce
Confidence 4689999999998654 455667766653 237999999999988764 467643
No 327
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.89 E-value=0.14 Score=54.87 Aligned_cols=51 Identities=14% Similarity=0.064 Sum_probs=37.2
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||-.+||+ |..++|+|..++ ...|++.|.+++|+..++ ++|..
T Consensus 188 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G---------a~~Vi~~~~~~~~~~~~~----~lGa~ 239 (374)
T 1cdo_A 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSAG---------AKRIIAVDLNPDKFEKAK----VFGAT 239 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEECSCGGGHHHHH----HTTCC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEEcCCHHHHHHHH----HhCCc
Confidence 4689999999998654 445666666542 237999999999998654 57764
No 328
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.78 E-value=0.18 Score=54.22 Aligned_cols=49 Identities=12% Similarity=0.058 Sum_probs=37.1
Q ss_pred CCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 75 DVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 75 d~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
++++|++||-.+||+ |..++|+|..++ ..|++.|.+++|+..++ .+|..
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~G----------a~Vi~~~~~~~~~~~a~----~lGa~ 240 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMG----------AHVVAFTTSEAKREAAK----ALGAD 240 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT----------CEEEEEESSGGGHHHHH----HHTCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC----------CEEEEEeCCHHHHHHHH----HcCCc
Confidence 789999999998765 555666666542 46999999999988764 46764
No 329
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=92.69 E-value=0.15 Score=54.52 Aligned_cols=51 Identities=16% Similarity=0.111 Sum_probs=37.1
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||=.+||+ |..++|+|..++ ...|++.|.+++|++.+ +++|..
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~a----~~lGa~ 242 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKIAG---------ASRIIAIDINGEKFPKA----KALGAT 242 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEECSCGGGHHHH----HHTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCeEEEEcCCHHHHHHH----HHhCCc
Confidence 4689999999998654 445566666542 24799999999998865 357764
No 330
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=91.99 E-value=0.14 Score=49.00 Aligned_cols=39 Identities=10% Similarity=0.012 Sum_probs=30.5
Q ss_pred CCCCEEEeecCCCC-hHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHH
Q 004759 77 QPDHFVLDMCAAPG-SKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCN 125 (732)
Q Consensus 77 ~pg~~VLDmCAAPG-sKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~ 125 (732)
.++.+||++++|+| .-+..|++.. .-.|+|.|+++..+.
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~----------g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS----------KVDLVLTDIKPSHGG 73 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS----------CCEEEEECSSCSSTT
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC----------CCeEEEEECCccccc
Confidence 55789999999999 4777777641 235999999988776
No 331
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.60 E-value=0.19 Score=53.71 Aligned_cols=97 Identities=14% Similarity=0.116 Sum_probs=60.4
Q ss_pred CCCEEEeecC-CC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 78 PDHFVLDMCA-AP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 78 pg~~VLDmCA-AP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
+|++||=.+| |+ |..++|+|..+. ...|++.|.+.+|++.++ ++|...+ .+... .+.. .+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~---------g~~Vi~~~~~~~~~~~~~----~lGad~v--i~~~~-~~~~-~v- 232 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT---------DLTVIATASRPETQEWVK----SLGAHHV--IDHSK-PLAA-EV- 232 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC---------CSEEEEECSSHHHHHHHH----HTTCSEE--ECTTS-CHHH-HH-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc---------CCEEEEEeCCHHHHHHHH----HcCCCEE--EeCCC-CHHH-HH-
Confidence 8999997763 32 555667766543 358999999999988764 4776533 22211 1100 00
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
.......||.|+- |+|.. ..+..++++|++||++|..
T Consensus 233 --------------~~~~~~g~Dvvid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 233 --------------AALGLGAPAFVFS---TTHTD-------------------------KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp --------------HTTCSCCEEEEEE---CSCHH-------------------------HHHHHHHHHSCTTCEEEEC
T ss_pred --------------HHhcCCCceEEEE---CCCch-------------------------hhHHHHHHHhcCCCEEEEE
Confidence 0012257998875 44422 2467789999999999864
No 332
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=91.36 E-value=0.14 Score=54.43 Aligned_cols=47 Identities=21% Similarity=0.159 Sum_probs=35.4
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHH
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIH 129 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~ 129 (732)
.++++|++||=.+||+ |..++|+|.+++ ...|++.|.+++|++++++
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~a~~ 222 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAAG---------ACPLVITDIDEGRLKFAKE 222 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHTT---------CCSEEEEESCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEECCCHHHHHHHHH
Confidence 4789999999988754 555666666543 2359999999999987765
No 333
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.08 E-value=0.19 Score=53.45 Aligned_cols=51 Identities=10% Similarity=-0.011 Sum_probs=37.7
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
+++++|++||-.+||+ |..++|+|..++ ..|++.|.+++|+..++ .+|...
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G----------a~Vi~~~~~~~~~~~~~----~lGa~~ 226 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG----------AETYVISRSSRKREDAM----KMGADH 226 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT----------CEEEEEESSSTTHHHHH----HHTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC----------CEEEEEcCCHHHHHHHH----HcCCCE
Confidence 4789999999999854 455666666543 36999999999987664 467543
No 334
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=91.00 E-value=0.37 Score=50.63 Aligned_cols=52 Identities=21% Similarity=0.251 Sum_probs=37.6
Q ss_pred cCCCCCCEEEeecCCCCh-HHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGS-KTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGs-KT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
..++||++||=.+||+++ .+++++..++ ...|++.|.+++|+.++ +.+|...
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~---------g~~Vi~~~~~~~r~~~~----~~~Ga~~ 211 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVF---------GAKVIAVDINQDKLNLA----KKIGADV 211 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTS---------CCEEEEEESCHHHHHHH----HHTTCSE
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhC---------CCEEEEEECcHHHhhhh----hhcCCeE
Confidence 368999999999887754 4555554432 46899999999998754 4577653
No 335
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.90 E-value=0.31 Score=52.41 Aligned_cols=52 Identities=15% Similarity=0.016 Sum_probs=36.8
Q ss_pred cC-CCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LD-VQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld-~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
++ +++|++||-.+||+ |..++|+|..++ ...|++.|.+.+|++.++ ++|...
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~~~----~lGa~~ 243 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLG---------AENVIVIAGSPNRLKLAE----EIGADL 243 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHTT---------BSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHcC---------CceEEEEcCCHHHHHHHH----HcCCcE
Confidence 36 88999999999543 344555555532 148999999999988764 577653
No 336
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=90.82 E-value=0.24 Score=55.76 Aligned_cols=99 Identities=11% Similarity=0.075 Sum_probs=56.6
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
..-+|||+|||.||.+.-+-.+ + --.|+|+|+++..+.+..+|.. ..+...+.+.|...+..-.....
T Consensus 87 ~~~~viDLFaG~GGlslG~~~a-G---------~~~v~avE~d~~A~~ty~~N~~--~~p~~~~~~~DI~~i~~~~~~~~ 154 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESI-G---------GQCVFTSEWNKHAVRTYKANHY--CDPATHHFNEDIRDITLSHQEGV 154 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTT-T---------EEEEEEECCCHHHHHHHHHHSC--CCTTTCEEESCTHHHHCTTCTTS
T ss_pred ccceEEEecCCccHHHHHHHHC-C---------CEEEEEEeCCHHHHHHHHHhcc--cCCCcceeccchhhhhhcccccc
Confidence 3568999999999988776432 1 2368999999999998887641 11333455566655321000000
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCcc
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 192 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtl 192 (732)
... ............+|.|+.-+||-+.-..
T Consensus 155 ~~~----~~~~~i~~~~~~~Dvl~gGpPCQ~FS~A 185 (482)
T 3me5_A 155 SDE----AAAEHIRQHIPEHDVLLAGFPCQPFSLA 185 (482)
T ss_dssp CHH----HHHHHHHHHSCCCSEEEEECCCCCC---
T ss_pred chh----hHHhhhhhcCCCCCEEEecCCCcchhhh
Confidence 000 0000000112468999999999886544
No 337
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.76 E-value=0.23 Score=52.45 Aligned_cols=51 Identities=10% Similarity=0.113 Sum_probs=37.6
Q ss_pred CCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 75 DVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 75 d~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
++ +|++||-.+||+ |..++|+|..+. |...|++.|.+.+|++.++ ++|...
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~--------~Ga~Vi~~~~~~~~~~~~~----~lGa~~ 219 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALM--------KNITIVGISRSKKHRDFAL----ELGADY 219 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHC--------TTCEEEEECSCHHHHHHHH----HHTCSE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhc--------CCCEEEEEeCCHHHHHHHH----HhCCCE
Confidence 77 999999999865 556777777651 0146999999999988764 467643
No 338
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=90.60 E-value=0.23 Score=51.70 Aligned_cols=50 Identities=12% Similarity=-0.039 Sum_probs=37.0
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
..+++|++||=.+||+ |..++|+|..++ ..|++.+ +.+|+..++ ++|...
T Consensus 138 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G----------a~Vi~~~-~~~~~~~~~----~lGa~~ 188 (315)
T 3goh_A 138 IPLTKQREVLIVGFGAVNNLLTQMLNNAG----------YVVDLVS-ASLSQALAA----KRGVRH 188 (315)
T ss_dssp SCCCSCCEEEEECCSHHHHHHHHHHHHHT----------CEEEEEC-SSCCHHHHH----HHTEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC----------CEEEEEE-ChhhHHHHH----HcCCCE
Confidence 4688999999998854 556677776653 4899999 888888764 477643
No 339
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.07 E-value=1 Score=52.13 Aligned_cols=140 Identities=15% Similarity=0.110 Sum_probs=81.9
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcC--CCCC-CCCCeEEEEEeC---CHHHHH-HHH----------HHHHHcCC--C
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQS--TNPG-ALPNGMVIANDL---DVQRCN-LLI----------HQTKRMCT--A 137 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~--~~~~-~~p~G~VvAnDi---d~~Rl~-~L~----------~n~kRlg~--~ 137 (732)
++.-+|||+|=|.|--.+...+..... .++. ....-.++++|. +..-+. .+. +.+..... +
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 144 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 144 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCS
T ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCC
Confidence 345699999999999877776664210 0000 011346899998 555443 111 11111211 1
Q ss_pred c------------eEEEeccccc-CCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhccc
Q 004759 138 N------------LIVTNHEAQH-FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNV 204 (732)
Q Consensus 138 n------------i~Vt~~Da~~-fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~ 204 (732)
. +.+..+|+.. ++.+. ......||.|++|+- .-.|||++|..
T Consensus 145 ~~~~~~~~~~~~~l~l~~gd~~~~l~~~~-----------------~~~~~~~d~~~~D~f-----~p~~np~~w~~--- 199 (676)
T 3ps9_A 145 GCHRLLLDAGRVTLDLWFGDINELTSQLD-----------------DSLNQKVDAWFLDGF-----APAKNPDMWTQ--- 199 (676)
T ss_dssp EEEEEEEGGGTEEEEEEESCHHHHGGGBC-----------------GGGTTCEEEEEECCS-----CGGGCGGGSCH---
T ss_pred CceEEEecCCcEEEEEecCCHHHHHHhcc-----------------cccCCcccEEEECCC-----CCcCChhhhhH---
Confidence 1 1223344432 11110 001256999999974 23689999864
Q ss_pred ccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHCCCcEE
Q 004759 205 GLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVE 259 (732)
Q Consensus 205 ~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~~~~ve 259 (732)
.++....+++++||++...||. ..|...|.+.+..++
T Consensus 200 -----------~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~L~~aGf~v~ 236 (676)
T 3ps9_A 200 -----------NLFNAMARLARPGGTLATFTSA-------GFVRRGLQDAGFTMQ 236 (676)
T ss_dssp -----------HHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHHTCEEE
T ss_pred -----------HHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhCCeEEE
Confidence 5778888999999987654444 477888888775544
No 340
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=89.70 E-value=0.76 Score=49.72 Aligned_cols=50 Identities=20% Similarity=0.272 Sum_probs=36.3
Q ss_pred CCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 75 DVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 75 d~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
++++|++||=.+||+ |..++|+|.+++ ...|++.|.+++|+++++ ++|..
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~~~----~lGa~ 260 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG---------ASKVILSEPSEVRRNLAK----ELGAD 260 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEECSCHHHHHHHH----HHTCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEECCCHHHHHHHH----HcCCC
Confidence 689999999988644 444556655532 248999999999998764 57754
No 341
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=88.39 E-value=0.73 Score=48.48 Aligned_cols=50 Identities=22% Similarity=0.228 Sum_probs=38.4
Q ss_pred cCCCCCCEEEeecCC--CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAA--PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAA--PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
+++++|++||-.+|| -|.-++|++..++ ..|++.|.+.+|+..++. +|..
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G----------a~Vi~~~~~~~~~~~~~~----lga~ 191 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQILN----------FRLIAVTRNNKHTEELLR----LGAA 191 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT----------CEEEEEESSSTTHHHHHH----HTCS
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHh----CCCc
Confidence 478999999999886 4666777776653 489999999999887653 6654
No 342
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=88.29 E-value=0.87 Score=47.91 Aligned_cols=49 Identities=16% Similarity=0.197 Sum_probs=35.8
Q ss_pred CCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 75 DVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 75 d~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
++++|++||-.+||+ |..++|+|..+ ...|++.|.+.+|+..++ .+|..
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~----------Ga~Vi~~~~~~~~~~~~~----~lGa~ 210 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM----------GLNVVAVDIGDEKLELAK----ELGAD 210 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT----------TCEEEEECSCHHHHHHHH----HTTCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc----------CCEEEEEeCCHHHHHHHH----HCCCC
Confidence 689999999999853 44455555543 248999999999988664 46764
No 343
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=87.52 E-value=1.5 Score=46.46 Aligned_cols=52 Identities=12% Similarity=0.078 Sum_probs=33.6
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
..+++|++||=.+ |.|+....+++++... ...|++.|.+.+|+..++ .+|..
T Consensus 163 ~~~~~g~~VlV~G-g~g~iG~~~~~~a~~~-------Ga~Vi~~~~~~~~~~~~~----~lGa~ 214 (353)
T 4dup_A 163 AGLTEGESVLIHG-GTSGIGTTAIQLARAF-------GAEVYATAGSTGKCEACE----RLGAK 214 (353)
T ss_dssp TCCCTTCEEEESS-TTSHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEEc-CCCHHHHHHHHHHHHc-------CCEEEEEeCCHHHHHHHH----hcCCC
Confidence 4688999999663 3444433333333321 247999999999988764 46754
No 344
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=86.88 E-value=1.2 Score=46.86 Aligned_cols=50 Identities=22% Similarity=0.226 Sum_probs=36.3
Q ss_pred cCCCCCCEEEeecC--CCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCA--APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCA--APGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||-.+| +-|.-+++++... ...|++.|.+.+|+..+. .+|..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~----------G~~Vi~~~~~~~~~~~~~----~~ga~ 213 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF----------GARVIATAGSEDKLRRAK----ALGAD 213 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT----------TCEEEEEESSHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC----------CCEEEEEeCCHHHHHHHH----hcCCC
Confidence 36889999999988 3445556665543 248999999999988764 35654
No 345
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=86.65 E-value=1.3 Score=53.96 Aligned_cols=92 Identities=9% Similarity=0.028 Sum_probs=56.6
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCC----cc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC----RA 154 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~----~~ 154 (732)
.-++||+|||-||.+.-+-.+ +- .-.|.|+|+++..+++..+|. ++..+.+.|...+... .+
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~--------~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~~di 605 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GI--------SDTLWAIEMWDPAAQAFRLNN-----PGSTVFTEDCNILLKLVMAGET 605 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TS--------EEEEEEECSSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHHHTCS
T ss_pred CCeEEEeccCccHHHHHHHHC-CC--------CceEEEEECCHHHHHHHHHhC-----CCCccccccHHHHhhhccchhh
Confidence 458999999999998877554 10 125889999999999887763 3445555554332100 00
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccc
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 193 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlr 193 (732)
.... .........+|.|+.-+||-+.-...
T Consensus 606 ~~~~---------~~~lp~~~~vDll~GGpPCQ~FS~ag 635 (1002)
T 3swr_A 606 TNSR---------GQRLPQKGDVEMLCGGPPCQGFSGMN 635 (1002)
T ss_dssp BCTT---------CCBCCCTTTCSEEEECCCCTTCCSSS
T ss_pred hhhh---------hhhcccCCCeeEEEEcCCCcchhhhC
Confidence 0000 00001124699999999998865443
No 346
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=86.14 E-value=0.9 Score=47.93 Aligned_cols=46 Identities=15% Similarity=0.055 Sum_probs=31.1
Q ss_pred CCCEEEeecC-C-CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 78 PDHFVLDMCA-A-PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 78 pg~~VLDmCA-A-PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
+|++||=.++ | -|.-++|+|.++ ...|++.|.+.+|+..+++ +|..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~----------Ga~Vi~~~~~~~~~~~~~~----lGa~ 197 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY----------GLRVITTASRNETIEWTKK----MGAD 197 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT----------TCEEEEECCSHHHHHHHHH----HTCS
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc----------CCEEEEEeCCHHHHHHHHh----cCCc
Confidence 8999997632 2 244455555543 2489999999999887654 6754
No 347
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=86.06 E-value=0.81 Score=48.57 Aligned_cols=51 Identities=6% Similarity=0.013 Sum_probs=35.1
Q ss_pred CCC-CCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 75 DVQ-PDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 75 d~~-pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
+++ +|++||=.+||+ |..++|+|..++ ..|++.|.+.+|+..+.+ ++|...
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G----------a~Vi~~~~~~~~~~~~~~---~lGa~~ 228 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMG----------HHVTVISSSNKKREEALQ---DLGADD 228 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHT----------CEEEEEESSTTHHHHHHT---TSCCSC
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCC----------CeEEEEeCChHHHHHHHH---HcCCce
Confidence 677 999999997543 334555555542 479999999988876542 577654
No 348
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=86.01 E-value=0.98 Score=43.33 Aligned_cols=46 Identities=15% Similarity=0.137 Sum_probs=30.5
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHH
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLL 127 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L 127 (732)
+++++|++||-.+|+ |+....+++++... ...|++.|.+.++...+
T Consensus 34 ~~~~~g~~vlV~Ga~-ggiG~~~~~~~~~~-------G~~V~~~~~~~~~~~~~ 79 (198)
T 1pqw_A 34 GRLSPGERVLIHSAT-GGVGMAAVSIAKMI-------GARIYTTAGSDAKREML 79 (198)
T ss_dssp SCCCTTCEEEETTTT-SHHHHHHHHHHHHH-------TCEEEEEESSHHHHHHH
T ss_pred hCCCCCCEEEEeeCC-ChHHHHHHHHHHHc-------CCEEEEEeCCHHHHHHH
Confidence 467899999988854 33333333333321 25799999999887655
No 349
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=85.97 E-value=0.84 Score=48.13 Aligned_cols=50 Identities=18% Similarity=0.079 Sum_probs=34.6
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
+++ +|++||-.+||+ |..++|+|..++ .+.|++.|.+.+|+..++ ++|..
T Consensus 164 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~G---------a~~Vi~~~~~~~~~~~~~----~~Ga~ 214 (348)
T 2d8a_A 164 GPI-SGKSVLITGAGPLGLLGIAVAKASG---------AYPVIVSEPSDFRRELAK----KVGAD 214 (348)
T ss_dssp SCC-TTCCEEEECCSHHHHHHHHHHHHTT---------CCSEEEECSCHHHHHHHH----HHTCS
T ss_pred cCC-CCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEECCCHHHHHHHH----HhCCC
Confidence 467 999999999843 344555555432 237999999999988664 46754
No 350
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=85.66 E-value=0.39 Score=49.97 Aligned_cols=60 Identities=15% Similarity=0.075 Sum_probs=34.0
Q ss_pred ccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 175 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 175 ~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
..||.|++|||.-........++.+.. .............++..+.++||+||.|+....
T Consensus 39 ~s~DlIvtdPPY~~~~~y~~~~~~~~~--~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 39 ASVHLVVTSPPYWTLKRYEDTPGQLGH--IEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp TCEEEEEECCCCCCCC-------CCHH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CceeEEEECCCCCCccccCCChhhhcc--cccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 679999999998643322222111100 000011122345788999999999999987644
No 351
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=85.53 E-value=0.95 Score=47.38 Aligned_cols=50 Identities=24% Similarity=0.234 Sum_probs=34.2
Q ss_pred cCCCCCCEEEeecCC--CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAA--PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAA--PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
..+++|++||=.+|+ -|.-++|++..+ ...|++.|.+.+|+..+ +++|..
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~----------Ga~Vi~~~~~~~~~~~~----~~~ga~ 195 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK----------GAHTIAVASTDEKLKIA----KEYGAE 195 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT----------TCEEEEEESSHHHHHHH----HHTTCS
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC----------CCEEEEEeCCHHHHHHH----HHcCCc
Confidence 368999999988743 233344554442 34899999999998865 346754
No 352
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=85.50 E-value=1.1 Score=46.84 Aligned_cols=50 Identities=18% Similarity=0.169 Sum_probs=35.1
Q ss_pred cCCCCCCEEEeecCC--CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAA--PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAA--PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||=.+|+ -|.-++|++..++ ..|++.+.+++|++.++ .+|..
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G----------a~Vi~~~~~~~~~~~~~----~~Ga~ 187 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKALG----------AKLIGTVSSPEKAAHAK----ALGAW 187 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT----------CEEEEEESSHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHCC----------CEEEEEeCCHHHHHHHH----HcCCC
Confidence 468999999977643 2444555555542 48999999999988764 46654
No 353
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=85.20 E-value=0.97 Score=47.67 Aligned_cols=50 Identities=18% Similarity=0.139 Sum_probs=34.9
Q ss_pred cCCCCCCEEEeecCC--CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAA--PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAA--PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
..+++|++||=.+|+ -|.-++|++..+ ...|++.+.+.+|+..++ .+|..
