BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>004764
MITSSSFNLEATLLTTTKLVHYLPLEPPPLLHGIKCCTIFSPPPLVNKLTHSSRIYASIV
NGNGNGDNGKNRKEDEDEQRKVHCEVEVVSWRERRIKAEMLVNADVDSVWNALTDYERLA
DFVPNLACSGRIPCPYPGRIWLEQRGLQRALYWHIEARVVLDLQELIHSASDRELYFSMV
DGDFKKFEGKWSIKSGTRSSTTTLSYEVNVIPRLNFPAIFLERIIRSDLPVNLQALACRA
ERSFGWNQKIPMIKNSFGELSLPILASPSLDFDGGLPEKGKAPHGEFNENIVSSNFGSVP
PSSSDLNSKWGVFGQVCRLDRPCFVDEVHLRRFDGLLENGGVHRCVVASITVKAPVSEVW
NVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEI
SFEQVEGDFDSFQGKWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLC
AIRDYVEKREGDNSLANDSVETTNHTQSSDDLTQSSDELGASSSSDNEDLVDSETPNSFK
QRPRVPGLQTNIEVLKAELLEFISKHGQEGFMPMRKQLRKHGRVDVEKAITRMGGFRRMA
SLMNLALAYKHRKPKGYWDNLENLEEEISRFQRSWGMDPSFMPSRKSFERAGRYDIARAL
EKWGGLHEVSRLLSLKLRHPNRRAHIIKDKKVDYVDPANLECEGKIPSKPYVSQDTQKWA
MKLKDLDINWVE

High Scoring Gene Products

Symbol, full name Information P value
AT5G08720 protein from Arabidopsis thaliana 1.9e-234
AT4G01650 protein from Arabidopsis thaliana 3.2e-17

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  004764
        (732 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504956340 - symbol:AT5G08720 "AT5G08720" speci...  2261  1.9e-234  1
TAIR|locus:2133442 - symbol:AT4G01650 "AT4G01650" species...   221  3.2e-17   1


>TAIR|locus:504956340 [details] [associations]
            symbol:AT5G08720 "AT5G08720" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] Pfam:PF03364 GO:GO:0005739
            EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.530.20
            InterPro:IPR023393 EMBL:AL590346 InterPro:IPR005031 EMBL:BT005959
            EMBL:AK117869 IPI:IPI00531129 RefSeq:NP_680157.1 UniGene:At.45652
            SMR:Q9C5A5 IntAct:Q9C5A5 STRING:Q9C5A5 EnsemblPlants:AT5G08720.1
            GeneID:830772 KEGG:ath:AT5G08720 TAIR:At5g08720 eggNOG:NOG86694
            HOGENOM:HOG000030841 InParanoid:Q9C5A5 OMA:AITRMGG
            ProtClustDB:CLSN2690141 Genevestigator:Q9C5A5 Uniprot:Q9C5A5
        Length = 719

 Score = 2261 (801.0 bits), Expect = 1.9e-234, P = 1.9e-234
 Identities = 447/663 (67%), Positives = 519/663 (78%)

Query:    75 DEDEQRKVHCEVEVVSWRERRIKAEMLVNADVDSVWNALTDYERLADFVPNLACSGRIPC 134
             DE  +RKV CEV+V+SWRERRI+ E+ V++D  SVWN LTDYERLADF+PNL  SGRIPC
Sbjct:    78 DERGERKVRCEVDVISWRERRIRGEIWVDSDSQSVWNVLTDYERLADFIPNLVWSGRIPC 137

Query:   135 PYPGRIWLEQRGLQRALYWHIEARVVLDLQELIHSASDRELYFSMVDGDFKKFEGKWSIK 194
             P+PGRIWLEQRGLQRALYWHIEARVVLDL E + S + REL+FSMVDGDFKKFEGKWS+K
Sbjct:   138 PHPGRIWLEQRGLQRALYWHIEARVVLDLHECLDSPNGRELHFSMVDGDFKKFEGKWSVK 197

Query:   195 SGTRSSTTTLSYEVNVIPRLNFPAIFLERIIRSDLPVNLQALACRAERSFGWNQKIPMIK 254
             SG RS  T LSYEVNVIPR NFPAIFLERIIRSDLPVNL+A+A +AE+ +    K  +I+
Sbjct:   198 SGIRSVGTVLSYEVNVIPRFNFPAIFLERIIRSDLPVNLRAVARQAEKIYKDCGKPSIIE 257

Query:   255 NSFGELSLPILASPSLDFDGGLPEKGKAPHGEFNENIXXXXXXXXXXXXXDLNSKWGVFG 314
             +  G +S     S  ++FD    E+  A                      +LN+ WGV+G
Sbjct:   258 DLLGIISSQPAPSNGIEFDSLATERSVA------------SSVGSLAHSNELNNNWGVYG 305

Query:   315 QVCRLDRPCFVDEVHLRRFDGLLENGGVHRCVVASITVKAPVSEVWNVMTAYETLPEIVP 374
             + C+LD+PC VDEVHLRRFDGLLENGGVHRC VASITVKAPV EVW V+T+YE+LPEIVP
Sbjct:   306 KACKLDKPCTVDEVHLRRFDGLLENGGVHRCAVASITVKAPVCEVWKVLTSYESLPEIVP 365

Query:   375 NLAISKILSRENNKVRILQEGCKGLLYMVLHARVVMDICEQHEQEISFEQVEGDFDSFQG 434
             NLAISKILSR+NNKVRILQEGCKGLLYMVLHAR V+D+ E  EQEI FEQVEGDFDS +G
Sbjct:   366 NLAISKILSRDNNKVRILQEGCKGLLYMVLHARAVLDLHEIREQEIRFEQVEGDFDSLEG 425

