Query 004766
Match_columns 732
No_of_seqs 483 out of 4198
Neff 9.7
Searched_HMMs 46136
Date Thu Mar 28 12:33:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004766.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004766hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1770 PtrB Protease II [Amin 100.0 5E-113 1E-117 890.4 69.2 662 11-728 4-681 (682)
2 KOG2237 Predicted serine prote 100.0 5E-107 1E-111 836.9 52.0 701 10-731 3-711 (712)
3 PRK10115 protease 2; Provision 100.0 2E-102 5E-107 877.9 81.9 665 13-730 2-680 (686)
4 COG1505 Serine proteases of th 100.0 5.7E-98 1E-102 767.0 51.3 635 31-727 2-648 (648)
5 PF02897 Peptidase_S9_N: Proly 100.0 2.5E-54 5.5E-59 469.8 51.4 404 13-438 1-413 (414)
6 COG1506 DAP2 Dipeptidyl aminop 100.0 7.4E-46 1.6E-50 417.3 56.7 530 134-728 62-619 (620)
7 KOG2281 Dipeptidyl aminopeptid 100.0 8E-34 1.7E-38 292.3 38.8 334 361-724 516-866 (867)
8 PF00326 Peptidase_S9: Prolyl 100.0 4.4E-34 9.5E-39 281.3 19.0 209 497-728 1-212 (213)
9 KOG2100 Dipeptidyl aminopeptid 100.0 4.1E-30 8.9E-35 291.0 52.8 386 309-729 347-751 (755)
10 PRK13604 luxD acyl transferase 99.9 1.5E-20 3.3E-25 187.6 21.4 223 450-708 8-249 (307)
11 PLN02442 S-formylglutathione h 99.9 1.4E-20 3E-25 192.5 20.8 246 450-727 17-282 (283)
12 TIGR02821 fghA_ester_D S-formy 99.9 4.2E-20 9.2E-25 188.6 22.7 246 450-726 12-275 (275)
13 TIGR02800 propeller_TolB tol-p 99.9 9.5E-20 2.1E-24 199.1 26.2 295 53-400 118-415 (417)
14 PRK10566 esterase; Provisional 99.9 3.3E-20 7.1E-25 187.6 20.3 229 464-726 11-249 (249)
15 PRK01029 tolB translocation pr 99.8 1.7E-18 3.7E-23 187.0 30.5 285 72-403 128-424 (428)
16 PRK04792 tolB translocation pr 99.8 2.2E-18 4.8E-23 187.7 30.3 260 91-403 183-446 (448)
17 PF05448 AXE1: Acetyl xylan es 99.8 7.7E-20 1.7E-24 187.6 15.6 243 447-725 52-320 (320)
18 COG3458 Acetyl esterase (deace 99.8 1.6E-19 3.5E-24 169.7 15.6 231 445-707 50-304 (321)
19 PLN02298 hydrolase, alpha/beta 99.8 1.8E-18 3.8E-23 182.5 25.4 265 445-730 26-322 (330)
20 PRK03629 tolB translocation pr 99.8 7.9E-18 1.7E-22 182.7 30.5 260 91-403 164-427 (429)
21 PRK05137 tolB translocation pr 99.8 6.9E-18 1.5E-22 184.3 30.0 261 90-403 165-432 (435)
22 PRK04043 tolB translocation pr 99.8 6.6E-18 1.4E-22 181.0 28.6 251 93-397 158-415 (419)
23 PRK10162 acetyl esterase; Prov 99.8 3E-18 6.4E-23 178.4 24.8 238 449-727 55-317 (318)
24 PRK02889 tolB translocation pr 99.8 8.9E-18 1.9E-22 182.5 29.5 258 91-403 164-424 (427)
25 PRK05077 frsA fermentation/res 99.8 1.7E-18 3.6E-23 185.8 21.8 237 449-726 166-413 (414)
26 PRK00178 tolB translocation pr 99.8 2.5E-17 5.5E-22 180.2 30.4 262 90-403 162-427 (430)
27 PRK04922 tolB translocation pr 99.8 3.1E-17 6.7E-22 178.9 29.3 262 90-403 167-432 (433)
28 PF01738 DLH: Dienelactone hyd 99.8 7.3E-19 1.6E-23 173.5 14.2 205 465-726 1-218 (218)
29 TIGR01840 esterase_phb esteras 99.8 2E-18 4.4E-23 169.2 16.5 194 467-678 1-197 (212)
30 COG0412 Dienelactone hydrolase 99.8 1.2E-17 2.6E-22 164.5 21.5 216 452-727 3-235 (236)
31 PRK05137 tolB translocation pr 99.8 6.7E-17 1.5E-21 176.5 28.3 245 143-430 165-415 (435)
32 PRK01029 tolB translocation pr 99.8 1.3E-16 2.8E-21 172.4 29.7 260 135-437 140-411 (428)
33 PLN02385 hydrolase; alpha/beta 99.8 8.8E-17 1.9E-21 170.7 23.0 248 449-727 59-347 (349)
34 PHA02857 monoglyceride lipase; 99.8 1.1E-16 2.3E-21 164.6 22.9 232 456-725 5-273 (276)
35 PRK04043 tolB translocation pr 99.8 6.4E-16 1.4E-20 165.8 29.5 239 144-429 155-402 (419)
36 COG1647 Esterase/lipase [Gener 99.8 1.2E-17 2.7E-22 153.1 13.2 214 479-723 13-242 (243)
37 PRK01742 tolB translocation pr 99.7 4.9E-16 1.1E-20 169.1 28.2 258 87-403 165-425 (429)
38 PRK03629 tolB translocation pr 99.7 8.9E-16 1.9E-20 166.6 29.0 242 144-429 164-408 (429)
39 PRK05371 x-prolyl-dipeptidyl a 99.7 2.1E-16 4.6E-21 180.4 24.0 259 442-728 161-522 (767)
40 COG0657 Aes Esterase/lipase [L 99.7 7E-16 1.5E-20 161.1 22.9 228 457-724 57-309 (312)
41 PRK04922 tolB translocation pr 99.7 2E-15 4.3E-20 164.8 27.3 243 143-429 167-413 (433)
42 PRK10749 lysophospholipase L2; 99.7 5.4E-16 1.2E-20 163.1 21.0 255 452-725 31-329 (330)
43 PRK02889 tolB translocation pr 99.7 4.6E-15 1E-19 161.3 27.8 240 144-429 164-405 (427)
44 KOG1455 Lysophospholipase [Lip 99.7 9.7E-16 2.1E-20 148.3 19.8 254 451-725 27-312 (313)
45 PRK11460 putative hydrolase; P 99.7 8.8E-16 1.9E-20 152.2 19.7 186 479-727 14-210 (232)
46 PRK00178 tolB translocation pr 99.7 6.1E-15 1.3E-19 161.4 27.9 251 134-429 154-408 (430)
47 PRK04792 tolB translocation pr 99.7 8.8E-15 1.9E-19 159.5 28.7 242 144-429 183-427 (448)
48 KOG1552 Predicted alpha/beta h 99.7 7.6E-16 1.6E-20 146.2 16.0 219 450-727 34-254 (258)
49 PLN02652 hydrolase; alpha/beta 99.7 3.7E-15 8E-20 158.6 22.8 242 450-728 109-390 (395)
50 PF07859 Abhydrolase_3: alpha/ 99.6 1.4E-15 3E-20 149.5 12.7 185 484-704 1-209 (211)
51 PF10503 Esterase_phd: Esteras 99.6 6.6E-15 1.4E-19 141.5 15.6 195 466-678 2-198 (220)
52 PRK01742 tolB translocation pr 99.6 1E-13 2.2E-18 151.1 26.2 235 143-428 168-405 (429)
53 PF02230 Abhydrolase_2: Phosph 99.6 9.9E-15 2.1E-19 143.5 16.3 190 479-726 12-216 (216)
54 COG2267 PldB Lysophospholipase 99.6 3.5E-14 7.6E-19 145.3 20.7 249 452-727 10-296 (298)
55 KOG1515 Arylacetamide deacetyl 99.6 1E-13 2.3E-18 141.3 21.7 245 451-725 63-335 (336)
56 PF02129 Peptidase_S15: X-Pro 99.6 4.6E-15 1E-19 151.4 12.0 213 460-703 1-271 (272)
57 PF00930 DPPIV_N: Dipeptidyl p 99.6 1.1E-12 2.5E-17 138.9 30.3 287 105-419 23-353 (353)
58 KOG4391 Predicted alpha/beta h 99.6 1.9E-14 4.1E-19 130.7 14.0 234 447-727 50-284 (300)
59 TIGR02800 propeller_TolB tol-p 99.6 4.5E-13 9.7E-18 146.5 27.1 246 140-429 152-399 (417)
60 TIGR00976 /NonD putative hydro 99.6 3E-14 6.5E-19 159.9 18.0 135 457-601 2-137 (550)
61 PLN02511 hydrolase 99.6 5.7E-14 1.2E-18 150.3 18.1 139 451-597 71-211 (388)
62 PRK10985 putative hydrolase; P 99.6 1.2E-13 2.7E-18 144.7 18.1 240 453-728 33-323 (324)
63 COG0823 TolB Periplasmic compo 99.5 4.2E-13 9E-18 142.8 21.4 245 101-396 169-416 (425)
64 TIGR01607 PST-A Plasmodium sub 99.5 2.1E-13 4.6E-18 142.9 18.9 235 456-723 2-331 (332)
65 TIGR03611 RutD pyrimidine util 99.5 9.4E-14 2E-18 140.7 15.6 206 479-723 11-256 (257)
66 COG0823 TolB Periplasmic compo 99.5 3.9E-13 8.5E-18 143.0 18.5 202 89-337 203-404 (425)
67 PF06500 DUF1100: Alpha/beta h 99.5 2.5E-13 5.4E-18 140.1 16.3 236 448-726 162-410 (411)
68 COG3509 LpqC Poly(3-hydroxybut 99.5 5.2E-13 1.1E-17 128.8 16.4 232 460-726 43-308 (312)
69 TIGR03100 hydr1_PEP hydrolase, 99.5 2.3E-12 5.1E-17 131.5 22.0 245 452-723 3-273 (274)
70 PF00930 DPPIV_N: Dipeptidyl p 99.5 1.1E-11 2.4E-16 131.3 27.6 260 140-437 1-324 (353)
71 PF12695 Abhydrolase_5: Alpha/ 99.5 4E-13 8.8E-18 123.3 14.4 145 483-703 1-145 (145)
72 PRK00870 haloalkane dehalogena 99.5 1.3E-12 2.7E-17 136.1 19.9 129 450-594 20-148 (302)
73 TIGR03343 biphenyl_bphD 2-hydr 99.5 1.6E-13 3.4E-18 141.5 12.3 214 480-723 29-281 (282)
74 COG0400 Predicted esterase [Ge 99.5 1.1E-12 2.4E-17 124.8 16.8 187 478-726 15-206 (207)
75 PF12715 Abhydrolase_7: Abhydr 99.5 2.2E-14 4.8E-19 144.9 5.1 143 446-593 83-257 (390)
76 PLN00021 chlorophyllase 99.5 5.5E-12 1.2E-16 129.7 22.8 207 463-729 37-287 (313)
77 COG2945 Predicted hydrolase of 99.5 1.1E-12 2.3E-17 118.1 13.6 198 452-722 5-204 (210)
78 TIGR02427 protocat_pcaD 3-oxoa 99.5 6.5E-13 1.4E-17 133.7 13.9 203 480-722 12-250 (251)
79 TIGR03056 bchO_mg_che_rel puta 99.5 3.3E-12 7.2E-17 131.3 19.4 207 480-722 27-277 (278)
80 COG0429 Predicted hydrolase of 99.5 3.9E-12 8.5E-17 125.2 18.4 239 455-728 53-343 (345)
81 PRK11071 esterase YqiA; Provis 99.5 2.2E-12 4.8E-17 123.4 16.5 182 482-722 2-188 (190)
82 PRK03592 haloalkane dehalogena 99.4 1.5E-11 3.3E-16 127.5 22.6 228 460-725 15-289 (295)
83 COG4099 Predicted peptidase [G 99.4 1.4E-12 3.1E-17 124.4 13.2 201 459-725 169-385 (387)
84 TIGR01249 pro_imino_pep_1 prol 99.4 4.7E-12 1E-16 131.9 18.3 122 455-595 8-129 (306)
85 PLN02872 triacylglycerol lipas 99.4 1.7E-12 3.6E-17 137.7 14.8 146 446-596 39-197 (395)
86 TIGR01250 pro_imino_pep_2 prol 99.4 4.2E-12 9.1E-17 130.9 17.4 108 480-596 24-131 (288)
87 PLN02824 hydrolase, alpha/beta 99.4 5.2E-12 1.1E-16 131.0 18.0 215 481-724 29-293 (294)
88 PRK10673 acyl-CoA esterase; Pr 99.4 1.1E-11 2.4E-16 125.7 17.2 206 478-724 13-254 (255)
89 PLN02965 Probable pheophorbida 99.4 2.4E-11 5.2E-16 123.1 19.0 213 483-723 5-251 (255)
90 PLN03087 BODYGUARD 1 domain co 99.4 1.4E-11 3E-16 133.0 17.9 126 455-595 179-308 (481)
91 TIGR03101 hydr2_PEP hydrolase, 99.4 9.8E-11 2.1E-15 117.0 22.4 214 454-700 3-243 (266)
92 PRK03204 haloalkane dehalogena 99.4 1.7E-11 3.6E-16 126.3 17.4 103 480-595 33-135 (286)
93 TIGR01738 bioH putative pimelo 99.4 6.8E-12 1.5E-16 125.8 14.1 95 482-595 5-99 (245)
94 TIGR02240 PHA_depoly_arom poly 99.4 2.8E-11 6E-16 124.3 18.8 219 460-725 10-266 (276)
95 PLN02679 hydrolase, alpha/beta 99.3 3.3E-11 7.1E-16 128.3 18.8 216 481-724 88-356 (360)
96 PF08840 BAAT_C: BAAT / Acyl-C 99.3 1.1E-11 2.3E-16 120.8 13.3 166 542-728 3-213 (213)
97 KOG1838 Alpha/beta hydrolase [ 99.3 8.3E-11 1.8E-15 120.5 19.9 221 450-704 92-364 (409)
98 TIGR03695 menH_SHCHC 2-succiny 99.3 4.4E-11 9.5E-16 120.1 17.9 103 482-596 2-105 (251)
99 PRK06489 hypothetical protein; 99.3 4E-11 8.7E-16 127.8 18.3 109 481-594 69-187 (360)
100 KOG4178 Soluble epoxide hydrol 99.3 1.8E-10 3.9E-15 114.0 21.0 119 456-596 26-149 (322)
101 PLN02894 hydrolase, alpha/beta 99.3 1.1E-10 2.3E-15 125.7 21.2 108 479-595 103-210 (402)
102 TIGR01836 PHA_synth_III_C poly 99.3 3.7E-11 7.9E-16 127.6 17.3 110 480-598 62-173 (350)
103 PRK14875 acetoin dehydrogenase 99.3 3.1E-11 6.7E-16 129.8 17.0 103 479-595 129-231 (371)
104 PF12697 Abhydrolase_6: Alpha/ 99.3 1.9E-12 4.1E-17 128.0 6.5 186 484-705 1-218 (228)
105 TIGR01392 homoserO_Ac_trn homo 99.3 5.6E-11 1.2E-15 126.3 16.9 129 460-595 14-161 (351)
106 KOG0271 Notchless-like WD40 re 99.3 9E-10 1.9E-14 108.5 22.8 285 132-475 116-443 (480)
107 KOG0279 G protein beta subunit 99.3 1.3E-09 2.7E-14 103.4 22.9 229 130-414 62-304 (315)
108 PRK00175 metX homoserine O-ace 99.3 9.3E-11 2E-15 125.6 17.7 113 480-595 47-181 (379)
109 PLN02578 hydrolase 99.3 3.9E-10 8.5E-15 119.9 20.6 96 481-594 86-185 (354)
110 PF03583 LIP: Secretory lipase 99.3 2E-10 4.3E-15 117.2 17.3 196 503-729 19-285 (290)
111 PRK07581 hypothetical protein; 99.2 6.9E-11 1.5E-15 125.2 14.1 112 480-594 40-157 (339)
112 PRK10439 enterobactin/ferric e 99.2 6.6E-10 1.4E-14 118.6 21.6 204 451-704 180-392 (411)
113 KOG0318 WD40 repeat stress pro 99.2 2.4E-08 5.2E-13 102.5 31.3 251 130-430 58-353 (603)
114 PRK10349 carboxylesterase BioH 99.2 2.2E-10 4.8E-15 116.2 17.0 94 482-594 14-107 (256)
115 KOG4667 Predicted esterase [Li 99.2 4.5E-10 9.7E-15 102.8 15.5 199 478-710 30-246 (269)
116 PRK08775 homoserine O-acetyltr 99.2 1.9E-10 4.2E-15 121.8 15.1 74 510-595 98-172 (343)
117 TIGR03866 PQQ_ABC_repeats PQQ- 99.2 5.4E-08 1.2E-12 100.9 33.2 243 135-430 34-282 (300)
118 PF00756 Esterase: Putative es 99.2 2.3E-11 5E-16 123.0 7.2 137 461-599 5-153 (251)
119 KOG0293 WD40 repeat-containing 99.2 6.7E-10 1.5E-14 110.3 17.0 232 130-414 268-503 (519)
120 KOG3043 Predicted hydrolase re 99.2 1.9E-10 4E-15 106.5 11.4 185 482-726 40-241 (242)
121 KOG0271 Notchless-like WD40 re 99.2 3E-09 6.5E-14 104.8 20.2 258 118-409 139-467 (480)
122 PF14583 Pectate_lyase22: Olig 99.2 3.8E-08 8.2E-13 100.7 28.7 304 88-427 45-383 (386)
123 KOG4627 Kynurenine formamidase 99.2 1.3E-10 2.8E-15 105.2 9.5 222 450-725 44-267 (270)
124 cd00312 Esterase_lipase Estera 99.1 1.2E-10 2.5E-15 130.1 10.3 225 464-705 78-314 (493)
125 KOG0293 WD40 repeat-containing 99.1 8.9E-09 1.9E-13 102.5 21.0 248 134-437 227-479 (519)
126 PF12740 Chlorophyllase2: Chlo 99.1 3.3E-09 7.2E-14 103.4 17.4 118 464-598 3-133 (259)
127 PRK11126 2-succinyl-6-hydroxy- 99.1 1.6E-09 3.5E-14 108.8 15.6 99 481-595 2-101 (242)
128 PLN02211 methyl indole-3-aceta 99.1 5.1E-09 1.1E-13 106.9 19.3 107 478-595 15-121 (273)
129 COG2272 PnbA Carboxylesterase 99.1 2.2E-10 4.7E-15 119.2 8.6 214 465-704 80-311 (491)
130 KOG0266 WD40 repeat-containing 99.1 2.2E-08 4.7E-13 109.8 24.6 231 129-409 201-438 (456)
131 PLN03084 alpha/beta hydrolase 99.1 4.1E-09 8.9E-14 111.7 17.3 122 458-596 111-232 (383)
132 KOG1454 Predicted hydrolase/ac 99.0 3.6E-09 7.7E-14 109.6 14.5 212 479-725 56-324 (326)
133 COG4946 Uncharacterized protei 99.0 2.6E-07 5.6E-12 93.9 26.9 275 75-418 219-513 (668)
134 PF14583 Pectate_lyase22: Olig 99.0 4.6E-07 9.9E-12 92.9 29.1 259 134-438 38-337 (386)
135 COG0627 Predicted esterase [Ge 99.0 3.7E-09 8E-14 107.6 13.8 231 478-729 51-315 (316)
136 PRK06765 homoserine O-acetyltr 99.0 8.8E-09 1.9E-13 109.5 16.7 114 479-594 54-194 (389)
137 PLN02980 2-oxoglutarate decarb 99.0 1.2E-08 2.6E-13 127.2 20.2 245 465-725 1356-1639(1655)
138 PF05728 UPF0227: Uncharacteri 99.0 1.3E-08 2.8E-13 95.9 15.4 180 483-722 1-186 (187)
139 cd00200 WD40 WD40 domain, foun 99.0 5.3E-07 1.1E-11 91.8 28.9 241 131-429 9-251 (289)
140 KOG3101 Esterase D [General fu 99.0 2.9E-09 6.2E-14 97.0 10.1 215 463-704 26-262 (283)
141 COG2936 Predicted acyl esteras 99.0 3.1E-09 6.7E-14 113.8 11.9 142 449-600 17-163 (563)
142 KOG0272 U4/U6 small nuclear ri 99.0 1.6E-08 3.4E-13 101.2 15.4 231 130-416 216-451 (459)
143 COG4946 Uncharacterized protei 98.9 9.8E-08 2.1E-12 96.9 20.4 237 143-430 50-298 (668)
144 KOG0291 WD40-repeat-containing 98.9 1.1E-06 2.3E-11 94.5 28.7 241 132-429 308-552 (893)
145 TIGR03866 PQQ_ABC_repeats PQQ- 98.9 2.9E-07 6.2E-12 95.5 24.8 206 135-392 76-290 (300)
146 PRK05855 short chain dehydroge 98.9 2.1E-08 4.5E-13 114.9 16.6 107 457-581 8-114 (582)
147 PF03403 PAF-AH_p_II: Platelet 98.9 2.3E-08 5E-13 105.7 14.4 126 463-594 84-260 (379)
148 KOG0286 G-protein beta subunit 98.9 2E-06 4.3E-11 82.6 25.7 243 132-430 56-306 (343)
149 cd00200 WD40 WD40 domain, foun 98.9 1.2E-06 2.6E-11 89.2 26.6 222 134-409 54-277 (289)
150 KOG0272 U4/U6 small nuclear ri 98.9 5.3E-08 1.2E-12 97.5 15.4 230 130-414 174-408 (459)
151 KOG4409 Predicted hydrolase/ac 98.9 7.2E-08 1.6E-12 96.0 16.0 104 480-595 89-194 (365)
152 KOG0279 G protein beta subunit 98.9 6.3E-06 1.4E-10 78.7 27.7 243 130-430 14-265 (315)
153 KOG0266 WD40 repeat-containing 98.8 1.8E-06 3.8E-11 94.8 27.4 243 131-429 159-411 (456)
154 PF00561 Abhydrolase_1: alpha/ 98.8 4.3E-09 9.4E-14 104.5 6.4 78 512-595 1-78 (230)
155 PTZ00421 coronin; Provisional 98.8 1.1E-06 2.3E-11 96.4 25.5 209 130-385 74-294 (493)
156 KOG2112 Lysophospholipase [Lip 98.8 1.4E-07 3.1E-12 87.3 15.6 187 482-724 4-203 (206)
157 PF08662 eIF2A: Eukaryotic tra 98.8 3.9E-07 8.4E-12 87.4 19.2 146 136-321 10-163 (194)
158 KOG0315 G-protein beta subunit 98.8 2.8E-06 6.1E-11 79.7 23.8 227 118-390 63-297 (311)
159 KOG0318 WD40 repeat stress pro 98.8 2.3E-05 4.9E-10 81.2 31.8 117 301-429 443-562 (603)
160 TIGR01838 PHA_synth_I poly(R)- 98.8 2E-07 4.3E-12 102.1 17.1 111 480-598 187-304 (532)
161 KOG0275 Conserved WD40 repeat- 98.8 2.3E-07 4.9E-12 89.7 14.8 241 134-431 216-471 (508)
162 TIGR02658 TTQ_MADH_Hv methylam 98.7 2.7E-05 5.9E-10 80.6 30.9 240 138-430 52-333 (352)
163 KOG2624 Triglyceride lipase-ch 98.7 2.9E-07 6.3E-12 96.4 16.2 144 445-596 42-199 (403)
164 KOG0263 Transcription initiati 98.7 1.2E-06 2.7E-11 94.7 20.4 196 180-428 454-650 (707)
165 KOG0315 G-protein beta subunit 98.7 8E-06 1.7E-10 76.7 22.9 221 158-429 20-247 (311)
166 COG4757 Predicted alpha/beta h 98.7 2E-07 4.3E-12 86.8 12.0 227 454-704 8-263 (281)
167 KOG1446 Histone H3 (Lys4) meth 98.7 0.00013 2.8E-09 71.4 31.3 243 133-430 16-265 (311)
168 PF00135 COesterase: Carboxyle 98.7 4.6E-08 1E-12 110.8 9.2 218 465-704 109-344 (535)
169 KOG0973 Histone transcription 98.7 2.4E-06 5.2E-11 95.8 21.6 241 130-427 68-355 (942)
170 PF02897 Peptidase_S9_N: Proly 98.7 3.9E-05 8.5E-10 83.7 30.9 257 88-385 133-408 (414)
171 PTZ00420 coronin; Provisional 98.6 1.4E-05 2.9E-10 88.4 26.9 207 130-384 73-296 (568)
172 PF08450 SGL: SMP-30/Gluconola 98.6 0.0001 2.2E-09 74.1 31.2 227 136-413 4-245 (246)
173 COG2706 3-carboxymuconate cycl 98.6 0.00019 4.1E-09 71.7 31.5 265 135-437 43-331 (346)
174 KOG0291 WD40-repeat-containing 98.6 6.4E-05 1.4E-09 81.2 29.7 238 134-426 268-507 (893)
175 KOG1407 WD40 repeat protein [F 98.6 1.2E-05 2.6E-10 76.1 21.5 230 131-415 64-294 (313)
176 cd00707 Pancreat_lipase_like P 98.6 1.5E-07 3.3E-12 95.6 9.9 113 479-596 34-147 (275)
177 KOG2984 Predicted hydrolase [G 98.6 1.1E-07 2.4E-12 86.2 7.8 218 483-724 44-275 (277)
178 PF02239 Cytochrom_D1: Cytochr 98.6 2.9E-05 6.2E-10 82.3 27.3 283 135-472 40-337 (369)
179 PRK11028 6-phosphogluconolacto 98.6 3.7E-05 8E-10 81.1 28.3 255 136-429 39-308 (330)
180 PLN00181 protein SPA1-RELATED; 98.6 2.6E-05 5.6E-10 92.3 29.9 239 132-429 484-740 (793)
181 PF06821 Ser_hydrolase: Serine 98.6 1.9E-06 4.2E-11 80.3 16.1 157 484-708 1-158 (171)
182 PRK07868 acyl-CoA synthetase; 98.6 2E-06 4.3E-11 103.8 20.1 106 480-597 66-178 (994)
183 PF08538 DUF1749: Protein of u 98.6 3.6E-07 7.8E-12 91.0 11.2 219 481-722 33-302 (303)
184 PTZ00420 coronin; Provisional 98.6 0.0002 4.3E-09 79.4 33.7 245 139-429 34-295 (568)
185 KOG1407 WD40 repeat protein [F 98.6 1.5E-05 3.3E-10 75.4 20.7 241 132-430 21-264 (313)
186 PF07224 Chlorophyllase: Chlor 98.6 4.6E-07 9.9E-12 86.3 10.4 138 444-598 9-159 (307)
187 KOG0296 Angio-associated migra 98.5 0.0001 2.2E-09 73.3 26.5 244 129-414 104-388 (399)
188 KOG0286 G-protein beta subunit 98.5 7.1E-05 1.5E-09 72.2 24.7 256 179-491 57-317 (343)
189 KOG0305 Anaphase promoting com 98.5 1.9E-05 4.1E-10 84.0 23.1 227 133-411 219-449 (484)
190 PF10282 Lactonase: Lactonase, 98.5 0.00021 4.5E-09 75.7 31.3 264 135-437 40-332 (345)
191 KOG2055 WD40 repeat protein [G 98.5 3.4E-06 7.5E-11 85.8 16.6 201 132-377 304-510 (514)
192 COG2382 Fes Enterochelin ester 98.5 1.3E-06 2.8E-11 85.9 13.2 207 452-706 70-283 (299)
193 KOG0772 Uncharacterized conser 98.5 8.6E-06 1.9E-10 84.0 19.5 238 131-414 214-478 (641)
194 PRK13616 lipoprotein LpqB; Pro 98.5 4.9E-06 1.1E-10 92.9 19.5 172 133-338 351-530 (591)
195 PF08662 eIF2A: Eukaryotic tra 98.5 5.4E-06 1.2E-10 79.5 17.1 102 134-262 62-163 (194)
196 KOG0772 Uncharacterized conser 98.5 3.4E-06 7.3E-11 86.9 16.2 192 128-359 265-467 (641)
197 KOG3847 Phospholipase A2 (plat 98.5 3.9E-06 8.6E-11 81.7 15.7 125 463-592 101-271 (399)
198 KOG0295 WD40 repeat-containing 98.5 1.3E-05 2.9E-10 79.2 19.5 247 130-422 149-403 (406)
199 PTZ00421 coronin; Provisional 98.5 0.00015 3.2E-09 79.8 30.1 243 139-430 36-293 (493)
200 TIGR02658 TTQ_MADH_Hv methylam 98.5 7.2E-05 1.6E-09 77.5 25.6 205 136-389 109-338 (352)
201 KOG0273 Beta-transducin family 98.5 2.2E-05 4.7E-10 80.3 21.0 249 132-414 236-514 (524)
202 KOG0275 Conserved WD40 repeat- 98.5 2.4E-06 5.3E-11 82.7 13.4 230 134-413 266-498 (508)
203 KOG2382 Predicted alpha/beta h 98.5 2.9E-06 6.3E-11 84.6 14.3 228 462-725 35-313 (315)
204 COG2706 3-carboxymuconate cycl 98.5 0.00026 5.6E-09 70.8 27.5 255 92-385 53-327 (346)
205 KOG0263 Transcription initiati 98.4 6.9E-06 1.5E-10 89.1 16.9 195 132-381 452-649 (707)
206 TIGR01839 PHA_synth_II poly(R) 98.4 1.1E-05 2.4E-10 87.5 17.9 83 503-598 239-330 (560)
207 COG2819 Predicted hydrolase of 98.4 1.3E-05 2.7E-10 78.0 16.3 139 455-596 13-172 (264)
208 COG4188 Predicted dienelactone 98.4 1.3E-06 2.8E-11 88.6 9.3 130 451-584 38-182 (365)
209 KOG2564 Predicted acetyltransf 98.4 1.9E-06 4E-11 82.8 9.5 116 452-581 51-166 (343)
210 PF10282 Lactonase: Lactonase, 98.4 0.0002 4.3E-09 75.8 26.2 210 136-385 91-328 (345)
211 PF10340 DUF2424: Protein of u 98.4 5.3E-06 1.1E-10 85.5 13.2 208 467-704 108-350 (374)
212 KOG2096 WD40 repeat protein [G 98.4 0.00016 3.5E-09 70.5 22.2 255 121-430 77-363 (420)
213 KOG0296 Angio-associated migra 98.3 0.00014 2.9E-09 72.4 21.9 202 130-385 63-267 (399)
214 KOG0645 WD40 repeat protein [G 98.3 0.00048 1E-08 65.9 24.6 197 133-377 16-223 (312)
215 COG3208 GrsT Predicted thioest 98.3 7.4E-06 1.6E-10 78.2 12.4 201 480-727 7-234 (244)
216 COG3571 Predicted hydrolase of 98.3 6.7E-05 1.5E-09 65.9 16.9 167 480-705 13-183 (213)
217 PRK10115 protease 2; Provision 98.3 0.0008 1.7E-08 77.5 31.2 256 88-390 136-402 (686)
218 TIGR03230 lipo_lipase lipoprot 98.3 5E-06 1.1E-10 88.5 11.8 113 479-595 39-153 (442)
219 KOG2055 WD40 repeat protein [G 98.3 0.00023 4.9E-09 72.9 22.6 245 132-428 214-468 (514)
220 PF09752 DUF2048: Uncharacteri 98.3 5.3E-05 1.1E-09 76.9 17.8 125 465-594 77-208 (348)
221 COG2021 MET2 Homoserine acetyl 98.3 5.9E-06 1.3E-10 83.6 10.8 113 479-594 49-180 (368)
222 KOG0265 U5 snRNP-specific prot 98.3 0.00042 9E-09 67.3 22.6 242 128-428 44-297 (338)
223 KOG2314 Translation initiation 98.2 0.00043 9.3E-09 72.5 23.6 236 134-414 308-558 (698)
224 KOG4497 Uncharacterized conser 98.2 2.7E-05 5.8E-10 76.1 14.0 194 137-380 14-209 (447)
225 KOG2139 WD40 repeat protein [G 98.2 0.00013 2.9E-09 72.3 18.8 116 130-277 194-311 (445)
226 PRK11028 6-phosphogluconolacto 98.2 0.0017 3.6E-08 68.5 29.0 236 146-427 3-258 (330)
227 PRK13616 lipoprotein LpqB; Pro 98.2 7.2E-05 1.6E-09 83.7 18.9 118 134-279 399-529 (591)
228 KOG0643 Translation initiation 98.2 0.0011 2.3E-08 63.5 23.4 230 130-406 51-300 (327)
229 PF02239 Cytochrom_D1: Cytochr 98.2 0.0023 5E-08 67.9 29.0 249 134-430 80-350 (369)
230 KOG0283 WD40 repeat-containing 98.2 0.00041 8.8E-09 76.3 23.4 177 218-428 390-577 (712)
231 PF11339 DUF3141: Protein of u 98.2 0.0001 2.2E-09 77.6 17.4 101 479-596 67-176 (581)
232 PF06342 DUF1057: Alpha/beta h 98.2 6.8E-05 1.5E-09 73.2 15.2 236 452-709 7-285 (297)
233 KOG0306 WD40-repeat-containing 98.1 0.00039 8.4E-09 75.4 21.8 221 136-409 417-650 (888)
234 KOG0289 mRNA splicing factor [ 98.1 0.00096 2.1E-08 67.9 23.3 238 134-429 222-464 (506)
235 COG1073 Hydrolases of the alph 98.1 2.4E-05 5.2E-10 80.9 12.5 241 456-726 25-298 (299)
236 KOG0305 Anaphase promoting com 98.1 0.00037 8E-09 74.4 21.1 237 132-424 178-418 (484)
237 COG0596 MhpC Predicted hydrola 98.1 0.00014 3E-09 73.0 17.0 103 481-596 21-123 (282)
238 KOG1273 WD40 repeat protein [G 98.1 0.0021 4.5E-08 62.9 23.5 241 135-438 27-290 (405)
239 PLN00181 protein SPA1-RELATED; 98.1 0.0037 8.1E-08 74.2 31.4 221 134-409 535-779 (793)
240 KOG0310 Conserved WD40 repeat- 98.1 0.0012 2.5E-08 68.4 22.9 229 134-415 71-301 (487)
241 PF06433 Me-amine-dh_H: Methyl 98.1 0.0083 1.8E-07 61.0 28.7 248 135-430 39-323 (342)
242 PF02273 Acyl_transf_2: Acyl t 98.0 0.00041 8.8E-09 65.9 16.9 213 457-708 8-242 (294)
243 KOG1553 Predicted alpha/beta h 98.0 2.9E-05 6.3E-10 76.5 9.7 135 452-600 215-349 (517)
244 KOG0645 WD40 repeat protein [G 98.0 0.0028 6.1E-08 60.8 22.4 191 129-377 59-259 (312)
245 KOG1446 Histone H3 (Lys4) meth 98.0 0.0026 5.5E-08 62.5 22.6 221 134-404 59-286 (311)
246 KOG0282 mRNA splicing factor [ 98.0 7E-05 1.5E-09 77.0 12.2 224 131-405 258-486 (503)
247 KOG0273 Beta-transducin family 98.0 0.002 4.4E-08 66.4 22.2 112 134-279 181-308 (524)
248 PF03959 FSH1: Serine hydrolas 98.0 4.8E-05 1E-09 74.3 10.4 168 480-707 3-205 (212)
249 KOG0641 WD40 repeat protein [G 97.9 0.0064 1.4E-07 56.6 22.9 206 130-390 88-311 (350)
250 PF05677 DUF818: Chlamydia CHL 97.9 0.00013 2.8E-09 73.2 12.7 121 450-582 111-236 (365)
251 KOG0643 Translation initiation 97.9 0.00077 1.7E-08 64.4 17.1 205 132-380 94-318 (327)
252 PF11144 DUF2920: Protein of u 97.9 0.00043 9.3E-09 71.7 16.6 149 543-707 164-352 (403)
253 KOG0973 Histone transcription 97.9 0.00027 5.9E-09 79.8 16.2 105 132-260 130-237 (942)
254 KOG2314 Translation initiation 97.9 0.0034 7.4E-08 66.0 22.9 229 156-427 280-525 (698)
255 KOG0282 mRNA splicing factor [ 97.9 0.00031 6.8E-09 72.3 15.2 240 130-430 213-465 (503)
256 KOG0650 WD40 repeat nucleolar 97.9 0.00068 1.5E-08 71.7 17.7 222 130-382 399-638 (733)
257 KOG0646 WD40 repeat protein [G 97.9 0.0013 2.8E-08 67.7 19.2 218 134-401 84-327 (476)
258 KOG1516 Carboxylesterase and r 97.9 1.8E-05 4E-10 89.5 7.0 128 465-596 97-232 (545)
259 KOG2919 Guanine nucleotide-bin 97.9 0.0012 2.5E-08 64.9 18.0 203 159-406 134-353 (406)
260 KOG4497 Uncharacterized conser 97.9 0.0015 3.2E-08 64.2 18.8 105 134-265 51-156 (447)
261 TIGR03502 lipase_Pla1_cef extr 97.9 5.8E-05 1.3E-09 85.7 10.6 100 479-581 447-575 (792)
262 KOG0295 WD40 repeat-containing 97.9 0.0014 2.9E-08 65.4 18.3 244 131-430 108-367 (406)
263 KOG0265 U5 snRNP-specific prot 97.8 0.0017 3.7E-08 63.1 18.2 194 180-426 50-245 (338)
264 KOG0278 Serine/threonine kinas 97.8 0.00065 1.4E-08 64.2 14.7 197 131-380 100-298 (334)
265 KOG0316 Conserved WD40 repeat- 97.8 0.0042 9.1E-08 58.4 19.8 219 132-406 60-283 (307)
266 KOG0284 Polyadenylation factor 97.8 0.00027 5.8E-09 71.3 12.5 222 132-409 97-322 (464)
267 KOG0285 Pleiotropic regulator 97.8 0.0033 7.1E-08 62.6 19.7 235 133-429 153-391 (460)
268 COG3386 Gluconolactonase [Carb 97.8 0.0055 1.2E-07 62.8 22.4 236 135-418 28-280 (307)
269 KOG1274 WD40 repeat protein [G 97.8 0.002 4.4E-08 71.7 20.0 179 107-337 78-264 (933)
270 PRK04940 hypothetical protein; 97.8 0.00077 1.7E-08 62.3 14.1 119 561-723 60-178 (180)
271 TIGR01849 PHB_depoly_PhaZ poly 97.7 0.0009 1.9E-08 70.7 16.0 86 502-599 121-211 (406)
272 KOG0307 Vesicle coat complex C 97.7 0.00018 3.8E-09 81.7 11.0 255 136-430 11-287 (1049)
273 KOG0640 mRNA cleavage stimulat 97.7 0.00088 1.9E-08 65.2 14.2 207 134-390 115-344 (430)
274 KOG1274 WD40 repeat protein [G 97.7 0.02 4.3E-07 64.1 26.1 237 134-428 16-263 (933)
275 KOG1009 Chromatin assembly com 97.7 0.0076 1.6E-07 61.2 21.0 135 100-264 33-187 (434)
276 KOG0316 Conserved WD40 repeat- 97.7 0.026 5.6E-07 53.3 22.7 240 133-430 19-260 (307)
277 PF10142 PhoPQ_related: PhoPQ- 97.7 0.0028 6.1E-08 66.0 18.5 231 466-727 51-322 (367)
278 KOG0278 Serine/threonine kinas 97.7 0.0012 2.7E-08 62.4 14.1 222 154-429 77-299 (334)
279 KOG0284 Polyadenylation factor 97.7 0.00028 6E-09 71.2 10.2 195 180-428 99-295 (464)
280 KOG0639 Transducin-like enhanc 97.7 0.0014 3.1E-08 67.8 15.5 228 133-423 467-702 (705)
281 PF06433 Me-amine-dh_H: Methyl 97.6 0.0035 7.5E-08 63.7 17.7 213 135-390 98-329 (342)
282 PF07433 DUF1513: Protein of u 97.6 0.033 7.3E-07 56.0 24.3 231 130-380 49-284 (305)
283 PF05577 Peptidase_S28: Serine 97.6 0.00021 4.7E-09 78.2 10.0 116 481-597 29-149 (434)
284 KOG2551 Phospholipase/carboxyh 97.6 0.0028 6.1E-08 59.6 15.4 184 480-726 4-221 (230)
285 KOG1445 Tumor-specific antigen 97.6 0.00067 1.5E-08 72.0 12.4 120 130-278 676-799 (1012)
286 KOG2048 WD40 repeat protein [G 97.6 0.02 4.4E-07 61.8 23.4 231 216-494 351-596 (691)
287 PF10647 Gmad1: Lipoprotein Lp 97.6 0.0087 1.9E-07 60.0 19.9 120 133-277 25-144 (253)
288 COG3545 Predicted esterase of 97.6 0.0019 4.1E-08 58.5 13.1 122 535-704 36-157 (181)
289 KOG2048 WD40 repeat protein [G 97.6 0.12 2.6E-06 56.1 28.6 240 134-430 28-278 (691)
290 PLN02919 haloacid dehalogenase 97.6 0.13 2.8E-06 62.4 32.8 255 135-430 571-891 (1057)
291 PF12146 Hydrolase_4: Putative 97.6 0.00029 6.3E-09 56.2 7.1 76 463-552 2-77 (79)
292 KOG0641 WD40 repeat protein [G 97.5 0.044 9.6E-07 51.2 21.8 230 133-406 34-286 (350)
293 KOG0289 mRNA splicing factor [ 97.5 0.026 5.6E-07 57.9 21.8 161 134-345 306-471 (506)
294 PF07433 DUF1513: Protein of u 97.5 0.056 1.2E-06 54.5 24.1 212 181-430 8-250 (305)
295 PF06057 VirJ: Bacterial virul 97.5 0.00092 2E-08 62.0 10.3 87 498-595 16-102 (192)
296 COG3243 PhaC Poly(3-hydroxyalk 97.5 0.0016 3.5E-08 67.3 12.8 89 502-598 130-219 (445)
297 KOG2315 Predicted translation 97.5 0.017 3.7E-07 61.2 20.4 233 136-414 130-375 (566)
298 KOG0771 Prolactin regulatory e 97.4 0.006 1.3E-07 62.2 16.3 200 135-380 148-355 (398)
299 KOG0299 U3 snoRNP-associated p 97.4 0.038 8.2E-07 57.2 21.8 237 132-422 203-454 (479)
300 KOG0306 WD40-repeat-containing 97.4 0.017 3.6E-07 63.2 20.0 245 132-427 374-622 (888)
301 KOG2315 Predicted translation 97.4 0.0071 1.5E-07 63.9 16.8 145 136-321 222-374 (566)
302 KOG1273 WD40 repeat protein [G 97.4 0.021 4.5E-07 56.2 18.7 218 130-394 64-293 (405)
303 KOG1036 Mitotic spindle checkp 97.4 0.16 3.4E-06 50.2 24.7 74 133-231 15-88 (323)
304 PF08450 SGL: SMP-30/Gluconola 97.4 0.043 9.2E-07 55.0 22.4 142 111-278 66-214 (246)
305 PLN02919 haloacid dehalogenase 97.4 0.038 8.3E-07 66.9 25.4 213 134-385 626-892 (1057)
306 COG5354 Uncharacterized protei 97.4 0.027 5.9E-07 59.0 20.2 231 136-415 136-381 (561)
307 KOG0294 WD40 repeat-containing 97.4 0.068 1.5E-06 52.8 21.7 234 132-428 44-282 (362)
308 KOG0292 Vesicle coat complex C 97.3 0.057 1.2E-06 60.4 23.3 214 131-383 51-282 (1202)
309 KOG3253 Predicted alpha/beta h 97.3 0.0043 9.2E-08 66.4 14.1 168 480-705 175-347 (784)
310 TIGR02171 Fb_sc_TIGR02171 Fibr 97.2 0.019 4.2E-07 65.3 18.8 117 144-281 319-444 (912)
311 KOG1063 RNA polymerase II elon 97.2 0.0033 7.1E-08 67.9 12.1 111 130-259 524-635 (764)
312 KOG0283 WD40 repeat-containing 97.2 0.02 4.4E-07 63.4 18.2 103 133-264 371-473 (712)
313 KOG0313 Microtubule binding pr 97.2 0.077 1.7E-06 53.7 20.4 253 134-429 108-378 (423)
314 KOG0639 Transducin-like enhanc 97.2 0.015 3.1E-07 60.6 15.8 218 134-406 422-646 (705)
315 KOG2394 WD40 protein DMR-N9 [G 97.2 0.0012 2.5E-08 69.2 8.0 92 133-252 292-384 (636)
316 KOG1445 Tumor-specific antigen 97.2 0.0045 9.8E-08 66.0 12.3 117 132-280 628-753 (1012)
317 KOG0640 mRNA cleavage stimulat 97.2 0.011 2.3E-07 57.9 13.8 196 132-377 217-424 (430)
318 KOG0277 Peroxisomal targeting 97.1 0.03 6.6E-07 53.5 16.2 236 136-423 13-263 (311)
319 COG3150 Predicted esterase [Ge 97.1 0.006 1.3E-07 54.5 10.9 138 542-722 42-186 (191)
320 COG1770 PtrB Protease II [Amin 97.1 0.6 1.3E-05 51.5 28.0 252 90-385 140-400 (682)
321 KOG2106 Uncharacterized conser 97.1 0.033 7.2E-07 58.2 17.3 108 136-275 412-519 (626)
322 COG4947 Uncharacterized protei 97.1 0.0036 7.9E-08 55.9 9.0 126 546-702 88-214 (227)
323 KOG0307 Vesicle coat complex C 97.1 0.0041 8.9E-08 71.0 11.5 245 133-425 66-327 (1049)
324 KOG0647 mRNA export protein (c 97.1 0.065 1.4E-06 52.6 17.9 196 133-380 29-229 (347)
325 KOG0303 Actin-binding protein 97.0 0.18 3.9E-06 51.4 21.4 115 132-279 82-205 (472)
326 PF00151 Lipase: Lipase; Inte 97.0 0.00084 1.8E-08 69.7 5.5 113 478-594 68-185 (331)
327 TIGR02171 Fb_sc_TIGR02171 Fibr 97.0 0.041 8.9E-07 62.8 18.7 84 106-198 330-420 (912)
328 PRK02888 nitrous-oxide reducta 97.0 0.096 2.1E-06 57.8 20.9 195 139-382 200-405 (635)
329 PF06977 SdiA-regulated: SdiA- 97.0 0.11 2.3E-06 51.5 19.5 207 134-378 24-247 (248)
330 KOG4840 Predicted hydrolases o 96.9 0.021 4.5E-07 53.5 12.9 107 483-599 37-147 (299)
331 KOG0319 WD40-repeat-containing 96.9 0.084 1.8E-06 57.9 19.4 237 132-427 193-442 (775)
332 COG5354 Uncharacterized protei 96.9 0.031 6.7E-07 58.6 15.5 143 136-319 227-377 (561)
333 KOG2139 WD40 repeat protein [G 96.9 0.19 4E-06 50.7 20.2 199 132-381 99-311 (445)
334 KOG2096 WD40 repeat protein [G 96.9 0.036 7.9E-07 54.6 14.9 161 244-423 88-256 (420)
335 PF06028 DUF915: Alpha/beta hy 96.9 0.015 3.3E-07 57.8 12.8 152 542-723 86-253 (255)
336 PF10230 DUF2305: Uncharacteri 96.9 0.0063 1.4E-07 61.5 10.2 111 481-596 2-122 (266)
337 KOG4378 Nuclear protein COP1 [ 96.9 0.044 9.6E-07 57.1 15.9 116 132-279 165-282 (673)
338 KOG2183 Prolylcarboxypeptidase 96.9 0.0052 1.1E-07 63.0 9.1 93 504-596 104-203 (492)
339 KOG0319 WD40-repeat-containing 96.8 0.13 2.9E-06 56.4 19.8 239 138-429 331-579 (775)
340 KOG0308 Conserved WD40 repeat- 96.8 0.16 3.5E-06 55.0 20.1 282 136-461 29-319 (735)
341 PTZ00472 serine carboxypeptida 96.8 0.0098 2.1E-07 65.1 11.3 131 463-599 61-219 (462)
342 KOG2110 Uncharacterized conser 96.7 0.053 1.2E-06 54.6 15.0 117 132-278 130-249 (391)
343 KOG0302 Ribosome Assembly prot 96.7 0.08 1.7E-06 53.5 16.0 157 136-336 216-379 (440)
344 KOG2110 Uncharacterized conser 96.7 0.1 2.2E-06 52.6 16.7 147 253-425 96-248 (391)
345 PF07676 PD40: WD40-like Beta 96.7 0.0035 7.5E-08 42.3 4.4 29 134-162 11-39 (39)
346 KOG1009 Chromatin assembly com 96.7 0.079 1.7E-06 54.1 15.7 114 134-260 126-248 (434)
347 KOG4389 Acetylcholinesterase/B 96.7 0.0026 5.6E-08 66.4 5.4 112 483-598 137-257 (601)
348 PF06977 SdiA-regulated: SdiA- 96.7 0.24 5.1E-06 49.1 19.0 201 180-424 24-247 (248)
349 PF07819 PGAP1: PGAP1-like pro 96.6 0.014 3.1E-07 57.3 10.4 103 481-590 4-117 (225)
350 KOG0310 Conserved WD40 repeat- 96.6 0.21 4.6E-06 52.2 18.8 117 131-279 110-227 (487)
351 KOG2919 Guanine nucleotide-bin 96.6 0.16 3.4E-06 50.5 16.9 111 308-428 165-282 (406)
352 COG3386 Gluconolactonase [Carb 96.6 0.18 4E-06 51.7 18.2 62 133-195 112-180 (307)
353 PLN02733 phosphatidylcholine-s 96.6 0.0042 9.1E-08 66.9 6.5 86 498-593 109-198 (440)
354 KOG0303 Actin-binding protein 96.5 0.07 1.5E-06 54.2 14.4 161 131-332 131-293 (472)
355 KOG1538 Uncharacterized conser 96.5 0.12 2.5E-06 56.1 16.7 98 133-261 14-112 (1081)
356 KOG0281 Beta-TrCP (transducin 96.5 0.028 6.2E-07 55.8 11.4 179 153-385 252-432 (499)
357 KOG1539 WD repeat protein [Gen 96.5 0.01 2.3E-07 65.5 9.0 91 157-275 555-646 (910)
358 KOG0288 WD40 repeat protein Ti 96.5 0.086 1.9E-06 53.9 14.6 221 133-409 221-447 (459)
359 KOG0299 U3 snoRNP-associated p 96.4 0.63 1.4E-05 48.5 20.7 200 130-385 141-360 (479)
360 PF01674 Lipase_2: Lipase (cla 96.4 0.014 3E-07 56.6 8.2 89 484-581 4-95 (219)
361 PF00450 Peptidase_S10: Serine 96.3 0.0086 1.9E-07 65.3 7.3 141 454-599 16-184 (415)
362 COG3490 Uncharacterized protei 96.3 0.9 1.9E-05 44.7 19.7 59 136-197 72-133 (366)
363 PF03096 Ndr: Ndr family; Int 96.3 0.14 3.1E-06 51.1 14.9 128 456-596 4-134 (283)
364 KOG0264 Nucleosome remodeling 96.3 0.97 2.1E-05 47.1 21.0 201 181-427 181-404 (422)
365 KOG0288 WD40 repeat protein Ti 96.3 0.16 3.6E-06 51.9 15.2 172 153-370 278-452 (459)
366 KOG0771 Prolactin regulatory e 96.2 0.088 1.9E-06 54.0 13.3 181 181-409 148-340 (398)
367 KOG0313 Microtubule binding pr 96.2 0.13 2.9E-06 52.0 14.3 118 131-278 260-377 (423)
368 PF10647 Gmad1: Lipoprotein Lp 96.2 0.69 1.5E-05 46.4 20.0 168 180-389 26-204 (253)
369 KOG0274 Cdc4 and related F-box 96.2 1.1 2.3E-05 50.0 22.9 231 134-430 252-485 (537)
370 PF05705 DUF829: Eukaryotic pr 96.2 0.06 1.3E-06 53.7 11.9 63 648-721 177-239 (240)
371 KOG4283 Transcription-coupled 96.1 1.6 3.4E-05 43.1 23.4 107 130-263 100-209 (397)
372 COG3391 Uncharacterized conser 96.1 1.6 3.5E-05 46.7 23.0 210 135-385 77-287 (381)
373 KOG0276 Vesicle coat complex C 96.0 0.72 1.6E-05 50.0 19.2 193 136-379 60-255 (794)
374 KOG0264 Nucleosome remodeling 96.0 0.35 7.5E-06 50.2 16.4 199 136-377 182-402 (422)
375 KOG2237 Predicted serine prote 96.0 0.013 2.9E-07 63.4 6.6 102 95-199 100-204 (712)
376 TIGR03300 assembly_YfgL outer 96.0 2.8 6.1E-05 44.9 31.6 128 313-461 241-371 (377)
377 COG4814 Uncharacterized protei 96.0 0.15 3.3E-06 49.2 12.8 207 480-723 45-285 (288)
378 KOG0277 Peroxisomal targeting 96.0 1.3 2.9E-05 42.7 18.9 221 134-403 63-288 (311)
379 KOG0285 Pleiotropic regulator 96.0 0.3 6.4E-06 49.2 15.2 158 242-430 151-310 (460)
380 KOG0270 WD40 repeat-containing 96.0 2.5 5.4E-05 44.1 22.8 155 182-381 248-404 (463)
381 KOG0268 Sof1-like rRNA process 96.0 0.053 1.1E-06 54.5 10.0 159 132-335 188-347 (433)
382 KOG1524 WD40 repeat-containing 96.0 0.22 4.7E-06 52.8 14.8 164 181-412 108-275 (737)
383 KOG4283 Transcription-coupled 96.0 0.42 9.1E-06 46.9 15.7 135 120-280 128-279 (397)
384 KOG4378 Nuclear protein COP1 [ 95.8 3.1 6.7E-05 44.0 22.8 242 134-430 37-283 (673)
385 KOG0281 Beta-TrCP (transducin 95.8 0.11 2.4E-06 51.8 11.3 219 153-429 212-430 (499)
386 PF07519 Tannase: Tannase and 95.8 0.053 1.1E-06 59.5 10.3 129 464-598 16-152 (474)
387 PF04762 IKI3: IKI3 family; I 95.8 6.5 0.00014 47.2 30.3 119 245-381 212-333 (928)
388 KOG2182 Hydrolytic enzymes of 95.7 0.06 1.3E-06 57.1 9.8 118 479-596 84-207 (514)
389 KOG0269 WD40 repeat-containing 95.7 0.33 7.2E-06 53.8 15.6 198 130-371 132-332 (839)
390 KOG2394 WD40 protein DMR-N9 [G 95.7 0.18 3.9E-06 53.5 13.0 54 246-318 294-349 (636)
391 KOG2321 WD40 repeat protein [G 95.7 1 2.2E-05 48.4 18.4 95 309-412 236-332 (703)
392 KOG0302 Ribosome Assembly prot 95.7 0.11 2.3E-06 52.6 10.8 127 122-278 249-379 (440)
393 PF08386 Abhydrolase_4: TAP-li 95.6 0.019 4.1E-07 48.6 4.7 59 649-723 34-92 (103)
394 PF05990 DUF900: Alpha/beta hy 95.6 0.054 1.2E-06 53.5 8.6 96 479-581 16-113 (233)
395 KOG3967 Uncharacterized conser 95.6 0.12 2.7E-06 48.1 10.1 109 468-585 89-214 (297)
396 KOG0646 WD40 repeat protein [G 95.6 0.95 2E-05 47.4 17.3 174 219-427 62-247 (476)
397 PF07082 DUF1350: Protein of u 95.5 0.58 1.3E-05 45.6 15.0 102 467-583 8-112 (250)
398 COG1506 DAP2 Dipeptidyl aminop 95.5 4.6 0.0001 46.4 25.0 245 88-380 69-343 (620)
399 PF07676 PD40: WD40-like Beta 95.4 0.05 1.1E-06 36.5 5.5 30 244-273 10-39 (39)
400 KOG1034 Transcriptional repres 95.4 0.21 4.7E-06 49.7 11.7 87 119-228 118-213 (385)
401 KOG1539 WD repeat protein [Gen 95.4 1.6 3.6E-05 49.0 19.5 93 325-425 554-646 (910)
402 KOG1524 WD40 repeat-containing 95.4 2.2 4.8E-05 45.5 19.4 112 132-278 105-217 (737)
403 PF00975 Thioesterase: Thioest 95.3 0.066 1.4E-06 52.8 8.5 85 482-581 1-86 (229)
404 PF13360 PQQ_2: PQQ-like domai 95.3 3.2 7E-05 40.9 23.8 104 312-430 121-233 (238)
405 KOG1408 WD40 repeat protein [F 95.3 0.14 3E-06 56.0 10.8 133 115-278 57-197 (1080)
406 KOG0290 Conserved WD40 repeat- 95.3 3.4 7.5E-05 40.8 19.1 257 133-428 46-319 (364)
407 PF13360 PQQ_2: PQQ-like domai 95.2 3.2 6.9E-05 40.9 20.2 187 139-385 32-234 (238)
408 COG3391 Uncharacterized conser 95.2 5.6 0.00012 42.7 26.7 246 135-430 34-286 (381)
409 KOG0294 WD40 repeat-containing 95.1 4 8.7E-05 40.8 21.2 191 132-382 84-282 (362)
410 COG3490 Uncharacterized protei 95.0 4 8.7E-05 40.4 23.0 214 181-430 71-313 (366)
411 PRK02888 nitrous-oxide reducta 95.0 1.2 2.7E-05 49.4 17.4 150 247-428 239-405 (635)
412 KOG2565 Predicted hydrolases o 95.0 0.099 2.1E-06 53.1 8.2 120 460-592 132-260 (469)
413 KOG1523 Actin-related protein 94.9 1.9 4.1E-05 43.1 16.5 204 181-429 14-238 (361)
414 KOG2321 WD40 repeat protein [G 94.9 0.62 1.4E-05 49.9 13.9 97 326-430 154-261 (703)
415 KOG1408 WD40 repeat protein [F 94.9 1.4 3E-05 48.6 16.8 112 245-381 599-713 (1080)
416 KOG4328 WD40 protein [Function 94.8 3.9 8.4E-05 42.9 19.0 246 132-429 187-452 (498)
417 KOG2100 Dipeptidyl aminopeptid 94.6 12 0.00026 43.9 26.4 63 137-199 102-169 (755)
418 KOG4328 WD40 protein [Function 94.6 7 0.00015 41.1 21.8 244 132-425 235-493 (498)
419 PF11187 DUF2974: Protein of u 94.6 0.069 1.5E-06 52.1 6.0 72 519-591 43-118 (224)
420 KOG4388 Hormone-sensitive lipa 94.4 0.11 2.3E-06 55.8 7.0 90 479-580 394-488 (880)
421 PLN03016 sinapoylglucose-malat 94.4 0.12 2.7E-06 55.9 7.9 140 454-599 42-213 (433)
422 KOG0269 WD40 repeat-containing 94.3 0.6 1.3E-05 51.8 12.8 118 133-278 178-297 (839)
423 PLN02209 serine carboxypeptida 94.3 0.21 4.6E-06 54.1 9.4 139 454-598 44-214 (437)
424 KOG4227 WD40 repeat protein [G 94.2 2.6 5.7E-05 43.0 16.0 118 131-279 56-181 (609)
425 KOG1920 IkappaB kinase complex 94.2 3.9 8.5E-05 48.3 19.3 60 133-197 70-129 (1265)
426 COG3204 Uncharacterized protei 94.2 6.7 0.00015 39.2 20.1 203 133-370 87-304 (316)
427 PF04762 IKI3: IKI3 family; I 94.1 7.5 0.00016 46.7 22.6 108 136-262 214-324 (928)
428 KOG1523 Actin-related protein 94.1 2.3 5.1E-05 42.5 15.1 212 132-381 56-280 (361)
429 KOG0647 mRNA export protein (c 94.1 6.8 0.00015 39.0 20.4 52 134-190 75-126 (347)
430 PRK13613 lipoprotein LpqB; Pro 93.9 5.7 0.00012 45.0 20.0 173 133-338 364-542 (599)
431 PF15492 Nbas_N: Neuroblastoma 93.8 7.6 0.00016 38.5 24.2 53 137-197 3-63 (282)
432 KOG1963 WD40 repeat protein [G 93.6 16 0.00035 41.7 22.3 59 133-198 253-313 (792)
433 PF12048 DUF3530: Protein of u 93.6 4.4 9.5E-05 41.9 17.2 135 452-594 63-227 (310)
434 KOG1332 Vesicle coat complex C 93.6 6.5 0.00014 38.0 16.4 65 350-414 208-277 (299)
435 KOG1007 WD repeat protein TSSC 93.3 8.4 0.00018 38.2 17.0 113 133-278 125-246 (370)
436 KOG2931 Differentiation-relate 93.3 1.2 2.6E-05 44.2 11.5 130 452-595 23-156 (326)
437 KOG0274 Cdc4 and related F-box 93.2 17 0.00037 40.7 24.8 223 155-437 225-450 (537)
438 KOG1282 Serine carboxypeptidas 93.2 0.41 9E-06 51.6 9.2 141 454-599 49-216 (454)
439 PF05057 DUF676: Putative seri 93.1 0.11 2.4E-06 50.8 4.4 22 560-581 77-98 (217)
440 KOG0300 WD40 repeat-containing 93.1 10 0.00023 37.8 18.4 155 244-429 274-430 (481)
441 KOG0649 WD40 repeat protein [G 93.0 3.7 8E-05 39.5 13.8 73 309-390 122-195 (325)
442 KOG1007 WD repeat protein TSSC 93.0 10 0.00022 37.5 19.9 151 179-371 125-281 (370)
443 KOG0267 Microtubule severing p 92.9 0.43 9.4E-06 52.5 8.6 114 132-278 71-185 (825)
444 PRK11138 outer membrane biogen 92.5 18 0.00038 39.0 30.7 100 312-430 255-356 (394)
445 KOG0649 WD40 repeat protein [G 92.5 4.5 9.8E-05 38.9 13.7 72 352-430 117-189 (325)
446 KOG3975 Uncharacterized conser 92.4 2 4.2E-05 41.7 11.2 116 463-581 11-130 (301)
447 COG3319 Thioesterase domains o 92.1 0.47 1E-05 47.2 7.2 85 482-581 1-85 (257)
448 PRK10252 entF enterobactin syn 92.0 0.63 1.4E-05 59.0 10.2 99 481-594 1068-1169(1296)
449 TIGR03300 assembly_YfgL outer 91.8 20 0.00044 38.2 27.4 92 327-430 200-300 (377)
450 KOG1063 RNA polymerase II elon 91.8 13 0.00028 41.4 17.9 67 180-264 528-594 (764)
451 KOG1963 WD40 repeat protein [G 91.7 1.9 4.1E-05 48.8 12.0 115 130-278 204-323 (792)
452 KOG1034 Transcriptional repres 91.7 16 0.00036 36.9 20.2 97 156-277 113-211 (385)
453 KOG0292 Vesicle coat complex C 91.5 32 0.00068 39.7 22.1 242 132-430 10-283 (1202)
454 KOG0650 WD40 repeat nucleolar 91.4 9.3 0.0002 41.7 16.0 73 350-429 522-597 (733)
455 KOG0276 Vesicle coat complex C 91.4 26 0.00057 38.6 24.4 218 133-404 15-238 (794)
456 KOG0290 Conserved WD40 repeat- 91.2 17 0.00037 36.2 19.8 117 245-381 199-318 (364)
457 KOG2111 Uncharacterized conser 91.2 16 0.00035 36.8 16.4 95 326-427 158-256 (346)
458 PF04083 Abhydro_lipase: Parti 91.0 0.9 2E-05 34.2 6.1 50 447-497 8-59 (63)
459 KOG0308 Conserved WD40 repeat- 90.8 11 0.00024 41.5 16.1 112 219-358 194-306 (735)
460 PF07519 Tannase: Tannase and 90.6 0.37 8E-06 53.0 5.3 73 650-724 354-426 (474)
461 PRK13614 lipoprotein LpqB; Pro 90.5 25 0.00055 39.5 19.4 173 133-338 344-521 (573)
462 COG4782 Uncharacterized protei 90.2 0.87 1.9E-05 46.7 7.1 111 480-598 115-236 (377)
463 KOG0268 Sof1-like rRNA process 90.2 3.5 7.6E-05 42.0 11.0 133 217-377 209-343 (433)
464 PF01764 Lipase_3: Lipase (cla 90.1 0.58 1.3E-05 42.0 5.4 38 542-581 47-84 (140)
465 KOG0267 Microtubule severing p 90.0 0.62 1.4E-05 51.3 6.2 102 130-259 153-255 (825)
466 KOG2106 Uncharacterized conser 90.0 30 0.00066 37.1 25.9 92 308-408 414-506 (626)
467 KOG1538 Uncharacterized conser 89.9 4.7 0.0001 44.3 12.4 189 180-425 15-211 (1081)
468 PF04053 Coatomer_WDAD: Coatom 89.7 31 0.00067 37.6 19.0 167 134-364 35-210 (443)
469 PF13449 Phytase-like: Esteras 89.7 29 0.00062 36.3 18.4 138 133-278 86-252 (326)
470 KOG0300 WD40 repeat-containing 89.5 14 0.0003 37.0 14.3 59 327-390 378-436 (481)
471 TIGR03075 PQQ_enz_alc_DH PQQ-d 89.5 41 0.00088 37.8 28.6 61 326-392 440-501 (527)
472 KOG0270 WD40 repeat-containing 88.9 34 0.00073 36.1 18.3 98 154-278 262-361 (463)
473 COG1075 LipA Predicted acetylt 88.8 1.3 2.7E-05 46.6 7.5 97 483-594 61-162 (336)
474 KOG4499 Ca2+-binding protein R 88.1 11 0.00024 36.3 12.1 61 134-196 111-176 (310)
475 cd00741 Lipase Lipase. Lipase 87.9 0.86 1.9E-05 41.7 5.0 25 559-583 26-50 (153)
476 KOG2041 WD40 repeat protein [G 87.7 14 0.00031 41.1 14.3 116 129-278 69-187 (1189)
477 PHA03098 kelch-like protein; P 87.6 43 0.00094 37.7 19.5 116 313-437 389-519 (534)
478 KOG4532 WD40-like repeat conta 87.2 32 0.0007 33.9 16.0 149 158-346 138-293 (344)
479 PF02450 LCAT: Lecithin:choles 86.7 1.1 2.4E-05 48.2 5.6 87 498-594 66-158 (389)
480 PF03088 Str_synth: Strictosid 86.5 8.4 0.00018 31.3 9.2 59 136-196 2-75 (89)
481 KOG2541 Palmitoyl protein thio 86.3 14 0.00031 36.4 12.1 88 481-581 24-112 (296)
482 KOG1036 Mitotic spindle checkp 86.0 40 0.00088 33.9 16.1 149 244-429 15-165 (323)
483 PF11288 DUF3089: Protein of u 85.5 2 4.3E-05 41.1 6.0 87 510-597 44-138 (207)
484 PRK13613 lipoprotein LpqB; Pro 84.7 20 0.00042 40.8 14.4 130 77-229 405-542 (599)
485 PF02089 Palm_thioest: Palmito 84.2 5.9 0.00013 39.7 8.9 31 561-591 80-111 (279)
486 COG4257 Vgb Streptogramin lyas 83.9 42 0.00091 33.4 14.0 108 308-429 110-220 (353)
487 KOG4532 WD40-like repeat conta 83.6 48 0.001 32.7 14.3 125 246-391 162-292 (344)
488 PF06259 Abhydrolase_8: Alpha/ 83.5 3 6.6E-05 38.9 6.2 38 540-581 92-129 (177)
489 PF03283 PAE: Pectinacetyleste 83.5 1.4 3.1E-05 46.4 4.6 38 543-580 138-175 (361)
490 KOG3914 WD repeat protein WDR4 83.5 43 0.00094 34.9 14.7 74 308-390 158-232 (390)
491 COG4257 Vgb Streptogramin lyas 83.3 51 0.0011 32.8 19.5 226 136-414 108-337 (353)
492 cd00519 Lipase_3 Lipase (class 83.0 3 6.4E-05 41.1 6.4 38 542-581 111-148 (229)
493 KOG0321 WD40 repeat-containing 82.8 85 0.0018 35.0 21.6 287 99-424 59-390 (720)
494 PRK13614 lipoprotein LpqB; Pro 82.7 27 0.00058 39.3 14.2 130 77-228 379-520 (573)
495 KOG1920 IkappaB kinase complex 82.7 13 0.00029 44.1 11.9 111 136-265 200-312 (1265)
496 PHA02713 hypothetical protein; 82.4 95 0.0021 35.2 21.6 103 327-438 432-542 (557)
497 KOG4547 WD40 repeat-containing 82.4 83 0.0018 34.5 16.9 97 326-428 123-223 (541)
498 KOG3724 Negative regulator of 82.2 1.5 3.3E-05 49.3 4.1 46 543-589 157-209 (973)
499 KOG4499 Ca2+-binding protein R 81.6 54 0.0012 31.8 18.8 88 308-400 164-260 (310)
500 PLN02454 triacylglycerol lipas 81.5 2.4 5.3E-05 44.9 5.3 40 541-580 208-247 (414)
No 1
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-113 Score=890.40 Aligned_cols=662 Identities=27% Similarity=0.505 Sum_probs=595.0
Q ss_pred CCCCcccccCceeeeecCccccCCCccccCCC--CHHHHHHHHHHHHHHHHHHcCC-hhHHHHHHHHHhhcCCCCCCCcE
Q 004766 11 LQYPVARRDESVVDDYHGVKIVDPYRWLEDPD--AEEVKDFVQKQVELTDSVLKNC-DVRDKLREKITKLFDSPRYDAPF 87 (732)
Q Consensus 11 ~~~P~~~~~~~~~~~~~g~~~~D~y~wLed~~--~~~~~~~l~~qn~~t~~~l~~~-~~~~~l~~~~~~~~~~~~~~~p~ 87 (732)
+.||.|+|.|+ +++.||.++.|+|+||+|.+ +|+|++||+|||+|+++.++++ +++++|++||+.+++.++.|+|.
T Consensus 4 p~pP~a~k~~~-~~~~hg~~~~D~Y~WlRd~~~~~p~vl~yL~aEN~Yt~~~~a~~~~L~~~if~Ei~~Rik~dd~Svp~ 82 (682)
T COG1770 4 PLPPIAKKVPT-TRTHHGDTRVDDYAWLRDDNWSNPEVLAYLEAENAYTEAVMAHLQPLQKKIFEEIKGRIKEDDLSVPY 82 (682)
T ss_pred CCCCCccccce-eeeecCceeecchHhhhCCcccChHHHHHHHHhhHHHHHhhhhhHHHHHHHHHHHhhhccCcCCCCcc
Confidence 36899999996 89999999999999999998 9999999999999999999999 99999999999999999999999
Q ss_pred EeCCEEEEEEEcCCCCeeEEEEEeCCCC--CceEEeCCCCcCCC-CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEE
Q 004766 88 KRGNKYFYFHNTGLQPQSVLYVQDSLDA--KAKVLLDPNTLSDD-GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMR 164 (732)
Q Consensus 88 ~~g~~~~~~~~~~~~~~~~l~~r~~~~~--~~~~l~D~~~l~~~-~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 164 (732)
+.|.++||.+...+.+++ +|+|...++ .+++|||+|+++++ ..++++.+++|||++++||+.|..|+|.++|+++|
T Consensus 83 ~~~~~~Yy~r~~~g~~y~-~~~R~~~~g~~~eevlLD~n~~A~g~~f~~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kd 161 (682)
T COG1770 83 RKGPYEYYSRTEEGKEYP-IYCRQPDEGGEGEEVLLDVNKEAEGHDFFSLGAASISPDHNLLAYSVDVLGDEQYTLRFKD 161 (682)
T ss_pred ccCCeeEEEEecCCCcce-eEEeccCCCCCceeEeecchhccCcccceeeeeeeeCCCCceEEEEEecccccEEEEEEEe
Confidence 999999999988777765 666633333 37999999999977 57899999999999999999999999999999999
Q ss_pred CCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCee
Q 004766 165 IEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKY 244 (732)
Q Consensus 165 l~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~ 244 (732)
+++|+.+++.+.++. .+++|.+|+++|+|++.++ ..++.+||+|.+|++...+.+||++++ +.|
T Consensus 162 L~tg~~~~d~i~~~~-~~~~Wa~d~~~lfYt~~d~--------------~~rp~kv~~h~~gt~~~~d~lvyeE~d-~~f 225 (682)
T COG1770 162 LATGEELPDEITNTS-GSFAWAADGKTLFYTRLDE--------------NHRPDKVWRHRLGTPGSSDELVYEEKD-DRF 225 (682)
T ss_pred cccccccchhhcccc-cceEEecCCCeEEEEEEcC--------------CCCcceEEEEecCCCCCcceEEEEcCC-CcE
Confidence 999999988887753 8899999999999999876 468999999999998889999999987 567
Q ss_pred EEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCC
Q 004766 245 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDA 324 (732)
Q Consensus 245 ~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~ 324 (732)
..++..|.+.++|++..++.. ++++++++.+... ..+...+....+..+. ..+.|+.+|+.+|.++
T Consensus 226 ~~~v~~s~s~~yi~i~~~~~~--tsE~~ll~a~~p~-----------~~p~vv~pr~~g~eY~-~eh~~d~f~i~sN~~g 291 (682)
T COG1770 226 FLSVGRSRSEAYIVISLGSHI--TSEVRLLDADDPE-----------AEPKVVLPRENGVEYS-VEHGGDRFYILSNADG 291 (682)
T ss_pred EEEeeeccCCceEEEEcCCCc--ceeEEEEecCCCC-----------CceEEEEEcCCCcEEe-eeecCcEEEEEecCCC
Confidence 789999999999999886655 7899999988732 2222222222233333 5667999999999999
Q ss_pred CCceEEEEeC-CCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc--cceee-Eee
Q 004766 325 PKYKIIRVDL-KEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE--IGSVN-AIS 400 (732)
Q Consensus 325 ~~~~l~~~d~-~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~--~g~v~-~~~ 400 (732)
.+++|++.++ .+...|+.++++.++..|+++..+. ++|++..+.++.++|++++..+|+. ..|.++ ..+.. ..+
T Consensus 292 knf~l~~ap~~~~~~~w~~~I~h~~~~~l~~~~~f~-~~lVl~eR~~glp~v~v~~~~~~~~-~~i~f~~~ay~~~l~~~ 369 (682)
T COG1770 292 KNFKLVRAPVSADKSNWRELIPHREDVRLEGVDLFA-DHLVLLERQEGLPRVVVRDRKTGEE-RGIAFDDEAYSAGLSGN 369 (682)
T ss_pred cceEEEEccCCCChhcCeeeeccCCCceeeeeeeec-cEEEEEecccCCceEEEEecCCCce-eeEEecchhhhccccCC
Confidence 9999999998 2334699999999999999999998 8999999999999999999988876 567776 22221 234
Q ss_pred cccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEeecCCC-CCCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCC
Q 004766 401 ARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPG-FDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDG 479 (732)
Q Consensus 401 ~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~ 479 (732)
..++.+.|+++++|+++|.+++.+|+.+++ .++|+++++++ |+++.|+++++++++.|| ++||++|+++++.+.++
T Consensus 370 ~e~~s~~lR~~ysS~ttP~~~~~~dm~t~e--r~~LkqqeV~~g~dp~~Y~s~riwa~a~dg-v~VPVSLvyrkd~~~~g 446 (682)
T COG1770 370 PEFDSDRLRYSYSSMTTPATLFDYDMATGE--RTLLKQQEVPGGFDPEDYVSRRIWATADDG-VQVPVSLVYRKDTKLDG 446 (682)
T ss_pred CCCCCccEEEEeecccccceeEEeeccCCc--EEEEEeccCCCCCChhHeEEEEEEEEcCCC-cEeeEEEEEecccCCCC
Confidence 456889999999999999999999999995 89999999996 999999999999999999 99999999999988899
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCC
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 559 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 559 (732)
++||+||+||+||+++.+.|+..++++|+ |||+++++|+||||+.|+.||++|+..+|+|+|+||++|+++|+++|+++
T Consensus 447 ~~p~lLygYGaYG~s~~p~Fs~~~lSLlD-RGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~ 525 (682)
T COG1770 447 SAPLLLYGYGAYGISMDPSFSIARLSLLD-RGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTS 525 (682)
T ss_pred CCcEEEEEeccccccCCcCcccceeeeec-CceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCC
Confidence 99999999999999999999998899999 99999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc-----CCCCCccccccCCCCCHHHHHHHHhcCcccC
Q 004766 560 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK-----FTIGHAWVSDFGCSEEEEEFYWLIKYSPLHN 634 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~-----~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~ 634 (732)
+++|+++|+|+||+|++++++++|++|+++|+.|||+|++++|. +|.. .| .|||||.+++.+++|++||||.|
T Consensus 526 ~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~-E~-~EWGNP~d~e~y~yikSYSPYdN 603 (682)
T COG1770 526 PDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVT-EW-DEWGNPLDPEYYDYIKSYSPYDN 603 (682)
T ss_pred ccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCcc-ch-hhhCCcCCHHHHHHHhhcCchhc
Confidence 99999999999999999999999999999999999999998874 2332 34 89999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHH
Q 004766 635 VRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDE 714 (732)
Q Consensus 635 ~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 714 (732)
++. +.|||+|+++|.+|+||.+|++.|++++|++. ++++.|++|++.+++||++.+++.+.+++
T Consensus 604 V~a---------~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~-------~td~~plLlkt~M~aGHgG~SgRf~~lee 667 (682)
T COG1770 604 VEA---------QPYPAILVTTGLNDPRVQYWEPAKWVAKLREL-------KTDGNPLLLKTNMDAGHGGASGRFQRLEE 667 (682)
T ss_pred ccc---------CCCCceEEEccccCCccccchHHHHHHHHhhc-------ccCCCcEEEEecccccCCCCCCchHHHHH
Confidence 998 49999999999999999999999999999998 77788999999999999999999999999
Q ss_pred HHHHHHHHHHHhCC
Q 004766 715 AADRYGFMAKMLGA 728 (732)
Q Consensus 715 ~~~~~~fl~~~l~~ 728 (732)
.+..++|+.+.++.