T Consensus 155 ~~~~~g~~VlV~Gasg~iG~~~~~~a~~~----------Ga~Vi~~~~~~~~~~~~~----~~ga~ 206 (342)
T 4eye_A 155 GQLRAGETVLVLGAAGGIGTAAIQIAKGM----------GAKVIAVVNRTAATEFVK----SVGAD 206 (342)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHT----------TCEEEEEESSGGGHHHHH----HHTCS
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc----------CCEEEEEeCCHHHHHHHH----hcCCc
Confidence 467899999977762 244455555543 248999999999987665 36654
No 354
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=85.13 E-value=1.8 Score=51.05 Aligned_cols=49 Identities=20% Similarity=0.104 Sum_probs=36.0
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHH
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQ 130 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n 130 (732)
...+|||++||.||.+.-+-++.+... ..=-.|+|+|+|+..+.+.++|
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~----~~f~vv~AvE~d~~A~~Ty~~N 259 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSG----LKLETRWAVDFNSFACQSLKYN 259 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHT----EEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccC----CceeEEEEEeCCHHHHHHHHHH
Confidence 346899999999999988866532100 0002689999999999998876
No 355
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=84.89 E-value=0.95 Score=47.97 Aligned_cols=49 Identities=16% Similarity=0.071 Sum_probs=36.1
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCH---HHHHHHHHHHHHcC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDV---QRCNLLIHQTKRMC 135 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~---~Rl~~L~~n~kRlg 135 (732)
-.+|+.|||-+||+|+... .|..++ -..+++|+++ .-+..++.++++.+
T Consensus 240 ~~~~~~vlDpF~GsGtt~~-aa~~~~----------r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTAR-VAIQEG----------RNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHH-HHHHHT----------CEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHH-HHHHcC----------CcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 4789999999999998544 444443 4789999999 88888888776654
No 356
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=83.87 E-value=1 Score=48.66 Aligned_cols=138 Identities=12% Similarity=0.084 Sum_probs=73.2
Q ss_pred CCEEEeecCCCChHHHHHHHH----HhcCC--CCC-CCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEecccccC-
Q 004759 79 DHFVLDMCAAPGSKTFQLLEI----IHQST--NPG-ALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHF- 149 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~----l~~~~--~~~-~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~f- 149 (732)
..+|+|++|+.|.-|+.++.. +.... ... ..|.-.|+.||.-..-...|-..+..+.. .+-.++.+.+..|
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 468999999999998875443 32110 000 24678999999987777777655432110 0112333333222
Q ss_pred CCCccCCCCCCCCccccccccccccccccEEEe--------cCCCCCCCccccChhhhhhc-cccccc-----chHHHHH
Q 004759 150 PGCRANKNFSSASDKGIESESNMGQLLFDRVLC--------DVPCSGDGTLRKAPDIWRKW-NVGLGN-----GLHSLQV 215 (732)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~--------DvPCSGdGtlrk~pd~w~~w-s~~~~~-----~L~~lQ~ 215 (732)
.. .+....||.|.. ++|+.-.. .|. .+|-.. ++.... .....-.
T Consensus 132 ~r-------------------lfp~~S~d~v~Ss~aLHWls~~p~~l~~--nkg-~i~~~~~~p~~v~~ay~~Qf~~D~~ 189 (359)
T 1m6e_X 132 GR-------------------LFPRNTLHFIHSSYSLMWLSQVPIGIES--NKG-NIYMANTCPQSVLNAYYKQFQEDHA 189 (359)
T ss_dssp SC-------------------CSCTTCBSCEEEESCTTBCSSCCSCCCC--CTT-TTSSCSSSCCTTSCCSHHHHHHHHH
T ss_pred hc-------------------cCCCCceEEEEehhhhhhcccCchhhhc--cCC-ceEecCCCCHHHHHHHHHHHHHHHH
Confidence 11 123367888754 44433211 000 011111 111121 1222334
Q ss_pred HHHHHHHhhccCCCEEEEEcCCC
Q 004759 216 QIAMRGISLLKVGGRIVYSTCSM 238 (732)
Q Consensus 216 ~IL~rAl~lLKpGGrLVYSTCSl 238 (732)
.+|+.-.+-|+|||++|.++...
T Consensus 190 ~FL~~Ra~EL~pGG~mvl~~~gr 212 (359)
T 1m6e_X 190 LFLRCRAQEVVPGGRMVLTILGR 212 (359)
T ss_dssp HHHHHHHHHBCTTCEEEEEEEEC
T ss_pred HHHHHHHHHhcCCceEEEEEecC
Confidence 56888888999999999987654
No 357
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=83.75 E-value=1.3 Score=46.70 Aligned_cols=51 Identities=16% Similarity=0.236 Sum_probs=35.8
Q ss_pred cCCCCCCEEEeecCC--CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAA--PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAA--PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||-.+|| -|.-+++++..+. ...|++.|.+++|+..++ .+|..
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~---------Ga~Vi~~~~~~~~~~~~~----~~g~~ 218 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVS---------GATIIGVDVREEAVEAAK----RAGAD 218 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHT---------CCEEEEEESSHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcC---------CCeEEEEcCCHHHHHHHH----HhCCC
Confidence 368899999999986 3344555555531 147999999999987663 35654
No 358
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=83.52 E-value=3.6 Score=41.47 Aligned_cols=137 Identities=12% Similarity=0.041 Sum_probs=78.1
Q ss_pred CCEEEeecCCCC-hHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPG-SKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPG-sKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
|..+|=-+|+.+ |....+|..|... ...|+.+|.+.+.+..+...+..++...+.+...|..+...+.
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~-------Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~---- 74 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQL-------GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVI---- 74 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHT-------TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHH----
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHH----
Confidence 677777777653 5677777777652 4689999999999998888888887666777777765421110
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCcccc-Chhh-hhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRK-APDI-WRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk-~pd~-w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
.............|.++.++-..+...+.. ..+. |..|....-..+ .....+.+.++.+++.||+||..
T Consensus 75 -------~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~-~~~~~~~~~~~~~~~~~G~IVni 145 (256)
T 4fs3_A 75 -------NGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISS-YSLTIVAHEAKKLMPEGGSIVAT 145 (256)
T ss_dssp -------HHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHT-HHHHHHHHHHHTTCTTCEEEEEE
T ss_pred -------HHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHH-HHHHHHHHHHHHHhccCCEEEEE
Confidence 000001122357888887664333222211 1111 222321111111 11233455667788899999864
No 359
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=83.48 E-value=3.1 Score=43.96 Aligned_cols=52 Identities=10% Similarity=0.160 Sum_probs=34.8
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||-.+| .|+....+++++... ...|++.|.+.+|+..+ +.+|..
T Consensus 158 ~~~~~g~~vlV~Ga-~ggiG~~~~~~a~~~-------Ga~Vi~~~~~~~~~~~~----~~~g~~ 209 (354)
T 2j8z_A 158 GNVQAGDYVLIHAG-LSGVGTAAIQLTRMA-------GAIPLVTAGSQKKLQMA----EKLGAA 209 (354)
T ss_dssp SCCCTTCEEEESST-TSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHH----HHHTCS
T ss_pred cCCCCCCEEEEECC-ccHHHHHHHHHHHHc-------CCEEEEEeCCHHHHHHH----HHcCCc
Confidence 46889999998764 344444444444331 35899999999998876 345654
No 360
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=83.26 E-value=1.5 Score=45.76 Aligned_cols=51 Identities=18% Similarity=0.161 Sum_probs=34.5
Q ss_pred cCCCCCCEEEeecCCC--ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAAP--GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP--GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||-.+|+. |.-++|++... ...|++.|.+.+|+..+. +.+|..
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~----------Ga~Vi~~~~~~~~~~~~~---~~~g~~ 197 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLK----------GCRVVGIAGGAEKCRFLV---EELGFD 197 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT----------TCEEEEEESSHHHHHHHH---HTTCCS
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHC----------CCEEEEEeCCHHHHHHHH---HHcCCC
Confidence 4689999999877632 33444444432 248999999999988663 345653
No 361
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=83.24 E-value=4.4 Score=41.66 Aligned_cols=146 Identities=12% Similarity=0.027 Sum_probs=79.1
Q ss_pred ccccccchhhhcCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEE
Q 004759 63 QEAVSMVPPLFLDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIV 141 (732)
Q Consensus 63 Qd~~Smlp~llLd~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~V 141 (732)
|-+.||-+...| .|.+||=.+|+. ++....++..|... ...|+.+|.+.+....+.......+. +.+
T Consensus 17 ~gp~sm~~~~~l---~~k~vlVTGasg~~GIG~~ia~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~ 84 (296)
T 3k31_A 17 QGPGSMRTGMLM---EGKKGVIIGVANDKSLAWGIAKAVCAQ-------GAEVALTYLSETFKKRVDPLAESLGV--KLT 84 (296)
T ss_dssp ----CCCCCCTT---TTCEEEEECCCSTTSHHHHHHHHHHHT-------TCEEEEEESSGGGHHHHHHHHHHHTC--CEE
T ss_pred cCCccccchhcc---CCCEEEEEeCCCCCCHHHHHHHHHHHC-------CCEEEEEeCChHHHHHHHHHHHhcCC--eEE
Confidence 556777665444 367888777764 47777888877652 45799999998777766666666553 455
Q ss_pred EecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCC----Ccc-ccChhhhhhcccccccchHHHHHH
Q 004759 142 TNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD----GTL-RKAPDIWRKWNVGLGNGLHSLQVQ 216 (732)
Q Consensus 142 t~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGd----Gtl-rk~pd~w~~ws~~~~~~L~~lQ~~ 216 (732)
...|..+...+.- ...........+|.++..+-.... +.+ ...++.|.+- -..++ .-...
T Consensus 85 ~~~Dv~d~~~v~~-----------~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~---~~vN~-~g~~~ 149 (296)
T 3k31_A 85 VPCDVSDAESVDN-----------MFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTS---MHISC-YSFTY 149 (296)
T ss_dssp EECCTTCHHHHHH-----------HHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHH---HHHHT-HHHHH
T ss_pred EEcCCCCHHHHHH-----------HHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHH---HHHHH-HHHHH
Confidence 5666554211100 000001112468998885533221 111 1222333221 11111 22345
Q ss_pred HHHHHHhhccCCCEEEEEc
Q 004759 217 IAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 217 IL~rAl~lLKpGGrLVYST 235 (732)
+++.++..++.+|+||+.+
T Consensus 150 l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 150 IASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHHHhhcCCEEEEEE
Confidence 6777888888899999864
No 362
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=83.08 E-value=2 Score=45.71 Aligned_cols=50 Identities=18% Similarity=0.113 Sum_probs=35.7
Q ss_pred cCCCCCCEEEeecC--CCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCA--APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCA--APGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||=.+| +-|..++|+|..+ ...|++.+.+.+|+..++ ++|..
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~----------Ga~Vi~~~~~~~~~~~~~----~~Ga~ 210 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKA----------KCHVIGTCSSDEKSAFLK----SLGCD 210 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHT----------TCEEEEEESSHHHHHHHH----HTTCS
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhC----------CCEEEEEECCHHHHHHHH----HcCCc
Confidence 36899999999884 3344566666553 247999999999987664 46754
No 363
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=82.89 E-value=1.3 Score=46.20 Aligned_cols=51 Identities=20% Similarity=0.113 Sum_probs=34.9
Q ss_pred cCCCCCC-EEEeecCC--CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDH-FVLDMCAA--PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~-~VLDmCAA--PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
.++++|+ +||=.+|+ -|..++|+|..++ ..|++.+.+.+|+..++ .+|...
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G----------a~vi~~~~~~~~~~~~~----~lGa~~ 197 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRG----------YTVEASTGKAAEHDYLR----VLGAKE 197 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTT----------CCEEEEESCTTCHHHHH----HTTCSE
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHCC----------CEEEEEECCHHHHHHHH----HcCCcE
Confidence 3678886 89988762 3444566665532 46999999998887764 477653
No 364
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=82.72 E-value=5.4 Score=39.85 Aligned_cols=135 Identities=10% Similarity=0.037 Sum_probs=74.7
Q ss_pred CCEEEeecCCCC-hHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPG-SKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPG-sKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
|.+||=.+|+.| |....++..|... ...|+..+.+.+....+.+.....+..++.+...|..+...+.-
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~--- 76 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEA-------GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIET--- 76 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT-------TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHH---
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHC-------CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHH---
Confidence 556776666532 4677777777652 35789999988777777766666665567777777665322110
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCC----Ccc-ccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGD----GTL-RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGd----Gtl-rk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
...........+|.++..+-.... +.+ ...++.|..- -..+ ..-...+++.++.+++.+|+||
T Consensus 77 --------~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~---~~~n-~~~~~~l~~~~~~~~~~~g~iv 144 (266)
T 3oig_A 77 --------CFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLA---HNIS-SYSLTAVVKAARPMMTEGGSIV 144 (266)
T ss_dssp --------HHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHH---HHHH-THHHHHHHHHHGGGCTTCEEEE
T ss_pred --------HHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHH---HHHh-HHHHHHHHHHHHhhcCCCceEE
Confidence 000001112468988886543331 111 1122222210 0000 1123456777888888899999
Q ss_pred EEc
Q 004759 233 YST 235 (732)
Q Consensus 233 YST 235 (732)
+.+
T Consensus 145 ~is 147 (266)
T 3oig_A 145 TLT 147 (266)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 365
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=82.68 E-value=1.4 Score=46.20 Aligned_cols=53 Identities=11% Similarity=0.077 Sum_probs=34.4
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||-.+|+ |+....+++++... ...|++.|.+.+|+..+.+ ++|..
T Consensus 151 ~~~~~g~~vlI~Ga~-g~iG~~~~~~a~~~-------G~~V~~~~~~~~~~~~~~~---~~g~~ 203 (345)
T 2j3h_A 151 CSPKEGETVYVSAAS-GAVGQLVGQLAKMM-------GCYVVGSAGSKEKVDLLKT---KFGFD 203 (345)
T ss_dssp SCCCTTCEEEESSTT-SHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHHHH---TSCCS
T ss_pred hCCCCCCEEEEECCC-cHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHH---HcCCc
Confidence 468899999998862 33333333333321 2489999999999876642 35653
No 366
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=82.66 E-value=0.86 Score=48.15 Aligned_cols=50 Identities=12% Similarity=0.085 Sum_probs=39.1
Q ss_pred CCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC
Q 004759 76 VQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT 136 (732)
Q Consensus 76 ~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~ 136 (732)
-.+|+.|||-+||+|+. ++.|..++ ...+++|+++..+..++.++++.+.
T Consensus 250 ~~~~~~VlDpF~GsGtt-~~aa~~~g----------r~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTT-GLVAERES----------RKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp CCTTCEEEETTCTTCHH-HHHHHHTT----------CEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred CCCCCEEEECCCCCCHH-HHHHHHcC----------CCEEEEeCCHHHHHHHHHHHHhccc
Confidence 47899999999999984 44445442 5789999999999988887765543
No 367
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=82.51 E-value=2.1 Score=44.58 Aligned_cols=52 Identities=19% Similarity=0.111 Sum_probs=34.6
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||-.+|+ |+....+++++... ...|++.|.+.+++..+ +.+|..
T Consensus 141 ~~~~~g~~vlV~Ga~-ggiG~~~~~~~~~~-------G~~V~~~~~~~~~~~~~----~~~g~~ 192 (333)
T 1v3u_A 141 CGVKGGETVLVSAAA-GAVGSVVGQIAKLK-------GCKVVGAAGSDEKIAYL----KQIGFD 192 (333)
T ss_dssp SCCCSSCEEEEESTT-BHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHH----HHTTCS
T ss_pred hCCCCCCEEEEecCC-CcHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHH----HhcCCc
Confidence 368899999998873 34444444444321 34899999999988766 345653
No 368
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=81.79 E-value=1.3 Score=46.89 Aligned_cols=55 Identities=13% Similarity=-0.016 Sum_probs=36.0
Q ss_pred ccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCC
Q 004759 175 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 237 (732)
Q Consensus 175 ~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS 237 (732)
..||.|++|||......- .|..............+|..+.++||+||.|+.....
T Consensus 32 ~svDlI~tDPPY~~~~~~--------~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 32 ESISLVMTSPPFALQRKK--------EYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SCEEEEEECCCCSSSCSC--------SSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCeeEEEECCCCCCCccc--------ccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 679999999998543210 1111111223344567888899999999999886543
No 369
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=81.38 E-value=0.75 Score=48.42 Aligned_cols=46 Identities=20% Similarity=0.144 Sum_probs=32.4
Q ss_pred hcCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHH
Q 004759 73 FLDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLI 128 (732)
Q Consensus 73 lLd~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~ 128 (732)
.+++ +|++||-.+||+ |..++|+|..++ .+.|++.|.+.+|+..++
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~G---------a~~Vi~~~~~~~~~~~~~ 206 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASG---------AGPILVSDPNPYRLAFAR 206 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTT---------CCSEEEECSCHHHHGGGT
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEECCCHHHHHHHH
Confidence 3467 999999999843 444555555432 237999999999987654
No 370
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=81.19 E-value=2 Score=45.74 Aligned_cols=51 Identities=6% Similarity=0.029 Sum_probs=33.7
Q ss_pred CCC-CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 75 DVQ-PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 75 d~~-pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++ +|++||=.+| |+....+++++... ...|++.+.+..|+..+.+ ++|..
T Consensus 183 ~~~~~g~~VlV~Ga--G~vG~~~~q~a~~~-------Ga~Vi~~~~~~~~~~~~~~---~lGa~ 234 (366)
T 1yqd_A 183 GLDEPGKHIGIVGL--GGLGHVAVKFAKAF-------GSKVTVISTSPSKKEEALK---NFGAD 234 (366)
T ss_dssp TCCCTTCEEEEECC--SHHHHHHHHHHHHT-------TCEEEEEESCGGGHHHHHH---TSCCS
T ss_pred CcCCCCCEEEEECC--CHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHH---hcCCc
Confidence 577 9999999875 55444444433321 2489999999998876542 56754
No 371
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=81.09 E-value=2.6 Score=52.82 Aligned_cols=96 Identities=9% Similarity=0.032 Sum_probs=55.9
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
...+|||+|||.||.+.-+-.+ + -.-.|.|+|+++..+.+..+|. ++..+.+.|...+....+...
T Consensus 850 ~~l~viDLFsG~GGlslGfe~A-G--------~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~gd 915 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQA-G--------ISETLWAIEMWDPAAQAFRLNN-----PGTTVFTEDCNVLLKLVMAGE 915 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHT-T--------SEEEEEEECCSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHTTTC
T ss_pred CCceEEecccCccHHHHHHHHC-C--------CCceEEEEECCHHHHHHHHHhC-----CCCcEeeccHHHHhHhhhccc
Confidence 3468999999999998876432 1 0125889999999999988763 334455555432210000000
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCcc
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 192 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtl 192 (732)
... ...........+|.|+.-+||-+.-..
T Consensus 916 i~~-----~~~~~lp~~~~vDvl~GGpPCQ~FS~a 945 (1330)
T 3av4_A 916 VTN-----SLGQRLPQKGDVEMLCGGPPCQGFSGM 945 (1330)
T ss_dssp SBC-----SSCCBCCCTTTCSEEEECCCCTTTCSS
T ss_pred hhh-----hhhhhccccCccceEEecCCCcccccc
Confidence 000 000000112468999999999886543
No 372
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=80.68 E-value=2.7 Score=46.21 Aligned_cols=51 Identities=18% Similarity=0.012 Sum_probs=35.5
Q ss_pred cCCCCCCEEEeecC-C-CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMCA-A-PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmCA-A-PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
.++++|++||=.+| | -|..++|+|..+ ...|++.+.+.+|++.++ .+|...
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~----------Ga~vi~~~~~~~~~~~~~----~lGa~~ 276 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG----------GANPICVVSSPQKAEICR----AMGAEA 276 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT----------TCEEEEEESSHHHHHHHH----HHTCCE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc----------CCeEEEEECCHHHHHHHH----hhCCcE
Confidence 47899999997776 2 244455555543 257899999999988764 477643
No 373
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=80.50 E-value=2.5 Score=43.86 Aligned_cols=50 Identities=20% Similarity=0.145 Sum_probs=32.2
Q ss_pred CCCCCC-EEEeecC--CCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 75 DVQPDH-FVLDMCA--APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 75 d~~pg~-~VLDmCA--APGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
++++++ .||=.+| +-|..++|+|.+++ ..|++.+.+.+|++.++ ++|...
T Consensus 142 ~~~~~~g~VlV~Ga~G~vG~~aiqla~~~G----------a~Vi~~~~~~~~~~~~~----~lGa~~ 194 (324)
T 3nx4_A 142 GIRPQDGEVVVTGASGGVGSTAVALLHKLG----------YQVAAVSGRESTHGYLK----SLGANR 194 (324)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTT----------CCEEEEESCGGGHHHHH----HHTCSE
T ss_pred ccCCCCCeEEEECCCcHHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHH----hcCCCE
Confidence 456632 3776654 23455666666532 47999999999988774 477654
No 374
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=80.25 E-value=2.6 Score=44.59 Aligned_cols=52 Identities=4% Similarity=-0.061 Sum_probs=34.2
Q ss_pred cCCCCC------CEEEeecCCCChHHHHH-HHHH-hcCCCCCCCCCeEEEEEeCCHH---HHHHHHHHHHHcCCC
Q 004759 74 LDVQPD------HFVLDMCAAPGSKTFQL-LEII-HQSTNPGALPNGMVIANDLDVQ---RCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg------~~VLDmCAAPGsKT~qL-ae~l-~~~~~~~~~p~G~VvAnDid~~---Rl~~L~~n~kRlg~~ 137 (732)
+++++| ++||=.+| |+....+ ++++ ... +...|++.|.+.+ |++.++ ++|..
T Consensus 162 ~~~~~g~~~~~~~~VlV~Ga--G~vG~~a~iqla~k~~------Ga~~Vi~~~~~~~~~~~~~~~~----~lGa~ 224 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGN--GSLGLLTLAMLKVDDK------GYENLYCLGRRDRPDPTIDIIE----ELDAT 224 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECC--SHHHHHHHHHHHHCTT------CCCEEEEEECCCSSCHHHHHHH----HTTCE
T ss_pred cCCCCCcccCCCCEEEEECC--CHHHHHHHHHHHHHHc------CCcEEEEEeCCcccHHHHHHHH----HcCCc
Confidence 357899 99999997 5554444 4443 221 1234999999988 887653 57754
No 375
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=80.23 E-value=1.9 Score=44.91 Aligned_cols=48 Identities=17% Similarity=0.181 Sum_probs=32.3
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHH
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIH 129 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~ 129 (732)
+++++|++||-.+|+ |+....+++++... ...|++.|.+.+++..+.+
T Consensus 136 ~~~~~g~~vlV~Ga~-ggiG~~~~~~a~~~-------G~~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 136 YEIKPDEQFLFHAAA-GGVGLIACQWAKAL-------GAKLIGTVGTAQKAQSALK 183 (327)
T ss_dssp SCCCTTCEEEESSTT-BHHHHHHHHHHHHH-------TCEEEEEESSHHHHHHHHH
T ss_pred hCCCCCCEEEEECCC-CHHHHHHHHHHHHc-------CCEEEEEeCCHHHHHHHHH
Confidence 468899999988753 44444444433321 2489999999999877653
No 376
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=80.14 E-value=3.6 Score=42.84 Aligned_cols=46 Identities=20% Similarity=0.204 Sum_probs=31.7
Q ss_pred cCCCCCCEEEeecCC--CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHH
Q 004759 74 LDVQPDHFVLDMCAA--PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIH 129 (732)
Q Consensus 74 Ld~~pg~~VLDmCAA--PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~ 129 (732)
.++++|++||=.+|+ -|.-+++++... ...|++.|.+.+|+..+.+
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~----------G~~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHL----------GATVIGTVSTEEKAETARK 188 (333)
T ss_dssp SCCCTTCEEEETTTTSTTHHHHHHHHHHT----------TCEEEEEESSHHHHHHHHH
T ss_pred hCCCCCCEEEEECCccHHHHHHHHHHHHC----------CCEEEEEeCCHHHHHHHHH
Confidence 468899999987752 233344444432 2589999999999887643
No 377
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=79.64 E-value=1.3 Score=46.76 Aligned_cols=49 Identities=20% Similarity=0.150 Sum_probs=33.6
Q ss_pred CCCCCCEEEeecCC--CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 75 DVQPDHFVLDMCAA--PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 75 d~~pg~~VLDmCAA--PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
++++|++||-.+|+ -|.-+++++... ...|++.|.+.+++..+. .+|..