Query:   435 KWLFEQLGSHHTLLKYSVESKMQKNSLLSEAIMEEVIYEDLPSNLCAIRDYVEKREGDNS 494
             KW+FEQLGSHHTLLKY+VESKM+K+S LSEAIMEEVIYEDLPSNLCAIRDY+EKR G+ S
Sbjct:   426 KWIFEQLGSHHTLLKYTVESKMRKDSFLSEAIMEEVIYEDLPSNLCAIRDYIEKR-GEKS 484

Query:   495 LANDSVETTNHXXXXXXXXXXXXXXXXXXXXDNEDLVDSETPNSFKQRPRVPGLQTNIEV 554
               +  +ET                       +N+D  D +T    KQR R+PGLQ +IEV
Sbjct:   485 SESCKLETCQ---VSEETCSSSRAKSVETVYNNDDGSD-QT----KQRRRIPGLQRDIEV 536

Query:   555 LKAELLEFISKHGQEGFMPMRKQLRKHGRVDVEKAITRMGGFRRMASLMNLALAYKHRKP 614
             LK+E+L+FIS+HGQEGFMPMRKQLR HGRVD+EKAITRMGGFRR+A +MNL+LAYKHRKP
Sbjct:   537 LKSEILKFISEHGQEGFMPMRKQLRLHGRVDIEKAITRMGGFRRIALMMNLSLAYKHRKP 596

Query:   615 KGYWDNLENLEEEISRFQRSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEVSRLLS 674
             KGYWDNLENL+EEI RFQ+SWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEVSRLL+
Sbjct:   597 KGYWDNLENLQEEIGRFQQSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEVSRLLA 656

Query:   675 LKLRHPNRRAHIIKDK-----KVDYVDPANLECEGKIPSKPYVSQDTQKWAMKLKDLDIN 729
             L +RHPNR+ +  KD      + +  + A+L       +KPYVSQDT+KW   LKDLDIN
Sbjct:   657 LNVRHPNRQLNSRKDNGNTILRTESTE-ADLNSTVNKNNKPYVSQDTEKWLYNLKDLDIN 715

Query:   730 WVE 732
             WV+
Sbjct:   716 WVQ 718


>TAIR|locus:2133442 [details] [associations]
            symbol:AT4G01650 "AT4G01650" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009507 "chloroplast" evidence=ISM;IDA]
            Pfam:PF03364 GO:GO:0009507 EMBL:CP002687 Gene3D:3.30.530.20
            InterPro:IPR023393 EMBL:AL161492 InterPro:IPR005031 IPI:IPI00525114
            PIR:C85021 RefSeq:NP_192074.1 UniGene:At.34395
            ProteinModelPortal:Q9M120 STRING:Q9M120 PRIDE:Q9M120
            EnsemblPlants:AT4G01650.1 GeneID:828138 KEGG:ath:AT4G01650
            TAIR:At4g01650 InParanoid:Q9M120 OMA:SKIGMEA PhylomeDB:Q9M120
            ProtClustDB:CLSN2685516 ArrayExpress:Q9M120 Genevestigator:Q9M120
            Uniprot:Q9M120
        Length = 288

 Score = 221 (82.9 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 60/175 (34%), Positives = 94/175 (53%)

Query:    85 EVEVVSWRERRIKAEMLVNADVDSVWNALTDYERLADFVPNLACSGRIPCPYPGRIWLEQ 144
             E++ +    RRI++++ + A +DSVW+ LTDYE+L+DF+P L  S  +      R+ L Q
Sbjct:   106 ELKKLEKSSRRIRSKIGMEASLDSVWSVLTDYEKLSDFIPGLVVSELVE-KEGNRVRLFQ 164

Query:   145 RGLQR-ALYWHIEARVVLDLQE----LIHSASDRELYFSMVDGDFKKFEGKWSIKS---G 196
              G Q  AL     A+ VLD  E    ++     RE+ F MV+GDF+ FEGKWSI+    G
Sbjct:   165 MGQQNLALGLKFNAKAVLDCYEKELEVLPHGRRREIDFKMVEGDFQLFEGKWSIEQLDKG 224

Query:   197 TRSST---------TTLSYEVNVIPRLNFPAIFLERIIRSDLPVNLQALACRAER 242
                           TTL+Y V+V P++  P   +E  +  ++  NL ++   A++
Sbjct:   225 IHGEALDLQFKDFRTTLAYTVDVKPKMWLPVRLVEGRLCKEIRTNLMSIRDAAQK 279

 Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
 Identities = 43/112 (38%), Positives = 68/112 (60%)

Query:   344 RCVVASITVKAPVSEVWNVMTAYETLPEIVPNLAISKILSRENNKVRILQEGCKGL-LYM 402
             R + + I ++A +  VW+V+T YE L + +P L +S+++ +E N+VR+ Q G + L L +
Sbjct:   115 RRIRSKIGMEASLDSVWSVLTDYEKLSDFIPGLVVSELVEKEGNRVRLFQMGQQNLALGL 174

Query:   403 VLHARVVMDICEQ------H--EQEISFEQVEGDFDSFQGKWLFEQL--GSH 444
               +A+ V+D  E+      H   +EI F+ VEGDF  F+GKW  EQL  G H
Sbjct:   175 KFNAKAVLDCYEKELEVLPHGRRREIDFKMVEGDFQLFEGKWSIEQLDKGIH 226


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      732       679   0.00079  121 3  11 22  0.39    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  626 (67 KB)
  Total size of DFA:  394 KB (2191 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  54.42u 0.16s 54.58t   Elapsed:  00:00:03
  Total cpu time:  54.42u 0.16s 54.58t   Elapsed:  00:00:03
  Start:  Tue May 21 14:35:30 2013   End:  Tue May 21 14:35:33 2013

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