T Consensus 668 ~A~eYaF~l~~~~~ 681 (682)
T COG1770 668 IAFEYAFLLKLAGT 681 (682)
T ss_pred HHHHHHHHhhhccC
Confidence 99999999998764
No 2
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-107 Score=836.90 Aligned_cols=701 Identities=51% Similarity=0.847 Sum_probs=567.0
Q ss_pred CCCCCcccccCceeeeecCccccCCCccccCCCCHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhcCCCCCCCcEEe
Q 004766 10 SLQYPVARRDESVVDDYHGVKIVDPYRWLEDPDAEEVKDFVQKQVELTDSVLKNCDVRDKLREKITKLFDSPRYDAPFKR 89 (732)
Q Consensus 10 ~~~~P~~~~~~~~~~~~~g~~~~D~y~wLed~~~~~~~~~l~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~~ 89 (732)
+..||+++|+..+++.+||+++.|||+||||+++.++.+||++||.||+++|+.....++|+.||+.++.++.+++|.+.
T Consensus 3 ~~~~P~~~k~e~~~~~~hg~~v~Dpy~Wl~d~d~~~~~~fv~~en~~t~~vl~~~e~~~kl~~em~~~i~ye~~~~p~r~ 82 (712)
T KOG2237|consen 3 PLQYPVARKDESVAEDFHGVTVEDPYRWLEDPDDTEMKEFVEAENKYTDAVLEDTETKEKLFSEMTKRIDYEIITPPLRW 82 (712)
T ss_pred CCCCCCcccccchhhhcCCceecCcchhhcCCcHHHHHHHHHHhhhhhHHHHhccHHHHHHHHHhhhccCccccCCcccc
Confidence 45688888877679999999999999999999999999999999999999999997777999999999999999999999
Q ss_pred CCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc
Q 004766 90 GNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI 169 (732)
Q Consensus 90 g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~ 169 (732)
|++|||.++.+++ |+++|+|+..+.++++++|+|.+..+++..+..-++|-|++++++.++..|+++..|.....+.|.
T Consensus 83 G~~yyY~~n~~lk-q~vl~~rr~~~~e~~~~ld~~~~~dd~tV~Ld~~~~aed~~Y~~~gls~~spD~~~ia~~~~~~~~ 161 (712)
T KOG2237|consen 83 GPWYYYFYNTGLK-QYVLYCRRLLEKEEEVFLDPNALGDDGTVLLDTNQIAEDFKYFAYGLSESSPDHKYIAYTKDTEGK 161 (712)
T ss_pred CCEEEEEEcCCce-ehhHHHHhhhhcccceecCCccCCCCceEEechhhhhhcCCceEEeecccCCCceEEEEEEcCCCC
Confidence 9999999999888 788998887655666666666665555444444444444444444444444444444444433333
Q ss_pred eecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeE
Q 004766 170 VEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGH 249 (732)
Q Consensus 170 ~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~ 249 (732)
.+.+.....+++.++|.+|++.++|.+....+ ..+.-.+..+...++++||+|.+|+.+.+|++++++.+++.+.....
T Consensus 162 e~~~~v~~~~~~~~~~~~~~~g~~y~~w~~~d-g~~l~~~t~~~~~r~hkvy~h~~Gtdq~~Dvl~~~e~d~~~~vf~~~ 240 (712)
T KOG2237|consen 162 ELFTVVIDVKFSGPVWTHDGKGVSYLAWAKQD-GEDLLYGTEDENNRPHKVYYHTLGTDQSEDVLLYEEKDEPKHVFISE 240 (712)
T ss_pred ccceeeeeeccCCceeeccCCceEeeeecccC-CceeeeeeeccccCcceEEEEecccCCCcceEEEecCCCCeEEEEEE
Confidence 33222333334445555555555554433211 11111223344689999999999999999999999999888877777
Q ss_pred EecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccc-ccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCce
Q 004766 250 VTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG-FKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYK 328 (732)
Q Consensus 250 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~ 328 (732)
.+.+|++++...+..++..+.+|.+|+.....+++. + .++...+.-+...+.++..++..++|++|.+++++.
T Consensus 241 ~kD~~~~~i~si~~t~s~~~~vf~~d~~~~~~gl~~~~------~~~v~~v~~f~eh~~fi~~~~t~~~~~tn~~~p~y~ 314 (712)
T KOG2237|consen 241 TKDSGFYTINSISETCSPVNKVFLCDLSSPSDGLELLI------LPRVKGVDCFVEHYDFITNEGTEFYFLTNKDAPNYY 314 (712)
T ss_pred EecCceEEEEEeeccCCccceEEEEecccccCCcchhe------eeccchhhhhhhhhhheeccCcceeeeccCCCCcee
Confidence 777777777777777766789999998775433221 1 112222333333344567788999999999999999
Q ss_pred EEEEeCCCC--CCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCc
Q 004766 329 IIRVDLKEP--NDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDS 406 (732)
Q Consensus 329 l~~~d~~~~--~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~ 406 (732)
+.++++..+ ..|++++++.+...+..+...+++.+++....+....+.+.++.+|..++.+++|.+++..+....+.+
T Consensus 315 l~r~~~~~~~~~~W~~v~~e~~~~vl~~~~~~~~~~ll~~~~~~l~~i~q~~~~l~g~~~~~fpLpv~sv~~~~g~~~~~ 394 (712)
T KOG2237|consen 315 LLRIDVKEPEESKWETVFAEHEKDVLEDVDMVNDNLLLVCYMSDLKHILQVRDLLDGSLLRSFPLPVGSVSGTSGDFKSS 394 (712)
T ss_pred EEeeeccCccccccceeecccchhhhhhhhhhcCceEEEEEecCchhhccccccccCceeeeecCCCCcccccccCCCCc
Confidence 999998776 369999998878888989888867777777777655555556556777789999999888887788889
Q ss_pred EEEEEEecCCCCceEEEEECCCCCCceEEEEeecC--CCCCCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEE
Q 004766 407 VVFISFTSFLIPGIVYQCNLKTETPEMKIFRETII--PGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCL 484 (732)
Q Consensus 407 ~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~v 484 (732)
+++|.++|+.+|+.+|.||++.++.+..++.+... |+|+.+.|.+++++++|+|| ++||++|++.++.+.+++.|++
T Consensus 395 ~~~f~~sS~l~P~~iy~yDl~~~~~e~~vf~e~~~~lpg~~~s~y~~~r~~~~SkDG-t~VPM~Iv~kk~~k~dg~~P~L 473 (712)
T KOG2237|consen 395 TIRFQFSSFLTPGSIYDYDLANGKPEPSVFREITVVLPGFDASDYVVERIEVSSKDG-TKVPMFIVYKKDIKLDGSKPLL 473 (712)
T ss_pred eEEEEEeccCCCCeEEEeeccCCCCCCcceeeeccccCcccccceEEEEEEEecCCC-CccceEEEEechhhhcCCCceE
Confidence 99999999999999999999988545566666554 78999999999999999999 9999999999998889999999
Q ss_pred EEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEE
Q 004766 485 LYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLC 564 (732)
Q Consensus 485 v~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~ 564 (732)
||+||||+.++.|.|..++..+++ +|++++.+|+|||||+|+.||+.|+..+|+|.|+||++|++||+++||+.|+|++
T Consensus 474 LygYGay~isl~p~f~~srl~lld-~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~ 552 (712)
T KOG2237|consen 474 LYGYGAYGISLDPSFRASRLSLLD-RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLA 552 (712)
T ss_pred EEEecccceeeccccccceeEEEe-cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCcccee
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHH---HHhcCcccCCCCCCCC
Q 004766 565 IEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYW---LIKYSPLHNVRRPWEQ 641 (732)
Q Consensus 565 i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~---~~~~sp~~~~~~~~~~ 641 (732)
+.|+|+||+|++++++++||+|+|+|+.|||+||++++.+++++.|..+||+..+|+.+++ +..|||++|+++.
T Consensus 553 i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q--- 629 (712)
T KOG2237|consen 553 IEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQ--- 629 (712)
T ss_pred EecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccCChhhhhhhheecccCccCCCchh---
Confidence 9999999999999999999999999999999999999999999999876655544444444 4555555555553
Q ss_pred CCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHH
Q 004766 642 NPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGF 721 (732)
Q Consensus 642 ~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 721 (732)
..||.|||+++++|+||+++|+.||+++||++.+.+++ +.+|+.+++.+++||+...++.+.+++.+..++|
T Consensus 630 -----~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~---q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaF 701 (712)
T KOG2237|consen 630 -----VQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLK---QTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAF 701 (712)
T ss_pred -----ccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchh---cCCCEEEEEecCCccccCCchHHHHHHHHHHHHH
Confidence 35999999999999999999999999999998766542 4589999999999999999999999999999999
Q ss_pred HHHHhCCCcC
Q 004766 722 MAKMLGASWV 731 (732)
Q Consensus 722 l~~~l~~~~~ 731 (732)
|.+.++..|.
T Consensus 702 l~K~~~~~~~ 711 (712)
T KOG2237|consen 702 LAKMLNSDWI 711 (712)
T ss_pred HHHHhcCccC
Confidence 9999998775
No 3
>PRK10115 protease 2; Provisional
Probab=100.00 E-value=2.3e-102 Score=877.92 Aligned_cols=665 Identities=24% Similarity=0.425 Sum_probs=564.5
Q ss_pred CCcccccCceeeeecCccccCCCccccCC--CCHHHHHHHHHHHHHHHHHHcCC-hhHHHHHHHHHhhcCCCCCCCcEEe
Q 004766 13 YPVARRDESVVDDYHGVKIVDPYRWLEDP--DAEEVKDFVQKQVELTDSVLKNC-DVRDKLREKITKLFDSPRYDAPFKR 89 (732)
Q Consensus 13 ~P~~~~~~~~~~~~~g~~~~D~y~wLed~--~~~~~~~~l~~qn~~t~~~l~~~-~~~~~l~~~~~~~~~~~~~~~p~~~ 89 (732)
||.|+++|+ ++++||++++|||+||||. ++|+|++||++||+||+++|+++ +++++|+++|++++..+++++|.+.
T Consensus 2 pP~a~~~~~-~~~~hg~~~~DpY~WLed~~r~~~~v~~~l~~en~~t~~~l~~~~~~~~~l~~~~~~~~~~~~~~~p~~~ 80 (686)
T PRK10115 2 LPKAARIPH-AMTLHGDTRIDNYYWLRDDTRSQPEVLDYLHQENSYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIK 80 (686)
T ss_pred cCCCCCCCe-eEEeCCCEeccCchHhhCCCCCCHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcccccCCCCEEE
Confidence 788999996 8999999999999999996 59999999999999999999996 9999999999999999999999999
Q ss_pred CCEEEEEEEcCCCCeeEEEEEeCC-C---CCceEEeCCCCcCCC-CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEE
Q 004766 90 GNKYFYFHNTGLQPQSVLYVQDSL-D---AKAKVLLDPNTLSDD-GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMR 164 (732)
Q Consensus 90 g~~~~~~~~~~~~~~~~l~~r~~~-~---~~~~~l~D~~~l~~~-~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 164 (732)
|+++||+++..+. ++.||+|... + +.+++|||+|+++++ +++.++.+.|||||++|||+.+.+|+|+++|+++|
T Consensus 81 g~~~y~~~~~~g~-~~~~~~r~~~~~~~~~~~~~llD~n~~a~~~~~~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d 159 (686)
T PRK10115 81 NGYRYRHIYEPGC-EYAIYQRQSAFSEEWDEWETLLDANKRAAHSEFYTLGGMAITPDNTIMALAEDFLSRRQYGIRFRN 159 (686)
T ss_pred CCEEEEEEEcCCC-ccEEEEEecCCCCCCCCCEEEEcchhhccCCCcEEEeEEEECCCCCEEEEEecCCCcEEEEEEEEE
Confidence 9998888876665 4778887753 2 347999999999644 67999999999999999999999999999999999
Q ss_pred CCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCee
Q 004766 165 IEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKY 244 (732)
Q Consensus 165 l~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~ 244 (732)
+.+|+.+++.+.+++ ..++|++|++.|+|++.+.. ..++.+||+|++||++.++.+|+++.++..
T Consensus 160 ~~tg~~l~~~i~~~~-~~~~w~~D~~~~~y~~~~~~-------------~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~- 224 (686)
T PRK10115 160 LETGNWYPELLDNVE-PSFVWANDSWTFYYVRKHPV-------------TLLPYQVWRHTIGTPASQDELVYEEKDDTF- 224 (686)
T ss_pred CCCCCCCCccccCcc-eEEEEeeCCCEEEEEEecCC-------------CCCCCEEEEEECCCChhHCeEEEeeCCCCE-
Confidence 999997777777665 56999999999999987431 247789999999999888999999776543
Q ss_pred EEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCC
Q 004766 245 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDA 324 (732)
Q Consensus 245 ~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~ 324 (732)
......|.|++++++.+.... .++++++++.... ..++..+....+..+.. .+.++.||+.+|.++
T Consensus 225 ~~~~~~s~d~~~l~i~~~~~~--~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~-~~~~~~ly~~tn~~~ 290 (686)
T PRK10115 225 YVSLHKTTSKHYVVIHLASAT--TSEVLLLDAELAD-----------AEPFVFLPRRKDHEYSL-DHYQHRFYLRSNRHG 290 (686)
T ss_pred EEEEEEcCCCCEEEEEEECCc--cccEEEEECcCCC-----------CCceEEEECCCCCEEEE-EeCCCEEEEEEcCCC
Confidence 345666779999987776655 4667777753211 11122233333444443 355789999999999
Q ss_pred CCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEee--c
Q 004766 325 PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAIS--A 401 (732)
Q Consensus 325 ~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~--~ 401 (732)
++++|+.+++.+...|+.|+++.++..|+++.++. ++|++...+++.++|+++++.+++ ...|+++ ...+..+. .
T Consensus 291 ~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~l~~~~~~~g~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~~ 368 (686)
T PRK10115 291 KNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFT-DWLVVEERQRGLTSLRQINRKTRE-VIGIAFDDPAYVTWIAYNP 368 (686)
T ss_pred CCceEEEecCCCcccCeEEECCCCCCEEEEEEEEC-CEEEEEEEeCCEEEEEEEcCCCCc-eEEecCCCCceEeeecccC
Confidence 99999999998544599999987667899999996 899999999999999999986444 3666643 22233333 3
Q ss_pred ccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEeecCCCCCCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCc
Q 004766 402 RREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSH 481 (732)
Q Consensus 402 s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~ 481 (732)
+++++.++++++|+++|+++|.+|+.+++ .++++....+.+++..+.+++++++|.|| ++||++++++++...+++.
T Consensus 369 ~~~~~~~~~~~ss~~~P~~~y~~d~~~~~--~~~l~~~~~~~~~~~~~~~e~v~~~s~DG-~~Ip~~l~~~~~~~~~~~~ 445 (686)
T PRK10115 369 EPETSRLRYGYSSMTTPDTLFELDMDTGE--RRVLKQTEVPGFDAANYRSEHLWITARDG-VEVPVSLVYHRKHFRKGHN 445 (686)
T ss_pred CCCCceEEEEEecCCCCCEEEEEECCCCc--EEEEEecCCCCcCccccEEEEEEEECCCC-CEEEEEEEEECCCCCCCCC
Confidence 46778899999999999999999998874 77888766666888889999999999999 9999999988775556788
Q ss_pred cEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCC
Q 004766 482 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSR 561 (732)
Q Consensus 482 P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 561 (732)
|+||++||||+.+..+.|++.++.|++ +||+|+++|+|||||||++|++++.+.+|.++++||++|++||+++|++||+
T Consensus 446 P~ll~~hGg~~~~~~p~f~~~~~~l~~-rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~ 524 (686)
T PRK10115 446 PLLVYGYGSYGASIDADFSFSRLSLLD-RGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPS 524 (686)
T ss_pred CEEEEEECCCCCCCCCCccHHHHHHHH-CCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChH
Confidence 999999999999999999999887777 9999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc---CCCCCccccccCCCCCHHHHHHHHhcCcccCCCCC
Q 004766 562 KLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK---FTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRP 638 (732)
Q Consensus 562 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~---~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~ 638 (732)
||+|+|+|+||+|++++++++|++|+|+|+.+|++|+++++. ++....|..|||+|.+++.+++|+++||++|+++.
T Consensus 525 rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~ 604 (686)
T PRK10115 525 LCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQ 604 (686)
T ss_pred HeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCcc
Confidence 999999999999999999999999999999999999998863 23334467899999999999999999999999983
Q ss_pred CCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHH
Q 004766 639 WEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADR 718 (732)
Q Consensus 639 ~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 718 (732)
.+|++||+||.+|+|||++|+.||+++|+++ .....++.+++.+++||+....+.+.+++.+..
T Consensus 605 ---------~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~-------~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~ 668 (686)
T PRK10115 605 ---------AYPHLLVTTGLHDSQVQYWEPAKWVAKLREL-------KTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAME 668 (686)
T ss_pred ---------CCCceeEEecCCCCCcCchHHHHHHHHHHhc-------CCCCceEEEEecCCCCCCCCcCHHHHHHHHHHH
Confidence 6777999999999999999999999999987 122334666666999999888888889999999
Q ss_pred HHHHHHHhCCCc
Q 004766 719 YGFMAKMLGASW 730 (732)
Q Consensus 719 ~~fl~~~l~~~~ 730 (732)
++||..+++..+
T Consensus 669 ~aFl~~~~~~~~ 680 (686)
T PRK10115 669 YAFLIALAQGTL 680 (686)
T ss_pred HHHHHHHhCCcC
Confidence 999999998764
No 4
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-98 Score=767.03 Aligned_cols=635 Identities=37% Similarity=0.621 Sum_probs=528.1
Q ss_pred ccCCCccccCCCCHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhcCCCCCCCcEEeCCEEEEEEEcCCCCeeEEEEE
Q 004766 31 IVDPYRWLEDPDAEEVKDFVQKQVELTDSVLKNCDVRDKLREKITKLFDSPRYDAPFKRGNKYFYFHNTGLQPQSVLYVQ 110 (732)
Q Consensus 31 ~~D~y~wLed~~~~~~~~~l~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~l~~r 110 (732)
.+|||+||||++++|+++|+++||+.|..+|...+.++.+.+++.+++..++++.|...++++|+++++..+++. +|+|
T Consensus 2 ~~DPy~wlEd~~~~eal~wv~~~N~~t~~~L~~~~~~a~~~~~~~~l~d~~~~~~~~~~~~~~ynFw~D~~~p~G-lwr~ 80 (648)
T COG1505 2 VPDPYRWLEDLDSAEALKWVEAQNAKTREFLGEDSARAASDKRLLELWDYEDIPIPFERGGRYYNFWQDALYPRG-LYRR 80 (648)
T ss_pred CCCcchhhhcCCcHHHHHHHHhhhhHHHHHhhcchhhHHHHHHHHHHhhccccCcceeccceeEEeeccccCcce-eEEe
Confidence 579999999999999999999999999999999999999999999999998899999999999999999888864 8998
Q ss_pred eCCC------CCceEEeCCCCcCCCC--CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeee
Q 004766 111 DSLD------AKAKVLLDPNTLSDDG--TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSS 182 (732)
Q Consensus 111 ~~~~------~~~~~l~D~~~l~~~~--~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~ 182 (732)
+..+ ++.++|+|+++|++.. .+.+++.+.+||+++++|+.+.+|++...++++|++||+.+.+. +..+.+
T Consensus 81 ttl~syrs~~p~WevLiD~d~Ls~~~g~~v~~~Gas~~~~~~R~l~s~S~gG~D~~~~re~Dlet~~fv~~~--~f~~~~ 158 (648)
T COG1505 81 TTLETYRSAKPEWEVLIDVDALSADLGDKVALGGASVLPDGTRLLYSLSIGGSDAGITREFDLETGEFVEEE--GFKFPG 158 (648)
T ss_pred ecceeecccCCCceeecCHHHHhhhcCCcEEEccceeCCCCCEEEEEecCCCCcceEEEEEEecccccccCC--Cccccc
Confidence 7543 5679999999998763 78899999999999999999999999999999999999877664 333456
Q ss_pred EEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEE---ECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 183 IAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYH---FLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 183 ~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
+.|..++ .++|++... .+..++++++..++++ ++.+++..++.|+...+.+.+.....+|.|+++.+.
T Consensus 159 ~~wld~d-~~~~~~~~~--------~~e~T~sGy~~~~~~~krg~~f~~~~~dv~V~a~~~~~~~~~~~~~~~~~~~f~~ 229 (648)
T COG1505 159 ISWLDDD-GVFVSRYWR--------PKEKTPSGYPRVVKRLKRGKLFEGQEGDVMVNARGDQDPWGFRLVLSEDGDFFML 229 (648)
T ss_pred eEEecCC-CEEEecccC--------CcccCccCCchHhhhhhhcccccCCCCceEEecccccCCccceEEEeeccchhhh
Confidence 9999777 777876544 3344556777655444 455677778888766554444455666666666544
Q ss_pred EEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCC
Q 004766 260 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND 339 (732)
Q Consensus 260 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 339 (732)
...-..+....++ +++-+. . ...+..++.....++.....+...+++.+.... ..+..
T Consensus 230 ~~~~~~~~~~~~~-l~~p~~-~----------~~~~~~l~~~~r~dw~~~~~~~g~l~l~~~e~~----------~~g~~ 287 (648)
T COG1505 230 SLWLGTSGKGLIK-LGLPDK-V----------GYEWGKLVNTLRADWTFADVDYGLLYLLTDEDL----------ELGKV 287 (648)
T ss_pred eeeEeccCCCcee-ccCCcc-c----------cceeeeeeEeecccccccCcccceEEEEehhcc----------ccCce
Confidence 4332222222333 222110 0 111223332222222222222234444433322 22222
Q ss_pred ceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEeecccCCcEEEEEEecCCCC
Q 004766 340 WFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFISFTSFLIP 418 (732)
Q Consensus 340 ~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~d~~~l~~~~ss~~~p 418 (732)
...++|.. ...++++.+++ +++++...+|..+++.+++.. |...+.|.++ .+.+..++.+.+++.+++.+++|++|
T Consensus 288 ~a~~~P~~-~~~le~v~tt~-~~~va~~l~nv~~~l~v~~~~-g~~~~~v~l~~~ga~~~~~~~~~g~ev~l~~t~F~tP 364 (648)
T COG1505 288 IAEFIPEE-EQSLEQVVTTK-DKLVAGTLDNVSGRLEVYDLK-GERIEEVELPPPGALGMGSADKDGDEVFLAFTSFTTP 364 (648)
T ss_pred eEEecCCc-ccceeeeEEEc-CeEEeeeehhccceEEEeccC-ceEeeecccCCccceeeccCCCCCcEEEEEeecccCC
Confidence 33455554 68899999998 899999999999999999986 7777888887 77776566777899999999999999
Q ss_pred ceEEEEECCCCCCceEEEEeecCCCCCCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCC
Q 004766 419 GIVYQCNLKTETPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPS 498 (732)
Q Consensus 419 ~~~y~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~ 498 (732)
+++|++++.+++ +++++.+.. .||++++++++.+.+|.|| ++||++|++ |+.+.+ ++|++||+||||+.+..|.
T Consensus 365 ~~~~r~~~~~~e--Le~ik~~p~-~FDa~~~~veQ~~atSkDG-T~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP~ 438 (648)
T COG1505 365 STLYRLDLFGGE--LEVIREQPV-QFDADNYEVEQFFATSKDG-TRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTPR 438 (648)
T ss_pred CceEEEecCCce--ehhhhhccC-CcCccCceEEEEEEEcCCC-ccccEEEEe-cCCcCC-CCceEEEeccccccccCCc
Confidence 999999998885 777776433 6999999999999999999 999999999 887777 9999999999999999999
Q ss_pred cChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHH
Q 004766 499 FSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGAC 578 (732)
Q Consensus 499 ~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~ 578 (732)
|++.+..||+ +|++++++|+|||||||++||+++++.+++|.|+||+|+++.|+++|++.|++|+|+|+|+||+|++++
T Consensus 439 fs~~~~~WLe-rGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~a 517 (648)
T COG1505 439 FSGSRKLWLE-RGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAA 517 (648)
T ss_pred cchhhHHHHh-cCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEee
Confidence 9999988888 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeC
Q 004766 579 INQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD 658 (732)
Q Consensus 579 ~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~ 658 (732)
++|+||+|.|+||.+|++||++++.++.|..|+.|||+|++|+++..|.+||||+|++.. +.|||+||++|.
T Consensus 518 lTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g--------~kYP~~LITTs~ 589 (648)
T COG1505 518 LTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPG--------QKYPPTLITTSL 589 (648)
T ss_pred eccChhhhCceeeccchhhhhhhcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCcc--------ccCCCeEEEccc
Confidence 999999999999999999999999999999999999999999999999999999999986 689999999999
Q ss_pred CCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 659 HDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 659 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
+|+||+|+|++||+++|+++ +.|+.+++..++||+...+..+.+++.+..++||.+.|+
T Consensus 590 ~DDRVHPaHarKfaa~L~e~----------~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 590 HDDRVHPAHARKFAAKLQEV----------GAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTLG 648 (648)
T ss_pred ccccccchHHHHHHHHHHhc----------CCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999998 899999999999999999988889999999999999885
No 5
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=100.00 E-value=2.5e-54 Score=469.75 Aligned_cols=404 Identities=34% Similarity=0.577 Sum_probs=325.1
Q ss_pred CCcccccCceeeeecCccccCCCccccCCCCHHHHHHHHHHHHHHHHHHcCC-hhHHHHHHHHHhhcCCCCCCCcEEeCC
Q 004766 13 YPVARRDESVVDDYHGVKIVDPYRWLEDPDAEEVKDFVQKQVELTDSVLKNC-DVRDKLREKITKLFDSPRYDAPFKRGN 91 (732)
Q Consensus 13 ~P~~~~~~~~~~~~~g~~~~D~y~wLed~~~~~~~~~l~~qn~~t~~~l~~~-~~~~~l~~~~~~~~~~~~~~~p~~~g~ 91 (732)
||++++.|+ ++++||+++.|||+||||.++|+|++||++||+||+++|+++ ++++.|+++|++++..++.++|.+.|+
T Consensus 1 P~~~~~~~~-~~~~hg~~~~DpY~WLed~~~~~v~~~~~~en~~t~~~l~~~~~~~~~l~~~~~~~~~~~~~~~p~~~g~ 79 (414)
T PF02897_consen 1 PPTARKPPV-VETLHGVTITDPYRWLEDDDSPEVLAWLKAENAYTEAYLAQLKPLREKLYEELKARINEDRESVPVRRGG 79 (414)
T ss_dssp S-TTS-TTS-EEEETTEEEE-TTGGGGSTTSHHHHHHHHHHHHHHHHHHHTSHTCHHHHHHHHHHHCSSSEE---EEETT
T ss_pred CCCCCCCCe-eeecCCCEeecCchhhcCCCCHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHhhccCCCccccEEECC
Confidence 566666666 899999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred EEEEEEEcCCCCeeEEEEEeCC--CCC-ceEEeCCCCcCCCC-CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC
Q 004766 92 KYFYFHNTGLQPQSVLYVQDSL--DAK-AKVLLDPNTLSDDG-TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED 167 (732)
Q Consensus 92 ~~~~~~~~~~~~~~~l~~r~~~--~~~-~~~l~D~~~l~~~~-~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~ 167 (732)
++||.++.++++++++|||... +++ +++|||+|++++++ .+.++.+++||||++|||+.+.+|+|+++|+|+|+++
T Consensus 80 ~~y~~~~~~~~~~~~~~r~~~~~~~~~~~evllD~n~l~~~~~~~~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~t 159 (414)
T PF02897_consen 80 YYYYSRNQGGKNYPVLYRRKTDEEDGPEEEVLLDPNELAKDGGYVSLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLET 159 (414)
T ss_dssp EEEEEEE-SS-SS-EEEEEETTS-TS-C-EEEEEGGGGSTTSS-EEEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTT
T ss_pred eEEEEEEcCCCceEEEEEEecccCCCCceEEEEcchHhhccCceEEeeeeeECCCCCEEEEEecCCCCceEEEEEEECCC
Confidence 9999999888888989999876 355 49999999999876 6777899999999999999999999999999999999
Q ss_pred CceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEE
Q 004766 168 QIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFS 247 (732)
Q Consensus 168 g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~ 247 (732)
|+.+++.+.++.+.+++|++||+.|+|++.+..... .+..++.+||+|++|++..++++||++++++.+..+
T Consensus 160 g~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~--------~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~ 231 (414)
T PF02897_consen 160 GKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRT--------SDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVS 231 (414)
T ss_dssp TEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS---------CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEE
T ss_pred CcCcCCcccccccceEEEeCCCCEEEEEEeCccccc--------ccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEE
Confidence 998888777776556999999999999997763210 024568999999999999999999999887653678
Q ss_pred eEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCc
Q 004766 248 GHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKY 327 (732)
Q Consensus 248 ~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~ 327 (732)
+.+|+||++|++.+..+.+ .+++|++++..+.. ....++.+..........+.+.|+.||+++|.+++++
T Consensus 232 ~~~s~d~~~l~i~~~~~~~-~s~v~~~d~~~~~~---------~~~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~ 301 (414)
T PF02897_consen 232 VSRSKDGRYLFISSSSGTS-ESEVYLLDLDDGGS---------PDAKPKLLSPREDGVEYYVDHHGDRLYILTNDDAPNG 301 (414)
T ss_dssp EEE-TTSSEEEEEEESSSS-EEEEEEEECCCTTT---------SS-SEEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-
T ss_pred EEecCcccEEEEEEEcccc-CCeEEEEeccccCC---------CcCCcEEEeCCCCceEEEEEccCCEEEEeeCCCCCCc
Confidence 9999999999999888774 59999999987410 0223566666555555556667999999999999999
Q ss_pred eEEEEeCCCCC--Cce-EeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEeeccc
Q 004766 328 KIIRVDLKEPN--DWF-EVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARR 403 (732)
Q Consensus 328 ~l~~~d~~~~~--~~~-~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~ 403 (732)
+|+.++++... .|. .++++.++..+.++..++ ++|++..++++.++|+++++..+.....+.++ .+.+..++.++
T Consensus 302 ~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~-~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~ 380 (414)
T PF02897_consen 302 RLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFK-DYLVLSYRENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDF 380 (414)
T ss_dssp EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEET-TEEEEEEEETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-T
T ss_pred EEEEecccccccccceeEEcCCCCceeEEEEEEEC-CEEEEEEEECCccEEEEEECCCCcEEeeecCCcceEEeccCCCC
Confidence 99999998876 355 677777667899999988 89999999999999999999735544677776 67777888889
Q ss_pred CCcEEEEEEecCCCCceEEEEECCCCCCceEEEEe
Q 004766 404 EDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRE 438 (732)
Q Consensus 404 d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~ 438 (732)
+++.++|+++|+++|+++|.||+.+++ .+++++
T Consensus 381 ~~~~~~~~~ss~~~P~~~y~~d~~t~~--~~~~k~ 413 (414)
T PF02897_consen 381 DSDELRFSYSSFTTPPTVYRYDLATGE--LTLLKQ 413 (414)
T ss_dssp T-SEEEEEEEETTEEEEEEEEETTTTC--EEEEEE
T ss_pred CCCEEEEEEeCCCCCCEEEEEECCCCC--EEEEEe
Confidence 999999999999999999999999995 777765
No 6
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=7.4e-46 Score=417.32 Aligned_cols=530 Identities=17% Similarity=0.181 Sum_probs=360.4
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC---
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT--- 210 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~--- 210 (732)
...+.|||||+.++|....+ ....++|+.+.. | .+..... ....+.|+|+|+.+.+........ ..+.
T Consensus 62 ~~~~~~spdg~~~~~~~~~~-~~~~~l~l~~~~-g-~~~~~~~--~v~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~ 132 (620)
T COG1506 62 VSELRWSPDGSVLAFVSTDG-GRVAQLYLVDVG-G-LITKTAF--GVSDARWSPDGDRIAFLTAEGASK----RDGGDHL 132 (620)
T ss_pred ccccccCCCCCEEEEEeccC-CCcceEEEEecC-C-ceeeeec--ccccceeCCCCCeEEEEecccccc----cCCceee
Confidence 34778999999999998443 345799999987 5 2222222 237789999999999943221110 0000
Q ss_pred --------cccC-CcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCC--cceEEEEEEeCCCC
Q 004766 211 --------ETDS-NLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENC--DPVNKVYYCDLSAL 279 (732)
Q Consensus 211 --------~~~~-~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~~l~~~d~~~~ 279 (732)
.... .....+++.+.++ . . ... ...........+.++++.++....... ......++....++
T Consensus 133 ~~~~~~~~~~~~g~~~~~l~~~d~~~-~-~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (620)
T COG1506 133 FVDRLPVWFDGRGGERSDLYVVDIES-K-L--IKL--GLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNG 206 (620)
T ss_pred eecccceeecCCCCcccceEEEccCc-c-c--ccc--cCCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCC
Confidence 0000 1223344444432 0 0 000 011122335566666777766654432 11233333332222
Q ss_pred CCCcccccccCCCCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCC----CCceEEEEeCCCCCCceEeccCCC----CC
Q 004766 280 PEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDA----PKYKIIRVDLKEPNDWFEVIPEAE----RD 350 (732)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~----~~~~l~~~d~~~~~~~~~l~~~~~----~~ 350 (732)
. ...++.+.. .....+.++|+.+++..+... ....++.++.+.+. ........+ ..
T Consensus 207 ~--------------~~~~~~~~~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~ 271 (620)
T COG1506 207 E--------------LESLTPGEGSISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGELGE-VDGDLSSGDDTRGAW 271 (620)
T ss_pred c--------------eEEEcCCCceeeeeeeCCCCCeeEEeccCCccCccccceEEEEeccccc-cceeeccCCcccCcH
Confidence 1 223333221 122347788998888777532 13345555523222 111111110 01
Q ss_pred ceeEEEEecCCEEEEEEec-CCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 351 VLESATAVNLNQMIVSYLS-DVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 351 ~l~~~~~~~~~~l~~~~~~-~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.+... .+++.+++...+ .+...+...+...+.. ..+..+.+.+..++. +++.+++.++++..|+++|.++. ..
T Consensus 272 ~~~~~--~~~~~~~~~~~~~~g~~~l~~~~~~~~~~-~~~~~~~~~v~~f~~--~~~~~~~~~s~~~~p~~i~~~~~-~~ 345 (620)
T COG1506 272 AVEGG--LDGDGLLFIATDGGGSSPLFRVDDLGGGV-EGLSGDDGGVPGFDV--DGRKLALAYSSPTEPPEIYLYDR-GE 345 (620)
T ss_pred Hhccc--cCCCcEEEEEecCCCceEEEEEeccCCce-eeecCCCceEEEEee--CCCEEEEEecCCCCccceEEEcC-CC
Confidence 11111 233566666665 5555555555432322 334444566766664 88999999999999999999997 22
Q ss_pred CCceEEEEeecCCCCCC-CCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHH
Q 004766 430 TPEMKIFRETIIPGFDR-SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMR 508 (732)
Q Consensus 430 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~ 508 (732)
...+.......+.. ....++.+++++.|| .+|+++++.|.++.+.+++|+||++||||.......|...++.++.
T Consensus 346 ---~~~~~~~~~~~~~~~~~~~~e~~~~~~~dG-~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~ 421 (620)
T COG1506 346 ---EAKLTSSNNSGLKKVKLAEPEPVTYKSNDG-ETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLAS 421 (620)
T ss_pred ---ceEEeecccccccccccCCceEEEEEcCCC-CEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhc
Confidence 22222212222222 234789999999999 9999999999998877789999999999988888888877666555
Q ss_pred hcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeE
Q 004766 509 HLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGC 588 (732)
Q Consensus 509 ~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a 588 (732)
+||+|+.+|+||+++||++|.++..++++...++|+++++++|.+.+++|++||+|+|+|+||+|+++++++.| +|+|
T Consensus 422 -~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a 499 (620)
T COG1506 422 -AGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKA 499 (620)
T ss_pred -CCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999977 8999
Q ss_pred EEEcCCcccccccccCCCCCccc--cc-cCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCc
Q 004766 589 ALAHVGVMDMLRYHKFTIGHAWV--SD-FGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVP 665 (732)
Q Consensus 589 ~v~~~p~~d~~~~~~~~~~~~~~--~~-~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~ 665 (732)
+++..+.+|++.+........+. .+ .+.+.. ..+.+.+.||+.++.+ +++|+||+||.+|.|||.
T Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~sp~~~~~~----------i~~P~LliHG~~D~~v~~ 567 (620)
T COG1506 500 AVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPE--DREKYEDRSPIFYADN----------IKTPLLLIHGEEDDRVPI 567 (620)
T ss_pred EEeccCcchhhhhccccchhhcCCHHHhCCCccc--ChHHHHhcChhhhhcc----------cCCCEEEEeecCCccCCh
Confidence 99999988877665432221111 11 122221 3345789999999998 899999999999999999
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 666 LHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 666 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
.|+++|+++|+.. |+++++++||++||++..+.+. ...+..+++|+.++++.
T Consensus 568 ~q~~~~~~aL~~~----------g~~~~~~~~p~e~H~~~~~~~~-~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 568 EQAEQLVDALKRK----------GKPVELVVFPDEGHGFSRPENR-VKVLKEILDWFKRHLKQ 619 (620)
T ss_pred HHHHHHHHHHHHc----------CceEEEEEeCCCCcCCCCchhH-HHHHHHHHHHHHHHhcC
Confidence 9999999999998 9999999999999999987764 78999999999999874
No 7
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8e-34 Score=292.31 Aligned_cols=334 Identities=19% Similarity=0.198 Sum_probs=258.2
Q ss_pred CEEEEEEecCCe--eEEEEEeCC-CCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEE
Q 004766 361 NQMIVSYLSDVK--YVLQIRDLK-NGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFR 437 (732)
Q Consensus 361 ~~l~~~~~~~g~--~~l~~~d~~-~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~ 437 (732)
.-+||....++. .+||+.... .|+. .+++-+..+. ...++-+=+.++..++|-..|+.+..|.+.+++. ..+.+
T Consensus 516 ~LVYf~gt~d~PlE~hLyvvsye~~g~~-~rlt~~g~sh-~~~l~~~~d~fv~~~~sv~sP~cv~~y~ls~~~~-~~l~~ 592 (867)
T KOG2281|consen 516 KLVYFVGTKDTPLEHHLYVVSYENPGEI-ARLTEPGYSH-SCELDQQCDHFVSYYSSVGSPPCVSLYSLSWPEN-DPLPK 592 (867)
T ss_pred eEEEEEccCCCCceeeEEEEEEecCCce-eeccCCCccc-chhhhhhhhhHhhhhhcCCCCceEEEEeccCCcc-Ccccc
Confidence 346777777764 589998887 5665 6777442221 2223333344666778889999999998876641 11222
Q ss_pred eec-----C-CCCCCCCceE-EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC-CCcCh---hHHHH
Q 004766 438 ETI-----I-PGFDRSEFHV-HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSV---SRTIL 506 (732)
Q Consensus 438 ~~~-----~-~~~~~~~~~~-~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~-~~~~~---~~~~~ 506 (732)
+.. . ....+.+|.. +-+.+.++.| ..+.+.++.|.++++.+++|+++++|||++.+.. ..|.. .+...
T Consensus 593 q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg-~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~ 671 (867)
T KOG2281|consen 593 QVSFWAILVSGAPPPPDYVPPEIFSFQSKTG-LTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCR 671 (867)
T ss_pred hhhHHHHHHhcCCCCCccCChhheeeecCCC-cEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhh
Confidence 110 0 0112234533 6678888888 9999999999999999999999999999998653 34432 23556
Q ss_pred HHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHc-CCCCCCcEEEEecChhHHHHHHHHhhCCCe
Q 004766 507 MRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACINQRPDL 585 (732)
Q Consensus 507 l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~ 585 (732)
|+.+||+|+++|-||+--.|..|....++..++..++|.+.++++|+++ |++|.+||+|.|||+||+|+++.+.++|+.
T Consensus 672 LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~I 751 (867)
T KOG2281|consen 672 LASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNI 751 (867)
T ss_pred hhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcce
Confidence 7779999999999999999999999999999999999999999999998 599999999999999999999999999999
Q ss_pred eeEEEEcCCcccccccccCCCCCcccccc-CCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCe-EEEEeeCCCCCC
Q 004766 586 FGCALAHVGVMDMLRYHKFTIGHAWVSDF-GCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPS-TLLLTADHDDRV 663 (732)
Q Consensus 586 f~a~v~~~p~~d~~~~~~~~~~~~~~~~~-g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p-~Li~~g~~D~~v 663 (732)
|+++|+++|+.+|.-+.. .+++.| |-|+..+.. +.+-|-..++.++ ...|. +|++||.-|..|
T Consensus 752 frvAIAGapVT~W~~YDT-----gYTERYMg~P~~nE~g--Y~agSV~~~Vekl--------pdepnRLlLvHGliDENV 816 (867)
T KOG2281|consen 752 FRVAIAGAPVTDWRLYDT-----GYTERYMGYPDNNEHG--YGAGSVAGHVEKL--------PDEPNRLLLVHGLIDENV 816 (867)
T ss_pred eeEEeccCcceeeeeecc-----cchhhhcCCCccchhc--ccchhHHHHHhhC--------CCCCceEEEEecccccch
Confidence 999999999999976654 233444 667544432 3444556666664 13344 999999999999
Q ss_pred CchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 664 VPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 664 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
++.|.-.++.+|-++ |+|.++++||++.|+..++... +...++++.||.+
T Consensus 817 HF~Hts~Lvs~lvka----------gKpyeL~IfP~ERHsiR~~es~-~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 817 HFAHTSRLVSALVKA----------GKPYELQIFPNERHSIRNPESG-IYYEARLLHFLQE 866 (867)
T ss_pred hhhhHHHHHHHHHhC----------CCceEEEEccccccccCCCccc-hhHHHHHHHHHhh
Confidence 999999999999998 9999999999999999887664 6777889999865
No 8
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=100.00 E-value=4.4e-34 Score=281.30 Aligned_cols=209 Identities=31% Similarity=0.457 Sum_probs=173.8
Q ss_pred CCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHH
Q 004766 497 PSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVG 576 (732)
Q Consensus 497 ~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~ 576 (732)
|+|+. ..++|+++||+|+.+|+||+++||.+|+..+....+...++|+++++++|++++.+|++||+|+|+|+||++++
T Consensus 1 ~~f~~-~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~ 79 (213)
T PF00326_consen 1 PSFNW-NAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLAL 79 (213)
T ss_dssp ---SH-HHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHH
T ss_pred CeeeH-HHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccc
Confidence 46774 45778779999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCeeeEEEEcCCcccccccccCCC--CCccccccCCC-CCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEE
Q 004766 577 ACINQRPDLFGCALAHVGVMDMLRYHKFTI--GHAWVSDFGCS-EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTL 653 (732)
Q Consensus 577 ~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~--~~~~~~~~g~p-~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~L 653 (732)
.+++++|++|+|+|+.+|++|+..+...+. ...+..+++++ ..++.+..+ ||+..+.+. .+++|+|
T Consensus 80 ~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~~~~~--------~~~~P~l 148 (213)
T PF00326_consen 80 LAATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYREL---SPISPADNV--------QIKPPVL 148 (213)
T ss_dssp HHHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHH---HHGGGGGGC--------GGGSEEE
T ss_pred hhhcccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhh---ccccccccc--------cCCCCEE
Confidence 999999999999999999999988765332 12234567777 455555444 455444431 1478999
Q ss_pred EEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 654 LLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 654 i~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
|+||++|.+||+.++.+++++|+++ |++++++++|++||++..+..+ .+...++++||.++|+.
T Consensus 149 i~hG~~D~~Vp~~~s~~~~~~L~~~----------g~~~~~~~~p~~gH~~~~~~~~-~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 149 IIHGENDPRVPPSQSLRLYNALRKA----------GKPVELLIFPGEGHGFGNPENR-RDWYERILDFFDKYLKK 212 (213)
T ss_dssp EEEETTBSSSTTHHHHHHHHHHHHT----------TSSEEEEEETT-SSSTTSHHHH-HHHHHHHHHHHHHHTT-
T ss_pred EEccCCCCccCHHHHHHHHHHHHhc----------CCCEEEEEcCcCCCCCCCchhH-HHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999998 9999999999999999988876 58999999999999985
No 9
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-30 Score=291.04 Aligned_cols=386 Identities=17% Similarity=0.215 Sum_probs=268.2
Q ss_pred EEecC-CeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEe-cCCEEEEEEecC--CeeEEEEEeCCCCc
Q 004766 309 IANDD-TVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAV-NLNQMIVSYLSD--VKYVLQIRDLKNGS 384 (732)
Q Consensus 309 ~s~dg-~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~-~~~~l~~~~~~~--g~~~l~~~d~~~g~ 384 (732)
++.|+ ..+++....+++...+.......+.....++... ........+. ..+.+++..... +..+|+.+++.++.
T Consensus 347 ~~~d~~~~~~~~~~~~~~~~hi~~~~~~~~~~~~~lt~g~-w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~~~~~ 425 (755)
T KOG2100|consen 347 FSSDGSSYLKVDSVSDGGYNHIAYLKLSNGSEPRMLTSGN-WEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISLGSGT 425 (755)
T ss_pred EeecCCceeEEEeeccCCEEEEEEEEcCCCCccccccccc-eEEEEeccccCCCceEEEEecCCCCCceEEEEEEccccc
Confidence 45555 3444444444433455555554442223333332 1111122222 236788877774 55688888887555
Q ss_pred eeeecccc----cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCC--ceEEEEe-ecCC----CCCCCCceEEE
Q 004766 385 LLHQLPIE----IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETP--EMKIFRE-TIIP----GFDRSEFHVHQ 453 (732)
Q Consensus 385 ~~~~l~~~----~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~--~~~~l~~-~~~~----~~~~~~~~~~~ 453 (732)
. ..++-. .+...+++++.....+++..+.+..|.. .+...+.+. ....|.. ..+. .+.......+.
T Consensus 426 ~-~~lt~~~~~~~~~~~~~~~~~~~~~~v~~~~gP~~p~~--~~~~~~~~~~~~~~~Le~n~~~~~~~~~~~~p~~~~~~ 502 (755)
T KOG2100|consen 426 V-ESLTCSLITGPCTYLSVSFSKSAKYYVLSCSGPKVPDG--QLTRHSSKNSKTIVVLETNEELKKTIENVALPIVEFGK 502 (755)
T ss_pred c-ccccccCCCCcceEEEEecCCcccEEEEEccCCCCCcc--eeeccccccceEEEEeccChhhHHHhhcccCCcceeEE
Confidence 3 345432 2344455666667777777777777754 222111110 1112211 1111 11111223333
Q ss_pred EEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC-CCcChhH-HHHHHhcCcEEEEEcccCCCCCchhHHh
Q 004766 454 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSR-TILMRHLGAVFCIANIRGGGEYGEEWHK 531 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~-~~~~~~~-~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 531 (732)
+.+ || ....+.++.|+++.+.+++|+||..|||+++... ..|...+ ..++..+|++|+.+|+||+|++|..+..
T Consensus 503 i~~---~~-~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~ 578 (755)
T KOG2100|consen 503 IEI---DG-ITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRS 578 (755)
T ss_pred EEe---cc-EEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHH
Confidence 433 88 9999999999999888999999999999985332 3344333 3446779999999999999999999999
Q ss_pred cccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCC-CeeeEEEEcCCcccccccccCCCCCcc
Q 004766 532 GGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRP-DLFGCALAHVGVMDMLRYHKFTIGHAW 610 (732)
Q Consensus 532 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p-~~f~a~v~~~p~~d~~~~~~~~~~~~~ 610 (732)
+..+..+....+|.+.+++++++++++|++||+|+|+|+||+|++.++...| +.|+|+++.+|++|+. ++..+ +
T Consensus 579 ~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~----~ 653 (755)
T KOG2100|consen 579 ALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDST----Y 653 (755)
T ss_pred HhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eeccc----c
Confidence 9999999999999999999999999999999999999999999999999987 8999999999999998 54422 2
Q ss_pred cccc-CCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCC
Q 004766 611 VSDF-GCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT 689 (732)
Q Consensus 611 ~~~~-g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 689 (732)
.++| |.|.+.... +.+.+|..++... ..|-.|++||..|++|++.|+++++++|+.+ |
T Consensus 654 terymg~p~~~~~~--y~e~~~~~~~~~~---------~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~----------g 712 (755)
T KOG2100|consen 654 TERYMGLPSENDKG--YEESSVSSPANNI---------KTPKLLLIHGTEDDNVHFQQSAILIKALQNA----------G 712 (755)
T ss_pred cHhhcCCCccccch--hhhccccchhhhh---------ccCCEEEEEcCCcCCcCHHHHHHHHHHHHHC----------C
Confidence 3455 666333221 4566676666652 3344699999999999999999999999998 9
Q ss_pred CCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC
Q 004766 690 NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 690 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
+++.+.+||++.|++...... ...+..+..||..+++..
T Consensus 713 v~~~~~vypde~H~is~~~~~-~~~~~~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 713 VPFRLLVYPDENHGISYVEVI-SHLYEKLDRFLRDCFGSP 751 (755)
T ss_pred CceEEEEeCCCCcccccccch-HHHHHHHHHHHHHHcCcc
Confidence 999999999999999876653 577788899999877654
No 10
>PRK13604 luxD acyl transferase; Provisional
Probab=99.87 E-value=1.5e-20 Score=187.56 Aligned_cols=223 Identities=13% Similarity=0.082 Sum_probs=154.7
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCC-CCCchh
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGG-GEYGEE 528 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~-g~~g~~ 528 (732)
......+.+.|| .++.+|+..|++. ...+.|+||++||-.+.. .+...++.+|.++||.|+.+|.||+ |+.+.+
T Consensus 8 ~~~~~~~~~~dG-~~L~Gwl~~P~~~-~~~~~~~vIi~HGf~~~~---~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~ 82 (307)
T PRK13604 8 KTIDHVICLENG-QSIRVWETLPKEN-SPKKNNTILIASGFARRM---DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGT 82 (307)
T ss_pred cchhheEEcCCC-CEEEEEEEcCccc-CCCCCCEEEEeCCCCCCh---HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCc
Confidence 333445677899 9999999999853 246789999999965532 2234467778889999999999986 776655
Q ss_pred HHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCC
Q 004766 529 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGH 608 (732)
Q Consensus 529 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~ 608 (732)
+....... ...|+.++++||.+++ .++|++.|+||||.++..++.. + ..+++|+.+|+.++..+.......
T Consensus 83 ~~~~t~s~----g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~-~-~v~~lI~~sp~~~l~d~l~~~~~~ 153 (307)
T PRK13604 83 IDEFTMSI----GKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINE-I-DLSFLITAVGVVNLRDTLERALGY 153 (307)
T ss_pred cccCcccc----cHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcC-C-CCCEEEEcCCcccHHHHHHHhhhc
Confidence 54332211 2589999999998863 4689999999999998776664 3 389999999999965333210000
Q ss_pred -----ccc--cc---c-CCCC-CHHHHHHHHh------cCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHH
Q 004766 609 -----AWV--SD---F-GCSE-EEEEFYWLIK------YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLK 670 (732)
Q Consensus 609 -----~~~--~~---~-g~p~-~~~~~~~~~~------~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~ 670 (732)
.+. .+ | |.+- ....+..... .+|...+++ .+.|+|++||.+|+.||+.++.+
T Consensus 154 ~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~----------l~~PvLiIHG~~D~lVp~~~s~~ 223 (307)
T PRK13604 154 DYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKG----------LDIPFIAFTANNDSWVKQSEVID 223 (307)
T ss_pred ccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhh----------cCCCEEEEEcCCCCccCHHHHHH
Confidence 000 00 1 1110 0111111112 234455554 56899999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCch
Q 004766 671 LLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT 708 (732)
Q Consensus 671 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 708 (732)
++++++ ..+..++++++++|.+....
T Consensus 224 l~e~~~------------s~~kkl~~i~Ga~H~l~~~~ 249 (307)
T PRK13604 224 LLDSIR------------SEQCKLYSLIGSSHDLGENL 249 (307)
T ss_pred HHHHhc------------cCCcEEEEeCCCccccCcch
Confidence 999875 34679999999999997654
No 11
>PLN02442 S-formylglutathione hydrolase
Probab=99.86 E-value=1.4e-20 Score=192.48 Aligned_cols=246 Identities=11% Similarity=0.051 Sum_probs=161.7
Q ss_pred eEEEEEEEc-cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCC-----
Q 004766 450 HVHQVFVPS-KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGG----- 523 (732)
Q Consensus 450 ~~~~~~~~s-~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g----- 523 (732)
.++++.+.| .-| .++++.++.|+. ...+++|+|+++||..+......+......+++..|++|++||..+.|
T Consensus 17 ~~~~~~~~s~~l~-~~~~~~vy~P~~-~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~ 94 (283)
T PLN02442 17 FNRRYKHFSSTLG-CSMTFSVYFPPA-SDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEG 94 (283)
T ss_pred EEEEEEEeccccC-CceEEEEEcCCc-ccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCC
Confidence 455555655 356 799999999984 345689999999998776543333334456777789999999986544
Q ss_pred -------CCchhHHhccc-ccCCc-c----HHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEE
Q 004766 524 -------EYGEEWHKGGA-LAKKQ-N----CFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCAL 590 (732)
Q Consensus 524 -------~~g~~~~~~~~-~~~~~-~----~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v 590 (732)
++|..++.... ..++. . ..+++...++... ..+|+++++|+|+|+||++++.++.++|++|++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~ 172 (283)
T PLN02442 95 EADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNF--DQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVS 172 (283)
T ss_pred CccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHH--HhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEE
Confidence 11222221111 01100 1 1233333333322 23688999999999999999999999999999999
Q ss_pred EcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCch-HHH
Q 004766 591 AHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPL-HSL 669 (732)
Q Consensus 591 ~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~-~~~ 669 (732)
+.+|+.|+.... ... ......+|.+. +.++.+...+|+.++.. ..+|+|++||++|..|+.. ++.
T Consensus 173 ~~~~~~~~~~~~-~~~-~~~~~~~g~~~--~~~~~~d~~~~~~~~~~----------~~~pvli~~G~~D~~v~~~~~s~ 238 (283)
T PLN02442 173 AFAPIANPINCP-WGQ-KAFTNYLGSDK--ADWEEYDATELVSKFND----------VSATILIDQGEADKFLKEQLLPE 238 (283)
T ss_pred EECCccCcccCc-hhh-HHHHHHcCCCh--hhHHHcChhhhhhhccc----------cCCCEEEEECCCCccccccccHH
Confidence 999998854211 000 01112345432 22322333344444433 6789999999999999974 689
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 670 KLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 670 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
.++++|+++ |.++.++++++++|.+. .......+.+.|..+++.
T Consensus 239 ~~~~~l~~~----------g~~~~~~~~pg~~H~~~----~~~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 239 NFEEACKEA----------GAPVTLRLQPGYDHSYF----FIATFIDDHINHHAQALK 282 (283)
T ss_pred HHHHHHHHc----------CCCeEEEEeCCCCccHH----HHHHHHHHHHHHHHHHhc
Confidence 999999988 88999999999999865 233444556667666653
No 12
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.86 E-value=4.2e-20 Score=188.63 Aligned_cols=246 Identities=15% Similarity=0.101 Sum_probs=165.5
Q ss_pred eEEEEEEEcc-CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcc--cCCCCCc
Q 004766 450 HVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANI--RGGGEYG 526 (732)
Q Consensus 450 ~~~~~~~~s~-dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--rG~g~~g 526 (732)
..+...+.|. -| .++++.++.|++.. .++.|+|+++||..+......+......++++.|++|++||. ||.+..|
T Consensus 12 ~~~~~~~~s~~~~-~~~~~~v~~P~~~~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~ 89 (275)
T TIGR02821 12 TQGFYRHKSETCG-VPMTFGVFLPPQAA-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAG 89 (275)
T ss_pred EEEEEEEeccccC-CceEEEEEcCCCcc-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCC
Confidence 4455555554 55 78889999998743 356899999999877654444333445666667999999997 6665333
Q ss_pred ----------hhHHhcccc-cC--CccHHHHHHHHHHHHHHc-CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEc
Q 004766 527 ----------EEWHKGGAL-AK--KQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH 592 (732)
Q Consensus 527 ----------~~~~~~~~~-~~--~~~~~~D~~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~ 592 (732)
..|+..... .. .....+.+...+..+++. .-+|++|++|+|+||||++++.++.++|++|+++++.
T Consensus 90 ~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~ 169 (275)
T TIGR02821 90 EDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAF 169 (275)
T ss_pred CcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEE
Confidence 122211100 00 112233344455555544 3378899999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCc-hHHHHH
Q 004766 593 VGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVP-LHSLKL 671 (732)
Q Consensus 593 ~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~-~~~~~~ 671 (732)
+|+.+..... .. ...+...+|.+. +. +..++|...+.+. ...||+||.||.+|++|+. .++..+
T Consensus 170 ~~~~~~~~~~-~~-~~~~~~~l~~~~--~~---~~~~~~~~~~~~~--------~~~~plli~~G~~D~~v~~~~~~~~~ 234 (275)
T TIGR02821 170 APIVAPSRCP-WG-QKAFSAYLGADE--AA---WRSYDASLLVADG--------GRHSTILIDQGTADQFLDEQLRPDAF 234 (275)
T ss_pred CCccCcccCc-ch-HHHHHHHhcccc--cc---hhhcchHHHHhhc--------ccCCCeeEeecCCCcccCccccHHHH
Confidence 9998753210 00 000111233321 11 2244555444432 2578999999999999999 689999
Q ss_pred HHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 672 LATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 672 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
.++|+++ |.++++.++++++|++.. ........+.|..+++
T Consensus 235 ~~~l~~~----------g~~v~~~~~~g~~H~f~~----~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 235 EQACRAA----------GQALTLRRQAGYDHSYYF----IASFIADHLRHHAERL 275 (275)
T ss_pred HHHHHHc----------CCCeEEEEeCCCCccchh----HHHhHHHHHHHHHhhC
Confidence 9999988 999999999999999864 2345556677776653
No 13
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.85 E-value=9.5e-20 Score=199.09 Aligned_cols=295 Identities=16% Similarity=0.125 Sum_probs=205.2
Q ss_pred HHHHHHHHHcCChhHHHHHHHHHhhcCCCCCCCcEEeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCE
Q 004766 53 QVELTDSVLKNCDVRDKLREKITKLFDSPRYDAPFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTA 132 (732)
Q Consensus 53 qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~ 132 (732)
|+.++++++...+.+..+..++.+.+.....+.|...+++++|....+.+.+..||+++..+...+.|++.+..
T Consensus 118 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~------ 191 (417)
T TIGR02800 118 LQLLGKQYTVTASQLRRVAHRIADAIYEKLTGERGAFSTRIAYVSKSGKSRRYELQVADYDGANPQTITRSREP------ 191 (417)
T ss_pred EEeeeeeEEcCHHHHHHHHHHHHHHHHHHhcCCCCCcCCEEEEEEEeCCCCcceEEEEcCCCCCCEEeecCCCc------
Confidence 55666777766677788888888877766677777788898998876655677899988655667788876542
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
+..+.|||||++|||+...++. .+|+++|+++|+..... ..+. ...++|+|||+.|+|+....
T Consensus 192 -~~~p~~Spdg~~la~~~~~~~~--~~i~v~d~~~g~~~~~~~~~~~-~~~~~~spDg~~l~~~~~~~------------ 255 (417)
T TIGR02800 192 -ILSPAWSPDGQKLAYVSFESGK--PEIYVQDLATGQREKVASFPGM-NGAPAFSPDGSKLAVSLSKD------------ 255 (417)
T ss_pred -eecccCCCCCCEEEEEEcCCCC--cEEEEEECCCCCEEEeecCCCC-ccceEECCCCCEEEEEECCC------------
Confidence 3478899999999999866554 68999999998643322 2222 35689999999999985322
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
...+||+++++++....+ .. .......+.|+|||++|++.+.+.. ...||++++.++.
T Consensus 256 ----~~~~i~~~d~~~~~~~~l--~~---~~~~~~~~~~s~dg~~l~~~s~~~g--~~~iy~~d~~~~~----------- 313 (417)
T TIGR02800 256 ----GNPDIYVMDLDGKQLTRL--TN---GPGIDTEPSWSPDGKSIAFTSDRGG--SPQIYMMDADGGE----------- 313 (417)
T ss_pred ----CCccEEEEECCCCCEEEC--CC---CCCCCCCEEECCCCCEEEEEECCCC--CceEEEEECCCCC-----------
Confidence 235799999987654322 21 1122346789999999999876544 4579999987642
Q ss_pred CCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEec
Q 004766 292 LLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLS 369 (732)
Q Consensus 292 ~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~ 369 (732)
.+.+...... ....|+|||+.+++..... +.++|+.+|+.++. .+ ++.+.. ......++++ +.|++....
T Consensus 314 ---~~~l~~~~~~~~~~~~spdg~~i~~~~~~~-~~~~i~~~d~~~~~-~~-~l~~~~--~~~~p~~spdg~~l~~~~~~ 385 (417)
T TIGR02800 314 ---VRRLTFRGGYNASPSWSPDGDLIAFVHREG-GGFNIAVMDLDGGG-ER-VLTDTG--LDESPSFAPNGRMILYATTR 385 (417)
T ss_pred ---EEEeecCCCCccCeEECCCCCEEEEEEccC-CceEEEEEeCCCCC-eE-EccCCC--CCCCceECCCCCEEEEEEeC
Confidence 3344432221 2236899999888876643 57789999998865 33 444331 2344567764 568888888
Q ss_pred CCeeEEEEEeCCCCceeeecccccceeeEee
Q 004766 370 DVKYVLQIRDLKNGSLLHQLPIEIGSVNAIS 400 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~ 400 (732)
++...+++++.+ |+..+.++.+.+.+..++
T Consensus 386 ~~~~~l~~~~~~-g~~~~~~~~~~g~~~~~~ 415 (417)
T TIGR02800 386 GGRGVLGLVSTD-GRFRARLPLGNGDVREPA 415 (417)
T ss_pred CCcEEEEEEECC-CceeeECCCCCCCcCCCC
Confidence 888889998876 665577776666554443
No 14
>PRK10566 esterase; Provisional
Probab=99.85 E-value=3.3e-20 Score=187.62 Aligned_cols=229 Identities=14% Similarity=0.129 Sum_probs=150.3
Q ss_pred eEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCC-chhHHhccc--ccCCcc
Q 004766 464 KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEY-GEEWHKGGA--LAKKQN 540 (732)
Q Consensus 464 ~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~-g~~~~~~~~--~~~~~~ 540 (732)
.++...+.|.+. .+++.|+||++||..+... .|. .+...|+++||.|+++|+||.|.. +..-..... ......
T Consensus 11 ~~~~~~~~p~~~-~~~~~p~vv~~HG~~~~~~--~~~-~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~ 86 (249)
T PRK10566 11 GIEVLHAFPAGQ-RDTPLPTVFFYHGFTSSKL--VYS-YFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQ 86 (249)
T ss_pred CcceEEEcCCCC-CCCCCCEEEEeCCCCcccc--hHH-HHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHH
Confidence 455666777642 2356899999999766532 333 345666669999999999997642 110000000 000113
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEE-EcCCcccccccccCCCCCccccccCCCCC
Q 004766 541 CFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCAL-AHVGVMDMLRYHKFTIGHAWVSDFGCSEE 619 (732)
Q Consensus 541 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v-~~~p~~d~~~~~~~~~~~~~~~~~g~p~~ 619 (732)
..+|+.++++++.+++++|++||+++|+|+||++++.++.++|+...+++ +..+.........+. .... ..+..
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~ 161 (249)
T PRK10566 87 NMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFP--PLIP---ETAAQ 161 (249)
T ss_pred HHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcc--cccc---ccccc
Confidence 46888889999999988999999999999999999999998887654443 333332211100000 0000 01111
Q ss_pred ----HHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCC--CEE
Q 004766 620 ----EEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTN--PII 693 (732)
Q Consensus 620 ----~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~ 693 (732)
.+.+..+..+++...+.+. ...|+|++||.+|..||+.++.++.++|+.+ |. .+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i---------~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~----------g~~~~~~ 222 (249)
T PRK10566 162 QAEFNNIVAPLAEWEVTHQLEQL---------ADRPLLLWHGLADDVVPAAESLRLQQALRER----------GLDKNLT 222 (249)
T ss_pred HHHHHHHHHHHhhcChhhhhhhc---------CCCCEEEEEcCCCCcCCHHHHHHHHHHHHhc----------CCCcceE
Confidence 1112223445554444441 3579999999999999999999999999876 65 478
Q ss_pred EEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 694 GRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 694 ~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
++.++++||.+.. +....+.+||.++|
T Consensus 223 ~~~~~~~~H~~~~------~~~~~~~~fl~~~~ 249 (249)
T PRK10566 223 CLWEPGVRHRITP------EALDAGVAFFRQHL 249 (249)
T ss_pred EEecCCCCCccCH------HHHHHHHHHHHhhC
Confidence 9999999999752 35678899999875
No 15
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.84 E-value=1.7e-18 Score=186.98 Aligned_cols=285 Identities=13% Similarity=0.036 Sum_probs=180.8
Q ss_pred HHHHhhcCCCCCCCcEEeCCEEEEEEEcCCC----CeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcE--
Q 004766 72 EKITKLFDSPRYDAPFKRGNKYFYFHNTGLQ----PQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKY-- 145 (732)
Q Consensus 72 ~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~----~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~-- 145 (732)
.++.+.+...-.+.|..-+.++.|..+.... ....||+.+..+++++.|+..... ...++|||||+.
T Consensus 128 h~~~D~~~~~~tg~~g~~~~~iayv~~~~~~~~~~~~~~l~~~d~dG~~~~~lt~~~~~-------~~sP~wSPDG~~~~ 200 (428)
T PRK01029 128 HEAADTIHYALTGVPGISSGKIIFSLSTTNSDTELKQGELWSVDYDGQNLRPLTQEHSL-------SITPTWMHIGSGFP 200 (428)
T ss_pred HHHHHHHHHHHcCCCccccCEEEEEEeeCCcccccccceEEEEcCCCCCceEcccCCCC-------cccceEccCCCceE
Confidence 3343333333333344347888888764331 246799998766667777664332 247999999988
Q ss_pred EEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEE-
Q 004766 146 LAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYH- 223 (732)
Q Consensus 146 la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 223 (732)
++|++..+|. .+||++++.+|+....+ ..+. ...++|||||+.|+|+.... ....+|.+
T Consensus 201 ~~y~S~~~g~--~~I~~~~l~~g~~~~lt~~~g~-~~~p~wSPDG~~Laf~s~~~----------------g~~di~~~~ 261 (428)
T PRK01029 201 YLYVSYKLGV--PKIFLGSLENPAGKKILALQGN-QLMPTFSPRKKLLAFISDRY----------------GNPDLFIQS 261 (428)
T ss_pred EEEEEccCCC--ceEEEEECCCCCceEeecCCCC-ccceEECCCCCEEEEEECCC----------------CCcceeEEE
Confidence 5557766664 69999999999844322 2222 25799999999999987432 11235553
Q ss_pred -ECCCCC-CCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeec
Q 004766 224 -FLGTKQ-SEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG 301 (732)
Q Consensus 224 -~lgt~~-~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~ 301 (732)
++.++. .....+..... .....+.|||||++|+|.+.... ..+||++++.+.. ...+.++..
T Consensus 262 ~~~~~g~~g~~~~lt~~~~--~~~~~p~wSPDG~~Laf~s~~~g--~~~ly~~~~~~~g------------~~~~~lt~~ 325 (428)
T PRK01029 262 FSLETGAIGKPRRLLNEAF--GTQGNPSFSPDGTRLVFVSNKDG--RPRIYIMQIDPEG------------QSPRLLTKK 325 (428)
T ss_pred eecccCCCCcceEeecCCC--CCcCCeEECCCCCEEEEEECCCC--CceEEEEECcccc------------cceEEeccC
Confidence 443321 12223332211 12346899999999999876543 4679999875311 012334432
Q ss_pred cc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEe
Q 004766 302 FD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRD 379 (732)
Q Consensus 302 ~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d 379 (732)
.. .....|||||++|+|.+..++ ..+|+++|+++++ .+.++... .....+.|+++ +.|++....++...|++++
T Consensus 326 ~~~~~~p~wSPDG~~Laf~~~~~g-~~~I~v~dl~~g~-~~~Lt~~~--~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vd 401 (428)
T PRK01029 326 YRNSSCPAWSPDGKKIAFCSVIKG-VRQICVYDLATGR-DYQLTTSP--ENKESPSWAIDSLHLVYSAGNSNESELYLIS 401 (428)
T ss_pred CCCccceeECCCCCEEEEEEcCCC-CcEEEEEECCCCC-eEEccCCC--CCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 22 123469999999999887644 5689999999887 45555432 34567888875 4577777777778999999
Q ss_pred CCCCceeeecccccceeeEeeccc
Q 004766 380 LKNGSLLHQLPIEIGSVNAISARR 403 (732)
Q Consensus 380 ~~~g~~~~~l~~~~g~v~~~~~s~ 403 (732)
+++++. +.|+...+.+..++++|
T Consensus 402 l~~g~~-~~Lt~~~g~~~~p~Ws~ 424 (428)
T PRK01029 402 LITKKT-RKIVIGSGEKRFPSWGA 424 (428)
T ss_pred CCCCCE-EEeecCCCcccCceecC
Confidence 986665 66664455554555554
No 16
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.83 E-value=2.2e-18 Score=187.71 Aligned_cols=260 Identities=19% Similarity=0.151 Sum_probs=174.8
Q ss_pred CEEEEEEE-cCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc
Q 004766 91 NKYFYFHN-TGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI 169 (732)
Q Consensus 91 ~~~~~~~~-~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~ 169 (732)
.+..|... .+.+..+.||+.+..+...++|+..+.. +..++|||||++|+|+....|. .+||++|+.+|+
T Consensus 183 ~riayv~~~~~~~~~~~l~i~d~dG~~~~~l~~~~~~-------~~~p~wSPDG~~La~~s~~~g~--~~L~~~dl~tg~ 253 (448)
T PRK04792 183 TRIAYVVVNDKDKYPYQLMIADYDGYNEQMLLRSPEP-------LMSPAWSPDGRKLAYVSFENRK--AEIFVQDIYTQV 253 (448)
T ss_pred CEEEEEEeeCCCCCceEEEEEeCCCCCceEeecCCCc-------ccCceECCCCCEEEEEEecCCC--cEEEEEECCCCC
Confidence 35555543 3333346788877655556666654332 4579999999999999876554 689999999988
Q ss_pred eeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEe
Q 004766 170 VEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSG 248 (732)
Q Consensus 170 ~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~ 248 (732)
....+ ..+. ...++|||||+.|+|+.... ...+||++++.++... .+.. +......+
T Consensus 254 ~~~lt~~~g~-~~~~~wSPDG~~La~~~~~~----------------g~~~Iy~~dl~tg~~~--~lt~---~~~~~~~p 311 (448)
T PRK04792 254 REKVTSFPGI-NGAPRFSPDGKKLALVLSKD----------------GQPEIYVVDIATKALT--RITR---HRAIDTEP 311 (448)
T ss_pred eEEecCCCCC-cCCeeECCCCCEEEEEEeCC----------------CCeEEEEEECCCCCeE--ECcc---CCCCccce
Confidence 54322 2222 25789999999999986432 2357999999876533 2222 12234578
Q ss_pred EEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-cccceEEEEEecCCeEEEEeCCCCCCc
Q 004766 249 HVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDAQYEVIANDDTVFTFLTNKDAPKY 327 (732)
Q Consensus 249 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~s~~~~~~~ 327 (732)
.|||||++|++.+.+.. ..+||+++++++. .+.++. +.......|+|||+.|+|.+..+ ..+
T Consensus 312 ~wSpDG~~I~f~s~~~g--~~~Iy~~dl~~g~--------------~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~-g~~ 374 (448)
T PRK04792 312 SWHPDGKSLIFTSERGG--KPQIYRVNLASGK--------------VSRLTFEGEQNLGGSITPDGRSMIMVNRTN-GKF 374 (448)
T ss_pred EECCCCCEEEEEECCCC--CceEEEEECCCCC--------------EEEEecCCCCCcCeeECCCCCEEEEEEecC-Cce
Confidence 99999999999876544 4689999998753 334432 11112246999999999877653 467
Q ss_pred eEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeeccc
Q 004766 328 KIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARR 403 (732)
Q Consensus 328 ~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~ 403 (732)
+|+.+|++++. .+.+.... ......|+++ +.+++....++...|++++.+ |...+.++.+.+.+..++++|
T Consensus 375 ~I~~~dl~~g~-~~~lt~~~---~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~-G~~~~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 375 NIARQDLETGA-MQVLTSTR---LDESPSVAPNGTMVIYSTTYQGKQVLAAVSID-GRFKARLPAGQGEVKSPAWSP 446 (448)
T ss_pred EEEEEECCCCC-eEEccCCC---CCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECcCCCCCcCCCccCC
Confidence 89999998876 45444332 1224567765 567888888888899999986 766577776656555555554
No 17
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.83 E-value=7.7e-20 Score=187.63 Aligned_cols=243 Identities=19% Similarity=0.215 Sum_probs=159.2
Q ss_pred CCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCc
Q 004766 447 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 526 (732)
Q Consensus 447 ~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g 526 (732)
..+.+..+.|.+.+| ..|.++++.|++. .++.|+||..||..+.... +. ....+.. +||+|+.+|.||.|+..