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~----------Ga~V~~~~~~~~~~~~~~----~~g~~ 216 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM----------GYRVLGIDGGEGKEELFR----SIGGE 216 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT----------TCEEEEEECSTTHHHHHH----HTTCC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC----------CCcEEEEcCCHHHHHHHH----HcCCc
Confidence 68899999999973 334444444432 248999999988886553 46653
No 378
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=79.38 E-value=1.8 Score=47.48 Aligned_cols=45 Identities=16% Similarity=0.007 Sum_probs=34.3
Q ss_pred CEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeE----EEEEeCCHHHHHHHHHHHH
Q 004759 80 HFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGM----VIANDLDVQRCNLLIHQTK 132 (732)
Q Consensus 80 ~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~----VvAnDid~~Rl~~L~~n~k 132 (732)
-+|||+|||-||.+.-+-++-.. -.. |.|+|+|+..+....+|..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~--------~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARS--------KNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHH--------HTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ceEEEEecCcCHHHHHHHHhCCc--------cccceeeEEEEecCHHHHHHHHHHcC
Confidence 48999999999988777554210 123 8999999999998888753
No 379
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=78.77 E-value=12 Score=37.84 Aligned_cols=62 Identities=6% Similarity=0.034 Sum_probs=46.2
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
|.+|| +.-|.|+....++..+... ...|++.+.+..++..+...+...+..++.+...|..+
T Consensus 28 ~k~vl-ITGasggIG~~la~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 89 (286)
T 1xu9_A 28 GKKVI-VTGASKGIGREMAYHLAKM-------GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED 89 (286)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 56777 5556788888888887652 35899999999999888877776665567777777654
No 380
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=78.46 E-value=8.3 Score=37.99 Aligned_cols=134 Identities=12% Similarity=0.046 Sum_probs=74.7
Q ss_pred CCEEEeecCCCChHHHHHHHHHhc-CCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQ-STNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~-~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
+.+|| +.-|.|+...+++..|.. . ...|++.+.+..++..+...+...+ .++.+...|..+...+.-
T Consensus 4 ~k~vl-ITGasggIG~~~a~~L~~~~-------g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~--- 71 (276)
T 1wma_A 4 IHVAL-VTGGNKGIGLAIVRDLCRLF-------SGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRA--- 71 (276)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHHS-------SSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHH---
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHhc-------CCeEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHH---
Confidence 45566 566778899999888865 3 3589999999998888777776654 345666666554211100
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccccC-hhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKA-PDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~-pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
...........+|.|+..+-....+..... ++-|... ...+ ..-...+++.++..++.+|+|||.+.
T Consensus 72 --------~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~---~~~N-~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 72 --------LRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVT---MKTN-FFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp --------HHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHH---HHHH-THHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred --------HHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhh---hhee-eeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 000000112368999875533222211111 1222211 0011 11234577778888887899998743
No 381
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=78.37 E-value=11 Score=40.83 Aligned_cols=50 Identities=16% Similarity=0.154 Sum_probs=34.7
Q ss_pred cCCCCCCEEEeecCCCChH---HHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMCAAPGSK---TFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsK---T~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
.++++|++||=.+| .|+. ++|++..+ ...|++.+.+.+|++.+ +++|...
T Consensus 216 ~~~~~g~~VlV~Ga-sG~iG~~a~qla~~~----------Ga~vi~~~~~~~~~~~~----~~lGa~~ 268 (447)
T 4a0s_A 216 AQMKQGDIVLIWGA-SGGLGSYAIQFVKNG----------GGIPVAVVSSAQKEAAV----RALGCDL 268 (447)
T ss_dssp TCCCTTCEEEETTT-TSHHHHHHHHHHHHT----------TCEEEEEESSHHHHHHH----HHTTCCC
T ss_pred cCCCCCCEEEEECC-CCHHHHHHHHHHHHc----------CCEEEEEeCCHHHHHHH----HhcCCCE
Confidence 57899999997765 3444 44444442 35789999999998876 3577654
No 382
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=77.70 E-value=1.8 Score=45.16 Aligned_cols=50 Identities=18% Similarity=0.202 Sum_probs=34.6
Q ss_pred CCCCCC-EEEeecCC--CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 75 DVQPDH-FVLDMCAA--PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 75 d~~pg~-~VLDmCAA--PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
++++|+ +||=.+|+ -|..++|+|..++ ..|++.+.+.+|++.++ ++|...
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G----------a~vi~~~~~~~~~~~~~----~lGa~~ 198 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRG----------YDVVASTGNREAADYLK----QLGASE 198 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHT----------CCEEEEESSSSTHHHHH----HHTCSE
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCC----------CEEEEEeCCHHHHHHHH----HcCCcE
Confidence 578886 89988862 3444666666543 36999999988887664 467653
No 383
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=76.86 E-value=1.4 Score=45.48 Aligned_cols=48 Identities=21% Similarity=0.229 Sum_probs=34.2
Q ss_pred CCCCCEEEeecCC--CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 76 VQPDHFVLDMCAA--PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 76 ~~pg~~VLDmCAA--PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
+++|++||-.+|+ -|.-++|++..+ ...|++.|.+.+|+..++ .+|..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~----------Ga~Vi~~~~~~~~~~~~~----~~ga~ 172 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM----------GLRVLAAASRPEKLALPL----ALGAE 172 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT----------TCEEEEEESSGGGSHHHH----HTTCS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC----------CCEEEEEeCCHHHHHHHH----hcCCC
Confidence 7899999998862 244455555543 248999999999987663 46754
No 384
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=76.28 E-value=4 Score=42.87 Aligned_cols=49 Identities=16% Similarity=0.111 Sum_probs=33.3
Q ss_pred cCCCCCCEEEeecCCC--ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAAP--GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP--GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||=.+|+. |..++|++..+ ...|++. .+.+|++.+ +.+|..
T Consensus 146 ~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~----------Ga~Vi~~-~~~~~~~~~----~~lGa~ 196 (343)
T 3gaz_A 146 AQVQDGQTVLIQGGGGGVGHVAIQIALAR----------GARVFAT-ARGSDLEYV----RDLGAT 196 (343)
T ss_dssp TCCCTTCEEEEETTTSHHHHHHHHHHHHT----------TCEEEEE-ECHHHHHHH----HHHTSE
T ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHC----------CCEEEEE-eCHHHHHHH----HHcCCC
Confidence 4688999999887532 44455555543 2479999 888887755 446754
No 385
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=75.13 E-value=12 Score=38.63 Aligned_cols=50 Identities=20% Similarity=0.194 Sum_probs=31.1
Q ss_pred cCCCCCCEEEeec-CC-CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMC-AA-PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmC-AA-PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
..+++|++||=.+ +| -|..++|+|..++ ..|++.+ +..+... ++++|...
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G----------a~vi~~~-~~~~~~~----~~~lGa~~ 199 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQKG----------TTVITTA-SKRNHAF----LKALGAEQ 199 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTT----------CEEEEEE-CHHHHHH----HHHHTCSE
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcC----------CEEEEEe-ccchHHH----HHHcCCCE
Confidence 4789999999764 22 2444556655532 4788887 5555443 45678754
No 386
>2p38_A Protein involved in ribosomal biogenesis; two alpha/beta domains, PUA domain, biosynthetic protein; 1.80A {Pyrococcus abyssi}
Probab=75.01 E-value=9.6 Score=36.75 Aligned_cols=134 Identities=15% Similarity=0.072 Sum_probs=84.6
Q ss_pred hhHHHHHhhhcCCCCCCCCCceEeecCCCCcceEEEEeCHHHHHHHHhccCCCCccEEEEceEeeEE--EecCCCCCCcc
Q 004759 503 TIINSIKTFYGIDDSFQLSGQLVSRNGDTNRVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFE--RQTSREGNSAP 580 (732)
Q Consensus 503 ~~~~~i~~fYgi~~~Fp~~~~l~~R~~~~~~~k~iy~~s~~v~~il~~n~~~g~~lkii~~GvK~F~--rq~~~~~~~~~ 580 (732)
.+++.+..| + . +..+...+.|.. ..+|||++..+.+.++.. +.++++.|+-+=. ..+++.
T Consensus 17 ~i~~~L~~y-~-~--~~~~~~~~~~~~----~~~Vy~v~~~~~~~~~~~-----~~~l~s~G~~~Gk~~~~~t~~----- 78 (166)
T 2p38_A 17 LILKEAEKY-G-E--LLHEFFCVVEGK----YRDVYAVNEEVWKIIEDI-----NMRPYSLGTFVGTIRVDENLV----- 78 (166)
T ss_dssp HHHHHHHTT-E-E--ECCCCEEEEESS----SEEEEEECHHHHHHTTTC-----CCCGGGTEEEEEEEEECTTSC-----
T ss_pred HHHHHHHHh-c-C--CCcccEEEEEcc----CcEEEEECcHHHHHhhcc-----CccceEEEEEEEEEEecccCC-----
Confidence 445556655 3 2 223334445543 489999999998875332 4677888854322 222332
Q ss_pred cceeeccCchhhhhhcccCcEEecCHHHHHHHhhcCCCCccCCCChHHHHHHhcCCCceEEEEEeCCCCCCCCCccccCC
Q 004759 581 CSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVIVLSKGGEALSNPIQIDAS 660 (732)
Q Consensus 581 c~~Ri~~eGl~~l~p~~~~r~v~~~~~d~~~lL~~~~~~~~~~~~~~~~~~~~~l~~G~~vl~~~~~~~~~~~~~~~~~~ 660 (732)
=.||++-+|+.+| ++ .+..|.++..-.+.+|-..++.-+.+.+- . +..|.-|++++. +. .
T Consensus 79 ~kf~pti~~l~~l-~~-~k~kV~V~~~ae~~flyG~dV~k~gI~~~------~-~~~~~~VvV~~~-~~----------~ 138 (166)
T 2p38_A 79 EKFYPNLEFFSLI-KL-EKNYVILGPKASFLFTTGKDAPKEAVREI------K-WQGSKRVVVLND-LG----------D 138 (166)
T ss_dssp EEEEECHHHHTTE-EE-CSSEEEECHHHHHHHHTTCCBCGGGEEEE------E-CSSCSEEEEECT-TS----------C
T ss_pred CeEEEehHHhhhc-cc-cccEEEECCcceEeeecCCCcchhcceEE------e-ecCCCEEEEEEC-CC----------c
Confidence 2799999999999 76 56677788888888887766654444321 1 566778888874 22 2
Q ss_pred eEEEEEe----eccceee
Q 004759 661 TIAIGCW----KGRASLS 674 (732)
Q Consensus 661 ~~~~~~W----~g~~s~~ 674 (732)
.+.+..+ +|+.-.|
T Consensus 139 pLG~G~a~~s~~gkvv~n 156 (166)
T 2p38_A 139 IIGIGLINPKSDRRFIKN 156 (166)
T ss_dssp EEEEEEECTTCSTTSEEE
T ss_pred EEEEEEEEECCCCEEEEE
Confidence 4777777 5665444
No 387
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=74.87 E-value=5.4 Score=42.22 Aligned_cols=52 Identities=12% Similarity=-0.059 Sum_probs=34.0
Q ss_pred hcCCC--C-------CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCH---HHHHHHHHHHHHcCCC
Q 004759 73 FLDVQ--P-------DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDV---QRCNLLIHQTKRMCTA 137 (732)
Q Consensus 73 lLd~~--p-------g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~---~Rl~~L~~n~kRlg~~ 137 (732)
.++++ + |++||-.+| |+....+++++... ...|++.|.+. +|+..++ .+|..
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~Ga--G~vG~~~~q~a~~~-------Ga~Vi~~~~~~~~~~~~~~~~----~~ga~ 229 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGT--GPIGVLFTLLFRTY-------GLEVWMANRREPTEVEQTVIE----ETKTN 229 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESC--HHHHHHHHHHHHHH-------TCEEEEEESSCCCHHHHHHHH----HHTCE
T ss_pred ccCccccccccccCCCCEEEEECC--CHHHHHHHHHHHhC-------CCEEEEEeCCccchHHHHHHH----HhCCc
Confidence 34677 8 999999997 55444444433321 24899999998 8876553 46653
No 388
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=74.72 E-value=2.3 Score=43.28 Aligned_cols=56 Identities=11% Similarity=0.154 Sum_probs=35.6
Q ss_pred ccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCC
Q 004759 175 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 238 (732)
Q Consensus 175 ~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSl 238 (732)
.+||.|++|||...... .|..+. ...........+|..+.++|++||.|+...|..
T Consensus 22 ~~vdlI~~DPPY~~~~~------~~d~~~--~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d~ 77 (260)
T 1g60_A 22 KSVQLAVIDPPYNLSKA------DWDSFD--SHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPF 77 (260)
T ss_dssp TCEEEEEECCCCSSCSS------GGGCCS--SHHHHHHHHHHHHHHHHHHEEEEEEEEEEECHH
T ss_pred cccCEEEECCCCCCCcc------cccccC--CHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCcH
Confidence 57999999999753211 011111 112223344667888889999999998876543
No 389
>1sqw_A Saccharomyces cerevisiae NIP7P homolog; PUA, unknown function; 1.90A {Homo sapiens} SCOP: b.122.1.1 d.17.6.3 PDB: 1t5y_A
Probab=74.31 E-value=2 Score=42.50 Aligned_cols=121 Identities=20% Similarity=0.262 Sum_probs=75.8
Q ss_pred hhHHHHHhhhcCCCCCCCCCceEeecCCCC-----cceEEEEeCHHHHHHHHhccCCCCccEEEEceEeeEEEecCCCCC
Q 004759 503 TIINSIKTFYGIDDSFQLSGQLVSRNGDTN-----RVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQTSREGN 577 (732)
Q Consensus 503 ~~~~~i~~fYgi~~~Fp~~~~l~~R~~~~~-----~~k~iy~~s~~v~~il~~n~~~g~~lkii~~GvK~F~rq~~~~~~ 577 (732)
.+++.+..|-|-+ . ..|+.| +++. +.+++||+|+.+.+.+++- .+.+++++|+.+ .+-. +.
T Consensus 11 ~vf~kL~~yiG~n--~---~~li~~-~~~~~~frl~~~rVyyv~~~i~~~a~~i----~r~~l~s~Gtc~-Gkft-k~-- 76 (188)
T 1sqw_A 11 VMFEKIAKYIGEN--L---QLLVDR-PDGTYCFRLHNDRVYYVSEKIMKLAANI----SGDKLVSLGTCF-GKFT-KT-- 76 (188)
T ss_dssp HHHHHHHHHHGGG--T---HHHHEE-TTEEEEEEEETTEEEEEEHHHHHTTTSS----CHHHHHHHSEEE-EEEC-TT--
T ss_pred HHHHHHHHHhccC--H---HHHhcC-CCCceEEEecCCEEEEECHHHHHHHhcC----CcCCeeEeeeEE-EEEe-cC--
Confidence 3466777786654 1 134333 2231 3589999999999975433 368899999864 4432 12
Q ss_pred CcccceeeccCchhhhhhcccCcEEecCHHHHHHHhhcCCCCccCCCChHHHHHHhcCCCceEEEEEeC
Q 004759 578 SAPCSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVIVLSK 646 (732)
Q Consensus 578 ~~~c~~Ri~~eGl~~l~p~~~~r~v~~~~~d~~~lL~~~~~~~~~~~~~~~~~~~~~l~~G~~vl~~~~ 646 (732)
=.||++-+|+.+|.||-..|+ .+..+--..+|-..++.-..+.. .=+++..|--|+++..
T Consensus 77 ---gkF~L~It~l~~La~~~~~kV-~Vk~~~E~~flyG~nVfk~~V~~-----i~e~i~~~~~VvV~n~ 136 (188)
T 1sqw_A 77 ---HKFRLHVTALDYLAPYAKYKV-WIKPGAEQSFLYGNHVLKSGLGR-----ITENTSQYQGVVVYSM 136 (188)
T ss_dssp ---SCEEECGGGHHHHGGGCSCEE-EECHHHHHHHTTTCCEEGGGEEE-----ECTTCCTTCEEEEEET
T ss_pred ---CcEEEchhHHHHhhhccCcEE-EECCCceeeEEeccchhHHhhhh-----cCCCCCCCCEEEEEeC
Confidence 289999999999999965554 55554445556555543322211 1124567777888874
No 390
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=73.49 E-value=4.3 Score=42.89 Aligned_cols=52 Identities=12% Similarity=0.025 Sum_probs=34.5
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++|++||-.+|+ |+....+++++... ...|++.+.+++|+..+ +.+|..
T Consensus 166 ~~~~~g~~vlV~Gas-ggiG~~~~~~a~~~-------Ga~Vi~~~~~~~~~~~~----~~~ga~ 217 (351)
T 1yb5_A 166 ACVKAGESVLVHGAS-GGVGLAACQIARAY-------GLKILGTAGTEEGQKIV----LQNGAH 217 (351)
T ss_dssp SCCCTTCEEEEETCS-SHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHH----HHTTCS
T ss_pred hCCCCcCEEEEECCC-ChHHHHHHHHHHHC-------CCEEEEEeCChhHHHHH----HHcCCC
Confidence 468899999988863 44444444433321 24899999999998754 346654
No 391
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=72.75 E-value=13 Score=36.89 Aligned_cols=133 Identities=11% Similarity=0.067 Sum_probs=72.4
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi-d~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
+.+|| +.-|.|+...++++.|... ...|++.+. +..++..+...++..+. ++.+...|..+...+. .
T Consensus 21 ~k~vl-ItGasggiG~~la~~l~~~-------G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~--~- 88 (274)
T 1ja9_A 21 GKVAL-TTGAGRGIGRGIAIELGRR-------GASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVV--A- 88 (274)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHH--H-
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHC-------CCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHH--H-
Confidence 55676 5556788899999888763 357889998 88888777776666553 4566666655421110 0
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccc-cChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlr-k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
...........+|.|+..+-....+.+. ..++.|..- ...++ .-...+++.++..++.||++|+.+
T Consensus 89 --------~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~---~~~n~-~~~~~l~~~~~~~~~~~~~iv~~s 155 (274)
T 1ja9_A 89 --------LFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKV---FNLNT-RGQFFVAQQGLKHCRRGGRIILTS 155 (274)
T ss_dssp --------HHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHH---HHHHT-HHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred --------HHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHH---HHHHH-HHHHHHHHHHHHHHhhCCEEEEEc
Confidence 0000001123689888755433322221 122222211 00011 123455666677776678998853
No 392
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=72.13 E-value=57 Score=32.58 Aligned_cols=62 Identities=11% Similarity=0.177 Sum_probs=47.1
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+...+++..|... ...|++.+.+..++..+...++..+..++.+...|...
T Consensus 12 ~k~vl-ITGas~GIG~~~a~~L~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~ 73 (311)
T 3o26_A 12 RRCAV-VTGGNKGIGFEICKQLSSN-------GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD 73 (311)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS
T ss_pred CcEEE-EecCCchHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC
Confidence 55566 5556688888888888653 35899999999999888888776665677777777665
No 393
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=70.70 E-value=21 Score=36.47 Aligned_cols=149 Identities=10% Similarity=0.036 Sum_probs=73.3
Q ss_pred EEccccccchhhhcCCCCCCEEEeecCCCC-hHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCce
Q 004759 61 TRQEAVSMVPPLFLDVQPDHFVLDMCAAPG-SKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANL 139 (732)
Q Consensus 61 ~~Qd~~Smlp~llLd~~pg~~VLDmCAAPG-sKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni 139 (732)
+.|.+.+|-... ..-.|.+||=.+|+.| |....++..|... ...|+.++.+.+....+.......+ .+
T Consensus 15 ~~~gp~~~~~~~--~~l~gk~~lVTGasg~~GIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~--~~ 83 (293)
T 3grk_A 15 QTQGPGSMTAQS--GLLQGKRGLILGVANNRSIAWGIAKAAREA-------GAELAFTYQGDALKKRVEPLAEELG--AF 83 (293)
T ss_dssp --------------CTTTTCEEEEECCCSSSSHHHHHHHHHHHT-------TCEEEEEECSHHHHHHHHHHHHHHT--CE
T ss_pred cccCCCCCCccc--ccCCCCEEEEEcCCCCCcHHHHHHHHHHHC-------CCEEEEEcCCHHHHHHHHHHHHhcC--Cc
Confidence 345555554432 1224678887777754 5777777777652 3578999998766666665555554 45
Q ss_pred EEEecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCC----CCcc-ccChhhhhhcccccccchHHHH
Q 004759 140 IVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG----DGTL-RKAPDIWRKWNVGLGNGLHSLQ 214 (732)
Q Consensus 140 ~Vt~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSG----dGtl-rk~pd~w~~ws~~~~~~L~~lQ 214 (732)
.+...|..+...+. . ...........+|.++..+--.. .+.+ ...++.|.+ .-..++ .-.