T Consensus 52 ~~~~vy~v~f~s~~g-~~V~g~l~~P~~~--~~~~Pavv~~hGyg~~~~~--~~-~~~~~a~-~G~~vl~~d~rGqg~~~ 124 (320)
T PF05448_consen 52 PGVEVYDVSFESFDG-SRVYGWLYRPKNA--KGKLPAVVQFHGYGGRSGD--PF-DLLPWAA-AGYAVLAMDVRGQGGRS 124 (320)
T ss_dssp SSEEEEEEEEEEGGG-EEEEEEEEEES-S--SSSEEEEEEE--TT--GGG--HH-HHHHHHH-TT-EEEEE--TTTSSSS
T ss_pred CCEEEEEEEEEccCC-CEEEEEEEecCCC--CCCcCEEEEecCCCCCCCC--cc-ccccccc-CCeEEEEecCCCCCCCC
Confidence 456788899999999 9999999999953 4899999999997654221 11 2234445 99999999999998544
Q ss_pred hhHHh-----------cccccCCc-----cHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEE
Q 004766 527 EEWHK-----------GGALAKKQ-----NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCAL 590 (732)
Q Consensus 527 ~~~~~-----------~~~~~~~~-----~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v 590 (732)
++... .+...... +.+.|.+.++++|.++..+|++||+++|.|.||.++++++...| ++++++
T Consensus 125 ~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~ 203 (320)
T PF05448_consen 125 PDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAA 203 (320)
T ss_dssp -B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEE
T ss_pred CCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEE
Confidence 33211 11111011 34799999999999999999999999999999999999999965 699999
Q ss_pred EcCCcc-cccccccCCC-CCccc--c---ccCCC---CCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCC
Q 004766 591 AHVGVM-DMLRYHKFTI-GHAWV--S---DFGCS---EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHD 660 (732)
Q Consensus 591 ~~~p~~-d~~~~~~~~~-~~~~~--~---~~g~p---~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D 660 (732)
+.+|++ |..+...... ...|. . .+.++ ..++.++.|.=++....++. +++|+|+..|..|
T Consensus 204 ~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~r----------i~~pvl~~~gl~D 273 (320)
T PF05448_consen 204 ADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARR----------IKCPVLFSVGLQD 273 (320)
T ss_dssp EESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG------------SEEEEEEETT-
T ss_pred ecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHH----------cCCCEEEEEecCC
Confidence 999964 5444332221 11110 1 11222 23445555555566666665 8999999999999
Q ss_pred CCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 004766 661 DRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 661 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 725 (732)
+.|||.-....+++|. .+.++.+||..||...... .....+.||.+|
T Consensus 274 ~~cPP~t~fA~yN~i~-------------~~K~l~vyp~~~He~~~~~-----~~~~~~~~l~~~ 320 (320)
T PF05448_consen 274 PVCPPSTQFAAYNAIP-------------GPKELVVYPEYGHEYGPEF-----QEDKQLNFLKEH 320 (320)
T ss_dssp SSS-HHHHHHHHCC---------------SSEEEEEETT--SSTTHHH-----HHHHHHHHHHH-
T ss_pred CCCCchhHHHHHhccC-------------CCeeEEeccCcCCCchhhH-----HHHHHHHHHhcC
Confidence 9999999998888875 2489999999999875422 234577888765
No 18
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.82 E-value=1.6e-19 Score=169.73 Aligned_cols=231 Identities=18% Similarity=0.182 Sum_probs=165.6
Q ss_pred CCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCC
Q 004766 445 DRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGE 524 (732)
Q Consensus 445 ~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~ 524 (732)
.....++-.++|++.+| .+|.+|++.|+.- .++.|+||..||..+.... ...+..|.. .||+|+.+|.||.|+
T Consensus 50 ~~~~ve~ydvTf~g~~g-~rI~gwlvlP~~~--~~~~P~vV~fhGY~g~~g~---~~~~l~wa~-~Gyavf~MdvRGQg~ 122 (321)
T COG3458 50 TLPRVEVYDVTFTGYGG-ARIKGWLVLPRHE--KGKLPAVVQFHGYGGRGGE---WHDMLHWAV-AGYAVFVMDVRGQGS 122 (321)
T ss_pred cCCceEEEEEEEeccCC-ceEEEEEEeeccc--CCccceEEEEeeccCCCCC---ccccccccc-cceeEEEEecccCCC
Confidence 33456788899999999 9999999999874 3899999999997665432 223445555 999999999999887
Q ss_pred Cch------------hHHhcccccCC-----ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeee
Q 004766 525 YGE------------EWHKGGALAKK-----QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFG 587 (732)
Q Consensus 525 ~g~------------~~~~~~~~~~~-----~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~ 587 (732)
+.. .|+..|..+++ ...|.|+..+++-|.+...+|.+||++.|+|.||.|+++++...| +.+
T Consensus 123 ~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik 201 (321)
T COG3458 123 SSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIK 201 (321)
T ss_pred ccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhh
Confidence 632 13333333322 245899999999999999999999999999999999999999865 899
Q ss_pred EEEEcCCccc-ccccccCCCCCccccc---c---CCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCC
Q 004766 588 CALAHVGVMD-MLRYHKFTIGHAWVSD---F---GCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHD 660 (732)
Q Consensus 588 a~v~~~p~~d-~~~~~~~~~~~~~~~~---~---g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D 660 (732)
++++.+|++. ..+.........+ .| | -.|...+.++.|.=++- .|... .++.|+|+..|.-|
T Consensus 202 ~~~~~~Pfl~df~r~i~~~~~~~y-dei~~y~k~h~~~e~~v~~TL~yfD~-~n~A~---------RiK~pvL~svgL~D 270 (321)
T COG3458 202 AVVADYPFLSDFPRAIELATEGPY-DEIQTYFKRHDPKEAEVFETLSYFDI-VNLAA---------RIKVPVLMSVGLMD 270 (321)
T ss_pred cccccccccccchhheeecccCcH-HHHHHHHHhcCchHHHHHHHHhhhhh-hhHHH---------hhccceEEeecccC
Confidence 9999999863 3332222111111 11 1 12333333333322222 23333 48999999999999
Q ss_pred CCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc
Q 004766 661 DRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP 707 (732)
Q Consensus 661 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 707 (732)
+.|||.-....+++|.. +..+.+|+.-+|.....
T Consensus 271 ~vcpPstqFA~yN~l~~-------------~K~i~iy~~~aHe~~p~ 304 (321)
T COG3458 271 PVCPPSTQFAAYNALTT-------------SKTIEIYPYFAHEGGPG 304 (321)
T ss_pred CCCCChhhHHHhhcccC-------------CceEEEeeccccccCcc
Confidence 99999998888888753 35777888888987644
No 19
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.82 E-value=1.8e-18 Score=182.54 Aligned_cols=265 Identities=12% Similarity=0.046 Sum_probs=166.2
Q ss_pred CCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCC
Q 004766 445 DRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGE 524 (732)
Q Consensus 445 ~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~ 524 (732)
.+..+..+...+++.|| .+|.+....|.+. ..+.|+||++||..... ...|.. +...|.++||.|+++|+||.|.
T Consensus 26 ~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~--~~~~~~VvllHG~~~~~-~~~~~~-~~~~L~~~Gy~V~~~D~rGhG~ 100 (330)
T PLN02298 26 ALKGIKGSKSFFTSPRG-LSLFTRSWLPSSS--SPPRALIFMVHGYGNDI-SWTFQS-TAIFLAQMGFACFALDLEGHGR 100 (330)
T ss_pred hccCCccccceEEcCCC-CEEEEEEEecCCC--CCCceEEEEEcCCCCCc-ceehhH-HHHHHHhCCCEEEEecCCCCCC
Confidence 44455566667888899 9999988877542 23578999999975432 223332 3344565899999999999886
Q ss_pred CchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccC
Q 004766 525 YGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKF 604 (732)
Q Consensus 525 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~ 604 (732)
.... .+....-....+|+.+++++|....-.+..++.++|+|+||++++.++.++|++++++|+.+|+.++......
T Consensus 101 S~~~---~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 177 (330)
T PLN02298 101 SEGL---RAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRP 177 (330)
T ss_pred CCCc---cccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCC
Confidence 5321 1111112234688999999998654334457999999999999999999999999999999887653221100
Q ss_pred C--------CCCccccc---------cCC-CCCHHHHHHHHhcCcccCCCCC-----------CC-CCCCCCCCCCeEEE
Q 004766 605 T--------IGHAWVSD---------FGC-SEEEEEFYWLIKYSPLHNVRRP-----------WE-QNPDKPFQYPSTLL 654 (732)
Q Consensus 605 ~--------~~~~~~~~---------~g~-p~~~~~~~~~~~~sp~~~~~~~-----------~~-~~~~~~~~~~p~Li 654 (732)
. ....+... +.. ...+ ....+...+|....... .+ .......+..|+||
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLi 256 (330)
T PLN02298 178 PWPIPQILTFVARFLPTLAIVPTADLLEKSVKVP-AKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIV 256 (330)
T ss_pred chHHHHHHHHHHHHCCCCccccCCCcccccccCH-HHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEE
Confidence 0 00000000 000 0000 01111222222110000 00 00001137899999
Q ss_pred EeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCC--chHHHHHHHHHHHHHHHHHhCCCc
Q 004766 655 LTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGL--PTQKMIDEAADRYGFMAKMLGASW 730 (732)
Q Consensus 655 ~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~l~~~~ 730 (732)
+||.+|..||+.++.++++++.. ....+++++++||.... +..........+.+||.++++..+
T Consensus 257 i~G~~D~ivp~~~~~~l~~~i~~------------~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~ 322 (330)
T PLN02298 257 LHGSADVVTDPDVSRALYEEAKS------------EDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKA 322 (330)
T ss_pred EecCCCCCCCHHHHHHHHHHhcc------------CCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999888762 23588899999999753 332224566778999999987653
No 20
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.82 E-value=7.9e-18 Score=182.66 Aligned_cols=260 Identities=16% Similarity=0.110 Sum_probs=174.5
Q ss_pred CEEEEEEEcC-CCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc
Q 004766 91 NKYFYFHNTG-LQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI 169 (732)
Q Consensus 91 ~~~~~~~~~~-~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~ 169 (732)
.++.|..... +...+.||+.+..+...+.++..+. .+..++|||||++|||+....|. .+|+++|+.+|+
T Consensus 164 ~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~-------~~~~p~wSPDG~~la~~s~~~g~--~~i~i~dl~~G~ 234 (429)
T PRK03629 164 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQ-------PLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANGA 234 (429)
T ss_pred CeEEEEEeeCCCCcceeEEEEcCCCCCCEEeecCCC-------ceeeeEEcCCCCEEEEEEecCCC--cEEEEEECCCCC
Confidence 5677776533 3335679998865555666665432 24689999999999999765553 689999999987
Q ss_pred eeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEe
Q 004766 170 VEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSG 248 (732)
Q Consensus 170 ~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~ 248 (732)
....+ ..+ ....++|||||+.|+|+.... ...+||++++.++... .+... ......+
T Consensus 235 ~~~l~~~~~-~~~~~~~SPDG~~La~~~~~~----------------g~~~I~~~d~~tg~~~--~lt~~---~~~~~~~ 292 (429)
T PRK03629 235 VRQVASFPR-HNGAPAFSPDGSKLAFALSKT----------------GSLNLYVMDLASGQIR--QVTDG---RSNNTEP 292 (429)
T ss_pred eEEccCCCC-CcCCeEECCCCCEEEEEEcCC----------------CCcEEEEEECCCCCEE--EccCC---CCCcCce
Confidence 43322 222 236799999999999985322 2246999999776432 22222 2234578
Q ss_pred EEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCCCCc
Q 004766 249 HVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKY 327 (732)
Q Consensus 249 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~ 327 (732)
.|||||++|+|.+.+.. ..+||.++++++. .+.++.... .....|+|||+.|++.+..++ ..
T Consensus 293 ~wSPDG~~I~f~s~~~g--~~~Iy~~d~~~g~--------------~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g-~~ 355 (429)
T PRK03629 293 TWFPDSQNLAYTSDQAG--RPQVYKVNINGGA--------------PQRITWEGSQNQDADVSSDGKFMVMVSSNGG-QQ 355 (429)
T ss_pred EECCCCCEEEEEeCCCC--CceEEEEECCCCC--------------eEEeecCCCCccCEEECCCCCEEEEEEccCC-Cc
Confidence 99999999999886543 4689999988743 233433211 123468999999998877544 56
Q ss_pred eEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeeccc
Q 004766 328 KIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARR 403 (732)
Q Consensus 328 ~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~ 403 (732)
.|+.+|++++. .+.|.... ....+.|++|+ .+++...+.+...|++++++ |+..++|+...+.+..++++|
T Consensus 356 ~I~~~dl~~g~-~~~Lt~~~---~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~-G~~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 356 HIAKQDLATGG-VQVLTDTF---LDETPSIAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSP 427 (429)
T ss_pred eEEEEECCCCC-eEEeCCCC---CCCCceECCCCCEEEEEEcCCCceEEEEEECC-CCCeEECccCCCCcCCcccCC
Confidence 79999998876 55555322 23457788764 46666666666789999996 665567765455565555554
No 21
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.82 E-value=6.9e-18 Score=184.28 Aligned_cols=261 Identities=13% Similarity=0.086 Sum_probs=172.6
Q ss_pred CCEEEEEEEcCCC--CeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC
Q 004766 90 GNKYFYFHNTGLQ--PQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED 167 (732)
Q Consensus 90 g~~~~~~~~~~~~--~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~ 167 (732)
..+++|..+..+. ....||+.+..+...+.|+..+. .+..++|||||++|||+...+|. .+||++|+++
T Consensus 165 ~~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~-------~v~~p~wSpDG~~lay~s~~~g~--~~i~~~dl~~ 235 (435)
T PRK05137 165 DTRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTDGSS-------LVLTPRFSPNRQEITYMSYANGR--PRVYLLDLET 235 (435)
T ss_pred CCeEEEEEeeCCCCCcceEEEEECCCCCCcEEEecCCC-------CeEeeEECCCCCEEEEEEecCCC--CEEEEEECCC
Confidence 4577887654432 24678988765555566664432 25689999999999999876654 6999999999
Q ss_pred CceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEE
Q 004766 168 QIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFS 247 (732)
Q Consensus 168 g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~ 247 (732)
|+....+........++|||||+.|+|+.... ...+||++++.++... .+.. .......
T Consensus 236 g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~----------------g~~~Iy~~d~~~~~~~--~Lt~---~~~~~~~ 294 (435)
T PRK05137 236 GQRELVGNFPGMTFAPRFSPDGRKVVMSLSQG----------------GNTDIYTMDLRSGTTT--RLTD---SPAIDTS 294 (435)
T ss_pred CcEEEeecCCCcccCcEECCCCCEEEEEEecC----------------CCceEEEEECCCCceE--EccC---CCCccCc
Confidence 98543321111236789999999999986432 2357999999876432 2222 2233457
Q ss_pred eEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc-cceEEEEEecCCeEEEEeCCCCCC
Q 004766 248 GHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF-DAQYEVIANDDTVFTFLTNKDAPK 326 (732)
Q Consensus 248 ~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~s~~~~~~ 326 (732)
+.|||||++|+|.+.+.. ..+||++|++++. .+.++... ......|+|||+.|+|.+... ..
T Consensus 295 ~~~spDG~~i~f~s~~~g--~~~Iy~~d~~g~~--------------~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~-~~ 357 (435)
T PRK05137 295 PSYSPDGSQIVFESDRSG--SPQLYVMNADGSN--------------PRRISFGGGRYSTPVWSPRGDLIAFTKQGG-GQ 357 (435)
T ss_pred eeEcCCCCEEEEEECCCC--CCeEEEEECCCCC--------------eEEeecCCCcccCeEECCCCCEEEEEEcCC-Cc
Confidence 899999999999875543 4689999987743 34444321 112245999999999887643 35
Q ss_pred ceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCe---eEEEEEeCCCCceeeecccccceeeEeecc
Q 004766 327 YKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVK---YVLQIRDLKNGSLLHQLPIEIGSVNAISAR 402 (732)
Q Consensus 327 ~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~---~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s 402 (732)
++|+.+|++++. .+ ++... .....+.|++| +.|++.....+. ..|+++++++++. +.|+. .+.+..+.++
T Consensus 358 ~~i~~~d~~~~~-~~-~lt~~--~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~~-~~~~~~p~Ws 431 (435)
T PRK05137 358 FSIGVMKPDGSG-ER-ILTSG--FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVPT-PGDASDPAWS 431 (435)
T ss_pred eEEEEEECCCCc-eE-eccCC--CCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEccC-CCCccCcccC
Confidence 789999987665 33 33333 23567888876 456666665554 5899999974444 66653 3444444444
Q ss_pred c
Q 004766 403 R 403 (732)
Q Consensus 403 ~ 403 (732)
|
T Consensus 432 p 432 (435)
T PRK05137 432 P 432 (435)
T ss_pred C
Confidence 3
No 22
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.82 E-value=6.6e-18 Score=181.01 Aligned_cols=251 Identities=12% Similarity=0.082 Sum_probs=168.3
Q ss_pred EEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcE-EEEEEeccCCceEEEEEEECCCCcee
Q 004766 93 YFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKY-LAYALSYSGSDWATIKLMRIEDQIVE 171 (732)
Q Consensus 93 ~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~-la~~~~~~G~e~~~i~v~dl~~g~~~ 171 (732)
.|+.+..+. ....||+.+..+..+++++... . ...+.|||||++ ++|+...++. .+||++|+.+|+..
T Consensus 158 ~~v~~~~~~-~~~~l~~~d~dg~~~~~~~~~~-~-------~~~p~wSpDG~~~i~y~s~~~~~--~~Iyv~dl~tg~~~ 226 (419)
T PRK04043 158 VVFSKYTGP-KKSNIVLADYTLTYQKVIVKGG-L-------NIFPKWANKEQTAFYYTSYGERK--PTLYKYNLYTGKKE 226 (419)
T ss_pred EEEEEccCC-CcceEEEECCCCCceeEEccCC-C-------eEeEEECCCCCcEEEEEEccCCC--CEEEEEECCCCcEE
Confidence 444443333 3467999886555566655432 2 347999999997 5555544333 59999999999854
Q ss_pred cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEe
Q 004766 172 ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVT 251 (732)
Q Consensus 172 ~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~S 251 (732)
..+........+.|||||+.|+|+.... ...+||++++.++... .+... +.....+.||
T Consensus 227 ~lt~~~g~~~~~~~SPDG~~la~~~~~~----------------g~~~Iy~~dl~~g~~~--~LT~~---~~~d~~p~~S 285 (419)
T PRK04043 227 KIASSQGMLVVSDVSKDGSKLLLTMAPK----------------GQPDIYLYDTNTKTLT--QITNY---PGIDVNGNFV 285 (419)
T ss_pred EEecCCCcEEeeEECCCCCEEEEEEccC----------------CCcEEEEEECCCCcEE--EcccC---CCccCccEEC
Confidence 4332221235689999999999987432 2357999998776432 23222 2223468899
Q ss_pred cCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCC-----CC
Q 004766 252 EDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDA-----PK 326 (732)
Q Consensus 252 pDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~-----~~ 326 (732)
|||+.|+|.+.+.. ..+||++|++++. .++++..... ...|||||+.|+|.+.... ..
T Consensus 286 PDG~~I~F~Sdr~g--~~~Iy~~dl~~g~--------------~~rlt~~g~~-~~~~SPDG~~Ia~~~~~~~~~~~~~~ 348 (419)
T PRK04043 286 EDDKRIVFVSDRLG--YPNIFMKKLNSGS--------------VEQVVFHGKN-NSSVSTYKNYIVYSSRETNNEFGKNT 348 (419)
T ss_pred CCCCEEEEEECCCC--CceEEEEECCCCC--------------eEeCccCCCc-CceECCCCCEEEEEEcCCCcccCCCC
Confidence 99999999987654 5789999998754 2334332111 1369999999999887542 23
Q ss_pred ceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCCCCceeeecccccceee
Q 004766 327 YKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVN 397 (732)
Q Consensus 327 ~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~ 397 (732)
++|+.+|++++. .+.|+... ....+.|++| ..+++.....+...|++++++ |....+++...|.+.
T Consensus 349 ~~I~v~d~~~g~-~~~LT~~~---~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~-g~~~~~l~~~~g~~~ 415 (419)
T PRK04043 349 FNLYLISTNSDY-IRRLTANG---VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLN-YNKSFLFPLKVGKIQ 415 (419)
T ss_pred cEEEEEECCCCC-eEECCCCC---CcCCeEECCCCCEEEEEEccCCcEEEEEEecC-CCeeEEeecCCCccC
Confidence 789999998886 56666542 2345788886 457777777777889999997 654466665555553
No 23
>PRK10162 acetyl esterase; Provisional
Probab=99.82 E-value=3e-18 Score=178.40 Aligned_cols=238 Identities=15% Similarity=0.101 Sum_probs=161.6
Q ss_pred ceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCC-cChhHHHHHHhcCcEEEEEcccCCCCCch
Q 004766 449 FHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPS-FSVSRTILMRHLGAVFCIANIRGGGEYGE 527 (732)
Q Consensus 449 ~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~rG~g~~g~ 527 (732)
...+.+.+++.+| .|++.+++|+. ...|+|||+|||........ +......+....|+.|+.+|||...+.
T Consensus 55 ~~~~~~~i~~~~g--~i~~~~y~P~~----~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~-- 126 (318)
T PRK10162 55 MATRAYMVPTPYG--QVETRLYYPQP----DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA-- 126 (318)
T ss_pred ceEEEEEEecCCC--ceEEEEECCCC----CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC--
Confidence 3467778888787 59999999964 34699999999865433322 333233344436999999999987652
Q ss_pred hHHhcccccCCccHHHHHHHHHHHHHHc---CCCCCCcEEEEecChhHHHHHHHHhhC------CCeeeEEEEcCCcccc
Q 004766 528 EWHKGGALAKKQNCFDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQR------PDLFGCALAHVGVMDM 598 (732)
Q Consensus 528 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~p~~d~ 598 (732)
.....++|+.++++|+.++ --+|++||+|+|+|+||.|++.++.+. +..++++|+.+|++|+
T Consensus 127 ---------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 127 ---------RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred ---------CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 1234679999999999764 236899999999999999999888642 3578899999999886
Q ss_pred cccccCCCCCccccccCCC---CCHHHHHHHH---------hcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCch
Q 004766 599 LRYHKFTIGHAWVSDFGCS---EEEEEFYWLI---------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPL 666 (732)
Q Consensus 599 ~~~~~~~~~~~~~~~~g~p---~~~~~~~~~~---------~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~ 666 (732)
..... + ..++.. -..+..+++. ..+|+...... +.....||+||++|+.|..+ .
T Consensus 198 ~~~~s------~-~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~-----~l~~~lPp~~i~~g~~D~L~--d 263 (318)
T PRK10162 198 RDSVS------R-RLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNN-----DLTRDVPPCFIAGAEFDPLL--D 263 (318)
T ss_pred CCChh------H-HHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchh-----hhhcCCCCeEEEecCCCcCc--C
Confidence 32110 0 111110 0111111111 12333221000 00014699999999999876 5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc---hHHHHHHHHHHHHHHHHHhC
Q 004766 667 HSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 667 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~ 727 (732)
++..|+++|+++ |++++++++++..|++... ..+..+.+..+.+||.++|+
T Consensus 264 e~~~~~~~L~~a----------Gv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 264 DSRLLYQTLAAH----------QQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred hHHHHHHHHHHc----------CCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 899999999998 9999999999999998532 23345667778889988875
No 24
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.81 E-value=8.9e-18 Score=182.48 Aligned_cols=258 Identities=15% Similarity=0.113 Sum_probs=172.8
Q ss_pred CEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce
Q 004766 91 NKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV 170 (732)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~ 170 (732)
+++.|.....+ ...||..+..+...+.++..+. .+..++|||||++|||+....+. .+||++|+.+|+.
T Consensus 164 ~~iayv~~~~~--~~~L~~~D~dG~~~~~l~~~~~-------~v~~p~wSPDG~~la~~s~~~~~--~~I~~~dl~~g~~ 232 (427)
T PRK02889 164 TRIAYVIKTGN--RYQLQISDADGQNAQSALSSPE-------PIISPAWSPDGTKLAYVSFESKK--PVVYVHDLATGRR 232 (427)
T ss_pred cEEEEEEccCC--ccEEEEECCCCCCceEeccCCC-------CcccceEcCCCCEEEEEEccCCC--cEEEEEECCCCCE
Confidence 56777654322 3558887754444455554332 24589999999999999865443 6899999999975
Q ss_pred eccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeE
Q 004766 171 EADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGH 249 (732)
Q Consensus 171 ~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~ 249 (732)
...+ ..+ ....++|||||+.|+|+.... ...+||.+++.++... .+.. .......+.
T Consensus 233 ~~l~~~~g-~~~~~~~SPDG~~la~~~~~~----------------g~~~Iy~~d~~~~~~~--~lt~---~~~~~~~~~ 290 (427)
T PRK02889 233 RVVANFKG-SNSAPAWSPDGRTLAVALSRD----------------GNSQIYTVNADGSGLR--RLTQ---SSGIDTEPF 290 (427)
T ss_pred EEeecCCC-CccceEECCCCCEEEEEEccC----------------CCceEEEEECCCCCcE--ECCC---CCCCCcCeE
Confidence 4332 222 236799999999999975432 2357999988665422 2221 122335688
Q ss_pred EecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCCCCce
Q 004766 250 VTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYK 328 (732)
Q Consensus 250 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~ 328 (732)
|||||++|+|.+.+.. ..+||.+++.++. .+.++.... .....|||||+.|++.++.++ .+.
T Consensus 291 wSpDG~~l~f~s~~~g--~~~Iy~~~~~~g~--------------~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g-~~~ 353 (427)
T PRK02889 291 FSPDGRSIYFTSDRGG--APQIYRMPASGGA--------------AQRVTFTGSYNTSPRISPDGKLLAYISRVGG-AFK 353 (427)
T ss_pred EcCCCCEEEEEecCCC--CcEEEEEECCCCc--------------eEEEecCCCCcCceEECCCCCEEEEEEccCC-cEE
Confidence 9999999999875543 4679999987642 233332111 112469999999998887643 568
Q ss_pred EEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeeccc
Q 004766 329 IIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARR 403 (732)
Q Consensus 329 l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~ 403 (732)
|+++|+.++. .+.++... ..+.+.|+++ ..|++.....+...|++++++ |+..+.++.+.|.+..++++|
T Consensus 354 I~v~d~~~g~-~~~lt~~~---~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~~~p~wsp 424 (427)
T PRK02889 354 LYVQDLATGQ-VTALTDTT---RDESPSFAPNGRYILYATQQGGRSVLAAVSSD-GRIKQRLSVQGGDVREPSWGP 424 (427)
T ss_pred EEEEECCCCC-eEEccCCC---CccCceECCCCCEEEEEEecCCCEEEEEEECC-CCceEEeecCCCCCCCCccCC
Confidence 9999998876 45554332 2356788875 567788878888899999996 766567766666666666654
No 25
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.81 E-value=1.7e-18 Score=185.80 Aligned_cols=237 Identities=14% Similarity=0.027 Sum_probs=156.1
Q ss_pred ceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchh
Q 004766 449 FHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE 528 (732)
Q Consensus 449 ~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~ 528 (732)
+..+.+.++..+| ..|+++++.|+. +++.|+||+.|| ++......|.. +...|+++||+|+++|+||.|+...
T Consensus 166 ~~~e~v~i~~~~g-~~l~g~l~~P~~---~~~~P~Vli~gG-~~~~~~~~~~~-~~~~La~~Gy~vl~~D~pG~G~s~~- 238 (414)
T PRK05077 166 GELKELEFPIPGG-GPITGFLHLPKG---DGPFPTVLVCGG-LDSLQTDYYRL-FRDYLAPRGIAMLTIDMPSVGFSSK- 238 (414)
T ss_pred CceEEEEEEcCCC-cEEEEEEEECCC---CCCccEEEEeCC-cccchhhhHHH-HHHHHHhCCCEEEEECCCCCCCCCC-
Confidence 4578899998888 899999999973 367898876544 54432223332 3445666999999999999876422
Q ss_pred HHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc--CC-
Q 004766 529 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK--FT- 605 (732)
Q Consensus 529 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~--~~- 605 (732)
+. ..........+++++|.....+|++||+++|+|+||++++.++..+|++++++|+..|+++.+.... ..
T Consensus 239 ~~------~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~ 312 (414)
T PRK05077 239 WK------LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQ 312 (414)
T ss_pred CC------ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhh
Confidence 10 1111222335788999999899999999999999999999999988999999999988875221110 00
Q ss_pred CCC----ccccccCCC-CCHH-HHHHHHhcCccc--CCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHH
Q 004766 606 IGH----AWVSDFGCS-EEEE-EFYWLIKYSPLH--NVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQY 677 (732)
Q Consensus 606 ~~~----~~~~~~g~p-~~~~-~~~~~~~~sp~~--~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~ 677 (732)
... .+...+|.+ .+.+ ....+..++... .+.. .+..|+|++||.+|.+||+.++..+.+...
T Consensus 313 ~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~---------~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~- 382 (414)
T PRK05077 313 VPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGR---------RCPTPMLSGYWKNDPFSPEEDSRLIASSSA- 382 (414)
T ss_pred chHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhcc---------CCCCcEEEEecCCCCCCCHHHHHHHHHhCC-
Confidence 000 011123432 2222 222333333211 1111 378899999999999999999987765433
Q ss_pred hhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 678 VLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
...+.++++. |.+.. ..+....+.+||.++|
T Consensus 383 -------------~~~l~~i~~~-~~~e~----~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 383 -------------DGKLLEIPFK-PVYRN----FDKALQEISDWLEDRL 413 (414)
T ss_pred -------------CCeEEEccCC-CccCC----HHHHHHHHHHHHHHHh
Confidence 2467778876 33322 2356677889998876
No 26
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.80 E-value=2.5e-17 Score=180.21 Aligned_cols=262 Identities=16% Similarity=0.142 Sum_probs=173.5
Q ss_pred CCEEEEEEEcC--CCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC
Q 004766 90 GNKYFYFHNTG--LQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED 167 (732)
Q Consensus 90 g~~~~~~~~~~--~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~ 167 (732)
..++.|..... ....+.||..+..++..+.++.... .+..++|||||++|||+....+. .+||++|+++
T Consensus 162 ~~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~-------~~~~p~wSpDG~~la~~s~~~~~--~~l~~~~l~~ 232 (430)
T PRK00178 162 STRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQSRE-------PILSPRWSPDGKRIAYVSFEQKR--PRIFVQNLDT 232 (430)
T ss_pred eeeEEEEEeeCCCCCcceEEEEECCCCCCceEEecCCC-------ceeeeeECCCCCEEEEEEcCCCC--CEEEEEECCC
Confidence 34566665322 2345678887765455555554322 24588999999999999866543 6899999999
Q ss_pred CceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEE
Q 004766 168 QIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFS 247 (732)
Q Consensus 168 g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~ 247 (732)
|+....+........++|||||+.|+|+.... ...+||++++.++... .+.. .......
T Consensus 233 g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~----------------g~~~Iy~~d~~~~~~~--~lt~---~~~~~~~ 291 (430)
T PRK00178 233 GRREQITNFEGLNGAPAWSPDGSKLAFVLSKD----------------GNPEIYVMDLASRQLS--RVTN---HPAIDTE 291 (430)
T ss_pred CCEEEccCCCCCcCCeEECCCCCEEEEEEccC----------------CCceEEEEECCCCCeE--Eccc---CCCCcCC
Confidence 87543322111225799999999999986432 2357999999876432 2322 1223346
Q ss_pred eEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc-cceEEEEEecCCeEEEEeCCCCCC
Q 004766 248 GHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF-DAQYEVIANDDTVFTFLTNKDAPK 326 (732)
Q Consensus 248 ~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~s~~~~~~ 326 (732)
+.|||||++|+|.+.+.. ...||++++.++. .+.++... ......|+|||+.++|.+..++ .
T Consensus 292 ~~~spDg~~i~f~s~~~g--~~~iy~~d~~~g~--------------~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~-~ 354 (430)
T PRK00178 292 PFWGKDGRTLYFTSDRGG--KPQIYKVNVNGGR--------------AERVTFVGNYNARPRLSADGKTLVMVHRQDG-N 354 (430)
T ss_pred eEECCCCCEEEEEECCCC--CceEEEEECCCCC--------------EEEeecCCCCccceEECCCCCEEEEEEccCC-c
Confidence 899999999999875543 4679999987743 23333221 1122469999999999876543 6
Q ss_pred ceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeeccc
Q 004766 327 YKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARR 403 (732)
Q Consensus 327 ~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~ 403 (732)
++|+.+|++++. .+.|.... .-....|+++ +.+++....++...|++++++ |...+.++.+.+.+..+++++
T Consensus 355 ~~l~~~dl~tg~-~~~lt~~~---~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~~~p~ws~ 427 (430)
T PRK00178 355 FHVAAQDLQRGS-VRILTDTS---LDESPSVAPNGTMLIYATRQQGRGVLMLVSIN-GRVRLPLPTAQGEVREPSWSP 427 (430)
T ss_pred eEEEEEECCCCC-EEEccCCC---CCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECcCCCCCcCCCccCC
Confidence 789999998876 45554322 1234577765 567777777888899999996 655456765556665555543
No 27
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.80 E-value=3.1e-17 Score=178.92 Aligned_cols=262 Identities=16% Similarity=0.113 Sum_probs=173.1
Q ss_pred CCEEEEEEEcCC--CCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC
Q 004766 90 GNKYFYFHNTGL--QPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED 167 (732)
Q Consensus 90 g~~~~~~~~~~~--~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~ 167 (732)
+.+++|....+. .....||+.+..+...+.|+..+. .+..++|||||++|||+....+. .+|+++|+.+
T Consensus 167 ~~~ia~v~~~~~~~~~~~~l~i~D~~g~~~~~lt~~~~-------~v~~p~wSpDg~~la~~s~~~~~--~~l~~~dl~~ 237 (433)
T PRK04922 167 WTRIAYVTVSGAGGAMRYALQVADSDGYNPQTILRSAE-------PILSPAWSPDGKKLAYVSFERGR--SAIYVQDLAT 237 (433)
T ss_pred cceEEEEEEeCCCCCceEEEEEECCCCCCceEeecCCC-------ccccccCCCCCCEEEEEecCCCC--cEEEEEECCC
Confidence 456777755332 234678888764445566654322 24588999999999999765553 6899999999
Q ss_pred CceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEE
Q 004766 168 QIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFS 247 (732)
Q Consensus 168 g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~ 247 (732)
|+....+........++|||||+.|+|+.... ...+||++++.++... .+.. .......
T Consensus 238 g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~----------------g~~~Iy~~d~~~g~~~--~lt~---~~~~~~~ 296 (433)
T PRK04922 238 GQRELVASFRGINGAPSFSPDGRRLALTLSRD----------------GNPEIYVMDLGSRQLT--RLTN---HFGIDTE 296 (433)
T ss_pred CCEEEeccCCCCccCceECCCCCEEEEEEeCC----------------CCceEEEEECCCCCeE--ECcc---CCCCccc
Confidence 88543321111235789999999999986432 2357999999876432 2222 1223347
Q ss_pred eEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeec-ccceEEEEEecCCeEEEEeCCCCCC
Q 004766 248 GHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG-FDAQYEVIANDDTVFTFLTNKDAPK 326 (732)
Q Consensus 248 ~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~s~dg~~l~~~s~~~~~~ 326 (732)
++|||||++|++.+.+.. ..+||++++.++. .+.++.. .......|+|||+.|++.+.. ...
T Consensus 297 ~~~spDG~~l~f~sd~~g--~~~iy~~dl~~g~--------------~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~-~~~ 359 (433)
T PRK04922 297 PTWAPDGKSIYFTSDRGG--RPQIYRVAASGGS--------------AERLTFQGNYNARASVSPDGKKIAMVHGS-GGQ 359 (433)
T ss_pred eEECCCCCEEEEEECCCC--CceEEEEECCCCC--------------eEEeecCCCCccCEEECCCCCEEEEEECC-CCc
Confidence 899999999999876543 4679999987643 2334322 111234699999999998764 345
Q ss_pred ceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeeccc
Q 004766 327 YKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARR 403 (732)
Q Consensus 327 ~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~ 403 (732)
++|+.+|+.++. .+.|.... ....+.|+++ ..+++.....+...|++++++ |...++++.+.+.+..++++|
T Consensus 360 ~~I~v~d~~~g~-~~~Lt~~~---~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 360 YRIAVMDLSTGS-VRTLTPGS---LDESPSFAPNGSMVLYATREGGRGVLAAVSTD-GRVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred eeEEEEECCCCC-eEECCCCC---CCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEEcccCCCCCCCCccCC
Confidence 689999998876 45554332 2345678875 457777777778899999996 555467765555555555543
No 28
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.79 E-value=7.3e-19 Score=173.50 Aligned_cols=205 Identities=17% Similarity=0.177 Sum_probs=141.4
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCC--Cch---h--HHhcccccC
Q 004766 465 IPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGE--YGE---E--WHKGGALAK 537 (732)
Q Consensus 465 i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~--~g~---~--~~~~~~~~~ 537 (732)
+.+++..|++. ++.|.||++|+.+|.. .+...+...|+++||.|++||+-++.. ... . .........
T Consensus 1 ~~ay~~~P~~~---~~~~~Vvv~~d~~G~~---~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~ 74 (218)
T PF01738_consen 1 IDAYVARPEGG---GPRPAVVVIHDIFGLN---PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPR 74 (218)
T ss_dssp EEEEEEEETTS---SSEEEEEEE-BTTBS----HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHS
T ss_pred CeEEEEeCCCC---CCCCEEEEEcCCCCCc---hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhh
Confidence 56888999873 6899999999999875 333345666777999999999866554 111 1 111000111
Q ss_pred CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCC
Q 004766 538 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCS 617 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p 617 (732)
......|+.+++++|.+++.++++||+++|+|+||.++..++.+. +.++|+|+..|.. . +
T Consensus 75 ~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~--------~-----------~ 134 (218)
T PF01738_consen 75 PEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGS--------P-----------P 134 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SS--------S-----------G
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCC--------C-----------C
Confidence 234578899999999999878899999999999999999998875 6899999988800 0 0
Q ss_pred CCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEe
Q 004766 618 EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIE 697 (732)
Q Consensus 618 ~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 697 (732)
.. +..... .+.+|+|+.+|.+|+.++..+..++.++|+++ +.++++++|
T Consensus 135 ~~-----------~~~~~~----------~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~----------~~~~~~~~y 183 (218)
T PF01738_consen 135 PP-----------PLEDAP----------KIKAPVLILFGENDPFFPPEEVEALEEALKAA----------GVDVEVHVY 183 (218)
T ss_dssp GG-----------HHHHGG----------G--S-EEEEEETT-TTS-HHHHHHHHHHHHCT----------TTTEEEEEE
T ss_pred Cc-----------chhhhc----------ccCCCEeecCccCCCCCChHHHHHHHHHHHhc----------CCcEEEEEC
Confidence 00 111111 26789999999999999999999999999887 899999999
Q ss_pred CCCCCCCCCch------HHHHHHHHHHHHHHHHHh
Q 004766 698 RKAGHGVGLPT------QKMIDEAADRYGFMAKML 726 (732)
Q Consensus 698 ~~~gH~~~~~~------~~~~~~~~~~~~fl~~~l 726 (732)
++++|+|..+. ....+.++++.+||.++|
T Consensus 184 ~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 184 PGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp TT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred CCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 99999996432 224567788899998876
No 29
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.79 E-value=2e-18 Score=169.24 Aligned_cols=194 Identities=13% Similarity=0.112 Sum_probs=132.3
Q ss_pred EEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchh--HHhcccccCCccHHHH
Q 004766 467 MFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE--WHKGGALAKKQNCFDD 544 (732)
Q Consensus 467 ~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~--~~~~~~~~~~~~~~~D 544 (732)
++++.|++. +++.|+||++||+.+..........+..++++.||+|++||+||++..+.. |..............|
T Consensus 1 ~~ly~P~~~--~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T TIGR01840 1 MYVYVPAGL--TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVES 78 (212)
T ss_pred CEEEcCCCC--CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHH
Confidence 467888874 468999999999876543322112245667778999999999998755443 3332222223345788
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHH
Q 004766 545 FISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFY 624 (732)
Q Consensus 545 ~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~ 624 (732)
+...++++.++..+|++||+|.|+|+||+++..++.++|++|+++++.++..-........ . ......+.....+.
T Consensus 79 ~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~---~-~~~~~~~~~~~~~~ 154 (212)
T TIGR01840 79 LHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSIS---A-TPQMCTAATAASVC 154 (212)
T ss_pred HHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchh---h-HhhcCCCCCHHHHH
Confidence 8899999998877899999999999999999999999999999998877653211100000 0 01111222222222
Q ss_pred HH-HhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHh
Q 004766 625 WL-IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYV 678 (732)
Q Consensus 625 ~~-~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~ 678 (732)
.+ .... .... ...||++|+||.+|..||+..+.+++++|++.
T Consensus 155 ~~~~~~~--~~~~----------~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 155 RLVRGMQ--SEYN----------GPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHhccC--Cccc----------CCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 22 2211 1111 25788999999999999999999999999986
No 30
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=1.2e-17 Score=164.49 Aligned_cols=216 Identities=18% Similarity=0.186 Sum_probs=164.4
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCC----c-
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEY----G- 526 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~----g- 526 (732)
+.+.++++| .++++++.+|+.. ++.|.||.+|+.+|... +.......|+++||+|++||+-+..+. +
T Consensus 3 ~~v~~~~~~--~~~~~~~a~P~~~---~~~P~VIv~hei~Gl~~---~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~ 74 (236)
T COG0412 3 TDVTIPAPD--GELPAYLARPAGA---GGFPGVIVLHEIFGLNP---HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIED 74 (236)
T ss_pred cceEeeCCC--ceEeEEEecCCcC---CCCCEEEEEecccCCch---HHHHHHHHHHhCCcEEEechhhccCCCCCcccc
Confidence 346677755 5999999999874 44599999999999742 344456677779999999998542221 1
Q ss_pred -hhHHhcc--cccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc
Q 004766 527 -EEWHKGG--ALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK 603 (732)
Q Consensus 527 -~~~~~~~--~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~ 603 (732)
......+ ..........|+.++++||..++.++++||+++|+|+||.+++.++.+.| .++|+|+..|..-.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~----- 148 (236)
T COG0412 75 EPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA----- 148 (236)
T ss_pred cHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC-----
Confidence 1122211 11112467899999999999999899999999999999999999999876 79999987773210
Q ss_pred CCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCC
Q 004766 604 FTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSL 683 (732)
Q Consensus 604 ~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~ 683 (732)
.. + .... +++.|+|+.+|..|..+|.....++.+++.++
T Consensus 149 -----~~------~---------------~~~~----------~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~----- 187 (236)
T COG0412 149 -----DD------T---------------ADAP----------KIKVPVLLHLAGEDPYIPAADVDALAAALEDA----- 187 (236)
T ss_pred -----Cc------c---------------cccc----------cccCcEEEEecccCCCCChhHHHHHHHHHHhc-----
Confidence 00 0 0022 27889999999999999999999999999987
Q ss_pred CCCCCCCCEEEEEeCCCCCCCCCch---------HHHHHHHHHHHHHHHHHhC
Q 004766 684 ENSPQTNPIIGRIERKAGHGVGLPT---------QKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gH~~~~~~---------~~~~~~~~~~~~fl~~~l~ 727 (732)
+..+.+.+|+++.|+|..+. ......++++++||.++++
T Consensus 188 -----~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 188 -----GVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred -----CCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 77899999999999998542 2245677889999999886
No 31
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.78 E-value=6.7e-17 Score=176.52 Aligned_cols=245 Identities=12% Similarity=0.099 Sum_probs=170.2
Q ss_pred CcEEEEEEeccCCc--eEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEE
Q 004766 143 AKYLAYALSYSGSD--WATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEF 220 (732)
Q Consensus 143 G~~la~~~~~~G~e--~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v 220 (732)
..+|||+...+|.+ ..+||++|.+++.....+........++|||||+.|+|++... ...+|
T Consensus 165 ~~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~----------------g~~~i 228 (435)
T PRK05137 165 DTRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYAN----------------GRPRV 228 (435)
T ss_pred CCeEEEEEeeCCCCCcceEEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecC----------------CCCEE
Confidence 56899998876643 5799999998776443333222347899999999999997533 23579
Q ss_pred EEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee
Q 004766 221 YYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID 300 (732)
Q Consensus 221 ~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (732)
|++++.++... .+... ++....+.|||||+.|++..+... ..+||++|++++. .+.++.
T Consensus 229 ~~~dl~~g~~~--~l~~~---~g~~~~~~~SPDG~~la~~~~~~g--~~~Iy~~d~~~~~--------------~~~Lt~ 287 (435)
T PRK05137 229 YLLDLETGQRE--LVGNF---PGMTFAPRFSPDGRKVVMSLSQGG--NTDIYTMDLRSGT--------------TTRLTD 287 (435)
T ss_pred EEEECCCCcEE--EeecC---CCcccCcEECCCCCEEEEEEecCC--CceEEEEECCCCc--------------eEEccC
Confidence 99999876532 23222 223457899999999998876544 5789999998753 344544
Q ss_pred cccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEE
Q 004766 301 GFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIR 378 (732)
Q Consensus 301 ~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~ 378 (732)
..... ...|+|||+.|+|.+++.+ ..+||++|++++. .+.++... .....+.|+++ +.|++.....+..+|+++
T Consensus 288 ~~~~~~~~~~spDG~~i~f~s~~~g-~~~Iy~~d~~g~~-~~~lt~~~--~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~ 363 (435)
T PRK05137 288 SPAIDTSPSYSPDGSQIVFESDRSG-SPQLYVMNADGSN-PRRISFGG--GRYSTPVWSPRGDLIAFTKQGGGQFSIGVM 363 (435)
T ss_pred CCCccCceeEcCCCCEEEEEECCCC-CCeEEEEECCCCC-eEEeecCC--CcccCeEECCCCCEEEEEEcCCCceEEEEE
Confidence 32222 2469999999999987654 4689999998775 45665432 23455778875 456666665666789999
Q ss_pred eCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCC--ceEEEEECCCCC
Q 004766 379 DLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIP--GIVYQCNLKTET 430 (732)
Q Consensus 379 d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p--~~~y~~d~~~~~ 430 (732)
+++++.. +.++.. ..+..++++|||+.++|+....... ..+|.+|+.+++
T Consensus 364 d~~~~~~-~~lt~~-~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~ 415 (435)
T PRK05137 364 KPDGSGE-RILTSG-FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRN 415 (435)
T ss_pred ECCCCce-EeccCC-CCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCc
Confidence 9874443 555532 3455678899999988877654443 589999997764
No 32
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.78 E-value=1.3e-16 Score=172.38 Aligned_cols=260 Identities=12% Similarity=0.070 Sum_probs=172.6
Q ss_pred EeEEECCCCcEEEEEEeccCCc----eEEEEEEECCCCceecccccceeeeeEEEEeCCcE--EEEEEecCCCCCCCCCC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSD----WATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKG--FFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e----~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~--l~y~~~~~~~~~~~~~~ 208 (732)
+...++ +++|||+....+.+ .+.||++|.+++...+.+........++|||||+. |+|++...
T Consensus 140 g~~g~~--~~~iayv~~~~~~~~~~~~~~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~--------- 208 (428)
T PRK01029 140 GVPGIS--SGKIIFSLSTTNSDTELKQGELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKL--------- 208 (428)
T ss_pred CCCccc--cCEEEEEEeeCCcccccccceEEEEcCCCCCceEcccCCCCcccceEccCCCceEEEEEEccC---------
Confidence 344455 89999998765422 46999999998876554433323368999999987 55676532
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEE--eCCCCCCCcccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYC--DLSALPEGLEGF 286 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~--d~~~~~~~~~~~ 286 (732)
...+||+.++.++... .+...+ +....+.|||||++|++.+.... ..++|+. +++++..
T Consensus 209 -------g~~~I~~~~l~~g~~~--~lt~~~---g~~~~p~wSPDG~~Laf~s~~~g--~~di~~~~~~~~~g~~----- 269 (428)
T PRK01029 209 -------GVPKIFLGSLENPAGK--KILALQ---GNQLMPTFSPRKKLLAFISDRYG--NPDLFIQSFSLETGAI----- 269 (428)
T ss_pred -------CCceEEEEECCCCCce--EeecCC---CCccceEECCCCCEEEEEECCCC--CcceeEEEeecccCCC-----
Confidence 2357999999887544 333222 22346899999999999875433 3456664 5544211
Q ss_pred cccCCCCCcEEeeecc-cc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCC-CCceEeccCCCCCceeEEEEecC-CE
Q 004766 287 KKRDGLLPFVKLIDGF-DA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP-NDWFEVIPEAERDVLESATAVNL-NQ 362 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~-~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~-~~~~~l~~~~~~~~l~~~~~~~~-~~ 362 (732)
...+.++.+. .. ....|+|||+.|+|.+++++ ..+||.+++.+. ...+.+.... .....+.|++| +.
T Consensus 270 ------g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g-~~~ly~~~~~~~g~~~~~lt~~~--~~~~~p~wSPDG~~ 340 (428)
T PRK01029 270 ------GKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDG-RPRIYIMQIDPEGQSPRLLTKKY--RNSSCPAWSPDGKK 340 (428)
T ss_pred ------CcceEeecCCCCCcCCeEECCCCCEEEEEECCCC-CceEEEEECcccccceEEeccCC--CCccceeECCCCCE
Confidence 1134455432 11 23469999999999987654 457999988532 2234444332 33456788876 55
Q ss_pred EEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEE
Q 004766 363 MIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFR 437 (732)
Q Consensus 363 l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~ 437 (732)
|++....++..+|+++|+++|+. +.++...+.+..+.+++||+.++|+... .....+|.+|+.+++ .+.+.
T Consensus 341 Laf~~~~~g~~~I~v~dl~~g~~-~~Lt~~~~~~~~p~wSpDG~~L~f~~~~-~g~~~L~~vdl~~g~--~~~Lt 411 (428)
T PRK01029 341 IAFCSVIKGVRQICVYDLATGRD-YQLTTSPENKESPSWAIDSLHLVYSAGN-SNESELYLISLITKK--TRKIV 411 (428)
T ss_pred EEEEEcCCCCcEEEEEECCCCCe-EEccCCCCCccceEECCCCCEEEEEECC-CCCceEEEEECCCCC--EEEee
Confidence 77777777778999999987775 6676444455667889999988877654 345789999998874 44443
No 33
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.75 E-value=8.8e-17 Score=170.70 Aligned_cols=248 Identities=13% Similarity=0.057 Sum_probs=154.3
Q ss_pred ceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchh
Q 004766 449 FHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE 528 (732)
Q Consensus 449 ~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~ 528 (732)
+..++..+.+.|| .+|.+....|++ ..+.|+||++||..+.. . .|...+...|+++||.|+++|+||.|.....
T Consensus 59 ~~~~~~~~~~~~g-~~l~~~~~~p~~---~~~~~~iv~lHG~~~~~-~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~ 132 (349)
T PLN02385 59 IKTEESYEVNSRG-VEIFSKSWLPEN---SRPKAAVCFCHGYGDTC-T-FFFEGIARKIASSGYGVFAMDYPGFGLSEGL 132 (349)
T ss_pred cceeeeeEEcCCC-CEEEEEEEecCC---CCCCeEEEEECCCCCcc-c-hHHHHHHHHHHhCCCEEEEecCCCCCCCCCC
Confidence 3334445556799 999998888864 24678999999975542 1 2222344556658999999999998864321
Q ss_pred HHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc-----
Q 004766 529 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK----- 603 (732)
Q Consensus 529 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~----- 603 (732)
.+....-..-.+|+.+.++++..+...++.++.++|+||||++++.++.++|++++++|+..|.........
T Consensus 133 ---~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~ 209 (349)
T PLN02385 133 ---HGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLV 209 (349)
T ss_pred ---CCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHH
Confidence 000001122355666666666544333456899999999999999999999999999999888653211000
Q ss_pred ----------CCC----CCccccc--cCCCCC-----------------HHHHHHHHhcCcc-cCCCCCCCCCCCCCCCC
Q 004766 604 ----------FTI----GHAWVSD--FGCSEE-----------------EEEFYWLIKYSPL-HNVRRPWEQNPDKPFQY 649 (732)
Q Consensus 604 ----------~~~----~~~~~~~--~g~p~~-----------------~~~~~~~~~~sp~-~~~~~~~~~~~~~~~~~ 649 (732)
... ....... +.++.. ....+.+.....+ ..+. .+.
T Consensus 210 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~----------~i~ 279 (349)
T PLN02385 210 LQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLE----------EVS 279 (349)
T ss_pred HHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcc----------cCC
Confidence 000 0000000 111000 0000111110000 1122 378
Q ss_pred CeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCC--chHHHHHHHHHHHHHHHHHhC
Q 004766 650 PSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGL--PTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 650 ~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~l~ 727 (732)
.|+||+||.+|..||+..+.++++++.. ....+++++++||.... +.......+..+.+||.+++.
T Consensus 280 ~P~Lii~G~~D~vv~~~~~~~l~~~~~~------------~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 280 LPLLILHGEADKVTDPSVSKFLYEKASS------------SDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CCEEEEEeCCCCccChHHHHHHHHHcCC------------CCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998887652 23578889999999763 322234577889999998864
No 34
>PHA02857 monoglyceride lipase; Provisional
Probab=99.75 E-value=1.1e-16 Score=164.56 Aligned_cols=232 Identities=12% Similarity=0.053 Sum_probs=151.9
Q ss_pred EEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccc
Q 004766 456 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 535 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~ 535 (732)
+.+.|| .++++.++.|.+ .+.|+|+++||..+.+ ..|.. +...|+++||.|+++|.||.|..... ....
T Consensus 5 ~~~~~g-~~l~~~~~~~~~----~~~~~v~llHG~~~~~--~~~~~-~~~~l~~~g~~via~D~~G~G~S~~~---~~~~ 73 (276)
T PHA02857 5 MFNLDN-DYIYCKYWKPIT----YPKALVFISHGAGEHS--GRYEE-LAENISSLGILVFSHDHIGHGRSNGE---KMMI 73 (276)
T ss_pred eecCCC-CEEEEEeccCCC----CCCEEEEEeCCCcccc--chHHH-HHHHHHhCCCEEEEccCCCCCCCCCc---cCCc
Confidence 345699 999999998852 4568999999976543 34443 45556658999999999999864321 0001
Q ss_pred cCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccc--------------
Q 004766 536 AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY-------------- 601 (732)
Q Consensus 536 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~-------------- 601 (732)
..-...++|+...++++.+. ....++.++|+|+||+++..++.++|++++++|+.+|..+....
T Consensus 74 ~~~~~~~~d~~~~l~~~~~~--~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~ 151 (276)
T PHA02857 74 DDFGVYVRDVVQHVVTIKST--YPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIF 151 (276)
T ss_pred CCHHHHHHHHHHHHHHHHhh--CCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHh
Confidence 11122367777888777654 22367999999999999999999999999999999997653110
Q ss_pred ccCCCCCccccccCCCCCHHHHHHHHhcCcc----------------------cCCCCCCCCCCCCCCCCCeEEEEeeCC
Q 004766 602 HKFTIGHAWVSDFGCSEEEEEFYWLIKYSPL----------------------HNVRRPWEQNPDKPFQYPSTLLLTADH 659 (732)
Q Consensus 602 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~----------------------~~~~~~~~~~~~~~~~~~p~Li~~g~~ 659 (732)
........+...+-.....+.. ...++|+ ..+. .+..|+|+++|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~i~~Pvliv~G~~ 219 (276)
T PHA02857 152 YPNKIVGKLCPESVSRDMDEVY--KYQYDPLVNHEKIKAGFASQVLKATNKVRKIIP----------KIKTPILILQGTN 219 (276)
T ss_pred CCCCccCCCCHhhccCCHHHHH--HHhcCCCccCCCccHHHHHHHHHHHHHHHHhcc----------cCCCCEEEEecCC
Confidence 0000000000000000000100 0111221 1122 3789999999999
Q ss_pred CCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchH-HHHHHHHHHHHHHHHH
Q 004766 660 DDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQ-KMIDEAADRYGFMAKM 725 (732)
Q Consensus 660 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~~fl~~~ 725 (732)
|..||+..+.++.+++. . .+.+.+++++||....... .+.+.++++.+||.++
T Consensus 220 D~i~~~~~~~~l~~~~~------------~-~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 220 NEISDVSGAYYFMQHAN------------C-NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCcCChHHHHHHHHHcc------------C-CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999988877653 1 3688999999998875432 2467888999999886
No 35
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.75 E-value=6.4e-16 Score=165.77 Aligned_cols=239 Identities=13% Similarity=0.132 Sum_probs=165.6
Q ss_pred cEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcE-EEEEEecCCCCCCCCCCCCcccCCcccEEEE
Q 004766 144 KYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKG-FFYSRYPAPKEGKDMDAGTETDSNLYHEFYY 222 (732)
Q Consensus 144 ~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~-l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 222 (732)
.++||.+...|...++|++.|.++......+..+ ....+.|||||++ ++|++... +..+||+
T Consensus 155 ~r~~~v~~~~~~~~~~l~~~d~dg~~~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~----------------~~~~Iyv 217 (419)
T PRK04043 155 KRKVVFSKYTGPKKSNIVLADYTLTYQKVIVKGG-LNIFPKWANKEQTAFYYTSYGE----------------RKPTLYK 217 (419)
T ss_pred eeEEEEEEccCCCcceEEEECCCCCceeEEccCC-CeEeEEECCCCCcEEEEEEccC----------------CCCEEEE
Confidence 5778887655544589999999877644333333 2368999999996 77776432 2348999
Q ss_pred EECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc
Q 004766 223 HFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF 302 (732)
Q Consensus 223 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~ 302 (732)
+++.+++.+ .+... ++....+.|||||+.|++...... ..+||+++++++. .++++...
T Consensus 218 ~dl~tg~~~--~lt~~---~g~~~~~~~SPDG~~la~~~~~~g--~~~Iy~~dl~~g~--------------~~~LT~~~ 276 (419)
T PRK04043 218 YNLYTGKKE--KIASS---QGMLVVSDVSKDGSKLLLTMAPKG--QPDIYLYDTNTKT--------------LTQITNYP 276 (419)
T ss_pred EECCCCcEE--EEecC---CCcEEeeEECCCCCEEEEEEccCC--CcEEEEEECCCCc--------------EEEcccCC
Confidence 999887543 44432 223446889999999999886544 6789999998753 44555433
Q ss_pred c-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecC------CeeE
Q 004766 303 D-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSD------VKYV 374 (732)
Q Consensus 303 ~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~------g~~~ 374 (732)
. .....|+|||++|+|.+++.+ ..+||++|+++++ .+.++... .. ...|+++ +.+++..... +..+
T Consensus 277 ~~d~~p~~SPDG~~I~F~Sdr~g-~~~Iy~~dl~~g~-~~rlt~~g-~~---~~~~SPDG~~Ia~~~~~~~~~~~~~~~~ 350 (419)
T PRK04043 277 GIDVNGNFVEDDKRIVFVSDRLG-YPNIFMKKLNSGS-VEQVVFHG-KN---NSSVSTYKNYIVYSSRETNNEFGKNTFN 350 (419)
T ss_pred CccCccEECCCCCEEEEEECCCC-CceEEEEECCCCC-eEeCccCC-Cc---CceECCCCCEEEEEEcCCCcccCCCCcE
Confidence 2 123469999999999998754 5689999999887 45555433 12 2467765 5576666554 3368
Q ss_pred EEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 375 LQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 375 l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
|+++|+++|+. +.|+.. +....++++|||+.++|+... ..-..++.+++...
T Consensus 351 I~v~d~~~g~~-~~LT~~-~~~~~p~~SPDG~~I~f~~~~-~~~~~L~~~~l~g~ 402 (419)
T PRK04043 351 LYLISTNSDYI-RRLTAN-GVNQFPRFSSDGGSIMFIKYL-GNQSALGIIRLNYN 402 (419)
T ss_pred EEEEECCCCCe-EECCCC-CCcCCeEECCCCCEEEEEEcc-CCcEEEEEEecCCC
Confidence 99999987765 777753 233357789999988887554 44457899998765
No 36
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.75 E-value=1.2e-17 Score=153.06 Aligned_cols=214 Identities=15% Similarity=0.185 Sum_probs=154.8
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
+.+-.||++||..|++.+..+ ....|.++||.|.+|++||+|-..+.+-.-+...| ++|+.++.++|.+.||
T Consensus 13 ~G~~AVLllHGFTGt~~Dvr~---Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~~gy- 84 (243)
T COG1647 13 GGNRAVLLLHGFTGTPRDVRM---LGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKEAGY- 84 (243)
T ss_pred cCCEEEEEEeccCCCcHHHHH---HHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHHcCC-
Confidence 444799999998887654443 45678889999999999999998888877655544 6899999999999998
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc-CCCCCccc---cccCCCCCHHHHHHHHhcC--cc
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK-FTIGHAWV---SDFGCSEEEEEFYWLIKYS--PL 632 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~-~~~~~~~~---~~~g~p~~~~~~~~~~~~s--p~ 632 (732)
+.|++.|.||||.+++.++.++| .+++|..++.+.+..... ...--.|. +.|-+++.+..-+.|+++. |.
T Consensus 85 --~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~ 160 (243)
T COG1647 85 --DEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPM 160 (243)
T ss_pred --CeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchH
Confidence 47999999999999999999998 566665555444321110 00000111 2233333333334455555 32
Q ss_pred ----------cCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCC
Q 004766 633 ----------HNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGH 702 (732)
Q Consensus 633 ----------~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH 702 (732)
..+.+. -..|+.|+||+.|.+|..||...+..++..+. ..+.+|..|.++||
T Consensus 161 ~~~~~~~~~i~~~~~~------~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~------------s~~KeL~~~e~SgH 222 (243)
T COG1647 161 TTTAQLKKLIKDARRS------LDKIYSPTLVVQGRQDEMVPAESANFIYDHVE------------SDDKELKWLEGSGH 222 (243)
T ss_pred HHHHHHHHHHHHHHhh------hhhcccchhheecccCCCCCHHHHHHHHHhcc------------CCcceeEEEccCCc
Confidence 111111 11389999999999999999999999988876 45679999999999
Q ss_pred CCCCchHHHHHHHHHHHHHHH
Q 004766 703 GVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~fl~ 723 (732)
-+..+..+ -...+.++.||.
T Consensus 223 VIt~D~Er-d~v~e~V~~FL~ 242 (243)
T COG1647 223 VITLDKER-DQVEEDVITFLE 242 (243)
T ss_pred eeecchhH-HHHHHHHHHHhh
Confidence 99887764 678889999985
No 37
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.75 E-value=4.9e-16 Score=169.14 Aligned_cols=258 Identities=14% Similarity=0.063 Sum_probs=164.8
Q ss_pred EEeCCEEEEEEEcC-CCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEEC
Q 004766 87 FKRGNKYFYFHNTG-LQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRI 165 (732)
Q Consensus 87 ~~~g~~~~~~~~~~-~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl 165 (732)
-.-+.++.|..... +.....||+.+..+...++|+..+. .+..++|||||++|||+...++ ..+|+++|+
T Consensus 165 g~f~~ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~~~~-------~v~~p~wSPDG~~la~~s~~~~--~~~i~i~dl 235 (429)
T PRK01742 165 GAFRTRIAYVVQKNGGSQPYEVRVADYDGFNQFIVNRSSQ-------PLMSPAWSPDGSKLAYVSFENK--KSQLVVHDL 235 (429)
T ss_pred CccCCEEEEEEEEcCCCceEEEEEECCCCCCceEeccCCC-------ccccceEcCCCCEEEEEEecCC--CcEEEEEeC
Confidence 33456777776533 2234678888764444455554332 2458999999999999976443 368999999
Q ss_pred CCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCee
Q 004766 166 EDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKY 244 (732)
Q Consensus 166 ~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~ 244 (732)
.+|+..... ..+ ....++|||||+.|+|+.... ...+||.+++.++... .+.. +...
T Consensus 236 ~tg~~~~l~~~~g-~~~~~~wSPDG~~La~~~~~~----------------g~~~Iy~~d~~~~~~~--~lt~---~~~~ 293 (429)
T PRK01742 236 RSGARKVVASFRG-HNGAPAFSPDGSRLAFASSKD----------------GVLNIYVMGANGGTPS--QLTS---GAGN 293 (429)
T ss_pred CCCceEEEecCCC-ccCceeECCCCCEEEEEEecC----------------CcEEEEEEECCCCCeE--eecc---CCCC
Confidence 998743221 222 125799999999999986322 2246999998765432 2222 2223
Q ss_pred EEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCC
Q 004766 245 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDA 324 (732)
Q Consensus 245 ~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~ 324 (732)
...+.|||||++|++.+.+.. ..+||.++..++. .+.+ .... ....|+|||+.|++.+.
T Consensus 294 ~~~~~wSpDG~~i~f~s~~~g--~~~I~~~~~~~~~--------------~~~l-~~~~-~~~~~SpDG~~ia~~~~--- 352 (429)
T PRK01742 294 NTEPSWSPDGQSILFTSDRSG--SPQVYRMSASGGG--------------ASLV-GGRG-YSAQISADGKTLVMING--- 352 (429)
T ss_pred cCCEEECCCCCEEEEEECCCC--CceEEEEECCCCC--------------eEEe-cCCC-CCccCCCCCCEEEEEcC---
Confidence 457999999999999875443 4689999887632 1222 2111 12358999999988654
Q ss_pred CCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCE-EEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeeccc
Q 004766 325 PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARR 403 (732)
Q Consensus 325 ~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~-l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~ 403 (732)
..++.+|+.++. ++.+.... ....+.|++++. +++...+++...+++++.+ |+..++|+.+.+.+..++++|
T Consensus 353 --~~i~~~Dl~~g~-~~~lt~~~---~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~-G~~~~~l~~~~g~~~~p~wsp 425 (429)
T PRK01742 353 --DNVVKQDLTSGS-TEVLSSTF---LDESPSISPNGIMIIYSSTQGLGKVLQLVSAD-GRFKARLPGSDGQVKFPAWSP 425 (429)
T ss_pred --CCEEEEECCCCC-eEEecCCC---CCCCceECCCCCEEEEEEcCCCceEEEEEECC-CCceEEccCCCCCCCCcccCC
Confidence 358889998876 44444332 234567887654 5555555555567777775 776677865566665666655
No 38
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.74 E-value=8.9e-16 Score=166.65 Aligned_cols=242 Identities=13% Similarity=0.102 Sum_probs=164.3
Q ss_pred cEEEEEEeccC-CceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEE
Q 004766 144 KYLAYALSYSG-SDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYY 222 (732)
Q Consensus 144 ~~la~~~~~~G-~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 222 (732)
++|||+....+ ...++||++|.+++.....+........++|||||+.|+|++... ...+||+
T Consensus 164 ~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~----------------g~~~i~i 227 (429)
T PRK03629 164 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES----------------GRSALVI 227 (429)
T ss_pred CeEEEEEeeCCCCcceeEEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecC----------------CCcEEEE
Confidence 78999987543 335799999998876443333322347899999999999987432 2347999
Q ss_pred EECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc
Q 004766 223 HFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF 302 (732)
Q Consensus 223 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~ 302 (732)
+++.++..+ .+...+. ....+.|||||++|++...... ..+||++|++++. .+.++...
T Consensus 228 ~dl~~G~~~--~l~~~~~---~~~~~~~SPDG~~La~~~~~~g--~~~I~~~d~~tg~--------------~~~lt~~~ 286 (429)
T PRK03629 228 QTLANGAVR--QVASFPR---HNGAPAFSPDGSKLAFALSKTG--SLNLYVMDLASGQ--------------IRQVTDGR 286 (429)
T ss_pred EECCCCCeE--EccCCCC---CcCCeEECCCCCEEEEEEcCCC--CcEEEEEECCCCC--------------EEEccCCC
Confidence 999776433 3332222 2346899999999999865433 4579999998753 34444432
Q ss_pred c-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeC
Q 004766 303 D-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDL 380 (732)
Q Consensus 303 ~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~ 380 (732)
. .....|+|||+.|+|.+++.+ ..+||.+|++++. .+.+.... .....+.|+++ +.+++....++...|+++|+
T Consensus 287 ~~~~~~~wSPDG~~I~f~s~~~g-~~~Iy~~d~~~g~-~~~lt~~~--~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl 362 (429)
T PRK03629 287 SNNTEPTWFPDSQNLAYTSDQAG-RPQVYKVNINGGA-PQRITWEG--SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 362 (429)
T ss_pred CCcCceEECCCCCEEEEEeCCCC-CceEEEEECCCCC-eEEeecCC--CCccCEEECCCCCEEEEEEccCCCceEEEEEC
Confidence 2 223469999999999988754 4689999998876 45554332 23345777875 46777777777778999999
Q ss_pred CCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 381 KNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 381 ~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
++|+. +.|+.. .....++++|||..++++... .....++.+++.++
T Consensus 363 ~~g~~-~~Lt~~-~~~~~p~~SpDG~~i~~~s~~-~~~~~l~~~~~~G~ 408 (429)
T PRK03629 363 ATGGV-QVLTDT-FLDETPSIAPNGTMVIYSSSQ-GMGSVLNLVSTDGR 408 (429)
T ss_pred CCCCe-EEeCCC-CCCCCceECCCCCEEEEEEcC-CCceEEEEEECCCC
Confidence 87765 666632 223356788999988776553 23456788887554
No 39
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.74 E-value=2.1e-16 Score=180.43 Aligned_cols=259 Identities=17% Similarity=0.152 Sum_probs=173.6
Q ss_pred CCCCCCCceEEEEEEEcc-----CC-CeeEEEEEEEcCCCCCCCCccEEEEEcCCCCcc---------------C---C-
Q 004766 442 PGFDRSEFHVHQVFVPSK-----DG-STKIPMFIVSKKNIKLDGSHPCLLYGYGGFNIS---------------V---T- 496 (732)
Q Consensus 442 ~~~~~~~~~~~~~~~~s~-----dG-~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~---------------~---~- 496 (732)
|-|+...+..|.|++.+. || .-.|.+.|++|+....+-+.|+|+-.--.+... . .
T Consensus 161 ~~~~~~~~ire~v~Vet~~Dtd~dg~~D~v~~~i~rP~~~~~g~k~p~i~~aspY~~g~~~~~~~~~~~~~~~~l~~~~~ 240 (767)
T PRK05371 161 PVFDTSQLIREVVYVETPVDTDQDGKLDLVKVTIVRPKETASGLKVPVIMTASPYYQGTNDVANDKKLHNVDVELYAKPP 240 (767)
T ss_pred cccCcccceEEEEEEeCCCCCCCCCCcceEEEEEECCCccCCCCccceEEecCccccCCCCcccccccccCCccccccCC
Confidence 346777777788888764 44 225788888888754334778877532211110 0 0
Q ss_pred --------------------CCc----ChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHH
Q 004766 497 --------------------PSF----SVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYL 552 (732)
Q Consensus 497 --------------------~~~----~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l 552 (732)
..| ......++..+||+|++.|.||.++.+..|.. ......+|..++|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-----~~~~E~~D~~~vIeWl 315 (767)
T PRK05371 241 RAQFTPLKTQPRKLPVGPAEESFTHINSYSLNDYFLPRGFAVVYVSGIGTRGSDGCPTT-----GDYQEIESMKAVIDWL 315 (767)
T ss_pred ccccccccccccccCCCccchhhccCcchhHHHHHHhCCeEEEEEcCCCCCCCCCcCcc-----CCHHHHHHHHHHHHHH
Confidence 000 11234566669999999999999876555432 2356779999999999
Q ss_pred HHc--CCCC------------CCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCC-----cc---
Q 004766 553 ISA--GYTQ------------SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGH-----AW--- 610 (732)
Q Consensus 553 ~~~--~~~d------------~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~-----~~--- 610 (732)
..+ .++| .+|||++|.||||+++.++|+..|..++|+|+.+++.++..++.. .|. .|
T Consensus 316 ~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~-~G~~~~~~g~~ge 394 (767)
T PRK05371 316 NGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRE-NGLVRAPGGYQGE 394 (767)
T ss_pred hhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhc-CCceeccCCcCCc
Confidence 854 2334 589999999999999999999889999999999999887544311 000 01
Q ss_pred ----ccccC-----CC----CCHHHH-------------------HHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeC
Q 004766 611 ----VSDFG-----CS----EEEEEF-------------------YWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD 658 (732)
Q Consensus 611 ----~~~~g-----~p----~~~~~~-------------------~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~ 658 (732)
..++. .+ ...+.+ +++.+.++..++.+ +++|+|++||.
T Consensus 395 d~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~k----------IkvPvLlIhGw 464 (767)
T PRK05371 395 DLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADK----------IKASVLVVHGL 464 (767)
T ss_pred chhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhC----------CCCCEEEEeeC
Confidence 00000 00 000111 11233344444444 88999999999
Q ss_pred CCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 659 HDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 659 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
+|.+|++.++.+++++|++. +.+..+.+. ..+|+...... ..+....+..||.++|..
T Consensus 465 ~D~~V~~~~s~~ly~aL~~~----------g~pkkL~l~-~g~H~~~~~~~-~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 465 NDWNVKPKQVYQWWDALPEN----------GVPKKLFLH-QGGHVYPNNWQ-SIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred CCCCCChHHHHHHHHHHHhc----------CCCeEEEEe-CCCccCCCchh-HHHHHHHHHHHHHhcccc
Confidence 99999999999999999987 788888776 45787654333 356677889999999853
No 40
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.72 E-value=7e-16 Score=161.05 Aligned_cols=228 Identities=19% Similarity=0.197 Sum_probs=160.0
Q ss_pred EccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcC-hhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccc
Q 004766 457 PSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFS-VSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 535 (732)
Q Consensus 457 ~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~-~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~ 535 (732)
....+ ..+++.++.| .....++.|+|||+|||.......... .....++...|++|+.+|||-..+.
T Consensus 57 ~~~~~-~~~~~~~y~p-~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~---------- 124 (312)
T COG0657 57 AGPSG-DGVPVRVYRP-DRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH---------- 124 (312)
T ss_pred cCCCC-CceeEEEECC-CCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC----------
Confidence 34456 6799999999 323456799999999997665444444 4456677779999999999987763
Q ss_pred cCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhhCCC----eeeEEEEcCCcccccccccCCCCC
Q 004766 536 AKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRPD----LFGCALAHVGVMDMLRYHKFTIGH 608 (732)
Q Consensus 536 ~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p~----~f~a~v~~~p~~d~~~~~~~~~~~ 608 (732)
.-...++|+.+++.|+.++. -.||++|+++|.|+||.|++.++.+..+ .-++.+..+|.+|... .. .
T Consensus 125 -~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~-~--- 198 (312)
T COG0657 125 -PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SA-A--- 198 (312)
T ss_pred -CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cc-c---
Confidence 34567899999999999874 3789999999999999999998886333 5688899999998865 11 0
Q ss_pred ccccccCC--CCCHHHHH--HHH------------hcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHH
Q 004766 609 AWVSDFGC--SEEEEEFY--WLI------------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLL 672 (732)
Q Consensus 609 ~~~~~~g~--p~~~~~~~--~~~------------~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~ 672 (732)
. ..+++. .-...... ... ..||+.... . .-.||+||++|+.|...+ ++..+.
T Consensus 199 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~-~--------~~lPP~~i~~a~~D~l~~--~~~~~a 266 (312)
T COG0657 199 S-LPGYGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASDD-L--------SGLPPTLIQTAEFDPLRD--EGEAYA 266 (312)
T ss_pred c-hhhcCCccccCHHHHHHHHHHHhCcCccccCCCccCcccccc-c--------cCCCCEEEEecCCCcchh--HHHHHH
Confidence 0 011111 11111000 111 123332221 1 126899999999999888 999999
Q ss_pred HHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCch-HHHHHHHHHHHHHHHH
Q 004766 673 ATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT-QKMIDEAADRYGFMAK 724 (732)
Q Consensus 673 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~~fl~~ 724 (732)
++|+++ |++++++.+++..|++.... ....+.+..+..|+..
T Consensus 267 ~~L~~a----------gv~~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 267 ERLRAA----------GVPVELRVYPGMIHGFDLLTGPEARSALRQIAAFLRA 309 (312)
T ss_pred HHHHHc----------CCeEEEEEeCCcceeccccCcHHHHHHHHHHHHHHHH
Confidence 999998 99999999999999884221 2234445666677663
No 41
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.72 E-value=2e-15 Score=164.76 Aligned_cols=243 Identities=17% Similarity=0.147 Sum_probs=164.8
Q ss_pred CcEEEEEEeccC--CceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEE
Q 004766 143 AKYLAYALSYSG--SDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEF 220 (732)
Q Consensus 143 G~~la~~~~~~G--~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v 220 (732)
+++|||+....+ ...++|+++|.+++.....+..+.....++|||||+.|+|++... ...+|
T Consensus 167 ~~~ia~v~~~~~~~~~~~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~----------------~~~~l 230 (433)
T PRK04922 167 WTRIAYVTVSGAGGAMRYALQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFER----------------GRSAI 230 (433)
T ss_pred cceEEEEEEeCCCCCceEEEEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCC----------------CCcEE
Confidence 467999876433 335789999998776443333332347899999999999987432 23579
Q ss_pred EEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee
Q 004766 221 YYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID 300 (732)
Q Consensus 221 ~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~ 300 (732)
|++++.++... .+... ++....+.|||||++|++..+... ..+||++++.++. .+.++.
T Consensus 231 ~~~dl~~g~~~--~l~~~---~g~~~~~~~SpDG~~l~~~~s~~g--~~~Iy~~d~~~g~--------------~~~lt~ 289 (433)
T PRK04922 231 YVQDLATGQRE--LVASF---RGINGAPSFSPDGRRLALTLSRDG--NPEIYVMDLGSRQ--------------LTRLTN 289 (433)
T ss_pred EEEECCCCCEE--EeccC---CCCccCceECCCCCEEEEEEeCCC--CceEEEEECCCCC--------------eEECcc
Confidence 99999776432 23222 223346899999999998876544 4689999998753 334443
Q ss_pred cccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEE
Q 004766 301 GFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIR 378 (732)
Q Consensus 301 ~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~ 378 (732)
.... ....|+|||+.|+|.+++.+ ..+||.++++++. .+.++... .....+.|+++ +.+++....++..+|+++
T Consensus 290 ~~~~~~~~~~spDG~~l~f~sd~~g-~~~iy~~dl~~g~-~~~lt~~g--~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~ 365 (433)
T PRK04922 290 HFGIDTEPTWAPDGKSIYFTSDRGG-RPQIYRVAASGGS-AERLTFQG--NYNARASVSPDGKKIAMVHGSGGQYRIAVM 365 (433)
T ss_pred CCCCccceEECCCCCEEEEEECCCC-CceEEEEECCCCC-eEEeecCC--CCccCEEECCCCCEEEEEECCCCceeEEEE
Confidence 3221 22469999999999988754 4589999998776 45555332 22345778875 566666666666789999
Q ss_pred eCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 379 DLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 379 d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
++++|+. +.|+... ....+++++||+.++++... ..-..+|.+++.++
T Consensus 366 d~~~g~~-~~Lt~~~-~~~~p~~spdG~~i~~~s~~-~g~~~L~~~~~~g~ 413 (433)
T PRK04922 366 DLSTGSV-RTLTPGS-LDESPSFAPNGSMVLYATRE-GGRGVLAAVSTDGR 413 (433)
T ss_pred ECCCCCe-EECCCCC-CCCCceECCCCCEEEEEEec-CCceEEEEEECCCC
Confidence 9987765 5665322 33456789999988877654 33467999998654
No 42
>PRK10749 lysophospholipase L2; Provisional
Probab=99.71 E-value=5.4e-16 Score=163.12 Aligned_cols=255 Identities=13% Similarity=0.078 Sum_probs=150.3
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHh
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHK 531 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 531 (732)
+...+...|| .++.+....|. .+.|+||++||..+.. ..|.. ....+.++||.|+++|+||.|..+.....