T Consensus 84 ~~~~~Dv~d~~~v~--~---------~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~---~~~~N~-~g~ 148 (293)
T 3grk_A 84 VAGHCDVADAASID--A---------VFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTN---TMLISV-YSL 148 (293)
T ss_dssp EEEECCTTCHHHHH--H---------HHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHH---HHHHHT-HHH
T ss_pred eEEECCCCCHHHHH--H---------HHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHH---HHHHHH-HHH
Confidence 66666665422110 0 00001112246898887553222 1111 112222322 111111 223
Q ss_pred HHHHHHHHhhccCCCEEEEEc
Q 004759 215 VQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 215 ~~IL~rAl~lLKpGGrLVYST 235 (732)
..+++.++.+++.+|+||+.+
T Consensus 149 ~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 149 TAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHHhccCCCEEEEEe
Confidence 456777788888899999764
No 394
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=70.23 E-value=8.1 Score=39.82 Aligned_cols=141 Identities=13% Similarity=0.144 Sum_probs=84.0
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC-----CH----------------------HHHHHHH--
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-----DV----------------------QRCNLLI-- 128 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi-----d~----------------------~Rl~~L~-- 128 (732)
|| .|+.++..-|+-+..++.+...-. + ..+...|+++|. .. ..+..+.
T Consensus 70 pG-~ivE~GV~rG~S~~~~a~~~~~l~-~-~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~ 146 (257)
T 3tos_A 70 PG-VIMEFGVRFGRHLGTFAALRGVYE-P-YNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDA 146 (257)
T ss_dssp CS-EEEEECCTTCHHHHHHHHHHHHHC-T-TCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHH
T ss_pred CC-eEEEEecccCHHHHHHHHHHHHhc-c-cCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHH
Confidence 45 899999999998888776533100 0 013578899882 11 1122111
Q ss_pred -HHHHHcCC--CceEEEecccccC-CCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhccc
Q 004759 129 -HQTKRMCT--ANLIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNV 204 (732)
Q Consensus 129 -~n~kRlg~--~ni~Vt~~Da~~f-p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~ 204 (732)
++.++++. .++.+..+++... |.+. .......||.|.+|+-
T Consensus 147 ~~~~~~~g~~~~~i~li~G~~~dTL~~~l----------------~~~~~~~~dlv~ID~D------------------- 191 (257)
T 3tos_A 147 HECSDFFGHVTQRSVLVEGDVRETVPRYL----------------AENPQTVIALAYFDLD------------------- 191 (257)
T ss_dssp HHTTSTTTTSCCSEEEEESCHHHHHHHHH----------------HHCTTCCEEEEEECCC-------------------
T ss_pred HhhhhhcCCCCCcEEEEEecHHHHHHHHH----------------HhCCCCceEEEEEcCc-------------------
Confidence 12234564 5788888877541 1100 0011246999999873
Q ss_pred ccccchHHHHHHHHHHHHhhccCCCEEEEEcCC--CCCcCcHHHHHHHHHHCCCcEEEEe
Q 004759 205 GLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS--MNPVENEAVVAEILRKCEGSVELVD 262 (732)
Q Consensus 205 ~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCS--lnp~ENEaVV~~~L~~~~~~velvd 262 (732)
+..-....+...+.+|++||.||.=-.. -.|.+.+|| .+++.+.+-.++.+.
T Consensus 192 -----~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~w~G~~~A~-~ef~~~~~~~i~~~p 245 (257)
T 3tos_A 192 -----LYEPTKAVLEAIRPYLTKGSIVAFDELDNPKWPGENIAM-RKVLGLDHAPLRLLP 245 (257)
T ss_dssp -----CHHHHHHHHHHHGGGEEEEEEEEESSTTCTTCTHHHHHH-HHHTCTTSSCCEECT
T ss_pred -----ccchHHHHHHHHHHHhCCCcEEEEcCCCCCCChHHHHHH-HHHHhhCCCeEEEcc
Confidence 0112245677888999999999977653 235555555 788877765555544
No 395
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=69.97 E-value=21 Score=35.76 Aligned_cols=132 Identities=8% Similarity=0.005 Sum_probs=75.0
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCC------------HHHHHHHHHHHHHcCCCceEEEeccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLD------------VQRCNLLIHQTKRMCTANLIVTNHEA 146 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid------------~~Rl~~L~~n~kRlg~~ni~Vt~~Da 146 (732)
|.+||=.+ |.|+....++..|... ...|+.+|.+ .+++..+...+...+ ..+.+...|.
T Consensus 10 gk~vlVTG-as~gIG~~ia~~l~~~-------G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~ 80 (287)
T 3pxx_A 10 DKVVLVTG-GARGQGRSHAVKLAEE-------GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-RKAYTAEVDV 80 (287)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHT-------TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-SCEEEEECCT
T ss_pred CCEEEEeC-CCChHHHHHHHHHHHC-------CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-CceEEEEccC
Confidence 55666444 5677888888887753 3589999987 777777777666655 3566666666
Q ss_pred ccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhcc
Q 004759 147 QHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK 226 (732)
Q Consensus 147 ~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLK 226 (732)
.+...+. . ...........+|.++..+--...+ ....++-|...-. .++ .-...+++.++.+++
T Consensus 81 ~~~~~v~--~---------~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~---~N~-~g~~~l~~~~~~~~~ 144 (287)
T 3pxx_A 81 RDRAAVS--R---------ELANAVAEFGKLDVVVANAGICPLG-AHLPVQAFADAFD---VDF-VGVINTVHAALPYLT 144 (287)
T ss_dssp TCHHHHH--H---------HHHHHHHHHSCCCEEEECCCCCCCC-TTCCTHHHHHHHH---HHT-HHHHHHHHHHGGGCC
T ss_pred CCHHHHH--H---------HHHHHHHHcCCCCEEEECCCcCccc-CcCCHHHHHHHhh---hhh-hhhHHHHHHHHHHhh
Confidence 5422110 0 0000011124689998866433333 1123333432111 111 123456777888888
Q ss_pred CCCEEEEEc
Q 004759 227 VGGRIVYST 235 (732)
Q Consensus 227 pGGrLVYST 235 (732)
.+|+||+.+
T Consensus 145 ~~g~iv~is 153 (287)
T 3pxx_A 145 SGASIITTG 153 (287)
T ss_dssp TTCEEEEEC
T ss_pred cCcEEEEec
Confidence 899999864
No 396
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=69.75 E-value=7.8 Score=41.16 Aligned_cols=47 Identities=19% Similarity=0.183 Sum_probs=33.1
Q ss_pred CCCCEEEeecCC--CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 77 QPDHFVLDMCAA--PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 77 ~pg~~VLDmCAA--PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
++|++||=.+|+ -|..++|+|.+++ ..|++.. +.+|+.++ +++|...
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G----------a~Vi~~~-~~~~~~~~----~~lGa~~ 211 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG----------YIPIATC-SPHNFDLA----KSRGAEE 211 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT----------CEEEEEE-CGGGHHHH----HHTTCSE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC----------CEEEEEe-CHHHHHHH----HHcCCcE
Confidence 899999988874 4666777776643 3688874 78887754 4578653
No 397
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=69.01 E-value=14 Score=38.63 Aligned_cols=54 Identities=17% Similarity=0.034 Sum_probs=35.1
Q ss_pred cCCCCC--CEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 74 LDVQPD--HFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 74 Ld~~pg--~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
.++++| ++||-.+|+ |+....+++++... +.+.|++.|.+.+|+..+.+ .+|..
T Consensus 154 ~~~~~g~~~~vlI~Gas-ggiG~~~~~~a~~~------Ga~~Vi~~~~~~~~~~~~~~---~~g~~ 209 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGAA-GACGSVAGQIGHFL------GCSRVVGICGTHEKCILLTS---ELGFD 209 (357)
T ss_dssp SCCCTTSCCEEEESSTT-BHHHHHHHHHHHHT------TCSEEEEEESCHHHHHHHHH---TSCCS
T ss_pred cCCCCCCccEEEEECCC-cHHHHHHHHHHHHC------CCCeEEEEeCCHHHHHHHHH---HcCCc
Confidence 468899 999988763 44444444444331 12389999999988876643 25653
No 398
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=68.98 E-value=8.4 Score=40.39 Aligned_cols=50 Identities=14% Similarity=0.048 Sum_probs=31.4
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
++|+.++=+.+|.|+....+++++... ...|++.|.+.+|++.++ ++|..
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~-------Ga~Vi~~~~~~~~~~~~~----~~Ga~ 211 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEE-------GFRPIVTVRRDEQIALLK----DIGAA 211 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHH-------TCEEEEEESCGGGHHHHH----HHTCS
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHH----HcCCC
Confidence 566434446666666655444444321 248999999999988764 46754
No 399
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=68.73 E-value=12 Score=39.27 Aligned_cols=55 Identities=13% Similarity=0.109 Sum_probs=33.8
Q ss_pred cCCCCCCEEEeecC--CCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMCA--APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmCA--APGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
.++++|++||=.+| +-|..++|+|..++ ...|+..+.+.++.+.+ ..++.+|...
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~~G---------a~vi~~~~~~~~~~~~~-~~~~~lGa~~ 219 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAALG---------LRTINVVRDRPDIQKLS-DRLKSLGAEH 219 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT---------CEEEEEECCCSCHHHHH-HHHHHTTCSE
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHHcC---------CEEEEEecCccchHHHH-HHHHhcCCcE
Confidence 47899999998886 34566777777654 23555666654332211 2345688654
No 400
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=68.32 E-value=10 Score=39.81 Aligned_cols=55 Identities=13% Similarity=0.163 Sum_probs=32.7
Q ss_pred cCCCCC-CEEEeecC--CCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPD-HFVLDMCA--APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg-~~VLDmCA--APGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
.++++| ++||=.+| +-|..++|+|..++ ..|++...+..++......++++|...
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G----------a~vi~~~~~~~~~~~~~~~~~~lGa~~ 219 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLN----------FNSISVIRDRPNLDEVVASLKELGATQ 219 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHT----------CEEEEEECCCTTHHHHHHHHHHHTCSE
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCC----------CEEEEEecCccccHHHHHHHHhcCCeE
Confidence 378899 99997765 23445667766643 367777655443222223345678654
No 401
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=67.50 E-value=5.5 Score=42.04 Aligned_cols=53 Identities=13% Similarity=0.136 Sum_probs=35.3
Q ss_pred ccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCC
Q 004759 175 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 239 (732)
Q Consensus 175 ~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSln 239 (732)
..||.|++|||.... .+.|.. ...........|..+.++|++||.|+.. |+.+
T Consensus 57 ~svDlI~tDPPY~~~------~d~~~~-----~~~~~~~~~~~l~~~~rvLk~~G~i~i~-~~~~ 109 (319)
T 1eg2_A 57 DSVQLIICDPPYNIM------LADWDD-----HMDYIGWAKRWLAEAERVLSPTGSIAIF-GGLQ 109 (319)
T ss_dssp TCEEEEEECCCSBCC------GGGGGT-----CSSHHHHHHHHHHHHHHHEEEEEEEEEE-ECSC
T ss_pred CCcCEEEECCCCCCC------CCCccC-----HHHHHHHHHHHHHHHHHHcCCCeEEEEE-cCcc
Confidence 579999999997542 122221 1223344567778889999999998775 4543
No 402
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=67.09 E-value=26 Score=35.80 Aligned_cols=62 Identities=5% Similarity=0.006 Sum_probs=45.0
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
.|..||=.+ |.|+....++..|... ...|++.+.+..++..+...+...+. ++.+...|..+
T Consensus 30 ~gk~vlVTG-as~gIG~~la~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 91 (301)
T 3tjr_A 30 DGRAAVVTG-GASGIGLATATEFARR-------GARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRH 91 (301)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCC
Confidence 466777555 5577888888887753 35899999999999988887776653 46666666654
No 403
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=65.67 E-value=34 Score=34.00 Aligned_cols=133 Identities=9% Similarity=0.018 Sum_probs=73.3
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNF 158 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~ 158 (732)
|.+|| +.-|.|+....++..|... ...|+..|.+..++..+.+.+...+ ..+.+...|..+...+.-
T Consensus 12 ~k~vl-VTGas~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~---- 78 (256)
T 3gaf_A 12 DAVAI-VTGAAAGIGRAIAGTFAKA-------GASVVVTDLKSEGAEAVAAAIRQAG-GKAIGLECNVTDEQHREA---- 78 (256)
T ss_dssp TCEEE-ECSCSSHHHHHHHHHHHHH-------TCEEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHH----
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHH----
Confidence 45555 4556677788888877653 3579999999999988888887765 345666666654211100
Q ss_pred CCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhcc--CCCEEEEEc
Q 004759 159 SSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK--VGGRIVYST 235 (732)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLK--pGGrLVYST 235 (732)
............|.++..+--...+.+...++-|.+--.-+ + .-...+++.++..++ .+|+||+.+
T Consensus 79 -------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN---~-~g~~~l~~~~~~~~~~~~~g~iv~is 146 (256)
T 3gaf_A 79 -------VIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLN---L-FSLFRLSQLAAPHMQKAGGGAILNIS 146 (256)
T ss_dssp -------HHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHH---T-HHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred -------HHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH---h-HHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 00000111246899988664444343323334443211111 1 112345555555553 368888753
No 404
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=65.39 E-value=10 Score=40.27 Aligned_cols=47 Identities=17% Similarity=0.181 Sum_probs=30.7
Q ss_pred CCCCCEEEeecCC--CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC
Q 004759 76 VQPDHFVLDMCAA--PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 137 (732)
Q Consensus 76 ~~pg~~VLDmCAA--PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ 137 (732)
+++|++||=.+|+ -|..++|+|..+ ...|++.+ +.+|+..+ +.+|..
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~----------Ga~Vi~~~-~~~~~~~~----~~lGa~ 229 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW----------DAHVTAVC-SQDASELV----RKLGAD 229 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT----------TCEEEEEE-CGGGHHHH----HHTTCS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC----------CCEEEEEe-ChHHHHHH----HHcCCC
Confidence 8899999988743 233455555543 24788888 66776654 457765
No 405
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=64.51 E-value=18 Score=35.75 Aligned_cols=135 Identities=6% Similarity=-0.032 Sum_probs=72.7
Q ss_pred CCCCEEEeecCC-CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccC
Q 004759 77 QPDHFVLDMCAA-PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 155 (732)
Q Consensus 77 ~pg~~VLDmCAA-PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~ 155 (732)
..+.+||=.+|+ +|+....++..|... ...|+..+.+.+....+....+..+ .+.+...|..+...+.
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~-- 80 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKRE-------GAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQID-- 80 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT-------TCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHH--
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHc-------CCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHHH--
Confidence 457788877764 377888888887753 3589999988666666655555554 2455566655422110
Q ss_pred CCCCCCCccccccccccccccccEEEecCCCCCC----Cccc--cChhhhhhcccccccchHHHHHHHHHHHHhhccCCC
Q 004759 156 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD----GTLR--KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 229 (732)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGd----Gtlr--k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGG 229 (732)
. ............|.++..+--... +.+. ..++-|.+--.. ++ .-...+++.++..++.+|
T Consensus 81 ~---------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~---n~-~~~~~l~~~~~~~~~~~g 147 (271)
T 3ek2_A 81 A---------LFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDI---SA-YSFPALAKAALPMLSDDA 147 (271)
T ss_dssp H---------HHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHH---HT-THHHHHHHHHGGGEEEEE
T ss_pred H---------HHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhh---hH-HHHHHHHHHHHHHhccCc
Confidence 0 000001122468988885532221 1111 122223221000 11 123456777788888889
Q ss_pred EEEEEc
Q 004759 230 RIVYST 235 (732)
Q Consensus 230 rLVYST 235 (732)
+||+.+
T Consensus 148 ~iv~is 153 (271)
T 3ek2_A 148 SLLTLS 153 (271)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 988754
No 406
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=64.41 E-value=28 Score=35.26 Aligned_cols=62 Identities=3% Similarity=-0.070 Sum_probs=44.2
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
|.+|| +.-|.|+....++..|... ...|++.|.+..++..+...+...+...+.+...|..+
T Consensus 33 gk~~l-VTGas~GIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d 94 (281)
T 4dry_A 33 GRIAL-VTGGGTGVGRGIAQALSAE-------GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD 94 (281)
T ss_dssp -CEEE-ETTTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC
Confidence 55555 4556688888888888753 45899999999999888887766554445666677654
No 407
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=64.15 E-value=2.8 Score=44.16 Aligned_cols=46 Identities=15% Similarity=0.200 Sum_probs=27.0
Q ss_pred cCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHH
Q 004759 74 LDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLL 127 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L 127 (732)
.++++|++||=.+|+ |+....++++... .....|++.+ +..+...+
T Consensus 138 ~~~~~g~~VlV~Ga~-G~vG~~a~qla~~------~g~~~V~~~~-~~~~~~~~ 183 (349)
T 4a27_A 138 ANLREGMSVLVHSAG-GGVGQAVAQLCST------VPNVTVFGTA-STFKHEAI 183 (349)
T ss_dssp SCCCTTCEEEESSTT-SHHHHHHHHHHTT------STTCEEEEEE-CGGGHHHH
T ss_pred cCCCCCCEEEEEcCC-cHHHHHHHHHHHH------cCCcEEEEeC-CHHHHHHH
Confidence 468999999987774 3433333333321 1135788888 55555544
No 408
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=63.47 E-value=32 Score=33.51 Aligned_cols=61 Identities=7% Similarity=0.173 Sum_probs=43.5
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+...+++..|... ...|++.+.+..++..+...++..+. ++.+...|..+
T Consensus 11 ~~~vl-VtGasggiG~~la~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 71 (255)
T 1fmc_A 11 GKCAI-ITGAGAGIGKEIAITFATA-------GASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITS 71 (255)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHTT-------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCccHHHHHHHHHHHHC-------CCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCC
Confidence 45565 4556788899999888752 35799999999988877777766553 45666666554
No 409
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=63.21 E-value=26 Score=34.80 Aligned_cols=134 Identities=13% Similarity=0.033 Sum_probs=72.9
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc--CCCceEEEecccccCCCCccCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM--CTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl--g~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
+.+|| +.-|.|+....++..|... ...|+..+.+..++..+...+... +...+.+...|..+...+.-
T Consensus 7 ~k~~l-VTGas~GIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~-- 76 (250)
T 3nyw_A 7 KGLAI-ITGASQGIGAVIAAGLATD-------GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADT-- 76 (250)
T ss_dssp CCEEE-EESTTSHHHHHHHHHHHHH-------TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHH--
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHH--
Confidence 44555 4455677788888877653 358999999999999888887765 32456666666654221100
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhcc--CCCEEEEE
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK--VGGRIVYS 234 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLK--pGGrLVYS 234 (732)
............|.++..+--...+.+...++-|.+--.-+ + .-...+++.++..++ .+|+||+.
T Consensus 77 ---------~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN---~-~g~~~l~~~~~~~~~~~~~g~iv~i 143 (250)
T 3nyw_A 77 ---------EIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEIN---V-IAQYGILKTVTEIMKVQKNGYIFNV 143 (250)
T ss_dssp ---------HHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHH---T-HHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred ---------HHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHH---H-HHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 00000111246898888664444444422233343211111 1 112334555555543 46888875
Q ss_pred c
Q 004759 235 T 235 (732)
Q Consensus 235 T 235 (732)
+
T Consensus 144 s 144 (250)
T 3nyw_A 144 A 144 (250)
T ss_dssp C
T ss_pred c
Confidence 4
No 410
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=62.99 E-value=18 Score=36.15 Aligned_cols=130 Identities=7% Similarity=0.063 Sum_probs=73.1
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNF 158 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~ 158 (732)
|.+||=.+ |.|+....++..|... ...|+..|.+..++..+.+.+ + .++.+...|..+...+.-
T Consensus 8 gk~~lVTG-as~gIG~a~a~~l~~~-------G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~---- 71 (255)
T 4eso_A 8 GKKAIVIG-GTHGMGLATVRRLVEG-------GAEVLLTGRNESNIARIREEF---G-PRVHALRSDIADLNEIAV---- 71 (255)
T ss_dssp TCEEEEET-CSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHH---G-GGEEEEECCTTCHHHHHH----
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHH----
Confidence 55666555 5677888888887653 358999999999887766544 2 346666666654221100
Q ss_pred CCCCccccccccccccccccEEEecCCCCCCCcccc-ChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 159 SSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRK-APDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk-~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
...........+|.++..+-.+..+.+.. .++.|.+- -..++ .-...+++.++.+++.+|+||+.+
T Consensus 72 -------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---~~~N~-~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 72 -------LGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQ---FAVNT-KGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp -------HHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHH---HHHHT-HHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred -------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---HHHhh-HHHHHHHHHHHHHHhcCCEEEEEC
Confidence 00000112246898888654433333222 23333321 11111 123456777788888899999864
No 411
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=62.88 E-value=1e+02 Score=30.44 Aligned_cols=62 Identities=6% Similarity=0.024 Sum_probs=43.6
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi-d~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+....++..|... ...|++.+. +..++..+...+......++.+...|...
T Consensus 11 ~k~~l-VTGas~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 73 (276)
T 1mxh_A 11 CPAAV-ITGGARRIGHSIAVRLHQQ-------GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 73 (276)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC-------CCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCC
Confidence 44566 5667788889998888753 358999999 98888877777655412356666677655
No 412
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=62.75 E-value=39 Score=33.46 Aligned_cols=134 Identities=12% Similarity=0.083 Sum_probs=74.1
Q ss_pred CCEEEeecCCCC-hHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPG-SKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPG-sKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
+.+||=.+| .| +....++..|... ...|+.+|.+..++..+...++..+..++.+...|..+...+.-
T Consensus 22 ~k~vlITGa-sg~GIG~~~a~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~--- 90 (266)
T 3o38_A 22 GKVVLVTAA-AGTGIGSTTARRALLE-------GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDA--- 90 (266)
T ss_dssp TCEEEESSC-SSSSHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHH---
T ss_pred CCEEEEECC-CCCchHHHHHHHHHHC-------CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHH---
Confidence 566775555 34 4667777776652 35799999999999888888876665677888777665221110
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccc-cChhhhhhcccccccchHHHHHHHHHHHHhhcc---CCCEEEE
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK---VGGRIVY 233 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlr-k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLK---pGGrLVY 233 (732)
...........+|.|+..+--+..+.+. ..++.|.+--..+. .-...+++.++.+++ .+|+||+
T Consensus 91 --------~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~----~~~~~l~~~~~~~~~~~~~~~~iv~ 158 (266)
T 3o38_A 91 --------LITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTL----TSVMRATRAALRYFRGVDHGGVIVN 158 (266)
T ss_dssp --------HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT----HHHHHHHHHHHHHHHTSSCCEEEEE
T ss_pred --------HHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHh----HHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 0000011124689999866444333322 12333332111111 122345555555553 5688887
Q ss_pred Ec
Q 004759 234 ST 235 (732)
Q Consensus 234 ST 235 (732)
.+
T Consensus 159 ~s 160 (266)
T 3o38_A 159 NA 160 (266)
T ss_dssp EC
T ss_pred eC
Confidence 53
No 413
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=61.63 E-value=5.6 Score=41.46 Aligned_cols=39 Identities=23% Similarity=0.337 Sum_probs=33.1
Q ss_pred HHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHC
Q 004759 216 QIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKC 254 (732)
Q Consensus 216 ~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~ 254 (732)
-+-..|+.+|+|||.+|...--+----.|.||.++-++.