T Consensus 31 ~~~~~~~~~g-~~l~~~~~~~~-----~~~~~vll~HG~~~~~--~~y~~-~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 101 (330)
T PRK10749 31 EEAEFTGVDD-IPIRFVRFRAP-----HHDRVVVICPGRIESY--VKYAE-LAYDLFHLGYDVLIIDHRGQGRSGRLLDD 101 (330)
T ss_pred cceEEEcCCC-CEEEEEEccCC-----CCCcEEEEECCccchH--HHHHH-HHHHHHHCCCeEEEEcCCCCCCCCCCCCC
Confidence 4456667799 89888877653 2457899999975432 12332 33334459999999999999876432211
Q ss_pred cccc--cCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc------
Q 004766 532 GGAL--AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK------ 603 (732)
Q Consensus 532 ~~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------ 603 (732)
...+ ..-....+|+.+.++.+.+. .+..++.++|+||||+++..++.++|+.++++|+.+|.........
T Consensus 102 ~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~ 179 (330)
T PRK10749 102 PHRGHVERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARR 179 (330)
T ss_pred CCcCccccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHH
Confidence 0000 01112234555555554433 2346899999999999999999999999999999988653210000
Q ss_pred -------CC--------CCCcccccc-C-C--CCCHHHH----HHHHhcCcccCCC--------CCC----CCCCCCCCC
Q 004766 604 -------FT--------IGHAWVSDF-G-C--SEEEEEF----YWLIKYSPLHNVR--------RPW----EQNPDKPFQ 648 (732)
Q Consensus 604 -------~~--------~~~~~~~~~-g-~--p~~~~~~----~~~~~~sp~~~~~--------~~~----~~~~~~~~~ 648 (732)
.. ....|.... . + ..+++.+ +.+. .+|..... ... ........+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 258 (330)
T PRK10749 180 ILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYA-DDPELRVGGPTYHWVRESILAGEQVLAGAGDI 258 (330)
T ss_pred HHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHH-hCCCcccCCCcHHHHHHHHHHHHHHHhhccCC
Confidence 00 000111000 0 0 0112111 1111 12211000 000 000001137
Q ss_pred CCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchH-HHHHHHHHHHHHHHHH
Q 004766 649 YPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQ-KMIDEAADRYGFMAKM 725 (732)
Q Consensus 649 ~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~~fl~~~ 725 (732)
..|+||+||.+|..|++..+.+++++++.+ ......+++++++++||....... .+...+..+.+||.++
T Consensus 259 ~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~-------~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 259 TTPLLLLQAEEERVVDNRMHDRFCEARTAA-------GHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHHHhhc-------CCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 889999999999999999999999998865 100134589999999998764322 2356778889998764
No 43
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.70 E-value=4.6e-15 Score=161.27 Aligned_cols=240 Identities=13% Similarity=0.100 Sum_probs=161.0
Q ss_pred cEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEE
Q 004766 144 KYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYH 223 (732)
Q Consensus 144 ~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 223 (732)
.+|||+...++ ..+|+++|.++......+........++|||||+.|+|++... ...+||++
T Consensus 164 ~~iayv~~~~~--~~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~----------------~~~~I~~~ 225 (427)
T PRK02889 164 TRIAYVIKTGN--RYQLQISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFES----------------KKPVVYVH 225 (427)
T ss_pred cEEEEEEccCC--ccEEEEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEccC----------------CCcEEEEE
Confidence 57999985444 3789999987655333222222347899999999999987532 23469999
Q ss_pred ECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeeccc
Q 004766 224 FLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD 303 (732)
Q Consensus 224 ~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 303 (732)
++.++... .+... ++....+.|||||+.|++..+... ..+||++|+.++. .+.++....
T Consensus 226 dl~~g~~~--~l~~~---~g~~~~~~~SPDG~~la~~~~~~g--~~~Iy~~d~~~~~--------------~~~lt~~~~ 284 (427)
T PRK02889 226 DLATGRRR--VVANF---KGSNSAPAWSPDGRTLAVALSRDG--NSQIYTVNADGSG--------------LRRLTQSSG 284 (427)
T ss_pred ECCCCCEE--EeecC---CCCccceEECCCCCEEEEEEccCC--CceEEEEECCCCC--------------cEECCCCCC
Confidence 99876432 23222 123357899999999998765544 5789999987642 334443221
Q ss_pred c-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCC
Q 004766 304 A-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLK 381 (732)
Q Consensus 304 ~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~ 381 (732)
. ....|+|||++|+|.+++.+ ..+||.+++.++. .+.++.+. .......|+++ +.+++....++..+|+++|++
T Consensus 285 ~~~~~~wSpDG~~l~f~s~~~g-~~~Iy~~~~~~g~-~~~lt~~g--~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~ 360 (427)
T PRK02889 285 IDTEPFFSPDGRSIYFTSDRGG-APQIYRMPASGGA-AQRVTFTG--SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLA 360 (427)
T ss_pred CCcCeEEcCCCCEEEEEecCCC-CcEEEEEECCCCc-eEEEecCC--CCcCceEECCCCCEEEEEEccCCcEEEEEEECC
Confidence 1 12459999999999888654 4689999988765 45554332 22335677765 566666666666789999998
Q ss_pred CCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 382 NGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 382 ~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+|+. +.++.. .....++++||++.++|+...-. -..+|.+++.+.
T Consensus 361 ~g~~-~~lt~~-~~~~~p~~spdg~~l~~~~~~~g-~~~l~~~~~~g~ 405 (427)
T PRK02889 361 TGQV-TALTDT-TRDESPSFAPNGRYILYATQQGG-RSVLAAVSSDGR 405 (427)
T ss_pred CCCe-EEccCC-CCccCceECCCCCEEEEEEecCC-CEEEEEEECCCC
Confidence 7765 566533 22346778999998888765433 357888887543
No 44
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.70 E-value=9.7e-16 Score=148.29 Aligned_cols=254 Identities=13% Similarity=0.088 Sum_probs=162.7
Q ss_pred EEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHH
Q 004766 451 VHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWH 530 (732)
Q Consensus 451 ~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~ 530 (732)
...-.+++.+| .++-.....|..- ..+.-+|+++||..+. ....|... ...|+..||.|+..|++|+|....
T Consensus 27 ~~~~~~~n~rG-~~lft~~W~p~~~--~~pr~lv~~~HG~g~~-~s~~~~~~-a~~l~~~g~~v~a~D~~GhG~SdG--- 98 (313)
T KOG1455|consen 27 YSESFFTNPRG-AKLFTQSWLPLSG--TEPRGLVFLCHGYGEH-SSWRYQST-AKRLAKSGFAVYAIDYEGHGRSDG--- 98 (313)
T ss_pred eeeeeEEcCCC-CEeEEEecccCCC--CCCceEEEEEcCCccc-chhhHHHH-HHHHHhCCCeEEEeeccCCCcCCC---
Confidence 34456778899 8998887877652 2567789999996543 23455543 455566999999999999885320
Q ss_pred hcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc-------
Q 004766 531 KGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK------- 603 (732)
Q Consensus 531 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------- 603 (732)
..+....-...++|+++-.+....+.--.--...++|+||||.+++.++.+.|+.|.++|..+|.+-+..-.+
T Consensus 99 l~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~ 178 (313)
T KOG1455|consen 99 LHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVIS 178 (313)
T ss_pred CcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHH
Confidence 0111111223456666666665555333335689999999999999999999999999999999764432211
Q ss_pred -----CCCCCccc----cccCCC--CCHHHHHHHHhcCcccCCCCC------------CCCCCCCCCCCCeEEEEeeCCC
Q 004766 604 -----FTIGHAWV----SDFGCS--EEEEEFYWLIKYSPLHNVRRP------------WEQNPDKPFQYPSTLLLTADHD 660 (732)
Q Consensus 604 -----~~~~~~~~----~~~g~p--~~~~~~~~~~~~sp~~~~~~~------------~~~~~~~~~~~~p~Li~~g~~D 660 (732)
....+.|. .....+ .+++.. .+...+|+-..... .+.-+-...+.-|+||+||+.|
T Consensus 179 ~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r-~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD 257 (313)
T KOG1455|consen 179 ILTLLSKLIPTWKIVPTKDIIDVAFKDPEKR-KILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDD 257 (313)
T ss_pred HHHHHHHhCCceeecCCccccccccCCHHHH-HHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCC
Confidence 01112232 001111 334332 22333444211100 0000000137889999999999
Q ss_pred CCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCC--chHHHHHHHHHHHHHHHHH
Q 004766 661 DRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGL--PTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 661 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~ 725 (732)
.++.+.-+.++++... ..+..+++|||+-|.... +....-..+.++.+||.++
T Consensus 258 ~VTDp~~Sk~Lye~A~------------S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 258 KVTDPKVSKELYEKAS------------SSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cccCcHHHHHHHHhcc------------CCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999998755 456789999999998763 4444567889999999865
No 45
>PRK11460 putative hydrolase; Provisional
Probab=99.70 E-value=8.8e-16 Score=152.16 Aligned_cols=186 Identities=14% Similarity=0.140 Sum_probs=130.0
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCC----CCchhHHhcccccCCccH-------HHHHHH
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGG----EYGEEWHKGGALAKKQNC-------FDDFIS 547 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g----~~g~~~~~~~~~~~~~~~-------~~D~~~ 547 (732)
.+.|+||++||..++.. .|. .+...|...++.+.++.+||.. ..|..|+.... ....+. .+.+.+
T Consensus 14 ~~~~~vIlLHG~G~~~~--~~~-~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~-~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV--AMG-EIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQG-ITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCCcEEEEEeCCCCChH--HHH-HHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCC-CCccchHHHHHHHHHHHHH
Confidence 46799999999776543 233 2345555466655566666632 23667775311 111122 234455
Q ss_pred HHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHH
Q 004766 548 ASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLI 627 (732)
Q Consensus 548 ~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 627 (732)
.++++.++..++++||+++|+|+||.+++.++.++|++++++|+..|.+. . .+.
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~---------------~--~~~--------- 143 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA---------------S--LPE--------- 143 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc---------------c--ccc---------
Confidence 66777777667889999999999999999999888998888876655210 0 000
Q ss_pred hcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc
Q 004766 628 KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP 707 (732)
Q Consensus 628 ~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 707 (732)
. . ...+|+|++||.+|++||++.+.+++++|++. +.++++++|+++||.+..
T Consensus 144 --~------~---------~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~----------g~~~~~~~~~~~gH~i~~- 195 (232)
T PRK11460 144 --T------A---------PTATTIHLIHGGEDPVIDVAHAVAAQEALISL----------GGDVTLDIVEDLGHAIDP- 195 (232)
T ss_pred --c------c---------cCCCcEEEEecCCCCccCHHHHHHHHHHHHHC----------CCCeEEEEECCCCCCCCH-
Confidence 0 0 13579999999999999999999999999987 888999999999999863
Q ss_pred hHHHHHHHHHHHHHHHHHhC
Q 004766 708 TQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 708 ~~~~~~~~~~~~~fl~~~l~ 727 (732)
++...+.+||.+.|.
T Consensus 196 -----~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 196 -----RLMQFALDRLRYTVP 210 (232)
T ss_pred -----HHHHHHHHHHHHHcc
Confidence 334456667776653
No 46
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.70 E-value=6.1e-15 Score=161.39 Aligned_cols=251 Identities=13% Similarity=0.116 Sum_probs=166.6
Q ss_pred EEeEEECCCCcEEEEEEecc--CCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 134 LIKVSVSEDAKYLAYALSYS--GSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~--G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
+.+.... -.++|||+.... +.+.++|+++|.+++.....+........++|||||+.|+|++...
T Consensus 154 ltg~~g~-f~~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~------------ 220 (430)
T PRK00178 154 LTGIKGA-FSTRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQ------------ 220 (430)
T ss_pred HhCCCcc-ceeeEEEEEeeCCCCCcceEEEEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCC------------
Confidence 3344333 456799987543 2346799999998876433322222347899999999999987532
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
...+||++++.++..+ .+... .+....+.|||||++|++...... ..+||++|++++.
T Consensus 221 ----~~~~l~~~~l~~g~~~--~l~~~---~g~~~~~~~SpDG~~la~~~~~~g--~~~Iy~~d~~~~~----------- 278 (430)
T PRK00178 221 ----KRPRIFVQNLDTGRRE--QITNF---EGLNGAPAWSPDGSKLAFVLSKDG--NPEIYVMDLASRQ----------- 278 (430)
T ss_pred ----CCCEEEEEECCCCCEE--EccCC---CCCcCCeEECCCCCEEEEEEccCC--CceEEEEECCCCC-----------
Confidence 2347999999876543 23222 123346899999999998876544 4789999998753
Q ss_pred CCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEec
Q 004766 292 LLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLS 369 (732)
Q Consensus 292 ~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~ 369 (732)
.+.++...... ...|+|||+.|+|.+++.+ ..+||.+++.++. .+.++... .......|+++ +.+++....
T Consensus 279 ---~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g-~~~iy~~d~~~g~-~~~lt~~~--~~~~~~~~Spdg~~i~~~~~~ 351 (430)
T PRK00178 279 ---LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGG-KPQIYKVNVNGGR-AERVTFVG--NYNARPRLSADGKTLVMVHRQ 351 (430)
T ss_pred ---eEEcccCCCCcCCeEECCCCCEEEEEECCCC-CceEEEEECCCCC-EEEeecCC--CCccceEECCCCCEEEEEEcc
Confidence 33444322222 2469999999999988754 4689999998876 55555332 22234567764 567777766
Q ss_pred CCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 370 DVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
++...|+++|+++|+. +.|+... ....+++++||..++|+.... .-..+|.+++.++
T Consensus 352 ~~~~~l~~~dl~tg~~-~~lt~~~-~~~~p~~spdg~~i~~~~~~~-g~~~l~~~~~~g~ 408 (430)
T PRK00178 352 DGNFHVAAQDLQRGSV-RILTDTS-LDESPSVAPNGTMLIYATRQQ-GRGVLMLVSINGR 408 (430)
T ss_pred CCceEEEEEECCCCCE-EEccCCC-CCCCceECCCCCEEEEEEecC-CceEEEEEECCCC
Confidence 6667899999987765 6665432 222457889999887765432 2356888887654
No 47
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.70 E-value=8.8e-15 Score=159.51 Aligned_cols=242 Identities=15% Similarity=0.148 Sum_probs=162.5
Q ss_pred cEEEEEEeccCC-ceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEE
Q 004766 144 KYLAYALSYSGS-DWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYY 222 (732)
Q Consensus 144 ~~la~~~~~~G~-e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 222 (732)
.+|||+....+. ..++|+++|.+++.....+........+.|||||+.|+|++... ...+||+
T Consensus 183 ~riayv~~~~~~~~~~~l~i~d~dG~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~----------------g~~~L~~ 246 (448)
T PRK04792 183 TRIAYVVVNDKDKYPYQLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFEN----------------RKAEIFV 246 (448)
T ss_pred CEEEEEEeeCCCCCceEEEEEeCCCCCceEeecCCCcccCceECCCCCEEEEEEecC----------------CCcEEEE
Confidence 678888765543 24799999998765332222222346899999999999987532 2357999
Q ss_pred EECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc
Q 004766 223 HFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF 302 (732)
Q Consensus 223 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~ 302 (732)
+++.++... .+...+ .....+.|||||++|++...... ..+||++|++++. .+.++...
T Consensus 247 ~dl~tg~~~--~lt~~~---g~~~~~~wSPDG~~La~~~~~~g--~~~Iy~~dl~tg~--------------~~~lt~~~ 305 (448)
T PRK04792 247 QDIYTQVRE--KVTSFP---GINGAPRFSPDGKKLALVLSKDG--QPEIYVVDIATKA--------------LTRITRHR 305 (448)
T ss_pred EECCCCCeE--EecCCC---CCcCCeeECCCCCEEEEEEeCCC--CeEEEEEECCCCC--------------eEECccCC
Confidence 999876432 333221 22346899999999998876544 5789999998753 33444432
Q ss_pred c-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeC
Q 004766 303 D-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDL 380 (732)
Q Consensus 303 ~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~ 380 (732)
. .....|+|||+.|+|.+++++ ..+||.+|++++. .+.++... .......|+++ +.+++....++..+|+++|+
T Consensus 306 ~~~~~p~wSpDG~~I~f~s~~~g-~~~Iy~~dl~~g~-~~~Lt~~g--~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl 381 (448)
T PRK04792 306 AIDTEPSWHPDGKSLIFTSERGG-KPQIYRVNLASGK-VSRLTFEG--EQNLGGSITPDGRSMIMVNRTNGKFNIARQDL 381 (448)
T ss_pred CCccceEECCCCCEEEEEECCCC-CceEEEEECCCCC-EEEEecCC--CCCcCeeECCCCCEEEEEEecCCceEEEEEEC
Confidence 2 123469999999999887654 4689999998876 55564332 12234567765 56777777677778999999
Q ss_pred CCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 381 KNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 381 ~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
++|+. +.++... .....+++|||+.++|+... .....+|.++...+
T Consensus 382 ~~g~~-~~lt~~~-~d~~ps~spdG~~I~~~~~~-~g~~~l~~~~~~G~ 427 (448)
T PRK04792 382 ETGAM-QVLTSTR-LDESPSVAPNGTMVIYSTTY-QGKQVLAAVSIDGR 427 (448)
T ss_pred CCCCe-EEccCCC-CCCCceECCCCCEEEEEEec-CCceEEEEEECCCC
Confidence 87765 5565321 22245688999988876654 33456888887544
No 48
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.68 E-value=7.6e-16 Score=146.20 Aligned_cols=219 Identities=17% Similarity=0.158 Sum_probs=153.5
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHH-HhcCcEEEEEcccCCCCCchh
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILM-RHLGAVFCIANIRGGGEYGEE 528 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l-~~~G~~v~~~~~rG~g~~g~~ 528 (732)
.++.+..++..| -.+-+..+.|.. ...++++|.||--. +.+-..++..-| ...++.++..||+|.|..+..
T Consensus 34 ~v~v~~~~t~rg-n~~~~~y~~~~~----~~~~~lly~hGNa~---Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ 105 (258)
T KOG1552|consen 34 FVEVFKVKTSRG-NEIVCMYVRPPE----AAHPTLLYSHGNAA---DLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGK 105 (258)
T ss_pred ccceEEeecCCC-CEEEEEEEcCcc----ccceEEEEcCCccc---chHHHHHHHHHHhhcccceEEEEecccccccCCC
Confidence 344455666677 678777777754 35799999999722 222111222222 224899999999997753222
Q ss_pred HHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccC-CCC
Q 004766 529 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKF-TIG 607 (732)
Q Consensus 529 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~-~~~ 607 (732)
....|.++|+.++.+||.++.- .+++|+++|+|+|...+..++.+.| .+|+|+.+|+.+.++.+.. ...
T Consensus 106 -------psE~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~~~ 175 (258)
T KOG1552|consen 106 -------PSERNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDTKT 175 (258)
T ss_pred -------cccccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCcce
Confidence 2223889999999999998854 7899999999999999999999988 8999999999998876542 221
Q ss_pred CccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCC
Q 004766 608 HAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSP 687 (732)
Q Consensus 608 ~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 687 (732)
..|...|- -+..++. +++|+||+||.+|++|+..|+.+++++.++.
T Consensus 176 ~~~~d~f~---------------~i~kI~~----------i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~--------- 221 (258)
T KOG1552|consen 176 TYCFDAFP---------------NIEKISK----------ITCPVLIIHGTDDEVVDFSHGKALYERCKEK--------- 221 (258)
T ss_pred EEeecccc---------------ccCccee----------ccCCEEEEecccCceecccccHHHHHhcccc---------
Confidence 23333331 1445554 8899999999999999999999999987753
Q ss_pred CCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 688 QTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 688 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
++-....++||....-..+ ....+..|+...+.
T Consensus 222 ----~epl~v~g~gH~~~~~~~~---yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 222 ----VEPLWVKGAGHNDIELYPE---YIEHLRRFISSVLP 254 (258)
T ss_pred ----CCCcEEecCCCcccccCHH---HHHHHHHHHHHhcc
Confidence 5556667999976543222 33334456555443
No 49
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.68 E-value=3.7e-15 Score=158.63 Aligned_cols=242 Identities=13% Similarity=0.050 Sum_probs=155.3
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhH
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 529 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~ 529 (732)
......+...+| ..+++..+.|.. ..+.|+||++||..+... .|. .+...|+++||.|+++|+||.|.....+
T Consensus 109 ~~~~~~~~~~~~-~~l~~~~~~p~~---~~~~~~Vl~lHG~~~~~~--~~~-~~a~~L~~~Gy~V~~~D~rGhG~S~~~~ 181 (395)
T PLN02652 109 RWATSLFYGARR-NALFCRSWAPAA---GEMRGILIIIHGLNEHSG--RYL-HFAKQLTSCGFGVYAMDWIGHGGSDGLH 181 (395)
T ss_pred eEEEEEEECCCC-CEEEEEEecCCC---CCCceEEEEECCchHHHH--HHH-HHHHHHHHCCCEEEEeCCCCCCCCCCCC
Confidence 345566777888 899999888854 235689999999765421 233 3455566689999999999988653321
Q ss_pred HhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCC---eeeEEEEcCCcccccccccC--
Q 004766 530 HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD---LFGCALAHVGVMDMLRYHKF-- 604 (732)
Q Consensus 530 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~p~~d~~~~~~~-- 604 (732)
. .........+|+.++++++.... ...++.++|+|+||++++.++. +|+ .++++|+.+|..++......
T Consensus 182 ~---~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~ 255 (395)
T PLN02652 182 G---YVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVG 255 (395)
T ss_pred C---CCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHH
Confidence 1 01111223577888888877541 2247999999999999987764 564 78999999998654321100
Q ss_pred -------CCCCcc----ccccCCC--CCHHHHHHHHhcCcc----------------------cCCCCCCCCCCCCCCCC
Q 004766 605 -------TIGHAW----VSDFGCS--EEEEEFYWLIKYSPL----------------------HNVRRPWEQNPDKPFQY 649 (732)
Q Consensus 605 -------~~~~~~----~~~~g~p--~~~~~~~~~~~~sp~----------------------~~~~~~~~~~~~~~~~~ 649 (732)
...+.+ ...++.+ .+++...... .+|+ .++. .+.
T Consensus 256 ~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~-~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~----------~I~ 324 (395)
T PLN02652 256 AVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKY-SDPLVYTGPIRVRTGHEILRISSYLTRNFK----------SVT 324 (395)
T ss_pred HHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHh-cCCCcccCCchHHHHHHHHHHHHHHHhhcc----------cCC
Confidence 000000 0001111 1111110000 0111 1122 378
Q ss_pred CeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 650 PSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 650 ~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
.|+||+||.+|..||+.++.++++++. +....++++++++|....... ..+.++.+.+||..+++.
T Consensus 325 vPvLIi~G~~D~vvp~~~a~~l~~~~~------------~~~k~l~~~~ga~H~l~~e~~-~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 325 VPFMVLHGTADRVTDPLASQDLYNEAA------------SRHKDIKLYDGFLHDLLFEPE-REEVGRDIIDWMEKRLDL 390 (395)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHhcC------------CCCceEEEECCCeEEeccCCC-HHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999988865 334577889999998754422 356778899999998864
No 50
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.64 E-value=1.4e-15 Score=149.52 Aligned_cols=185 Identities=17% Similarity=0.137 Sum_probs=123.7
Q ss_pred EEEEcCCCCccCCCCcChhHH-HHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHc---CCCC
Q 004766 484 LLYGYGGFNISVTPSFSVSRT-ILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA---GYTQ 559 (732)
Q Consensus 484 vv~~hG~~~~~~~~~~~~~~~-~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d 559 (732)
|||+|||............+. .++.++|++|+.+|||-+.+ ..-...++|+.++++|+.++ --.|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~-----------~~~p~~~~D~~~a~~~l~~~~~~~~~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE-----------APFPAALEDVKAAYRWLLKNADKLGID 69 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT-----------SSTTHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc-----------ccccccccccccceeeecccccccccc
Confidence 799999976644444434443 44445899999999997654 23356789999999999987 2368
Q ss_pred CCcEEEEecChhHHHHHHHHhhCCC----eeeEEEEcCCcccccccccCCCCCccc--cccC-CC-CCHHHHH----HHH
Q 004766 560 SRKLCIEGGSNGGLLVGACINQRPD----LFGCALAHVGVMDMLRYHKFTIGHAWV--SDFG-CS-EEEEEFY----WLI 627 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~p~----~f~a~v~~~p~~d~~~~~~~~~~~~~~--~~~g-~p-~~~~~~~----~~~ 627 (732)
+++|+++|.|+||.|++.++.+..+ ..+++++.+|+.|+..... ..+. .++. .+ -.....+ .+.
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDG----PSYDDSNENKDDPFLPAPKIDWFWKLYL 145 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSC----HHHHHHHHHSTTSSSBHHHHHHHHHHHH
T ss_pred ccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccc----cccccccccccccccccccccccccccc
Confidence 9999999999999999998874322 4899999999888711100 0010 0010 01 0111111 111
Q ss_pred --------hcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCC
Q 004766 628 --------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERK 699 (732)
Q Consensus 628 --------~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 699 (732)
..||+.. ... ...||+||++|+.|..+ .++.+|+++|++. |++++++++++
T Consensus 146 ~~~~~~~~~~sp~~~-~~~--------~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~----------gv~v~~~~~~g 204 (211)
T PF07859_consen 146 PGSDRDDPLASPLNA-SDL--------KGLPPTLIIHGEDDVLV--DDSLRFAEKLKKA----------GVDVELHVYPG 204 (211)
T ss_dssp STGGTTSTTTSGGGS-SCC--------TTCHEEEEEEETTSTTH--HHHHHHHHHHHHT----------T-EEEEEEETT
T ss_pred ccccccccccccccc-ccc--------ccCCCeeeeccccccch--HHHHHHHHHHHHC----------CCCEEEEEECC
Confidence 2355544 121 25799999999999764 6899999999998 99999999999
Q ss_pred CCCCC
Q 004766 700 AGHGV 704 (732)
Q Consensus 700 ~gH~~ 704 (732)
.+|++
T Consensus 205 ~~H~f 209 (211)
T PF07859_consen 205 MPHGF 209 (211)
T ss_dssp EETTG
T ss_pred CeEEe
Confidence 99986
No 51
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.63 E-value=6.6e-15 Score=141.52 Aligned_cols=195 Identities=13% Similarity=0.099 Sum_probs=127.4
Q ss_pred EEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCch--hHHhcccccCCccHHH
Q 004766 466 PMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE--EWHKGGALAKKQNCFD 543 (732)
Q Consensus 466 ~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~--~~~~~~~~~~~~~~~~ 543 (732)
.+.|+.|+... .++.|+||.+||+.+......-...+..+.+++||+|+.|+......... .|.. .....+.....
T Consensus 2 ~Y~lYvP~~~~-~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~-~~~~~g~~d~~ 79 (220)
T PF10503_consen 2 SYRLYVPPGAP-RGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFS-DDQQRGGGDVA 79 (220)
T ss_pred cEEEecCCCCC-CCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccc-cccccCccchh
Confidence 46788898753 35789999999997764322212235677888999999998653332333 3444 22223344556
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHH
Q 004766 544 DFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEF 623 (732)
Q Consensus 544 D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~ 623 (732)
.+.+.+++++++.-+|++||.+.|.|+||.|+..++..+||+|+|+...+++.--......... .-+ .-|....+...
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~-~~m-~~g~~~~p~~~ 157 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASAL-SAM-RSGPRPAPAAA 157 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHH-HHh-hCCCCCChHHH
Confidence 6778899999998899999999999999999999999999999999877765321111100000 000 11222222221
Q ss_pred HHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHh
Q 004766 624 YWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYV 678 (732)
Q Consensus 624 ~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~ 678 (732)
..-...++ . ....|++|+||..|..|.+..+.++++++...
T Consensus 158 ~~a~~~~g-----~---------~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 158 WGARSDAG-----A---------YPGYPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred HHhhhhcc-----C---------CCCCCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 11111111 0 01237889999999999999999999998865
No 52
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=1e-13 Score=151.08 Aligned_cols=235 Identities=14% Similarity=0.085 Sum_probs=150.7
Q ss_pred CcEEEEEEeccC-CceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEE
Q 004766 143 AKYLAYALSYSG-SDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFY 221 (732)
Q Consensus 143 G~~la~~~~~~G-~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~ 221 (732)
+++|||+....+ ...++|+++|.+++.....+........++|||||+.|+|++... ...+||
T Consensus 168 ~~ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~----------------~~~~i~ 231 (429)
T PRK01742 168 RTRIAYVVQKNGGSQPYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFEN----------------KKSQLV 231 (429)
T ss_pred CCEEEEEEEEcCCCceEEEEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecC----------------CCcEEE
Confidence 688999987654 345899999998776433232222347899999999999987532 234799
Q ss_pred EEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeec
Q 004766 222 YHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG 301 (732)
Q Consensus 222 ~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~ 301 (732)
++++.++... .+.... +....++|||||++|++...... ..+||++|+.++. .+.++..
T Consensus 232 i~dl~tg~~~--~l~~~~---g~~~~~~wSPDG~~La~~~~~~g--~~~Iy~~d~~~~~--------------~~~lt~~ 290 (429)
T PRK01742 232 VHDLRSGARK--VVASFR---GHNGAPAFSPDGSRLAFASSKDG--VLNIYVMGANGGT--------------PSQLTSG 290 (429)
T ss_pred EEeCCCCceE--EEecCC---CccCceeECCCCCEEEEEEecCC--cEEEEEEECCCCC--------------eEeeccC
Confidence 9999876432 232221 12236899999999999865433 4679999987642 3445443
Q ss_pred ccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEEEEEecCCeeEEEEEe
Q 004766 302 FDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRD 379 (732)
Q Consensus 302 ~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~~~~~~~g~~~l~~~d 379 (732)
... ....|+|||+.|+|.+++++ ..+||.++..++. ..++... . ....+++++ .+++... ..++++|
T Consensus 291 ~~~~~~~~wSpDG~~i~f~s~~~g-~~~I~~~~~~~~~--~~~l~~~--~--~~~~~SpDG~~ia~~~~----~~i~~~D 359 (429)
T PRK01742 291 AGNNTEPSWSPDGQSILFTSDRSG-SPQVYRMSASGGG--ASLVGGR--G--YSAQISADGKTLVMING----DNVVKQD 359 (429)
T ss_pred CCCcCCEEECCCCCEEEEEECCCC-CceEEEEECCCCC--eEEecCC--C--CCccCCCCCCEEEEEcC----CCEEEEE
Confidence 222 22469999999999887654 4689999987665 2333332 1 235677654 4555433 3577899
Q ss_pred CCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 380 LKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 380 ~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+.+|+. +.++.. .....++++|||..++++.. ...-..++.++...
T Consensus 360 l~~g~~-~~lt~~-~~~~~~~~sPdG~~i~~~s~-~g~~~~l~~~~~~G 405 (429)
T PRK01742 360 LTSGST-EVLSST-FLDESPSISPNGIMIIYSST-QGLGKVLQLVSADG 405 (429)
T ss_pred CCCCCe-EEecCC-CCCCCceECCCCCEEEEEEc-CCCceEEEEEECCC
Confidence 987765 444322 22345678899997776543 23334455555443
No 53
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.62 E-value=9.9e-15 Score=143.51 Aligned_cols=190 Identities=13% Similarity=0.090 Sum_probs=112.5
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHH-HHHhcCcEEEEEcccC------CCCCchhHHhcccccCCc-cHHHHHH----
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTI-LMRHLGAVFCIANIRG------GGEYGEEWHKGGALAKKQ-NCFDDFI---- 546 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~-~l~~~G~~v~~~~~rG------~g~~g~~~~~~~~~~~~~-~~~~D~~---- 546 (732)
...|+||++||..... ........ .+......++.++.+- +|..+..|+......... ...+++.
T Consensus 12 ~~~~lvi~LHG~G~~~---~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSE---DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp T-SEEEEEE--TTS-H---HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCceEEEEECCCCCCc---chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 5789999999964432 11111111 1223567787776542 122233787643222211 2223332
Q ss_pred ---HHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHH
Q 004766 547 ---SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEF 623 (732)
Q Consensus 547 ---~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~ 623 (732)
+.++.+++.+ ++++||.+.|+|+||.|++.++.++|+.|+++|+.+|.+-... .+ .
T Consensus 89 ~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~--------~~---------~--- 147 (216)
T PF02230_consen 89 RLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES--------EL---------E--- 147 (216)
T ss_dssp HHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC--------CC---------H---
T ss_pred HHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc--------cc---------c---
Confidence 2333334444 8999999999999999999999999999999999888653210 00 0
Q ss_pred HHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCC
Q 004766 624 YWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHG 703 (732)
Q Consensus 624 ~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 703 (732)
..... ...+|+|++||.+|+.||+..+.+.++.|++. +.+++++.|++.||.
T Consensus 148 ---------~~~~~---------~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~----------~~~v~~~~~~g~gH~ 199 (216)
T PF02230_consen 148 ---------DRPEA---------LAKTPILIIHGDEDPVVPFEWAEKTAEFLKAA----------GANVEFHEYPGGGHE 199 (216)
T ss_dssp ---------CCHCC---------CCTS-EEEEEETT-SSSTHHHHHHHHHHHHCT----------T-GEEEEEETT-SSS
T ss_pred ---------ccccc---------cCCCcEEEEecCCCCcccHHHHHHHHHHHHhc----------CCCEEEEEcCCCCCC
Confidence 00111 13579999999999999999999999999988 889999999999998
Q ss_pred CCCchHHHHHHHHHHHHHHHHHh
Q 004766 704 VGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 704 ~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
... +++..+.+||.+++
T Consensus 200 i~~------~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 200 ISP------EELRDLREFLEKHI 216 (216)
T ss_dssp --H------HHHHHHHHHHHHH-
T ss_pred CCH------HHHHHHHHHHhhhC
Confidence 752 45567788988764
No 54
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.62 E-value=3.5e-14 Score=145.31 Aligned_cols=249 Identities=13% Similarity=0.068 Sum_probs=158.2
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHh
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHK 531 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 531 (732)
.+..+.+.|| +.+.+....+.. .+..+||.+||...... .|.. +...|..+||.|+..|.||.|...+ .
T Consensus 10 ~~~~~~~~d~-~~~~~~~~~~~~----~~~g~Vvl~HG~~Eh~~--ry~~-la~~l~~~G~~V~~~D~RGhG~S~r--~- 78 (298)
T COG2267 10 TEGYFTGADG-TRLRYRTWAAPE----PPKGVVVLVHGLGEHSG--RYEE-LADDLAARGFDVYALDLRGHGRSPR--G- 78 (298)
T ss_pred ccceeecCCC-ceEEEEeecCCC----CCCcEEEEecCchHHHH--HHHH-HHHHHHhCCCEEEEecCCCCCCCCC--C-
Confidence 3456777899 999888776653 23389999999765431 2322 3456666999999999999998754 1
Q ss_pred cccccCCccHHHHHHHHHHHHHHcCC--CCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccc---ccc---
Q 004766 532 GGALAKKQNCFDDFISASEYLISAGY--TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR---YHK--- 603 (732)
Q Consensus 532 ~~~~~~~~~~~~D~~~~~~~l~~~~~--~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~---~~~--- 603 (732)
.......|+|.+..++.+++.-. .-..++.++||||||+++..++.+++..+.++|+.+|++.+.. ...
T Consensus 79 ---~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~ 155 (298)
T COG2267 79 ---QRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILAR 155 (298)
T ss_pred ---CcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHH
Confidence 11222336666666665554421 1236899999999999999999999999999999999988762 100
Q ss_pred --CCCCCccccc---------cCCC----CCHHHHHHHHhcCcccCCCC------------CC-CCCCCCCCCCCeEEEE
Q 004766 604 --FTIGHAWVSD---------FGCS----EEEEEFYWLIKYSPLHNVRR------------PW-EQNPDKPFQYPSTLLL 655 (732)
Q Consensus 604 --~~~~~~~~~~---------~g~p----~~~~~~~~~~~~sp~~~~~~------------~~-~~~~~~~~~~~p~Li~ 655 (732)
......+... .... .+++..+.+.+ +|+-.... .. ...+.+..+..|+||+
T Consensus 156 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~-dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll 234 (298)
T COG2267 156 LALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEA-DPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLL 234 (298)
T ss_pred HhcccccccccccccCcccccCcCcchhhcCHHHHHHHhc-CCccccCCccHHHHHHHHHhhcccchhccccccCCEEEE
Confidence 0000000000 0001 23333332222 33200000 00 0001122478899999
Q ss_pred eeCCCCCCC-chHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHH-HHHHHHHHHHHHHHHhC
Q 004766 656 TADHDDRVV-PLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQK-MIDEAADRYGFMAKMLG 727 (732)
Q Consensus 656 ~g~~D~~v~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~~fl~~~l~ 727 (732)
+|.+|..|+ .....++++++.. ..+.+++++++.|........ +.+.++++.+||.+++.
T Consensus 235 ~g~~D~vv~~~~~~~~~~~~~~~------------~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 235 QGGDDRVVDNVEGLARFFERAGS------------PDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred ecCCCccccCcHHHHHHHHhcCC------------CCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 999999999 5766666666542 226999999999997644332 26788889999988764
No 55
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.60 E-value=1e-13 Score=141.31 Aligned_cols=245 Identities=14% Similarity=0.084 Sum_probs=165.1
Q ss_pred EEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCc---cCCCCcChhHHHHHHhcCcEEEEEcccCCCCCch
Q 004766 451 VHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNI---SVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE 527 (732)
Q Consensus 451 ~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~---~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~ 527 (732)
...+.+. .. ..|+..||.|.......+.|+|||+|||... ...+.|+.....+..+.+.+|+.+|||-..|
T Consensus 63 ~~dv~~~--~~-~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPE--- 136 (336)
T KOG1515|consen 63 SKDVTID--PF-TNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPE--- 136 (336)
T ss_pred eeeeEec--CC-CCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCC---
Confidence 3444443 34 5799999999886544789999999999433 3345566555666677899999999998765
Q ss_pred hHHhcccccCCccHHHHHHHHHHHHHHc----CCCCCCcEEEEecChhHHHHHHHHhhC------CCeeeEEEEcCCccc
Q 004766 528 EWHKGGALAKKQNCFDDFISASEYLISA----GYTQSRKLCIEGGSNGGLLVGACINQR------PDLFGCALAHVGVMD 597 (732)
Q Consensus 528 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~----~~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~p~~d 597 (732)
..-+..++|..+|+.|+.++ ..+|++||+|+|-|+||.++..++.+. +-..++.|+..|++.
T Consensus 137 --------h~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 137 --------HPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred --------CCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 34466789999999999886 468999999999999999998887753 246799999999987
Q ss_pred ccccccCCCCCccccccCCC-CCHHHHHHH-HhcC---------cccCCCCCCCCC-CCCCCCCCeEEEEeeCCCCCCCc
Q 004766 598 MLRYHKFTIGHAWVSDFGCS-EEEEEFYWL-IKYS---------PLHNVRRPWEQN-PDKPFQYPSTLLLTADHDDRVVP 665 (732)
Q Consensus 598 ~~~~~~~~~~~~~~~~~g~p-~~~~~~~~~-~~~s---------p~~~~~~~~~~~-~~~~~~~~p~Li~~g~~D~~v~~ 665 (732)
.......... +. .-+.+ .....++.+ +.+. |+-|.-.. -.. .......||+||+++..|...
T Consensus 209 ~~~~~~~e~~--~~-~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~-~~~~d~~~~~lp~tlv~~ag~D~L~-- 282 (336)
T KOG1515|consen 209 GTDRTESEKQ--QN-LNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGN-SLAKDLSGLGLPPTLVVVAGYDVLR-- 282 (336)
T ss_pred CCCCCCHHHH--Hh-hcCCcchhHHHHHHHHHHhCCCCCCCcCCcccccccc-ccccCccccCCCceEEEEeCchhhh--
Confidence 6544321000 00 00011 111111111 1111 11111110 000 011236788999999999765
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCC--Cc-hHHHHHHHHHHHHHHHHH
Q 004766 666 LHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVG--LP-TQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 666 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~--~~-~~~~~~~~~~~~~fl~~~ 725 (732)
.+...++++|+++ |.++.+..+++++|++. .+ .....+....+.+|+.+.
T Consensus 283 D~~~~Y~~~Lkk~----------Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 283 DEGLAYAEKLKKA----------GVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred hhhHHHHHHHHHc----------CCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 6899999999988 99999999999999964 22 234466677777887653
No 56
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.60 E-value=4.6e-15 Score=151.38 Aligned_cols=213 Identities=17% Similarity=0.204 Sum_probs=136.8
Q ss_pred CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCcc---CC-CCcChh----HHHHHHhcCcEEEEEcccCCCCCchhHHh
Q 004766 460 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNIS---VT-PSFSVS----RTILMRHLGAVFCIANIRGGGEYGEEWHK 531 (732)
Q Consensus 460 dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~---~~-~~~~~~----~~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 531 (732)
|| ++|.+.+++| +....++.|+||..++..... .. ....+. ...++. +||+|++.|.||.|+.+-.|..
T Consensus 1 DG-v~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~-~GY~vV~~D~RG~g~S~G~~~~ 77 (272)
T PF02129_consen 1 DG-VRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAE-RGYAVVVQDVRGTGGSEGEFDP 77 (272)
T ss_dssp TS--EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHH-TT-EEEEEE-TTSTTS-S-B-T
T ss_pred CC-CEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHh-CCCEEEEECCcccccCCCcccc
Confidence 79 9999999999 444578999999998854221 00 001110 012445 9999999999999987666543
Q ss_pred cccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCC----
Q 004766 532 GGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG---- 607 (732)
Q Consensus 532 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~---- 607 (732)
. ..+..+|..++|+|+.++.+.+ .|||++|.|++|..+..++.+.|...+|++..++..|+.+......+
T Consensus 78 ~-----~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~ 151 (272)
T PF02129_consen 78 M-----SPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRL 151 (272)
T ss_dssp T-----SHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBC
T ss_pred C-----ChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCcccc
Confidence 2 5678899999999999998876 79999999999999999999888899999999999998762110111
Q ss_pred ---Cccc------cccCC-C-CCHHH------------------------H----------HHHHhcCcccCCCCCCCCC
Q 004766 608 ---HAWV------SDFGC-S-EEEEE------------------------F----------YWLIKYSPLHNVRRPWEQN 642 (732)
Q Consensus 608 ---~~~~------~~~g~-p-~~~~~------------------------~----------~~~~~~sp~~~~~~~~~~~ 642 (732)
..|. ..... + ...+. + +++.+.++..++.
T Consensus 152 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~------ 225 (272)
T PF02129_consen 152 GFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLD------ 225 (272)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHG------
T ss_pred cchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHh------
Confidence 1220 00000 0 11000 0 1112222222233
Q ss_pred CCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCC-CCEEEEEeCCCCCC
Q 004766 643 PDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT-NPIIGRIERKAGHG 703 (732)
Q Consensus 643 ~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~gH~ 703 (732)
++..|+|+++|-.|.... ..+.+.+++|++. + ++..|++-| .+|+
T Consensus 226 ----~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~----------~~~~~~Liigp-w~H~ 271 (272)
T PF02129_consen 226 ----KIDVPVLIVGGWYDTLFL-RGALRAYEALRAP----------GSKPQRLIIGP-WTHG 271 (272)
T ss_dssp ----G--SEEEEEEETTCSSTS-HHHHHHHHHHCTT----------STC-EEEEEES-ESTT
T ss_pred ----hCCCCEEEecccCCcccc-hHHHHHHHHhhcC----------CCCCCEEEEeC-CCCC
Confidence 388999999999997777 8999999999876 5 567777754 3564
No 57
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.60 E-value=1.1e-12 Score=138.92 Aligned_cols=287 Identities=16% Similarity=0.121 Sum_probs=173.5
Q ss_pred eEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-------
Q 004766 105 SVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW------- 177 (732)
Q Consensus 105 ~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~------- 177 (732)
..+|+.+...+..+.|.+... .+..+.|||||++|||+.+ .+||++++.++.....+..+
T Consensus 23 ~~y~i~d~~~~~~~~l~~~~~-------~~~~~~~sP~g~~~~~v~~------~nly~~~~~~~~~~~lT~dg~~~i~nG 89 (353)
T PF00930_consen 23 GDYYIYDIETGEITPLTPPPP-------KLQDAKWSPDGKYIAFVRD------NNLYLRDLATGQETQLTTDGEPGIYNG 89 (353)
T ss_dssp EEEEEEETTTTEEEESS-EET-------TBSEEEE-SSSTEEEEEET------TEEEEESSTTSEEEESES--TTTEEES
T ss_pred eeEEEEecCCCceEECcCCcc-------ccccceeecCCCeeEEEec------CceEEEECCCCCeEEeccccceeEEcC
Confidence 345555554444444444311 1348899999999999963 37999999887654333222
Q ss_pred -----------eeeeeEEEEeCCcEEEEEEecCCCCC----CCCCCCCc----c---------cCCcccEEEEEECCCCC
Q 004766 178 -----------FKFSSIAWTHDSKGFFYSRYPAPKEG----KDMDAGTE----T---------DSNLYHEFYYHFLGTKQ 229 (732)
Q Consensus 178 -----------~~~~~~~WspDg~~l~y~~~~~~~~~----~~~~~~~~----~---------~~~~~~~v~~~~lgt~~ 229 (732)
.....+.|||||++|+|.+.++.... ..+..... . +..-..+++++++.++.
T Consensus 90 ~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~ 169 (353)
T PF00930_consen 90 VPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGK 169 (353)
T ss_dssp B--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTC
T ss_pred ccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCc
Confidence 01257889999999999998765321 00111100 0 01112357778887665
Q ss_pred CCCeEEEe-cCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccc--eE
Q 004766 230 SEDILCWK-DPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA--QY 306 (732)
Q Consensus 230 ~~~~~v~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~ 306 (732)
...+.+-. ......++..+.|++|++.+++...++......+.++|.+++.+.. ..+....++-. ..
T Consensus 170 ~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~----------~~~e~~~~Wv~~~~~ 239 (353)
T PF00930_consen 170 TTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRV----------VLEETSDGWVDVYDP 239 (353)
T ss_dssp CCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEE----------EEEEESSSSSSSSSE
T ss_pred EEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeE----------EEEecCCcceeeecc
Confidence 43221110 1123567789999999997766665555557889999987754220 01111112211 11
Q ss_pred EEEE-ecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCce-eEEEEecC-CEEEEEEecC--CeeEEEEEeCC
Q 004766 307 EVIA-NDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVL-ESATAVNL-NQMIVSYLSD--VKYVLQIRDLK 381 (732)
Q Consensus 307 ~~~s-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l-~~~~~~~~-~~l~~~~~~~--g~~~l~~~d~~ 381 (732)
..+. +++..+++++.+++ ..+|+.++.+++. .+.|+... ..+ .-+.+..+ +.|||.+..+ ...+||+++++
T Consensus 240 ~~~~~~~~~~~l~~s~~~G-~~hly~~~~~~~~-~~~lT~G~--~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~ 315 (353)
T PF00930_consen 240 PHFLGPDGNEFLWISERDG-YRHLYLYDLDGGK-PRQLTSGD--WEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLD 315 (353)
T ss_dssp EEE-TTTSSEEEEEEETTS-SEEEEEEETTSSE-EEESS-SS--S-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETT
T ss_pred cccccCCCCEEEEEEEcCC-CcEEEEEcccccc-eeccccCc--eeecccceEcCCCCEEEEEecCCCCCceEEEEEEeC
Confidence 2344 78889988888655 7799999998876 55565544 444 33455543 6788888764 35799999998
Q ss_pred -CCceeeecccccceeeEeecccCCcEEEEEEecCCCCc
Q 004766 382 -NGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPG 419 (732)
Q Consensus 382 -~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~ 419 (732)
+|+. +.|+-..+....+++|++++.++..++++.+|+
T Consensus 316 ~~~~~-~~LT~~~~~~~~~~~Spdg~y~v~~~s~~~~P~ 353 (353)
T PF00930_consen 316 SGGEP-KCLTCEDGDHYSASFSPDGKYYVDTYSGPDTPP 353 (353)
T ss_dssp ETTEE-EESSTTSSTTEEEEE-TTSSEEEEEEESSSSCE
T ss_pred CCCCe-EeccCCCCCceEEEECCCCCEEEEEEcCCCCCC
Confidence 5554 788855443346788999999999999999885
No 58
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.59 E-value=1.9e-14 Score=130.72 Aligned_cols=234 Identities=13% Similarity=0.085 Sum_probs=164.1
Q ss_pred CCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCc
Q 004766 447 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 526 (732)
Q Consensus 447 ~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g 526 (732)
.++.-+++...++|. +++.++++.-+ ...|+++|.|+.-|.. ..+.+...-+..+.+..|++++|||-|..-
T Consensus 50 ~n~pye~i~l~T~D~-vtL~a~~~~~E-----~S~pTlLyfh~NAGNm--Ghr~~i~~~fy~~l~mnv~ivsYRGYG~S~ 121 (300)
T KOG4391|consen 50 FNMPYERIELRTRDK-VTLDAYLMLSE-----SSRPTLLYFHANAGNM--GHRLPIARVFYVNLKMNVLIVSYRGYGKSE 121 (300)
T ss_pred cCCCceEEEEEcCcc-eeEeeeeeccc-----CCCceEEEEccCCCcc--cchhhHHHHHHHHcCceEEEEEeeccccCC
Confidence 356778899999999 99999999732 4789999999976642 234444445566699999999999966432
Q ss_pred hhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCC
Q 004766 527 EEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTI 606 (732)
Q Consensus 527 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~ 606 (732)
..-.+. .-.-|..++++||..+...|..||.++|.|.||..+..+++.+-++..|+|...-|+.+..+.-...
T Consensus 122 GspsE~-------GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v 194 (300)
T KOG4391|consen 122 GSPSEE-------GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLV 194 (300)
T ss_pred CCcccc-------ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhee
Confidence 222222 2246899999999999999999999999999999999999998999999999888776643321000
Q ss_pred CCccccccCCCCCHHHHHHHH-hcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCC
Q 004766 607 GHAWVSDFGCSEEEEEFYWLI-KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLEN 685 (732)
Q Consensus 607 ~~~~~~~~g~p~~~~~~~~~~-~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 685 (732)
.-|+..-.+ .+ ..+ .++-+..+.. ...|.|++.|..|..|||-+-++++..--
T Consensus 195 -----~p~~~k~i~-~l-c~kn~~~S~~ki~~----------~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~--------- 248 (300)
T KOG4391|consen 195 -----FPFPMKYIP-LL-CYKNKWLSYRKIGQ----------CRMPFLFISGLKDELVPPVMMRQLYELCP--------- 248 (300)
T ss_pred -----ccchhhHHH-HH-HHHhhhcchhhhcc----------ccCceEEeecCccccCCcHHHHHHHHhCc---------
Confidence 001100000 00 011 2334444443 77899999999999999999888876532
Q ss_pred CCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 686 SPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 686 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
.....+.+||++.|.-..-. --.++.+-+||.+...
T Consensus 249 ---S~~Krl~eFP~gtHNDT~i~---dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 249 ---SRTKRLAEFPDGTHNDTWIC---DGYFQAIEDFLAEVVK 284 (300)
T ss_pred ---hhhhhheeCCCCccCceEEe---ccHHHHHHHHHHHhcc
Confidence 22358899999999754321 2344556678877543
No 59
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.59 E-value=4.5e-13 Score=146.48 Aligned_cols=246 Identities=15% Similarity=0.126 Sum_probs=161.9
Q ss_pred CCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccE
Q 004766 140 SEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHE 219 (732)
Q Consensus 140 SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (732)
.+.+.+++|+...++....+|+++|..++........+.....++|||||+.|+|+.... ...+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~----------------~~~~ 215 (417)
T TIGR02800 152 GAFSTRIAYVSKSGKSRRYELQVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFES----------------GKPE 215 (417)
T ss_pred CCcCCEEEEEEEeCCCCcceEEEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCC----------------CCcE
Confidence 445788999987654556799999997665433222222246789999999999986432 2357
Q ss_pred EEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEee
Q 004766 220 FYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI 299 (732)
Q Consensus 220 v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~ 299 (732)
|+++++.++... .+... ......+.|||||+.|++...... ..+||++++.++. .+.++
T Consensus 216 i~v~d~~~g~~~--~~~~~---~~~~~~~~~spDg~~l~~~~~~~~--~~~i~~~d~~~~~--------------~~~l~ 274 (417)
T TIGR02800 216 IYVQDLATGQRE--KVASF---PGMNGAPAFSPDGSKLAVSLSKDG--NPDIYVMDLDGKQ--------------LTRLT 274 (417)
T ss_pred EEEEECCCCCEE--EeecC---CCCccceEECCCCCEEEEEECCCC--CccEEEEECCCCC--------------EEECC
Confidence 999999876432 22221 122346899999999998765433 4679999988743 23333
Q ss_pred ecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEE
Q 004766 300 DGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQI 377 (732)
Q Consensus 300 ~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~ 377 (732)
..... ....|+|||++|+|.+++.+ ..+||.+++.++. .+.+.... .....+.|+++ +.+++.....+..+|++
T Consensus 275 ~~~~~~~~~~~s~dg~~l~~~s~~~g-~~~iy~~d~~~~~-~~~l~~~~--~~~~~~~~spdg~~i~~~~~~~~~~~i~~ 350 (417)
T TIGR02800 275 NGPGIDTEPSWSPDGKSIAFTSDRGG-SPQIYMMDADGGE-VRRLTFRG--GYNASPSWSPDGDLIAFVHREGGGFNIAV 350 (417)
T ss_pred CCCCCCCCEEECCCCCEEEEEECCCC-CceEEEEECCCCC-EEEeecCC--CCccCeEECCCCCEEEEEEccCCceEEEE
Confidence 22111 12358999999999888754 4589999998776 55555443 33456677765 45666666666679999
Q ss_pred EeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 378 RDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 378 ~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+|++++.. +.++.. .....+.+++|++.+++...... ...++..+...+
T Consensus 351 ~d~~~~~~-~~l~~~-~~~~~p~~spdg~~l~~~~~~~~-~~~l~~~~~~g~ 399 (417)
T TIGR02800 351 MDLDGGGE-RVLTDT-GLDESPSFAPNGRMILYATTRGG-RGVLGLVSTDGR 399 (417)
T ss_pred EeCCCCCe-EEccCC-CCCCCceECCCCCEEEEEEeCCC-cEEEEEEECCCc
Confidence 99986554 455432 22334567899998887776543 356777775443
No 60
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.58 E-value=3e-14 Score=159.87 Aligned_cols=135 Identities=16% Similarity=0.156 Sum_probs=105.8
Q ss_pred EccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccC-CCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccc
Q 004766 457 PSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 535 (732)
Q Consensus 457 ~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~ 535 (732)
++.|| ++|.+.++.|++ .++.|+||+.||...... ...+......++.++||+|+++|+||.|+.+..+...
T Consensus 2 ~~~DG-~~L~~~~~~P~~---~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~--- 74 (550)
T TIGR00976 2 PMRDG-TRLAIDVYRPAG---GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL--- 74 (550)
T ss_pred cCCCC-CEEEEEEEecCC---CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec---
Confidence 56899 999999999975 357999999998644321 0112212234455599999999999998776543221
Q ss_pred cCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccc
Q 004766 536 AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY 601 (732)
Q Consensus 536 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~ 601 (732)
.....+|+.++++|+.++.+.+ .||+++|+|+||++++.++.++|+.++|+|+.+++.|+.+.
T Consensus 75 --~~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~~ 137 (550)
T TIGR00976 75 --GSDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYRD 137 (550)
T ss_pred --CcccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhHh
Confidence 1457799999999999998877 79999999999999999999999999999999999987653
No 61
>PLN02511 hydrolase
Probab=99.57 E-value=5.7e-14 Score=150.32 Aligned_cols=139 Identities=17% Similarity=0.149 Sum_probs=93.1
Q ss_pred EEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHH
Q 004766 451 VHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWH 530 (732)
Q Consensus 451 ~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~ 530 (732)
.++..+...|| ..+...++.+.........|+||++||..+.+.. .|.......+.++||.|+++|+||.|+....
T Consensus 71 ~~re~l~~~DG-~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~-~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~-- 146 (388)
T PLN02511 71 YRRECLRTPDG-GAVALDWVSGDDRALPADAPVLILLPGLTGGSDD-SYVRHMLLRARSKGWRVVVFNSRGCADSPVT-- 146 (388)
T ss_pred eeEEEEECCCC-CEEEEEecCcccccCCCCCCEEEEECCCCCCCCC-HHHHHHHHHHHHCCCEEEEEecCCCCCCCCC--
Confidence 34556677899 8887765543211122457999999998776543 2332232333349999999999998764211
Q ss_pred hcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCe--eeEEEEcCCccc
Q 004766 531 KGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL--FGCALAHVGVMD 597 (732)
Q Consensus 531 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~--f~a~v~~~p~~d 597 (732)
..........+|+.+++++|..+ + ...++.++|+|+||.+++.++.++|+. +.++++.++..|
T Consensus 147 --~~~~~~~~~~~Dl~~~i~~l~~~-~-~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 147 --TPQFYSASFTGDLRQVVDHVAGR-Y-PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred --CcCEEcCCchHHHHHHHHHHHHH-C-CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 00111124568999999999875 2 235899999999999999999999986 666665555444
No 62
>PRK10985 putative hydrolase; Provisional
Probab=99.55 E-value=1.2e-13 Score=144.73 Aligned_cols=240 Identities=12% Similarity=0.051 Sum_probs=140.1
Q ss_pred EEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhc
Q 004766 453 QVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKG 532 (732)
Q Consensus 453 ~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~ 532 (732)
+..++..|| ..+...+..... .....|+||++||..+.... .|...+...|.++||.|+++|+||.|+.......
T Consensus 33 ~~~~~~~dg-~~~~l~w~~~~~--~~~~~p~vll~HG~~g~~~~-~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~- 107 (324)
T PRK10985 33 WQRLELPDG-DFVDLAWSEDPA--QARHKPRLVLFHGLEGSFNS-PYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR- 107 (324)
T ss_pred eeEEECCCC-CEEEEecCCCCc--cCCCCCEEEEeCCCCCCCcC-HHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc-
Confidence 344667899 777655432221 23457999999998765433 2333344556669999999999998754321111
Q ss_pred ccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCe--eeEEEEcCCcccccccc--------
Q 004766 533 GALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL--FGCALAHVGVMDMLRYH-------- 602 (732)
Q Consensus 533 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~--f~a~v~~~p~~d~~~~~-------- 602 (732)
.......+|+.++++++.++. ...++.++|+|+||.+++.++.++++. +.++|+.++..++....
T Consensus 108 ---~~~~~~~~D~~~~i~~l~~~~--~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~ 182 (324)
T PRK10985 108 ---IYHSGETEDARFFLRWLQREF--GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFS 182 (324)
T ss_pred ---eECCCchHHHHHHHHHHHHhC--CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHH
Confidence 011234689999999998752 235799999999999888888776543 67766666654432100
Q ss_pred ---c--CC--CCC---ccccccCC--CCCH------------------------HHHHHHHhcCcccCCCCCCCCCCCCC
Q 004766 603 ---K--FT--IGH---AWVSDFGC--SEEE------------------------EEFYWLIKYSPLHNVRRPWEQNPDKP 646 (732)
Q Consensus 603 ---~--~~--~~~---~~~~~~g~--p~~~------------------------~~~~~~~~~sp~~~~~~~~~~~~~~~ 646 (732)
. +. ... .-...|.. +.+. ...+++...++...+.+
T Consensus 183 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~--------- 253 (324)
T PRK10985 183 RVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQ--------- 253 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhC---------
Confidence 0 00 000 00000000 1111 11223333444333333
Q ss_pred CCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc-----hHHHHHHHHHHHHH
Q 004766 647 FQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP-----TQKMIDEAADRYGF 721 (732)
Q Consensus 647 ~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-----~~~~~~~~~~~~~f 721 (732)
+..|+|+++|++|+.+++.....+. +. ...+.+.+.+++||...-. ...+.+ ..+.+|
T Consensus 254 -i~~P~lii~g~~D~~~~~~~~~~~~----~~----------~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~--~~~~~~ 316 (324)
T PRK10985 254 -IRKPTLIIHAKDDPFMTHEVIPKPE----SL----------PPNVEYQLTEHGGHVGFVGGTLLKPQMWLE--QRIPDW 316 (324)
T ss_pred -CCCCEEEEecCCCCCCChhhChHHH----Hh----------CCCeEEEECCCCCceeeCCCCCCCCCccHH--HHHHHH
Confidence 7899999999999999876554442 22 2346888899999964321 111222 256788
Q ss_pred HHHHhCC
Q 004766 722 MAKMLGA 728 (732)
Q Consensus 722 l~~~l~~ 728 (732)
+...++.
T Consensus 317 ~~~~~~~ 323 (324)
T PRK10985 317 LTTYLEA 323 (324)
T ss_pred HHHhhcC
Confidence 8766643
No 63
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.55 E-value=4.2e-13 Score=142.84 Aligned_cols=245 Identities=18% Similarity=0.132 Sum_probs=159.3
Q ss_pred CCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-ccccee
Q 004766 101 LQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSWFK 179 (732)
Q Consensus 101 ~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~~~ 179 (732)
+...+.++..+..+.....+.+...+ +..+.|||||+.++|..-..+.. ..++++|+++|+.... ...+ .
T Consensus 169 ~~~~~~l~~~D~dg~~~~~l~~~~~~-------~~~p~ws~~~~~~~y~~f~~~~~-~~i~~~~l~~g~~~~i~~~~g-~ 239 (425)
T COG0823 169 GPLPYELALGDYDGYNQQKLTDSGSL-------ILTPAWSPDGKKLAYVSFELGGC-PRIYYLDLNTGKRPVILNFNG-N 239 (425)
T ss_pred CCCCceEEEEccCCcceeEecccCcc-------eeccccCcCCCceEEEEEecCCC-ceEEEEeccCCccceeeccCC-c
Confidence 33345566665432333454444333 45789999999999997655432 6899999999873221 2222 2
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
...++|||||++|+|+.... ...+||+.++.+..... +. ...+....+.|||||++|+|
T Consensus 240 ~~~P~fspDG~~l~f~~~rd----------------g~~~iy~~dl~~~~~~~--Lt---~~~gi~~~Ps~spdG~~ivf 298 (425)
T COG0823 240 NGAPAFSPDGSKLAFSSSRD----------------GSPDIYLMDLDGKNLPR--LT---NGFGINTSPSWSPDGSKIVF 298 (425)
T ss_pred cCCccCCCCCCEEEEEECCC----------------CCccEEEEcCCCCccee--cc---cCCccccCccCCCCCCEEEE
Confidence 36799999999999997543 45679999998776332 22 22334458999999999999
Q ss_pred EEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC
Q 004766 260 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 338 (732)
Q Consensus 260 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 338 (732)
.+.+.. ..+||+++++++. .+.++.... ...+.|+|||+++.|.+..++ ...++..++.++.
T Consensus 299 ~Sdr~G--~p~I~~~~~~g~~--------------~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g-~~~i~~~~~~~~~ 361 (425)
T COG0823 299 TSDRGG--RPQIYLYDLEGSQ--------------VTRLTFSGGGNSNPVWSPDGDKIVFESSSGG-QWDIDKNDLASGG 361 (425)
T ss_pred EeCCCC--CcceEEECCCCCc--------------eeEeeccCCCCcCccCCCCCCEEEEEeccCC-ceeeEEeccCCCC
Confidence 987776 5689999998743 244444332 235679999999999884333 3678888887665
Q ss_pred CceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCCCCceeeeccccccee
Q 004766 339 DWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSV 396 (732)
Q Consensus 339 ~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v 396 (732)
.++.+... ...+...+.++ ..+++.....+.+.+...+.. |+..+.+....+.+
T Consensus 362 ~~~~lt~~---~~~e~ps~~~ng~~i~~~s~~~~~~~l~~~s~~-g~~~~~~~~~~~~~ 416 (425)
T COG0823 362 KIRILTST---YLNESPSWAPNGRMIMFSSGQGGGSVLSLVSLD-GRVSRPLPLADGDV 416 (425)
T ss_pred cEEEcccc---ccCCCCCcCCCCceEEEeccCCCCceEEEeecc-ceeEEEEeccCcce
Confidence 44444322 23344556654 445566555566778877765 66544444333444
No 64
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.54 E-value=2.1e-13 Score=142.95 Aligned_cols=235 Identities=11% Similarity=0.041 Sum_probs=138.6
Q ss_pred EEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCC-----------------------CcChhHHHHHHhcCc
Q 004766 456 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP-----------------------SFSVSRTILMRHLGA 512 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~-----------------------~~~~~~~~~l~~~G~ 512 (732)
+.+.|| .+|......|+ .+..+|+++||..+..... .|...+...|.++||
T Consensus 2 ~~~~~g-~~l~~~~~~~~-----~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~ 75 (332)
T TIGR01607 2 FRNKDG-LLLKTYSWIVK-----NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGY 75 (332)
T ss_pred ccCCCC-CeEEEeeeecc-----CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCC
Confidence 567799 99988877764 2457999999965443210 123345667777999
Q ss_pred EEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHc------------------CCCCCCcEEEEecChhHHH
Q 004766 513 VFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA------------------GYTQSRKLCIEGGSNGGLL 574 (732)
Q Consensus 513 ~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~------------------~~~d~~~i~i~G~S~GG~l 574 (732)
.|+++|.||.|.....-...+....-..-.+|+...++.+.+. .+-....+.++||||||++
T Consensus 76 ~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i 155 (332)
T TIGR01607 76 SVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNI 155 (332)
T ss_pred cEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHH
Confidence 9999999998864321000110001111234455555544331 1111246999999999999
Q ss_pred HHHHHhhCCC--------eeeEEEEcCCccccccc----------------------c-cCCCCC-ccccccCCCCCHHH
Q 004766 575 VGACINQRPD--------LFGCALAHVGVMDMLRY----------------------H-KFTIGH-AWVSDFGCSEEEEE 622 (732)
Q Consensus 575 ~~~~~~~~p~--------~f~a~v~~~p~~d~~~~----------------------~-~~~~~~-~~~~~~g~p~~~~~ 622 (732)
+..++.++++ .++++|+.+|.+.+... . .+..+. .|.. .++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~-----~~~~~ 230 (332)
T TIGR01607 156 ALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYE-----KSPYV 230 (332)
T ss_pred HHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccc-----cChhh
Confidence 9988765432 57888877776533110 0 000000 0100 11111
Q ss_pred HHHHHhcCccc----------------------CCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhc
Q 004766 623 FYWLIKYSPLH----------------------NVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLC 680 (732)
Q Consensus 623 ~~~~~~~sp~~----------------------~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~ 680 (732)
.+. ...+|+. .+... ....|+|++||.+|..|++..+.++++++.
T Consensus 231 ~~~-~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i--------~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~---- 297 (332)
T TIGR01607 231 NDI-IKFDKFRYDGGITFNLASELIKATDTLDCDIDYI--------PKDIPILFIHSKGDCVCSYEGTVSFYNKLS---- 297 (332)
T ss_pred hhH-HhcCccccCCcccHHHHHHHHHHHHHHHhhHhhC--------CCCCCEEEEEeCCCCccCHHHHHHHHHhcc----
Confidence 110 1112211 11110 125799999999999999999888877654
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 681 TSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
...+.++++++++|....... +.+..+.+.+||.
T Consensus 298 --------~~~~~l~~~~g~~H~i~~E~~-~~~v~~~i~~wL~ 331 (332)
T TIGR01607 298 --------ISNKELHTLEDMDHVITIEPG-NEEVLKKIIEWIS 331 (332)
T ss_pred --------CCCcEEEEECCCCCCCccCCC-HHHHHHHHHHHhh
Confidence 234678899999999876543 2467778888874
No 65
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.54 E-value=9.4e-14 Score=140.73 Aligned_cols=206 Identities=13% Similarity=0.085 Sum_probs=125.6
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
...|+||++||..+... .|. .....|. +||.|+++|+||.|...... ....+++|....+..+++. .
T Consensus 11 ~~~~~iv~lhG~~~~~~--~~~-~~~~~l~-~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~i~~--~ 77 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGS--YWA-PQLDVLT-QRFHVVTYDHRGTGRSPGEL-------PPGYSIAHMADDVLQLLDA--L 77 (257)
T ss_pred CCCCEEEEEcCCCcchh--HHH-HHHHHHH-hccEEEEEcCCCCCCCCCCC-------cccCCHHHHHHHHHHHHHH--h
Confidence 35689999999876542 232 3455677 78999999999988653221 1112455555555544443 3
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccc-----------cc-CC------------CCCcccccc
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY-----------HK-FT------------IGHAWVSDF 614 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~-----------~~-~~------------~~~~~~~~~ 614 (732)
+.+++.++|+|+||+++..++.++|+.++++|+..++...... +. .. ....|....
T Consensus 78 ~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (257)
T TIGR03611 78 NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISEN 157 (257)
T ss_pred CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhcc
Confidence 4568999999999999999999999999998877764432100 00 00 000111100
Q ss_pred CCC------------CC-HHHH---HHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHh
Q 004766 615 GCS------------EE-EEEF---YWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYV 678 (732)
Q Consensus 615 g~p------------~~-~~~~---~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~ 678 (732)
... .. ...+ ..+..++....++ .+..|+|+++|++|..||+.++.++++.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~- 226 (257)
T TIGR03611 158 AARLAADEAHALAHFPGKANVLRRINALEAFDVSARLD----------RIQHPVLLIANRDDMLVPYTQSLRLAAALPN- 226 (257)
T ss_pred chhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhc----------ccCccEEEEecCcCcccCHHHHHHHHHhcCC-
Confidence 000 00 0001 1111122222222 3789999999999999999998888776542
Q ss_pred hcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 679 LCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
..+..++++||....... .+....+.+||.
T Consensus 227 -------------~~~~~~~~~gH~~~~~~~--~~~~~~i~~fl~ 256 (257)
T TIGR03611 227 -------------AQLKLLPYGGHASNVTDP--ETFNRALLDFLK 256 (257)
T ss_pred -------------ceEEEECCCCCCccccCH--HHHHHHHHHHhc
Confidence 367778999999765433 244456677763
No 66
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.52 E-value=3.9e-13 Score=143.03 Aligned_cols=202 Identities=17% Similarity=0.127 Sum_probs=136.9
Q ss_pred eCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCC
Q 004766 89 RGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQ 168 (732)
Q Consensus 89 ~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g 168 (732)
++..+.|.....++. +.+|+.....+..+++++.+... ..++|||||++|||+..+.|+ .+||++|+.++
T Consensus 203 ~~~~~~y~~f~~~~~-~~i~~~~l~~g~~~~i~~~~g~~-------~~P~fspDG~~l~f~~~rdg~--~~iy~~dl~~~ 272 (425)
T COG0823 203 DGKKLAYVSFELGGC-PRIYYLDLNTGKRPVILNFNGNN-------GAPAFSPDGSKLAFSSSRDGS--PDIYLMDLDGK 272 (425)
T ss_pred CCCceEEEEEecCCC-ceEEEEeccCCccceeeccCCcc-------CCccCCCCCCEEEEEECCCCC--ccEEEEcCCCC
Confidence 455555554333331 44677666666666777755443 378999999999999998876 79999999988
Q ss_pred ceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEe
Q 004766 169 IVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSG 248 (732)
Q Consensus 169 ~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~ 248 (732)
.....+.......+++|||||+.|+|+++.. +++ +||++++.++..+.+ .+... ....+
T Consensus 273 ~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~---------------G~p-~I~~~~~~g~~~~ri-T~~~~----~~~~p 331 (425)
T COG0823 273 NLPRLTNGFGINTSPSWSPDGSKIVFTSDRG---------------GRP-QIYLYDLEGSQVTRL-TFSGG----GNSNP 331 (425)
T ss_pred cceecccCCccccCccCCCCCCEEEEEeCCC---------------CCc-ceEEECCCCCceeEe-eccCC----CCcCc
Confidence 7433222222236899999999999997543 333 799999987765322 22221 11278
Q ss_pred EEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCce
Q 004766 249 HVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYK 328 (732)
Q Consensus 249 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~ 328 (732)
.|||||++|+|...... ...+...++.++. .++.++.......+.|+++|+.+.|.++.. ....
T Consensus 332 ~~SpdG~~i~~~~~~~g--~~~i~~~~~~~~~-------------~~~~lt~~~~~e~ps~~~ng~~i~~~s~~~-~~~~ 395 (425)
T COG0823 332 VWSPDGDKIVFESSSGG--QWDIDKNDLASGG-------------KIRILTSTYLNESPSWAPNGRMIMFSSGQG-GGSV 395 (425)
T ss_pred cCCCCCCEEEEEeccCC--ceeeEEeccCCCC-------------cEEEccccccCCCCCcCCCCceEEEeccCC-CCce
Confidence 99999999999984422 3667777776642 155566555555567899999999988765 3456
Q ss_pred EEEEeCCCC
Q 004766 329 IIRVDLKEP 337 (732)
Q Consensus 329 l~~~d~~~~ 337 (732)
|+.+++.+.
T Consensus 396 l~~~s~~g~ 404 (425)
T COG0823 396 LSLVSLDGR 404 (425)
T ss_pred EEEeeccce
Confidence 777766554
No 67
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.52 E-value=2.5e-13 Score=140.08 Aligned_cols=236 Identities=14% Similarity=0.128 Sum_probs=137.9
Q ss_pred CceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCch
Q 004766 448 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE 527 (732)
Q Consensus 448 ~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~ 527 (732)
.+..+++.++- +| .+|++++..|+. +++.|+||++=|.-+... .+...+...+..+|++++.+|.+|.|+..
T Consensus 162 ~~~i~~v~iP~-eg-~~I~g~LhlP~~---~~p~P~VIv~gGlDs~qe--D~~~l~~~~l~~rGiA~LtvDmPG~G~s~- 233 (411)
T PF06500_consen 162 DYPIEEVEIPF-EG-KTIPGYLHLPSG---EKPYPTVIVCGGLDSLQE--DLYRLFRDYLAPRGIAMLTVDMPGQGESP- 233 (411)
T ss_dssp SSEEEEEEEEE-TT-CEEEEEEEESSS---SS-EEEEEEE--TTS-GG--GGHHHHHCCCHHCT-EEEEE--TTSGGGT-
T ss_pred CCCcEEEEEee-CC-cEEEEEEEcCCC---CCCCCEEEEeCCcchhHH--HHHHHHHHHHHhCCCEEEEEccCCCcccc-
Confidence 45678888886 46 799999999984 478998888755433322 21112223355599999999999988632
Q ss_pred hHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc-ccccccc--C
Q 004766 528 EWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM-DMLRYHK--F 604 (732)
Q Consensus 528 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~-d~~~~~~--~ 604 (732)
.|- ..+....=..++++||.+.+++|.+||+++|.|+||+++.+++..++++++|+|+..|++ ++++-.. .
T Consensus 234 ~~~------l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~ 307 (411)
T PF06500_consen 234 KWP------LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQ 307 (411)
T ss_dssp TT-------S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHT
T ss_pred cCC------CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHh
Confidence 221 111122235688999999999999999999999999999999987788999998887754 4432110 0
Q ss_pred CCCCc----cccccCCC--CCHHHHHHHHhcCcccC--C-CCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHH
Q 004766 605 TIGHA----WVSDFGCS--EEEEEFYWLIKYSPLHN--V-RRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATM 675 (732)
Q Consensus 605 ~~~~~----~~~~~g~p--~~~~~~~~~~~~sp~~~--~-~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l 675 (732)
..+.- +...+|.. ++......+..+|-... + .+ +..+|+|.+.+.+|+.+|.+...-++..
T Consensus 308 ~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~r---------r~~~plL~i~~~~D~v~P~eD~~lia~~- 377 (411)
T PF06500_consen 308 RVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGR---------RCPTPLLAINGEDDPVSPIEDSRLIAES- 377 (411)
T ss_dssp TS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS----------BSS-EEEEEETT-SSS-HHHHHHHHHT-
T ss_pred cCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCC---------CCCcceEEeecCCCCCCCHHHHHHHHhc-
Confidence 01100 11344533 23333344566665432 2 12 4788999999999999998886554432
Q ss_pred HHhhcCCCCCCCCCCCEEEEEeCCCC-CCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 676 QYVLCTSLENSPQTNPIIGRIERKAG-HGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
+.+-+...++... |.. .-+.+..++.||...|
T Consensus 378 -------------s~~gk~~~~~~~~~~~g------y~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 378 -------------STDGKALRIPSKPLHMG------YPQALDEIYKWLEDKL 410 (411)
T ss_dssp -------------BTT-EEEEE-SSSHHHH------HHHHHHHHHHHHHHHH
T ss_pred -------------CCCCceeecCCCccccc------hHHHHHHHHHHHHHhc
Confidence 2222334444333 421 1245567888998876
No 68
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.51 E-value=5.2e-13 Score=128.83 Aligned_cols=232 Identities=13% Similarity=0.135 Sum_probs=154.2
Q ss_pred CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccccc---
Q 004766 460 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALA--- 536 (732)
Q Consensus 460 dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~--- 536 (732)
+| .+.+++++.|.+.. +..|+||++||+.++.....-...+..+.+..||.|+.|| ++...|+..+...