T Consensus 240 mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF 278 (324)
T 3trk_A 240 MLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKF 278 (324)
T ss_dssp HHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTE
T ss_pred HHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhh
Confidence 355689999999999999999998888899998877653
No 414
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=61.62 E-value=4.8 Score=42.37 Aligned_cols=67 Identities=15% Similarity=0.192 Sum_probs=39.7
Q ss_pred ccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHH
Q 004759 175 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILR 252 (732)
Q Consensus 175 ~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~ 252 (732)
.++|.||+|+.-.-.|. ++ ..-......++. ++.-|+++|+|||.+|--.-...--.-|.++..+.+
T Consensus 205 ~k~DvV~SDMApn~sGh---------~y-qQC~DHarii~L-al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR 271 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYH---------HY-QQCEDHAIKLSM-LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIAR 271 (320)
T ss_dssp CCEEEEEEECCCCCCSC---------HH-HHHHHHHHHHHH-THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHT
T ss_pred CcCCEEEEcCCCCCCCc---------cc-cccchHHHHHHH-HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHH
Confidence 67999999975444442 00 000011112333 889999999999999976555532244556555444
No 415
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=61.59 E-value=39 Score=33.67 Aligned_cols=62 Identities=5% Similarity=0.087 Sum_probs=46.1
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
|.+|| +.-|.|+....++..|... ...|+..|.+..++..+...++..+...+.+...|..+
T Consensus 10 ~k~vl-VTGas~gIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~ 71 (262)
T 3pk0_A 10 GRSVV-VTGGTKGIGRGIATVFARA-------GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD 71 (262)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC
Confidence 55565 4556678888888887652 35899999999999888888877665567777777655
No 416
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=59.24 E-value=37 Score=33.58 Aligned_cols=60 Identities=8% Similarity=-0.040 Sum_probs=42.5
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEA 146 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da 146 (732)
|..||= .-|.|+....++..|... ...|+..|.+..++..+...+...+...+.+...|.
T Consensus 12 ~k~vlV-TGas~gIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~ 71 (252)
T 3f1l_A 12 DRIILV-TGASDGIGREAAMTYARY-------GATVILLGRNEEKLRQVASHINEETGRQPQWFILDL 71 (252)
T ss_dssp TCEEEE-ESTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCT
T ss_pred CCEEEE-eCCCChHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 556664 445677888888887652 358999999999998888877665544555555555
No 417
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=58.78 E-value=52 Score=32.73 Aligned_cols=133 Identities=11% Similarity=0.053 Sum_probs=72.5
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHH-cCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR-MCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kR-lg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
+..||= .-|.|+....++..+... ...|+.+|.+..++..+...+.. .+..++.+...|..+...+.-
T Consensus 8 ~k~~lV-TGas~GIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~--- 76 (265)
T 3lf2_A 8 EAVAVV-TGGSSGIGLATVELLLEA-------GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRA--- 76 (265)
T ss_dssp TCEEEE-ETCSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHH---
T ss_pred CCEEEE-eCCCChHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHH---
Confidence 445554 445677888888887653 35799999999999888887766 444456777777655221100
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccc-cChhhhhhcccccccchHHHHHHHHHHHHhhccC--CCEEEEE
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKV--GGRIVYS 234 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlr-k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKp--GGrLVYS 234 (732)
............|.++..+--+..+.+. ..++.|.+- -..++ .-...+++.++..++. +|+||+.
T Consensus 77 --------~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~---~~~N~-~g~~~~~~~~~~~~~~~~~g~iv~i 144 (265)
T 3lf2_A 77 --------FAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEE---LQLKF-FSVIHPVRAFLPQLESRADAAIVCV 144 (265)
T ss_dssp --------HHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHH---HHHHH-HHHHHHHHHHHHHHTTSTTEEEEEE
T ss_pred --------HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---HHHHH-HHHHHHHHHHHHHhhccCCeEEEEE
Confidence 0000011124689888865433333222 123333321 11111 1223455666666543 6788864
No 418
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=57.90 E-value=60 Score=32.30 Aligned_cols=133 Identities=9% Similarity=0.030 Sum_probs=72.9
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHH-cCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR-MCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kR-lg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
|.+|| +.-|.|+....++..|... ...|+..+.+..++..+...+.. .+ ..+.+...|..+...+.-
T Consensus 20 ~k~vl-VTGas~gIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~--- 87 (266)
T 4egf_A 20 GKRAL-ITGATKGIGADIARAFAAA-------GARLVLSGRDVSELDAARRALGEQFG-TDVHTVAIDLAEPDAPAE--- 87 (266)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTSTTHHHH---
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHH---
Confidence 55565 4556678888888888753 35899999999999888777765 33 456677777665322110
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccc-cChhhhhhcccccccchHHHHHHHHHHHHhhcc---CCCEEEE
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK---VGGRIVY 233 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlr-k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLK---pGGrLVY 233 (732)
............|.++..+--...+.+. ..++.|.+--.-+ + .-...+++.++..++ .+|+||+
T Consensus 88 --------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N---~-~g~~~l~~~~~~~~~~~~~~g~iv~ 155 (266)
T 4egf_A 88 --------LARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVN---L-RAPALLASAVGKAMVAAGEGGAIIT 155 (266)
T ss_dssp --------HHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHH---T-HHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred --------HHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHH---h-HHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 0000011224689998866444333322 2233343211111 1 112334444444443 3689988
Q ss_pred Ec
Q 004759 234 ST 235 (732)
Q Consensus 234 ST 235 (732)
.+
T Consensus 156 is 157 (266)
T 4egf_A 156 VA 157 (266)
T ss_dssp EC
T ss_pred Ec
Confidence 54
No 419
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=57.64 E-value=1.2e+02 Score=33.29 Aligned_cols=126 Identities=16% Similarity=0.210 Sum_probs=72.9
Q ss_pred CCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHH------------HHc-CCCceEEEecccccCCCCcc
Q 004759 88 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQT------------KRM-CTANLIVTNHEAQHFPGCRA 154 (732)
Q Consensus 88 APGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~------------kRl-g~~ni~Vt~~Da~~fp~~~~ 154 (732)
|.|+..+-+|..|... .-.|+++|+++++++.|.... ++. ...++.++. |
T Consensus 18 GlGyvGlp~A~~La~~-------G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~tt-d--------- 80 (431)
T 3ojo_A 18 GLGYIGLPTSIMFAKH-------GVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVST-T--------- 80 (431)
T ss_dssp CCSTTHHHHHHHHHHT-------TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEES-S---------
T ss_pred eeCHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeC-c---------
Confidence 6777777777777652 247999999999999886520 100 011222221 0
Q ss_pred CCCCCCCCccccccccccccccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 155 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
...-|.|++=+|-..+..-.+.||+ ..+ ....+...+.|++|..+|+.
T Consensus 81 -------------------~~~aDvvii~VpTp~~~~~~~~~Dl------------~~V-~~~~~~i~~~l~~g~iVV~~ 128 (431)
T 3ojo_A 81 -------------------PEASDVFIIAVPTPNNDDQYRSCDI------------SLV-MRALDSILPFLKKGNTIIVE 128 (431)
T ss_dssp -------------------CCCCSEEEECCCCCBCSSSSCBBCC------------HHH-HHHHHHHGGGCCTTEEEEEC
T ss_pred -------------------hhhCCEEEEEeCCCccccccCCccH------------HHH-HHHHHHHHHhCCCCCEEEEe
Confidence 0236888886663321100012332 111 22344556778897777765
Q ss_pred cCCCCCcCcHHHHHHHHHHCCC----cEEEEec
Q 004759 235 TCSMNPVENEAVVAEILRKCEG----SVELVDV 263 (732)
Q Consensus 235 TCSlnp~ENEaVV~~~L~~~~~----~velvd~ 263 (732)
+ |+.|.-.+.+...+++..+. .+.+++.
T Consensus 129 S-TV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~ 160 (431)
T 3ojo_A 129 S-TIAPKTMDDFVKPVIENLGFTIGEDIYLVHC 160 (431)
T ss_dssp S-CCCTTHHHHTHHHHHHTTTCCBTTTEEEEEC
T ss_pred c-CCChhHHHHHHHHHHHHcCCCcCCCeEEEEC
Confidence 4 88888889988888875442 3566664
No 420
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=57.64 E-value=62 Score=32.25 Aligned_cols=62 Identities=18% Similarity=0.124 Sum_probs=44.6
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~ 148 (732)
+..||= .-|.|+....++..|... ...|++++.+..++..+...++..+. ..+.+...|..+
T Consensus 32 ~k~vlV-TGasggIG~~la~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 94 (279)
T 1xg5_A 32 DRLALV-TGASGGIGAAVARALVQQ-------GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94 (279)
T ss_dssp TCEEEE-ESTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC
T ss_pred CCEEEE-ECCCchHHHHHHHHHHHC-------CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC
Confidence 556664 456788888888887652 35899999999998888777777664 346666666654
No 421
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=57.54 E-value=27 Score=35.85 Aligned_cols=62 Identities=8% Similarity=0.072 Sum_probs=45.4
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
|.+|| +.-|.|+....++..|... ...|+..|.+..++..+...+...+...+.+...|..+
T Consensus 41 ~k~vl-VTGas~GIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d 102 (293)
T 3rih_A 41 ARSVL-VTGGTKGIGRGIATVFARA-------GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD 102 (293)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHT-------TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC
Confidence 44555 5556788888888888653 35899999999998888777766654567777777655
No 422
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=57.43 E-value=68 Score=33.06 Aligned_cols=62 Identities=5% Similarity=0.029 Sum_probs=45.3
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~ 148 (732)
|.+||=.+ |+|+...+++..|... ...|++.+.+..++..+...+...+. .++.+...|..+
T Consensus 8 ~k~vlVTG-as~gIG~~la~~l~~~-------G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~ 70 (319)
T 3ioy_A 8 GRTAFVTG-GANGVGIGLVRQLLNQ-------GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70 (319)
T ss_dssp TCEEEEET-TTSTHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC
T ss_pred CCEEEEcC-CchHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC
Confidence 55666555 5577888888888653 35899999999999988888776654 257777777655
No 423
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=56.66 E-value=57 Score=32.50 Aligned_cols=134 Identities=13% Similarity=0.141 Sum_probs=73.5
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi-d~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
|.+||= .-|.|+....++..|... ...|+..+. +.+++..+...++..+. ++.+...|..+...+.-
T Consensus 18 ~k~~lV-TGas~gIG~aia~~l~~~-------G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~--- 85 (270)
T 3is3_A 18 GKVALV-TGSGRGIGAAVAVHLGRL-------GAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVK--- 85 (270)
T ss_dssp TCEEEE-SCTTSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHH---
T ss_pred CCEEEE-ECCCchHHHHHHHHHHHC-------CCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHH---
Confidence 556664 445677788888887652 347777665 56777777777776653 45666666654221100
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCcccc-ChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRK-APDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk-~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
............|.++..+--...+.+.. .++-|.+- -..++ .-...+++.++..++.+|+||+.+.
T Consensus 86 --------~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~---~~~N~-~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 86 --------LFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRV---FSLNT-RGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp --------HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHH---HHHHT-HHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred --------HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---HHHHh-HHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 00000111246788887554333333221 23333321 11111 1234567778888888999998644
No 424
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=55.51 E-value=81 Score=30.61 Aligned_cols=61 Identities=8% Similarity=0.061 Sum_probs=44.6
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+...+++..|... ...|++.+.+..++..+...++..+. .+.+...|..+
T Consensus 5 ~k~vl-ITGas~gIG~~~a~~l~~~-------G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 65 (247)
T 3lyl_A 5 EKVAL-VTGASRGIGFEVAHALASK-------GATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISD 65 (247)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCCChHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCC
Confidence 44555 4556788888888888763 35899999999999988888877653 46666666654
No 425
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=54.77 E-value=1.2e+02 Score=30.29 Aligned_cols=61 Identities=8% Similarity=0.081 Sum_probs=42.6
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi-d~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+..||=. -|.|+....+++.|... ...|+.+|. +..++..+...+...+ ..+.+...|..+
T Consensus 29 ~k~~lVT-Gas~GIG~aia~~la~~-------G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d 90 (280)
T 4da9_A 29 RPVAIVT-GGRRGIGLGIARALAAS-------GFDIAITGIGDAEGVAPVIAELSGLG-ARVIFLRADLAD 90 (280)
T ss_dssp CCEEEEE-TTTSHHHHHHHHHHHHT-------TCEEEEEESCCHHHHHHHHHHHHHTT-CCEEEEECCTTS
T ss_pred CCEEEEe-cCCCHHHHHHHHHHHHC-------CCeEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEecCCC
Confidence 5556644 45677788888887652 357888885 7888888777776665 356667777665
No 426
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=53.32 E-value=57 Score=32.26 Aligned_cols=61 Identities=10% Similarity=0.088 Sum_probs=44.5
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+....++..|... ...|++.|.+..++..+...++..+ .++.+...|..+
T Consensus 7 ~k~vl-VTGas~GIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~ 67 (252)
T 3h7a_A 7 NATVA-VIGAGDYIGAEIAKKFAAE-------GFTVFAGRRNGEKLAPLVAEIEAAG-GRIVARSLDARN 67 (252)
T ss_dssp SCEEE-EECCSSHHHHHHHHHHHHT-------TCEEEEEESSGGGGHHHHHHHHHTT-CEEEEEECCTTC
T ss_pred CCEEE-EECCCchHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECcCCC
Confidence 44555 4456677888888887753 3589999999999998888887765 356666777655
No 427
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=52.44 E-value=55 Score=33.22 Aligned_cols=133 Identities=12% Similarity=0.061 Sum_probs=71.1
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHH-HHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQR-CNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~R-l~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
|.+||=.+ |.|+....++..|... ...|+..+.+... ...+...++..+ ..+.+...|..+...+.-
T Consensus 47 gk~vlVTG-as~GIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~--- 114 (291)
T 3ijr_A 47 GKNVLITG-GDSGIGRAVSIAFAKE-------GANIAIAYLDEEGDANETKQYVEKEG-VKCVLLPGDLSDEQHCKD--- 114 (291)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHTTT-CCEEEEESCTTSHHHHHH---
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHC-------CCEEEEEeCCchHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHH---
Confidence 55666555 5677788888887652 3578899988654 444444444444 356666677654221100
Q ss_pred CCCCCccccccccccccccccEEEecCCCCC-CCccc-cChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSG-DGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSG-dGtlr-k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
...........+|.++..+--.. .+.+. ..++.|.+- -..++ .-...+++.++..++.+|+||+.+
T Consensus 115 --------~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~---~~vN~-~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 115 --------IVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKT---FRINI-FSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp --------HHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHH---HHHHT-HHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred --------HHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHH---HHHHh-HHHHHHHHHHHHHHhhCCEEEEEe
Confidence 00000111246898887553221 11111 123333321 11111 223567788888888999999864
No 428
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=52.37 E-value=52 Score=33.02 Aligned_cols=133 Identities=9% Similarity=0.041 Sum_probs=66.2
Q ss_pred CCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
|.+||=.+|++ |+....++..|... ...|++++.+......+.+.....+ ++.+...|..+...+. .
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~--~- 88 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHRE-------GAQLAFTYATPKLEKRVREIAKGFG--SDLVVKCDVSLDEDIK--N- 88 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHT-------TCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHH--H-
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHc-------CCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHH--H-
Confidence 66788777763 88888888887652 3579999988752223322222233 2444555554421110 0
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCC----Ccc-ccChhhhhhcccccccchHHHHHHHHHHHHhhcc-CCCEE
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGD----GTL-RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK-VGGRI 231 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGd----Gtl-rk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLK-pGGrL 231 (732)
...........+|.|+..+-.... +.+ ...++.|...-. .++ .-...+++.++..++ .+|+|
T Consensus 89 --------~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~---~N~-~g~~~l~~~~~~~~~~~~g~i 156 (285)
T 2p91_A 89 --------LKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMD---ISV-YSLIALTRELLPLMEGRNGAI 156 (285)
T ss_dssp --------HHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHH---HHT-HHHHHHHHHHGGGGTTSCCEE
T ss_pred --------HHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHH---Hhh-HHHHHHHHHHHHHHHHcCCEE
Confidence 000001112468999886532221 111 122233322100 111 122345666676665 67999
Q ss_pred EEEc
Q 004759 232 VYST 235 (732)
Q Consensus 232 VYST 235 (732)
|+.+
T Consensus 157 v~is 160 (285)
T 2p91_A 157 VTLS 160 (285)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9764
No 429
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=52.19 E-value=60 Score=31.28 Aligned_cols=61 Identities=7% Similarity=0.077 Sum_probs=42.5
Q ss_pred CEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 80 HFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 80 ~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
.+|| +.-|.|+....++..+... ...|+..+.+..++..+.+.+.......+.+...|..+
T Consensus 3 k~vl-ITGas~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 63 (235)
T 3l77_A 3 KVAV-ITGASRGIGEAIARALARD-------GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 63 (235)
T ss_dssp CEEE-EESCSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC
T ss_pred CEEE-EECCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCC
Confidence 3444 4456788888888888753 35799999999999888877753222456666677654
No 430
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=51.73 E-value=55 Score=34.92 Aligned_cols=63 Identities=10% Similarity=0.059 Sum_probs=44.3
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT---ANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~---~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|+|+...+|++.|... +...|+++|.+...+..+...+..... .++.+..+|..+
T Consensus 35 ~k~vL-VTGatG~IG~~l~~~L~~~------g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d 100 (399)
T 3nzo_A 35 QSRFL-VLGGAGSIGQAVTKEIFKR------NPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGS 100 (399)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHTT------CCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTS
T ss_pred CCEEE-EEcCChHHHHHHHHHHHHC------CCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCC
Confidence 56666 4446799999999988752 114899999999998887777655321 456666666554
No 431
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=51.34 E-value=94 Score=34.63 Aligned_cols=46 Identities=20% Similarity=0.217 Sum_probs=31.8
Q ss_pred HHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHH-HHCC----CcEEEEec
Q 004759 217 IAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEIL-RKCE----GSVELVDV 263 (732)
Q Consensus 217 IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L-~~~~----~~velvd~ 263 (732)
.++.....|++|..+|+.+ |+.|.-.+.+...++ +..+ ..+.+++.
T Consensus 129 ~~~~i~~~l~~g~iVV~~S-Tv~pgtt~~v~~~ile~~~g~~~~~d~~v~~~ 179 (478)
T 3g79_A 129 GIRNVGKYLKPGMLVVLES-TITPGTTEGMAKQILEEESGLKAGEDFALAHA 179 (478)
T ss_dssp HHHHHHHHCCTTCEEEECS-CCCTTTTTTHHHHHHHHHHCCCBTTTBEEEEC
T ss_pred HHHHHHhhcCCCcEEEEeC-CCChHHHHHHHHHHHHHhcCCCcCCceeEEeC
Confidence 3445566789988777654 888999999988888 3333 23566664
No 432
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=50.88 E-value=1.1e+02 Score=30.49 Aligned_cols=76 Identities=14% Similarity=0.135 Sum_probs=42.3
Q ss_pred CcEEEccc--cccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC
Q 004759 58 GNITRQEA--VSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC 135 (732)
Q Consensus 58 G~i~~Qd~--~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg 135 (732)
+.+.+|.. .+|....-+ .|.+|| +.-|.|+....++..|... ...|+..|.+..++..+...+ +
T Consensus 10 ~~~~~~~~gp~~m~~~~~l---~~k~vl-VTGas~GIG~aia~~l~~~-------G~~Vi~~~r~~~~~~~~~~~~---~ 75 (281)
T 3ppi_A 10 GTLEAQTQGPGSMVTIKQF---EGASAI-VSGGAGGLGEATVRRLHAD-------GLGVVIADLAAEKGKALADEL---G 75 (281)
T ss_dssp --------------CCGGG---TTEEEE-EETTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHH---C
T ss_pred CCCCCcccCcchhhhhhcc---CCCEEE-EECCCChHHHHHHHHHHHC-------CCEEEEEeCChHHHHHHHHHh---C
Confidence 44555543 444332222 255666 4556677888888887653 357999999999887766654 3
Q ss_pred CCceEEEeccccc
Q 004759 136 TANLIVTNHEAQH 148 (732)
Q Consensus 136 ~~ni~Vt~~Da~~ 148 (732)
.++.+...|..+
T Consensus 76 -~~~~~~~~Dl~~ 87 (281)
T 3ppi_A 76 -NRAEFVSTNVTS 87 (281)
T ss_dssp -TTEEEEECCTTC
T ss_pred -CceEEEEcCCCC
Confidence 356677777654
No 433
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=50.82 E-value=62 Score=31.57 Aligned_cols=61 Identities=10% Similarity=0.129 Sum_probs=44.3
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+||= .-|.|+....++..|... ...|++.|.+..++..+.+.++..+ ..+.+...|..+
T Consensus 9 ~k~vlI-TGas~giG~~~a~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 69 (253)
T 3qiv_A 9 NKVGIV-TGSGGGIGQAYAEALARE-------GAAVVVADINAEAAEAVAKQIVADG-GTAISVAVDVSD 69 (253)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTS
T ss_pred CCEEEE-ECCCChHHHHHHHHHHHC-------CCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEEEccCCC
Confidence 555664 446688888888888763 3579999999999998888877655 345666666654
No 434
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=50.63 E-value=1e+02 Score=30.42 Aligned_cols=61 Identities=8% Similarity=0.032 Sum_probs=44.7
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+||= .-|.|+....++..|... ...|++.+.+..++..+...+...+. .+.+...|..+
T Consensus 29 ~k~vlI-TGas~gIG~~la~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 89 (262)
T 3rkr_A 29 GQVAVV-TGASRGIGAAIARKLGSL-------GARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSH 89 (262)
T ss_dssp TCEEEE-SSTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCEEEE-ECCCChHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCC
Confidence 556664 446688888888888753 35799999999999988888876653 46666666654
No 435
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=49.12 E-value=64 Score=31.75 Aligned_cols=59 Identities=7% Similarity=0.034 Sum_probs=40.9
Q ss_pred EEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 81 FVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 81 ~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+|| +.-|.|+....++..|... ...|++.+.+..++..+...+...+ .++.+...|..+
T Consensus 4 ~vl-VTGas~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 62 (256)
T 1geg_A 4 VAL-VTGAGQGIGKAIALRLVKD-------GFAVAIADYNDATAKAVASEINQAG-GHAVAVKVDVSD 62 (256)
T ss_dssp EEE-EETTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTS
T ss_pred EEE-EECCCChHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCC
Confidence 444 4446788888888888753 3589999999998887777666554 345566666554
No 436
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=49.07 E-value=1.4e+02 Score=29.36 Aligned_cols=61 Identities=8% Similarity=0.034 Sum_probs=42.6
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
|.+|| +.-|.|+....++..|... ...|++++.+..++..+...+...+ ..+.+...|..+
T Consensus 9 ~k~vl-VTGas~giG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 69 (260)
T 2ae2_A 9 GCTAL-VTGGSRGIGYGIVEELASL-------GASVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSS 69 (260)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCC
Confidence 55666 4456788888888887752 3589999999998887777665554 245566666554
No 437
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=48.93 E-value=84 Score=31.21 Aligned_cols=61 Identities=8% Similarity=0.073 Sum_probs=42.3
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCC------------HHHHHHHHHHHHHcCCCceEEEeccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLD------------VQRCNLLIHQTKRMCTANLIVTNHEA 146 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid------------~~Rl~~L~~n~kRlg~~ni~Vt~~Da 146 (732)
|.+||=.+ |.|+....++..|... ...|+++|.+ .+++..+...+...+. .+.+...|.
T Consensus 13 gk~vlVTG-as~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~ 83 (278)
T 3sx2_A 13 GKVAFITG-AARGQGRAHAVRLAAD-------GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADV 83 (278)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHT-------TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCT
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHC-------CCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCC
Confidence 55666444 6677888888887653 4579999987 7777777777766653 566666776
Q ss_pred cc
Q 004759 147 QH 148 (732)
Q Consensus 147 ~~ 148 (732)
.+
T Consensus 84 ~~ 85 (278)
T 3sx2_A 84 RD 85 (278)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 438
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=48.80 E-value=84 Score=31.57 Aligned_cols=76 Identities=9% Similarity=0.018 Sum_probs=47.3
Q ss_pred ccccccchhhhcCCCCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEE
Q 004759 63 QEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVT 142 (732)
Q Consensus 63 Qd~~Smlp~llLd~~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt 142 (732)
+.+.+|-....+++ .|.+||= .-|.|+....++..|... ...|+.++.+..++..+...+...+. .+.+.
T Consensus 17 ~g~~~m~~~~~~~l-~gk~~lV-TGas~GIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~ 86 (276)
T 3r1i_A 17 QGPGSMSVLDLFDL-SGKRALI-TGASTGIGKKVALAYAEA-------GAQVAVAARHSDALQVVADEIAGVGG-KALPI 86 (276)
T ss_dssp ------CGGGGGCC-TTCEEEE-ESTTSHHHHHHHHHHHHT-------TCEEEEEESSGGGGHHHHHHHHHTTC-CCEEE
T ss_pred cCCCCcccccccCC-CCCEEEE-eCCCCHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEE
Confidence 34555543333343 3556664 445678888888887753 45899999999999888888876653 45556
Q ss_pred eccccc
Q 004759 143 NHEAQH 148 (732)
Q Consensus 143 ~~Da~~ 148 (732)
..|..+
T Consensus 87 ~~Dl~d 92 (276)
T 3r1i_A 87 RCDVTQ 92 (276)
T ss_dssp ECCTTC
T ss_pred EcCCCC
Confidence 666654
No 439
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=48.59 E-value=87 Score=30.32 Aligned_cols=60 Identities=8% Similarity=-0.007 Sum_probs=44.7
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEA 146 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da 146 (732)
|.+|| +.-|.|+...+++..|... ...|+..+.+..++..+...++..+...+.+...|.
T Consensus 14 ~k~vl-ITGas~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~ 73 (247)
T 3i1j_A 14 GRVIL-VTGAARGIGAAAARAYAAH-------GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNL 73 (247)
T ss_dssp TCEEE-ESSTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCT
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHC-------CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEecc
Confidence 55666 4556688888888888753 358999999999999998888887755555555554
No 440
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=48.48 E-value=41 Score=33.62 Aligned_cols=133 Identities=9% Similarity=0.052 Sum_probs=67.1
Q ss_pred CCEEEeecCC-CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAA-PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAA-PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
+.+||=.+|+ +|+....++..|... ...|++++.+......+.+.....+ .+.+...|..+...+. .
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~-------G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~--~- 73 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQ-------GATLAFTYLNESLEKRVRPIAQELN--SPYVYELDVSKEEHFK--S- 73 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTT-------TCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHHH--H-
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEcCCCCHHHHH--H-
Confidence 5677777775 388888999888752 3579999988752222222222233 2445555554421110 0
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCC----Ccc-ccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGD----GTL-RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGd----Gtl-rk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
...........+|.++..+--... +.+ ...++-|... -..++ .-...+++.++..++.+|+||
T Consensus 74 --------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~---~~~N~-~g~~~l~~~~~~~~~~~g~iv 141 (275)
T 2pd4_A 74 --------LYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTA---MEISV-YSLIELTNTLKPLLNNGASVL 141 (275)
T ss_dssp --------HHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHH---HHHHT-HHHHHHHHHHGGGEEEEEEEE
T ss_pred --------HHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHH---HHHHh-HHHHHHHHHHHHHhccCCEEE
Confidence 000001112468988875532221 111 1122223221 00111 223456677777777789999
Q ss_pred EEc
Q 004759 233 YST 235 (732)
Q Consensus 233 YST 235 (732)
+.+
T Consensus 142 ~is 144 (275)
T 2pd4_A 142 TLS 144 (275)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 441
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=48.29 E-value=88 Score=31.26 Aligned_cols=62 Identities=5% Similarity=-0.026 Sum_probs=44.4
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC--ceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~--ni~Vt~~Da~~ 148 (732)
+.+||=.+ |.|+...+++..|... ...|+.+|.+..++..+...++..+.. .+.+...|..+
T Consensus 11 ~k~vlVTG-as~gIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~ 74 (281)
T 3svt_A 11 DRTYLVTG-GGSGIGKGVAAGLVAA-------GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN 74 (281)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC
Confidence 55666444 5677888888887653 358999999999998888887766543 46666666654
No 442
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=48.28 E-value=42 Score=33.23 Aligned_cols=133 Identities=14% Similarity=0.074 Sum_probs=66.5
Q ss_pred CCEEEeecCC-CChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAA-PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAA-PGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
+.+||=.+|+ .|+....++..|... ...|++.+.+.+....+.+.....+ .+.+...|..+...+. .
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~--~- 75 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEA-------GAEVALSYQAERLRPEAEKLAEALG--GALLFRADVTQDEELD--A- 75 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHH-------TCEEEEEESCGGGHHHHHHHHHHTT--CCEEEECCTTCHHHHH--H-
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHC-------CCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEECCCCCHHHHH--H-
Confidence 5677777775 378888888877652 3579999988753223332222333 2455566655421110 0
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCC----Ccc-ccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEE
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGD----GTL-RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 232 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGd----Gtl-rk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLV 232 (732)
...........+|.|+..+--... +.+ ...++.|.+. -..++ .-...+++.++..++.+|+||
T Consensus 76 --------~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~---~~~N~-~g~~~l~~~~~~~~~~~g~iv 143 (261)
T 2wyu_A 76 --------LFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA---LEVSA-YSLVAVARRAEPLLREGGGIV 143 (261)
T ss_dssp --------HHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHH---HHHHT-HHHHHHHHHHTTTEEEEEEEE
T ss_pred --------HHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHH---HHHhh-HHHHHHHHHHHHHhccCCEEE
Confidence 000000112368988875532211 111 1122223221 01111 123456677777777789999
Q ss_pred EEc
Q 004759 233 YST 235 (732)
Q Consensus 233 YST 235 (732)
+.+
T Consensus 144 ~is 146 (261)
T 2wyu_A 144 TLT 146 (261)
T ss_dssp EEE
T ss_pred EEe
Confidence 754
No 443
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=48.16 E-value=1e+02 Score=31.26 Aligned_cols=62 Identities=8% Similarity=0.036 Sum_probs=44.0
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC--ceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~--ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+....++..|... ...|++++.+..++..+...+...+.. ++.+...|..+
T Consensus 26 ~k~vl-VTGas~gIG~aia~~L~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d 89 (297)
T 1xhl_A 26 GKSVI-ITGSSNGIGRSAAVIFAKE-------GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 89 (297)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC
Confidence 55565 5556788888888888752 358999999999988877777665532 56666666654
No 444
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=47.41 E-value=80 Score=31.76 Aligned_cols=62 Identities=2% Similarity=0.097 Sum_probs=42.4
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi-d~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+||=.+ |.|+....++..|... ...|+..|. +..++..+...+.......+.+...|..+
T Consensus 25 ~k~~lVTG-as~GIG~~ia~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d 87 (281)
T 3v2h_A 25 TKTAVITG-STSGIGLAIARTLAKA-------GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK 87 (281)
T ss_dssp TCEEEEET-CSSHHHHHHHHHHHHT-------TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTC
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHC-------CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCC
Confidence 45566444 5677888888887753 358999998 77788777776665544566666666654
No 445
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=47.38 E-value=16 Score=41.68 Aligned_cols=39 Identities=23% Similarity=0.388 Sum_probs=33.3
Q ss_pred HHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHHC
Q 004759 216 QIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKC 254 (732)
Q Consensus 216 ~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~~ 254 (732)
-|-..|+.+|+|||.+|.-.--+----.|.||.++-++.
T Consensus 250 ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF 288 (670)
T 4gua_A 250 TLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKF 288 (670)
T ss_dssp HHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTE
T ss_pred HHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhhe
Confidence 355689999999999999988998888899998887754
No 446
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=47.17 E-value=1e+02 Score=30.82 Aligned_cols=134 Identities=7% Similarity=0.024 Sum_probs=73.7
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi-d~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
|.+||=.+ |.|+....++..|... ...|+..+. +..++..+...++..+. .+.+...|..+...+.-
T Consensus 31 gk~~lVTG-as~GIG~aia~~la~~-------G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~--- 98 (271)
T 3v2g_A 31 GKTAFVTG-GSRGIGAAIAKRLALE-------GAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQ--- 98 (271)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHH---
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHC-------CCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHH---
Confidence 55666555 5577788888877652 346777755 46778877777776653 45666666654221100
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCcccc-ChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRK-APDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk-~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
............|.++..+-....+.+.. .++.|.+. -..++ .-...+++.++..++.+|+||+.+.
T Consensus 99 --------~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~---~~vN~-~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 99 --------AIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEV---MAVNF-RAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp --------HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---HHHHT-HHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred --------HHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHH---HHHHh-HHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 00000111246899988664333333221 23333321 11111 1234567778888888999998654
No 447
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=46.94 E-value=97 Score=30.07 Aligned_cols=60 Identities=12% Similarity=0.109 Sum_probs=40.6
Q ss_pred CCCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 77 QPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 77 ~pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
.++.+|| +.-|.|+...+++..|... ...|++.+.+..++..+...+ . .++.+...|...
T Consensus 12 ~~~k~vl-VTGas~gIG~~~a~~l~~~-------G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~ 71 (249)
T 3f9i_A 12 LTGKTSL-ITGASSGIGSAIARLLHKL-------GSKVIISGSNEEKLKSLGNAL---K-DNYTIEVCNLAN 71 (249)
T ss_dssp CTTCEEE-ETTTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHH---C-SSEEEEECCTTS
T ss_pred CCCCEEE-EECCCChHHHHHHHHHHHC-------CCEEEEEcCCHHHHHHHHHHh---c-cCccEEEcCCCC
Confidence 3466777 5556678888888887753 358999999998887765543 2 345555565544
No 448
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=46.65 E-value=64 Score=32.74 Aligned_cols=133 Identities=10% Similarity=0.002 Sum_probs=71.4
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCC--HHHHHHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLD--VQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid--~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
|.+||=.+ |.|+....++..|... ...|+.++.+ ..+...+...+...+ .++.+...|..+...+. .
T Consensus 49 ~k~vlVTG-as~GIG~aia~~la~~-------G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~--~ 117 (294)
T 3r3s_A 49 DRKALVTG-GDSGIGRAAAIAYARE-------GADVAINYLPAEEEDAQQVKALIEECG-RKAVLLPGDLSDESFAR--S 117 (294)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHT-------TCEEEEECCGGGHHHHHHHHHHHHHTT-CCEEECCCCTTSHHHHH--H
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHC-------CCEEEEEeCCcchhHHHHHHHHHHHcC-CcEEEEEecCCCHHHHH--H
Confidence 55666555 5678888888887753 3578888876 345666666666655 34555556654421110 0
Q ss_pred CCCCCCccccccccccccccccEEEecCCCCC-CCccc-cChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEE
Q 004759 157 NFSSASDKGIESESNMGQLLFDRVLCDVPCSG-DGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 234 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSG-dGtlr-k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYS 234 (732)
...........+|.++..+--.. .+.+. -.++.|.+- -..++ .-...+++.++..++.+|+||+.
T Consensus 118 ---------~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~---~~vN~-~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 118 ---------LVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQT---FAVNV-FALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp ---------HHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHH---HHHHT-HHHHHHHHHHGGGCCTTCEEEEE
T ss_pred ---------HHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHH---HHHHh-HHHHHHHHHHHHHhhcCCEEEEE
Confidence 00000111246898887553221 12121 123333321 11111 22345778888888889999986
Q ss_pred c
Q 004759 235 T 235 (732)
Q Consensus 235 T 235 (732)
+
T Consensus 185 s 185 (294)
T 3r3s_A 185 S 185 (294)
T ss_dssp C
T ss_pred C
Confidence 4
No 449
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=46.56 E-value=93 Score=31.15 Aligned_cols=61 Identities=8% Similarity=0.128 Sum_probs=43.0
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+....++..|... ...|+..+.+..++..+...++..+. .+.+...|..+
T Consensus 4 ~k~~l-VTGas~GIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 64 (264)
T 3tfo_A 4 DKVIL-ITGASGGIGEGIARELGVA-------GAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTD 64 (264)
T ss_dssp TCEEE-ESSTTSHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCEEE-EeCCccHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 34555 4456678888888887653 45799999999999988888776653 45555566554
No 450
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=46.29 E-value=39 Score=33.15 Aligned_cols=62 Identities=13% Similarity=0.050 Sum_probs=38.4
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT------ANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~------~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+...+++..|... ...|++.+.+..++..+...+...+. .++.+...|..+
T Consensus 7 ~k~vl-ITGasggiG~~la~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 74 (264)
T 2pd6_A 7 SALAL-VTGAGSGIGRAVSVRLAGE-------GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSE 74 (264)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTS
T ss_pred CCEEE-EECCCChHHHHHHHHHHHC-------CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCC
Confidence 44566 4556788888888887652 35899999998887766554433331 345555566544
No 451
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=46.14 E-value=29 Score=37.31 Aligned_cols=52 Identities=17% Similarity=0.342 Sum_probs=32.5
Q ss_pred ccccEEEecCCCCCCCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHH
Q 004759 175 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 253 (732)
Q Consensus 175 ~~FDrVL~DvPCSGdGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~ 253 (732)
..||.||+-+| .... + ..-...|.+++..|++||+|+..- +|...|..+++.
T Consensus 100 ~~~d~v~~~~P------------------k~k~--~-~~~~~~l~~~~~~l~~g~~i~~~g------~~~~g~~~~~~~ 151 (381)
T 3dmg_A 100 GAYDLVVLALP------------------AGRG--T-AYVQASLVAAARALRMGGRLYLAG------DKNKGFERYFKE 151 (381)
T ss_dssp TCEEEEEEECC------------------GGGC--H-HHHHHHHHHHHHHEEEEEEEEEEE------EGGGTHHHHHHH
T ss_pred CCCCEEEEECC------------------cchh--H-HHHHHHHHHHHHhCCCCCEEEEEE------ccHHHHHHHHHH
Confidence 67999999777 0111 1 122346778889999999987542 334455555543
No 452
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=45.38 E-value=1.2e+02 Score=29.54 Aligned_cols=61 Identities=13% Similarity=0.200 Sum_probs=42.3
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi-d~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+....++..|... ...|++.+. +..++..+...+...+. .+.+...|..+
T Consensus 4 ~k~vl-VTGas~giG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 65 (246)
T 2uvd_A 4 GKVAL-VTGASRGIGRAIAIDLAKQ-------GANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVAN 65 (246)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHC-------CCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 44555 5556788888888888752 357899998 88888877777665543 45556666554
No 453
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=45.36 E-value=1.3e+02 Score=29.77 Aligned_cols=61 Identities=8% Similarity=0.002 Sum_probs=44.1
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+....++..|... ...|++.|.+..++..+...++..+. ++.+...|..+
T Consensus 31 ~k~vl-ITGasggIG~~la~~L~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~ 91 (272)
T 1yb1_A 31 GEIVL-ITGAGHGIGRLTAYEFAKL-------KSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSN 91 (272)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCCchHHHHHHHHHHHC-------CCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCC
Confidence 55666 4556788888898888753 35799999999988888777766553 56666676654
No 454
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=45.19 E-value=69 Score=32.04 Aligned_cols=134 Identities=10% Similarity=0.090 Sum_probs=72.2
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEE-eCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIAN-DLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAn-Did~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
+..|| +.-|.|+....++..|... ...|+.+ ..+..++..+...+...+. .+.+...|..+...+.-
T Consensus 27 ~k~~l-VTGas~GIG~aia~~la~~-------G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~--- 94 (267)
T 3u5t_A 27 NKVAI-VTGASRGIGAAIAARLASD-------GFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRR--- 94 (267)
T ss_dssp CCEEE-EESCSSHHHHHHHHHHHHH-------TCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHH---
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHC-------CCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHH---
Confidence 55666 4445677778888777652 2456665 5677778777777766653 45566666554221100
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCcccc-ChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEcC
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRK-APDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 236 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk-~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYSTC 236 (732)
............|.++..+--...+.+.. .++.|.+- -..++ .-...+++.++..++.+|+||+.+.
T Consensus 95 --------~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~---~~vN~-~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 95 --------LFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRV---IAVNL-KGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp --------HHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHH---HHHHH-HHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred --------HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---HHHHH-HHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 00000111246898888654333333222 22333321 11111 1234567778888888999998653
No 455
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=44.98 E-value=1.6e+02 Score=29.06 Aligned_cols=62 Identities=11% Similarity=0.050 Sum_probs=42.9
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~ 148 (732)
|.+|| +.-|.|+....++..+... ...|++.|.+..++..+.+.+...+. ..+.....|...
T Consensus 10 ~k~~l-VTGas~gIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 72 (267)
T 3t4x_A 10 GKTAL-VTGSTAGIGKAIATSLVAE-------GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT 72 (267)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC
Confidence 45566 4556688888888887753 35899999999999888887766542 345555555543
No 456
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=44.66 E-value=97 Score=31.07 Aligned_cols=62 Identities=6% Similarity=0.040 Sum_probs=43.5
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc----CCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl----g~~ni~Vt~~Da~~ 148 (732)
+.+||=.+ |.|+...+++..|... ...|++++.+..++..+...+... ...++.+...|..+
T Consensus 18 ~k~vlVTG-asggIG~~la~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T 1yxm_A 18 GQVAIVTG-GATGIGKAIVKELLEL-------GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN 83 (303)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCC
Confidence 56677554 6688888888888753 357999999999888777776552 12356667777654
No 457
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=44.41 E-value=61 Score=32.57 Aligned_cols=61 Identities=3% Similarity=-0.017 Sum_probs=42.8
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+..||=.+ |.|+....++..|... ...|++.+.+..++..+...++..+ ..+.+...|..+
T Consensus 24 ~k~~lVTG-as~GIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d 84 (279)
T 3sju_A 24 PQTAFVTG-VSSGIGLAVARTLAAR-------GIAVYGCARDAKNVSAAVDGLRAAG-HDVDGSSCDVTS 84 (279)
T ss_dssp -CEEEEES-TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHTTT-CCEEEEECCTTC
T ss_pred CCEEEEeC-CCCHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCC
Confidence 55666444 5677788888887653 3589999999999988887776554 346666666654
No 458
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=44.10 E-value=2.6e+02 Score=27.94 Aligned_cols=63 Identities=11% Similarity=0.045 Sum_probs=42.3
Q ss_pred CCCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEE-eccccc
Q 004759 78 PDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVT-NHEAQH 148 (732)
Q Consensus 78 pg~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt-~~Da~~ 148 (732)
.+.+||= .-|.|....+++..|... .-.|++.+.+..+...+...+......++.+. ..|..+
T Consensus 10 ~~~~vlV-TGatG~iG~~l~~~L~~~-------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d 73 (342)
T 1y1p_A 10 EGSLVLV-TGANGFVASHVVEQLLEH-------GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK 73 (342)
T ss_dssp TTCEEEE-ETTTSHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS
T ss_pred CCCEEEE-ECCccHHHHHHHHHHHHC-------CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC
Confidence 4677874 446789999999888652 34899999998877666554433222456665 566654
No 459
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=43.95 E-value=74 Score=31.88 Aligned_cols=62 Identities=2% Similarity=-0.022 Sum_probs=42.9
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+||= .-|.|+...+++..|... ...|++.+.+..++..+...+......++.+...|..+
T Consensus 26 ~k~vlI-TGasggiG~~la~~L~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~ 87 (302)
T 1w6u_A 26 GKVAFI-TGGGTGLGKGMTTLLSSL-------GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD 87 (302)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC
T ss_pred CCEEEE-ECCCchHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC
Confidence 556664 446688888888888753 35799999999888877666654412356666777654
No 460
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=43.72 E-value=65 Score=32.22 Aligned_cols=61 Identities=7% Similarity=-0.004 Sum_probs=41.6
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC-------------CHHHHHHHHHHHHHcCCCceEEEecc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-------------DVQRCNLLIHQTKRMCTANLIVTNHE 145 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi-------------d~~Rl~~L~~n~kRlg~~ni~Vt~~D 145 (732)
|.+||=.+ |.|+....++..|... ...|+++|. +.+++..+.+.+...+ ..+.+...|
T Consensus 15 gk~~lVTG-as~gIG~a~a~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D 85 (280)
T 3pgx_A 15 GRVAFITG-AARGQGRSHAVRLAAE-------GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-RKALTRVLD 85 (280)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHT-------TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT-CCEEEEECC
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHC-------CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-CeEEEEEcC
Confidence 55666444 5577788888887753 458999998 6788887777766555 345566666
Q ss_pred ccc
Q 004759 146 AQH 148 (732)
Q Consensus 146 a~~ 148 (732)
..+
T Consensus 86 v~~ 88 (280)
T 3pgx_A 86 VRD 88 (280)
T ss_dssp TTC
T ss_pred CCC
Confidence 554
No 461
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=43.63 E-value=50 Score=32.74 Aligned_cols=133 Identities=11% Similarity=0.032 Sum_probs=65.3
Q ss_pred CCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
+.+||=.+|+. |+....++..|... ...|++++.+......+.+.....+. ..+...|..+...+. .