T Consensus 43 ~g-~~r~y~l~vP~g~~--~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPd-----g~~~~wn~~~~~~~~~ 114 (312)
T COG3509 43 NG-LKRSYRLYVPPGLP--SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPD-----GYDRAWNANGCGNWFG 114 (312)
T ss_pred CC-CccceEEEcCCCCC--CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcC-----ccccccCCCcccccCC
Confidence 56 78999999999864 4559999999998775443333356677888999999993 3555554433333
Q ss_pred -----CCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc--cccccccCCCCCc
Q 004766 537 -----KKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM--DMLRYHKFTIGHA 609 (732)
Q Consensus 537 -----~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~--d~~~~~~~~~~~~ 609 (732)
.+..+...+.+.+..|+.+.-+||+||.|.|.|+||.|+.+++..+|++|.|+...++.. +..++-.-.. .
T Consensus 115 p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~~~~a~~~~rp~--~ 192 (312)
T COG3509 115 PADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLALGVACTPPRPV--S 192 (312)
T ss_pred cccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccCCCcccCCCCch--h
Confidence 344567778889999999988999999999999999999999999999999997777654 2212111000 0
Q ss_pred cccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCC------
Q 004766 610 WVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSL------ 683 (732)
Q Consensus 610 ~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~------ 683 (732)
.+..-|. .|+ .+|++-= ..| |-+|..|..|+.....+..+.+-.. +..+
T Consensus 193 ~m~~~G~-~Dp--------~~p~~gG-------------~~~--~g~g~~~~~v~~~~~~~~Waa~ng~-~~~p~~~~~~ 247 (312)
T COG3509 193 VMAFHGT-ADP--------LNPYHGG-------------GVP--IGRGQRDGVVSAADLAARWAAVNGC-QAGPDTAELP 247 (312)
T ss_pred HHHhcCC-CCC--------CCCCCCC-------------Ccc--cccccccccccHHHHHHHHHHhcCC-CCCCcccccC
Confidence 1111222 222 2344331 123 8899999988555555555554332 1111
Q ss_pred --------CCCCCCCCEEEEEeCCCCCCCCCchHH----------HHHHHHHHHHHHHHHh
Q 004766 684 --------ENSPQTNPIIGRIERKAGHGVGLPTQK----------MIDEAADRYGFMAKML 726 (732)
Q Consensus 684 --------~~~~~~~~~~~~~~~~~gH~~~~~~~~----------~~~~~~~~~~fl~~~l 726 (732)
....++.++++..+.+.||.-...... .++....++.|+..+-
T Consensus 248 ~~~~~~~~~~~~~~~~V~~y~i~g~GH~wp~~~~~~~~~~g~~t~~~dat~~iw~Ff~~~~ 308 (312)
T COG3509 248 DVGDGTDYDTCDGNARVELYTIDGGGHTWPGGTQYGPAALGMSTRGFDATERIWRFFRQHR 308 (312)
T ss_pred CCcccceeeccCCCcceEEEEEeCCcccCcCCCCCCcccccccccCcchHHHHHHHHHhcc
Confidence 123457789999999999986532111 2445667888988763
No 69
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.50 E-value=2.3e-12 Score=131.52 Aligned_cols=245 Identities=11% Similarity=-0.036 Sum_probs=140.7
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCC-cChhHHHHHHhcCcEEEEEcccCCCCCchhHH
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPS-FSVSRTILMRHLGAVFCIANIRGGGEYGEEWH 530 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~ 530 (732)
+.+.++. +| ..+.+.++.|.+. +.|.||++|||.+...... ....+...|+++||.|+++|+||.|......
T Consensus 3 ~~~~~~~-~~-~~l~g~~~~p~~~----~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~- 75 (274)
T TIGR03100 3 RALTFSC-EG-ETLVGVLHIPGAS----HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN- 75 (274)
T ss_pred eeEEEEc-CC-cEEEEEEEcCCCC----CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-
Confidence 3466664 57 7899999998642 3467888888765433221 1123345666699999999999988643210
Q ss_pred hcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc-------
Q 004766 531 KGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK------- 603 (732)
Q Consensus 531 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------- 603 (732)
.......+|+.+++++|.++- ...++|.++|+|+||++++.++.. +..++++|+..|++.......
T Consensus 76 -----~~~~~~~~d~~~~~~~l~~~~-~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~ 148 (274)
T TIGR03100 76 -----LGFEGIDADIAAAIDAFREAA-PHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHY 148 (274)
T ss_pred -----CCHHHHHHHHHHHHHHHHhhC-CCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHH
Confidence 111234689999999998651 122579999999999999888765 568999999988754221100
Q ss_pred ----CCCCCcccccc-CCCCCHHHHHHHHh----cCcccCCCCCC---CCC-CCCCCCCCeEEEEeeCCCCCCCchHH--
Q 004766 604 ----FTIGHAWVSDF-GCSEEEEEFYWLIK----YSPLHNVRRPW---EQN-PDKPFQYPSTLLLTADHDDRVVPLHS-- 668 (732)
Q Consensus 604 ----~~~~~~~~~~~-g~p~~~~~~~~~~~----~sp~~~~~~~~---~~~-~~~~~~~~p~Li~~g~~D~~v~~~~~-- 668 (732)
...+..|...+ |..+.....+.+.. ..|........ ..+ ..-..+..|+|+++|..|...+...-
T Consensus 149 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~ 228 (274)
T TIGR03100 149 YLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSV 228 (274)
T ss_pred HHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHh
Confidence 00011121111 11111101111111 21110000000 000 00002678999999999986532210
Q ss_pred ---HHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 669 ---LKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 669 ---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
.++.+.+. ...+.+..+++++|....... +.+..+.+.+||.
T Consensus 229 ~~~~~~~~~l~------------~~~v~~~~~~~~~H~l~~e~~-~~~v~~~i~~wL~ 273 (274)
T TIGR03100 229 LGEPAWRGALE------------DPGIERVEIDGADHTFSDRVW-REWVAARTTEWLR 273 (274)
T ss_pred ccChhhHHHhh------------cCCeEEEecCCCCcccccHHH-HHHHHHHHHHHHh
Confidence 22222232 234789999999997755443 3567778889985
No 70
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.50 E-value=1.1e-11 Score=131.34 Aligned_cols=260 Identities=17% Similarity=0.158 Sum_probs=157.3
Q ss_pred CCCCcEEEEEEeccC----CceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCC
Q 004766 140 SEDAKYLAYALSYSG----SDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSN 215 (732)
Q Consensus 140 SPDG~~la~~~~~~G----~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~ 215 (732)
||||+++++..+... +-...++|+|+++++..+..........+.|||||+.|+|++.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~~------------------ 62 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVRD------------------ 62 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEET------------------
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEec------------------
Confidence 899999999875331 2246899999999986554433223478999999999999963
Q ss_pred cccEEEEEECCCCCCCCeEEEecCC--------------C-CeeEEEeEEecCCcEEEEEEecCCc--------------
Q 004766 216 LYHEFYYHFLGTKQSEDILCWKDPE--------------H-PKYIFSGHVTEDGQYLVMCIEENCD-------------- 266 (732)
Q Consensus 216 ~~~~v~~~~lgt~~~~~~~v~~~~~--------------~-~~~~~~~~~SpDg~~l~~~~~~~~~-------------- 266 (732)
..||+.++.++... .|..... + -.....+.|||||++|++..-+...
T Consensus 63 --~nly~~~~~~~~~~--~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~ 138 (353)
T PF00930_consen 63 --NNLYLRDLATGQET--QLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDS 138 (353)
T ss_dssp --TEEEEESSTTSEEE--ESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTE
T ss_pred --CceEEEECCCCCeE--EeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccc
Confidence 24777766544211 1111110 0 0112367899999999997644321
Q ss_pred -----------------ceEEEEEEeCCCCCCCcccccccCCCCCcEEeee--cccceE---EEEEecCCeEE-EEeCCC
Q 004766 267 -----------------PVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID--GFDAQY---EVIANDDTVFT-FLTNKD 323 (732)
Q Consensus 267 -----------------~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~---~~~s~dg~~l~-~~s~~~ 323 (732)
...++++++++++... ...+.. .....+ ..|++++++|+ ...++.
T Consensus 139 ~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~------------~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~ 206 (353)
T PF00930_consen 139 QYPEVESIRYPKAGDPNPRVSLFVVDLASGKTT------------ELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRD 206 (353)
T ss_dssp SS-EEEEEE--BTTS---EEEEEEEESSSTCCC------------EE---HHHHTSSEEEEEEEEEETTEEEEEEEEETT
T ss_pred cCCcccccccCCCCCcCCceEEEEEECCCCcEE------------EeeeccccCCCccCcccceecCCCcEEEEEEcccC
Confidence 1246677777664310 111110 011111 24899888454 456787
Q ss_pred CCCceEEEEeCCCCCCceEeccCCCCCce---eEEEEe--cCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeE
Q 004766 324 APKYKIIRVDLKEPNDWFEVIPEAERDVL---ESATAV--NLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNA 398 (732)
Q Consensus 324 ~~~~~l~~~d~~~~~~~~~l~~~~~~~~l---~~~~~~--~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~ 398 (732)
.....|+.+|++++. .+.+..+..+..+ ..+.+. +++.+++...++|..+|++++.+++. .+.|+.....|..
T Consensus 207 q~~~~l~~~d~~tg~-~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~V~~ 284 (353)
T PF00930_consen 207 QNRLDLVLCDASTGE-TRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWEVTS 284 (353)
T ss_dssp STEEEEEEEEECTTT-CEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-EEE
T ss_pred CCEEEEEEEECCCCc-eeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCceeecc
Confidence 778899999998876 2333333322222 234444 34677777779999999999998554 4788866666633
Q ss_pred -eecccCCcEEEEEEecCC-CCceEEEEECC-CCCCceEEEE
Q 004766 399 -ISARREDSVVFISFTSFL-IPGIVYQCNLK-TETPEMKIFR 437 (732)
Q Consensus 399 -~~~s~d~~~l~~~~ss~~-~p~~~y~~d~~-~~~~~~~~l~ 437 (732)
+.++.+++.++|..+... .-..+|++++. ++ ..+.|+
T Consensus 285 i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~--~~~~LT 324 (353)
T PF00930_consen 285 ILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGG--EPKCLT 324 (353)
T ss_dssp EEEEECTSSEEEEEESSGGTTSBEEEEEETTETT--EEEESS
T ss_pred cceEcCCCCEEEEEecCCCCCceEEEEEEeCCCC--CeEecc
Confidence 556788888888776522 23588999998 66 355554
No 71
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.50 E-value=4e-13 Score=123.28 Aligned_cols=145 Identities=14% Similarity=0.159 Sum_probs=104.6
Q ss_pred EEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCc
Q 004766 483 CLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRK 562 (732)
Q Consensus 483 ~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~ 562 (732)
+||++||+.+... .|.. +...|+++||.|+.+|+||.+.... ..+..++++++.+. +.++++
T Consensus 1 ~vv~~HG~~~~~~--~~~~-~~~~l~~~G~~v~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~ 62 (145)
T PF12695_consen 1 VVVLLHGWGGSRR--DYQP-LAEALAEQGYAVVAFDYPGHGDSDG--------------ADAVERVLADIRAG-YPDPDR 62 (145)
T ss_dssp EEEEECTTTTTTH--HHHH-HHHHHHHTTEEEEEESCTTSTTSHH--------------SHHHHHHHHHHHHH-HCTCCE
T ss_pred CEEEECCCCCCHH--HHHH-HHHHHHHCCCEEEEEecCCCCccch--------------hHHHHHHHHHHHhh-cCCCCc
Confidence 5899999876532 3433 3445555899999999999876411 12444444444322 228899
Q ss_pred EEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCC
Q 004766 563 LCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQN 642 (732)
Q Consensus 563 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~ 642 (732)
|+++|+|+||.++..++.+. ..++++|+..|+ |. .+.+ .+
T Consensus 63 i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~---------------------~~-~~~~------------~~----- 102 (145)
T PF12695_consen 63 IILIGHSMGGAIAANLAARN-PRVKAVVLLSPY---------------------PD-SEDL------------AK----- 102 (145)
T ss_dssp EEEEEETHHHHHHHHHHHHS-TTESEEEEESES---------------------SG-CHHH------------TT-----
T ss_pred EEEEEEccCcHHHHHHhhhc-cceeEEEEecCc---------------------cc-hhhh------------hc-----
Confidence 99999999999999999987 789999988882 11 0111 11
Q ss_pred CCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCC
Q 004766 643 PDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHG 703 (732)
Q Consensus 643 ~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 703 (732)
...|+|+++|.+|..+++.+..+++++++ .+.+++++++++|+
T Consensus 103 -----~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-------------~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 103 -----IRIPVLFIHGENDPLVPPEQVRRLYEALP-------------GPKELYIIPGAGHF 145 (145)
T ss_dssp -----TTSEEEEEEETT-SSSHHHHHHHHHHHHC-------------SSEEEEEETTS-TT
T ss_pred -----cCCcEEEEEECCCCcCCHHHHHHHHHHcC-------------CCcEEEEeCCCcCc
Confidence 46799999999999999999999888775 35799999999995
No 72
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.50 E-value=1.3e-12 Score=136.14 Aligned_cols=129 Identities=16% Similarity=0.155 Sum_probs=85.5
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhH
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 529 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~ 529 (732)
..+.+.+...+| .++...+. ..+ ++..|.||++||.++... .|.. ....|.++||.|+++|.||.|.....
T Consensus 20 ~~~~~~~~~~~~-~~~~i~y~-~~G---~~~~~~lvliHG~~~~~~--~w~~-~~~~L~~~gy~vi~~Dl~G~G~S~~~- 90 (302)
T PRK00870 20 APHYVDVDDGDG-GPLRMHYV-DEG---PADGPPVLLLHGEPSWSY--LYRK-MIPILAAAGHRVIAPDLIGFGRSDKP- 90 (302)
T ss_pred CceeEeecCCCC-ceEEEEEE-ecC---CCCCCEEEEECCCCCchh--hHHH-HHHHHHhCCCEEEEECCCCCCCCCCC-
Confidence 445566766677 55554322 222 123578999999765432 3443 34556657999999999998754221
Q ss_pred HhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 530 HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 530 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
......+++++.+.+..++++ .+.+++.++|||+||.++..++.++|++++++|+..+
T Consensus 91 -----~~~~~~~~~~~a~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 148 (302)
T PRK00870 91 -----TRREDYTYARHVEWMRSWFEQ--LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANT 148 (302)
T ss_pred -----CCcccCCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCC
Confidence 011123456666655555544 2345899999999999999999999999999987765
No 73
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.49 E-value=1.6e-13 Score=141.55 Aligned_cols=214 Identities=16% Similarity=0.021 Sum_probs=121.2
Q ss_pred CccEEEEEcCCCCccCCCC-cChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 480 SHPCLLYGYGGFNISVTPS-FSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
..|.||++||.......+. +...+..+++ .||.|+++|+||.|......... .......+|+.+.++.+
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~---~~~~~~~~~l~~~l~~l------ 98 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVD-AGYRVILKDSPGFNKSDAVVMDE---QRGLVNARAVKGLMDAL------ 98 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHh-CCCEEEEECCCCCCCCCCCcCcc---cccchhHHHHHHHHHHc------
Confidence 4578999999755432221 1122334445 89999999999987653221000 00001234444444433
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccc------------cc-CCCCC--c---ccccc-CCC--
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY------------HK-FTIGH--A---WVSDF-GCS-- 617 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~------------~~-~~~~~--~---~~~~~-g~p-- 617 (732)
+.+++.++|+|+||.++..++.++|++++++|+..|....... .. +.... . +...+ -++
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSL 178 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCccc
Confidence 4569999999999999999999999999999987764210000 00 00000 0 00000 001
Q ss_pred CC--------------HHHHHH-HHh--cCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhc
Q 004766 618 EE--------------EEEFYW-LIK--YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLC 680 (732)
Q Consensus 618 ~~--------------~~~~~~-~~~--~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~ 680 (732)
.. +..... +.. ..++... +..+....+..|+|+++|.+|..|++..+.++++.+.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~--- 251 (282)
T TIGR03343 179 ITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTW----DVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPD--- 251 (282)
T ss_pred CcHHHHHhHHHHhhcCHHHHHHHHHhccccccccc----hHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCC---
Confidence 00 111101 110 0111100 00001124788999999999999999988888776653
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 681 TSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
+++++++++||.......+ ...+.+.+||.
T Consensus 252 -----------~~~~~i~~agH~~~~e~p~--~~~~~i~~fl~ 281 (282)
T TIGR03343 252 -----------AQLHVFSRCGHWAQWEHAD--AFNRLVIDFLR 281 (282)
T ss_pred -----------CEEEEeCCCCcCCcccCHH--HHHHHHHHHhh
Confidence 4778899999998654432 44556777874
No 74
>COG0400 Predicted esterase [General function prediction only]
Probab=99.49 E-value=1.1e-12 Score=124.80 Aligned_cols=187 Identities=17% Similarity=0.093 Sum_probs=128.9
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCc---hhHHhcccccCC--ccHHHHHHHHHHHH
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG---EEWHKGGALAKK--QNCFDDFISASEYL 552 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g---~~~~~~~~~~~~--~~~~~D~~~~~~~l 552 (732)
+...|+||+.||..+. ...|.+ +..++. -...++.++-+=.=+.+ ..|...+..+.+ ......+.+.++.+
T Consensus 15 ~p~~~~iilLHG~Ggd--e~~~~~-~~~~~~-P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 15 DPAAPLLILLHGLGGD--ELDLVP-LPELIL-PNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCCcEEEEEecCCCC--hhhhhh-hhhhcC-CCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 4567899999997643 334444 334444 45666655443221222 233333332211 12234555666666
Q ss_pred HHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcc
Q 004766 553 ISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPL 632 (732)
Q Consensus 553 ~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~ 632 (732)
+++.-+|++|+.+.|+|+|+.+++.++.++|++|+++|+..|..-... .
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~-----------------~-------------- 139 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP-----------------E-------------- 139 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC-----------------c--------------
Confidence 777678899999999999999999999999999999998888542100 0
Q ss_pred cCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHH
Q 004766 633 HNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMI 712 (732)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 712 (732)
.... ...+|+|++||..|++||..++.++.+.|++. |..++.+.++ .||....
T Consensus 140 -~~~~---------~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~----------g~~v~~~~~~-~GH~i~~------ 192 (207)
T COG0400 140 -LLPD---------LAGTPILLSHGTEDPVVPLALAEALAEYLTAS----------GADVEVRWHE-GGHEIPP------ 192 (207)
T ss_pred -cccc---------cCCCeEEEeccCcCCccCHHHHHHHHHHHHHc----------CCCEEEEEec-CCCcCCH------
Confidence 0111 14679999999999999999999999999988 9999999998 9998854
Q ss_pred HHHHHHHHHHHHHh
Q 004766 713 DEAADRYGFMAKML 726 (732)
Q Consensus 713 ~~~~~~~~fl~~~l 726 (732)
++.+.+..|+...+
T Consensus 193 e~~~~~~~wl~~~~ 206 (207)
T COG0400 193 EELEAARSWLANTL 206 (207)
T ss_pred HHHHHHHHHHHhcc
Confidence 33445666877654
No 75
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.48 E-value=2.2e-14 Score=144.87 Aligned_cols=143 Identities=17% Similarity=0.148 Sum_probs=90.8
Q ss_pred CCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccC----CCC--------c---ChhHHHHHHhc
Q 004766 446 RSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV----TPS--------F---SVSRTILMRHL 510 (732)
Q Consensus 446 ~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~----~~~--------~---~~~~~~~l~~~ 510 (732)
.+.|..|++.|.+.++ ..+|++++.|++. .++.|+||.+||..+... .+. + ...+...|+++
T Consensus 83 rdGY~~EKv~f~~~p~-~~vpaylLvPd~~--~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~ 159 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPG-SRVPAYLLVPDGA--KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR 159 (390)
T ss_dssp ETTEEEEEEEE--STT-B-EEEEEEEETT----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTT
T ss_pred cCCeEEEEEEEEccCC-eeEEEEEEecCCC--CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhC
Confidence 3568899999988899 9999999999986 589999999998643210 000 1 11234556779
Q ss_pred CcEEEEEcccCCCCCchhH-----------------HhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHH
Q 004766 511 GAVFCIANIRGGGEYGEEW-----------------HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGL 573 (732)
Q Consensus 511 G~~v~~~~~rG~g~~g~~~-----------------~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~ 573 (732)
||+|+++|.+|-||.|..= ...|..-.+... -|.+.+++||.++..+|++|||++|+|+||+
T Consensus 160 GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~-~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~ 238 (390)
T PF12715_consen 160 GYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMA-WDDMRALDFLASLPEVDPDRIGCMGFSMGGY 238 (390)
T ss_dssp TSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHH-HHHHHHHHHHCT-TTEEEEEEEEEEEGGGHH
T ss_pred CCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHH-HHHHHHHHHHhcCcccCccceEEEeecccHH
Confidence 9999999999988765410 011111111122 3555699999999999999999999999999
Q ss_pred HHHHHHhhCCCeeeEEEEcC
Q 004766 574 LVGACINQRPDLFGCALAHV 593 (732)
Q Consensus 574 l~~~~~~~~p~~f~a~v~~~ 593 (732)
.++++++. .|+++|+|+..
T Consensus 239 ~a~~LaAL-DdRIka~v~~~ 257 (390)
T PF12715_consen 239 RAWWLAAL-DDRIKATVANG 257 (390)
T ss_dssp HHHHHHHH--TT--EEEEES
T ss_pred HHHHHHHc-chhhHhHhhhh
Confidence 99999999 45777776543
No 76
>PLN00021 chlorophyllase
Probab=99.48 E-value=5.5e-12 Score=129.68 Aligned_cols=207 Identities=14% Similarity=0.120 Sum_probs=134.2
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHH
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCF 542 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~ 542 (732)
..+|+.++.|.. .+++|+||++||+.+.. ..|. .....|+++||+|+++|++|.+.. .....+
T Consensus 37 ~~~p~~v~~P~~---~g~~PvVv~lHG~~~~~--~~y~-~l~~~Las~G~~VvapD~~g~~~~-----------~~~~~i 99 (313)
T PLN00021 37 PPKPLLVATPSE---AGTYPVLLFLHGYLLYN--SFYS-QLLQHIASHGFIVVAPQLYTLAGP-----------DGTDEI 99 (313)
T ss_pred CCceEEEEeCCC---CCCCCEEEEECCCCCCc--ccHH-HHHHHHHhCCCEEEEecCCCcCCC-----------CchhhH
Confidence 679999999975 47899999999986542 2233 345566779999999999873211 112345
Q ss_pred HHHHHHHHHHHHc--------CCCCCCcEEEEecChhHHHHHHHHhhCCC-----eeeEEEEcCCcccccccccCCCCCc
Q 004766 543 DDFISASEYLISA--------GYTQSRKLCIEGGSNGGLLVGACINQRPD-----LFGCALAHVGVMDMLRYHKFTIGHA 609 (732)
Q Consensus 543 ~D~~~~~~~l~~~--------~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-----~f~a~v~~~p~~d~~~~~~~~~~~~ 609 (732)
+|..++++|+.+. ...|++|++++|||+||+++..++..+++ .|+++|...|+..+.... .+
T Consensus 100 ~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~-~~---- 174 (313)
T PLN00021 100 KDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGK-QT---- 174 (313)
T ss_pred HHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccccccc-CC----
Confidence 6777777877652 23677999999999999999999998775 578888777765432110 01
Q ss_pred cccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCC-----CCC----chH-HHHHHHHHHHhh
Q 004766 610 WVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDD-----RVV----PLH-SLKLLATMQYVL 679 (732)
Q Consensus 610 ~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~-----~v~----~~~-~~~~~~~l~~~~ 679 (732)
++.. ..+.|- .. .+..|+||+++..|. .+| ... ..+|+++.
T Consensus 175 ---------~p~i----l~~~~~--s~----------~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~---- 225 (313)
T PLN00021 175 ---------PPPV----LTYAPH--SF----------NLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNEC---- 225 (313)
T ss_pred ---------CCcc----cccCcc--cc----------cCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhc----
Confidence 1100 111111 11 145799999998764 222 332 36666543
Q ss_pred cCCCCCCCCCCCEEEEEeCCCCCCCC--------------------Cch-HHHHHHHHHHHHHHHHHhCCC
Q 004766 680 CTSLENSPQTNPIIGRIERKAGHGVG--------------------LPT-QKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~gH~~~--------------------~~~-~~~~~~~~~~~~fl~~~l~~~ 729 (732)
..|..+.+.+++||... .++ ..+......+.+||..+|..+
T Consensus 226 ---------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 226 ---------KAPAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred ---------CCCeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 44778888899999642 111 112334456789999998754
No 77
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.46 E-value=1.1e-12 Score=118.13 Aligned_cols=198 Identities=17% Similarity=0.128 Sum_probs=131.4
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCC--CccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhH
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGF--NISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 529 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~--~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~ 529 (732)
.++.+..+-| .+.+..-.++ ....|+.|.+|--+ +.++...-.......|.++||.++.+|+||-|..
T Consensus 5 ~~v~i~Gp~G--~le~~~~~~~----~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S---- 74 (210)
T COG2945 5 PTVIINGPAG--RLEGRYEPAK----TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRS---- 74 (210)
T ss_pred CcEEecCCcc--cceeccCCCC----CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccc----
Confidence 3455665555 4444433222 25678888877654 3332222223345667779999999999998754
Q ss_pred HhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCc
Q 004766 530 HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHA 609 (732)
Q Consensus 530 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~ 609 (732)
+|..+++....+|..+|++||+++.- +..-..+.|+|.|+++++.++.+.|+. ...++..|..+.
T Consensus 75 --~G~fD~GiGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~----------- 139 (210)
T COG2945 75 --QGEFDNGIGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINA----------- 139 (210)
T ss_pred --cCcccCCcchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCCc-----------
Confidence 45567778889999999999998853 333357899999999999999987763 344444554431
Q ss_pred cccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCC
Q 004766 610 WVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT 689 (732)
Q Consensus 610 ~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 689 (732)
| .+ | .+.. +-.|.|+++|+.|+.|.+....++.+ +
T Consensus 140 ~-----------df------s---~l~P----------~P~~~lvi~g~~Ddvv~l~~~l~~~~---------------~ 174 (210)
T COG2945 140 Y-----------DF------S---FLAP----------CPSPGLVIQGDADDVVDLVAVLKWQE---------------S 174 (210)
T ss_pred h-----------hh------h---hccC----------CCCCceeEecChhhhhcHHHHHHhhc---------------C
Confidence 0 00 0 0111 34589999999998888776666543 4
Q ss_pred CCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHH
Q 004766 690 NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 722 (732)
Q Consensus 690 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 722 (732)
.+..+++.++++|+|.... ......+.+||
T Consensus 175 ~~~~~i~i~~a~HFF~gKl---~~l~~~i~~~l 204 (210)
T COG2945 175 IKITVITIPGADHFFHGKL---IELRDTIADFL 204 (210)
T ss_pred CCCceEEecCCCceecccH---HHHHHHHHHHh
Confidence 5678888899999997533 33344566777
No 78
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.46 E-value=6.5e-13 Score=133.73 Aligned_cols=203 Identities=15% Similarity=0.092 Sum_probs=121.5
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCC
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 559 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 559 (732)
..|+||++||...... .|. .+...|. +||.|+++|+||.|.... .....+++++.+.+..+++. .+
T Consensus 12 ~~~~li~~hg~~~~~~--~~~-~~~~~l~-~~~~v~~~d~~G~G~s~~--------~~~~~~~~~~~~~~~~~i~~--~~ 77 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR--MWD-PVLPALT-PDFRVLRYDKRGHGLSDA--------PEGPYSIEDLADDVLALLDH--LG 77 (251)
T ss_pred CCCeEEEEcCcccchh--hHH-HHHHHhh-cccEEEEecCCCCCCCCC--------CCCCCCHHHHHHHHHHHHHH--hC
Confidence 5689999999654432 333 3456677 899999999999876421 11233566767666666654 23
Q ss_pred CCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc-------CC-CC---------Cccc-cccCCCCCH-
Q 004766 560 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK-------FT-IG---------HAWV-SDFGCSEEE- 620 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~-------~~-~~---------~~~~-~~~g~p~~~- 620 (732)
.+++.++|+|+||+++..++.++|++++++|+..+...+..... .. .+ ..|. ..+..+...
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPAR 157 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHH
Confidence 46899999999999999999999999998887665432111000 00 00 0000 011111100
Q ss_pred -HHHH-HH---------------HhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCC
Q 004766 621 -EEFY-WL---------------IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSL 683 (732)
Q Consensus 621 -~~~~-~~---------------~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~ 683 (732)
+.+. .+ ...+....+. .+..|+|+++|.+|..+|+....++.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~------ 221 (251)
T TIGR02427 158 LDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLG----------AIAVPTLCIAGDQDGSTPPELVREIADLVPG------ 221 (251)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhh----------hcCCCeEEEEeccCCcCChHHHHHHHHhCCC------
Confidence 0111 00 0011111122 2678999999999999999877776655432
Q ss_pred CCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHH
Q 004766 684 ENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 722 (732)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 722 (732)
..+++++++||.......+ .....+.+||
T Consensus 222 --------~~~~~~~~~gH~~~~~~p~--~~~~~i~~fl 250 (251)
T TIGR02427 222 --------ARFAEIRGAGHIPCVEQPE--AFNAALRDFL 250 (251)
T ss_pred --------ceEEEECCCCCcccccChH--HHHHHHHHHh
Confidence 4778889999987543322 3333445554
No 79
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.46 E-value=3.3e-12 Score=131.26 Aligned_cols=207 Identities=12% Similarity=0.003 Sum_probs=123.6
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCC
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 559 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 559 (732)
..|+||++||..+... .|.. +...|+ ++|.|+++|+||.|...... ....+++++.+.+..+++. .+
T Consensus 27 ~~~~vv~~hG~~~~~~--~~~~-~~~~l~-~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~i~~--~~ 93 (278)
T TIGR03056 27 AGPLLLLLHGTGASTH--SWRD-LMPPLA-RSFRVVAPDLPGHGFTRAPF-------RFRFTLPSMAEDLSALCAA--EG 93 (278)
T ss_pred CCCeEEEEcCCCCCHH--HHHH-HHHHHh-hCcEEEeecCCCCCCCCCcc-------ccCCCHHHHHHHHHHHHHH--cC
Confidence 3589999999866532 3433 455677 68999999999987542211 1124567777766666654 23
Q ss_pred CCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccc-c-----------c-CCC-----------CCcccccc-
Q 004766 560 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY-H-----------K-FTI-----------GHAWVSDF- 614 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~-~-----------~-~~~-----------~~~~~~~~- 614 (732)
.+++.++|+|+||.+++.++.++|++.+++|+..+....... . . ... ...+...+
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIR 173 (278)
T ss_pred CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhh
Confidence 357899999999999999999999988888877664332110 0 0 000 00000000
Q ss_pred --CCCCCHHHHHHH-----------------HhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHH
Q 004766 615 --GCSEEEEEFYWL-----------------IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATM 675 (732)
Q Consensus 615 --g~p~~~~~~~~~-----------------~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l 675 (732)
+...++.....+ ..++...... ....+..|+|+++|.+|..||+..+..+.+.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~ 246 (278)
T TIGR03056 174 DTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNR-------DLPRITIPLHLIAGEEDKAVPPDESKRAATRV 246 (278)
T ss_pred ccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhh-------hcccCCCCEEEEEeCCCcccCHHHHHHHHHhc
Confidence 010011111101 0111000000 01137789999999999999998887776554
Q ss_pred HHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHH
Q 004766 676 QYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 722 (732)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 722 (732)
.+ .++.+++++||.+..... .+....+.+|+
T Consensus 247 ~~--------------~~~~~~~~~gH~~~~e~p--~~~~~~i~~f~ 277 (278)
T TIGR03056 247 PT--------------ATLHVVPGGGHLVHEEQA--DGVVGLILQAA 277 (278)
T ss_pred cC--------------CeEEEECCCCCcccccCH--HHHHHHHHHHh
Confidence 42 377888999998765432 24555666665
No 80
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.46 E-value=3.9e-12 Score=125.19 Aligned_cols=239 Identities=14% Similarity=0.079 Sum_probs=145.5
Q ss_pred EEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccc
Q 004766 455 FVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGA 534 (732)
Q Consensus 455 ~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~ 534 (732)
.+..+||..-.-.|..-|.+ ...|+||..||--|++.++ |...+...+.++||.++++|.||.++.-.. ..
T Consensus 53 ~v~~pdg~~~~ldw~~~p~~----~~~P~vVl~HGL~G~s~s~-y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~----~p 123 (345)
T COG0429 53 RLETPDGGFIDLDWSEDPRA----AKKPLVVLFHGLEGSSNSP-YARGLMRALSRRGWLVVVFHFRGCSGEANT----SP 123 (345)
T ss_pred EEEcCCCCEEEEeeccCccc----cCCceEEEEeccCCCCcCH-HHHHHHHHHHhcCCeEEEEecccccCCccc----Cc
Confidence 44455661333344443443 4569999999988887766 666666777779999999999997753110 01
Q ss_pred ccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhH-HHHHHHHhhC--CCeeeEEEEcCCcccccc-cccCCC----
Q 004766 535 LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGG-LLVGACINQR--PDLFGCALAHVGVMDMLR-YHKFTI---- 606 (732)
Q Consensus 535 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG-~l~~~~~~~~--p~~f~a~v~~~p~~d~~~-~~~~~~---- 606 (732)
........+|+..++++|.+++. +.++.++|.|+|| +|+..+.-+. +-.-+|++..+|+ |+.. ...+..
T Consensus 124 ~~yh~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~-Dl~~~~~~l~~~~s~ 200 (345)
T COG0429 124 RLYHSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF-DLEACAYRLDSGFSL 200 (345)
T ss_pred ceecccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH-HHHHHHHHhcCchhh
Confidence 11122335999999999999765 6799999999999 5555554442 2234444555553 3210 000000
Q ss_pred --------------------------CCc---------cccccCC----C--CCHHHHHHHHhcCcccCCCCCCCCCCCC
Q 004766 607 --------------------------GHA---------WVSDFGC----S--EEEEEFYWLIKYSPLHNVRRPWEQNPDK 645 (732)
Q Consensus 607 --------------------------~~~---------~~~~~g~----p--~~~~~~~~~~~~sp~~~~~~~~~~~~~~ 645 (732)
+.. -..||-+ | .-++..+++++-|++..+.+
T Consensus 201 ~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~-------- 272 (345)
T COG0429 201 RLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPK-------- 272 (345)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccc--------
Confidence 000 0011211 1 11234467888899888887
Q ss_pred CCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCC-C--chHHHHHHHHHHHHHH
Q 004766 646 PFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVG-L--PTQKMIDEAADRYGFM 722 (732)
Q Consensus 646 ~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~--~~~~~~~~~~~~~~fl 722 (732)
|..|+||+|+.+|+.+++..--+.-.. . +..++|.+...+||.+. . ..+...=..+++.+||
T Consensus 273 --Ir~PtLii~A~DDP~~~~~~iP~~~~~---~----------np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l 337 (345)
T COG0429 273 --IRKPTLIINAKDDPFMPPEVIPKLQEM---L----------NPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWL 337 (345)
T ss_pred --cccceEEEecCCCCCCChhhCCcchhc---C----------CCceEEEeecCCceEEeccCccccchhhHHHHHHHHH
Confidence 889999999999999987542222111 1 55689999999999642 1 1111111234678888
Q ss_pred HHHhCC
Q 004766 723 AKMLGA 728 (732)
Q Consensus 723 ~~~l~~ 728 (732)
...+..
T Consensus 338 ~~~~~~ 343 (345)
T COG0429 338 DPFLEA 343 (345)
T ss_pred HHHHhh
Confidence 877643
No 81
>PRK11071 esterase YqiA; Provisional
Probab=99.46 E-value=2.2e-12 Score=123.41 Aligned_cols=182 Identities=14% Similarity=-0.007 Sum_probs=113.8
Q ss_pred cEEEEEcCCCCccCCCCcCh-hHHHHHHh--cCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 482 PCLLYGYGGFNISVTPSFSV-SRTILMRH--LGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 482 P~vv~~hG~~~~~~~~~~~~-~~~~~l~~--~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
|.||++||..++... |.. .+..++.+ .+|.|.++|.||.+ ++..+.++.++++.
T Consensus 2 p~illlHGf~ss~~~--~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~~-- 58 (190)
T PRK11071 2 STLLYLHGFNSSPRS--AKATLLKNWLAQHHPDIEMIVPQLPPYP-------------------ADAAELLESLVLEH-- 58 (190)
T ss_pred CeEEEECCCCCCcch--HHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------------HHHHHHHHHHHHHc--
Confidence 789999997765432 332 23355553 38999999999842 24555556666542
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccC--CCCCHHHHHHHHhcCcccCCC
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFG--CSEEEEEFYWLIKYSPLHNVR 636 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g--~p~~~~~~~~~~~~sp~~~~~ 636 (732)
+.+++.++|+|+||+++..++.++|. + +|+..|..+.......-.+.......+ -+-..+.++.++.+.+.. ++
T Consensus 59 ~~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-i~ 134 (190)
T PRK11071 59 GGDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDP-LE 134 (190)
T ss_pred CCCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCcc-CC
Confidence 23589999999999999999999884 3 456666666422211001110000011 112234444455554332 22
Q ss_pred CCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHH
Q 004766 637 RPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAA 716 (732)
Q Consensus 637 ~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 716 (732)
...|+||+||.+|..||+.++.+++++. .+.+.++++|.+... .+...
T Consensus 135 -----------~~~~v~iihg~~De~V~~~~a~~~~~~~-----------------~~~~~~ggdH~f~~~----~~~~~ 182 (190)
T PRK11071 135 -----------SPDLIWLLQQTGDEVLDYRQAVAYYAAC-----------------RQTVEEGGNHAFVGF----ERYFN 182 (190)
T ss_pred -----------ChhhEEEEEeCCCCcCCHHHHHHHHHhc-----------------ceEEECCCCcchhhH----HHhHH
Confidence 3568899999999999999999998742 334669999999653 24455
Q ss_pred HHHHHH
Q 004766 717 DRYGFM 722 (732)
Q Consensus 717 ~~~~fl 722 (732)
.+.+|+
T Consensus 183 ~i~~fl 188 (190)
T PRK11071 183 QIVDFL 188 (190)
T ss_pred HHHHHh
Confidence 667775
No 82
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.43 E-value=1.5e-11 Score=127.54 Aligned_cols=228 Identities=10% Similarity=0.006 Sum_probs=129.8
Q ss_pred CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCc
Q 004766 460 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQ 539 (732)
Q Consensus 460 dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~ 539 (732)
+| .++.+... |..|.||++||.+++.. .|.. ....|.++ |.|+++|.||.|..... ...
T Consensus 15 ~g-~~i~y~~~--------G~g~~vvllHG~~~~~~--~w~~-~~~~L~~~-~~via~D~~G~G~S~~~--------~~~ 73 (295)
T PRK03592 15 LG-SRMAYIET--------GEGDPIVFLHGNPTSSY--LWRN-IIPHLAGL-GRCLAPDLIGMGASDKP--------DID 73 (295)
T ss_pred CC-EEEEEEEe--------CCCCEEEEECCCCCCHH--HHHH-HHHHHhhC-CEEEEEcCCCCCCCCCC--------CCC
Confidence 77 77765432 24478999999876643 3333 34556635 49999999998865322 111
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccc-------------cccCCC
Q 004766 540 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR-------------YHKFTI 606 (732)
Q Consensus 540 ~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~-------------~~~~~~ 606 (732)
.++++..+.+..+++. ...+++.++|+|+||.+++.++.++|++++++|+..++..... ......
T Consensus 74 ~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (295)
T PRK03592 74 YTFADHARYLDAWFDA--LGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPG 151 (295)
T ss_pred CCHHHHHHHHHHHHHH--hCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcc
Confidence 2445555444444443 2236899999999999999999999999999998776321100 000000
Q ss_pred -CCc-------ccc-----ccCCCCCHHHHHHHH-----------------hcCcccCCCCCCC----CCCCCCCCCCeE
Q 004766 607 -GHA-------WVS-----DFGCSEEEEEFYWLI-----------------KYSPLHNVRRPWE----QNPDKPFQYPST 652 (732)
Q Consensus 607 -~~~-------~~~-----~~g~p~~~~~~~~~~-----------------~~sp~~~~~~~~~----~~~~~~~~~~p~ 652 (732)
+.. ... .+.....++....+. +..+......... .......+..|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 231 (295)
T PRK03592 152 EGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPK 231 (295)
T ss_pred cccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCe
Confidence 000 000 000001111111111 1100000000000 000011378999
Q ss_pred EEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 004766 653 LLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 653 Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 725 (732)
|+++|.+|..+++.+..++...+.. ..++.+.+++||....... .+..+.+.+|+.+.
T Consensus 232 lii~G~~D~~~~~~~~~~~~~~~~~-------------~~~~~~i~~~gH~~~~e~p--~~v~~~i~~fl~~~ 289 (295)
T PRK03592 232 LLINAEPGAILTTGAIRDWCRSWPN-------------QLEITVFGAGLHFAQEDSP--EEIGAAIAAWLRRL 289 (295)
T ss_pred EEEeccCCcccCcHHHHHHHHHhhh-------------hcceeeccCcchhhhhcCH--HHHHHHHHHHHHHh
Confidence 9999999999977666666554432 2477888999999875433 35556778898765
No 83
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.43 E-value=1.4e-12 Score=124.44 Aligned_cols=201 Identities=15% Similarity=0.110 Sum_probs=132.7
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCc-cEEEEEcCCCCccCCCCcChhHHHHHHhc----------CcEEEEEcccCCCCCch
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSH-PCLLYGYGGFNISVTPSFSVSRTILMRHL----------GAVFCIANIRGGGEYGE 527 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~-P~vv~~hG~~~~~~~~~~~~~~~~~l~~~----------G~~v~~~~~rG~g~~g~ 527 (732)
.-| .++++.++.|+++.+++++ |++|+.||+.....+.. ..++... ++-|++|.+ ..
T Consensus 169 ~tg-neLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~-----~~l~sg~gaiawa~pedqcfVlAPQy------~~ 236 (387)
T COG4099 169 STG-NELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDND-----KVLSSGIGAIAWAGPEDQCFVLAPQY------NP 236 (387)
T ss_pred ccC-ceeeEEEecccccCCCCccccEEEEEecCCCCCchhh-----hhhhcCccceeeecccCceEEEcccc------cc
Confidence 356 7999999999999988888 99999999876543321 1222222 233333331 11
Q ss_pred hHHhcccccCCccHHHHHHHHHH-HHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCC
Q 004766 528 EWHKGGALAKKQNCFDDFISASE-YLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTI 606 (732)
Q Consensus 528 ~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~ 606 (732)
-+... ..+..+...-.+..++ -|.+.--+|.+||.+.|.|+||+.+.+++.++||.|+|++..+|=-|-
T Consensus 237 if~d~--e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~-------- 306 (387)
T COG4099 237 IFADS--EEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR-------- 306 (387)
T ss_pred ccccc--ccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch--------
Confidence 11111 1122233444555555 566777799999999999999999999999999999999977662110
Q ss_pred CCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCC
Q 004766 607 GHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENS 686 (732)
Q Consensus 607 ~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 686 (732)
+ ..++.+ .+.|+-+.|+.+|..+|...++-.+++|+..
T Consensus 307 ------------------------v-~lv~~l---------k~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~-------- 344 (387)
T COG4099 307 ------------------------V-YLVRTL---------KKAPIWVFHSSDDKVIPVSNSRVLYERLKAL-------- 344 (387)
T ss_pred ------------------------h-hhhhhh---------ccCceEEEEecCCCccccCcceeehHHHHhh--------
Confidence 1 112221 4679999999999999999999999999988
Q ss_pred CCCCCEEEEEeC---CCCCCCCCch-HHHHHHHHHHHHHHHHH
Q 004766 687 PQTNPIIGRIER---KAGHGVGLPT-QKMIDEAADRYGFMAKM 725 (732)
Q Consensus 687 ~~~~~~~~~~~~---~~gH~~~~~~-~~~~~~~~~~~~fl~~~ 725 (732)
++++.+..|. -.-||..... ....-..+..++||.++
T Consensus 345 --~~kv~Ytaf~~g~~~~eG~d~~g~w~atyn~~eaieWLl~Q 385 (387)
T COG4099 345 --DRKVNYTAFLEGTTVLEGVDHSGVWWATYNDAEAIEWLLKQ 385 (387)
T ss_pred --ccccchhhhhhccccccccCCCCcceeecCCHHHHHHHHhc
Confidence 6777776665 2234432111 11112234567787664
No 84
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.43 E-value=4.7e-12 Score=131.94 Aligned_cols=122 Identities=14% Similarity=0.107 Sum_probs=81.4
Q ss_pred EEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccc
Q 004766 455 FVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGA 534 (732)
Q Consensus 455 ~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~ 534 (732)
++...|| .+|.+...-+ ...+.||++||+++.... ......+...+|.|+++|.||.|.....
T Consensus 8 ~~~~~~~-~~l~y~~~g~------~~~~~lvllHG~~~~~~~----~~~~~~~~~~~~~vi~~D~~G~G~S~~~------ 70 (306)
T TIGR01249 8 YLNVSDN-HQLYYEQSGN------PDGKPVVFLHGGPGSGTD----PGCRRFFDPETYRIVLFDQRGCGKSTPH------ 70 (306)
T ss_pred eEEcCCC-cEEEEEECcC------CCCCEEEEECCCCCCCCC----HHHHhccCccCCEEEEECCCCCCCCCCC------
Confidence 3445578 7776543211 124568999998776432 1222334347999999999997753211
Q ss_pred ccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 535 LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 535 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
.......++|+.+.+..+++. ...+++.++|+|+||++++.++.++|++++++|+..++
T Consensus 71 ~~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (306)
T TIGR01249 71 ACLEENTTWDLVADIEKLREK--LGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIF 129 (306)
T ss_pred CCcccCCHHHHHHHHHHHHHH--cCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccc
Confidence 111123456777777777655 23458999999999999999999999999888876553
No 85
>PLN02872 triacylglycerol lipase
Probab=99.43 E-value=1.7e-12 Score=137.68 Aligned_cols=146 Identities=19% Similarity=0.225 Sum_probs=97.5
Q ss_pred CCCceEEEEEEEccCCCeeEEEEEEEcCCC-CCCCCccEEEEEcCCCCccCCCCcC---hhHHHHHHhcCcEEEEEcccC
Q 004766 446 RSEFHVHQVFVPSKDGSTKIPMFIVSKKNI-KLDGSHPCLLYGYGGFNISVTPSFS---VSRTILMRHLGAVFCIANIRG 521 (732)
Q Consensus 446 ~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~-~~~~~~P~vv~~hG~~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~rG 521 (732)
...|.+|+..+++.|| ..+.+.-+.+... ....+.|.||+.||...++..+... ......|+++||.|.++|.||
T Consensus 39 ~~gy~~e~h~v~T~DG-y~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG 117 (395)
T PLN02872 39 PAGYSCTEHTIQTKDG-YLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRG 117 (395)
T ss_pred HcCCCceEEEEECCCC-cEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccc
Confidence 4468889999999999 8888876643321 1123468899999987665544322 123445666999999999999
Q ss_pred CCC-CchhHHhccc-----ccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCC---eeeEEEEc
Q 004766 522 GGE-YGEEWHKGGA-----LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD---LFGCALAH 592 (732)
Q Consensus 522 ~g~-~g~~~~~~~~-----~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~ 592 (732)
.+. +|........ ..+......|+.++++++.+.. .+++.++|||+||.++..++ .+|+ .++++++.
T Consensus 118 ~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l 193 (395)
T PLN02872 118 TRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALL 193 (395)
T ss_pred cccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHh
Confidence 763 3322211110 1111233579999999998652 36899999999999998666 4687 46666666
Q ss_pred CCcc
Q 004766 593 VGVM 596 (732)
Q Consensus 593 ~p~~ 596 (732)
+|+.
T Consensus 194 ~P~~ 197 (395)
T PLN02872 194 CPIS 197 (395)
T ss_pred cchh
Confidence 6653
No 86
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.42 E-value=4.2e-12 Score=130.88 Aligned_cols=108 Identities=17% Similarity=0.100 Sum_probs=76.7
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCC
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 559 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 559 (732)
..|.||++||++++.. .+...+..++.+.||.|+++|.||.|...... ......+++++.+.+..+++. .+
T Consensus 24 ~~~~vl~~hG~~g~~~--~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~ 94 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSH--EYLENLRELLKEEGREVIMYDQLGCGYSDQPD-----DSDELWTIDYFVDELEEVREK--LG 94 (288)
T ss_pred CCCeEEEEcCCCCccH--HHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCC-----cccccccHHHHHHHHHHHHHH--cC
Confidence 4578999999987642 23333456677459999999999987532100 001123566666666666654 23
Q ss_pred CCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 560 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
.+++.++|+|+||.++..++.++|++++++|+..++.
T Consensus 95 ~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 95 LDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred CCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 4579999999999999999999999999999877654
No 87
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.42 E-value=5.2e-12 Score=131.01 Aligned_cols=215 Identities=13% Similarity=-0.011 Sum_probs=125.7
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
.|.||++||..+++. .|.... ..|. ..|.|+++|.||.|.....-. .........+++|+...+..+++.-. .
T Consensus 29 ~~~vlllHG~~~~~~--~w~~~~-~~L~-~~~~vi~~DlpG~G~S~~~~~-~~~~~~~~~~~~~~a~~l~~~l~~l~--~ 101 (294)
T PLN02824 29 GPALVLVHGFGGNAD--HWRKNT-PVLA-KSHRVYAIDLLGYGYSDKPNP-RSAPPNSFYTFETWGEQLNDFCSDVV--G 101 (294)
T ss_pred CCeEEEECCCCCChh--HHHHHH-HHHH-hCCeEEEEcCCCCCCCCCCcc-ccccccccCCHHHHHHHHHHHHHHhc--C
Confidence 478999999877653 444433 4456 447999999999886432100 00000123456777766666554422 3
Q ss_pred CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc-----------------cCC-CCCccc-----------
Q 004766 561 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH-----------------KFT-IGHAWV----------- 611 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~-----------------~~~-~~~~~~----------- 611 (732)
+++.++|+|+||+++..++.++|++++++|+..|........ ... .+..+.
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKN 181 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHH
Confidence 689999999999999999999999999999877643111000 000 000000
Q ss_pred ---cccCCC--CCHHHHHHHHh----------------cCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHH
Q 004766 612 ---SDFGCS--EEEEEFYWLIK----------------YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLK 670 (732)
Q Consensus 612 ---~~~g~p--~~~~~~~~~~~----------------~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~ 670 (732)
..|+++ .+++..+.+.. ++....... ....+.+|+|+++|.+|..+|...+.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~i~~P~lvi~G~~D~~~~~~~~~~ 255 (294)
T PLN02824 182 ILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEE------LLPAVKCPVLIAWGEKDPWEPVELGRA 255 (294)
T ss_pred HHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHH------HHhhcCCCeEEEEecCCCCCChHHHHH
Confidence 012221 11111111111 111000000 011378999999999999999887766
Q ss_pred HHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 671 LLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 671 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
+.+.+ ...++.+++++||....... ....+.+.+|+.+
T Consensus 256 ~~~~~--------------~~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 293 (294)
T PLN02824 256 YANFD--------------AVEDFIVLPGVGHCPQDEAP--ELVNPLIESFVAR 293 (294)
T ss_pred HHhcC--------------CccceEEeCCCCCChhhhCH--HHHHHHHHHHHhc
Confidence 43322 12478888999998765433 3456667888865
No 88
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.39 E-value=1.1e-11 Score=125.66 Aligned_cols=206 Identities=15% Similarity=0.043 Sum_probs=118.2
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCC
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 557 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 557 (732)
.+..|.||++||.++... .|.. ....|. ++|.|+.+|.||.|+.... ...++++..+-+..+++.
T Consensus 13 ~~~~~~iv~lhG~~~~~~--~~~~-~~~~l~-~~~~vi~~D~~G~G~s~~~---------~~~~~~~~~~d~~~~l~~-- 77 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLD--NLGV-LARDLV-NDHDIIQVDMRNHGLSPRD---------PVMNYPAMAQDLLDTLDA-- 77 (255)
T ss_pred CCCCCCEEEECCCCCchh--HHHH-HHHHHh-hCCeEEEECCCCCCCCCCC---------CCCCHHHHHHHHHHHHHH--
Confidence 356789999999877642 3333 344566 7899999999998865321 112334433333333332
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcC--Ccccccccc-------c-C-CCC-Ccc------ccccCCCC-
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHV--GVMDMLRYH-------K-F-TIG-HAW------VSDFGCSE- 618 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~--p~~d~~~~~-------~-~-~~~-~~~------~~~~g~p~- 618 (732)
...+++.++|+|+||.++..++.++|++++++|+.. |..-..... . . ..+ ..+ ....-...
T Consensus 78 l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (255)
T PRK10673 78 LQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEG 157 (255)
T ss_pred cCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHH
Confidence 234679999999999999999999999999988753 221100000 0 0 000 000 00000000
Q ss_pred -----------------CHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcC
Q 004766 619 -----------------EEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCT 681 (732)
Q Consensus 619 -----------------~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~ 681 (732)
.+..+..+.....+..+. .+..|+|+++|.+|..|++..+..+.+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----- 222 (255)
T PRK10673 158 VIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIP----------AWPHPALFIRGGNSPYVTEAYRDDLLAQFP----- 222 (255)
T ss_pred HHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccC----------CCCCCeEEEECCCCCCCCHHHHHHHHHhCC-----
Confidence 000000111111111111 267899999999999999876666655433
Q ss_pred CCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 682 SLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
...+.+++++||....... ......+..||.+
T Consensus 223 ---------~~~~~~~~~~gH~~~~~~p--~~~~~~l~~fl~~ 254 (255)
T PRK10673 223 ---------QARAHVIAGAGHWVHAEKP--DAVLRAIRRYLND 254 (255)
T ss_pred ---------CcEEEEeCCCCCeeeccCH--HHHHHHHHHHHhc
Confidence 2477889999998654332 2455566777754
No 89
>PLN02965 Probable pheophorbidase
Probab=99.38 E-value=2.4e-11 Score=123.12 Aligned_cols=213 Identities=13% Similarity=0.129 Sum_probs=121.0
Q ss_pred EEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC-C
Q 004766 483 CLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS-R 561 (732)
Q Consensus 483 ~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~-~ 561 (732)
+||++||..... ..|... ...|.++||.|+++|+||.|..... .....+++++.+.+..+++. .+. +
T Consensus 5 ~vvllHG~~~~~--~~w~~~-~~~L~~~~~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~--l~~~~ 72 (255)
T PLN02965 5 HFVFVHGASHGA--WCWYKL-ATLLDAAGFKSTCVDLTGAGISLTD-------SNTVSSSDQYNRPLFALLSD--LPPDH 72 (255)
T ss_pred EEEEECCCCCCc--CcHHHH-HHHHhhCCceEEEecCCcCCCCCCC-------ccccCCHHHHHHHHHHHHHh--cCCCC
Confidence 499999987653 345433 3556448999999999998854211 11123456666655555544 222 5
Q ss_pred cEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc---ccc---ccc--cCCCCCccccccC------------------
Q 004766 562 KLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM---DML---RYH--KFTIGHAWVSDFG------------------ 615 (732)
Q Consensus 562 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~---d~~---~~~--~~~~~~~~~~~~g------------------ 615 (732)
++.++|+||||.++..++.++|++++.+|...+.. +.. ... .......|...++
T Consensus 73 ~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
T PLN02965 73 KVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVR 152 (255)
T ss_pred CEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHH
Confidence 89999999999999999999999999988766541 110 000 0000000100000
Q ss_pred ----CCCCHHHHHHHHhc---CcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCC
Q 004766 616 ----CSEEEEEFYWLIKY---SPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQ 688 (732)
Q Consensus 616 ----~p~~~~~~~~~~~~---sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 688 (732)
+....+........ .+........+.......++.|+|+++|.+|..||+..+..+++.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~----------- 221 (255)
T PLN02965 153 HYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPP----------- 221 (255)
T ss_pred HHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc-----------
Confidence 00000001000000 011000000000000113789999999999999999888777766553
Q ss_pred CCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 689 TNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 689 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
.++.+++++||.......+ +....+.+|+.
T Consensus 222 ---a~~~~i~~~GH~~~~e~p~--~v~~~l~~~~~ 251 (255)
T PLN02965 222 ---AQTYVLEDSDHSAFFSVPT--TLFQYLLQAVS 251 (255)
T ss_pred ---ceEEEecCCCCchhhcCHH--HHHHHHHHHHH
Confidence 3678889999997654432 34445555543
No 90
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.37 E-value=1.4e-11 Score=132.99 Aligned_cols=126 Identities=12% Similarity=0.046 Sum_probs=85.1
Q ss_pred EEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHH---hcCcEEEEEcccCCCCCchhHHh
Q 004766 455 FVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMR---HLGAVFCIANIRGGGEYGEEWHK 531 (732)
Q Consensus 455 ~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~---~~G~~v~~~~~rG~g~~g~~~~~ 531 (732)
.|.+..| +++++....|.+. ...|.||++||..+... .|.......+. ++||.|+++|.||.|.....
T Consensus 179 ~~~~~~~-~~l~~~~~gp~~~---~~k~~VVLlHG~~~s~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p--- 249 (481)
T PLN03087 179 SWLSSSN-ESLFVHVQQPKDN---KAKEDVLFIHGFISSSA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKP--- 249 (481)
T ss_pred eeEeeCC-eEEEEEEecCCCC---CCCCeEEEECCCCccHH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCC---
Confidence 3444466 7888777776642 23478999999876542 33322212222 37999999999998764321
Q ss_pred cccccCCccHHHHHHHHHH-HHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 532 GGALAKKQNCFDDFISASE-YLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 532 ~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
.....+++++.+.+. .+++. ...+++.++|+|+||+++..++.++|++++++|+..|.
T Consensus 250 ----~~~~ytl~~~a~~l~~~ll~~--lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 250 ----ADSLYTLREHLEMIERSVLER--YKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred ----CCCcCCHHHHHHHHHHHHHHH--cCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 112235666666553 44443 23468999999999999999999999999999987753
No 91
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.37 E-value=9.8e-11 Score=117.05 Aligned_cols=214 Identities=12% Similarity=-0.001 Sum_probs=135.1
Q ss_pred EEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCC-cChhHHHHHHhcCcEEEEEcccCCCCCchhHHhc
Q 004766 454 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPS-FSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKG 532 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~ 532 (732)
+++++..| .+.++++.|.+. ++.|+||++||..+...... ........|+++||.|+.+|+||.|........
T Consensus 3 ~~l~~~~g--~~~~~~~~p~~~---~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~- 76 (266)
T TIGR03101 3 FFLDAPHG--FRFCLYHPPVAV---GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA- 76 (266)
T ss_pred EEecCCCC--cEEEEEecCCCC---CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-
Confidence 56677777 566777766542 45799999999644321111 111234556669999999999998764322111
Q ss_pred ccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc---------
Q 004766 533 GALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK--------- 603 (732)
Q Consensus 533 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~--------- 603 (732)
..-....+|+.+++++|.+++ ..++.++|+|+||.++..++.++|+.++++|+..|++.-..+..
T Consensus 77 ---~~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~ 150 (266)
T TIGR03101 77 ---ARWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLVA 150 (266)
T ss_pred ---CCHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHHH
Confidence 111123588999999998764 36899999999999999999999999999999999876432211
Q ss_pred -CCCCCc---------------cccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeC-CCCCCCch
Q 004766 604 -FTIGHA---------------WVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD-HDDRVVPL 666 (732)
Q Consensus 604 -~~~~~~---------------~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~-~D~~v~~~ 666 (732)
...+.. ...-.|-.-.++..+.|.+.....-+. ...++|++... .+..-...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 219 (266)
T TIGR03101 151 RRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVP-----------KNCPVHWFEVRPEEGATLSP 219 (266)
T ss_pred HhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCC-----------CCCceEEEEeccccCCCCCH
Confidence 000000 001112222334444444433211111 23456666553 33444556
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCC
Q 004766 667 HSLKLLATMQYVLCTSLENSPQTNPIIGRIERKA 700 (732)
Q Consensus 667 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (732)
...++++++++. |..++...+++.
T Consensus 220 ~~~~l~~~~~~~----------g~~v~~~~~~~~ 243 (266)
T TIGR03101 220 VFSRLGEQWVQS----------GVEVTVDLVPGP 243 (266)
T ss_pred HHHHHHHHHHHc----------CCeEeeeecCCc
Confidence 788999999998 999999999987
No 92
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.37 E-value=1.7e-11 Score=126.32 Aligned_cols=103 Identities=14% Similarity=0.026 Sum_probs=75.4
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCC
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 559 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 559 (732)
..|.||++||.+... ..|.. ....|. ++|.|+++|.||.|..+.. ......++++.+.+..+++. .+
T Consensus 33 ~~~~iv~lHG~~~~~--~~~~~-~~~~l~-~~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~~~~~~~~--~~ 99 (286)
T PRK03204 33 TGPPILLCHGNPTWS--FLYRD-IIVALR-DRFRCVAPDYLGFGLSERP-------SGFGYQIDEHARVIGEFVDH--LG 99 (286)
T ss_pred CCCEEEEECCCCccH--HHHHH-HHHHHh-CCcEEEEECCCCCCCCCCC-------CccccCHHHHHHHHHHHHHH--hC
Confidence 458899999976432 22332 345566 7899999999998854321 01123567888888877765 24
Q ss_pred CCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 560 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
.+++.++|+|+||.++..++..+|++++++|+..+.
T Consensus 100 ~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 100 LDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred CCCEEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 468999999999999999999999999999876553
No 93
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.37 E-value=6.8e-12 Score=125.81 Aligned_cols=95 Identities=15% Similarity=0.061 Sum_probs=66.8
Q ss_pred cEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCC
Q 004766 482 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSR 561 (732)
Q Consensus 482 P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 561 (732)
|.||++||..+... .|. .....|. .+|.|+++|+||.|.... ....+++++... +.+. . .+
T Consensus 5 ~~iv~~HG~~~~~~--~~~-~~~~~l~-~~~~vi~~d~~G~G~s~~---------~~~~~~~~~~~~---~~~~--~-~~ 65 (245)
T TIGR01738 5 VHLVLIHGWGMNAE--VFR-CLDEELS-AHFTLHLVDLPGHGRSRG---------FGPLSLADAAEA---IAAQ--A-PD 65 (245)
T ss_pred ceEEEEcCCCCchh--hHH-HHHHhhc-cCeEEEEecCCcCccCCC---------CCCcCHHHHHHH---HHHh--C-CC
Confidence 78999999655432 343 2345666 789999999999876321 112234554444 3332 1 26
Q ss_pred cEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 562 KLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 562 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
++.++|+|+||++++.++.++|++++++|+..+.
T Consensus 66 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~ 99 (245)
T TIGR01738 66 PAIWLGWSLGGLVALHIAATHPDRVRALVTVASS 99 (245)
T ss_pred CeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCC
Confidence 8999999999999999999999999998876543
No 94
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.36 E-value=2.8e-11 Score=124.27 Aligned_cols=219 Identities=14% Similarity=0.041 Sum_probs=130.0
Q ss_pred CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCc
Q 004766 460 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQ 539 (732)
Q Consensus 460 dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~ 539 (732)
+| .++.+.... + +...|.||++||..+... .|.. +...|. .+|.|+++|+||.|..... ...
T Consensus 10 ~~-~~~~~~~~~--~---~~~~~plvllHG~~~~~~--~w~~-~~~~L~-~~~~vi~~Dl~G~G~S~~~--------~~~ 71 (276)
T TIGR02240 10 DG-QSIRTAVRP--G---KEGLTPLLIFNGIGANLE--LVFP-FIEALD-PDLEVIAFDVPGVGGSSTP--------RHP 71 (276)
T ss_pred CC-cEEEEEEec--C---CCCCCcEEEEeCCCcchH--HHHH-HHHHhc-cCceEEEECCCCCCCCCCC--------CCc
Confidence 67 777665431 1 112367999999765543 3433 345566 6899999999998865321 112
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccc------c---ccC---CCC
Q 004766 540 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR------Y---HKF---TIG 607 (732)
Q Consensus 540 ~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~------~---~~~---~~~ 607 (732)
.+++++.+.+..+++. .+.+++.++|+|+||++++.++.++|++.+++|+..+...... . ... ...
T Consensus 72 ~~~~~~~~~~~~~i~~--l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (276)
T TIGR02240 72 YRFPGLAKLAARMLDY--LDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQ 149 (276)
T ss_pred CcHHHHHHHHHHHHHH--hCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhc
Confidence 3455555555555544 2346899999999999999999999999999998876543110 0 000 000
Q ss_pred C-----ccccccCCC--CCHHHHHH-----------------HHhc--CcccCCCCCCCCCCCCCCCCCeEEEEeeCCCC
Q 004766 608 H-----AWVSDFGCS--EEEEEFYW-----------------LIKY--SPLHNVRRPWEQNPDKPFQYPSTLLLTADHDD 661 (732)
Q Consensus 608 ~-----~~~~~~g~p--~~~~~~~~-----------------~~~~--sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~ 661 (732)
. .....++.. .+++.... +... .....+. .+..|+|+++|++|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~i~~P~lii~G~~D~ 219 (276)
T TIGR02240 150 PSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLH----------KIQQPTLVLAGDDDP 219 (276)
T ss_pred cccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhh----------cCCCCEEEEEeCCCC
Confidence 0 000001100 01111000 0000 0001112 378899999999999
Q ss_pred CCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 004766 662 RVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 662 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 725 (732)
.||+.++.++.+.+.. .++.++++ ||....... .+....+.+|+.+.
T Consensus 220 ~v~~~~~~~l~~~~~~--------------~~~~~i~~-gH~~~~e~p--~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 220 IIPLINMRLLAWRIPN--------------AELHIIDD-GHLFLITRA--EAVAPIIMKFLAEE 266 (276)
T ss_pred cCCHHHHHHHHHhCCC--------------CEEEEEcC-CCchhhccH--HHHHHHHHHHHHHh
Confidence 9999988888766542 25555654 998665433 35566777888764
No 95
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.35 E-value=3.3e-11 Score=128.27 Aligned_cols=216 Identities=12% Similarity=0.023 Sum_probs=121.5
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
.|.||++||..+... .|... ...|. .+|.|+++|+||.|..... .....+++++.+.+..+++. ...
T Consensus 88 gp~lvllHG~~~~~~--~w~~~-~~~L~-~~~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~~l~~~l~~--l~~ 154 (360)
T PLN02679 88 GPPVLLVHGFGASIP--HWRRN-IGVLA-KNYTVYAIDLLGFGASDKP-------PGFSYTMETWAELILDFLEE--VVQ 154 (360)
T ss_pred CCeEEEECCCCCCHH--HHHHH-HHHHh-cCCEEEEECCCCCCCCCCC-------CCccccHHHHHHHHHHHHHH--hcC
Confidence 478999999876532 34433 34567 6899999999998864221 00123445555544444433 223
Q ss_pred CcEEEEecChhHHHHHHHHh-hCCCeeeEEEEcCCcccccc-----ccc--CCCCCcc----------------------
Q 004766 561 RKLCIEGGSNGGLLVGACIN-QRPDLFGCALAHVGVMDMLR-----YHK--FTIGHAW---------------------- 610 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~-~~p~~f~a~v~~~p~~d~~~-----~~~--~~~~~~~---------------------- 610 (732)
+++.++|+|+||+++..++. .+|++++++|+..+...+.. ... ...+..|
T Consensus 155 ~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (360)
T PLN02679 155 KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQR 234 (360)
T ss_pred CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCH
Confidence 68999999999999888776 47999999987765321100 000 0000000
Q ss_pred --c-----cccCCC--CCHHHHHHH-------------HhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHH
Q 004766 611 --V-----SDFGCS--EEEEEFYWL-------------IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHS 668 (732)
Q Consensus 611 --~-----~~~g~p--~~~~~~~~~-------------~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~ 668 (732)
. .-++++ .+++..+.+ ..+.. .... .+..+....+..|+||++|++|..+|+..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~i~~PtLii~G~~D~~~p~~~~ 311 (360)
T PLN02679 235 DNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVT--GPPG-PNPIKLIPRISLPILVLWGDQDPFTPLDGP 311 (360)
T ss_pred HHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHh--cCCC-CCHHHHhhhcCCCEEEEEeCCCCCcCchhh
Confidence 0 001111 111111111 10000 0000 000000113788999999999999998753
Q ss_pred -HHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 669 -LKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 669 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
.++.+.|.+. -...++++++++||....... .+..+.+.+||.+
T Consensus 312 ~~~~~~~l~~~----------ip~~~l~~i~~aGH~~~~E~P--e~~~~~I~~FL~~ 356 (360)
T PLN02679 312 VGKYFSSLPSQ----------LPNVTLYVLEGVGHCPHDDRP--DLVHEKLLPWLAQ 356 (360)
T ss_pred HHHHHHhhhcc----------CCceEEEEcCCCCCCccccCH--HHHHHHHHHHHHh
Confidence 3455555543 234688999999998765443 3555678888865
No 96
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.34 E-value=1.1e-11 Score=120.78 Aligned_cols=166 Identities=16% Similarity=0.094 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc---cCC---CCCccc--cc
Q 004766 542 FDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH---KFT---IGHAWV--SD 613 (732)
Q Consensus 542 ~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~---~~~---~~~~~~--~~ 613 (732)
++=|..|++||.++..+++++|+|+|.|.||-+++.+++.+| .++|+|+.+|..-+.... ... ....+. ..
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~ 81 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISK 81 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhh
Confidence 356889999999999999999999999999999999999988 789999988854332111 000 000000 00
Q ss_pred --cCCCCCHHHHHHH-HhcCc-c----cCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchH-HHHHHHHHHHhhcCCCC
Q 004766 614 --FGCSEEEEEFYWL-IKYSP-L----HNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH-SLKLLATMQYVLCTSLE 684 (732)
Q Consensus 614 --~g~p~~~~~~~~~-~~~sp-~----~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~-~~~~~~~l~~~~~~~~~ 684 (732)
+-.+........+ ..... . -.++ +++.|+|+++|.+|...|-.. +..+.++|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE----------~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~------ 145 (213)
T PF08840_consen 82 FSWNEPGLLRSRYAFELADDKAVEEARIPVE----------KIKGPILLISGEDDQIWPSSEMAEQIEERLKAA------ 145 (213)
T ss_dssp -EE-TTS-EE-TT-B--TTTGGGCCCB--GG----------G--SEEEEEEETT-SSS-HHHHHHHHHHHHHCT------
T ss_pred ceecCCcceehhhhhhcccccccccccccHH----------HcCCCEEEEEeCCCCccchHHHHHHHHHHHHHh------
Confidence 0000000000000 00000 0 1122 378899999999999988666 55666778876
Q ss_pred CCCCCC--CEEEEEeCCCCCCCCCch--------------------------HHHHHHHHHHHHHHHHHhCC
Q 004766 685 NSPQTN--PIIGRIERKAGHGVGLPT--------------------------QKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 685 ~~~~~~--~~~~~~~~~~gH~~~~~~--------------------------~~~~~~~~~~~~fl~~~l~~ 728 (732)
+. +++++.|+++||.+..+- ....+.+..+++||.++|+.
T Consensus 146 ----~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~~ 213 (213)
T PF08840_consen 146 ----GFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLGQ 213 (213)
T ss_dssp ----T-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH---
T ss_pred ----CCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 54 488999999999864210 02356788899999999973
No 97
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.34 E-value=8.3e-11 Score=120.54 Aligned_cols=221 Identities=16% Similarity=0.087 Sum_probs=145.6
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCC---CCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCc
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIK---LDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 526 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~---~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g 526 (732)
.-++..++.+|| -.+-.-++.+.+.. .++..|+||++||-.|.+.+ .|-..+...+.++||.+++.|.||-++.-
T Consensus 92 ~y~Reii~~~DG-G~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~-~YVr~lv~~a~~~G~r~VVfN~RG~~g~~ 169 (409)
T KOG1838|consen 92 EYTREIIKTSDG-GTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHE-SYVRHLVHEAQRKGYRVVVFNHRGLGGSK 169 (409)
T ss_pred cceeEEEEeCCC-CEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChh-HHHHHHHHHHHhCCcEEEEECCCCCCCCc
Confidence 345556677788 89988888666532 24678999999999888766 44444445556699999999999955421
Q ss_pred hhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC---CCeeeEEEEcCCcccc--ccc
Q 004766 527 EEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR---PDLFGCALAHVGVMDM--LRY 601 (732)
Q Consensus 527 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~---p~~f~a~v~~~p~~d~--~~~ 601 (732)
-. ..+..-...-+|+.++++++.++-- ..++.++|+|+||.|....+.+. ..+.+|+++..|+--. .+.
T Consensus 170 Lt----Tpr~f~ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~ 243 (409)
T KOG1838|consen 170 LT----TPRLFTAGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRS 243 (409)
T ss_pred cC----CCceeecCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhH
Confidence 10 0111122335899999999988732 24799999999999999999863 4467777777775421 000
Q ss_pred c------------------------c---CCCCCccc-----------------cccCCCCCHHHHHHHHhcCcccCCCC
Q 004766 602 H------------------------K---FTIGHAWV-----------------SDFGCSEEEEEFYWLIKYSPLHNVRR 637 (732)
Q Consensus 602 ~------------------------~---~~~~~~~~-----------------~~~g~p~~~~~~~~~~~~sp~~~~~~ 637 (732)
. . +.....|. ..||-+. .-+++++-|+...+++
T Consensus 244 ~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~---~deYY~~aSs~~~v~~ 320 (409)
T KOG1838|consen 244 IETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKS---VDEYYKKASSSNYVDK 320 (409)
T ss_pred HhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCc---HHHHHhhcchhhhccc
Confidence 0 0 00000000 0122222 2345788899999988
Q ss_pred CCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCC
Q 004766 638 PWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGV 704 (732)
Q Consensus 638 ~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 704 (732)
++.|+|++++.+|+.||.. +.-.-+..+ +.-+.+.+...+||-.
T Consensus 321 ----------I~VP~L~ina~DDPv~p~~-~ip~~~~~~------------np~v~l~~T~~GGHlg 364 (409)
T KOG1838|consen 321 ----------IKVPLLCINAADDPVVPEE-AIPIDDIKS------------NPNVLLVITSHGGHLG 364 (409)
T ss_pred ----------ccccEEEEecCCCCCCCcc-cCCHHHHhc------------CCcEEEEEeCCCceee
Confidence 8999999999999999974 222222221 4568888888899964
No 98
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.34 E-value=4.4e-11 Score=120.13 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=74.4
Q ss_pred cEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHH-HHHHHHcCCCCC
Q 004766 482 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISA-SEYLISAGYTQS 560 (732)
Q Consensus 482 P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~ 560 (732)
|+||++||..+... .|.. ....|+ +||.|+.+|.||.|+.... .......++++... +..+.+. .+.
T Consensus 2 ~~vv~~hG~~~~~~--~~~~-~~~~L~-~~~~v~~~d~~g~G~s~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~ 69 (251)
T TIGR03695 2 PVLVFLHGFLGSGA--DWQA-LIELLG-PHFRCLAIDLPGHGSSQSP------DEIERYDFEEAAQDILATLLDQ--LGI 69 (251)
T ss_pred CEEEEEcCCCCchh--hHHH-HHHHhc-ccCeEEEEcCCCCCCCCCC------CccChhhHHHHHHHHHHHHHHH--cCC
Confidence 78999999876543 3433 345566 8999999999998764221 11123455666655 5555544 245
Q ss_pred CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 561 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
+++.++|+|+||.++..++.++|+.++++|+..|..
T Consensus 70 ~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 70 EPFFLVGYSMGGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred CeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCC
Confidence 789999999999999999999999999998877654
No 99
>PRK06489 hypothetical protein; Provisional
Probab=99.33 E-value=4e-11 Score=127.82 Aligned_cols=109 Identities=17% Similarity=0.103 Sum_probs=70.1
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHH--------HHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHH-H
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTIL--------MRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASE-Y 551 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~--------l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~-~ 551 (732)
.|.||++||+.++...+. .+.+... +. ++|.|+++|+||.|..... ...........+++|+.+.+. .
T Consensus 69 gpplvllHG~~~~~~~~~-~~~~~~~l~~~~~~l~~-~~~~Via~Dl~GhG~S~~p-~~~~~~~~~~~~~~~~a~~~~~~ 145 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFL-SPTFAGELFGPGQPLDA-SKYFIILPDGIGHGKSSKP-SDGLRAAFPRYDYDDMVEAQYRL 145 (360)
T ss_pred CCeEEEeCCCCCchhhhc-cchhHHHhcCCCCcccc-cCCEEEEeCCCCCCCCCCC-CcCCCCCCCcccHHHHHHHHHHH
Confidence 688999999877643321 1222222 24 7899999999998854210 000000011245677775443 3
Q ss_pred HHHcCCCCCCcEE-EEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 552 LISAGYTQSRKLC-IEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 552 l~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
+.+. ..-+++. ++|+|+||++++.++.++|++++++|+..+
T Consensus 146 l~~~--lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s 187 (360)
T PRK06489 146 VTEG--LGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMAS 187 (360)
T ss_pred HHHh--cCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeecc
Confidence 4343 1224664 899999999999999999999999987655
No 100
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.33 E-value=1.8e-10 Score=114.05 Aligned_cols=119 Identities=14% Similarity=0.086 Sum_probs=82.8
Q ss_pred EEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccc
Q 004766 456 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 535 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~ 535 (732)
+.+-+| ++++...-. .+..|+|+++||.+....++.+. ...|+.+||.|+++|.||.|.... ..