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~--~- 76 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHRE-------GAELAFTYQNDKLKGRVEEFAAQLGS--DIVLQCDVAEDASID--T- 76 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHT-------TCEEEEEESSTTTHHHHHHHHHHTTC--CCEEECCTTCHHHHH--H-
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHC-------CCEEEEEcCcHHHHHHHHHHHHhcCC--cEEEEccCCCHHHHH--H-
Confidence 56777677653 88888888888753 35799999887222222222222332 234445544321110 0
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCC----Cccc--cChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEE
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGD----GTLR--KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRI 231 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGd----Gtlr--k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrL 231 (732)
...........+|.++..+-.... +.+. ..++.|.+. -..++ .-...+++.++..++.+|+|
T Consensus 77 --------~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~---~~~N~-~g~~~l~~~~~~~~~~~g~i 144 (265)
T 1qsg_A 77 --------MFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIA---HDISS-YSFVAMAKACRSMLNPGSAL 144 (265)
T ss_dssp --------HHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHH---HHHHT-HHHHHHHHHHGGGEEEEEEE
T ss_pred --------HHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHH---HHHHh-HHHHHHHHHHHHHhccCCEE
Confidence 000001112468988885532221 1111 122223221 00111 12345677777777778999
Q ss_pred EEEc
Q 004759 232 VYST 235 (732)
Q Consensus 232 VYST 235 (732)
|+.+
T Consensus 145 v~is 148 (265)
T 1qsg_A 145 LTLS 148 (265)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9764
No 462
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=42.73 E-value=94 Score=31.11 Aligned_cols=61 Identities=8% Similarity=0.106 Sum_probs=43.7
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
|.+|| +.-|.|+....++..|... ...|+.+|.+..++..+...++..+. ++.+...|..+
T Consensus 26 gk~~l-VTGas~gIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 86 (271)
T 4ibo_A 26 GRTAL-VTGSSRGLGRAMAEGLAVA-------GARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTS 86 (271)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT-------TCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCC
Confidence 45555 4556778888888888653 35899999999999888888776653 45555566554
No 463
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=42.64 E-value=1.3e+02 Score=29.69 Aligned_cols=61 Identities=7% Similarity=0.009 Sum_probs=42.4
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+....++..|... ...|++++.+..++..+...+...+ ..+.+...|..+
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 67 (262)
T 1zem_A 7 GKVCL-VTGAGGNIGLATALRLAEE-------GTAIALLDMNREALEKAEASVREKG-VEARSYVCDVTS 67 (262)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHTTT-SCEEEEECCTTC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCC
Confidence 55666 4556778888888888753 3579999999988887777665544 245666666554
No 464
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=42.40 E-value=1.2e+02 Score=30.62 Aligned_cols=61 Identities=13% Similarity=0.194 Sum_probs=44.3
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
|..+|=-+ |.+|.-..++..+... ...|+.+|.+.++++.+...++..|. ++.....|..+
T Consensus 7 gKvalVTG-as~GIG~aiA~~la~~-------Ga~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~ 67 (254)
T 4fn4_A 7 NKVVIVTG-AGSGIGRAIAKKFALN-------DSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSK 67 (254)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTS
T ss_pred CCEEEEeC-CCCHHHHHHHHHHHHc-------CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCC
Confidence 55666555 4556677777777652 46899999999999999998888774 45666677654
No 465
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=41.87 E-value=1.7e+02 Score=32.02 Aligned_cols=35 Identities=14% Similarity=0.019 Sum_probs=27.6
Q ss_pred CCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHH
Q 004759 88 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIH 129 (732)
Q Consensus 88 APGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~ 129 (732)
|.|.....+|..+... .-.|+++|++++++..+..
T Consensus 9 G~G~vG~~lA~~La~~-------G~~V~~~D~~~~~v~~l~~ 43 (450)
T 3gg2_A 9 GIGYVGLVSATCFAEL-------GANVRCIDTDRNKIEQLNS 43 (450)
T ss_dssp CCSHHHHHHHHHHHHT-------TCEEEEECSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHhc-------CCEEEEEECCHHHHHHHHc
Confidence 6688888888877652 2479999999999988765
No 466
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=41.75 E-value=1.5e+02 Score=28.37 Aligned_cols=59 Identities=8% Similarity=0.041 Sum_probs=40.3
Q ss_pred EEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEE-EeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 81 FVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIA-NDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 81 ~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvA-nDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+|| +.-|.|+...+++..|... ...|++ .+.+..+...+...+...+. ++.+...|..+
T Consensus 3 ~vl-VTGasggiG~~la~~l~~~-------G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 62 (244)
T 1edo_A 3 VVV-VTGASRGIGKAIALSLGKA-------GCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSK 62 (244)
T ss_dssp EEE-ETTCSSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTS
T ss_pred EEE-EeCCCchHHHHHHHHHHHC-------CCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCCCCC
Confidence 444 5567788889999888753 346777 47888888877776665553 45566666554
No 467
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=41.70 E-value=1.2e+02 Score=30.67 Aligned_cols=61 Identities=11% Similarity=0.073 Sum_probs=42.4
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+||= .-|.|+....++..|... ...|++++.+..++..+...+...+. .+.+...|..+
T Consensus 34 ~k~vlV-TGas~gIG~aia~~L~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 94 (291)
T 3cxt_A 34 GKIALV-TGASYGIGFAIASAYAKA-------GATIVFNDINQELVDRGMAAYKAAGI-NAHGYVCDVTD 94 (291)
T ss_dssp TCEEEE-ETCSSHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTC
T ss_pred CCEEEE-eCCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEecCCC
Confidence 556664 456688888888887652 35899999999988877777665553 45555666554
No 468
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=41.63 E-value=1.1e+02 Score=30.43 Aligned_cols=133 Identities=13% Similarity=0.099 Sum_probs=69.2
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHH-HHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQR-CNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~R-l~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
|.+|| +.-|.|+....++..|... ...|++.+.+... ...+...+...+. ++.+...|......+. .
T Consensus 29 ~k~vl-VTGas~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~--~- 96 (283)
T 1g0o_A 29 GKVAL-VTGAGRGIGREMAMELGRR-------GCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIV--R- 96 (283)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHH--H-
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC-------CCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHH--H-
Confidence 55555 4556788888888888763 3578888887643 4555555555543 4555566654321110 0
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccc-cChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlr-k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
...........+|.|+..+--...+.+. ..++.|.+.-. .++ .-...+++.++..++.+|+||+.+
T Consensus 97 --------~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~---~N~-~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 97 --------MFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFT---INT-RGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp --------HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH---HHT-HHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred --------HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH---Hhh-HHHHHHHHHHHHHHhcCCeEEEEe
Confidence 0000001124689888855332222221 12233332111 111 122446667777777789999864
No 469
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=41.44 E-value=2.1e+02 Score=28.81 Aligned_cols=137 Identities=10% Similarity=-0.032 Sum_probs=71.7
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC-CCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC-TANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg-~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
|.+||=.+ |.|+....++..+.... ...-.|+..+.+..++..+...+.... ...+.+...|..+...+.-
T Consensus 33 ~k~~lVTG-as~GIG~aia~~l~~~G----~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~--- 104 (287)
T 3rku_A 33 KKTVLITG-ASAGIGKATALEYLEAS----NGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKP--- 104 (287)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHHH----TTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHH---
T ss_pred CCEEEEec-CCChHHHHHHHHHHHcC----CCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHH---
Confidence 55666555 56777778877764310 001189999999999988888776543 3456677777665322110
Q ss_pred CCCCCccccccccccccccccEEEecCCCCC-CCccc-cChhhhhhcccccccchHHHHHHHHHHHHhhc--cCCCEEEE
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSG-DGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLL--KVGGRIVY 233 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSG-dGtlr-k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lL--KpGGrLVY 233 (732)
...........+|.++..+-... .+.+. ..++.|.+--.-+.. -...+++.++..+ +.+|+||+
T Consensus 105 --------~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~----g~~~l~~~~~~~m~~~~~g~IV~ 172 (287)
T 3rku_A 105 --------FIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVT----ALINITQAVLPIFQAKNSGDIVN 172 (287)
T ss_dssp --------HHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTH----HHHHHHHHHHHHHHHHTCCEEEE
T ss_pred --------HHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCCCeEEE
Confidence 00001112357899988653221 22221 233334331111111 1233455555544 34688887
Q ss_pred Ec
Q 004759 234 ST 235 (732)
Q Consensus 234 ST 235 (732)
.+
T Consensus 173 is 174 (287)
T 3rku_A 173 LG 174 (287)
T ss_dssp EC
T ss_pred EC
Confidence 53
No 470
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=41.29 E-value=87 Score=34.49 Aligned_cols=119 Identities=18% Similarity=0.097 Sum_probs=69.3
Q ss_pred ecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHH------------HHc-CCCceEEEecccccCCC
Q 004759 85 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQT------------KRM-CTANLIVTNHEAQHFPG 151 (732)
Q Consensus 85 mCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~------------kRl-g~~ni~Vt~~Da~~fp~ 151 (732)
..-|.|+..+.+|..|... .-.|+++|++++++..|.... ++. ...++.++.. .
T Consensus 12 ~vIGlG~vG~~~A~~La~~-------G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd-~----- 78 (446)
T 4a7p_A 12 AMIGTGYVGLVSGACFSDF-------GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTD-L----- 78 (446)
T ss_dssp EEECCSHHHHHHHHHHHHT-------TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESC-H-----
T ss_pred EEEcCCHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECC-H-----
Confidence 4458899988888887652 247999999999998775420 000 0012222210 0
Q ss_pred CccCCCCCCCCccccccccccccccccEEEecCCCCC---CCccccChhhhhhcccccccchHHHHHHHHHHHHhhccCC
Q 004759 152 CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG---DGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVG 228 (732)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSG---dGtlrk~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpG 228 (732)
...-...|.|++=+|-.. +| .||+ ..+ ...++.....|++|
T Consensus 79 -------------------~ea~~~aDvvii~Vptp~~~~~~----~~Dl------------~~v-~~v~~~i~~~l~~g 122 (446)
T 4a7p_A 79 -------------------AEGVKDADAVFIAVGTPSRRGDG----HADL------------SYV-FAAAREIAENLTKP 122 (446)
T ss_dssp -------------------HHHHTTCSEEEECCCCCBCTTTC----CBCT------------HHH-HHHHHHHHHSCCSC
T ss_pred -------------------HHHHhcCCEEEEEcCCCCccccC----CccH------------HHH-HHHHHHHHHhcCCC
Confidence 000134688888665332 23 2332 111 23445566788998
Q ss_pred CEEEEEcCCCCCcCcHHHHHHHHHH
Q 004759 229 GRIVYSTCSMNPVENEAVVAEILRK 253 (732)
Q Consensus 229 GrLVYSTCSlnp~ENEaVV~~~L~~ 253 (732)
..+|+.+ |+.|.-.+.+...+.+.
T Consensus 123 ~iVV~~S-Tv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 123 SVIVTKS-TVPVGTGDEVERIIAEV 146 (446)
T ss_dssp CEEEECS-CCCTTHHHHHHHHHHHH
T ss_pred CEEEEeC-CCCchHHHHHHHHHHHh
Confidence 7777754 78888888886655554
No 471
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=40.93 E-value=78 Score=31.16 Aligned_cols=59 Identities=7% Similarity=0.128 Sum_probs=39.8
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~-~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+...+++..|... ...|++.+.+..+...+...+ +. .++.+...|..+
T Consensus 16 ~k~vl-ITGasggiG~~~a~~l~~~-------G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~ 75 (278)
T 2bgk_A 16 DKVAI-ITGGAGGIGETTAKLFVRY-------GAKVVIADIADDHGQKVCNNI---GSPDVISFVHCDVTK 75 (278)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHH---CCTTTEEEEECCTTC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHC-------CCEEEEEcCChhHHHHHHHHh---CCCCceEEEECCCCC
Confidence 55677 4456788888998888753 357999999988766554433 22 256667777654
No 472
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=40.65 E-value=91 Score=30.13 Aligned_cols=61 Identities=7% Similarity=0.007 Sum_probs=42.9
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCC-HHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLD-VQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid-~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+...+++..|... ...|++.+.+ ..++..+...++..+ .++.+...|..+
T Consensus 7 ~k~vl-VTGasggiG~~~a~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 68 (258)
T 3afn_B 7 GKRVL-ITGSSQGIGLATARLFARA-------GAKVGLHGRKAPANIDETIASMRADG-GDAAFFAADLAT 68 (258)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT-------TCEEEEEESSCCTTHHHHHHHHHHTT-CEEEEEECCTTS
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHC-------CCEEEEECCCchhhHHHHHHHHHhcC-CceEEEECCCCC
Confidence 55676 5556788888998888753 3579999998 777777766665554 356666677654
No 473
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=40.52 E-value=1.3e+02 Score=29.31 Aligned_cols=61 Identities=10% Similarity=0.130 Sum_probs=42.1
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi-d~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+...+++..|... ...|++++. +..++..+...++..+ ..+.+...|..+
T Consensus 7 ~k~vl-ITGasggiG~~~a~~l~~~-------G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~ 68 (261)
T 1gee_A 7 GKVVV-ITGSSTGLGKSMAIRFATE-------KAKVVVNYRSKEDEANSVLEEIKKVG-GEAIAVKGDVTV 68 (261)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTS
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHC-------CCEEEEEcCCChHHHHHHHHHHHhcC-CceEEEECCCCC
Confidence 45566 4556788888888887652 357999999 8888877777666554 345666666554
No 474
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=40.41 E-value=1.1e+02 Score=30.24 Aligned_cols=61 Identities=5% Similarity=0.051 Sum_probs=41.7
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEE-eCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIAN-DLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAn-Did~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+....++..|... ...|+.. +.+..++..+...++..+. .+.+...|..+
T Consensus 4 ~k~vl-VTGas~gIG~aia~~l~~~-------G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 65 (258)
T 3oid_A 4 NKCAL-VTGSSRGVGKAAAIRLAEN-------GYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQ 65 (258)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCEEE-EecCCchHHHHHHHHHHHC-------CCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 44555 4556688888888888752 3466665 8899888888877766553 46666677654
No 475
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=40.35 E-value=30 Score=36.33 Aligned_cols=52 Identities=23% Similarity=0.327 Sum_probs=36.2
Q ss_pred cCCCCCCEEEeecCCC-ChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCc
Q 004759 74 LDVQPDHFVLDMCAAP-GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 138 (732)
Q Consensus 74 Ld~~pg~~VLDmCAAP-GsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~n 138 (732)
.++++|++||=.+||+ |..++|+|..+. ...|++.|.+.+|++.++ .+|...
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~---------Ga~Vi~~~~~~~~~~~~~----~lGa~~ 234 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMT---------PATVIALDVKEEKLKLAE----RLGADH 234 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHC---------CCEEEEEESSHHHHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC---------CCeEEEEeCCHHHHHHHH----HhCCCE
Confidence 5789999999998742 223455555441 147999999999988764 577643
No 476
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=39.93 E-value=1.5e+02 Score=29.13 Aligned_cols=61 Identities=7% Similarity=0.091 Sum_probs=41.9
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHc-CCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-CTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRl-g~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+....++..|... ...|++.+.+..++..+...+... + .++.+...|..+
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~ 68 (263)
T 3ai3_A 7 GKVAV-ITGSSSGIGLAIAEGFAKE-------GAHIVLVARQVDRLHEAARSLKEKFG-VRVLEVAVDVAT 68 (263)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTS
T ss_pred CCEEE-EECCCchHHHHHHHHHHHC-------CCEEEEEcCCHHHHHHHHHHHHHhcC-CceEEEEcCCCC
Confidence 45566 4556688888888888752 358999999998887776666543 4 345666666554
No 477
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=39.88 E-value=1e+02 Score=29.47 Aligned_cols=57 Identities=14% Similarity=0.066 Sum_probs=38.0
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+...+++..|... .-.|++.+.+..++..+... ++ ++.+...|..+
T Consensus 5 ~k~vl-VtGasggiG~~~a~~l~~~-------G~~V~~~~r~~~~~~~~~~~---~~--~~~~~~~D~~~ 61 (234)
T 2ehd_A 5 KGAVL-ITGASRGIGEATARLLHAK-------GYRVGLMARDEKRLQALAAE---LE--GALPLPGDVRE 61 (234)
T ss_dssp CCEEE-ESSTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHH---ST--TCEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHH---hh--hceEEEecCCC
Confidence 34455 5567788889999888752 35799999998877655443 22 45555666554
No 478
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=39.62 E-value=1.6e+02 Score=29.17 Aligned_cols=61 Identities=7% Similarity=0.042 Sum_probs=41.1
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC-------------CHHHHHHHHHHHHHcCCCceEEEecc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-------------DVQRCNLLIHQTKRMCTANLIVTNHE 145 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi-------------d~~Rl~~L~~n~kRlg~~ni~Vt~~D 145 (732)
|.+||= .-|.|+....++..|... ...|+++|. +..++..+...+...+ ..+.+...|
T Consensus 11 ~k~~lV-TGas~GIG~a~a~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D 81 (277)
T 3tsc_A 11 GRVAFI-TGAARGQGRAHAVRMAAE-------GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN-RRIVAAVVD 81 (277)
T ss_dssp TCEEEE-ESTTSHHHHHHHHHHHHT-------TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECC
T ss_pred CCEEEE-ECCccHHHHHHHHHHHHc-------CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-CeEEEEECC
Confidence 556664 445677788888877653 458999998 6777777776666655 346666666
Q ss_pred ccc
Q 004759 146 AQH 148 (732)
Q Consensus 146 a~~ 148 (732)
..+
T Consensus 82 ~~~ 84 (277)
T 3tsc_A 82 TRD 84 (277)
T ss_dssp TTC
T ss_pred CCC
Confidence 654
No 479
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=39.47 E-value=1.6e+02 Score=28.84 Aligned_cols=130 Identities=9% Similarity=0.005 Sum_probs=68.2
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNF 158 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~ 158 (732)
+.+||= .-|.|+...+++..|... ...|+..|.+..++..+...+ + ..+.+...|..+...+.-
T Consensus 8 ~k~vlV-TGas~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~---- 71 (259)
T 4e6p_A 8 GKSALI-TGSARGIGRAFAEAYVRE-------GATVAIADIDIERARQAAAEI---G-PAAYAVQMDVTRQDSIDA---- 71 (259)
T ss_dssp TCEEEE-ETCSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHH----
T ss_pred CCEEEE-ECCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHh---C-CCceEEEeeCCCHHHHHH----
Confidence 556664 456688888888888753 358999999998877665543 3 345566666554211100
Q ss_pred CCCCccccccccccccccccEEEecCCCCCCCccc-cChhhhhhcccccccchHHHHHHHHHHHHhhcc---CCCEEEEE
Q 004759 159 SSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK---VGGRIVYS 234 (732)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlr-k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLK---pGGrLVYS 234 (732)
...........+|.++..+--...+.+. ..++.|.+--.-+. .-...+++.++..++ .+|+||+.
T Consensus 72 -------~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~----~g~~~~~~~~~~~~~~~~~~g~iv~i 140 (259)
T 4e6p_A 72 -------AIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINV----AGTLFTLQAAARQMIAQGRGGKIINM 140 (259)
T ss_dssp -------HHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred -------HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHh----HHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 0000011224789999866443333322 12333432111111 112334455555443 27888875
Q ss_pred c
Q 004759 235 T 235 (732)
Q Consensus 235 T 235 (732)
+
T Consensus 141 s 141 (259)
T 4e6p_A 141 A 141 (259)
T ss_dssp C
T ss_pred C
Confidence 3
No 480
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=39.14 E-value=1.6e+02 Score=30.21 Aligned_cols=132 Identities=11% Similarity=0.104 Sum_probs=69.6
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCC------------HHHHHHHHHHHHHcCCCceEEEeccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLD------------VQRCNLLIHQTKRMCTANLIVTNHEA 146 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid------------~~Rl~~L~~n~kRlg~~ni~Vt~~Da 146 (732)
|.+|| +.-|.|+....++..|... ...|+++|.+ ..++..+...+...+ ..+.+...|.
T Consensus 46 gk~~l-VTGas~GIG~aia~~la~~-------G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv 116 (317)
T 3oec_A 46 GKVAF-ITGAARGQGRTHAVRLAQD-------GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG-RRIIARQADV 116 (317)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHT-------TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCT
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC-------CCeEEEEecccccccccccccCHHHHHHHHHHHHhcC-CeEEEEECCC
Confidence 55555 5556678888888887653 4588999876 677776666666655 3466666666
Q ss_pred ccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCccc-cChhhhhhcccccccchHHHHHHHHHHHHhhc
Q 004759 147 QHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLL 225 (732)
Q Consensus 147 ~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlr-k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lL 225 (732)
.+...+. . ...........+|.++..+--+..+.+. ..++-|.+--.-+.. -...+++.++..+
T Consensus 117 ~d~~~v~--~---------~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~----g~~~l~~~~~~~m 181 (317)
T 3oec_A 117 RDLASLQ--A---------VVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLI----GAWHACRAVLPSM 181 (317)
T ss_dssp TCHHHHH--H---------HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTH----HHHHHHHHHHHHH
T ss_pred CCHHHHH--H---------HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH----HHHHHHHHHHHHH
Confidence 5422110 0 0000011224789998866444433322 223334321111111 1223445555544
Q ss_pred ---cCCCEEEEE
Q 004759 226 ---KVGGRIVYS 234 (732)
Q Consensus 226 ---KpGGrLVYS 234 (732)
+.+|+||+.
T Consensus 182 ~~~~~~g~Iv~i 193 (317)
T 3oec_A 182 IERGQGGSVIFV 193 (317)
T ss_dssp HHTCSCEEEEEE
T ss_pred HHcCCCCEEEEE
Confidence 236888875
No 481
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=38.94 E-value=64 Score=31.95 Aligned_cols=133 Identities=10% Similarity=0.054 Sum_probs=71.3
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEE-eCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIAN-DLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAn-Did~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
|.+||= .-|.|+....++..|... ...|+.. +.+..+...+...++..+. .+.+...|..+...+. .