T Consensus 26 ~~~~~g-I~~h~~e~g------~~~gP~illlHGfPe~wyswr~q---~~~la~~~~rviA~DlrGyG~Sd~------P~ 89 (322)
T KOG4178|consen 26 FVTYKG-IRLHYVEGG------PGDGPIVLLLHGFPESWYSWRHQ---IPGLASRGYRVIAPDLRGYGFSDA------PP 89 (322)
T ss_pred eEEEcc-EEEEEEeec------CCCCCEEEEEccCCccchhhhhh---hhhhhhcceEEEecCCCCCCCCCC------CC
Confidence 334467 666655442 25689999999999887665554 244666999999999999775311 11
Q ss_pred cCCccHH----HHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEc-CCcc
Q 004766 536 AKKQNCF----DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH-VGVM 596 (732)
Q Consensus 536 ~~~~~~~----~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~-~p~~ 596 (732)
.....++ .|+++.++.| | -+|+.+.||++|++++..++.++|++..+.|+. +|..
T Consensus 90 ~~~~Yt~~~l~~di~~lld~L---g---~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 90 HISEYTIDELVGDIVALLDHL---G---LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred CcceeeHHHHHHHHHHHHHHh---c---cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 1122233 4555555444 3 369999999999999999999999999998764 4444
No 101
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.33 E-value=1.1e-10 Score=125.72 Aligned_cols=108 Identities=14% Similarity=0.010 Sum_probs=69.8
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
+..|+||++||..+.. ..|...+ ..|. ++|.|+++|+||.|...+.-.. ........+.+++.+..+++. .
T Consensus 103 ~~~p~vvllHG~~~~~--~~~~~~~-~~L~-~~~~vi~~D~rG~G~S~~~~~~---~~~~~~~~~~~~~~i~~~~~~--l 173 (402)
T PLN02894 103 EDAPTLVMVHGYGASQ--GFFFRNF-DALA-SRFRVIAIDQLGWGGSSRPDFT---CKSTEETEAWFIDSFEEWRKA--K 173 (402)
T ss_pred CCCCEEEEECCCCcch--hHHHHHH-HHHH-hCCEEEEECCCCCCCCCCCCcc---cccHHHHHHHHHHHHHHHHHH--c
Confidence 4568999999976543 2333333 4466 5799999999998865331100 000011112233333333322 2
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
+.+++.++|||+||++++.++.++|+.++++|+..|.
T Consensus 174 ~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 174 NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 3468999999999999999999999999998877653
No 102
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.32 E-value=3.7e-11 Score=127.60 Aligned_cols=110 Identities=15% Similarity=0.104 Sum_probs=74.4
Q ss_pred CccEEEEEcCCCCccCCCCc--ChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCC
Q 004766 480 SHPCLLYGYGGFNISVTPSF--SVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 557 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~--~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 557 (732)
+.| ||++||-......... ...+...|.++||.|+++|+||.|..... ........+|+.++++++.++.
T Consensus 62 ~~p-vl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~------~~~~d~~~~~~~~~v~~l~~~~- 133 (350)
T TIGR01836 62 KTP-LLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY------LTLDDYINGYIDKCVDYICRTS- 133 (350)
T ss_pred CCc-EEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc------CCHHHHHHHHHHHHHHHHHHHh-
Confidence 345 7888875322111111 12345556669999999999986632110 0111111245778899988763
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccc
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDM 598 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~ 598 (732)
..+++.++|+|+||.+++.++..+|+.++++|+.+|.+|+
T Consensus 134 -~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 134 -KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred -CCCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 3468999999999999999999999999999998887775
No 103
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.32 E-value=3.1e-11 Score=129.79 Aligned_cols=103 Identities=13% Similarity=0.097 Sum_probs=77.2
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
+..|.||++||..+... .|.. ....|. ++|.|+++|+||.|..... .....++++.+.+..+++. .
T Consensus 129 ~~~~~vl~~HG~~~~~~--~~~~-~~~~l~-~~~~v~~~d~~g~G~s~~~--------~~~~~~~~~~~~~~~~~~~--~ 194 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLN--NWLF-NHAALA-AGRPVIALDLPGHGASSKA--------VGAGSLDELAAAVLAFLDA--L 194 (371)
T ss_pred CCCCeEEEECCCCCccc--hHHH-HHHHHh-cCCEEEEEcCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHh--c
Confidence 34688999998766533 2332 234566 6799999999998865321 1234577777777776655 4
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
++.++.++|+|+||+++..++.++|++++++|+..|.
T Consensus 195 ~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 195 GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 5678999999999999999999999999999988765
No 104
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.32 E-value=1.9e-12 Score=127.99 Aligned_cols=186 Identities=16% Similarity=0.096 Sum_probs=114.2
Q ss_pred EEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcE
Q 004766 484 LLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKL 563 (732)
Q Consensus 484 vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i 563 (732)
||++||..+.. ..|.. +...|+ +||.|+++|.||.|.....- .....++++..+.+..+++. ...+++
T Consensus 1 vv~~hG~~~~~--~~~~~-~~~~l~-~~~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~~l~~~l~~--~~~~~~ 68 (228)
T PF12697_consen 1 VVFLHGFGGSS--ESWDP-LAEALA-RGYRVIAFDLPGHGRSDPPP------DYSPYSIEDYAEDLAELLDA--LGIKKV 68 (228)
T ss_dssp EEEE-STTTTG--GGGHH-HHHHHH-TTSEEEEEECTTSTTSSSHS------SGSGGSHHHHHHHHHHHHHH--TTTSSE
T ss_pred eEEECCCCCCH--HHHHH-HHHHHh-CCCEEEEEecCCcccccccc------ccCCcchhhhhhhhhhcccc--cccccc
Confidence 78999987765 34444 445666 89999999999987643211 11234556666665555554 223689
Q ss_pred EEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc---------cCCCC------Cccc-cccC---CCCC-HHH-
Q 004766 564 CIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH---------KFTIG------HAWV-SDFG---CSEE-EEE- 622 (732)
Q Consensus 564 ~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~---------~~~~~------~~~~-~~~g---~p~~-~~~- 622 (732)
.++|+|+||.+++.++.++|++++++|+..|........ ..... ..+. ..+. .... .+.
T Consensus 69 ~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (228)
T PF12697_consen 69 ILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLI 148 (228)
T ss_dssp EEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccc
Confidence 999999999999999999999999999988877432110 00000 0000 0000 0000 000
Q ss_pred -------HHHHH----hcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCC
Q 004766 623 -------FYWLI----KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNP 691 (732)
Q Consensus 623 -------~~~~~----~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 691 (732)
.+.+. ..++...... +..|+|+++|.+|..++.....++.+.+ ..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~pvl~i~g~~D~~~~~~~~~~~~~~~--------------~~ 204 (228)
T PF12697_consen 149 RSSRRALAEYLRSNLWQADLSEALPR----------IKVPVLVIHGEDDPIVPPESAEELADKL--------------PN 204 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHG----------SSSEEEEEEETTSSSSHHHHHHHHHHHS--------------TT
T ss_pred cccccccccccccccccccccccccc----------cCCCeEEeecCCCCCCCHHHHHHHHHHC--------------CC
Confidence 01111 1112223333 6789999999999999865555554443 24
Q ss_pred EEEEEeCCCCCCCC
Q 004766 692 IIGRIERKAGHGVG 705 (732)
Q Consensus 692 ~~~~~~~~~gH~~~ 705 (732)
+++.+++++||...
T Consensus 205 ~~~~~~~~~gH~~~ 218 (228)
T PF12697_consen 205 AELVVIPGAGHFLF 218 (228)
T ss_dssp EEEEEETTSSSTHH
T ss_pred CEEEEECCCCCccH
Confidence 68999999999854
No 105
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.30 E-value=5.6e-11 Score=126.29 Aligned_cols=129 Identities=13% Similarity=0.072 Sum_probs=82.0
Q ss_pred CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCC---------CcChhH---HHHHHhcCcEEEEEcccC--CCCC
Q 004766 460 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP---------SFSVSR---TILMRHLGAVFCIANIRG--GGEY 525 (732)
Q Consensus 460 dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~---------~~~~~~---~~~l~~~G~~v~~~~~rG--~g~~ 525 (732)
+| ++|.+...-+.+. +..|.||++||-.++.... .|...+ ..++. .+|.|+++|+|| +|..
T Consensus 14 ~~-~~~~y~~~g~~~~---~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-~~~~vi~~D~~G~~~g~s 88 (351)
T TIGR01392 14 SD-VRVAYETYGTLNA---ERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDT-DRYFVVCSNVLGGCYGST 88 (351)
T ss_pred CC-ceEEEEeccccCC---CCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCC-CceEEEEecCCCCCCCCC
Confidence 45 5665555533221 2357999999977754221 122211 13334 899999999999 4443
Q ss_pred ch-hHHhcccc---cCCccHHHHHHHHHHHHHHcCCCCCCc-EEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 526 GE-EWHKGGAL---AKKQNCFDDFISASEYLISAGYTQSRK-LCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 526 g~-~~~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
+. .+...+.. .....+++|+.+.+..+++.- ..++ +.++|+|+||+++..++.++|++++++|+..+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (351)
T TIGR01392 89 GPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL--GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161 (351)
T ss_pred CCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccC
Confidence 32 22111110 112356788887776666542 3357 999999999999999999999999988877654
No 106
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.29 E-value=9e-10 Score=108.47 Aligned_cols=285 Identities=16% Similarity=0.116 Sum_probs=153.6
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
-.+-..+|||||++|| .|+...++++||+.|..++-.-... --...++|||||+.|+-.+.++
T Consensus 116 e~Vl~~~fsp~g~~l~-----tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg----------- 179 (480)
T KOG0271|consen 116 EAVLSVQFSPTGSRLV-----TGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDG----------- 179 (480)
T ss_pred CcEEEEEecCCCceEE-----ecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCC-----------
Confidence 4455789999999998 4455589999999987754322111 1247899999999999776443
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEE-----ecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccc
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHV-----TEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG 285 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~-----SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 285 (732)
.|.+|+-.+++.....+ +.+..++..++| .|..++++-.+.+ +.+.++|+..+.
T Consensus 180 --------~I~lwdpktg~~~g~~l---~gH~K~It~Lawep~hl~p~~r~las~skD-----g~vrIWd~~~~~----- 238 (480)
T KOG0271|consen 180 --------SIRLWDPKTGQQIGRAL---RGHKKWITALAWEPLHLVPPCRRLASSSKD-----GSVRIWDTKLGT----- 238 (480)
T ss_pred --------eEEEecCCCCCcccccc---cCcccceeEEeecccccCCCccceecccCC-----CCEEEEEccCce-----
Confidence 58888876654322212 234456777776 4577876654433 336777876532
Q ss_pred ccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEe-------
Q 004766 286 FKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAV------- 358 (732)
Q Consensus 286 ~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~------- 358 (732)
....+. +.-..+.++..-|+-+++....+. ..++|+ ...+...++|-.|. ..+..++++
T Consensus 239 --------~~~~ls-gHT~~VTCvrwGG~gliySgS~Dr-tIkvw~--a~dG~~~r~lkGHa--hwvN~lalsTdy~LRt 304 (480)
T KOG0271|consen 239 --------CVRTLS-GHTASVTCVRWGGEGLIYSGSQDR-TIKVWR--ALDGKLCRELKGHA--HWVNHLALSTDYVLRT 304 (480)
T ss_pred --------EEEEec-cCccceEEEEEcCCceEEecCCCc-eEEEEE--ccchhHHHhhcccc--hheeeeeccchhhhhc
Confidence 122332 222233333334555555554432 334443 33333223332222 222222222
Q ss_pred ------c-----------------------CCEEEEEEecCCeeEEEEEeCCC-CceeeecccccceeeEeecccCCcEE
Q 004766 359 ------N-----------------------LNQMIVSYLSDVKYVLQIRDLKN-GSLLHQLPIEIGSVNAISARREDSVV 408 (732)
Q Consensus 359 ------~-----------------------~~~l~~~~~~~g~~~l~~~d~~~-g~~~~~l~~~~g~v~~~~~s~d~~~l 408 (732)
+ ....+++..++ ..+++|+... .+.+.+.+.+...|..+.+|||+..
T Consensus 305 gaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd--~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~- 381 (480)
T KOG0271|consen 305 GAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDD--FTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRY- 381 (480)
T ss_pred cccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCC--ceEEEecccccccchhhhhchhhheeeEEECCCccE-
Confidence 1 01235666666 4788998642 2334455555666778899999874
Q ss_pred EEEEecCCCCceEEEEECCCCCCceEEEEeecCCCCCCCCceEEEEEEEccCCCeeEEEEEEEcCCC
Q 004766 409 FISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNI 475 (732)
Q Consensus 409 ~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~ 475 (732)
+...||.. .+-.+|..+|+. +..+....-+-+.-....-.++.+..... ..+.+|-+..+.+
T Consensus 382 -IASaSFDk--SVkLW~g~tGk~-lasfRGHv~~VYqvawsaDsRLlVS~SkD-sTLKvw~V~tkKl 443 (480)
T KOG0271|consen 382 -IASASFDK--SVKLWDGRTGKF-LASFRGHVAAVYQVAWSADSRLLVSGSKD-STLKVWDVRTKKL 443 (480)
T ss_pred -EEEeeccc--ceeeeeCCCcch-hhhhhhccceeEEEEeccCccEEEEcCCC-ceEEEEEeeeeee
Confidence 45667765 455667778862 33332110000100011112233333233 5788887776653
No 107
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.28 E-value=1.3e-09 Score=103.41 Aligned_cols=229 Identities=12% Similarity=0.138 Sum_probs=142.1
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
+...++.+..|+||++.. +. +-..++++||+++|+......+. ...-++++|||+++|+-.+
T Consensus 62 HsH~v~dv~~s~dg~~al-S~----swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGS------------ 124 (315)
T KOG0279|consen 62 HSHFVSDVVLSSDGNFAL-SA----SWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGS------------ 124 (315)
T ss_pred cceEecceEEccCCceEE-ec----cccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCC------------
Confidence 456688999999998654 32 33358999999999754322222 2357899999999998654
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCC--CeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEH--PKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~--~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
+...|.+|+.-+. +.++..++ ..|+.-+.|||...-.++.+.. . ...+-++|+.+-+
T Consensus 125 -------rDkTiklwnt~g~-----ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s-~--DktvKvWnl~~~~------ 183 (315)
T KOG0279|consen 125 -------RDKTIKLWNTLGV-----CKYTIHEDSHREWVSCVRFSPNESNPIIVSAS-W--DKTVKVWNLRNCQ------ 183 (315)
T ss_pred -------Ccceeeeeeeccc-----EEEEEecCCCcCcEEEEEEcCCCCCcEEEEcc-C--CceEEEEccCCcc------
Confidence 3446777776433 33332222 5688899999996333333221 1 2347777888732
Q ss_pred cccCCCCCcEEeeeccc--ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEE
Q 004766 287 KKRDGLLPFVKLIDGFD--AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMI 364 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~--~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~ 364 (732)
.+...-+.. ..+..+||||..+.. ++..++++++|++.+++...+ +....+.++.++++.+.+
T Consensus 184 --------l~~~~~gh~~~v~t~~vSpDGslcas----Ggkdg~~~LwdL~~~k~lysl---~a~~~v~sl~fspnrywL 248 (315)
T KOG0279|consen 184 --------LRTTFIGHSGYVNTVTVSPDGSLCAS----GGKDGEAMLWDLNEGKNLYSL---EAFDIVNSLCFSPNRYWL 248 (315)
T ss_pred --------hhhccccccccEEEEEECCCCCEEec----CCCCceEEEEEccCCceeEec---cCCCeEeeEEecCCceeE
Confidence 111111111 123358999986553 455678999999988743333 224678889999844444
Q ss_pred EEEecCCeeEEEEEeCCCCceeeecccc-cce--------eeEeecccCCcEEEEEEec
Q 004766 365 VSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGS--------VNAISARREDSVVFISFTS 414 (732)
Q Consensus 365 ~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~--------v~~~~~s~d~~~l~~~~ss 414 (732)
..... ..|.+||++++..+..+.+. .+. .-+++++.||.+|+.-+++
T Consensus 249 ~~at~---~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td 304 (315)
T KOG0279|consen 249 CAATA---TSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTD 304 (315)
T ss_pred eeccC---CceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecC
Confidence 33333 34999999987765655543 111 2245677888888766655
No 108
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.28 E-value=9.3e-11 Score=125.64 Aligned_cols=113 Identities=18% Similarity=0.140 Sum_probs=74.2
Q ss_pred CccEEEEEcCCCCccCCCC-----------cChhH---HHHHHhcCcEEEEEcccCC--CCCchhHHhc--cc---ccCC
Q 004766 480 SHPCLLYGYGGFNISVTPS-----------FSVSR---TILMRHLGAVFCIANIRGG--GEYGEEWHKG--GA---LAKK 538 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~-----------~~~~~---~~~l~~~G~~v~~~~~rG~--g~~g~~~~~~--~~---~~~~ 538 (732)
..|.||++||..++..... |...+ ..++. .+|.|+++|.+|+ |..+...... +. ....
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~ 125 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDT-DRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFP 125 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCc-cceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCC
Confidence 3689999999887654211 22211 12334 7999999999983 2222211100 00 0011
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCc-EEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 539 QNCFDDFISASEYLISAGYTQSRK-LCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
..+++|+.+.+..+++. ...++ ..++|+||||.++..++.++|++++++|+..+.
T Consensus 126 ~~~~~~~~~~~~~~l~~--l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 181 (379)
T PRK00175 126 VITIRDWVRAQARLLDA--LGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASS 181 (379)
T ss_pred cCCHHHHHHHHHHHHHH--hCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCC
Confidence 35678888877777665 23356 489999999999999999999999999887653
No 109
>PLN02578 hydrolase
Probab=99.26 E-value=3.9e-10 Score=119.87 Aligned_cols=96 Identities=10% Similarity=-0.025 Sum_probs=66.6
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHH----HHHHHHHHHHHHcC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCF----DDFISASEYLISAG 556 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~----~D~~~~~~~l~~~~ 556 (732)
.|.||++||..+.. ..|.. ....|+ ++|.|+++|+||.|....... ..+. +|+.+.++.+.
T Consensus 86 g~~vvliHG~~~~~--~~w~~-~~~~l~-~~~~v~~~D~~G~G~S~~~~~--------~~~~~~~a~~l~~~i~~~~--- 150 (354)
T PLN02578 86 GLPIVLIHGFGASA--FHWRY-NIPELA-KKYKVYALDLLGFGWSDKALI--------EYDAMVWRDQVADFVKEVV--- 150 (354)
T ss_pred CCeEEEECCCCCCH--HHHHH-HHHHHh-cCCEEEEECCCCCCCCCCccc--------ccCHHHHHHHHHHHHHHhc---
Confidence 36689999976643 22332 234566 789999999999887543211 1122 34444444332
Q ss_pred CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 557 YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 557 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
.+++.++|+|+||+++..++.++|++++++|+..+
T Consensus 151 ---~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~ 185 (354)
T PLN02578 151 ---KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185 (354)
T ss_pred ---cCCeEEEEECHHHHHHHHHHHhChHhcceEEEECC
Confidence 35799999999999999999999999999987654
No 110
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.25 E-value=2e-10 Score=117.22 Aligned_cols=196 Identities=16% Similarity=0.110 Sum_probs=126.9
Q ss_pred HHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHH-cCCCCCCcEEEEecChhHHHHHHHHhh
Q 004766 503 RTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLIS-AGYTQSRKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 503 ~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~~i~i~G~S~GG~l~~~~~~~ 581 (732)
+..||+ +||+|+++||-|-|. .|.. ........-|.+.|++.+.. .+.....+++++|+|.||.-+++++..
T Consensus 19 l~~~L~-~GyaVv~pDY~Glg~---~y~~---~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 19 LAAWLA-RGYAVVAPDYEGLGT---PYLN---GRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHH-CCCEEEecCCCCCCC---cccC---cHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 356777 999999999998765 2211 11223445666666666655 355455799999999999999888754
Q ss_pred ----CCCe---eeEEEEcCCcccccccccCCCCCccc-----------ccc----------CCCC---------------
Q 004766 582 ----RPDL---FGCALAHVGVMDMLRYHKFTIGHAWV-----------SDF----------GCSE--------------- 618 (732)
Q Consensus 582 ----~p~~---f~a~v~~~p~~d~~~~~~~~~~~~~~-----------~~~----------g~p~--------------- 618 (732)
.||+ +.++++..|..|+..+.....+..+. ..| .++.
T Consensus 92 ~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~ 171 (290)
T PF03583_consen 92 APSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLAD 171 (290)
T ss_pred hHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHH
Confidence 4776 78899999988875443211110000 000 0000
Q ss_pred --------------------------CHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHH
Q 004766 619 --------------------------EEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLL 672 (732)
Q Consensus 619 --------------------------~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~ 672 (732)
++...+.+.+.+. ... .......|+||.||.+|..||+....+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~~-------~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~ 242 (290)
T PF03583_consen 172 IVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSL--GMG-------GDWTPTVPVLIYQGTADEVVPPADTDALV 242 (290)
T ss_pred HHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhc--ccc-------CCCCCCCCEEEEecCCCCCCChHHHHHHH
Confidence 0111111111111 000 01135679999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCC-CCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC
Q 004766 673 ATMQYVLCTSLENSPQT-NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 673 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
+++++. | .+++++.++..+|.... .......+.||...+...
T Consensus 243 ~~~c~~----------G~a~V~~~~~~~~~H~~~~-----~~~~~~a~~Wl~~rf~G~ 285 (290)
T PF03583_consen 243 AKWCAA----------GGADVEYVRYPGGGHLGAA-----FASAPDALAWLDDRFAGK 285 (290)
T ss_pred HHHHHc----------CCCCEEEEecCCCChhhhh-----hcCcHHHHHHHHHHHCCC
Confidence 999998 8 89999999999997532 223345678998887554
No 111
>PRK07581 hypothetical protein; Validated
Probab=99.25 E-value=6.9e-11 Score=125.17 Aligned_cols=112 Identities=15% Similarity=0.116 Sum_probs=66.4
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccc---cCCccHH-HHHHHHHHHHHH-
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL---AKKQNCF-DDFISASEYLIS- 554 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~---~~~~~~~-~D~~~~~~~l~~- 554 (732)
..|+||+.||..+....+.+.......|...+|.|+++|.||.|............ .....++ +|+.+....|.+
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 119 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK 119 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 44677777766544332222100001344479999999999988643221100000 0001123 444443444544
Q ss_pred cCCCCCCcE-EEEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 555 AGYTQSRKL-CIEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 555 ~~~~d~~~i-~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
.+. +++ .++|+|+||+++..++.++|++++++|+.++
T Consensus 120 lgi---~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~ 157 (339)
T PRK07581 120 FGI---ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAG 157 (339)
T ss_pred hCC---CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeec
Confidence 343 574 7899999999999999999999999887644
No 112
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.25 E-value=6.6e-10 Score=118.61 Aligned_cols=204 Identities=17% Similarity=0.153 Sum_probs=127.1
Q ss_pred EEEEEEEcc-CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcC----cEEEEEcccCCCCC
Q 004766 451 VHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLG----AVFCIANIRGGGEY 525 (732)
Q Consensus 451 ~~~~~~~s~-dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G----~~v~~~~~rG~g~~ 525 (732)
.+.+.+.|. -| .+..++++.|+++. .+++|+|++.||.........+ ..+..+++ +| .+++++|...+...
T Consensus 180 ~~~~~~~S~~Lg-~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~~~~~~~-~~ld~li~-~g~i~P~ivV~id~~~~~~R 255 (411)
T PRK10439 180 AKEIIWKSERLG-NSRRVWIYTTGDAA-PEERPLAILLDGQFWAESMPVW-PALDSLTH-RGQLPPAVYLLIDAIDTTHR 255 (411)
T ss_pred eEEEEEEccccC-CceEEEEEECCCCC-CCCCCEEEEEECHHhhhcCCHH-HHHHHHHH-cCCCCceEEEEECCCCcccc
Confidence 344555553 56 78899999998875 5689999999998654322221 22234444 66 45677876322211
Q ss_pred chhHHhcccccCCccHHHHHH--HHHHHHHHc--CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccc
Q 004766 526 GEEWHKGGALAKKQNCFDDFI--SASEYLISA--GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY 601 (732)
Q Consensus 526 g~~~~~~~~~~~~~~~~~D~~--~~~~~l~~~--~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~ 601 (732)
..+ ......|.+++ ..+-++.++ -..|+++.+|.|.||||+.++.++.++|++|.++++.+|.+=+.
T Consensus 256 ~~e-------l~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~-- 326 (411)
T PRK10439 256 SQE-------LPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWP-- 326 (411)
T ss_pred ccc-------CCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecC--
Confidence 111 01112344333 233444443 23588999999999999999999999999999999999853110
Q ss_pred ccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcC
Q 004766 602 HKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCT 681 (732)
Q Consensus 602 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~ 681 (732)
...+ .......+.+.+. .... ....++|.+|..|... +....++++.|+++
T Consensus 327 ----------~~~~-~~~~~l~~~l~~~----~~~~----------~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~--- 377 (411)
T PRK10439 327 ----------HRGG-QQEGVLLEQLKAG----EVSA----------RGLRIVLEAGRREPMI-MRANQALYAQLHPA--- 377 (411)
T ss_pred ----------CccC-CchhHHHHHHHhc----ccCC----------CCceEEEeCCCCCchH-HHHHHHHHHHHHHC---
Confidence 0001 0111111222221 0111 2346899999988543 56789999999998
Q ss_pred CCCCCCCCCCEEEEEeCCCCCCC
Q 004766 682 SLENSPQTNPIIGRIERKAGHGV 704 (732)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~gH~~ 704 (732)
|.++.+.++++ ||..
T Consensus 378 -------G~~~~~~~~~G-GHd~ 392 (411)
T PRK10439 378 -------GHSVFWRQVDG-GHDA 392 (411)
T ss_pred -------CCcEEEEECCC-CcCH
Confidence 99999999986 7954
No 113
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.24 E-value=2.4e-08 Score=102.52 Aligned_cols=251 Identities=15% Similarity=0.177 Sum_probs=151.6
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc-eeccccc--ceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI-VEADALS--WFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~-~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
+...+.-.++||.|-||| .|+...+++|||....+ .|..... ......++|++||++|+.+-....
T Consensus 58 H~~~vtVAkySPsG~yiA-----SGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGre------ 126 (603)
T KOG0318|consen 58 HAHQVTVAKYSPSGFYIA-----SGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRE------ 126 (603)
T ss_pred ccceeEEEEeCCCceEEe-----ecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCcc------
Confidence 345667788999999888 55666789999986644 3332221 113478999999999998753221
Q ss_pred CCCCcccCCcccEEEEEECCCC---------------------------CCC-CeEEEecC---------CCCeeEEEeE
Q 004766 207 DAGTETDSNLYHEFYYHFLGTK---------------------------QSE-DILCWKDP---------EHPKYIFSGH 249 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~---------------------------~~~-~~~v~~~~---------~~~~~~~~~~ 249 (732)
+...++.|+-|+. ... -+.+|++| ++..|+..+.
T Consensus 127 ---------rfg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VR 197 (603)
T KOG0318|consen 127 ---------RFGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVR 197 (603)
T ss_pred ---------ceeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEE
Confidence 1112223322221 111 13345543 2345677899
Q ss_pred EecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee--cccc-eEE-EEEecCCeEEEEeCCCCC
Q 004766 250 VTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID--GFDA-QYE-VIANDDTVFTFLTNKDAP 325 (732)
Q Consensus 250 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~-~~~-~~s~dg~~l~~~s~~~~~ 325 (732)
+||||...+-.+.+ ..++++|-.+++ ..-.+-. .... .+. .|+||+.+++-.+...
T Consensus 198 ysPDG~~Fat~gsD-----gki~iyDGktge-------------~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDk-- 257 (603)
T KOG0318|consen 198 YSPDGSRFATAGSD-----GKIYIYDGKTGE-------------KVGELEDSDAHKGSIFALSWSPDSTQFLTVSADK-- 257 (603)
T ss_pred ECCCCCeEEEecCC-----ccEEEEcCCCcc-------------EEEEecCCCCccccEEEEEECCCCceEEEecCCc--
Confidence 99999998766544 348899876653 1222221 1112 232 5999999988655432
Q ss_pred CceEEEEeCCCCCCceEeccCC-CCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccC
Q 004766 326 KYKIIRVDLKEPNDWFEVIPEA-ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARRE 404 (732)
Q Consensus 326 ~~~l~~~d~~~~~~~~~l~~~~-~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d 404 (732)
.+-.+|+.+....+++.-.. -+..+-+..|.+ ++|+...... .|-.++++++..++.+..+.-.+..++.++|
T Consensus 258 --t~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqk-d~lItVSl~G---~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d 331 (603)
T KOG0318|consen 258 --TIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQK-DHLITVSLSG---TINYLNPSDPSVLKVISGHNKSITALTVSPD 331 (603)
T ss_pred --eEEEEEeeccceEEEeecCCchhceEEEEEEeC-CeEEEEEcCc---EEEEecccCCChhheecccccceeEEEEcCC
Confidence 34455666655334433222 123444667776 6766555443 5777788777766666666778888999999
Q ss_pred CcEEEEEEecCCCCceEEEEECCCCC
Q 004766 405 DSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 405 ~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+++++ +. .--+.+-.++..+|.
T Consensus 332 ~~~i~-Sg---syDG~I~~W~~~~g~ 353 (603)
T KOG0318|consen 332 GKTIY-SG---SYDGHINSWDSGSGT 353 (603)
T ss_pred CCEEE-ee---ccCceEEEEecCCcc
Confidence 97554 33 234678888887764
No 114
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.24 E-value=2.2e-10 Score=116.20 Aligned_cols=94 Identities=13% Similarity=0.054 Sum_probs=67.5
Q ss_pred cEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCC
Q 004766 482 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSR 561 (732)
Q Consensus 482 P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 561 (732)
|.||++||..+.+ ..|.. ....|. ..|.|+++|.||.|.... ....+++++.. .+.+. ..+
T Consensus 14 ~~ivllHG~~~~~--~~w~~-~~~~L~-~~~~vi~~Dl~G~G~S~~---------~~~~~~~~~~~---~l~~~---~~~ 74 (256)
T PRK10349 14 VHLVLLHGWGLNA--EVWRC-IDEELS-SHFTLHLVDLPGFGRSRG---------FGALSLADMAE---AVLQQ---APD 74 (256)
T ss_pred CeEEEECCCCCCh--hHHHH-HHHHHh-cCCEEEEecCCCCCCCCC---------CCCCCHHHHHH---HHHhc---CCC
Confidence 5699999976553 24544 445566 679999999999885421 11234455444 34433 246
Q ss_pred cEEEEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 562 KLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 562 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
++.++|+|+||+++..++.++|++++.+|+..+
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~ 107 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVAS 107 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecC
Confidence 899999999999999999999999999987655
No 115
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.22 E-value=4.5e-10 Score=102.75 Aligned_cols=199 Identities=16% Similarity=0.116 Sum_probs=132.5
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCC
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 557 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 557 (732)
.+..-++|++||.- +.-...+....+..+++.|+.++.+|++|-|+.-..++-. +.....+|+-.+++++.....
T Consensus 30 tgs~e~vvlcHGfr-S~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~G----n~~~eadDL~sV~q~~s~~nr 104 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFR-SHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYG----NYNTEADDLHSVIQYFSNSNR 104 (269)
T ss_pred cCCceEEEEeeccc-cccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccC----cccchHHHHHHHHHHhccCce
Confidence 36678999999953 3323344455677888899999999999999876666532 222345999999999876432
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCC---ccccccC------------CCCCHHH
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGH---AWVSDFG------------CSEEEEE 622 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~---~~~~~~g------------~p~~~~~ 622 (732)
+ --+|.|||-||..+...+..+++ ..-+|..+|-.|.........++ .|..+-| .-..++.
T Consensus 105 ~---v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eS 180 (269)
T KOG4667|consen 105 V---VPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEES 180 (269)
T ss_pred E---EEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHHH
Confidence 2 34789999999999999999877 55566666766665544212221 1222211 1111221
Q ss_pred HHH-HH-hcCcc-cCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCC
Q 004766 623 FYW-LI-KYSPL-HNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERK 699 (732)
Q Consensus 623 ~~~-~~-~~sp~-~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 699 (732)
... +. ..+|. ..++ ..+|+|-+||..|..||.+.+.+|++.+. + ..|.+.++
T Consensus 181 lmdrLntd~h~aclkId-----------~~C~VLTvhGs~D~IVPve~AkefAk~i~------------n--H~L~iIEg 235 (269)
T KOG4667|consen 181 LMDRLNTDIHEACLKID-----------KQCRVLTVHGSEDEIVPVEDAKEFAKIIP------------N--HKLEIIEG 235 (269)
T ss_pred HHHHHhchhhhhhcCcC-----------ccCceEEEeccCCceeechhHHHHHHhcc------------C--CceEEecC
Confidence 111 10 01111 1122 57999999999999999999999988776 3 47888899
Q ss_pred CCCCCCCchHH
Q 004766 700 AGHGVGLPTQK 710 (732)
Q Consensus 700 ~gH~~~~~~~~ 710 (732)
+.|.+...+.+
T Consensus 236 ADHnyt~~q~~ 246 (269)
T KOG4667|consen 236 ADHNYTGHQSQ 246 (269)
T ss_pred CCcCccchhhh
Confidence 99999775543
No 116
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.21 E-value=1.9e-10 Score=121.75 Aligned_cols=74 Identities=15% Similarity=0.047 Sum_probs=53.0
Q ss_pred cCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCc-EEEEecChhHHHHHHHHhhCCCeeeE
Q 004766 510 LGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRK-LCIEGGSNGGLLVGACINQRPDLFGC 588 (732)
Q Consensus 510 ~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~~f~a 588 (732)
.+|.|+++|.||.|+... ....++|+.+.+..+++. ..-++ +.++|+||||+++..++.++|+++++
T Consensus 98 ~~~~Vi~~Dl~G~g~s~~----------~~~~~~~~a~dl~~ll~~--l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~ 165 (343)
T PRK08775 98 ARFRLLAFDFIGADGSLD----------VPIDTADQADAIALLLDA--LGIARLHAFVGYSYGALVGLQFASRHPARVRT 165 (343)
T ss_pred cccEEEEEeCCCCCCCCC----------CCCCHHHHHHHHHHHHHH--cCCCcceEEEEECHHHHHHHHHHHHChHhhhe
Confidence 689999999999764311 112344555544444443 12234 57999999999999999999999999
Q ss_pred EEEcCCc
Q 004766 589 ALAHVGV 595 (732)
Q Consensus 589 ~v~~~p~ 595 (732)
+|+..+.
T Consensus 166 LvLi~s~ 172 (343)
T PRK08775 166 LVVVSGA 172 (343)
T ss_pred EEEECcc
Confidence 9887664
No 117
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.20 E-value=5.4e-08 Score=100.92 Aligned_cols=243 Identities=12% Similarity=0.013 Sum_probs=142.8
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
..+.|||||+.++.+... ...|++||+.+++.+...........++|+|||+.++.+..
T Consensus 34 ~~l~~~~dg~~l~~~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~----------------- 92 (300)
T TIGR03866 34 RGITLSKDGKLLYVCASD----SDTIQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANE----------------- 92 (300)
T ss_pred CceEECCCCCEEEEEECC----CCeEEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcC-----------------
Confidence 368899999987555321 24799999999886532211112356899999998776532
Q ss_pred CcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCC
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLP 294 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 294 (732)
....|+++++.+.. .+..+.... ....+.++|||+++++..... ..++.+|..++. .
T Consensus 93 -~~~~l~~~d~~~~~--~~~~~~~~~---~~~~~~~~~dg~~l~~~~~~~----~~~~~~d~~~~~-------------~ 149 (300)
T TIGR03866 93 -DDNLVTVIDIETRK--VLAEIPVGV---EPEGMAVSPDGKIVVNTSETT----NMAHFIDTKTYE-------------I 149 (300)
T ss_pred -CCCeEEEEECCCCe--EEeEeeCCC---CcceEEECCCCCEEEEEecCC----CeEEEEeCCCCe-------------E
Confidence 22368889987642 112222111 124689999999988765321 235566776532 0
Q ss_pred cEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC-----CCCceeEEEEecCC-EEEEEEe
Q 004766 295 FVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-----ERDVLESATAVNLN-QMIVSYL 368 (732)
Q Consensus 295 ~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~-----~~~~l~~~~~~~~~-~l~~~~~ 368 (732)
...+..+.......|+++|+.|++.+.. ...|..+|+++++....+..+. ......++.+++++ .+++...
T Consensus 150 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~---~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~ 226 (300)
T TIGR03866 150 VDNVLVDQRPRFAEFTADGKELWVSSEI---GGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALG 226 (300)
T ss_pred EEEEEcCCCccEEEECCCCCEEEEEcCC---CCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcC
Confidence 1111112222234589999888765433 2468889988765223222111 01122346667654 4454443
Q ss_pred cCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.+ .+|.+||+.+++....+.. ...+..++++++++.++.+. ..-..+.++|+.+++
T Consensus 227 ~~--~~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~---~~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 227 PA--NRVAVVDAKTYEVLDYLLV-GQRVWQLAFTPDEKYLLTTN---GVSNDVSVIDVAALK 282 (300)
T ss_pred CC--CeEEEEECCCCcEEEEEEe-CCCcceEEECCCCCEEEEEc---CCCCeEEEEECCCCc
Confidence 33 4689999987776444432 23455778899998776432 123479999998875
No 118
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.20 E-value=2.3e-11 Score=122.96 Aligned_cols=137 Identities=17% Similarity=0.218 Sum_probs=92.7
Q ss_pred CCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcC----cEEEEEcccCCCCCchhHHhc----
Q 004766 461 GSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLG----AVFCIANIRGGGEYGEEWHKG---- 532 (732)
Q Consensus 461 G~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G----~~v~~~~~rG~g~~g~~~~~~---- 532 (732)
| ..+.++++.|+++...+++|+|++.||................+++ .| .++++++.-+.+.....|+..
T Consensus 5 g-~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~-~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~ 82 (251)
T PF00756_consen 5 G-RDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIA-EGKIPPMIIVVIPNGDNSRFYTSWYLPAGSS 82 (251)
T ss_dssp T-EEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHH-HHTSEEEEEEEEESSSTSSTTSBTTSSBCTT
T ss_pred C-CeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHH-hCCCCceEEEEEecccccccccccccccccc
Confidence 5 6889999999998778999999999995110000011111223344 44 455555554444333334421
Q ss_pred --ccccCCccHHHHHH--HHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccc
Q 004766 533 --GALAKKQNCFDDFI--SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDML 599 (732)
Q Consensus 533 --~~~~~~~~~~~D~~--~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~ 599 (732)
.....+...+.+++ +.+.++.++--+++++.+|+|+|+||+.++.++.++|++|.++++.+|.++..
T Consensus 83 ~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 83 RRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp CBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred cccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 12223334566666 46777777766777779999999999999999999999999999999987764
No 119
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.20 E-value=6.7e-10 Score=110.33 Aligned_cols=232 Identities=20% Similarity=0.185 Sum_probs=144.6
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccccc--ceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALS--WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
+...+..+.||||.++|.-. +-+| .+++||+.+|+.+..-.. +...++.+|-|||.+++..+.
T Consensus 268 h~~~V~yi~wSPDdryLlaC---g~~e--~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~---------- 332 (519)
T KOG0293|consen 268 HSQPVSYIMWSPDDRYLLAC---GFDE--VLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSP---------- 332 (519)
T ss_pred ccCceEEEEECCCCCeEEec---CchH--heeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCC----------
Confidence 34567889999999998744 2233 499999999985432211 223478999999999776532
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
...++.|+++.... --++....+ -+..++.++||++++....+ .++.+++.++..+
T Consensus 333 ---------dr~i~~wdlDgn~~---~~W~gvr~~-~v~dlait~Dgk~vl~v~~d-----~~i~l~~~e~~~d------ 388 (519)
T KOG0293|consen 333 ---------DRTIIMWDLDGNIL---GNWEGVRDP-KVHDLAITYDGKYVLLVTVD-----KKIRLYNREARVD------ 388 (519)
T ss_pred ---------CCcEEEecCCcchh---hcccccccc-eeEEEEEcCCCcEEEEEecc-----cceeeechhhhhh------
Confidence 24578888865421 123332222 35689999999999877632 4577777765321
Q ss_pred ccCCCCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCEEEE
Q 004766 288 KRDGLLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQMIV 365 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~l~~ 365 (732)
+.+......... .+|.||+. ++.|.. ...+..+|++...-.+....+.....+-.-.+.. ++.+++
T Consensus 389 --------r~lise~~~its~~iS~d~k~--~LvnL~--~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fia 456 (519)
T KOG0293|consen 389 --------RGLISEEQPITSFSISKDGKL--ALVNLQ--DQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIA 456 (519)
T ss_pred --------hccccccCceeEEEEcCCCcE--EEEEcc--cCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEE
Confidence 112222222222 35666653 334432 3357888887544222333333222222222222 257888
Q ss_pred EEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEec
Q 004766 366 SYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTS 414 (732)
Q Consensus 366 ~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss 414 (732)
+.++| ++||+|+..+|+.+..|+.+...|..++++|...+++.+.+.
T Consensus 457 SGSED--~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasD 503 (519)
T KOG0293|consen 457 SGSED--SKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASD 503 (519)
T ss_pred ecCCC--ceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCC
Confidence 88888 689999999999888888778888888998888777655443
No 120
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.18 E-value=1.9e-10 Score=106.51 Aligned_cols=185 Identities=16% Similarity=0.180 Sum_probs=128.3
Q ss_pred cEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCC----CCC----chhHHhcccccCCccHHHHHHHHHHHHH
Q 004766 482 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGG----GEY----GEEWHKGGALAKKQNCFDDFISASEYLI 553 (732)
Q Consensus 482 P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~----g~~----g~~~~~~~~~~~~~~~~~D~~~~~~~l~ 553 (732)
-+||.+---||.+.. . -...+..++..||.|++||+-.| .+. -+.|.+ +......+.|+.+.++||.
T Consensus 40 ~~li~i~DvfG~~~~-n-~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~---~~~~~~~~~~i~~v~k~lk 114 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFP-N-TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMK---GHSPPKIWKDITAVVKWLK 114 (242)
T ss_pred eEEEEEEeeeccccH-H-HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHh---cCCcccchhHHHHHHHHHH
Confidence 355555554554221 0 11234556668999999998554 111 122443 3344567899999999999
Q ss_pred HcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCccc
Q 004766 554 SAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLH 633 (732)
Q Consensus 554 ~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~ 633 (732)
.+| ++.+||++|+++||-++..+....| +|.|+|+..|.. .+.++.
T Consensus 115 ~~g--~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~---------------------~d~~D~---------- 160 (242)
T KOG3043|consen 115 NHG--DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF---------------------VDSADI---------- 160 (242)
T ss_pred HcC--CcceeeEEEEeecceEEEEeeccch-hheeeeEecCCc---------------------CChhHH----------
Confidence 775 4679999999999998888888766 899998766621 121111
Q ss_pred CCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCC-------
Q 004766 634 NVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGL------- 706 (732)
Q Consensus 634 ~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~------- 706 (732)
. .++.|+|++.|+.|..||+.....+-++|... . ....++.+|++.+||+..
T Consensus 161 --~----------~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~-------~--~~~~~v~~f~g~~HGf~~~r~~~~~ 219 (242)
T KOG3043|consen 161 --A----------NVKAPILFLFAELDEDVPPKDVKAWEEKLKEN-------P--AVGSQVKTFSGVGHGFVARRANISS 219 (242)
T ss_pred --h----------cCCCCEEEEeecccccCCHHHHHHHHHHHhcC-------c--ccceeEEEcCCccchhhhhccCCCC
Confidence 1 15679999999999999999999998888865 1 222689999999999862
Q ss_pred chHH--HHHHHHHHHHHHHHHh
Q 004766 707 PTQK--MIDEAADRYGFMAKML 726 (732)
Q Consensus 707 ~~~~--~~~~~~~~~~fl~~~l 726 (732)
|+.+ .-+.+++++.||.++|
T Consensus 220 Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 220 PEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred hhHHHHHHHHHHHHHHHHHHhh
Confidence 3222 2356677889998876
No 121
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.18 E-value=3e-09 Score=104.84 Aligned_cols=258 Identities=15% Similarity=0.074 Sum_probs=142.9
Q ss_pred eEEeCCCCcCCC-----CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccce--eeeeEEEEe---
Q 004766 118 KVLLDPNTLSDD-----GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWF--KFSSIAWTH--- 187 (732)
Q Consensus 118 ~~l~D~~~l~~~-----~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~--~~~~~~Wsp--- 187 (732)
-.|.|+++.++- +..-+..++|||||++|| .|....+|.+||.++|+.+-.++.+- .+.+++|-|
T Consensus 139 vR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iA-----SG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl 213 (480)
T KOG0271|consen 139 VRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIA-----SGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHL 213 (480)
T ss_pred EEeeccCCCCcceeecCCccEEEEEEECCCcchhh-----ccccCCeEEEecCCCCCcccccccCcccceeEEeeccccc
Confidence 346688766543 344577899999999999 55556789999999988653332211 136778854
Q ss_pred --CCcEEEEEEecCCCCCC---------------------CCC-CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCe
Q 004766 188 --DSKGFFYSRYPAPKEGK---------------------DMD-AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPK 243 (732)
Q Consensus 188 --Dg~~l~y~~~~~~~~~~---------------------~~~-~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~ 243 (732)
..+.|+-.+.++.-... .|+ .+-.........|.+|+...+.- +-+...+..
T Consensus 214 ~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~----~r~lkGHah 289 (480)
T KOG0271|consen 214 VPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKL----CRELKGHAH 289 (480)
T ss_pred CCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhH----HHhhcccch
Confidence 45555544433311000 111 11112222333444444433210 000011122
Q ss_pred eEEEeEEe-----------cCCcE-------------------------EEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 244 YIFSGHVT-----------EDGQY-------------------------LVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 244 ~~~~~~~S-----------pDg~~-------------------------l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
++..++.| |-|++ |+ +.++ ...+++++....
T Consensus 290 wvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlV-SgsD----d~tlflW~p~~~-------- 356 (480)
T KOG0271|consen 290 WVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLV-SGSD----DFTLFLWNPFKS-------- 356 (480)
T ss_pred heeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeE-EecC----CceEEEeccccc--------
Confidence 23233322 33333 32 2221 245777764321
Q ss_pred ccCCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEE
Q 004766 288 KRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVS 366 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~ 366 (732)
.+|..+++..-.. ....||||++.++-.+-+ ..+-+++..+++-...+-.|- ..+..+.|+.|.+|+++
T Consensus 357 ----kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFD----kSVkLW~g~tGk~lasfRGHv--~~VYqvawsaDsRLlVS 426 (480)
T KOG0271|consen 357 ----KKPITRMTGHQALVNHVSFSPDGRYIASASFD----KSVKLWDGRTGKFLASFRGHV--AAVYQVAWSADSRLLVS 426 (480)
T ss_pred ----ccchhhhhchhhheeeEEECCCccEEEEeecc----cceeeeeCCCcchhhhhhhcc--ceeEEEEeccCccEEEE
Confidence 2234444432221 123599999876643332 246666777776333333332 45778999988899999
Q ss_pred EecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEE
Q 004766 367 YLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVF 409 (732)
Q Consensus 367 ~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~ 409 (732)
.+.| +.|.+|++.+.+....|+.+...|..+.++|||..+.
T Consensus 427 ~SkD--sTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~ 467 (480)
T KOG0271|consen 427 GSKD--STLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVA 467 (480)
T ss_pred cCCC--ceEEEEEeeeeeecccCCCCCceEEEEEecCCCceee
Confidence 9988 6899999986665556665566788899999998653
No 122
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=99.17 E-value=3.8e-08 Score=100.69 Aligned_cols=304 Identities=12% Similarity=0.125 Sum_probs=151.5
Q ss_pred EeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC
Q 004766 88 KRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED 167 (732)
Q Consensus 88 ~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~ 167 (732)
.+|.++.|.....+. ..||..+..+++.++|+|...-. . .+..+||+.+.|.|..+ + .+|+.+||+|
T Consensus 45 ~dG~kllF~s~~dg~--~nly~lDL~t~~i~QLTdg~g~~---~---~g~~~s~~~~~~~Yv~~--~---~~l~~vdL~T 111 (386)
T PF14583_consen 45 DDGRKLLFASDFDGN--RNLYLLDLATGEITQLTDGPGDN---T---FGGFLSPDDRALYYVKN--G---RSLRRVDLDT 111 (386)
T ss_dssp TTS-EEEEEE-TTSS---EEEEEETTT-EEEE---SS-B----T---TT-EE-TTSSEEEEEET--T---TEEEEEETTT
T ss_pred CCCCEEEEEeccCCC--cceEEEEcccCEEEECccCCCCC---c---cceEEecCCCeEEEEEC--C---CeEEEEECCc
Confidence 357777776654433 44899998888888888853211 0 14578999999999862 2 3789999999
Q ss_pred Cceec--ccccceeeeeEEEEe--CCcEEEEEEecCCCCC--CCCCC-CCcccCCcccEEEEEECCCCCCCCeEEEecCC
Q 004766 168 QIVEA--DALSWFKFSSIAWTH--DSKGFFYSRYPAPKEG--KDMDA-GTETDSNLYHEFYYHFLGTKQSEDILCWKDPE 240 (732)
Q Consensus 168 g~~~~--~~~~~~~~~~~~Wsp--Dg~~l~y~~~~~~~~~--~~~~~-~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~ 240 (732)
++... +..+.. .....|+. |++.++.+.....+.. .++.. .......-.++|+..++.+++. ..|+++..
T Consensus 112 ~e~~~vy~~p~~~-~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~--~~v~~~~~ 188 (386)
T PF14583_consen 112 LEERVVYEVPDDW-KGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGER--KVVFEDTD 188 (386)
T ss_dssp --EEEEEE--TTE-EEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--E--EEEEEESS
T ss_pred CcEEEEEECCccc-ccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCce--eEEEecCc
Confidence 87422 111211 23467753 5677666653221100 00000 0001133456899999998754 47776643
Q ss_pred CCeeEEEeEEec-CCcEEEEEEecCCcc-eEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEE
Q 004766 241 HPKYIFSGHVTE-DGQYLVMCIEENCDP-VNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTF 318 (732)
Q Consensus 241 ~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~-~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~ 318 (732)
|...+.+|| |...|+|+-...... ..++|+++.++.. ..++.+...+.......|++||..++|
T Consensus 189 ---wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~-----------~~~v~~~~~~e~~gHEfw~~DG~~i~y 254 (386)
T PF14583_consen 189 ---WLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSN-----------VKKVHRRMEGESVGHEFWVPDGSTIWY 254 (386)
T ss_dssp ----EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS--------------EESS---TTEEEEEEEE-TTSS-EEE
T ss_pred ---cccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCc-----------ceeeecCCCCcccccccccCCCCEEEE
Confidence 677888898 556667765433332 4589999987742 111222222333345689999999988
Q ss_pred EeC-CCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC--------------eeEEEEEeCCCC
Q 004766 319 LTN-KDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV--------------KYVLQIRDLKNG 383 (732)
Q Consensus 319 ~s~-~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g--------------~~~l~~~d~~~g 383 (732)
.+- .++..+-|+.+|+++++ .+.+.+ .+ ...-+..+.|+.|++--..+. .+-|+++++..+
T Consensus 255 ~~~~~~~~~~~i~~~d~~t~~-~~~~~~-~p--~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~ 330 (386)
T PF14583_consen 255 DSYTPGGQDFWIAGYDPDTGE-RRRLME-MP--WCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAG 330 (386)
T ss_dssp EEEETTT--EEEEEE-TTT---EEEEEE-E---SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTT
T ss_pred EeecCCCCceEEEeeCCCCCC-ceEEEe-CC--ceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccC
Confidence 654 44556679999999886 233322 21 123344445555654333221 246788888755
Q ss_pred ceeeecccccc---------e--eeEeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 384 SLLHQLPIEIG---------S--VNAISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 384 ~~~~~l~~~~g---------~--v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
.. ..|..... . --.++++||++.++|. |++.-++.||..++.
T Consensus 331 ~~-~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~-Sd~~G~~~vY~v~i~ 383 (386)
T PF14583_consen 331 RF-RKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFR-SDMEGPPAVYLVEIP 383 (386)
T ss_dssp EE-EEEEE-------BTTBSSTT----EE-TTSSEEEEE-E-TTSS-EEEEEE--
T ss_pred ce-eeeeeccCcceeecCCCccCCCCCccCCCCCEEEEE-CCCCCCccEEEEeCc
Confidence 53 33322110 1 1135678999988765 566788899988764
No 123
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.17 E-value=1.3e-10 Score=105.23 Aligned_cols=222 Identities=13% Similarity=0.121 Sum_probs=144.6
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhH
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 529 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~ 529 (732)
.++.+.|- ..| +--+-|+.|. ...|++|++||||+...+..-.-....-+..+||.|+.++|--+..
T Consensus 44 r~e~l~Yg-~~g--~q~VDIwg~~-----~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q----- 110 (270)
T KOG4627|consen 44 RVEHLRYG-EGG--RQLVDIWGST-----NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQ----- 110 (270)
T ss_pred chhccccC-CCC--ceEEEEecCC-----CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcc-----
Confidence 34445443 233 2234445553 4679999999999876655544333333444999999998754321
Q ss_pred HhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhh-CCCeeeEEEEcCCcccccccccCCCCC
Q 004766 530 HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ-RPDLFGCALAHVGVMDMLRYHKFTIGH 608 (732)
Q Consensus 530 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~-~p~~f~a~v~~~p~~d~~~~~~~~~~~ 608 (732)
...-..++.|+...++|+.+. +-..++|.+.|||+|+.|++.++.+ +.-++.+++..+|+.++......+.+
T Consensus 111 -----~htL~qt~~~~~~gv~filk~-~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g- 183 (270)
T KOG4627|consen 111 -----VHTLEQTMTQFTHGVNFILKY-TENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESG- 183 (270)
T ss_pred -----cccHHHHHHHHHHHHHHHHHh-cccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccc-
Confidence 112235688999999998875 2345789999999999999987764 55588999999999988665443222
Q ss_pred ccccccCCCCCHHHHHHHHhcCccc-CCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCC
Q 004766 609 AWVSDFGCSEEEEEFYWLIKYSPLH-NVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSP 687 (732)
Q Consensus 609 ~~~~~~g~p~~~~~~~~~~~~sp~~-~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 687 (732)
...|..++. .+..||.. ..+. ++-|+||+.+.+|.---++|.+.|+++++++
T Consensus 184 ---~dlgLt~~~-----ae~~Scdl~~~~~----------v~~~ilVv~~~~espklieQnrdf~~q~~~a--------- 236 (270)
T KOG4627|consen 184 ---NDLGLTERN-----AESVSCDLWEYTD----------VTVWILVVAAEHESPKLIEQNRDFADQLRKA--------- 236 (270)
T ss_pred ---cccCcccch-----hhhcCccHHHhcC----------ceeeeeEeeecccCcHHHHhhhhHHHHhhhc---------
Confidence 112222211 12334432 2222 5678999999999988899999999999865
Q ss_pred CCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 004766 688 QTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 688 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 725 (732)
.+..|++.+|.---.. .+.....+..|+.+.
T Consensus 237 -----~~~~f~n~~hy~I~~~--~~~~~s~~~~~~~~~ 267 (270)
T KOG4627|consen 237 -----SFTLFKNYDHYDIIEE--TAIDDSDVSRFLRNI 267 (270)
T ss_pred -----ceeecCCcchhhHHHH--hccccchHHHHHHHH
Confidence 6778999999632111 122334455566554
No 124
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.15 E-value=1.2e-10 Score=130.11 Aligned_cols=225 Identities=17% Similarity=0.124 Sum_probs=131.7
Q ss_pred eEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcC-cEEEEEccc-CCCCCchhHHhcccccCCccH
Q 004766 464 KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLG-AVFCIANIR-GGGEYGEEWHKGGALAKKQNC 541 (732)
Q Consensus 464 ~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~r-G~g~~g~~~~~~~~~~~~~~~ 541 (732)
-+.+.++.|......++.|+||++|||.......... ....++.+.+ ++|+.+||| |..+|...... ...+-..
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~~~n~g 153 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---ELPGNYG 153 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCC---CCCcchh
Confidence 3667778887643356789999999995443333322 2234444344 999999999 66565432211 1222345
Q ss_pred HHHHHHHHHHHHHc---CCCCCCcEEEEecChhHHHHHHHHhh--CCCeeeEEEEcCCcccccccccCCCC---Cccccc
Q 004766 542 FDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGVMDMLRYHKFTIG---HAWVSD 613 (732)
Q Consensus 542 ~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p~~d~~~~~~~~~~---~~~~~~ 613 (732)
+.|+++|++|+.++ --.||+||.|+|+|+||.++..++.. .+.+|+++|+.+|............. ......
T Consensus 154 ~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~~~~~~~ 233 (493)
T cd00312 154 LKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALSPWAIQENARGRAKRLARL 233 (493)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccCcccccccHHHHHHHHHHH
Confidence 89999999999876 23699999999999999999988886 34589999999886653221110000 012234
Q ss_pred cCCCC--CHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCC
Q 004766 614 FGCSE--EEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNP 691 (732)
Q Consensus 614 ~g~p~--~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 691 (732)
.|+.. ..+..+.|++.++-..++.... +.. ....+.+...-.-|..+-+.++.++.+.=+. .++|
T Consensus 234 lgc~~~~~~~~l~cLr~~~~~~l~~a~~~-~~~--~~~~~~~~f~PvvDg~~lp~~p~~~~~~g~~----------~~vP 300 (493)
T cd00312 234 LGCNDTSSAELLDCLRSKSAEELLDATRK-LLL--FSYSPFLPFGPVVDGDFIPDDPEELIKEGKF----------AKVP 300 (493)
T ss_pred cCCCCCCHHHHHHHHhcCCHHHHHHHHHh-hcc--ccccCccceeeecCCCCCCcCHHHHHhcCCC----------CCCC
Confidence 56642 2345566777665432221000 000 0001111112223444555666555433211 2789
Q ss_pred EEEEEeCCCCCCCC
Q 004766 692 IIGRIERKAGHGVG 705 (732)
Q Consensus 692 ~~~~~~~~~gH~~~ 705 (732)
+.+-...++|..+.
T Consensus 301 vLiG~t~dEg~~f~ 314 (493)
T cd00312 301 LIIGVTKDEGGYFA 314 (493)
T ss_pred EEEEEeccchhhhH
Confidence 99888888887543
No 125
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.12 E-value=8.9e-09 Score=102.51 Aligned_cols=248 Identities=18% Similarity=0.123 Sum_probs=142.3
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccccc--ceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALS--WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
+-.++||++|++||-++... ..-||...-++.-.+..+.. ...+.-+.||||+++|+-+..++
T Consensus 227 VWfl~FS~nGkyLAsaSkD~---Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e------------ 291 (519)
T KOG0293|consen 227 VWFLQFSHNGKYLASASKDS---TAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE------------ 291 (519)
T ss_pred EEEEEEcCCCeeEeeccCCc---eEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchH------------
Confidence 55788999999999664321 12344433333322222211 11246789999999998764332
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
.+++|++.|+... ..|.... ..-..+.+|-|||..++..+.+ ..++.+|+++..
T Consensus 292 -------~~~lwDv~tgd~~--~~y~~~~-~~S~~sc~W~pDg~~~V~Gs~d-----r~i~~wdlDgn~----------- 345 (519)
T KOG0293|consen 292 -------VLSLWDVDTGDLR--HLYPSGL-GFSVSSCAWCPDGFRFVTGSPD-----RTIIMWDLDGNI----------- 345 (519)
T ss_pred -------heeeccCCcchhh--hhcccCc-CCCcceeEEccCCceeEecCCC-----CcEEEecCCcch-----------
Confidence 3889999887543 3443321 1224578999999997655433 448889988732
Q ss_pred CCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecC
Q 004766 292 LLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSD 370 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~ 370 (732)
...|+-..... .+. ..++||+.++.++.+ .++..++.++..+ +.++.+. ..+.++.+++++++++....+
T Consensus 346 ~~~W~gvr~~~--v~dlait~Dgk~vl~v~~d----~~i~l~~~e~~~d-r~lise~--~~its~~iS~d~k~~LvnL~~ 416 (519)
T KOG0293|consen 346 LGNWEGVRDPK--VHDLAITYDGKYVLLVTVD----KKIRLYNREARVD-RGLISEE--QPITSFSISKDGKLALVNLQD 416 (519)
T ss_pred hhcccccccce--eEEEEEcCCCcEEEEEecc----cceeeechhhhhh-hcccccc--CceeEEEEcCCCcEEEEEccc
Confidence 12233222111 111 367899998877643 2466666665542 2245443 678999999888877776666
Q ss_pred CeeEEEEEeCCCCceeeecccc-cceeeEeecccC-CcEEEEEEecCCCCceEEEEECCCCCCceEEEE
Q 004766 371 VKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARRE-DSVVFISFTSFLIPGIVYQCNLKTETPEMKIFR 437 (732)
Q Consensus 371 g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~d-~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~ 437 (732)
..+.+||++..+.+++.... .+.. -+..-+. ++.-++. |-..-..+|.++..+|+. +..|.
T Consensus 417 --qei~LWDl~e~~lv~kY~Ghkq~~f-iIrSCFgg~~~~fia--SGSED~kvyIWhr~sgkl-l~~Ls 479 (519)
T KOG0293|consen 417 --QEIHLWDLEENKLVRKYFGHKQGHF-IIRSCFGGGNDKFIA--SGSEDSKVYIWHRISGKL-LAVLS 479 (519)
T ss_pred --CeeEEeecchhhHHHHhhcccccce-EEEeccCCCCcceEE--ecCCCceEEEEEccCCce-eEeec
Confidence 57899999744333333222 1111 1111122 2222222 223457899999988862 44443
No 126
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.11 E-value=3.3e-09 Score=103.39 Aligned_cols=118 Identities=16% Similarity=0.169 Sum_probs=88.5
Q ss_pred eEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHH
Q 004766 464 KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFD 543 (732)
Q Consensus 464 ~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~ 543 (732)
..|..+++|+. .+.+|+||+.||.. . .+.+-......+++.||+|+.++...-. ........+
T Consensus 3 p~~l~v~~P~~---~g~yPVv~f~~G~~-~--~~s~Ys~ll~hvAShGyIVV~~d~~~~~-----------~~~~~~~~~ 65 (259)
T PF12740_consen 3 PKPLLVYYPSS---AGTYPVVLFLHGFL-L--INSWYSQLLEHVASHGYIVVAPDLYSIG-----------GPDDTDEVA 65 (259)
T ss_pred CCCeEEEecCC---CCCcCEEEEeCCcC-C--CHHHHHHHHHHHHhCceEEEEecccccC-----------CCCcchhHH
Confidence 34678889987 48899999999976 2 3344334556677799999999954421 122334578
Q ss_pred HHHHHHHHHHHc---C-----CCCCCcEEEEecChhHHHHHHHHhhC-----CCeeeEEEEcCCcccc
Q 004766 544 DFISASEYLISA---G-----YTQSRKLCIEGGSNGGLLVGACINQR-----PDLFGCALAHVGVMDM 598 (732)
Q Consensus 544 D~~~~~~~l~~~---~-----~~d~~~i~i~G~S~GG~l~~~~~~~~-----p~~f~a~v~~~p~~d~ 598 (732)
++.+.++||.+. . ..|-+||+|+|||.||-++..++.++ +.+|+|+|+..|+-.+
T Consensus 66 ~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~ 133 (259)
T PF12740_consen 66 SAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGM 133 (259)
T ss_pred HHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccccc
Confidence 888899998762 1 24778999999999999999888886 5589999999997643
No 127
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.11 E-value=1.6e-09 Score=108.82 Aligned_cols=99 Identities=13% Similarity=0.035 Sum_probs=69.7
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
.|.||++||..++.. .|.... ..| ++|.|+++|+||.|..... ....++++.+.+..+++.- ..
T Consensus 2 ~p~vvllHG~~~~~~--~w~~~~-~~l--~~~~vi~~D~~G~G~S~~~---------~~~~~~~~~~~l~~~l~~~--~~ 65 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ--DWQPVG-EAL--PDYPRLYIDLPGHGGSAAI---------SVDGFADVSRLLSQTLQSY--NI 65 (242)
T ss_pred CCEEEEECCCCCChH--HHHHHH-HHc--CCCCEEEecCCCCCCCCCc---------cccCHHHHHHHHHHHHHHc--CC
Confidence 378999999877643 454433 344 3699999999998865321 1124555555555555442 34
Q ss_pred CcEEEEecChhHHHHHHHHhhCCC-eeeEEEEcCCc
Q 004766 561 RKLCIEGGSNGGLLVGACINQRPD-LFGCALAHVGV 595 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~p~-~f~a~v~~~p~ 595 (732)
+++.++|+|+||.+++.++.++|+ +++++|+..+.
T Consensus 66 ~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 66 LPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred CCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 689999999999999999999865 48888876544
No 128
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.10 E-value=5.1e-09 Score=106.87 Aligned_cols=107 Identities=20% Similarity=0.191 Sum_probs=75.6
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCC
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 557 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 557 (732)
.+..|.||++||..+.. ..|.. ....|.++||.|+++|+||.|.... ......+++++.+.+..+++.-
T Consensus 15 ~~~~p~vvliHG~~~~~--~~w~~-~~~~L~~~g~~vi~~dl~g~G~s~~-------~~~~~~~~~~~~~~l~~~i~~l- 83 (273)
T PLN02211 15 NRQPPHFVLIHGISGGS--WCWYK-IRCLMENSGYKVTCIDLKSAGIDQS-------DADSVTTFDEYNKPLIDFLSSL- 83 (273)
T ss_pred cCCCCeEEEECCCCCCc--CcHHH-HHHHHHhCCCEEEEecccCCCCCCC-------CcccCCCHHHHHHHHHHHHHhc-
Confidence 35678999999987653 34543 3455665899999999999874211 0112245666665555554431
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
...+++.++||||||+++..++.++|++++++|...+.
T Consensus 84 ~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 84 PENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred CCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 12368999999999999999999999999999887664
No 129
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.09 E-value=2.2e-10 Score=119.22 Aligned_cols=214 Identities=18% Similarity=0.173 Sum_probs=133.4
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCC---CCccCCCCcChhHHHHHHhcC-cEEEEEcccCCCCCch-hHHhcc--cccC
Q 004766 465 IPMFIVSKKNIKLDGSHPCLLYGYGG---FNISVTPSFSVSRTILMRHLG-AVFCIANIRGGGEYGE-EWHKGG--ALAK 537 (732)
Q Consensus 465 i~~~~~~p~~~~~~~~~P~vv~~hG~---~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~rG~g~~g~-~~~~~~--~~~~ 537 (732)
+..-|+.|. ....+.|+|||+||| .|+...+.|.+. .|+++| ++|+.+|||-|- +|- ++.... ....
T Consensus 80 L~LNIwaP~--~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs---~La~~g~vVvVSvNYRLG~-lGfL~~~~~~~~~~~~ 153 (491)
T COG2272 80 LYLNIWAPE--VPAEKLPVMVYIHGGGYIMGSGSEPLYDGS---ALAARGDVVVVSVNYRLGA-LGFLDLSSLDTEDAFA 153 (491)
T ss_pred eeEEeeccC--CCCCCCcEEEEEeccccccCCCcccccChH---HHHhcCCEEEEEeCccccc-ceeeehhhcccccccc
Confidence 556667787 234678999999999 356666777764 345577 999999999653 221 222221 1111
Q ss_pred CccHHHHHHHHHHHHHHc---CCCCCCcEEEEecChhHHHHHHHHhhCCC---eeeEEEEcCCcccccccccC--CCCCc
Q 004766 538 KQNCFDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQRPD---LFGCALAHVGVMDMLRYHKF--TIGHA 609 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~p~~d~~~~~~~--~~~~~ 609 (732)
.-..+.|++.|++|+.++ ---||++|.|+|.|+|++.++.++.. |. +|+-+|+.+|-.-....... .....
T Consensus 154 ~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~~~~s~~~A~~~a~~ 232 (491)
T COG2272 154 SNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAASRVTSREEAREKAAA 232 (491)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCCccCcHHHHHHHHHH
Confidence 124689999999999876 33699999999999999999988885 65 78888888886642221110 00112
Q ss_pred cccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCC---CCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCC
Q 004766 610 WVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPD---KPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENS 686 (732)
Q Consensus 610 ~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~---~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 686 (732)
+...+|.+ .+..+.++..++-..++... .+.. ....++|+ -|+.+-+.++..+.+.-+..
T Consensus 233 f~~~lG~~--~~~~~~L~~~~~~~L~~~~~-~~~~~~~~~~~~~p~------~~d~~lp~~P~e~~~~g~~~-------- 295 (491)
T COG2272 233 FARALGIP--EATLDKLRALSAEDLVKARL-PLIGRTFGAVPYGPV------LGDSLLPRDPLEAIAQGRSH-------- 295 (491)
T ss_pred HHHHhCCC--HHHHHHHhcCCHHHHHhhhh-hhccccCCCcCCCCc------cCcccccCChhhhhhccccc--------
Confidence 23456776 44555566665543332200 0000 00113343 24446666777777776655
Q ss_pred CCCCCEEEEEeCCCCCCC
Q 004766 687 PQTNPIIGRIERKAGHGV 704 (732)
Q Consensus 687 ~~~~~~~~~~~~~~gH~~ 704 (732)
++|+.+-+.-++|-.+
T Consensus 296 --~vpl~iGtn~dEg~~f 311 (491)
T COG2272 296 --GVPLMIGTNHDEGSLF 311 (491)
T ss_pred --CCcEEeeccCCcceEE
Confidence 7888887777777665
No 130
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.09 E-value=2.2e-08 Score=109.79 Aligned_cols=231 Identities=17% Similarity=0.118 Sum_probs=143.7
Q ss_pred CCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEEC-CCCceecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 129 DGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRI-EDQIVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 129 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl-~~g~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
++...+..+.|||||++|+ .+++..+|+|||+ ..+..+.. .........++|+|+|+.|+..+.++
T Consensus 201 ~h~~~v~~~~fs~d~~~l~-----s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~------- 268 (456)
T KOG0266|consen 201 GHTRGVSDVAFSPDGSYLL-----SGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDG------- 268 (456)
T ss_pred ccccceeeeEECCCCcEEE-----EecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCC-------
Confidence 3456788999999999776 3455589999999 44454321 11222348899999997666655433
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
.|++|++.++... ..+.. +...+..+++++||++|+..+. ...+.++|+.++..
T Consensus 269 ------------tvriWd~~~~~~~--~~l~~--hs~~is~~~f~~d~~~l~s~s~-----d~~i~vwd~~~~~~----- 322 (456)
T KOG0266|consen 269 ------------TVRIWDVRTGECV--RKLKG--HSDGISGLAFSPDGNLLVSASY-----DGTIRVWDLETGSK----- 322 (456)
T ss_pred ------------cEEEEeccCCeEE--Eeeec--cCCceEEEEECCCCCEEEEcCC-----CccEEEEECCCCce-----
Confidence 5899999885322 23322 3345678999999999976643 24588889887530
Q ss_pred cccCCCCCcEEeeecccc---eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCC-CceeEEEEecCCE
Q 004766 287 KKRDGLLPFVKLIDGFDA---QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAER-DVLESATAVNLNQ 362 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~~---~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~l~~~~~~~~~~ 362 (732)
.....+...... ....|+|+|+.++..+. +..|..+|+..+........+... .-+..+..+.++.
T Consensus 323 ------~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~----d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (456)
T KOG0266|consen 323 ------LCLKLLSGAENSAPVTSVQFSPNGKYLLSASL----DRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGK 392 (456)
T ss_pred ------eeeecccCCCCCCceeEEEECCCCcEEEEecC----CCeEEEEEccCCcceeeecccCCcceeEecccccCCCC
Confidence 001112211111 22348899988776443 345777888776544555555432 1222333344467
Q ss_pred EEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEeecccCCcEEE
Q 004766 363 MIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVF 409 (732)
Q Consensus 363 l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~d~~~l~ 409 (732)
+++....+ ..|++|++.++..+..+... ...+..++.++..+.+.
T Consensus 393 ~i~sg~~d--~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~ 438 (456)
T KOG0266|consen 393 LIYSGSED--GSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIA 438 (456)
T ss_pred eEEEEeCC--ceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeee
Confidence 77777777 47899999877766666655 55555666666666443
No 131
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.07 E-value=4.1e-09 Score=111.74 Aligned_cols=122 Identities=15% Similarity=-0.007 Sum_probs=82.7
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccC
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 537 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 537 (732)
+.+| .++.+.. .+ ++..|.||++||.+.... .|.. ....|+ .+|.|+++|.||.|....... ...
T Consensus 111 ~~~~-~~~~y~~---~G---~~~~~~ivllHG~~~~~~--~w~~-~~~~L~-~~~~Via~DlpG~G~S~~p~~----~~~ 175 (383)
T PLN03084 111 SSDL-FRWFCVE---SG---SNNNPPVLLIHGFPSQAY--SYRK-VLPVLS-KNYHAIAFDWLGFGFSDKPQP----GYG 175 (383)
T ss_pred cCCc-eEEEEEe---cC---CCCCCeEEEECCCCCCHH--HHHH-HHHHHh-cCCEEEEECCCCCCCCCCCcc----ccc
Confidence 3577 6665332 22 124589999999866532 4443 345677 689999999999875422110 001
Q ss_pred CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 538 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
...+++++...+..+++.- ..+++.++|+|+||+++..++.++|++++++|+..|..
T Consensus 176 ~~ys~~~~a~~l~~~i~~l--~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 176 FNYTLDEYVSSLESLIDEL--KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred ccCCHHHHHHHHHHHHHHh--CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 1235666666666655542 23589999999999999999999999999999887753
No 132
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.03 E-value=3.6e-09 Score=109.64 Aligned_cols=212 Identities=14% Similarity=0.070 Sum_probs=126.1
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
...|.||++||...+ ...|......+..+.|+.|.++|..|.|-. .+.. .....+..+....+..+...-..
T Consensus 56 ~~~~pvlllHGF~~~--~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~--s~~~----~~~~y~~~~~v~~i~~~~~~~~~ 127 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGAS--SFSWRRVVPLLSKAKGLRVLAIDLPGHGYS--SPLP----RGPLYTLRELVELIRRFVKEVFV 127 (326)
T ss_pred CCCCcEEEeccccCC--cccHhhhccccccccceEEEEEecCCCCcC--CCCC----CCCceehhHHHHHHHHHHHhhcC
Confidence 467899999996553 345554433333434799999999995521 1111 11224566777776665554333
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEE---EcCCcccccccc--------c-------------CCCC-Cccccc
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCAL---AHVGVMDMLRYH--------K-------------FTIG-HAWVSD 613 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v---~~~p~~d~~~~~--------~-------------~~~~-~~~~~~ 613 (732)
+++.++|+|+||+++..+|..+|+..+.+| ...|........ . .... ..|...
T Consensus 128 --~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 205 (326)
T KOG1454|consen 128 --EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEG 205 (326)
T ss_pred --cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHh
Confidence 349999999999999999999999999998 443332211000 0 0000 001100
Q ss_pred --------cCCC-CCHHHHHHHHh-----------------------cCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCC
Q 004766 614 --------FGCS-EEEEEFYWLIK-----------------------YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDD 661 (732)
Q Consensus 614 --------~g~p-~~~~~~~~~~~-----------------------~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~ 661 (732)
+.++ .+.+....+.. ..+...+++ ..+.|+||++|+.|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------i~~~pvlii~G~~D~ 276 (326)
T KOG1454|consen 206 LLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKK---------IWKCPVLIIWGDKDQ 276 (326)
T ss_pred hhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhcc---------ccCCceEEEEcCcCC
Confidence 0111 01111100100 011122233 134999999999999
Q ss_pred CCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 004766 662 RVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 662 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 725 (732)
.+|.+.+..+.+++. .+++++.+++||....... .+..+.+..|+.++
T Consensus 277 ~~p~~~~~~~~~~~p--------------n~~~~~I~~~gH~~h~e~P--e~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 277 IVPLELAEELKKKLP--------------NAELVEIPGAGHLPHLERP--EEVAALLRSFIARL 324 (326)
T ss_pred ccCHHHHHHHHhhCC--------------CceEEEeCCCCcccccCCH--HHHHHHHHHHHHHh
Confidence 999997777766652 2589999999998766443 35566778888765
No 133
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.03 E-value=2.6e-07 Score=93.90 Aligned_cols=275 Identities=12% Similarity=0.109 Sum_probs=158.1
Q ss_pred HhhcCC-CCCCCcEEeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEE-ECCCCcEEEEEEec
Q 004766 75 TKLFDS-PRYDAPFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVS-VSEDAKYLAYALSY 152 (732)
Q Consensus 75 ~~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~-~SPDG~~la~~~~~ 152 (732)
+..+.. ..+|.|...|++.||...-.+-. .||..+. |.+.|.+...+.-..++ .+.||++|.|..
T Consensus 219 eK~vdl~~~vS~PmIV~~RvYFlsD~eG~G--nlYSvdl---------dGkDlrrHTnFtdYY~R~~nsDGkrIvFq~-- 285 (668)
T COG4946 219 EKFVDLDGNVSSPMIVGERVYFLSDHEGVG--NLYSVDL---------DGKDLRRHTNFTDYYPRNANSDGKRIVFQN-- 285 (668)
T ss_pred eeeeecCCCcCCceEEcceEEEEecccCcc--ceEEecc---------CCchhhhcCCchhccccccCCCCcEEEEec--
Confidence 334433 46888888888988887644433 3776543 33333221112222233 788999999984
Q ss_pred cCCceEEEEEEECCCCceeccccc--------ce------ee-eeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcc
Q 004766 153 SGSDWATIKLMRIEDQIVEADALS--------WF------KF-SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLY 217 (732)
Q Consensus 153 ~G~e~~~i~v~dl~~g~~~~~~~~--------~~------~~-~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~ 217 (732)
+| .||++|.++.......+. .. ++ ..++-+ +|..|++++...
T Consensus 286 ~G----dIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~-~Gd~ia~VSRGk------------------ 342 (668)
T COG4946 286 AG----DIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVV-NGDYIALVSRGK------------------ 342 (668)
T ss_pred CC----cEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccC-CCcEEEEEecCc------------------
Confidence 33 699999887653211111 00 01 113333 677777775321
Q ss_pred cEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEE
Q 004766 218 HEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVK 297 (732)
Q Consensus 218 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 297 (732)
.+..+...+. +.+.+. ++-+.-..++-|++-+++...+++ .+-+++..+++ .+.
T Consensus 343 --aFi~~~~~~~-----~iqv~~-~~~VrY~r~~~~~e~~vigt~dgD----~l~iyd~~~~e--------------~kr 396 (668)
T COG4946 343 --AFIMRPWDGY-----SIQVGK-KGGVRYRRIQVDPEGDVIGTNDGD----KLGIYDKDGGE--------------VKR 396 (668)
T ss_pred --EEEECCCCCe-----eEEcCC-CCceEEEEEccCCcceEEeccCCc----eEEEEecCCce--------------EEE
Confidence 2322221111 011111 111222345556665555544432 46677877753 223
Q ss_pred eeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCe--eE
Q 004766 298 LIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVK--YV 374 (732)
Q Consensus 298 l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~--~~ 374 (732)
...+...... ..++||+.+++ +| .++.|+.+|++++. ..++...+...|.++.|+++.+.++..-..|. +.
T Consensus 397 ~e~~lg~I~av~vs~dGK~~vv-aN---dr~el~vididngn--v~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~ 470 (668)
T COG4946 397 IEKDLGNIEAVKVSPDGKKVVV-AN---DRFELWVIDIDNGN--VRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQS 470 (668)
T ss_pred eeCCccceEEEEEcCCCcEEEE-Ec---CceEEEEEEecCCC--eeEecccccceeEEEEEcCCceeEEEecCcceeeee
Confidence 3333322222 37888887664 44 36899999999997 55666666678999999997666666555654 68
Q ss_pred EEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCC
Q 004766 375 LQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIP 418 (732)
Q Consensus 375 l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p 418 (732)
|.++|.++|+. -.++.|.+.=.+.++++|++.|+|....-..|
T Consensus 471 Iklydm~~~Ki-y~vTT~ta~DfsPaFD~d~ryLYfLs~RsLdP 513 (668)
T COG4946 471 IKLYDMDGGKI-YDVTTPTAYDFSPAFDPDGRYLYFLSARSLDP 513 (668)
T ss_pred EEEEecCCCeE-EEecCCcccccCcccCCCCcEEEEEeccccCC
Confidence 99999986675 67776743333567888999888766554444
No 134
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=99.02 E-value=4.6e-07 Score=92.89 Aligned_cols=259 Identities=11% Similarity=0.109 Sum_probs=133.2
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
.....|.+||++|+|..+..|. .++|++||++++..+.+... ....+..+||+++.|+|....
T Consensus 38 F~~~~ft~dG~kllF~s~~dg~--~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~-------------- 101 (386)
T PF14583_consen 38 FYQNCFTDDGRKLLFASDFDGN--RNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNG-------------- 101 (386)
T ss_dssp TTS--B-TTS-EEEEEE-TTSS---EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETT--------------
T ss_pred ecCCCcCCCCCEEEEEeccCCC--cceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECC--------------
Confidence 3467799999999999998776 69999999999976654322 112467899999999998522
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEE--ecCCcEEEEEEecCC-----------------cceEEEEE
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHV--TEDGQYLVMCIEENC-----------------DPVNKVYY 273 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~--SpDg~~l~~~~~~~~-----------------~~~~~l~~ 273 (732)
..|+..++.|.+. .+||+.++. |.....| ..|++.++....... ....+|+.
T Consensus 102 -----~~l~~vdL~T~e~--~~vy~~p~~--~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~ 172 (386)
T PF14583_consen 102 -----RSLRRVDLDTLEE--RVVYEVPDD--WKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFT 172 (386)
T ss_dssp -----TEEEEEETTT--E--EEEEE--TT--EEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEE
T ss_pred -----CeEEEEECCcCcE--EEEEECCcc--cccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEE
Confidence 3689999998753 478887753 4433444 457888766543322 12478999
Q ss_pred EeCCCCCCCcccccccCCCCCcEEeee-cccceEEEEEecCCeEEEEeCCC---CCCceEEEEeCCCCCCceEeccCCCC
Q 004766 274 CDLSALPEGLEGFKKRDGLLPFVKLID-GFDAQYEVIANDDTVFTFLTNKD---APKYKIIRVDLKEPNDWFEVIPEAER 349 (732)
Q Consensus 274 ~d~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~s~~~---~~~~~l~~~d~~~~~~~~~l~~~~~~ 349 (732)
+|+.+|+ .+.+.. ..--....+||....++..+.++ .-..+|+.++.++.. .+.+..+.+.
T Consensus 173 idl~tG~--------------~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~-~~~v~~~~~~ 237 (386)
T PF14583_consen 173 IDLKTGE--------------RKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSN-VKKVHRRMEG 237 (386)
T ss_dssp EETTT----------------EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS----EESS---TT
T ss_pred EECCCCc--------------eeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCc-ceeeecCCCC
Confidence 9999864 333333 22223445788544555455443 224589999987765 4555554433
Q ss_pred CceeEEEEecC-CEEEE-EEecCCe-eEEEEEeCCCCceeeec-ccccceeeEeecccCCcEEEEEEec--CC-------
Q 004766 350 DVLESATAVNL-NQMIV-SYLSDVK-YVLQIRDLKNGSLLHQL-PIEIGSVNAISARREDSVVFISFTS--FL------- 416 (732)
Q Consensus 350 ~~l~~~~~~~~-~~l~~-~~~~~g~-~~l~~~d~~~g~~~~~l-~~~~g~v~~~~~s~d~~~l~~~~ss--~~------- 416 (732)
..+.-=.|.++ ..+++ .....+. ..|..+++++++. +.+ ..|. .+ .+..++|++.+ +.=.+ +.
T Consensus 238 e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~-~~~~~~p~-~~-H~~ss~Dg~L~-vGDG~d~p~~v~~~~~ 313 (386)
T PF14583_consen 238 ESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGER-RRLMEMPW-CS-HFMSSPDGKLF-VGDGGDAPVDVADAGG 313 (386)
T ss_dssp EEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--E-EEEEEE-S-EE-EEEE-TTSSEE-EEEE------------
T ss_pred cccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCc-eEEEeCCc-ee-eeEEcCCCCEE-EecCCCCCcccccccc
Confidence 33333345554 45554 4445543 3678888988876 333 2332 22 44556777633 22222 11
Q ss_pred ----CCceEEEEECCCCCCceEEEEe
Q 004766 417 ----IPGIVYQCNLKTETPEMKIFRE 438 (732)
Q Consensus 417 ----~p~~~y~~d~~~~~~~~~~l~~ 438 (732)
.-+-+|.+++..+. ...+..
T Consensus 314 ~~~~~~p~i~~~~~~~~~--~~~l~~ 337 (386)
T PF14583_consen 314 YKIENDPWIYLFDVEAGR--FRKLAR 337 (386)
T ss_dssp -------EEEEEETTTTE--EEEEEE
T ss_pred ceecCCcEEEEeccccCc--eeeeee
Confidence 11367778887663 444443
No 135
>COG0627 Predicted esterase [General function prediction only]
Probab=99.02 E-value=3.7e-09 Score=107.58 Aligned_cols=231 Identities=16% Similarity=0.133 Sum_probs=147.0
Q ss_pred CCCccEEEEEcCCCCccCC-CCcChhHHHHHHhcCcEEEEEccc--------------CCC-CCchhHHhcccccCCccH
Q 004766 478 DGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIR--------------GGG-EYGEEWHKGGALAKKQNC 541 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~r--------------G~g-~~g~~~~~~~~~~~~~~~ 541 (732)
+.+.|++++.||--..... ..+. .+....++.|++++.+|.. |++ +|-.+|........ ...
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~-g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~-~~q 128 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLD-GLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASG-PYQ 128 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEecc-chhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccC-ccc
Confidence 4678888888886443211 1112 2345566788888887432 332 44445555432222 345
Q ss_pred HHHHHHH-HH-HHHHcCCCCC--CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCC-------CCCcc
Q 004766 542 FDDFISA-SE-YLISAGYTQS--RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFT-------IGHAW 610 (732)
Q Consensus 542 ~~D~~~~-~~-~l~~~~~~d~--~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~-------~~~~~ 610 (732)
+++|+.. +- .+.+...++. ++.+|.|+||||+-++.++..+||+|+.+.+.+|+++.......+ -+..+
T Consensus 129 ~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~ 208 (316)
T COG0627 129 WETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAF 208 (316)
T ss_pred hhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccH
Confidence 6666643 22 2333444454 389999999999999999999999999999999999887443322 11122
Q ss_pred ccccCCCCCHHHHHHHHhcCcccCCCCCCCC---C--CCCCCCCCeEEEEeeCCCCCCC--chHHHHHHHHHHHhhcCCC
Q 004766 611 VSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQ---N--PDKPFQYPSTLLLTADHDDRVV--PLHSLKLLATMQYVLCTSL 683 (732)
Q Consensus 611 ~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~---~--~~~~~~~~p~Li~~g~~D~~v~--~~~~~~~~~~l~~~~~~~~ 683 (732)
..-||.+.++. .++++|..+++++... . ... ...+++++.+|..|.... -..+.++.++++++
T Consensus 209 ~~~~G~~~~~~----w~~~D~~~~~~~l~~~~~~~~~~~~-~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~----- 278 (316)
T COG0627 209 NAMLGPDSDPA----WQENDPLSLIEKLVANANTRIWVYG-GSPPELLIDNGPADFFLAANNLSTRAFAEALRAA----- 278 (316)
T ss_pred HHhcCCCcccc----ccccCchhHHHHhhhcccccceecc-cCCCccccccccchhhhhhcccCHHHHHHHHHhc-----
Confidence 23356554432 3466777666541000 0 000 034788999999998764 33388999999988
Q ss_pred CCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC
Q 004766 684 ENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
|.+..++..++..|.... ....+...+.|+.+.|+..
T Consensus 279 -----g~~~~~~~~~~G~Hsw~~----w~~~l~~~~~~~a~~l~~~ 315 (316)
T COG0627 279 -----GIPNGVRDQPGGDHSWYF----WASQLADHLPWLAGALGLA 315 (316)
T ss_pred -----CCCceeeeCCCCCcCHHH----HHHHHHHHHHHHHHHhccC
Confidence 899999998888887532 3456678889999988764
No 136
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.01 E-value=8.8e-09 Score=109.49 Aligned_cols=114 Identities=12% Similarity=0.027 Sum_probs=76.6
Q ss_pred CCccEEEEEcCCCCccCC----------CCcChhH---HHHHHhcCcEEEEEcccCCCC--------CchhHHhcccc--
Q 004766 479 GSHPCLLYGYGGFNISVT----------PSFSVSR---TILMRHLGAVFCIANIRGGGE--------YGEEWHKGGAL-- 535 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~----------~~~~~~~---~~~l~~~G~~v~~~~~rG~g~--------~g~~~~~~~~~-- 535 (732)
.+.++||+.|+--+.+.. +.|...+ -..++..-|-|+++|+-|++. .|..-...+.+
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 345899999997664311 2232211 234566789999999998752 23221111111
Q ss_pred ---cCCccHHHHHHHHHHHHHHcCCCCCCcEE-EEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 536 ---AKKQNCFDDFISASEYLISAGYTQSRKLC-IEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 536 ---~~~~~~~~D~~~~~~~l~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
.....++.|+.+++..|++.- .-+++. ++|+||||++++.++.++|++++.+|+.+.
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~l--gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSL--GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEec
Confidence 233467899998888877652 235775 999999999999999999999999887643
No 137
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.00 E-value=1.2e-08 Score=127.18 Aligned_cols=245 Identities=13% Similarity=0.044 Sum_probs=132.2
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHH
Q 004766 465 IPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDD 544 (732)
Q Consensus 465 i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D 544 (732)
+.+++.+...- .....|+||++||..+... .|.. +...|. .+|.|+++|.||.|.....-...........++++
T Consensus 1356 ~~~~i~~~~~G-~~~~~~~vVllHG~~~s~~--~w~~-~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~ 1430 (1655)
T PLN02980 1356 FSCLIKVHEVG-QNAEGSVVLFLHGFLGTGE--DWIP-IMKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVEL 1430 (1655)
T ss_pred eEEEEEEEecC-CCCCCCeEEEECCCCCCHH--HHHH-HHHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHH
Confidence 55555443321 1234689999999877653 3443 345566 67999999999988653210000000111234566
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccc--cc---cC----------CCC--
Q 004766 545 FISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR--YH---KF----------TIG-- 607 (732)
Q Consensus 545 ~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~--~~---~~----------~~~-- 607 (732)
+.+.+..++++ ...+++.++|+||||.++..++.++|++++++|+..+...+.. .. .. ..+
T Consensus 1431 ~a~~l~~ll~~--l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 1508 (1655)
T PLN02980 1431 VADLLYKLIEH--ITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLE 1508 (1655)
T ss_pred HHHHHHHHHHH--hCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHH
Confidence 66665555554 2356899999999999999999999999999987654321110 00 00 000
Q ss_pred ---Cccccc--cCCC-CCHHHHH----------------HHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCc
Q 004766 608 ---HAWVSD--FGCS-EEEEEFY----------------WLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVP 665 (732)
Q Consensus 608 ---~~~~~~--~g~p-~~~~~~~----------------~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~ 665 (732)
..|... +-.. ..+...+ .+...+..... .. .+....+..|+|+++|++|..++
T Consensus 1509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-dl---~~~L~~I~~PtLlI~Ge~D~~~~- 1583 (1655)
T PLN02980 1509 IFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQP-SL---WEDLKQCDTPLLLVVGEKDVKFK- 1583 (1655)
T ss_pred HHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccc-hH---HHHHhhCCCCEEEEEECCCCccH-
Confidence 001100 0000 0111000 01111100000 00 00011378899999999998764
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 004766 666 LHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 666 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 725 (732)
..+.++.+.+.+..... ...+..-+++++++++||...-... ......+..||.+.
T Consensus 1584 ~~a~~~~~~i~~a~~~~--~~~~~~~a~lvvI~~aGH~~~lE~P--e~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1584 QIAQKMYREIGKSKESG--NDKGKEIIEIVEIPNCGHAVHLENP--LPVIRALRKFLTRL 1639 (1655)
T ss_pred HHHHHHHHHcccccccc--ccccccceEEEEECCCCCchHHHCH--HHHHHHHHHHHHhc
Confidence 66677766664320000 0000112689999999998765433 24556677888764
No 138
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.99 E-value=1.3e-08 Score=95.93 Aligned_cols=180 Identities=13% Similarity=0.038 Sum_probs=104.3
Q ss_pred EEEEEcCCCCccCCCCcChhHHHHHHhcC--cEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 483 CLLYGYGGFNISVTPSFSVSRTILMRHLG--AVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 483 ~vv~~hG~~~~~~~~~~~~~~~~~l~~~G--~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
.|+|+||.-.+..+.-. ....+++++.| ..+..+|.+- ..++.++.++.++++. .+
T Consensus 1 ~ilYlHGF~Ssp~S~Ka-~~l~~~~~~~~~~~~~~~p~l~~-------------------~p~~a~~~l~~~i~~~--~~ 58 (187)
T PF05728_consen 1 MILYLHGFNSSPQSFKA-QALKQYFAEHGPDIQYPCPDLPP-------------------FPEEAIAQLEQLIEEL--KP 58 (187)
T ss_pred CeEEecCCCCCCCCHHH-HHHHHHHHHhCCCceEECCCCCc-------------------CHHHHHHHHHHHHHhC--CC
Confidence 37999996544322111 12345566555 3445555432 2355666667777663 34
Q ss_pred CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCC----ccccccCCCCCHHHHHHHHhcCcccCCC
Q 004766 561 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGH----AWVSDFGCSEEEEEFYWLIKYSPLHNVR 636 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~----~~~~~~g~p~~~~~~~~~~~~sp~~~~~ 636 (732)
+.++++|.|+||+.+.+++.+++ .++ |+..|.+.+......-.|. .|.++|. -++.....++++ ....
T Consensus 59 ~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~--~~~~~~~~l~~l---~~~~ 130 (187)
T PF05728_consen 59 ENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYE--LTEEHIEELKAL---EVPY 130 (187)
T ss_pred CCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccCCCCccce--echHhhhhcceE---eccc
Confidence 45999999999999999988864 444 7778887765544322222 2212221 122222223322 2111
Q ss_pred CCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHH
Q 004766 637 RPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAA 716 (732)
Q Consensus 637 ~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 716 (732)
. ...-++|++++..|..+++.++.+.+ +. ....+.+|++|.+..- .+...
T Consensus 131 ~---------~~~~~~lvll~~~DEvLd~~~a~~~~---~~--------------~~~~i~~ggdH~f~~f----~~~l~ 180 (187)
T PF05728_consen 131 P---------TNPERYLVLLQTGDEVLDYREAVAKY---RG--------------CAQIIEEGGDHSFQDF----EEYLP 180 (187)
T ss_pred c---------CCCccEEEEEecCCcccCHHHHHHHh---cC--------------ceEEEEeCCCCCCccH----HHHHH
Confidence 1 12348999999999999996654443 32 1334567899999752 34555
Q ss_pred HHHHHH
Q 004766 717 DRYGFM 722 (732)
Q Consensus 717 ~~~~fl 722 (732)
.+.+|+
T Consensus 181 ~i~~f~ 186 (187)
T PF05728_consen 181 QIIAFL 186 (187)
T ss_pred HHHHhh
Confidence 677776
No 139
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.99 E-value=5.3e-07 Score=91.81 Aligned_cols=241 Identities=18% Similarity=0.120 Sum_probs=144.6
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...+..+.|+|+|++|+.... ...|++|++.+++..... ........+.|+|+++.|+....
T Consensus 9 ~~~i~~~~~~~~~~~l~~~~~-----~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------------ 71 (289)
T cd00200 9 TGGVTCVAFSPDGKLLATGSG-----DGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSS------------ 71 (289)
T ss_pred CCCEEEEEEcCCCCEEEEeec-----CcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcC------------
Confidence 345778999999999987742 248999999887633211 11112358899999988877643
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
...|++|++.++.. ...+.. .......+.|+++++.++.... ...+.++++.++.
T Consensus 72 -------~~~i~i~~~~~~~~--~~~~~~--~~~~i~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~--------- 126 (289)
T cd00200 72 -------DKTIRLWDLETGEC--VRTLTG--HTSYVSSVAFSPDGRILSSSSR-----DKTIKVWDVETGK--------- 126 (289)
T ss_pred -------CCeEEEEEcCcccc--eEEEec--cCCcEEEEEEcCCCCEEEEecC-----CCeEEEEECCCcE---------
Confidence 23688888876432 222222 2224567899999877655432 2458888887532
Q ss_pred CCCCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 290 DGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 290 ~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
....+..... .....|++++..++. ... ...|..+|+.++.....+..+ ...+..+.+.+++..++...
T Consensus 127 ----~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~---~~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~ 196 (289)
T cd00200 127 ----CLTTLRGHTDWVNSVAFSPDGTFVAS-SSQ---DGTIKLWDLRTGKCVATLTGH--TGEVNSVAFSPDGEKLLSSS 196 (289)
T ss_pred ----EEEEeccCCCcEEEEEEcCcCCEEEE-EcC---CCcEEEEEccccccceeEecC--ccccceEEECCCcCEEEEec
Confidence 1112221111 112247777655443 332 346888888765533333332 24677888887553444444
Q ss_pred cCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.+ ..|.+||+.+++....+......+..+.+++++. ++++.+ ....++.+|+.++
T Consensus 197 ~~--~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~---~~~~i~i~~~~~~ 251 (289)
T cd00200 197 SD--GTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGY-LLASGS---EDGTIRVWDLRTG 251 (289)
T ss_pred CC--CcEEEEECCCCceecchhhcCCceEEEEEcCCCc-EEEEEc---CCCcEEEEEcCCc
Confidence 44 4788999987766555544455667777888744 444433 3457888888765
No 140
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.98 E-value=2.9e-09 Score=96.99 Aligned_cols=215 Identities=14% Similarity=0.125 Sum_probs=131.4
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcC--hhHHHHHHhcCcEEEEEcc--cCCCCCc----------hh
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFS--VSRTILMRHLGAVFCIANI--RGGGEYG----------EE 528 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~--~~~~~~l~~~G~~v~~~~~--rG~g~~g----------~~ 528 (732)
..+..-++.|++...+++.|+|.|+-|---.. ..|. ..+++..++.|.+|+.||- ||-.--| ..
T Consensus 26 c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~--~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAG 103 (283)
T KOG3101|consen 26 CSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTH--ENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAG 103 (283)
T ss_pred cceEEEEecCCCcccCCcCceEEEecCCcccc--hhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCce
Confidence 56777788898876677799999998864432 2332 2356677779999999984 5532111 12
Q ss_pred HHhcccccCCccHHHHHHHHHHHH---HH--cCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc
Q 004766 529 WHKGGALAKKQNCFDDFISASEYL---IS--AGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK 603 (732)
Q Consensus 529 ~~~~~~~~~~~~~~~D~~~~~~~l---~~--~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~ 603 (732)
|+-....+.-.+.+.=..-+.+.| +. .--+|+.|++|.||||||+-++-...++|.+|+.+.+.+|+.+...--
T Consensus 104 FYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cp- 182 (283)
T KOG3101|consen 104 FYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCP- 182 (283)
T ss_pred eEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCc-
Confidence 222221111111111111122222 22 234799999999999999999888889999999999999999875321
Q ss_pred CCCCC-ccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchH--HHHHHHHHHHhhc
Q 004766 604 FTIGH-AWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH--SLKLLATMQYVLC 680 (732)
Q Consensus 604 ~~~~~-~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~--~~~~~~~l~~~~~ 680 (732)
-|. .+....|+ ++..+ .+|++-+.+++.. -..--+||-.|.+|...+ .| +..+.++-..
T Consensus 183 --WGqKAf~gYLG~--~ka~W---~~yDat~lik~y~-------~~~~~ilIdqG~~D~Fl~-~qLlPe~l~~a~~~--- 244 (283)
T KOG3101|consen 183 --WGQKAFTGYLGD--NKAQW---EAYDATHLIKNYR-------GVGDDILIDQGAADNFLA-EQLLPENLLEACKA--- 244 (283)
T ss_pred --chHHHhhcccCC--ChHHH---hhcchHHHHHhcC-------CCCccEEEecCccchhhh-hhcChHHHHHHhhc---
Confidence 000 11112233 44444 4555554444310 022348999999998766 33 4455444442
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCC
Q 004766 681 TSLENSPQTNPIIGRIERKAGHGV 704 (732)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~gH~~ 704 (732)
+...++.++..++-.|..
T Consensus 245 ------~~~~~v~~r~~~gyDHSY 262 (283)
T KOG3101|consen 245 ------TWQAPVVFRLQEGYDHSY 262 (283)
T ss_pred ------cccccEEEEeecCCCcce
Confidence 235789999999999974
No 141
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.98 E-value=3.1e-09 Score=113.82 Aligned_cols=142 Identities=19% Similarity=0.216 Sum_probs=109.0
Q ss_pred ceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcCh--hHH---HHHHhcCcEEEEEcccCCC
Q 004766 449 FHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSV--SRT---ILMRHLGAVFCIANIRGGG 523 (732)
Q Consensus 449 ~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~--~~~---~~l~~~G~~v~~~~~rG~g 523 (732)
+..+.+.++.+|| ++|..-|++|++. ++.|+++..+-.+-......+.. ... .+++.+||+|+..|+||.+
T Consensus 17 ~~~~~v~V~MRDG-vrL~~dIy~Pa~~---g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~ 92 (563)
T COG2936 17 YIERDVMVPMRDG-VRLAADIYRPAGA---GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRG 92 (563)
T ss_pred eeeeeeeEEecCC-eEEEEEEEccCCC---CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccc
Confidence 5667789999999 9999999999974 89999999883322221111111 111 1344499999999999998
Q ss_pred CCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccc
Q 004766 524 EYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR 600 (732)
Q Consensus 524 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~ 600 (732)
+....|..-. + ...+|-.++|+||.++.+.+ ++||.+|.|++|+...++|+..|--.+|++...+..|+.+
T Consensus 93 ~SeG~~~~~~----~-~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~ 163 (563)
T COG2936 93 GSEGVFDPES----S-REAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYR 163 (563)
T ss_pred cCCcccceec----c-ccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeeccccccccccc
Confidence 7655443221 1 36789999999999999987 7999999999999999999988878899999999988643
No 142
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=98.96 E-value=1.6e-08 Score=101.22 Aligned_cols=231 Identities=16% Similarity=0.117 Sum_probs=149.6
Q ss_pred CCEEEEeEEECCC--CcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 130 GTAALIKVSVSED--AKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 130 ~~~~~~~~~~SPD--G~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
+...++.+.|+|. +.-||-. +...++++|++++-.++.+. ....+++.++|.|+|+.|.-+++|.
T Consensus 216 H~~~v~~~~fhP~~~~~~lat~-----s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~------- 283 (459)
T KOG0272|consen 216 HTSRVGAAVFHPVDSDLNLATA-----SADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDS------- 283 (459)
T ss_pred cccceeeEEEccCCCccceeee-----ccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeeccccc-------
Confidence 4456889999998 4455533 33357899999886665432 2334568899999999999887654
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
.-.+||+.|+.. ++..+.. ..-+.+++|-|||..++-...+. .. .++|+.++.
T Consensus 284 ------------tWRlWD~~tk~E---lL~QEGH-s~~v~~iaf~~DGSL~~tGGlD~---~~--RvWDlRtgr------ 336 (459)
T KOG0272|consen 284 ------------TWRLWDLETKSE---LLLQEGH-SKGVFSIAFQPDGSLAATGGLDS---LG--RVWDLRTGR------ 336 (459)
T ss_pred ------------chhhcccccchh---hHhhccc-ccccceeEecCCCceeeccCccc---hh--heeecccCc------
Confidence 234678877542 4444433 34456899999999876443322 23 355887753
Q ss_pred cccCCCCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCEEE
Q 004766 287 KKRDGLLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQMI 364 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~l~ 364 (732)
+..-|.......+. .|+|+|-+++--+. ....-++|+......-.+..|. ..+..+.+.+ .++++
T Consensus 337 -------~im~L~gH~k~I~~V~fsPNGy~lATgs~----Dnt~kVWDLR~r~~ly~ipAH~--nlVS~Vk~~p~~g~fL 403 (459)
T KOG0272|consen 337 -------CIMFLAGHIKEILSVAFSPNGYHLATGSS----DNTCKVWDLRMRSELYTIPAHS--NLVSQVKYSPQEGYFL 403 (459)
T ss_pred -------EEEEecccccceeeEeECCCceEEeecCC----CCcEEEeeecccccceeccccc--chhhheEecccCCeEE
Confidence 23333333333333 49999977664222 3345667776655333343444 5678888886 47788
Q ss_pred EEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCC
Q 004766 365 VSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFL 416 (732)
Q Consensus 365 ~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~ 416 (732)
++..-| ..+.+|...+...++.+..+.+-|.+++.++|+..+ ..+++.
T Consensus 404 ~TasyD--~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i--~t~s~D 451 (459)
T KOG0272|consen 404 VTASYD--NTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAI--ATSSFD 451 (459)
T ss_pred EEcccC--cceeeecCCCcccchhhcCCccceEEEEeccCCceE--EEeccC
Confidence 888877 467778877778778888778888899999998743 334443
No 143
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.94 E-value=9.8e-08 Score=96.86 Aligned_cols=237 Identities=11% Similarity=0.084 Sum_probs=153.3
Q ss_pred CcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEE
Q 004766 143 AKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYY 222 (732)
Q Consensus 143 G~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 222 (732)
|.+|.|+.. -+||.+++.+|+.+..+..-.-...+.++|||+.++|++.-.. .+.....||.
T Consensus 50 GD~IiFt~~------DdlWe~slk~g~~~ritS~lGVvnn~kf~pdGrkvaf~rv~~~------------ss~~taDly~ 111 (668)
T COG4946 50 GDRIIFTCC------DDLWEYSLKDGKPLRITSGLGVVNNPKFSPDGRKVAFSRVMLG------------SSLQTADLYV 111 (668)
T ss_pred CcEEEEEec------hHHHHhhhccCCeeEEecccceeccccCCCCCcEEEEEEEEec------------CCCccccEEE
Confidence 789999973 2689999999986655443222467899999999999774321 1334557999
Q ss_pred EECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCC-cceEEEEEEeCCCCCCCcccccccCCCCCcEEeeec
Q 004766 223 HFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENC-DPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG 301 (732)
Q Consensus 223 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~ 301 (732)
++...++...++-| + ..+..-+.|+|||+.|+.+..... ..-.++|.+..++.. ..+|--
T Consensus 112 v~~e~Ge~kRiTyf-G---r~fT~VaG~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~--------------~e~Lnl- 172 (668)
T COG4946 112 VPSEDGEAKRITYF-G---RRFTRVAGWIPDGEIIVSTDFHTPFSQWTELYKVNVDGIK--------------TEPLNL- 172 (668)
T ss_pred EeCCCCcEEEEEEe-c---cccceeeccCCCCCEEEEeccCCCcccceeeeEEccCCce--------------eeeccC-
Confidence 99888887776666 2 223334679999999877643322 113678888877642 222221
Q ss_pred ccceEEEEEecCCeEEEEeC----------CCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 302 FDAQYEVIANDDTVFTFLTN----------KDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 302 ~~~~~~~~s~dg~~l~~~s~----------~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
......+-.|| .+++-.| +++.+++||.-. .+++.++.++.-. ..+++..+.+ +++||.+..+|
T Consensus 173 -Gpathiv~~dg-~ivigRntydLP~WK~YkGGtrGklWis~-d~g~tFeK~vdl~--~~vS~PmIV~-~RvYFlsD~eG 246 (668)
T COG4946 173 -GPATHIVIKDG-IIVIGRNTYDLPHWKGYKGGTRGKLWISS-DGGKTFEKFVDLD--GNVSSPMIVG-ERVYFLSDHEG 246 (668)
T ss_pred -CceeeEEEeCC-EEEEccCcccCcccccccCCccceEEEEe-cCCcceeeeeecC--CCcCCceEEc-ceEEEEecccC
Confidence 11222233455 4444333 245577777654 3343355555433 4566677777 89999999999
Q ss_pred eeEEEEEeCCCCceeeecc-cccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 372 KYVLQIRDLKNGSLLHQLP-IEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~~l~-~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
..+||..|++ |+-+++-+ +...-.. ..+.||++++|+-. +.+|.||+++.+
T Consensus 247 ~GnlYSvdld-GkDlrrHTnFtdYY~R--~~nsDGkrIvFq~~-----GdIylydP~td~ 298 (668)
T COG4946 247 VGNLYSVDLD-GKDLRRHTNFTDYYPR--NANSDGKRIVFQNA-----GDIYLYDPETDS 298 (668)
T ss_pred ccceEEeccC-CchhhhcCCchhcccc--ccCCCCcEEEEecC-----CcEEEeCCCcCc
Confidence 9999999997 87655544 2222221 24568998887644 479999998874
No 144
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=98.94 E-value=1.1e-06 Score=94.49 Aligned_cols=241 Identities=13% Similarity=0.101 Sum_probs=154.7
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce-ecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV-EADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~-~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+..++|+--|.+|||.... ..+|-||+..+... +.......+...++.||||+.|+-...+
T Consensus 308 ~~I~t~~~N~tGDWiA~g~~k----lgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eD------------ 371 (893)
T KOG0291|consen 308 QKILTVSFNSTGDWIAFGCSK----LGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAED------------ 371 (893)
T ss_pred ceeeEEEecccCCEEEEcCCc----cceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCC------------
Confidence 346678899999999998754 34788888766552 2222122234789999999988876433
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
.+|.+|+..++- ++....++..-...+.|+.+|+.|+-.+-+++ +..+|+...
T Consensus 372 -------gKVKvWn~~Sgf----C~vTFteHts~Vt~v~f~~~g~~llssSLDGt-----VRAwDlkRY----------- 424 (893)
T KOG0291|consen 372 -------GKVKVWNTQSGF----CFVTFTEHTSGVTAVQFTARGNVLLSSSLDGT-----VRAWDLKRY----------- 424 (893)
T ss_pred -------CcEEEEeccCce----EEEEeccCCCceEEEEEEecCCEEEEeecCCe-----EEeeeeccc-----------
Confidence 368888876542 33333344445678999999999887766544 666777642
Q ss_pred CCCCcEEeeecccceEEEEEec--CCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 291 GLLPFVKLIDGFDAQYEVIAND--DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~~~~~s~d--g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
+..+..+.+.......++.| |. +++.... ..+.|+++++++|+....|-.|+ ..+.++.+.+.+.++++.+
T Consensus 425 --rNfRTft~P~p~QfscvavD~sGe-lV~AG~~--d~F~IfvWS~qTGqllDiLsGHE--gPVs~l~f~~~~~~LaS~S 497 (893)
T KOG0291|consen 425 --RNFRTFTSPEPIQFSCVAVDPSGE-LVCAGAQ--DSFEIFVWSVQTGQLLDILSGHE--GPVSGLSFSPDGSLLASGS 497 (893)
T ss_pred --ceeeeecCCCceeeeEEEEcCCCC-EEEeecc--ceEEEEEEEeecCeeeehhcCCC--CcceeeEEccccCeEEecc
Confidence 23555555444444444434 55 4444433 36899999999998333343443 6677777777666777777
Q ss_pred cCCeeEEEEEeCCCC-ceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 369 SDVKYVLQIRDLKNG-SLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g-~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
-| ..|++||.=+. ...++|.... .+..++++|||+++.++..+ +++-.+|...+
T Consensus 498 WD--kTVRiW~if~s~~~vEtl~i~s-dvl~vsfrPdG~elaVaTld----gqItf~d~~~~ 552 (893)
T KOG0291|consen 498 WD--KTVRIWDIFSSSGTVETLEIRS-DVLAVSFRPDGKELAVATLD----GQITFFDIKEA 552 (893)
T ss_pred cc--ceEEEEEeeccCceeeeEeecc-ceeEEEEcCCCCeEEEEEec----ceEEEEEhhhc
Confidence 77 47888886321 1235555433 35578899999999876444 45666665543
No 145
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.93 E-value=2.9e-07 Score=95.46 Aligned_cols=206 Identities=12% Similarity=0.012 Sum_probs=120.6
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
..+.|+|||+.++.+... ...|++||+.+++.+..........+++|+|||+.+++...+.
T Consensus 76 ~~~~~~~~g~~l~~~~~~----~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~--------------- 136 (300)
T TIGR03866 76 ELFALHPNGKILYIANED----DNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETT--------------- 136 (300)
T ss_pred cEEEECCCCCEEEEEcCC----CCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCC---------------
Confidence 357899999987655321 2379999999877543221122236789999999888764321
Q ss_pred CcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCC
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLP 294 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 294 (732)
..++.++..+...... +. ... ....+.|+|||++|++.... ...++++|+++++.
T Consensus 137 ---~~~~~~d~~~~~~~~~-~~-~~~---~~~~~~~s~dg~~l~~~~~~----~~~v~i~d~~~~~~------------- 191 (300)
T TIGR03866 137 ---NMAHFIDTKTYEIVDN-VL-VDQ---RPRFAEFTADGKELWVSSEI----GGTVSVIDVATRKV------------- 191 (300)
T ss_pred ---CeEEEEeCCCCeEEEE-EE-cCC---CccEEEECCCCCEEEEEcCC----CCEEEEEEcCccee-------------
Confidence 2355566654321111 11 111 12357899999998765422 24588889887431
Q ss_pred cEEeeec--------ccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCE-EEE
Q 004766 295 FVKLIDG--------FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MIV 365 (732)
Q Consensus 295 ~~~l~~~--------~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~-l~~ 365 (732)
...+... ....-..++|+|+.+++.... ..++.++|+++.+ ....+... ..+..+.+++++. |++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~---~~~i~v~d~~~~~-~~~~~~~~--~~~~~~~~~~~g~~l~~ 265 (300)
T TIGR03866 192 IKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGP---ANRVAVVDAKTYE-VLDYLLVG--QRVWQLAFTPDEKYLLT 265 (300)
T ss_pred eeeeeecccccccccCCccceEECCCCCEEEEEcCC---CCeEEEEECCCCc-EEEEEEeC--CCcceEEECCCCCEEEE
Confidence 1111100 000112478999887764432 3468889988765 22222222 3456778887654 444
Q ss_pred EEecCCeeEEEEEeCCCCceeeecccc
Q 004766 366 SYLSDVKYVLQIRDLKNGSLLHQLPIE 392 (732)
Q Consensus 366 ~~~~~g~~~l~~~d~~~g~~~~~l~~~ 392 (732)
....+ ..|.+||+.+++.++++..+
T Consensus 266 ~~~~~--~~i~v~d~~~~~~~~~~~~~ 290 (300)
T TIGR03866 266 TNGVS--NDVSVIDVAALKVIKSIKVG 290 (300)
T ss_pred EcCCC--CeEEEEECCCCcEEEEEEcc
Confidence 43333 47999999988876777654
No 146
>PRK05855 short chain dehydrogenase; Validated
Probab=98.91 E-value=2.1e-08 Score=114.93 Aligned_cols=107 Identities=12% Similarity=0.112 Sum_probs=68.4
Q ss_pred EccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccccc
Q 004766 457 PSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALA 536 (732)
Q Consensus 457 ~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~ 536 (732)
...|| .+|.+..+-+ ...|+||++||..+... .|.. +...|. .||.|+++|+||.|...... .
T Consensus 8 ~~~~g-~~l~~~~~g~------~~~~~ivllHG~~~~~~--~w~~-~~~~L~-~~~~Vi~~D~~G~G~S~~~~------~ 70 (582)
T PRK05855 8 VSSDG-VRLAVYEWGD------PDRPTVVLVHGYPDNHE--VWDG-VAPLLA-DRFRVVAYDVRGAGRSSAPK------R 70 (582)
T ss_pred EeeCC-EEEEEEEcCC------CCCCeEEEEcCCCchHH--HHHH-HHHHhh-cceEEEEecCCCCCCCCCCC------c
Confidence 34588 8887664421 23689999999876542 3443 345566 89999999999987543211 1
Q ss_pred CCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhh
Q 004766 537 KKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 537 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 581 (732)
....+++++.+.+..+++.-.. +.++.++|||+||+++..++.+
T Consensus 71 ~~~~~~~~~a~dl~~~i~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 71 TAAYTLARLADDFAAVIDAVSP-DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred ccccCHHHHHHHHHHHHHHhCC-CCcEEEEecChHHHHHHHHHhC
Confidence 1123455555555554443111 2349999999999888777665
No 147
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.89 E-value=2.3e-08 Score=105.69 Aligned_cols=126 Identities=15% Similarity=0.160 Sum_probs=66.6
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCc------hh---HH---
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG------EE---WH--- 530 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g------~~---~~--- 530 (732)
+++|+..-.| +...+++|+||+-||-.+.+. .|+..... |+++||+|++++.|.+.... .. ..
T Consensus 84 ~~~pa~~~a~--~~~~~~~PvvIFSHGlgg~R~--~yS~~~~e-LAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~ 158 (379)
T PF03403_consen 84 IRIPAYWNAP--LSPPGKFPVVIFSHGLGGSRT--SYSAICGE-LASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYV 158 (379)
T ss_dssp -EESSEET----B--SS-EEEEEEE--TT--TT--TTHHHHHH-HHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---
T ss_pred cccccccCcc--cccCCCCCEEEEeCCCCcchh--hHHHHHHH-HHhCCeEEEEeccCCCceeEEEeccCCCcccccccc
Confidence 5566542222 223378999999999888753 35544445 55599999999999654221 11 10
Q ss_pred ----hccc---ccC-Cc-----------cHHHHHHHHHHHHHH--c------------------CCCCCCcEEEEecChh
Q 004766 531 ----KGGA---LAK-KQ-----------NCFDDFISASEYLIS--A------------------GYTQSRKLCIEGGSNG 571 (732)
Q Consensus 531 ----~~~~---~~~-~~-----------~~~~D~~~~~~~l~~--~------------------~~~d~~~i~i~G~S~G 571 (732)
+... ... .. .-..|+..+++.|.+ . +.+|.++|+++|||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFG 238 (379)
T PF03403_consen 159 VEYLEEEWIPLRDFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFG 238 (379)
T ss_dssp ------EEEE-----GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHH
T ss_pred ccccccceeccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCch
Confidence 0000 000 00 114566777777653 1 3467899999999999
Q ss_pred HHHHHHHHhhCCCeeeEEEEcCC
Q 004766 572 GLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 572 G~l~~~~~~~~p~~f~a~v~~~p 594 (732)
|..++.++.+ ..+|+|+|+.-|
T Consensus 239 GATa~~~l~~-d~r~~~~I~LD~ 260 (379)
T PF03403_consen 239 GATALQALRQ-DTRFKAGILLDP 260 (379)
T ss_dssp HHHHHHHHHH--TT--EEEEES-
T ss_pred HHHHHHHHhh-ccCcceEEEeCC
Confidence 9999998887 478999996554
No 148
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=98.89 E-value=2e-06 Score=82.55 Aligned_cols=243 Identities=11% Similarity=0.080 Sum_probs=147.3
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee-cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE-ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~-~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
-.+..+.||+|.|+|.-++ . ...+.|||.-|.... .......-+-..++||.|+.++..-.++
T Consensus 56 ~Ki~~~~ws~Dsr~ivSaS-q----DGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN----------- 119 (343)
T KOG0286|consen 56 NKIYAMDWSTDSRRIVSAS-Q----DGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDN----------- 119 (343)
T ss_pred cceeeeEecCCcCeEEeec-c----CCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCc-----------
Confidence 4467899999999997543 2 247899998876532 1222222346789999999888753322
Q ss_pred cccCCcccEEEEEECCCCCCC--CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 211 ETDSNLYHEFYYHFLGTKQSE--DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~--~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
...|| ++.+...+ ....-+.+.+.+|.....+.+|++.|. .+ + ....-++|++++.
T Consensus 120 ------~Csiy--~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT-~S--G---D~TCalWDie~g~-------- 177 (343)
T KOG0286|consen 120 ------KCSIY--PLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILT-GS--G---DMTCALWDIETGQ-------- 177 (343)
T ss_pred ------eeEEE--ecccccccccceeeeeecCccceeEEEEEcCCCceEe-cC--C---CceEEEEEcccce--------
Confidence 22344 44433211 112222344566776777777776542 22 2 2457788998853
Q ss_pred cCCCCCcEEeeecccceEE--EEEe-cCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEE
Q 004766 289 RDGLLPFVKLIDGFDAQYE--VIAN-DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIV 365 (732)
Q Consensus 289 ~~~~~~~~~l~~~~~~~~~--~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~ 365 (732)
......+...++. .++| +++.++ +. +-...-.++|+..+...+.+..++ ..|..+.++|++.-++
T Consensus 178 ------~~~~f~GH~gDV~slsl~p~~~ntFv--Sg--~cD~~aklWD~R~~~c~qtF~ghe--sDINsv~ffP~G~afa 245 (343)
T KOG0286|consen 178 ------QTQVFHGHTGDVMSLSLSPSDGNTFV--SG--GCDKSAKLWDVRSGQCVQTFEGHE--SDINSVRFFPSGDAFA 245 (343)
T ss_pred ------EEEEecCCcccEEEEecCCCCCCeEE--ec--ccccceeeeeccCcceeEeecccc--cccceEEEccCCCeee
Confidence 1222233333333 3677 666544 22 223346678888776445554444 6688999999778888
Q ss_pred EEecCCeeEEEEEeCCCCceeeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 366 SYLSDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 366 ~~~~~g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+..+|+ ..+.+|+...+.+.....+ ...+.++.+|..|..|+..|..+ ....+|.-.++
T Consensus 246 tGSDD~--tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~----~c~vWDtlk~e 306 (343)
T KOG0286|consen 246 TGSDDA--TCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDF----TCNVWDTLKGE 306 (343)
T ss_pred ecCCCc--eeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCC----ceeEeeccccc
Confidence 888886 4556677655543333322 45677888888888777667765 47788866654
No 149
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.88 E-value=1.2e-06 Score=89.15 Aligned_cols=222 Identities=17% Similarity=0.126 Sum_probs=136.7
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
+..+.|+|++++|+.+.. ...|++||+.+++.+... ........+.|+|+++.|+...
T Consensus 54 i~~~~~~~~~~~l~~~~~-----~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------------- 112 (289)
T cd00200 54 VRDVAASADGTYLASGSS-----DKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSS---------------- 112 (289)
T ss_pred eeEEEECCCCCEEEEEcC-----CCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEec----------------
Confidence 568899999988887642 258999999987543221 1111347899999976555432
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
....|++|++.+... ...+. .+......+.++|++++++....+ ..++++|+.++.
T Consensus 113 ---~~~~i~~~~~~~~~~--~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~-----~~i~i~d~~~~~------------ 168 (289)
T cd00200 113 ---RDKTIKVWDVETGKC--LTTLR--GHTDWVNSVAFSPDGTFVASSSQD-----GTIKLWDLRTGK------------ 168 (289)
T ss_pred ---CCCeEEEEECCCcEE--EEEec--cCCCcEEEEEEcCcCCEEEEEcCC-----CcEEEEEccccc------------
Confidence 223688888875422 12222 223345688999998887655422 347888887532
Q ss_pred CCcEEeeecc-cceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 293 LPFVKLIDGF-DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 293 ~~~~~l~~~~-~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
....+.... ......|+++++.+++.+. ...|..+|+.++.....+..+. ..+..+.+.+++.+++....+
T Consensus 169 -~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----~~~i~i~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~- 240 (289)
T cd00200 169 -CVATLTGHTGEVNSVAFSPDGEKLLSSSS----DGTIKLWDLSTGKCLGTLRGHE--NGVNSVAFSPDGYLLASGSED- 240 (289)
T ss_pred -cceeEecCccccceEEECCCcCEEEEecC----CCcEEEEECCCCceecchhhcC--CceEEEEEcCCCcEEEEEcCC-
Confidence 122222111 1112248888878877654 3468888887655222222332 467788888766677666645
Q ss_pred eeEEEEEeCCCCceeeecccccceeeEeecccCCcEEE
Q 004766 372 KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVF 409 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~ 409 (732)
..|++|++.+++....+......+..+.++++++.++
T Consensus 241 -~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 277 (289)
T cd00200 241 -GTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLA 277 (289)
T ss_pred -CcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEE
Confidence 4788999877766566654455677788888876554
No 150
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=98.87 E-value=5.3e-08 Score=97.54 Aligned_cols=230 Identities=13% Similarity=0.065 Sum_probs=142.1
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeC--CcEEEEEEecCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHD--SKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspD--g~~l~y~~~~~~~~~~~~ 206 (732)
+...+....+|+|++.||-.+ -+ ..+.||...++..+.... .....+.+.|+|. +..++-.+.|+
T Consensus 174 d~rPis~~~fS~ds~~laT~s-ws----G~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dg------- 241 (459)
T KOG0272|consen 174 DTRPISGCSFSRDSKHLATGS-WS----GLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADG------- 241 (459)
T ss_pred CCCcceeeEeecCCCeEEEee-cC----CceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCC-------
Confidence 345677899999999998553 22 478899998886443222 2224588999998 44666554333
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
.+.+|++.+.. .+-+...+..-+..++|.|+|++|+-.+.+.+ ..++|+.++...
T Consensus 242 ------------tvklw~~~~e~----~l~~l~gH~~RVs~VafHPsG~~L~TasfD~t-----WRlWD~~tk~El---- 296 (459)
T KOG0272|consen 242 ------------TVKLWKLSQET----PLQDLEGHLARVSRVAFHPSGKFLGTASFDST-----WRLWDLETKSEL---- 296 (459)
T ss_pred ------------ceeeeccCCCc----chhhhhcchhhheeeeecCCCceeeecccccc-----hhhcccccchhh----
Confidence 46667765431 22222223334568899999999986665433 456788875311
Q ss_pred cccCCCCCcEEeeecccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEE
Q 004766 287 KKRDGLLPFVKLIDGFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMI 364 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~ 364 (732)
-+..+....+ ..|.+||..+. ....++ ..+ ++|+.++.++-.|-.|. ..|-++.|+++++.+
T Consensus 297 ----------L~QEGHs~~v~~iaf~~DGSL~~-tGGlD~-~~R--vWDlRtgr~im~L~gH~--k~I~~V~fsPNGy~l 360 (459)
T KOG0272|consen 297 ----------LLQEGHSKGVFSIAFQPDGSLAA-TGGLDS-LGR--VWDLRTGRCIMFLAGHI--KEILSVAFSPNGYHL 360 (459)
T ss_pred ----------HhhcccccccceeEecCCCceee-ccCccc-hhh--eeecccCcEEEEecccc--cceeeEeECCCceEE
Confidence 0112222222 24788887543 222221 223 46888887544444444 567889999988888
Q ss_pred EEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEec
Q 004766 365 VSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTS 414 (732)
Q Consensus 365 ~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss 414 (732)
++...| ....+||+..-..+..|+.+..-|+.+-++|+...++++.+-
T Consensus 361 ATgs~D--nt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~Tasy 408 (459)
T KOG0272|consen 361 ATGSSD--NTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASY 408 (459)
T ss_pred eecCCC--CcEEEeeecccccceecccccchhhheEecccCCeEEEEccc
Confidence 888887 467888987444445555556667778888866666655443
No 151
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.86 E-value=7.2e-08 Score=96.03 Aligned_cols=104 Identities=14% Similarity=0.061 Sum_probs=71.5
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchh-HHhcccccCCccHHHHHHHHHHHH-HHcCC
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE-WHKGGALAKKQNCFDDFISASEYL-ISAGY 557 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~-~~~~~~~~~~~~~~~D~~~~~~~l-~~~~~ 557 (732)
..+.+|++||...+ .. .|-..+ .-|+ ....|.++|..|.|...+. |... ....-.-|++.++.- +++++
T Consensus 89 ~~~plVliHGyGAg-~g-~f~~Nf-~~La-~~~~vyaiDllG~G~SSRP~F~~d-----~~~~e~~fvesiE~WR~~~~L 159 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAG-LG-LFFRNF-DDLA-KIRNVYAIDLLGFGRSSRPKFSID-----PTTAEKEFVESIEQWRKKMGL 159 (365)
T ss_pred CCCcEEEEeccchh-HH-HHHHhh-hhhh-hcCceEEecccCCCCCCCCCCCCC-----cccchHHHHHHHHHHHHHcCC
Confidence 34557788884332 21 233333 3356 5999999999997765432 2221 222334677777744 45555
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
+|+.++|||+||||+..+|.+||++++-+|+..|.
T Consensus 160 ---~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 160 ---EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPW 194 (365)
T ss_pred ---cceeEeeccchHHHHHHHHHhChHhhceEEEeccc
Confidence 48999999999999999999999999999988774
No 152
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=98.85 E-value=6.3e-06 Score=78.74 Aligned_cols=243 Identities=11% Similarity=0.066 Sum_probs=151.0
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCC-----ceeccccc-ceeeeeEEEEeCCcEEEEEEecCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQ-----IVEADALS-WFKFSSIAWTHDSKGFFYSRYPAPKEG 203 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g-----~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~ 203 (732)
++-.+...+..+.+.-+.+..+++ ..+.+|++... .++....+ .-..+.++-|+||.+.+-.+
T Consensus 14 h~d~Vt~la~~~~~~~~l~sasrD----k~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~s------- 82 (315)
T KOG0279|consen 14 HTDWVTALAIKIKNSDILVSASRD----KTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSAS------- 82 (315)
T ss_pred CCceEEEEEeecCCCceEEEcccc----eEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEecc-------
Confidence 444566788888888888776542 57888887643 22221111 11247789999998666543
Q ss_pred CCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCc
Q 004766 204 KDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGL 283 (732)
Q Consensus 204 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 283 (732)
....+++||+.+++... .|.+. ..-..++++|||.++|+-.+.+ ..+-+++.-+. +
T Consensus 83 ------------wD~~lrlWDl~~g~~t~--~f~GH--~~dVlsva~s~dn~qivSGSrD-----kTiklwnt~g~-c-- 138 (315)
T KOG0279|consen 83 ------------WDGTLRLWDLATGESTR--RFVGH--TKDVLSVAFSTDNRQIVSGSRD-----KTIKLWNTLGV-C-- 138 (315)
T ss_pred ------------ccceEEEEEecCCcEEE--EEEec--CCceEEEEecCCCceeecCCCc-----ceeeeeeeccc-E--
Confidence 34479999999886553 34332 2345799999999998644332 33666665542 1
Q ss_pred ccccccCCCCCcEEeeecccceE---EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC
Q 004766 284 EGFKKRDGLLPFVKLIDGFDAQY---EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL 360 (732)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~---~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~ 360 (732)
.-.+..+...++ ..|+|+....++++... ...|-++|+++-+-....+.+. ..+..+.+++|
T Consensus 139 -----------k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~--DktvKvWnl~~~~l~~~~~gh~--~~v~t~~vSpD 203 (315)
T KOG0279|consen 139 -----------KYTIHEDSHREWVSCVRFSPNESNPIIVSASW--DKTVKVWNLRNCQLRTTFIGHS--GYVNTVTVSPD 203 (315)
T ss_pred -----------EEEEecCCCcCcEEEEEEcCCCCCcEEEEccC--CceEEEEccCCcchhhcccccc--ccEEEEEECCC
Confidence 111222211222 24899876666665432 3357778888766333444444 67888999998
Q ss_pred CEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 361 NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 361 ~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+.+.....++| ++++||++.++.+..+. ....|.++.++|.. +++... +...+-.+|++++.
T Consensus 204 GslcasGgkdg--~~~LwdL~~~k~lysl~-a~~~v~sl~fspnr--ywL~~a---t~~sIkIwdl~~~~ 265 (315)
T KOG0279|consen 204 GSLCASGGKDG--EAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNR--YWLCAA---TATSIKIWDLESKA 265 (315)
T ss_pred CCEEecCCCCc--eEEEEEccCCceeEecc-CCCeEeeEEecCCc--eeEeec---cCCceEEEeccchh
Confidence 88988877774 78899998787655554 24456677777754 333222 22348888888774
No 153
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.83 E-value=1.8e-06 Score=94.81 Aligned_cols=243 Identities=16% Similarity=0.095 Sum_probs=145.7
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc--eeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI--VEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~--~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
..++....+||||++++.... ...++++++.+++ .+... .....+..++|||||+.|+-.+.
T Consensus 159 ~~sv~~~~fs~~g~~l~~~~~-----~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~---------- 223 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRALAAASS-----DGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSD---------- 223 (456)
T ss_pred cCceEEEEEcCCCCeEEEccC-----CCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecC----------
Confidence 355677899999999887642 1478888886666 22221 12223578999999996665543
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
..+|+.|++..+. . .+.....+..++..++|+|+|+.|+..+.+ ..+.++|+.+++
T Consensus 224 ---------D~tiriwd~~~~~-~--~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D-----~tvriWd~~~~~------- 279 (456)
T KOG0266|consen 224 ---------DKTLRIWDLKDDG-R--NLKTLKGHSTYVTSVAFSPDGNLLVSGSDD-----GTVRIWDVRTGE------- 279 (456)
T ss_pred ---------CceEEEeeccCCC-e--EEEEecCCCCceEEEEecCCCCEEEEecCC-----CcEEEEeccCCe-------
Confidence 3478899983221 2 222233455677899999999665544433 337788887743
Q ss_pred ccCCCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCC--CceEeccCCCCC-ceeEEEEecCCEE
Q 004766 288 KRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN--DWFEVIPEAERD-VLESATAVNLNQM 363 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~-~l~~~~~~~~~~l 363 (732)
+.+.+....+... ..++++|..|+.. .. +..|..+|+.++. ....+.... .. .+..+.+++++..
T Consensus 280 ------~~~~l~~hs~~is~~~f~~d~~~l~s~-s~---d~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~fsp~~~~ 348 (456)
T KOG0266|consen 280 ------CVRKLKGHSDGISGLAFSPDGNLLVSA-SY---DGTIRVWDLETGSKLCLKLLSGAE-NSAPVTSVQFSPNGKY 348 (456)
T ss_pred ------EEEeeeccCCceEEEEECCCCCEEEEc-CC---CccEEEEECCCCceeeeecccCCC-CCCceeEEEECCCCcE
Confidence 2334443333222 2477888776643 22 4568889998876 123344333 23 5777888876555
Q ss_pred EEEEecCCeeEEEEEeCCCCceeeecccccc---eeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 364 IVSYLSDVKYVLQIRDLKNGSLLHQLPIEIG---SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 364 ~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g---~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
++....+ ..+.+|++..+........... .+.....+..+..++ +. .....++.+|+.++
T Consensus 349 ll~~~~d--~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-sg---~~d~~v~~~~~~s~ 411 (456)
T KOG0266|consen 349 LLSASLD--RTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIY-SG---SEDGSVYVWDSSSG 411 (456)
T ss_pred EEEecCC--CeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEE-EE---eCCceEEEEeCCcc
Confidence 5666555 4788899887766555543322 222233344554333 22 22356888888765
No 154
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.83 E-value=4.3e-09 Score=104.52 Aligned_cols=78 Identities=21% Similarity=0.115 Sum_probs=63.3
Q ss_pred cEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEE
Q 004766 512 AVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALA 591 (732)
Q Consensus 512 ~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~ 591 (732)
|.|+++|.||.|..... ..........+|+.+.++.+++.- ..+++.++|+|+||.++..++.++|++++++|+
T Consensus 1 f~vi~~d~rG~g~S~~~----~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH----WDPDFPDYTTDDLAADLEALREAL--GIKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSC----CGSGSCTHCHHHHHHHHHHHHHHH--TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCC----ccCCcccccHHHHHHHHHHHHHHh--CCCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 67999999998864321 113445567899999999998862 234699999999999999999999999999999
Q ss_pred cCCc
Q 004766 592 HVGV 595 (732)
Q Consensus 592 ~~p~ 595 (732)
..++
T Consensus 75 ~~~~ 78 (230)
T PF00561_consen 75 ISPP 78 (230)
T ss_dssp ESES
T ss_pred Eeee
Confidence 8885
No 155
>PTZ00421 coronin; Provisional
Probab=98.83 E-value=1.1e-06 Score=96.41 Aligned_cols=209 Identities=14% Similarity=0.023 Sum_probs=116.9
Q ss_pred CCEEEEeEEECC-CCcEEEEEEeccCCceEEEEEEECCCCce-------ec-ccccceeeeeEEEEeCCcEEEEEEecCC
Q 004766 130 GTAALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIEDQIV-------EA-DALSWFKFSSIAWTHDSKGFFYSRYPAP 200 (732)
Q Consensus 130 ~~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~~g~~-------~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~ 200 (732)
+.-.+..+.||| |+++||-.. +..+|++||+.++.. +. ..........++|+|++..++++..
T Consensus 74 H~~~V~~v~fsP~d~~~LaSgS-----~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs--- 145 (493)
T PTZ00421 74 QEGPIIDVAFNPFDPQKLFTAS-----EDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAG--- 145 (493)
T ss_pred CCCCEEEEEEcCCCCCEEEEEe-----CCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEe---
Confidence 334578999999 888877542 335899999976531 11 1111123477999998754444421
Q ss_pred CCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCC
Q 004766 201 KEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALP 280 (732)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~ 280 (732)
....|.+|++.++.. ...+. .+...+.+++|+|||+.|+..+.+ ..|.++|+.++.
T Consensus 146 ---------------~DgtVrIWDl~tg~~--~~~l~--~h~~~V~sla~spdG~lLatgs~D-----g~IrIwD~rsg~ 201 (493)
T PTZ00421 146 ---------------ADMVVNVWDVERGKA--VEVIK--CHSDQITSLEWNLDGSLLCTTSKD-----KKLNIIDPRDGT 201 (493)
T ss_pred ---------------CCCEEEEEECCCCeE--EEEEc--CCCCceEEEEEECCCCEEEEecCC-----CEEEEEECCCCc
Confidence 234689999987532 22222 233456789999999988765433 348888987642
Q ss_pred CCcccccccCCCCCcEEeeecccc--eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEe
Q 004766 281 EGLEGFKKRDGLLPFVKLIDGFDA--QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAV 358 (732)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~ 358 (732)
....+...... ....|.++++.++...........|..+|+.+...............+....++
T Consensus 202 -------------~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d 268 (493)
T PTZ00421 202 -------------IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFD 268 (493)
T ss_pred -------------EEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEc
Confidence 12222221111 123577777666543322223457888998765421222211111223233444
Q ss_pred cCCEEEEEEe-cCCeeEEEEEeCCCCce
Q 004766 359 NLNQMIVSYL-SDVKYVLQIRDLKNGSL 385 (732)
Q Consensus 359 ~~~~l~~~~~-~~g~~~l~~~d~~~g~~ 385 (732)
++..+++... .+ ..|++|++.+++.
T Consensus 269 ~d~~~L~lggkgD--g~Iriwdl~~~~~ 294 (493)
T PTZ00421 269 EDTNLLYIGSKGE--GNIRCFELMNERL 294 (493)
T ss_pred CCCCEEEEEEeCC--CeEEEEEeeCCce
Confidence 5444444433 34 4788899876654
No 156
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.83 E-value=1.4e-07 Score=87.33 Aligned_cols=187 Identities=15% Similarity=0.120 Sum_probs=118.0
Q ss_pred cEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEccc------CCCCCchhHHhcccccCCc-cH---HHHHHHHHHH
Q 004766 482 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIR------GGGEYGEEWHKGGALAKKQ-NC---FDDFISASEY 551 (732)
Q Consensus 482 P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~r------G~g~~g~~~~~~~~~~~~~-~~---~~D~~~~~~~ 551 (732)
-+||++||-..+.. .+.....+ +..+..-.++|+.+ -+|..+..|.+........ .. +.-..+.+..
T Consensus 4 atIi~LHglGDsg~--~~~~~~~~-l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGS--GWAQFLKQ-LPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIAN 80 (206)
T ss_pred EEEEEEecCCCCCc--cHHHHHHc-CCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHH
Confidence 47999999755432 33222222 44467777777542 3345566677654322211 12 2222333444
Q ss_pred HHHc---CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHh
Q 004766 552 LISA---GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIK 628 (732)
Q Consensus 552 l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~ 628 (732)
|+++ .-++++||+|.|+|+||.+++.++..+|....+++...++..-.. .+ .|
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~-----------~~--~~----------- 136 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRAS-----------IG--LP----------- 136 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccch-----------hh--cc-----------
Confidence 4433 235789999999999999999999988655455544444332100 00 00
Q ss_pred cCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCch
Q 004766 629 YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT 708 (732)
Q Consensus 629 ~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 708 (732)
..... ..++|+|..||+.|+.||..-..+....|+.. +..++++.|++.+|....
T Consensus 137 -----~~~~~--------~~~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~----------~~~~~f~~y~g~~h~~~~-- 191 (206)
T KOG2112|consen 137 -----GWLPG--------VNYTPILLCHGTADPLVPFRFGEKSAQFLKSL----------GVRVTFKPYPGLGHSTSP-- 191 (206)
T ss_pred -----CCccc--------cCcchhheecccCCceeehHHHHHHHHHHHHc----------CCceeeeecCCccccccH--
Confidence 00000 12579999999999999999999999999987 777999999999997653
Q ss_pred HHHHHHHHHHHHHHHH
Q 004766 709 QKMIDEAADRYGFMAK 724 (732)
Q Consensus 709 ~~~~~~~~~~~~fl~~ 724 (732)
+++.++..|+.+
T Consensus 192 ----~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 192 ----QELDDLKSWIKT 203 (206)
T ss_pred ----HHHHHHHHHHHH
Confidence 344566777765
No 157
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.82 E-value=3.9e-07 Score=87.39 Aligned_cols=146 Identities=14% Similarity=0.083 Sum_probs=89.8
Q ss_pred eEEECCCCcEEEEEEecc----CCc---eEEEEEEECCCCceeccccc-ceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 136 KVSVSEDAKYLAYALSYS----GSD---WATIKLMRIEDQIVEADALS-WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~----G~e---~~~i~v~dl~~g~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
.+.|+|+|++|++.++.. +.. ...|+.++..+.......+. ...+..++|+|+|+.|+++...
T Consensus 10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~--------- 80 (194)
T PF08662_consen 10 KLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGS--------- 80 (194)
T ss_pred EEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEcc---------
Confidence 577999999999998732 111 24677777665543222221 1125889999999999887521
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
.+.+|.++++.. + .++..... ....+.|||+|++|++....+. ..++.++|..+..
T Consensus 81 --------~~~~v~lyd~~~---~--~i~~~~~~--~~n~i~wsP~G~~l~~~g~~n~--~G~l~~wd~~~~~------- 136 (194)
T PF08662_consen 81 --------MPAKVTLYDVKG---K--KIFSFGTQ--PRNTISWSPDGRFLVLAGFGNL--NGDLEFWDVRKKK------- 136 (194)
T ss_pred --------CCcccEEEcCcc---c--EeEeecCC--CceEEEECCCCCEEEEEEccCC--CcEEEEEECCCCE-------
Confidence 233567777642 2 33333222 2346899999999998765433 3568888987521
Q ss_pred ccCCCCCcEEeeecccceEEEEEecCCeEEEEeC
Q 004766 288 KRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTN 321 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~ 321 (732)
.+.. ..........|+|||++|+..+.
T Consensus 137 ------~i~~-~~~~~~t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 137 ------KIST-FEHSDATDVEWSPDGRYLATATT 163 (194)
T ss_pred ------Eeec-cccCcEEEEEEcCCCCEEEEEEe
Confidence 0111 11222233469999999887654
No 158
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=98.82 E-value=2.8e-06 Score=79.72 Aligned_cols=227 Identities=15% Similarity=0.134 Sum_probs=133.0
Q ss_pred eEEeCCCCcCCC-------CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCc
Q 004766 118 KVLLDPNTLSDD-------GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSK 190 (732)
Q Consensus 118 ~~l~D~~~l~~~-------~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~ 190 (732)
..|+|.|.-.+. +...+..+.|--||+++. .|+|..+++|||+..-.....-........+.-.|+-.
T Consensus 63 vRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMy-----TgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQt 137 (311)
T KOG0315|consen 63 VRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMY-----TGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQT 137 (311)
T ss_pred eEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEE-----ecCCCceEEEEeccCcccchhccCCCCcceEEecCCcc
Confidence 346676544331 234577888999999986 45677899999998633211111112236677777766
Q ss_pred EEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEE
Q 004766 191 GFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNK 270 (732)
Q Consensus 191 ~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~ 270 (732)
.|+... ....|+.|++++..-..+++ |+....+.++..-|||++++...+. ..
T Consensus 138 eLis~d-------------------qsg~irvWDl~~~~c~~~li---Pe~~~~i~sl~v~~dgsml~a~nnk-----G~ 190 (311)
T KOG0315|consen 138 ELISGD-------------------QSGNIRVWDLGENSCTHELI---PEDDTSIQSLTVMPDGSMLAAANNK-----GN 190 (311)
T ss_pred eEEeec-------------------CCCcEEEEEccCCccccccC---CCCCcceeeEEEcCCCcEEEEecCC-----cc
Confidence 666542 23469999999875544433 2223456789999999999766443 34
Q ss_pred EEEEeCCCCCCCcccccccCCCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCC
Q 004766 271 VYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAER 349 (732)
Q Consensus 271 l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~ 349 (732)
.|++++-+.... .+-.|..++........ ..+|||+++|+-.+.+ ..++.++.++.-.....+. ...
T Consensus 191 cyvW~l~~~~~~-------s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssd----ktv~iwn~~~~~kle~~l~-gh~ 258 (311)
T KOG0315|consen 191 CYVWRLLNHQTA-------SELEPVHKFQAHNGHILRCLLSPDVKYLATCSSD----KTVKIWNTDDFFKLELVLT-GHQ 258 (311)
T ss_pred EEEEEccCCCcc-------ccceEhhheecccceEEEEEECCCCcEEEeecCC----ceEEEEecCCceeeEEEee-cCC
Confidence 888887663211 00111222221111111 2589999988755443 2455565555411122222 222
Q ss_pred CceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecc
Q 004766 350 DVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP 390 (732)
Q Consensus 350 ~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~ 390 (732)
..+=+..++.++..+++...+ ....+|++..|+.++.-.
T Consensus 259 rWvWdc~FS~dg~YlvTassd--~~~rlW~~~~~k~v~qy~ 297 (311)
T KOG0315|consen 259 RWVWDCAFSADGEYLVTASSD--HTARLWDLSAGKEVRQYQ 297 (311)
T ss_pred ceEEeeeeccCccEEEecCCC--CceeecccccCceeeecC
Confidence 456666777767777787777 456778888787644443
No 159
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=98.80 E-value=2.3e-05 Score=81.23 Aligned_cols=117 Identities=9% Similarity=0.102 Sum_probs=72.1
Q ss_pred cccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC--CceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEE
Q 004766 301 GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN--DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIR 378 (732)
Q Consensus 301 ~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~ 378 (732)
++......++|+++.+++- +...+|..+.+.+.. +-..+..+. ..+..++.++|...++..... .++.+|
T Consensus 443 ~y~~s~vAv~~~~~~vaVG----G~Dgkvhvysl~g~~l~ee~~~~~h~--a~iT~vaySpd~~yla~~Da~--rkvv~y 514 (603)
T KOG0318|consen 443 GYESSAVAVSPDGSEVAVG----GQDGKVHVYSLSGDELKEEAKLLEHR--AAITDVAYSPDGAYLAAGDAS--RKVVLY 514 (603)
T ss_pred ccccceEEEcCCCCEEEEe----cccceEEEEEecCCcccceeeeeccc--CCceEEEECCCCcEEEEeccC--CcEEEE
Confidence 3444444688998877752 334456666666543 122344444 678899999966666555444 578899
Q ss_pred eCCCCcee-eecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 379 DLKNGSLL-HQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 379 d~~~g~~~-~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
|+++.+.. ..-.++..-+..++++|+...+ ...|..+ .++.|+++..
T Consensus 515 d~~s~~~~~~~w~FHtakI~~~aWsP~n~~v--ATGSlDt--~Viiysv~kP 562 (603)
T KOG0318|consen 515 DVASREVKTNRWAFHTAKINCVAWSPNNKLV--ATGSLDT--NVIIYSVKKP 562 (603)
T ss_pred EcccCceecceeeeeeeeEEEEEeCCCceEE--Eeccccc--eEEEEEccCh
Confidence 99866541 2234455667788999987633 4445544 5667776654
No 160
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.77 E-value=2e-07 Score=102.09 Aligned_cols=111 Identities=15% Similarity=0.072 Sum_probs=71.9
Q ss_pred CccEEEEEcCCCCccCCCCcC--hhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCC
Q 004766 480 SHPCLLYGYGGFNISVTPSFS--VSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 557 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~--~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 557 (732)
..+.||++||........... .++..+|.++||.|+++|.||.|.....+ .......+++.++++++.+.
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~------~~ddY~~~~i~~al~~v~~~-- 258 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK------TFDDYIRDGVIAALEVVEAI-- 258 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC------ChhhhHHHHHHHHHHHHHHh--
Confidence 345577888865432222222 23456666699999999999977543221 11123445678888888764
Q ss_pred CCCCcEEEEecChhHHHHHH----HHhhC-CCeeeEEEEcCCcccc
Q 004766 558 TQSRKLCIEGGSNGGLLVGA----CINQR-PDLFGCALAHVGVMDM 598 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~----~~~~~-p~~f~a~v~~~p~~d~ 598 (732)
+..+++.++|+|+||.+++. ++..+ |++.++++.....+|.
T Consensus 259 ~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 259 TGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDF 304 (532)
T ss_pred cCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCC
Confidence 45679999999999998632 34444 7788888776665554
No 161
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=98.75 E-value=2.3e-07 Score=89.67 Aligned_cols=241 Identities=12% Similarity=0.065 Sum_probs=145.9
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc---------eeeeeEEEEeCCcEEEEEEecCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW---------FKFSSIAWTHDSKGFFYSRYPAPKEGK 204 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~---------~~~~~~~WspDg~~l~y~~~~~~~~~~ 204 (732)
+...+|||||++|+- |+-..-|.|||..+|+...+-.-. ...-.+.||.|+..++-.+.
T Consensus 216 ~EcA~FSPDgqyLvs-----gSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsq------- 283 (508)
T KOG0275|consen 216 VECARFSPDGQYLVS-----GSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQ------- 283 (508)
T ss_pred hhheeeCCCCceEee-----ccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCc-------
Confidence 456789999999983 444457999999999854322111 11345677777776665433
Q ss_pred CCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 205 DMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
..+|.+|++.|++.-. -|+.. +..-+..+.||.|+.+|+-.+.+.. +.+--+.+|+
T Consensus 284 ------------DGkIKvWri~tG~ClR--rFdrA-HtkGvt~l~FSrD~SqiLS~sfD~t-----vRiHGlKSGK---- 339 (508)
T KOG0275|consen 284 ------------DGKIKVWRIETGQCLR--RFDRA-HTKGVTCLSFSRDNSQILSASFDQT-----VRIHGLKSGK---- 339 (508)
T ss_pred ------------CCcEEEEEEecchHHH--Hhhhh-hccCeeEEEEccCcchhhcccccce-----EEEeccccch----
Confidence 2357778887775321 12211 2234568899999999875543322 3333344432
Q ss_pred cccccCCCCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC--C
Q 004766 285 GFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL--N 361 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~--~ 361 (732)
.++....... ..-..|++||.+++-.+.+ +.+-.++.++.++..+.-+...+..+..+.+.+. .
T Consensus 340 ---------~LKEfrGHsSyvn~a~ft~dG~~iisaSsD----gtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpe 406 (508)
T KOG0275|consen 340 ---------CLKEFRGHSSYVNEATFTDDGHHIISASSD----GTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPE 406 (508)
T ss_pred ---------hHHHhcCccccccceEEcCCCCeEEEecCC----ccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCc
Confidence 1222111110 0112488999988755443 3577778777765444445455677777777763 4
Q ss_pred EEEEEEecCCeeEEEEEeCCCCceeeecccc---cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCC
Q 004766 362 QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE---IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETP 431 (732)
Q Consensus 362 ~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~---~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~ 431 (732)
++++.-+. +.++++++. |+.++.+... .|..-....+|.|..++..... ..+|-+...+|++
T Consensus 407 h~iVCNrs---ntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED----~vlYCF~~~sG~L 471 (508)
T KOG0275|consen 407 HFIVCNRS---NTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGED----GVLYCFSVLSGKL 471 (508)
T ss_pred eEEEEcCC---CeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccC----cEEEEEEeecCce
Confidence 56655443 479999997 8877777654 3333344568888877766544 4688888888864
No 162
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.74 E-value=2.7e-05 Score=80.62 Aligned_cols=240 Identities=12% Similarity=0.084 Sum_probs=128.5
Q ss_pred EECCCCcEEEEEEe-----ccCCceEEEEEEECCCCceeccccc--------ceeeeeEEEEeCCcEEEEEEecCCCCCC
Q 004766 138 SVSEDAKYLAYALS-----YSGSDWATIKLMRIEDQIVEADALS--------WFKFSSIAWTHDSKGFFYSRYPAPKEGK 204 (732)
Q Consensus 138 ~~SPDG~~la~~~~-----~~G~e~~~i~v~dl~~g~~~~~~~~--------~~~~~~~~WspDg~~l~y~~~~~~~~~~ 204 (732)
.+||||+.|..+.. ..|.+.-.|.|+|+++++.+.+..- ......++.|||||+||+.-...