T Consensus 8 ~k~vlV-TGas~GIG~aia~~la~~-------G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~--~- 75 (259)
T 3edm_A 8 NRTIVV-AGAGRDIGRACAIRFAQE-------GANVVLTYNGAAEGAATAVAEIEKLGR-SALAIKADLTNAAEVE--A- 75 (259)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHT-------TCEEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCTTCHHHHH--H-
T ss_pred CCEEEE-ECCCchHHHHHHHHHHHC-------CCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHH--H-
Confidence 556664 446677788888887652 3466666 7788888777777765553 4556666655421110 0
Q ss_pred CCCCCccccccccccccccccEEEecCCCC-CCCccc-cChhhhhhcccccccchHHHHHHHHHHHHhhccCCCEEEEEc
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCS-GDGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 235 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCS-GdGtlr-k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKpGGrLVYST 235 (732)
............|.++..+--. ..+.+. ..++.|.+- -..++ .-...+++.++..++.+|+||+.+
T Consensus 76 --------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~---~~vN~-~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 76 --------AISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQV---LDVNL-TSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp --------HHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHH---HHHHT-HHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred --------HHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHH---HHHHH-HHHHHHHHHHHHHHhcCCEEEEEc
Confidence 0000011124688888755211 112221 223334321 11111 123456777888888889999864
No 482
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=38.92 E-value=94 Score=31.07 Aligned_cols=62 Identities=8% Similarity=0.082 Sum_probs=42.9
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
|.+||=. -|.|+....++..|... ...|+..+.+..++..+...+....-..+.+...|..+
T Consensus 27 ~k~~lVT-Gas~GIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 88 (277)
T 4fc7_A 27 DKVAFIT-GGGSGIGFRIAEIFMRH-------GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA 88 (277)
T ss_dssp TCEEEEE-TTTSHHHHHHHHHHHTT-------TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC
T ss_pred CCEEEEe-CCCchHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC
Confidence 5566644 45678888888888752 35899999999988777776654322456666677654
No 483
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=38.87 E-value=1.1e+02 Score=27.21 Aligned_cols=52 Identities=15% Similarity=0.011 Sum_probs=36.4
Q ss_pred EEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 81 FVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 81 ~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+|+=+ |-|.....+++.|... .-.|+++|.+++++..+.. .| +.+..+|+..
T Consensus 9 ~viIi--G~G~~G~~la~~L~~~-------g~~v~vid~~~~~~~~~~~----~g---~~~i~gd~~~ 60 (140)
T 3fwz_A 9 HALLV--GYGRVGSLLGEKLLAS-------DIPLVVIETSRTRVDELRE----RG---VRAVLGNAAN 60 (140)
T ss_dssp CEEEE--CCSHHHHHHHHHHHHT-------TCCEEEEESCHHHHHHHHH----TT---CEEEESCTTS
T ss_pred CEEEE--CcCHHHHHHHHHHHHC-------CCCEEEEECCHHHHHHHHH----cC---CCEEECCCCC
Confidence 44433 4588888888888752 3479999999999886653 33 4566677654
No 484
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=38.86 E-value=1.7e+02 Score=28.86 Aligned_cols=62 Identities=10% Similarity=0.013 Sum_probs=42.4
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcC-CCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC-TANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg-~~ni~Vt~~Da~~ 148 (732)
+..||=. -|.|+....++..|... ...|++++.+..++..+...+.... ..++.+...|..+
T Consensus 13 ~k~vlVT-Gas~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 75 (267)
T 1iy8_A 13 DRVVLIT-GGGSGLGRATAVRLAAE-------GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 75 (267)
T ss_dssp TCEEEEE-TTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS
T ss_pred CCEEEEE-CCCCHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCC
Confidence 4556644 45688888888888752 3589999999998887777665541 2346666666554
No 485
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=38.82 E-value=1.7e+02 Score=28.55 Aligned_cols=61 Identities=8% Similarity=0.083 Sum_probs=42.0
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+....++..|... ...|++.+.+..++..+...+...+. .+.+...|..+
T Consensus 14 ~k~vl-VTGas~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 74 (260)
T 2zat_A 14 NKVAL-VTASTDGIGLAIARRLAQD-------GAHVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGK 74 (260)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCC
Confidence 45566 4556788888888888753 35899999999888777766665543 45555566543
No 486
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=38.77 E-value=1.6e+02 Score=29.55 Aligned_cols=61 Identities=15% Similarity=0.059 Sum_probs=42.7
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEe-CCHHHHHHHHHHHH-HcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIAND-LDVQRCNLLIHQTK-RMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnD-id~~Rl~~L~~n~k-Rlg~~ni~Vt~~Da~~ 148 (732)
+..|| +.-|.|+....++..|... ...|++++ .+..++..+...+. ..+ .++.+...|..+
T Consensus 9 ~k~~l-VTGas~GIG~aia~~la~~-------G~~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~ 71 (291)
T 1e7w_A 9 VPVAL-VTGAAKRLGRSIAEGLHAE-------GYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSN 71 (291)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSS
T ss_pred CCEEE-EECCCchHHHHHHHHHHHC-------CCeEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCC
Confidence 44555 4556678888888888652 35799999 99998888777665 444 356666677655
No 487
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=38.74 E-value=19 Score=37.76 Aligned_cols=36 Identities=28% Similarity=0.501 Sum_probs=28.0
Q ss_pred HHHHHHHHhhccCCCEEEEEcCCCCCcCcHHHHHHHHHH
Q 004759 215 VQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 253 (732)
Q Consensus 215 ~~IL~rAl~lLKpGGrLVYSTCSlnp~ENEaVV~~~L~~ 253 (732)
.+.|..|..+|+|||||+.- |++..|+- +|..+++.
T Consensus 213 ~~~L~~a~~~L~~gGrl~vi--sfHSLEDR-iVK~~~~~ 248 (285)
T 1wg8_A 213 KEFLEQAAEVLAPGGRLVVI--AFHSLEDR-VVKRFLRE 248 (285)
T ss_dssp HHHHHHHHHHEEEEEEEEEE--ECSHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEE--ecCcHHHH-HHHHHHHh
Confidence 46788999999999999864 67766764 55777775
No 488
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=38.60 E-value=1.7e+02 Score=29.03 Aligned_cols=133 Identities=11% Similarity=0.048 Sum_probs=71.2
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKN 157 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDi-d~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~ 157 (732)
+..|| +.-|.|+....++..|... ...|+..+. +..++..+...++..+. .+.+...|..+...+.-
T Consensus 28 ~k~vl-VTGas~gIG~aia~~la~~-------G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~--- 95 (269)
T 4dmm_A 28 DRIAL-VTGASRGIGRAIALELAAA-------GAKVAVNYASSAGAADEVVAAIAAAGG-EAFAVKADVSQESEVEA--- 95 (269)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHH---
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHC-------CCEEEEEeCCChHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHH---
Confidence 44555 4556678888888887652 357888887 78888888777776653 45666666654221100
Q ss_pred CCCCCccccccccccccccccEEEecCCCCCCCccc-cChhhhhhcccccccchHHHHHHHHHHHHhhc--cCCCEEEEE
Q 004759 158 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLL--KVGGRIVYS 234 (732)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlr-k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lL--KpGGrLVYS 234 (732)
............|.++..+--+..+.+. ..++-|.+--.-+ + .-...+++.++..+ +.+|+||+.
T Consensus 96 --------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN---~-~g~~~l~~~~~~~~~~~~~g~iv~i 163 (269)
T 4dmm_A 96 --------LFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLN---L-GGVFLCSRAAAKIMLKQRSGRIINI 163 (269)
T ss_dssp --------HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---T-HHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred --------HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH---h-HHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 0000011124689999876544433332 2233343211111 1 11233444555544 346888876
Q ss_pred c
Q 004759 235 T 235 (732)
Q Consensus 235 T 235 (732)
+
T Consensus 164 s 164 (269)
T 4dmm_A 164 A 164 (269)
T ss_dssp C
T ss_pred C
Confidence 4
No 489
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=38.45 E-value=46 Score=33.15 Aligned_cols=131 Identities=12% Similarity=0.071 Sum_probs=67.2
Q ss_pred CCEEEeecC-CCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHH-HHHHHHHHHcCCCceEEEecccccCCCCccCC
Q 004759 79 DHFVLDMCA-APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRC-NLLIHQTKRMCTANLIVTNHEAQHFPGCRANK 156 (732)
Q Consensus 79 g~~VLDmCA-APGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl-~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~ 156 (732)
+.+||=.+| |.|+....++..|... ...|+.+|.+..+. ..+.+ .++ ..+.+...|..+...+. .
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~---~~~-~~~~~~~~Dv~~~~~v~--~ 73 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQ-------GAQLVLTGFDRLRLIQRITD---RLP-AKAPLLELDVQNEEHLA--S 73 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHT-------TCEEEEEECSCHHHHHHHHT---TSS-SCCCEEECCTTCHHHHH--H
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHC-------CCEEEEEecChHHHHHHHHH---hcC-CCceEEEccCCCHHHHH--H
Confidence 567877777 4888888998888753 35799999887652 33322 233 23444555554321110 0
Q ss_pred CCCCCCccccccccccccc---cccEEEecCCCCC-----CCccc-cChhhhhhcccccccchHHHHHHHHHHHHhhccC
Q 004759 157 NFSSASDKGIESESNMGQL---LFDRVLCDVPCSG-----DGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKV 227 (732)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~---~FDrVL~DvPCSG-----dGtlr-k~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKp 227 (732)
.......... .+|.++..+--.. .+.+. ..++.|.+- -..++ .-...+++.++..++.
T Consensus 74 ---------~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~---~~~N~-~g~~~l~~~~~~~~~~ 140 (269)
T 2h7i_A 74 ---------LAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKG---IHISA-YSYASMAKALLPIMNP 140 (269)
T ss_dssp ---------HHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHH---HHHHT-HHHHHHHHHHGGGEEE
T ss_pred ---------HHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHH---HHHhh-HHHHHHHHHHHHhhcc
Confidence 0000001112 6898887553221 11111 122223221 00111 1234567778888888
Q ss_pred CCEEEEEc
Q 004759 228 GGRIVYST 235 (732)
Q Consensus 228 GGrLVYST 235 (732)
+|+||+.+
T Consensus 141 ~g~iv~is 148 (269)
T 2h7i_A 141 GGSIVGMD 148 (269)
T ss_dssp EEEEEEEE
T ss_pred CCeEEEEc
Confidence 89999764
No 490
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=38.27 E-value=1.3e+02 Score=30.23 Aligned_cols=58 Identities=3% Similarity=-0.033 Sum_probs=39.9
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+..|| +.-|.|+....++..|... ...|++.|.+..++..+...+ + .++.+...|..+
T Consensus 28 ~k~~l-VTGas~GIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~d 85 (272)
T 4dyv_A 28 KKIAI-VTGAGSGVGRAVAVALAGA-------GYGVALAGRRLDALQETAAEI---G-DDALCVPTDVTD 85 (272)
T ss_dssp CCEEE-ETTTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHH---T-SCCEEEECCTTS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHh---C-CCeEEEEecCCC
Confidence 44555 5566788888888888653 358999999998887666544 3 345666666554
No 491
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=37.95 E-value=1.7e+02 Score=29.12 Aligned_cols=61 Identities=8% Similarity=-0.044 Sum_probs=43.6
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+..|| +.-|.|+....++..|... ...|++.+.+..++..+...++..+.. +.+...|..+
T Consensus 28 ~k~~l-VTGas~GIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d 88 (270)
T 3ftp_A 28 KQVAI-VTGASRGIGRAIALELARR-------GAMVIGTATTEAGAEGIGAAFKQAGLE-GRGAVLNVND 88 (270)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHHHHHHHHHTCC-CEEEECCTTC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEEeCCC
Confidence 45555 5556788888888887653 358999999999999888888776643 4445556544
No 492
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=37.67 E-value=1.8e+02 Score=28.71 Aligned_cols=61 Identities=10% Similarity=0.032 Sum_probs=43.9
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
|.+||=.+ |.|+....++..|... ...|+..|.+..++..+...+...+. ++.+...|..+
T Consensus 11 ~k~vlVTG-as~gIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 71 (264)
T 3ucx_A 11 DKVVVISG-VGPALGTTLARRCAEQ-------GADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITD 71 (264)
T ss_dssp TCEEEEES-CCTTHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CcEEEEEC-CCcHHHHHHHHHHHHC-------cCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 56666555 5566777888777652 35899999999999988888876653 46666666654
No 493
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=37.56 E-value=1.1e+02 Score=30.56 Aligned_cols=130 Identities=8% Similarity=0.136 Sum_probs=68.1
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEecccccCCCCccCCCC
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNF 158 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~fp~~~~~~~~ 158 (732)
+.+|| +.-|.|+....++..|... ...|+..|.+..++..+... ++ ..+.+...|..+...+. .
T Consensus 27 ~k~vl-VTGas~GIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~Dv~d~~~v~--~-- 90 (277)
T 4dqx_A 27 QRVCI-VTGGGSGIGRATAELFAKN-------GAYVVVADVNEDAAVRVANE---IG-SKAFGVRVDVSSAKDAE--S-- 90 (277)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHHHHH---HC-TTEEEEECCTTCHHHHH--H--
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHH---hC-CceEEEEecCCCHHHHH--H--
Confidence 45565 4445677888888887653 35899999999887766554 33 24555666655421110 0
Q ss_pred CCCCccccccccccccccccEEEecCCCCCCCcccc-ChhhhhhcccccccchHHHHHHHHHHHHhhccC--CCEEEEEc
Q 004759 159 SSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRK-APDIWRKWNVGLGNGLHSLQVQIAMRGISLLKV--GGRIVYST 235 (732)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGtlrk-~pd~w~~ws~~~~~~L~~lQ~~IL~rAl~lLKp--GGrLVYST 235 (732)
...........+|.++..+--...+.+.. .++.|.+--.- ++ .-...+++.++..++. +|+||+.+
T Consensus 91 -------~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v---N~-~g~~~~~~~~~~~~~~~~~g~iv~is 159 (277)
T 4dqx_A 91 -------MVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSV---NV-KGIFLCSKYVIPVMRRNGGGSIINTT 159 (277)
T ss_dssp -------HHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHH---HT-HHHHHHHHHHHHHHTTTTCEEEEEEC
T ss_pred -------HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHH---hh-HHHHHHHHHHHHHHHHcCCcEEEEEC
Confidence 00000111246899888654333333222 23334321111 11 1223455566666644 57888764
No 494
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=37.35 E-value=1.2e+02 Score=29.75 Aligned_cols=61 Identities=3% Similarity=0.108 Sum_probs=42.5
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
|.+|| +.-|.|+....++..|... ...|+..|.+..++..+...+...+ ..+.+...|..+
T Consensus 6 ~k~vl-VTGas~gIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~ 66 (257)
T 3imf_A 6 EKVVI-ITGGSSGMGKGMATRFAKE-------GARVVITGRTKEKLEEAKLEIEQFP-GQILTVQMDVRN 66 (257)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHCCST-TCEEEEECCTTC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCC
Confidence 44555 4556678888888888753 3579999999999888777665443 346666666654
No 495
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=37.34 E-value=2.1e+02 Score=28.78 Aligned_cols=61 Identities=10% Similarity=0.076 Sum_probs=41.8
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCC------------HHHHHHHHHHHHHcCCCceEEEeccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLD------------VQRCNLLIHQTKRMCTANLIVTNHEA 146 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid------------~~Rl~~L~~n~kRlg~~ni~Vt~~Da 146 (732)
|..||=.+ |.|+....++..|... ...|+++|.+ ..++..+...+...+ .++.+...|.
T Consensus 28 gk~~lVTG-as~GIG~aia~~la~~-------G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv 98 (299)
T 3t7c_A 28 GKVAFITG-AARGQGRSHAITLARE-------GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-RRIIASQVDV 98 (299)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHT-------TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCT
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHC-------CCEEEEEecccccccccccccCHHHHHHHHHHHHhcC-CceEEEECCC
Confidence 55666444 5577788888877653 4589999987 777777777776665 3566667776
Q ss_pred cc
Q 004759 147 QH 148 (732)
Q Consensus 147 ~~ 148 (732)
.+
T Consensus 99 ~~ 100 (299)
T 3t7c_A 99 RD 100 (299)
T ss_dssp TC
T ss_pred CC
Confidence 55
No 496
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=37.13 E-value=1.9e+02 Score=27.61 Aligned_cols=60 Identities=7% Similarity=0.027 Sum_probs=39.8
Q ss_pred EEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEE-eCCHHHHHHHHHHHHHcCCCceEEEeccccc
Q 004759 81 FVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIAN-DLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 148 (732)
Q Consensus 81 ~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAn-Did~~Rl~~L~~n~kRlg~~ni~Vt~~Da~~ 148 (732)
+|| +.-|.|+...+++..|... ...|++. +.+..++..+...+...+.....+...|..+
T Consensus 3 ~vl-ITGasggiG~~~a~~l~~~-------G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 63 (245)
T 2ph3_A 3 KAL-ITGASRGIGRAIALRLAED-------GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63 (245)
T ss_dssp EEE-ETTTTSHHHHHHHHHHHTT-------TCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTS
T ss_pred EEE-EeCCCchHHHHHHHHHHHC-------CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCC
Confidence 344 4556788999999888752 3478887 8898888877776666554322225566544
No 497
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=36.86 E-value=1.9e+02 Score=28.73 Aligned_cols=133 Identities=12% Similarity=0.121 Sum_probs=69.4
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCC----------------HHHHHHHHHHHHHcCCCceEEE
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLD----------------VQRCNLLIHQTKRMCTANLIVT 142 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid----------------~~Rl~~L~~n~kRlg~~ni~Vt 142 (732)
|..||= .-|.|+....++..|... ...|+++|.+ .+++..+...+...+ ..+.+.
T Consensus 11 ~k~~lV-TGas~gIG~aia~~la~~-------G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 81 (286)
T 3uve_A 11 GKVAFV-TGAARGQGRSHAVRLAQE-------GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-RRIVTA 81 (286)
T ss_dssp TCEEEE-ESTTSHHHHHHHHHHHHT-------TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-CCEEEE
T ss_pred CCEEEE-eCCCchHHHHHHHHHHHC-------CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-CceEEE
Confidence 555664 445577788888887753 4579999887 677776666665444 346666
Q ss_pred ecccccCCCCccCCCCCCCCccccccccccccccccEEEecCCCCCCCc-cc-cChhhhhhcccccccchHHHHHHHHHH
Q 004759 143 NHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT-LR-KAPDIWRKWNVGLGNGLHSLQVQIAMR 220 (732)
Q Consensus 143 ~~Da~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~FDrVL~DvPCSGdGt-lr-k~pd~w~~ws~~~~~~L~~lQ~~IL~r 220 (732)
..|..+...+.- ............|.++..+-....+. +. ..++.|.+--.-+ + .-...+++.
T Consensus 82 ~~Dv~~~~~v~~-----------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N---~-~g~~~~~~~ 146 (286)
T 3uve_A 82 EVDVRDYDALKA-----------AVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDIN---L-AGVWKTVKA 146 (286)
T ss_dssp ECCTTCHHHHHH-----------HHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHH---T-HHHHHHHHH
T ss_pred EcCCCCHHHHHH-----------HHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHh---h-HHHHHHHHH
Confidence 666654221100 00000111246899888654333221 21 1333343211111 1 112345555
Q ss_pred HHhhcc---CCCEEEEEc
Q 004759 221 GISLLK---VGGRIVYST 235 (732)
Q Consensus 221 Al~lLK---pGGrLVYST 235 (732)
++..++ .+|+||+.+
T Consensus 147 ~~~~~~~~~~~g~iv~is 164 (286)
T 3uve_A 147 GVPHMIAGGRGGSIILTS 164 (286)
T ss_dssp HHHHHHHHTSCEEEEEEC
T ss_pred HHHHHHhCCCCcEEEEEC
Confidence 555553 368888864
No 498
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=36.72 E-value=1.7e+02 Score=29.08 Aligned_cols=62 Identities=6% Similarity=-0.003 Sum_probs=42.8
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHcCCC--ceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kRlg~~--ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+....++..|... ...|++++.+..++..+...+...+.. ++.+...|..+
T Consensus 6 ~k~vl-VTGas~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 69 (280)
T 1xkq_A 6 NKTVI-ITGSSNGIGRTTAILFAQE-------GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT 69 (280)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS
T ss_pred CCEEE-EECCCChHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC
Confidence 44555 4456778888888888752 358999999999888777766554431 56666666654
No 499
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=36.59 E-value=1.8e+02 Score=27.82 Aligned_cols=61 Identities=8% Similarity=0.043 Sum_probs=42.0
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCHHHHHHHHHHHHH-cCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR-MCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~~Rl~~L~~n~kR-lg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+...+++..|... ...|++.+.+..++..+...+.. .+ ..+.+...|..+
T Consensus 7 ~~~vl-VtGasggiG~~la~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 68 (248)
T 2pnf_A 7 GKVSL-VTGSTRGIGRAIAEKLASA-------GSTVIITGTSGERAKAVAEEIANKYG-VKAHGVEMNLLS 68 (248)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHHHHHHHHHHC-CCEEEEECCTTC
T ss_pred CCEEE-EECCCchHHHHHHHHHHHC-------CCEEEEEeCChHHHHHHHHHHHhhcC-CceEEEEccCCC
Confidence 44555 5556788899998888752 35899999999888877666544 33 345666666544
No 500
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=36.49 E-value=2.6e+02 Score=27.81 Aligned_cols=61 Identities=10% Similarity=0.067 Sum_probs=40.9
Q ss_pred CCEEEeecCCCChHHHHHHHHHhcCCCCCCCCCeEEEEEeCCH-HHHHHHHHHHH-HcCCCceEEEeccccc
Q 004759 79 DHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDV-QRCNLLIHQTK-RMCTANLIVTNHEAQH 148 (732)
Q Consensus 79 g~~VLDmCAAPGsKT~qLae~l~~~~~~~~~p~G~VvAnDid~-~Rl~~L~~n~k-Rlg~~ni~Vt~~Da~~ 148 (732)
+.+|| +.-|.|+....++..|... ...|++++.+. .++..+...+. ..+ ..+.+...|..+
T Consensus 23 ~k~~l-VTGas~gIG~aia~~L~~~-------G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~ 85 (288)
T 2x9g_A 23 APAAV-VTGAAKRIGRAIAVKLHQT-------GYRVVIHYHNSAEAAVSLADELNKERS-NTAVVCQADLTN 85 (288)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHH-------TCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSC
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHC-------CCeEEEEeCCchHHHHHHHHHHHhhcC-CceEEEEeecCC
Confidence 44555 4456678888888877652 35799999988 77777766665 333 356666666654
Done!