T Consensus 52 ~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p----- 126 (352)
T TIGR02658 52 VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSP----- 126 (352)
T ss_pred eECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCC-----
Confidence 49999998877764 1233345899999999986532211 11124789999999888763221
Q ss_pred CCCCCCcccCCcccEEEEEECCCCCCCC-------eEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCC
Q 004766 205 DMDAGTETDSNLYHEFYYHFLGTKQSED-------ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS 277 (732)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~-------~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 277 (732)
...|-+.++.++..-. ..+|...+.. ....+.||+.+.+...... . .....
T Consensus 127 ------------~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~----~~~~~~Dg~~~~v~~d~~g--~--~~~~~-- 184 (352)
T TIGR02658 127 ------------SPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDT----FFMHCRDGSLAKVGYGTKG--N--PKIKP-- 184 (352)
T ss_pred ------------CCEEEEEECCCCcEEEEEeCCCCcEEEEecCCc----cEEEeecCceEEEEecCCC--c--eEEee--
Confidence 2346666766543111 0111111100 1123455555544432221 1 11000
Q ss_pred CCCCCcccccccCCCCCcEEeeecc-cc--eEEEEEe-cCCeEEEEeCCCCCCceEEEEeCCCCC-----CceEeccCCC
Q 004766 278 ALPEGLEGFKKRDGLLPFVKLIDGF-DA--QYEVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEPN-----DWFEVIPEAE 348 (732)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~--~~~~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~-----~~~~l~~~~~ 348 (732)
..+.... +. ..+.+++ || +.+|.++. +.|+.+|+.+.. .|..+.....
T Consensus 185 ------------------~~vf~~~~~~v~~rP~~~~~dg-~~~~vs~e----G~V~~id~~~~~~~~~~~~~~~~~~~~ 241 (352)
T TIGR02658 185 ------------------TEVFHPEDEYLINHPAYSNKSG-RLVWPTYT----GKIFQIDLSSGDAKFLPAIEAFTEAEK 241 (352)
T ss_pred ------------------eeeecCCccccccCCceEcCCC-cEEEEecC----CeEEEEecCCCcceecceeeecccccc
Confidence 0111110 00 0112455 55 55666765 479999975542 2332221110
Q ss_pred --C---CceeEEEEecC-CEEEEEEec-------CCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecC
Q 004766 349 --R---DVLESATAVNL-NQMIVSYLS-------DVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSF 415 (732)
Q Consensus 349 --~---~~l~~~~~~~~-~~l~~~~~~-------~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~ 415 (732)
+ .-.+.+.+.++ +++|+.... ++-.+|+++|.++++.+.+|.... .+..+.+++|++.+++..+.
T Consensus 242 ~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~-~~~~iavS~Dgkp~lyvtn~- 319 (352)
T TIGR02658 242 ADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGH-EIDSINVSQDAKPLLYALST- 319 (352)
T ss_pred ccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCC-ceeeEEECCCCCeEEEEeCC-
Confidence 1 12334777764 667775432 222589999999998888887654 34477889999833333332
Q ss_pred CCCceEEEEECCCCC
Q 004766 416 LIPGIVYQCNLKTET 430 (732)
Q Consensus 416 ~~p~~~y~~d~~~~~ 430 (732)
....+..+|.++++
T Consensus 320 -~s~~VsViD~~t~k 333 (352)
T TIGR02658 320 -GDKTLYIFDAETGK 333 (352)
T ss_pred -CCCcEEEEECcCCe
Confidence 24568899988875
No 163
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.73 E-value=2.9e-07 Score=96.43 Aligned_cols=144 Identities=19% Similarity=0.223 Sum_probs=106.5
Q ss_pred CCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcC---hhHHHHHHhcCcEEEEEcccC
Q 004766 445 DRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFS---VSRTILMRHLGAVFCIANIRG 521 (732)
Q Consensus 445 ~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~rG 521 (732)
....|.+|...+++.|| . |-.+--.|... +++|+|++.||-..++..+.-+ .....+|+++||-|-.-|.||
T Consensus 42 ~~~gy~~E~h~V~T~Dg-Y-iL~lhRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RG 116 (403)
T KOG2624|consen 42 EKYGYPVEEHEVTTEDG-Y-ILTLHRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRG 116 (403)
T ss_pred HHcCCceEEEEEEccCC-e-EEEEeeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcC
Confidence 34567889999999999 7 44444445442 7899999999998876654433 234667778999999999999
Q ss_pred CCCCchhHHhcccc-c-------CCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCC---eeeEEE
Q 004766 522 GGEYGEEWHKGGAL-A-------KKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD---LFGCAL 590 (732)
Q Consensus 522 ~g~~g~~~~~~~~~-~-------~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v 590 (732)
..|.+.--..... . +..-...|+-|.|+|+.+. +..+++..+|||.|+.....++.++|+ .++..+
T Consensus 117 -n~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~--T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~ 193 (403)
T KOG2624|consen 117 -NTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEK--TGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFI 193 (403)
T ss_pred -cccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHh--ccccceEEEEEEccchhheehhcccchhhhhhheee
Confidence 6676653322211 1 1122357999999999876 567899999999999999999998877 567777
Q ss_pred EcCCcc
Q 004766 591 AHVGVM 596 (732)
Q Consensus 591 ~~~p~~ 596 (732)
+.+|++
T Consensus 194 aLAP~~ 199 (403)
T KOG2624|consen 194 ALAPAA 199 (403)
T ss_pred eecchh
Confidence 777766
No 164
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=98.71 E-value=1.2e-06 Score=94.69 Aligned_cols=196 Identities=15% Similarity=0.167 Sum_probs=127.5
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
+.+.+|+||.+.|+-++ ....+.+|.+.|. ..+++|.+...|.| .+.|+|-|-|.+-
T Consensus 454 Vyg~sFsPd~rfLlScS-------------------ED~svRLWsl~t~--s~~V~y~GH~~PVw--dV~F~P~GyYFat 510 (707)
T KOG0263|consen 454 VYGCSFSPDRRFLLSCS-------------------EDSSVRLWSLDTW--SCLVIYKGHLAPVW--DVQFAPRGYYFAT 510 (707)
T ss_pred eeeeeecccccceeecc-------------------CCcceeeeecccc--eeEEEecCCCccee--eEEecCCceEEEe
Confidence 45778999998887654 3345788888875 34567776555544 5778999988765
Q ss_pred EEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc-cceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC
Q 004766 260 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF-DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 338 (732)
Q Consensus 260 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 338 (732)
.+.+. +.++|..|-.. |.+-..... +.+...|.|+...++ +. .....+-.+|+.++.
T Consensus 511 as~D~---tArLWs~d~~~---------------PlRifaghlsDV~cv~FHPNs~Y~a--TG--SsD~tVRlWDv~~G~ 568 (707)
T KOG0263|consen 511 ASHDQ---TARLWSTDHNK---------------PLRIFAGHLSDVDCVSFHPNSNYVA--TG--SSDRTVRLWDVSTGN 568 (707)
T ss_pred cCCCc---eeeeeecccCC---------------chhhhcccccccceEEECCcccccc--cC--CCCceEEEEEcCCCc
Confidence 54332 46788776532 122222221 222234778665433 33 224457788988887
Q ss_pred CceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCC
Q 004766 339 DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIP 418 (732)
Q Consensus 339 ~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p 418 (732)
..+....| ...+..+.+++.++.+++..+++ .|.+||+.+|+.+..+..+.+.+.+++++.||+.|+. - +..
T Consensus 569 ~VRiF~GH--~~~V~al~~Sp~Gr~LaSg~ed~--~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLas-g-g~D-- 640 (707)
T KOG0263|consen 569 SVRIFTGH--KGPVTALAFSPCGRYLASGDEDG--LIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLAS-G-GAD-- 640 (707)
T ss_pred EEEEecCC--CCceEEEEEcCCCceEeecccCC--cEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEe-c-CCC--
Confidence 44444444 47889999999777777777774 7899999988876666656788889999999985543 2 323
Q ss_pred ceEEEEECCC
Q 004766 419 GIVYQCNLKT 428 (732)
Q Consensus 419 ~~~y~~d~~~ 428 (732)
.++-.||+..
T Consensus 641 nsV~lWD~~~ 650 (707)
T KOG0263|consen 641 NSVRLWDLTK 650 (707)
T ss_pred CeEEEEEchh
Confidence 3455556543
No 165
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=98.70 E-value=8e-06 Score=76.74 Aligned_cols=221 Identities=16% Similarity=0.090 Sum_probs=136.7
Q ss_pred EEEEEEECCCCceecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEE
Q 004766 158 ATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCW 236 (732)
Q Consensus 158 ~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~ 236 (732)
.+|++|.+.||..... .-.......+..+||++.|+... ...|.++++.+.....+.-|
T Consensus 20 hTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~--------------------~qhvRlyD~~S~np~Pv~t~ 79 (311)
T KOG0315|consen 20 HTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAG--------------------NQHVRLYDLNSNNPNPVATF 79 (311)
T ss_pred ceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhcc--------------------CCeeEEEEccCCCCCceeEE
Confidence 7999999999985321 11112346788999999888642 34588999988876656666
Q ss_pred ecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeE
Q 004766 237 KDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVF 316 (732)
Q Consensus 237 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l 316 (732)
+... ..+..+.|--||++++-.+.++. +.++|+....+ -+.+.........+..|+...|
T Consensus 80 e~h~--kNVtaVgF~~dgrWMyTgseDgt-----~kIWdlR~~~~-------------qR~~~~~spVn~vvlhpnQteL 139 (311)
T KOG0315|consen 80 EGHT--KNVTAVGFQCDGRWMYTGSEDGT-----VKIWDLRSLSC-------------QRNYQHNSPVNTVVLHPNQTEL 139 (311)
T ss_pred eccC--CceEEEEEeecCeEEEecCCCce-----EEEEeccCccc-------------chhccCCCCcceEEecCCcceE
Confidence 6543 34568889999999875544332 55567665221 1111111111112355665565
Q ss_pred EEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeec------c
Q 004766 317 TFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQL------P 390 (732)
Q Consensus 317 ~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l------~ 390 (732)
+. .+. .+.|..+|+.....-.+|+|+. +..++++.+.+++..++..... +..|+|++-+++....| .
T Consensus 140 is-~dq---sg~irvWDl~~~~c~~~liPe~-~~~i~sl~v~~dgsml~a~nnk--G~cyvW~l~~~~~~s~l~P~~k~~ 212 (311)
T KOG0315|consen 140 IS-GDQ---SGNIRVWDLGENSCTHELIPED-DTSIQSLTVMPDGSMLAAANNK--GNCYVWRLLNHQTASELEPVHKFQ 212 (311)
T ss_pred Ee-ecC---CCcEEEEEccCCccccccCCCC-CcceeeEEEcCCCcEEEEecCC--ccEEEEEccCCCccccceEhhhee
Confidence 53 332 3468889998765456788876 5889999988876666666554 47899998644322222 2
Q ss_pred cccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 391 IEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 391 ~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
...+.+..--+|||+++|+ +.++. .++++++.++-
T Consensus 213 ah~~~il~C~lSPd~k~la-t~ssd---ktv~iwn~~~~ 247 (311)
T KOG0315|consen 213 AHNGHILRCLLSPDVKYLA-TCSSD---KTVKIWNTDDF 247 (311)
T ss_pred cccceEEEEEECCCCcEEE-eecCC---ceEEEEecCCc
Confidence 2345554556789998665 33442 35777776543
No 166
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.69 E-value=2e-07 Score=86.79 Aligned_cols=227 Identities=17% Similarity=0.095 Sum_probs=129.7
Q ss_pred EEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcc
Q 004766 454 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGG 533 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~ 533 (732)
+.++.+|| ..+++.++.. + ++.+-.+.+-|+++.. ..|-..++.+++++||.|+..|+||.|+.-..-....
T Consensus 8 ~~l~~~DG-~~l~~~~~pA-~----~~~~g~~~va~a~Gv~--~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~ 79 (281)
T COG4757 8 AHLPAPDG-YSLPGQRFPA-D----GKASGRLVVAGATGVG--QYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGS 79 (281)
T ss_pred cccccCCC-ccCccccccC-C----CCCCCcEEecccCCcc--hhHhHHHHHHhhccCceEEEEecccccCCCccccccC
Confidence 45677899 9999987643 2 3455556666777763 3555567788888999999999999987533221111
Q ss_pred cccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCC--ccccccc-------ccC
Q 004766 534 ALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG--VMDMLRY-------HKF 604 (732)
Q Consensus 534 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p--~~d~~~~-------~~~ 604 (732)
......-...||.++++++.+.- -...+..+|||+||.+.+.+.. +|..-.++|.+++ +.-++.. ..+
T Consensus 80 ~~~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~~~-~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~ 156 (281)
T COG4757 80 QWRYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLLGQ-HPKYAAFAVFGSGAGWSGWMGLRERLGAVLLW 156 (281)
T ss_pred ccchhhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeeccccc-CcccceeeEeccccccccchhhhhcccceeec
Confidence 11112234579999999998742 2236889999999988776654 5643333344332 1111110 000
Q ss_pred C----CCCcccc-----ccCCC-CCH----HHHHHHHhcCcccCCCCCCCCC--CCCCCCCCeEEEEeeCCCCCCCchHH
Q 004766 605 T----IGHAWVS-----DFGCS-EEE----EEFYWLIKYSPLHNVRRPWEQN--PDKPFQYPSTLLLTADHDDRVVPLHS 668 (732)
Q Consensus 605 ~----~~~~~~~-----~~g~p-~~~----~~~~~~~~~sp~~~~~~~~~~~--~~~~~~~~p~Li~~g~~D~~v~~~~~ 668 (732)
. .-..|.. -.|.+ +.| .++...-...-+...+.. ..+ +.-..+.+|++.+...+|+-+|+...
T Consensus 157 ~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~-~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~ 235 (281)
T COG4757 157 NLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPA-MRNYRQVYAAVRTPITFSRALDDPWAPPASR 235 (281)
T ss_pred cccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChh-HhHHHHHHHHhcCceeeeccCCCCcCCHHHH
Confidence 0 0011211 11222 111 111111111111111100 000 00002678999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCC----CCCC
Q 004766 669 LKLLATMQYVLCTSLENSPQTNPIIGRIERKA----GHGV 704 (732)
Q Consensus 669 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----gH~~ 704 (732)
.+|+....+ .|++++.++.. ||..
T Consensus 236 d~f~~~y~n------------Apl~~~~~~~~~~~lGH~g 263 (281)
T COG4757 236 DAFASFYRN------------APLEMRDLPRAEGPLGHMG 263 (281)
T ss_pred HHHHHhhhc------------CcccceecCcccCcccchh
Confidence 999888774 47777777665 7864
No 167
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=98.68 E-value=0.00013 Score=71.35 Aligned_cols=243 Identities=14% Similarity=0.078 Sum_probs=144.6
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+..+.+|+||.+|+-+. +.-.|+++|..+|..+... ........+.|......+.+++..
T Consensus 16 ~i~sl~fs~~G~~litss-----~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk------------- 77 (311)
T KOG1446|consen 16 KINSLDFSDDGLLLITSS-----EDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTK------------- 77 (311)
T ss_pred ceeEEEecCCCCEEEEec-----CCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCC-------------
Confidence 466899999999988653 2237999999999865321 111112456777777788887532
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
....|.+..+.+.. .|---+.+...+.++..||-+...+-.+.+ ..|++||+....+
T Consensus 78 ----~d~tIryLsl~dNk----ylRYF~GH~~~V~sL~~sP~~d~FlS~S~D-----~tvrLWDlR~~~c---------- 134 (311)
T KOG1446|consen 78 ----EDDTIRYLSLHDNK----YLRYFPGHKKRVNSLSVSPKDDTFLSSSLD-----KTVRLWDLRVKKC---------- 134 (311)
T ss_pred ----CCCceEEEEeecCc----eEEEcCCCCceEEEEEecCCCCeEEecccC-----CeEEeeEecCCCC----------
Confidence 23468888887643 222223344566789999988654433322 3478888875322
Q ss_pred CCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCC--CCceEeccC-CCCCceeEEEEecCCEEEEEEe
Q 004766 292 LLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP--NDWFEVIPE-AERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~--~~~~~l~~~-~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
.- +..-.......+.|.|-.+++..+ .. .|-.+|+..- ...+..... ........+.++++++.++...
T Consensus 135 ---qg-~l~~~~~pi~AfDp~GLifA~~~~--~~--~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT 206 (311)
T KOG1446|consen 135 ---QG-LLNLSGRPIAAFDPEGLIFALANG--SE--LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLST 206 (311)
T ss_pred ---ce-EEecCCCcceeECCCCcEEEEecC--CC--eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEe
Confidence 11 111122234567887754443332 21 4666676542 223333322 3335567888998766666655
Q ss_pred cCCeeEEEEEeCCCCceeeecccc--cc-eeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIE--IG-SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~--~g-~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.+ +.++++|.=+|..+..+... .+ ..-...++||++-++ +.++ -+++..|++++++
T Consensus 207 ~~--s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl-~gs~---dg~i~vw~~~tg~ 265 (311)
T KOG1446|consen 207 NA--SFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVL-SGSD---DGTIHVWNLETGK 265 (311)
T ss_pred CC--CcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEE-EecC---CCcEEEEEcCCCc
Confidence 55 47888887778876666553 12 112456789997544 3322 3679999999985
No 168
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.68 E-value=4.6e-08 Score=110.77 Aligned_cols=218 Identities=15% Similarity=0.140 Sum_probs=117.7
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCccCC---CCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccccc--CCc
Q 004766 465 IPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT---PSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALA--KKQ 539 (732)
Q Consensus 465 i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~---~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~--~~~ 539 (732)
+..-|+.|+......+.|++|++|||.-.... +.+.. ..++.+++++||.+|||-|- +| |....... .+-
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~--~~~~~~~~vivVt~nYRlg~-~G--fl~~~~~~~~~gN 183 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDG--ASLAASKDVIVVTINYRLGA-FG--FLSLGDLDAPSGN 183 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHT--HHHHHHHTSEEEEE----HH-HH--H-BSSSTTSHBST
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccc--cccccCCCEEEEEecccccc-cc--cccccccccCchh
Confidence 66778889886544589999999998433222 22222 34556699999999999531 11 11111111 133
Q ss_pred cHHHHHHHHHHHHHHc---CCCCCCcEEEEecChhHHHHHHHHhh--CCCeeeEEEEcCCccccc-ccccCC--CCCccc
Q 004766 540 NCFDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGVMDML-RYHKFT--IGHAWV 611 (732)
Q Consensus 540 ~~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p~~d~~-~~~~~~--~~~~~~ 611 (732)
..+.|.+.|++|++++ ---||++|-|+|+|+||..+...+.. ...+|+.+|+.+|..-.. ...... ......
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~~~~~~~~~~~~~~~la 263 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALSPWATSENPEQQAQKLA 263 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTSTTSSBSHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccccccccccccchhhhhhh
Confidence 4689999999999887 23599999999999999999988775 235999999999843211 111100 001122
Q ss_pred cccCCCCC--HHHHHHHHhcCcccCCCCCCCCCCCCCCC---CCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCC
Q 004766 612 SDFGCSEE--EEEFYWLIKYSPLHNVRRPWEQNPDKPFQ---YPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENS 686 (732)
Q Consensus 612 ~~~g~p~~--~~~~~~~~~~sp~~~~~~~~~~~~~~~~~---~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 686 (732)
...|++.. .+..+.|++.++-.-++... ++...... ..|+ + |..+-+..+..+.+.=+
T Consensus 264 ~~lgc~~~~~~~~l~cLR~~~~~~L~~a~~-~~~~~~~~~~~f~Pv--v----Dg~~lp~~p~~~~~~g~---------- 326 (535)
T PF00135_consen 264 KALGCDDSDSSDILECLRSLPAEELLAAQN-KLWPESGFFPPFGPV--V----DGDFLPDSPSELLKSGR---------- 326 (535)
T ss_dssp HHTTSTTSSHHHHHHHHHHS-HHHHHHHHH-CCSTTSSSSSSSSBB--E----BSSSSSS-HHHHHHTTT----------
T ss_pred hhhccccccccchhhhhhhhhccchhhhhh-cccccccccccCCce--e----cccccccCccccccccc----------
Confidence 34566632 35566677655432111100 00000001 1233 1 23355566655443311
Q ss_pred CCCCCEEEEEeCCCCCCC
Q 004766 687 PQTNPIIGRIERKAGHGV 704 (732)
Q Consensus 687 ~~~~~~~~~~~~~~gH~~ 704 (732)
...+|+.+-...++|..+
T Consensus 327 ~~~vP~liG~t~~Eg~~~ 344 (535)
T PF00135_consen 327 FNKVPLLIGSTSDEGSLF 344 (535)
T ss_dssp STTSEEEEEEETBTTHHH
T ss_pred cceeeeecccccccchhh
Confidence 127788888888888754
No 169
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.66 E-value=2.4e-06 Score=95.76 Aligned_cols=241 Identities=13% Similarity=0.055 Sum_probs=131.6
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC-----------Ccee--------cccccceeeeeEEEEeCCc
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED-----------QIVE--------ADALSWFKFSSIAWTHDSK 190 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~-----------g~~~--------~~~~~~~~~~~~~WspDg~ 190 (732)
+...+.-++|||||++||.. +|...|.||+.+. |... .......++..+.||||++
T Consensus 68 h~~sv~CVR~S~dG~~lAsG-----SDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~ 142 (942)
T KOG0973|consen 68 HDGSVNCVRFSPDGSYLASG-----SDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDS 142 (942)
T ss_pred ccCceeEEEECCCCCeEeec-----cCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCcc
Confidence 34567889999999999965 4446677777662 1100 0111222357899999999
Q ss_pred EEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEE
Q 004766 191 GFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNK 270 (732)
Q Consensus 191 ~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~ 270 (732)
.|+-.+.++ .|..|+.-+- +.+.++.. +...+-++.|.|-|+|++-.+.++.
T Consensus 143 ~lvS~s~Dn-------------------sViiwn~~tF--~~~~vl~~--H~s~VKGvs~DP~Gky~ASqsdDrt----- 194 (942)
T KOG0973|consen 143 LLVSVSLDN-------------------SVIIWNAKTF--ELLKVLRG--HQSLVKGVSWDPIGKYFASQSDDRT----- 194 (942)
T ss_pred EEEEecccc-------------------eEEEEccccc--eeeeeeec--ccccccceEECCccCeeeeecCCce-----
Confidence 888775443 5777776665 23334433 3445668999999999987765443
Q ss_pred EEEEeCCCCCCCcccccccCCCCCcEEeeecccc----eE---EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEe
Q 004766 271 VYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA----QY---EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEV 343 (732)
Q Consensus 271 l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~---~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l 343 (732)
|.++.+.+- + ....++..+.. .+ ..|||||++|.....-+++...+-.++-.+=+.-..|
T Consensus 195 ikvwrt~dw--~-----------i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~L 261 (942)
T KOG0973|consen 195 LKVWRTSDW--G-----------IEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDL 261 (942)
T ss_pred EEEEEcccc--e-----------eeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeee
Confidence 444443220 0 01112222221 01 2499999988754433444444445543221111356
Q ss_pred ccCCCCCceeEEEEec----C-CE------------EEEEEecCCeeEEEEEeCCCCceeeeccc----ccceeeEeecc
Q 004766 344 IPEAERDVLESATAVN----L-NQ------------MIVSYLSDVKYVLQIRDLKNGSLLHQLPI----EIGSVNAISAR 402 (732)
Q Consensus 344 ~~~~~~~~l~~~~~~~----~-~~------------l~~~~~~~g~~~l~~~d~~~g~~~~~l~~----~~g~v~~~~~s 402 (732)
+.|.. .++-+.+.+ + .. +++....| ..|.+|... .. +.+-. -.-+|..++++
T Consensus 262 vGH~~--p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqD--rSlSVW~T~--~~-RPl~vi~~lf~~SI~DmsWs 334 (942)
T KOG0973|consen 262 VGHSA--PVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQD--RSLSVWNTA--LP-RPLFVIHNLFNKSIVDMSWS 334 (942)
T ss_pred ecCCC--ceEEEEeChHHhccccccCCccCCCcceEEEEEecCC--ccEEEEecC--CC-CchhhhhhhhcCceeeeeEc
Confidence 66653 333333221 0 11 44555555 357778753 22 33321 14567788899
Q ss_pred cCCcEEEEEEecCCCCceEEEEECC
Q 004766 403 REDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 403 ~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
+||-.|+...-. ++++.+..+
T Consensus 335 pdG~~LfacS~D----GtV~~i~Fe 355 (942)
T KOG0973|consen 335 PDGFSLFACSLD----GTVALIHFE 355 (942)
T ss_pred CCCCeEEEEecC----CeEEEEEcc
Confidence 998765543222 356555543
No 170
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.65 E-value=3.9e-05 Score=83.66 Aligned_cols=257 Identities=17% Similarity=0.135 Sum_probs=151.2
Q ss_pred EeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCc------eEEEE
Q 004766 88 KRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSD------WATIK 161 (732)
Q Consensus 88 ~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e------~~~i~ 161 (732)
++|.++.|....++.+...|++++...+ +.+-|. +. ......+.|++||+.+.|+....... ..+|+
T Consensus 133 pdg~~la~~~s~~G~e~~~l~v~Dl~tg--~~l~d~--i~---~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~ 205 (414)
T PF02897_consen 133 PDGKRLAYSLSDGGSEWYTLRVFDLETG--KFLPDG--IE---NPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVY 205 (414)
T ss_dssp TTSSEEEEEEEETTSSEEEEEEEETTTT--EEEEEE--EE---EEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEE
T ss_pred CCCCEEEEEecCCCCceEEEEEEECCCC--cCcCCc--cc---ccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEE
Confidence 3677888887777888888888887655 333222 11 01112489999999999998666544 68999
Q ss_pred EEECCCCce----e-cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCC---CCCCe
Q 004766 162 LMRIEDQIV----E-ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK---QSEDI 233 (732)
Q Consensus 162 v~dl~~g~~----~-~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~---~~~~~ 233 (732)
.+.+.++.. + .+......+.++.+|+|++.|++.+... .. ...+|+.++..+ ...-.
T Consensus 206 ~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~--------------~~-~s~v~~~d~~~~~~~~~~~~ 270 (414)
T PF02897_consen 206 RHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSG--------------TS-ESEVYLLDLDDGGSPDAKPK 270 (414)
T ss_dssp EEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESS--------------SS-EEEEEEEECCCTTTSS-SEE
T ss_pred EEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEcc--------------cc-CCeEEEEeccccCCCcCCcE
Confidence 999987642 1 1211111135788999999999876543 11 368999999875 22333
Q ss_pred EEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcE-Eeeeccc-ceEEEEEe
Q 004766 234 LCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFV-KLIDGFD-AQYEVIAN 311 (732)
Q Consensus 234 ~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~l~~~~~-~~~~~~s~ 311 (732)
++....+.. ...+.. .|..+++.++.+. ....|+.++++... ...+. .+..... .....++.
T Consensus 271 ~l~~~~~~~--~~~v~~--~~~~~yi~Tn~~a-~~~~l~~~~l~~~~-----------~~~~~~~l~~~~~~~~l~~~~~ 334 (414)
T PF02897_consen 271 LLSPREDGV--EYYVDH--HGDRLYILTNDDA-PNGRLVAVDLADPS-----------PAEWWTVLIPEDEDVSLEDVSL 334 (414)
T ss_dssp EEEESSSS---EEEEEE--ETTEEEEEE-TT--TT-EEEEEETTSTS-----------GGGEEEEEE--SSSEEEEEEEE
T ss_pred EEeCCCCce--EEEEEc--cCCEEEEeeCCCC-CCcEEEEecccccc-----------cccceeEEcCCCCceeEEEEEE
Confidence 444433222 222222 2666666665433 46789999988732 11233 3333322 23445667
Q ss_pred cCCeEEEEeCCCCCCceEEEEeCC-CCCCceEeccCCCCCceeEEEEec-CCEEEEEEecCC-eeEEEEEeCCCCce
Q 004766 312 DDTVFTFLTNKDAPKYKIIRVDLK-EPNDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDV-KYVLQIRDLKNGSL 385 (732)
Q Consensus 312 dg~~l~~~s~~~~~~~~l~~~d~~-~~~~~~~l~~~~~~~~l~~~~~~~-~~~l~~~~~~~g-~~~l~~~d~~~g~~ 385 (732)
.+++|++...+++ ..+|.++++. +.. ...+.... ...+.++.... .+.+++....-. .+.++.+|+++|+.
T Consensus 335 ~~~~Lvl~~~~~~-~~~l~v~~~~~~~~-~~~~~~p~-~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~ 408 (414)
T PF02897_consen 335 FKDYLVLSYRENG-SSRLRVYDLDDGKE-SREIPLPE-AGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL 408 (414)
T ss_dssp ETTEEEEEEEETT-EEEEEEEETT-TEE-EEEEESSS-SSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred ECCEEEEEEEECC-ccEEEEEECCCCcE-EeeecCCc-ceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence 7889888777655 6789999998 433 22222222 23344444332 256776666554 46999999998875
No 171
>PTZ00420 coronin; Provisional
Probab=98.65 E-value=1.4e-05 Score=88.45 Aligned_cols=207 Identities=13% Similarity=-0.017 Sum_probs=114.4
Q ss_pred CCEEEEeEEECCC-CcEEEEEEeccCCceEEEEEEECCCCce-ec--------ccccceeeeeEEEEeCCcEEEEEEecC
Q 004766 130 GTAALIKVSVSED-AKYLAYALSYSGSDWATIKLMRIEDQIV-EA--------DALSWFKFSSIAWTHDSKGFFYSRYPA 199 (732)
Q Consensus 130 ~~~~~~~~~~SPD-G~~la~~~~~~G~e~~~i~v~dl~~g~~-~~--------~~~~~~~~~~~~WspDg~~l~y~~~~~ 199 (732)
+...+..++|||+ +++||-. ++..+|+|||+.++.. .. ..........++|+|++..++.+..
T Consensus 73 H~~~V~~lafsP~~~~lLASg-----S~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS-- 145 (568)
T PTZ00420 73 HTSSILDLQFNPCFSEILASG-----SEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSG-- 145 (568)
T ss_pred CCCCEEEEEEcCCCCCEEEEE-----eCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEe--
Confidence 3345789999997 6666643 2335899999986431 10 0111123578999999988765532
Q ss_pred CCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCC
Q 004766 200 PKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
....|.+|++.++.. +..+.. ...+.+++|+|||+.|+....+ ..|.++|+.++
T Consensus 146 ----------------~DgtIrIWDl~tg~~--~~~i~~---~~~V~SlswspdG~lLat~s~D-----~~IrIwD~Rsg 199 (568)
T PTZ00420 146 ----------------FDSFVNIWDIENEKR--AFQINM---PKKLSSLKWNIKGNLLSGTCVG-----KHMHIIDPRKQ 199 (568)
T ss_pred ----------------CCCeEEEEECCCCcE--EEEEec---CCcEEEEEECCCCCEEEEEecC-----CEEEEEECCCC
Confidence 234688999987642 122222 2245689999999988655432 34888898774
Q ss_pred CCCcccccccCCCCCcEEeeecccc--eEE----EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC-CCCce
Q 004766 280 PEGLEGFKKRDGLLPFVKLIDGFDA--QYE----VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-ERDVL 352 (732)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~~~~--~~~----~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~l 352 (732)
. ....+...... ... .++++++.|+..+..+.....|.++|+.........+... ....+
T Consensus 200 ~-------------~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L 266 (568)
T PTZ00420 200 E-------------IASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPL 266 (568)
T ss_pred c-------------EEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccce
Confidence 2 11222211111 111 1346777666544333223468888987533122222221 11222
Q ss_pred eEEEEecCCEEEEEEecCCeeEEEEEeCCCCc
Q 004766 353 ESATAVNLNQMIVSYLSDVKYVLQIRDLKNGS 384 (732)
Q Consensus 353 ~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~ 384 (732)
..+.-.+++.+|+....| ..|++|++..+.
T Consensus 267 ~p~~D~~tg~l~lsGkGD--~tIr~~e~~~~~ 296 (568)
T PTZ00420 267 IPHYDESTGLIYLIGKGD--GNCRYYQHSLGS 296 (568)
T ss_pred EEeeeCCCCCEEEEEECC--CeEEEEEccCCc
Confidence 222222335677777666 478888886554
No 172
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.64 E-value=0.0001 Score=74.07 Aligned_cols=227 Identities=13% Similarity=0.086 Sum_probs=133.2
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEE-eCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWT-HDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~Ws-pDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
++.|.+....|.|+ +..+. +|+.++.++++........ ..+++.. +|| .|+++...
T Consensus 4 gp~~d~~~g~l~~~-D~~~~---~i~~~~~~~~~~~~~~~~~--~~G~~~~~~~g-~l~v~~~~---------------- 60 (246)
T PF08450_consen 4 GPVWDPRDGRLYWV-DIPGG---RIYRVDPDTGEVEVIDLPG--PNGMAFDRPDG-RLYVADSG---------------- 60 (246)
T ss_dssp EEEEETTTTEEEEE-ETTTT---EEEEEETTTTEEEEEESSS--EEEEEEECTTS-EEEEEETT----------------
T ss_pred ceEEECCCCEEEEE-EcCCC---EEEEEECCCCeEEEEecCC--CceEEEEccCC-EEEEEEcC----------------
Confidence 68899966666555 44333 7999999998754322222 2566777 564 56665321
Q ss_pred CcccEEEEEECCCCCCCCeEEEecC--C-CCeeEEEeEEecCCcEEEEEEecCCc--ce--EEEEEEeCCCCCCCccccc
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWKDP--E-HPKYIFSGHVTEDGQYLVMCIEENCD--PV--NKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~~~--~-~~~~~~~~~~SpDg~~l~~~~~~~~~--~~--~~l~~~d~~~~~~~~~~~~ 287 (732)
.+.+.+..++..+ .+.+.. . ......+++++|||+ |++....... .. ..+|.++..+ .
T Consensus 61 ----~~~~~d~~~g~~~--~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~~-~------- 125 (246)
T PF08450_consen 61 ----GIAVVDPDTGKVT--VLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPDG-K------- 125 (246)
T ss_dssp ----CEEEEETTTTEEE--EEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETTS-E-------
T ss_pred ----ceEEEecCCCcEE--EEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCCC-e-------
Confidence 1344476665332 333331 1 233455889999999 5555433221 11 6799998773 2
Q ss_pred ccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC----CceEeccCCCC-CceeEEEEecCC
Q 004766 288 KRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN----DWFEVIPEAER-DVLESATAVNLN 361 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~----~~~~l~~~~~~-~~l~~~~~~~~~ 361 (732)
...+..+.... -..|+|||+.||+.... ..+|++++++... ..+.+...... ....++.+..++
T Consensus 126 -------~~~~~~~~~~pNGi~~s~dg~~lyv~ds~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G 195 (246)
T PF08450_consen 126 -------VTVVADGLGFPNGIAFSPDGKTLYVADSF---NGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDG 195 (246)
T ss_dssp -------EEEEEEEESSEEEEEEETTSSEEEEEETT---TTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS
T ss_pred -------EEEEecCcccccceEECCcchheeecccc---cceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCC
Confidence 22333332221 12589999988875432 4579999886432 11223222211 246788888778
Q ss_pred EEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeec-ccCCcEEEEEEe
Q 004766 362 QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISA-RREDSVVFISFT 413 (732)
Q Consensus 362 ~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~-s~d~~~l~~~~s 413 (732)
.|++..... .+|.+++.+ |+.+..|.+|...++.+.+ -++.++|+++.+
T Consensus 196 ~l~va~~~~--~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 196 NLWVADWGG--GRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp -EEEEEETT--TEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEEEB
T ss_pred CEEEEEcCC--CEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEEeC
Confidence 888876644 589999997 9888888888445666665 467788888754
No 173
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.63 E-value=0.00019 Score=71.73 Aligned_cols=265 Identities=12% Similarity=0.123 Sum_probs=139.4
Q ss_pred EeEEECCCCcEEEEEEeccCCc-eEEEEEEECCCCcee--c-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSD-WATIKLMRIEDQIVE--A-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e-~~~i~v~dl~~g~~~--~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
+.+.|+|++++| |+....|.+ ...-|-+|-.+|+.. . ..+.+.....++.++||+.|+.+....
T Consensus 43 tyl~~~~~~~~L-Y~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~----------- 110 (346)
T COG2706 43 TYLAVNPDQRHL-YVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHS----------- 110 (346)
T ss_pred ceEEECCCCCEE-EEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccC-----------
Confidence 477899999866 555544332 133445555557632 1 112222225688999998777654322
Q ss_pred cccCCcccEEEEEECCCCCCCC---eEEEe-cC--C---CCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSED---ILCWK-DP--E---HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPE 281 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~---~~v~~-~~--~---~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 281 (732)
..|-+..+.....-. .++.. +. . +..-.....++|||++|+...- + ..++++++++.+..
T Consensus 111 -------g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DL-G---~Dri~~y~~~dg~L 179 (346)
T COG2706 111 -------GSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDL-G---TDRIFLYDLDDGKL 179 (346)
T ss_pred -------ceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeec-C---CceEEEEEcccCcc
Confidence 123333332211100 00110 00 0 0111235678999999976643 2 35688888876431
Q ss_pred CcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC--CceEe--ccCC--CCCceeEE
Q 004766 282 GLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN--DWFEV--IPEA--ERDVLESA 355 (732)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~--~~~~l--~~~~--~~~~l~~~ 355 (732)
. ......+..+.......|.|+|+..|+++..+. ...++.++-..++ +.+.+ +|++ .......+
T Consensus 180 ~---------~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~s-tV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaI 249 (346)
T COG2706 180 T---------PADPAEVKPGAGPRHIVFHPNGKYAYLVNELNS-TVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAI 249 (346)
T ss_pred c---------cccccccCCCCCcceEEEcCCCcEEEEEeccCC-EEEEEEEcCCCceEEEeeeeccCccccCCCCceeEE
Confidence 1 111112334555556679999988887776543 4455556554343 11211 2222 12345678
Q ss_pred EEecCCEEEEEEecCCeeEE--EEEeCCCCceeeeccc-c-cce-eeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 356 TAVNLNQMIVSYLSDVKYVL--QIRDLKNGSLLHQLPI-E-IGS-VNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 356 ~~~~~~~l~~~~~~~g~~~l--~~~d~~~g~~~~~l~~-~-~g~-v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.+++++++++.+.+.- ..| +.+|.++|+. +.+.. + .|. -..+.++++++.|++.-+. ..--.+|..|..+|.
T Consensus 250 his~dGrFLYasNRg~-dsI~~f~V~~~~g~L-~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~-sd~i~vf~~d~~TG~ 326 (346)
T COG2706 250 HISPDGRFLYASNRGH-DSIAVFSVDPDGGKL-ELVGITPTEGQFPRDFNINPSGRFLIAANQK-SDNITVFERDKETGR 326 (346)
T ss_pred EECCCCCEEEEecCCC-CeEEEEEEcCCCCEE-EEEEEeccCCcCCccceeCCCCCEEEEEccC-CCcEEEEEEcCCCce
Confidence 8888766555555443 344 4455554542 33321 1 232 3456778888866655443 334788999998884
Q ss_pred CceEEEE
Q 004766 431 PEMKIFR 437 (732)
Q Consensus 431 ~~~~~l~ 437 (732)
++++.
T Consensus 327 --L~~~~ 331 (346)
T COG2706 327 --LTLLG 331 (346)
T ss_pred --EEecc
Confidence 65554
No 174
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=98.62 E-value=6.4e-05 Score=81.23 Aligned_cols=238 Identities=15% Similarity=0.144 Sum_probs=144.6
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
+...++.|--+.||...+ +| .++++++.+-..+. ..+...+...++|.--|.+|++.+.
T Consensus 268 vtaa~fH~~t~~lvvgFs-sG----~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~--------------- 327 (893)
T KOG0291|consen 268 VTAAAFHKGTNLLVVGFS-SG----EFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCS--------------- 327 (893)
T ss_pred eeeeeccCCceEEEEEec-CC----eeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCC---------------
Confidence 334556665555544332 11 33445554444321 2333334578899888999999742
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
+-.++.+|...+. ..|+.-..+..-+..+++||||++|+-...+ .+|-+||...+-
T Consensus 328 ---klgQLlVweWqsE----sYVlKQQgH~~~i~~l~YSpDgq~iaTG~eD-----gKVKvWn~~Sgf------------ 383 (893)
T KOG0291|consen 328 ---KLGQLLVWEWQSE----SYVLKQQGHSDRITSLAYSPDGQLIATGAED-----GKVKVWNTQSGF------------ 383 (893)
T ss_pred ---ccceEEEEEeecc----ceeeeccccccceeeEEECCCCcEEEeccCC-----CcEEEEeccCce------------
Confidence 2335655655432 1344332233345688999999999765543 447777876532
Q ss_pred CCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 293 LPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 293 ~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
+....+....... ..|+.+|+.++ .+..+ +.+-.+|+....+.++++.+.+ .....++..+.+.+++....+.
T Consensus 384 -C~vTFteHts~Vt~v~f~~~g~~ll-ssSLD---GtVRAwDlkRYrNfRTft~P~p-~QfscvavD~sGelV~AG~~d~ 457 (893)
T KOG0291|consen 384 -CFVTFTEHTSGVTAVQFTARGNVLL-SSSLD---GTVRAWDLKRYRNFRTFTSPEP-IQFSCVAVDPSGELVCAGAQDS 457 (893)
T ss_pred -EEEEeccCCCceEEEEEEecCCEEE-EeecC---CeEEeeeecccceeeeecCCCc-eeeeEEEEcCCCCEEEeeccce
Confidence 2333333222222 23777776555 34333 3688899987777888876653 5566666666567777776664
Q ss_pred eeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEEC
Q 004766 372 KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNL 426 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~ 426 (732)
-.|++|++++|+.+..|..+.|.|++++++++++.| ...|+.. ++.+||.
T Consensus 458 -F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~L--aS~SWDk--TVRiW~i 507 (893)
T KOG0291|consen 458 -FEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLL--ASGSWDK--TVRIWDI 507 (893)
T ss_pred -EEEEEEEeecCeeeehhcCCCCcceeeEEccccCeE--Eeccccc--eEEEEEe
Confidence 689999999999877788778999999999999844 3445554 3444443
No 175
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=98.62 E-value=1.2e-05 Score=76.14 Aligned_cols=230 Identities=12% Similarity=0.072 Sum_probs=134.4
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
.-++....|+|-..-+.++.+ |+ .+|++||+..++...........-.+.|||||.++++...+.
T Consensus 64 ~~svdql~w~~~~~d~~atas--~d--k~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD----------- 128 (313)
T KOG1407|consen 64 TDSVDQLCWDPKHPDLFATAS--GD--KTIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDD----------- 128 (313)
T ss_pred CcchhhheeCCCCCcceEEec--CC--ceEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcc-----------
Confidence 346677888887766655542 33 489999999998664332222235689999999999875433
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
.|-..+..+-. .+-+++ ...+...+.|.-++...++....++ -+|.-++ .
T Consensus 129 --------~it~id~r~~~----~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~---v~ILsyp--s------------ 178 (313)
T KOG1407|consen 129 --------RITFIDARTYK----IVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGC---VEILSYP--S------------ 178 (313)
T ss_pred --------cEEEEEecccc----eeehhc-ccceeeeeeecCCCCEEEEecCCce---EEEEecc--c------------
Confidence 23333332221 111111 1223446778855555444332222 3333332 2
Q ss_pred CCCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEec
Q 004766 291 GLLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLS 369 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~ 369 (732)
.+|+..+......=+. .|+|+|++|+.-+. ...+-++|++...+.+ .++.- +..+..++++-+++++++.++
T Consensus 179 -Lkpv~si~AH~snCicI~f~p~GryfA~GsA----DAlvSLWD~~ELiC~R-~isRl-dwpVRTlSFS~dg~~lASaSE 251 (313)
T KOG1407|consen 179 -LKPVQSIKAHPSNCICIEFDPDGRYFATGSA----DALVSLWDVDELICER-CISRL-DWPVRTLSFSHDGRMLASASE 251 (313)
T ss_pred -cccccccccCCcceEEEEECCCCceEeeccc----cceeeccChhHhhhhe-eeccc-cCceEEEEeccCcceeeccCc
Confidence 1123333332211122 38999998886332 3345667776554333 33333 578889999877889988888
Q ss_pred CCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecC
Q 004766 370 DVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSF 415 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~ 415 (732)
| .-|-+.+.++|..+.+|+- .+....+++.|....|+|..+..
T Consensus 252 D--h~IDIA~vetGd~~~eI~~-~~~t~tVAWHPk~~LLAyA~ddk 294 (313)
T KOG1407|consen 252 D--HFIDIAEVETGDRVWEIPC-EGPTFTVAWHPKRPLLAYACDDK 294 (313)
T ss_pred c--ceEEeEecccCCeEEEeec-cCCceeEEecCCCceeeEEecCC
Confidence 8 4566677788987777763 34444678888887777666553
No 176
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.62 E-value=1.5e-07 Score=95.62 Aligned_cols=113 Identities=10% Similarity=0.030 Sum_probs=79.7
Q ss_pred CCccEEEEEcCCCCccCCCCcChhH-HHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSR-TILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 557 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 557 (732)
...|++|++||..+.. ...|...+ ..++...++.|+++|+++++... +..+. ..-...-+++...+++|.+...
T Consensus 34 ~~~p~vilIHG~~~~~-~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~--~~~~~v~~~la~~l~~L~~~~g 108 (275)
T cd00707 34 PSRPTRFIIHGWTSSG-EESWISDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAV--NNTRVVGAELAKFLDFLVDNTG 108 (275)
T ss_pred CCCCcEEEEcCCCCCC-CCcHHHHHHHHHHhcCCCEEEEEECccccccC--hHHHH--HhHHHHHHHHHHHHHHHHHhcC
Confidence 4578999999976654 22333333 34666468999999999863322 11110 1111223577788888887755
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
.+.+++.++|||+||.+++.++.+.|++++.+++..|..
T Consensus 109 ~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 109 LSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred CChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 677899999999999999999999999999998876653
No 177
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.62 E-value=1.1e-07 Score=86.23 Aligned_cols=218 Identities=13% Similarity=0.037 Sum_probs=121.9
Q ss_pred EEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCc
Q 004766 483 CLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRK 562 (732)
Q Consensus 483 ~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~ 562 (732)
.|+.+-|..|+. ...|.+.+.++....-+.++..|.||-|..-..-. .-.-+.-.+|..+|++-+... +-.+
T Consensus 44 ~iLlipGalGs~-~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~R----kf~~~ff~~Da~~avdLM~aL---k~~~ 115 (277)
T KOG2984|consen 44 YILLIPGALGSY-KTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPER----KFEVQFFMKDAEYAVDLMEAL---KLEP 115 (277)
T ss_pred eeEecccccccc-cccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcc----cchHHHHHHhHHHHHHHHHHh---CCCC
Confidence 566677877754 45777777666654459999999999664211100 111122357888888877664 4478
Q ss_pred EEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc--ccccccccC---CCCCccccccCCC----CCHHHHHH----H-Hh
Q 004766 563 LCIEGGSNGGLLVGACINQRPDLFGCALAHVGV--MDMLRYHKF---TIGHAWVSDFGCS----EEEEEFYW----L-IK 628 (732)
Q Consensus 563 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~--~d~~~~~~~---~~~~~~~~~~g~p----~~~~~~~~----~-~~ 628 (732)
+.|+|+|-||..++.+++++++...-.|.+.+- ++-...+.+ -....|...--.| -.++.+.. + ..
T Consensus 116 fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~ 195 (277)
T KOG2984|consen 116 FSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDV 195 (277)
T ss_pred eeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHH
Confidence 999999999999999999999866554444331 221111111 0111232211111 01121111 1 01
Q ss_pred cCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCch
Q 004766 629 YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT 708 (732)
Q Consensus 629 ~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 708 (732)
..-++....+.---...+++++|+||+||..|+.|+-.|.--+-..+. -.++.++|.++|.+.-.-
T Consensus 196 v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~--------------~a~~~~~peGkHn~hLry 261 (277)
T KOG2984|consen 196 VDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKS--------------LAKVEIHPEGKHNFHLRY 261 (277)
T ss_pred HHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcc--------------cceEEEccCCCcceeeec
Confidence 111111110000000012489999999999999999777543333322 248889999999886432
Q ss_pred HHHHHHHHHHHHHHHH
Q 004766 709 QKMIDEAADRYGFMAK 724 (732)
Q Consensus 709 ~~~~~~~~~~~~fl~~ 724 (732)
. .+....+.+||.+
T Consensus 262 a--~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 262 A--KEFNKLVLDFLKS 275 (277)
T ss_pred h--HHHHHHHHHHHhc
Confidence 2 2344567788764
No 178
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.61 E-value=2.9e-05 Score=82.26 Aligned_cols=283 Identities=14% Similarity=0.085 Sum_probs=135.6
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
....+||||+++ |+.+++| .|.++|+.+++.+.....+....++++|+||++++.+..
T Consensus 40 ~~~~~s~Dgr~~-yv~~rdg----~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~----------------- 97 (369)
T PF02239_consen 40 AGLKFSPDGRYL-YVANRDG----TVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANY----------------- 97 (369)
T ss_dssp EEEE-TT-SSEE-EEEETTS----EEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEE-----------------
T ss_pred eEEEecCCCCEE-EEEcCCC----eEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEec-----------------
Confidence 456799999985 4555544 689999999997654333334478999999999977643
Q ss_pred CcccEEEEEECCCCCCCCeEEEe-cCC--CCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWK-DPE--HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~-~~~--~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
.+..+..++..+.+.-..+-.. .+. .......+.-||++...++...+ ..++|++|.+...
T Consensus 98 -~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd----~~~I~vVdy~d~~----------- 161 (369)
T PF02239_consen 98 -EPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKD----TGEIWVVDYSDPK----------- 161 (369)
T ss_dssp -ETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETT----TTEEEEEETTTSS-----------
T ss_pred -CCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEcc----CCeEEEEEecccc-----------
Confidence 3346777776654211111000 000 01123456668888866666543 3579999977631
Q ss_pred CCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCC-C--CceeEEEEecCCEEEEEEe
Q 004766 292 LLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE-R--DVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~-~--~~l~~~~~~~~~~l~~~~~ 368 (732)
....+.+..+....-..|+|+|++++...+. ..++..+|+++++ ...++.-.. . .....+ ..+....+....
T Consensus 162 ~~~~~~i~~g~~~~D~~~dpdgry~~va~~~---sn~i~viD~~~~k-~v~~i~~g~~p~~~~~~~~-php~~g~vw~~~ 236 (369)
T PF02239_consen 162 NLKVTTIKVGRFPHDGGFDPDGRYFLVAANG---SNKIAVIDTKTGK-LVALIDTGKKPHPGPGANF-PHPGFGPVWATS 236 (369)
T ss_dssp CEEEEEEE--TTEEEEEE-TTSSEEEEEEGG---GTEEEEEETTTTE-EEEEEE-SSSBEETTEEEE-EETTTEEEEEEE
T ss_pred ccceeeecccccccccccCcccceeeecccc---cceeEEEeeccce-EEEEeeccccccccccccc-cCCCcceEEeec
Confidence 0001111111111112589999888775553 2378888887765 222222110 0 111111 112122222222
Q ss_pred cCCee--------EEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEeec
Q 004766 369 SDVKY--------VLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETI 440 (732)
Q Consensus 369 ~~g~~--------~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~ 440 (732)
..+.. .+.+++..+-+.+++|..+.+.+ .+..+|+++.+++....-..-..+..+|..+.+ ....
T Consensus 237 ~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~gl-Fi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~----~~~~-- 309 (369)
T PF02239_consen 237 GLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGL-FIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLK----VVKT-- 309 (369)
T ss_dssp BSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTE----EEE---
T ss_pred cccceecccccCCccccchhhcCeEEEEEECCCCcc-eeecCCCCccEEeeccCCCCCceEEEEECcCcc----eeEE--
Confidence 22211 22234544455667777653333 566789999998873222235789999987652 2111
Q ss_pred CCCCCC-CCceEEEEEEEccCCCeeEEEEEEEc
Q 004766 441 IPGFDR-SEFHVHQVFVPSKDGSTKIPMFIVSK 472 (732)
Q Consensus 441 ~~~~~~-~~~~~~~~~~~s~dG~~~i~~~~~~p 472 (732)
+.+ ....+-.++| ++|| .++-..+...
T Consensus 310 ---i~~~~~~~~~h~ef-~~dG-~~v~vS~~~~ 337 (369)
T PF02239_consen 310 ---ITPGPGKRVVHMEF-NPDG-KEVWVSVWDG 337 (369)
T ss_dssp ---HHHHHT--EEEEEE--TTS-SEEEEEEE--
T ss_pred ---EeccCCCcEeccEE-CCCC-CEEEEEEecC
Confidence 100 0112444555 4678 7776665543
No 179
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.61 E-value=3.7e-05 Score=81.09 Aligned_cols=255 Identities=13% Similarity=0.040 Sum_probs=125.8
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECC-CCcee--cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIE-DQIVE--ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~-~g~~~--~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
.+.+||||++|+.+... ...|.+++++ +|... ...........++++|||+.||.+...
T Consensus 39 ~l~~spd~~~lyv~~~~----~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~-------------- 100 (330)
T PRK11028 39 PMVISPDKRHLYVGVRP----EFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYN-------------- 100 (330)
T ss_pred cEEECCCCCEEEEEECC----CCcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcC--------------
Confidence 57899999988655321 2367777775 45421 111111123679999999988776421
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
...|..+++.+.......+...+. ......+.++|||+++++... . ...|+++|+.+.. .+... .
T Consensus 101 ----~~~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~~p~g~~l~v~~~-~---~~~v~v~d~~~~g-~l~~~-----~ 165 (330)
T PRK11028 101 ----ANCVSVSPLDKDGIPVAPIQIIEG-LEGCHSANIDPDNRTLWVPCL-K---EDRIRLFTLSDDG-HLVAQ-----E 165 (330)
T ss_pred ----CCeEEEEEECCCCCCCCceeeccC-CCcccEeEeCCCCCEEEEeeC-C---CCEEEEEEECCCC-ccccc-----C
Confidence 235667776533211111111111 111245779999999876543 2 2468888876521 00000 0
Q ss_pred CCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCC--CCC--CceEe--ccCC--CCCceeEEEEecCCEEE
Q 004766 293 LPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK--EPN--DWFEV--IPEA--ERDVLESATAVNLNQMI 364 (732)
Q Consensus 293 ~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~--~~~--~~~~l--~~~~--~~~~l~~~~~~~~~~l~ 364 (732)
........+.......|+|||+.+|+. +... ..|..++++ ++. ....+ +|.. .......+.++++++.+
T Consensus 166 ~~~~~~~~g~~p~~~~~~pdg~~lyv~-~~~~--~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~l 242 (330)
T PRK11028 166 PAEVTTVEGAGPRHMVFHPNQQYAYCV-NELN--SSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHL 242 (330)
T ss_pred CCceecCCCCCCceEEECCCCCEEEEE-ecCC--CEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEE
Confidence 000111112222334689999888765 4332 356666654 232 11111 1211 01112246677765544
Q ss_pred EEEecCCeeEEEEEeCCC-Cceee---ecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 365 VSYLSDVKYVLQIRDLKN-GSLLH---QLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 365 ~~~~~~g~~~l~~~d~~~-g~~~~---~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+...+. ...|.+|+++. +..++ .+... .....+.+++||+.++++-.. ..--.+|.+|..++
T Consensus 243 yv~~~~-~~~I~v~~i~~~~~~~~~~~~~~~~-~~p~~~~~~~dg~~l~va~~~-~~~v~v~~~~~~~g 308 (330)
T PRK11028 243 YACDRT-ASLISVFSVSEDGSVLSFEGHQPTE-TQPRGFNIDHSGKYLIAAGQK-SHHISVYEIDGETG 308 (330)
T ss_pred EEecCC-CCeEEEEEEeCCCCeEEEeEEEecc-ccCCceEECCCCCEEEEEEcc-CCcEEEEEEcCCCC
Confidence 444332 24677777642 22212 12111 122356778999988875432 22234444454555
No 180
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.61 E-value=2.6e-05 Score=92.33 Aligned_cols=239 Identities=16% Similarity=0.148 Sum_probs=134.7
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCC----ce----ecccccceeeeeEEEEeC-CcEEEEEEecCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQ----IV----EADALSWFKFSSIAWTHD-SKGFFYSRYPAPKE 202 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g----~~----~~~~~~~~~~~~~~WspD-g~~l~y~~~~~~~~ 202 (732)
..+..+.|||||++||-+. ....|+|||+.+. .. ............++|+|. ++.|+.+.
T Consensus 484 ~~V~~i~fs~dg~~latgg-----~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~------ 552 (793)
T PLN00181 484 NLVCAIGFDRDGEFFATAG-----VNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSN------ 552 (793)
T ss_pred CcEEEEEECCCCCEEEEEe-----CCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEe------
Confidence 3467889999999988542 2358999997642 10 000011123467899885 55555443
Q ss_pred CCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec-CCcEEEEEEecCCcceEEEEEEeCCCCCC
Q 004766 203 GKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPE 281 (732)
Q Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 281 (732)
....|.+|++.+++. +..+. .+...+.+++|+| ||.+|+..+.+ ..+.++|+.++.
T Consensus 553 -------------~Dg~v~lWd~~~~~~--~~~~~--~H~~~V~~l~~~p~~~~~L~Sgs~D-----g~v~iWd~~~~~- 609 (793)
T PLN00181 553 -------------FEGVVQVWDVARSQL--VTEMK--EHEKRVWSIDYSSADPTLLASGSDD-----GSVKLWSINQGV- 609 (793)
T ss_pred -------------CCCeEEEEECCCCeE--EEEec--CCCCCEEEEEEcCCCCCEEEEEcCC-----CEEEEEECCCCc-
Confidence 234688999876532 12222 2334567899997 77776655432 347888887632
Q ss_pred CcccccccCCCCCcEEeeecccceEEEEE-ecCCeEEEEeCCCCCCceEEEEeCCCCC-CceEeccCCCCCceeEEEEec
Q 004766 282 GLEGFKKRDGLLPFVKLIDGFDAQYEVIA-NDDTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEAERDVLESATAVN 359 (732)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~s-~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~~~~~~ 359 (732)
....+..........|. ++|..|+..+. ++.|..+|+.+.. ....+..+. ..+..+.+.+
T Consensus 610 ------------~~~~~~~~~~v~~v~~~~~~g~~latgs~----dg~I~iwD~~~~~~~~~~~~~h~--~~V~~v~f~~ 671 (793)
T PLN00181 610 ------------SIGTIKTKANICCVQFPSESGRSLAFGSA----DHKVYYYDLRNPKLPLCTMIGHS--KTVSYVRFVD 671 (793)
T ss_pred ------------EEEEEecCCCeEEEEEeCCCCCEEEEEeC----CCeEEEEECCCCCccceEecCCC--CCEEEEEEeC
Confidence 12222211111112353 45666554332 3478899987654 233444443 4577788775
Q ss_pred CCEEEEEEecCCeeEEEEEeCCCC------ceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 360 LNQMIVSYLSDVKYVLQIRDLKNG------SLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 360 ~~~l~~~~~~~g~~~l~~~d~~~g------~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+..+++...++ .|.+||+..+ +.+..+..+...+..+.+++++..++ +.+. -..++.|+....
T Consensus 672 -~~~lvs~s~D~--~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~la-sgs~---D~~v~iw~~~~~ 740 (793)
T PLN00181 672 -SSTLVSSSTDN--TLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIA-TGSE---TNEVFVYHKAFP 740 (793)
T ss_pred -CCEEEEEECCC--EEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEE-EEeC---CCEEEEEECCCC
Confidence 45566666664 6888988632 22334443344455667778776443 3222 246777776544
No 181
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.60 E-value=1.9e-06 Score=80.32 Aligned_cols=157 Identities=13% Similarity=-0.009 Sum_probs=90.8
Q ss_pred EEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcE
Q 004766 484 LLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKL 563 (732)
Q Consensus 484 vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i 563 (732)
|+.+||..++. ...|.+-+..-+... +.|-.++. .....++-+..++.-+.. +| +.+
T Consensus 1 v~IvhG~~~s~-~~HW~~wl~~~l~~~-~~V~~~~~------------------~~P~~~~W~~~l~~~i~~--~~-~~~ 57 (171)
T PF06821_consen 1 VLIVHGYGGSP-PDHWQPWLERQLENS-VRVEQPDW------------------DNPDLDEWVQALDQAIDA--ID-EPT 57 (171)
T ss_dssp EEEE--TTSST-TTSTHHHHHHHHTTS-EEEEEC--------------------TS--HHHHHHHHHHCCHC---T-TTE
T ss_pred CEEeCCCCCCC-ccHHHHHHHHhCCCC-eEEecccc------------------CCCCHHHHHHHHHHHHhh--cC-CCe
Confidence 46677754443 356665555555534 66666554 111233444444333332 33 459
Q ss_pred EEEecChhHHHHHHHH-hhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCC
Q 004766 564 CIEGGSNGGLLVGACI-NQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQN 642 (732)
Q Consensus 564 ~i~G~S~GG~l~~~~~-~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~ 642 (732)
.++|||.|..+++.++ .+....++++++.+|+..-..... . .....+.. .|...
T Consensus 58 ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~--~--~~~~~f~~-------------~p~~~-------- 112 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPF--P--PELDGFTP-------------LPRDP-------- 112 (171)
T ss_dssp EEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCC--T--CGGCCCTT-------------SHCCH--------
T ss_pred EEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccch--h--hhcccccc-------------Ccccc--------
Confidence 9999999999999999 777889999999999843200000 0 00111111 01111
Q ss_pred CCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCch
Q 004766 643 PDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT 708 (732)
Q Consensus 643 ~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 708 (732)
...|.+++.++||+.||+..+.+++++|.. ++...+++||+.....
T Consensus 113 -----l~~~~~viaS~nDp~vp~~~a~~~A~~l~a---------------~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 113 -----LPFPSIVIASDNDPYVPFERAQRLAQRLGA---------------ELIILGGGGHFNAASG 158 (171)
T ss_dssp -----HHCCEEEEEETTBSSS-HHHHHHHHHHHT----------------EEEEETS-TTSSGGGT
T ss_pred -----cCCCeEEEEcCCCCccCHHHHHHHHHHcCC---------------CeEECCCCCCcccccC
Confidence 122448999999999999999999999863 7888899999876543
No 182
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.59 E-value=2e-06 Score=103.85 Aligned_cols=106 Identities=12% Similarity=0.116 Sum_probs=64.8
Q ss_pred CccEEEEEcCCCCccCCCCcChh--HHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHH----HHHHHHHHH
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVS--RTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDD----FISASEYLI 553 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~--~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D----~~~~~~~l~ 553 (732)
..|.||++||.......+...+. +..+|.++||.|+++|+. ... .. .. . ...++.| +.++++.+.
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G-~~~--~~--~~-~---~~~~l~~~i~~l~~~l~~v~ 136 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFG-SPD--KV--EG-G---MERNLADHVVALSEAIDTVK 136 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCC-CCC--hh--Hc-C---ccCCHHHHHHHHHHHHHHHH
Confidence 45889999998766554443321 345665599999999962 221 11 00 0 0123333 344444443
Q ss_pred HcCCCCCCcEEEEecChhHHHHHHHHhhC-CCeeeEEEEcCCccc
Q 004766 554 SAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVGVMD 597 (732)
Q Consensus 554 ~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~~f~a~v~~~p~~d 597 (732)
+.. .+++-++|+|+||.++..++..+ |++++.+|+....+|
T Consensus 137 ~~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 137 DVT---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred Hhh---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 332 24799999999999998777644 568888876444433
No 183
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.59 E-value=3.6e-07 Score=90.98 Aligned_cols=219 Identities=17% Similarity=0.148 Sum_probs=82.8
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCC-CCCchhHHhcccccCCccHHHHHHHHHHHHHHcC--C
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGG-GEYGEEWHKGGALAKKQNCFDDFISASEYLISAG--Y 557 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~-g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~ 557 (732)
.-+||++-|-...-....|.+.+...|...||.|+.+..+-+ ++||..-. .++.+|+.+|++||+... .
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL--------~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL--------DRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H--------HHHHHHHHHHHHHHHHHS---
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh--------hhHHHHHHHHHHHHHHhhccc
Confidence 347888866444344445666677778768999999999863 45554322 346799999999999873 2
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhC-C----CeeeEEEEcCCcccccccccCCC--------------------C-----
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQR-P----DLFGCALAHVGVMDMLRYHKFTI--------------------G----- 607 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~-p----~~f~a~v~~~p~~d~~~~~~~~~--------------------~----- 607 (732)
...++|+++|||-|---++.++... + ....++|+++|+.|-........ +
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp 184 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILP 184 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG-
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceee
Confidence 3578999999999999999888863 2 56999999999998532211000 0
Q ss_pred Cccccc--cCCCCCHHHHHHHHhcCcc------------cCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchH-HHHHH
Q 004766 608 HAWVSD--FGCSEEEEEFYWLIKYSPL------------HNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH-SLKLL 672 (732)
Q Consensus 608 ~~~~~~--~g~p~~~~~~~~~~~~sp~------------~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~-~~~~~ 672 (732)
..+... |+.|-.. ++++--.+|- ..+++.+ ..+..|+|++.|.+|..||.+. -.++.
T Consensus 185 ~~~~~~~~~~~PiTA--~Rf~SL~s~~gdDD~FSSDL~de~l~~tf------G~v~~plLvl~Sg~DEyvP~~vdk~~Ll 256 (303)
T PF08538_consen 185 REFTPLVFYDTPITA--YRFLSLASPGGDDDYFSSDLSDERLKKTF------GKVSKPLLVLYSGKDEYVPPWVDKEALL 256 (303)
T ss_dssp ---GGTTT-SS---H--HHHHT-S-SSHHHHTHHHHHTT-HHHHTG------GG--S-EEEEEE--TT------------
T ss_pred ccccccccCCCcccH--HHHHhccCCCCcccccCCCCCHHHHHHHh------ccCCCceEEEecCCCceecccccccccc
Confidence 000000 0122111 1111111111 0000000 0266799999999999999876 56788
Q ss_pred HHHHHhhcCCCCCCCCC-CCEEEEEeCCCCCCCCCchHH--HHHHHHHHHHHH
Q 004766 673 ATMQYVLCTSLENSPQT-NPIIGRIERKAGHGVGLPTQK--MIDEAADRYGFM 722 (732)
Q Consensus 673 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~--~~~~~~~~~~fl 722 (732)
++++.+. ..+ ....-.+.||+.|....+..+ +.....++..||
T Consensus 257 ~rw~~a~-------~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl 302 (303)
T PF08538_consen 257 ERWKAAT-------NPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFL 302 (303)
T ss_dssp -----------------------------------------------------
T ss_pred ccccccc-------ccccccccccccccccccccccccccccccccccccccC
Confidence 8888761 111 122356889999998765432 123344556665
No 184
>PTZ00420 coronin; Provisional
Probab=98.58 E-value=0.0002 Score=79.38 Aligned_cols=245 Identities=9% Similarity=-0.041 Sum_probs=131.1
Q ss_pred ECCCCcEEEEEEec-cCCceEEEEEEECCCCceecc-cccceeeeeEEEEeC-CcEEEEEEecCCCCCCCCCCCCcccCC
Q 004766 139 VSEDAKYLAYALSY-SGSDWATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHD-SKGFFYSRYPAPKEGKDMDAGTETDSN 215 (732)
Q Consensus 139 ~SPDG~~la~~~~~-~G~e~~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspD-g~~l~y~~~~~~~~~~~~~~~~~~~~~ 215 (732)
++..++++|+..+. +|+....|.++++.....+.. ......+..++|+|+ +..|+..+.
T Consensus 34 ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~------------------ 95 (568)
T PTZ00420 34 IACSSGFVAVPWEVEGGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSE------------------ 95 (568)
T ss_pred EeeCCCeEEEEEEcCCCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeC------------------
Confidence 45557788887754 344456788888765543321 111223578999997 565555432
Q ss_pred cccEEEEEECCCCCC------CCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 216 LYHEFYYHFLGTKQS------EDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 216 ~~~~v~~~~lgt~~~------~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
...|.+|++.++.. ..+..+.. +...+..+.|+|++..++++++.. ..|.++|+.++.
T Consensus 96 -DgtIrIWDi~t~~~~~~~i~~p~~~L~g--H~~~V~sVaf~P~g~~iLaSgS~D----gtIrIWDl~tg~--------- 159 (568)
T PTZ00420 96 -DLTIRVWEIPHNDESVKEIKDPQCILKG--HKKKISIIDWNPMNYYIMCSSGFD----SFVNIWDIENEK--------- 159 (568)
T ss_pred -CCeEEEEECCCCCccccccccceEEeec--CCCcEEEEEECCCCCeEEEEEeCC----CeEEEEECCCCc---------
Confidence 23688888865321 11112222 233566899999999887655432 347788987642
Q ss_pred CCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEE---EecCCEEEEE
Q 004766 290 DGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESAT---AVNLNQMIVS 366 (732)
Q Consensus 290 ~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~---~~~~~~l~~~ 366 (732)
....+..........|+++|..|+..+ . ...|..+|+.++.....+..+........+. +++++..+++
T Consensus 160 ----~~~~i~~~~~V~SlswspdG~lLat~s-~---D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlT 231 (568)
T PTZ00420 160 ----RAFQINMPKKLSSLKWNIKGNLLSGTC-V---GKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILS 231 (568)
T ss_pred ----EEEEEecCCcEEEEEECCCCCEEEEEe-c---CCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEE
Confidence 111221111111225899998775433 2 2368889998876444444444211111222 2243444444
Q ss_pred EecCC--eeEEEEEeCCC-Cceeeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 367 YLSDV--KYVLQIRDLKN-GSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 367 ~~~~g--~~~l~~~d~~~-g~~~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
...+. ..+|.+||+.+ ++.+..+.++ .+.+. ...+++.+.++++..+ -..++.|++..+
T Consensus 232 tG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~-p~~D~~tg~l~lsGkG---D~tIr~~e~~~~ 295 (568)
T PTZ00420 232 TGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLI-PHYDESTGLIYLIGKG---DGNCRYYQHSLG 295 (568)
T ss_pred EEcCCCCccEEEEEECCCCCCceEEEEecCCccceE-EeeeCCCCCEEEEEEC---CCeEEEEEccCC
Confidence 44332 24799999874 3443343333 23221 2233444555555443 245777776655
No 185
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=98.57 E-value=1.5e-05 Score=75.45 Aligned_cols=241 Identities=11% Similarity=0.039 Sum_probs=136.6
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc---cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL---SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~---~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
..+..+.|.-||++||-. +-..++.|++++.+..+.+-. .......+.|.|-..-++++..
T Consensus 21 ~~v~Sv~wn~~g~~lasg-----s~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas----------- 84 (313)
T KOG1407|consen 21 QKVHSVAWNCDGTKLASG-----SFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATAS----------- 84 (313)
T ss_pred hcceEEEEcccCceeeec-----ccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEec-----------
Confidence 346688999999999944 333578888888775443211 1112346789887655655542
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
....|.+|++-++.....+... +-...+.|||||+++++...+ .+|-.+|..+-.
T Consensus 85 -------~dk~ir~wd~r~~k~~~~i~~~-----~eni~i~wsp~g~~~~~~~kd-----D~it~id~r~~~-------- 139 (313)
T KOG1407|consen 85 -------GDKTIRIWDIRSGKCTARIETK-----GENINITWSPDGEYIAVGNKD-----DRITFIDARTYK-------- 139 (313)
T ss_pred -------CCceEEEEEeccCcEEEEeecc-----CcceEEEEcCCCCEEEEecCc-----ccEEEEEecccc--------
Confidence 2335788887665433222211 122468999999999876532 346667765521
Q ss_pred cCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 289 RDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 289 ~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
........+...-..|. ..+.++|+++-.+ ...|+.++ .-+....+-.|. ...-.+.+.++++.+++..
T Consensus 140 -----~~~~~~~~~e~ne~~w~-~~nd~Fflt~GlG-~v~ILsyp--sLkpv~si~AH~--snCicI~f~p~GryfA~Gs 208 (313)
T KOG1407|consen 140 -----IVNEEQFKFEVNEISWN-NSNDLFFLTNGLG-CVEILSYP--SLKPVQSIKAHP--SNCICIEFDPDGRYFATGS 208 (313)
T ss_pred -----eeehhcccceeeeeeec-CCCCEEEEecCCc-eEEEEecc--ccccccccccCC--cceEEEEECCCCceEeecc
Confidence 00000001111112355 4556788887433 45566665 333334555554 3344567778777777777
Q ss_pred cCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.| ..+.+||++.--..+.++.-...|..++++-||..|+ +. ..-.-+=..+..+|.
T Consensus 209 AD--AlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lA-Sa---SEDh~IDIA~vetGd 264 (313)
T KOG1407|consen 209 AD--ALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLA-SA---SEDHFIDIAEVETGD 264 (313)
T ss_pred cc--ceeeccChhHhhhheeeccccCceEEEEeccCcceee-cc---CccceEEeEecccCC
Confidence 77 4677889863222344544456677788888988654 22 222334444566663
No 186
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.55 E-value=4.6e-07 Score=86.27 Aligned_cols=138 Identities=19% Similarity=0.167 Sum_probs=97.5
Q ss_pred CCCCCceEEEEEEE-cc--CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEccc
Q 004766 444 FDRSEFHVHQVFVP-SK--DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIR 520 (732)
Q Consensus 444 ~~~~~~~~~~~~~~-s~--dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~r 520 (732)
|....|..+.+.+. +. .-+-..|..|+.|.. .|.+|+|++.||.+-. ..|-.+++..+++.||+|++++.-
T Consensus 9 F~~G~~~~~~~~Vd~s~~~~~spPkpLlI~tP~~---~G~yPVilF~HG~~l~---ns~Ys~lL~HIASHGfIVVAPQl~ 82 (307)
T PF07224_consen 9 FETGKYKTKLFNVDTSSNSSPSPPKPLLIVTPSE---AGTYPVILFLHGFNLY---NSFYSQLLAHIASHGFIVVAPQLY 82 (307)
T ss_pred eecCCceeEEEeecCCCCCCCCCCCCeEEecCCc---CCCccEEEEeechhhh---hHHHHHHHHHHhhcCeEEEechhh
Confidence 34445555555552 11 111467899999986 5899999999997644 345556677788899999999975
Q ss_pred CCCCCchhHHhcccccCCccHHHHHHHHHHHHHHc--------CCCCCCcEEEEecChhHHHHHHHHhhC-CC-eeeEEE
Q 004766 521 GGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA--------GYTQSRKLCIEGGSNGGLLVGACINQR-PD-LFGCAL 590 (732)
Q Consensus 521 G~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--------~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~-~f~a~v 590 (732)
... ...+...+++...+++||-+. --.+.+++++.|||.||-.+.+++..+ .+ .|.|.|
T Consensus 83 ~~~-----------~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLI 151 (307)
T PF07224_consen 83 TLF-----------PPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALI 151 (307)
T ss_pred ccc-----------CCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhhee
Confidence 421 134456678889999999753 124678999999999999999988865 23 378888
Q ss_pred EcCCcccc
Q 004766 591 AHVGVMDM 598 (732)
Q Consensus 591 ~~~p~~d~ 598 (732)
..-|+.-.
T Consensus 152 GiDPV~G~ 159 (307)
T PF07224_consen 152 GIDPVAGT 159 (307)
T ss_pred cccccCCC
Confidence 77776543
No 187
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=98.54 E-value=0.0001 Score=73.27 Aligned_cols=244 Identities=10% Similarity=0.087 Sum_probs=137.9
Q ss_pred CCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee-cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 129 DGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE-ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 129 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~-~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
+++-++....||-||.+|| .|+=...|.|+...+|... +...+-....-+.|.|-+..|+..+.+.
T Consensus 104 gHKDSVt~~~FshdgtlLA-----TGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DG-------- 170 (399)
T KOG0296|consen 104 GHKDSVTCCSFSHDGTLLA-----TGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDG-------- 170 (399)
T ss_pred CCCCceEEEEEccCceEEE-----ecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCC--------
Confidence 3556788999999999998 3333358999999988743 2111111235578999888777765433
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
.+|.|.+..+ ....++.+... -...-.++||||.|+....++ .|.++++.++..- -.+.
T Consensus 171 -----------svWmw~ip~~--~~~kv~~Gh~~--~ct~G~f~pdGKr~~tgy~dg-----ti~~Wn~ktg~p~-~~~~ 229 (399)
T KOG0296|consen 171 -----------SVWMWQIPSQ--ALCKVMSGHNS--PCTCGEFIPDGKRILTGYDDG-----TIIVWNPKTGQPL-HKIT 229 (399)
T ss_pred -----------cEEEEECCCc--ceeeEecCCCC--CcccccccCCCceEEEEecCc-----eEEEEecCCCcee-EEec
Confidence 5999999875 23346655332 123456899999997665433 3677777764210 0000
Q ss_pred ccCCC--CCc-------EEeeec-ccceEEEEEecCCeEEEEeCC------------------------------CCCCc
Q 004766 288 KRDGL--LPF-------VKLIDG-FDAQYEVIANDDTVFTFLTNK------------------------------DAPKY 327 (732)
Q Consensus 288 ~~~~~--~~~-------~~l~~~-~~~~~~~~s~dg~~l~~~s~~------------------------------~~~~~ 327 (732)
..+. .+. ..++.+ .+........-..++.+..|. +.-.+
T Consensus 230 -~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG 308 (399)
T KOG0296|consen 230 -QAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDG 308 (399)
T ss_pred -ccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccc
Confidence 0000 000 001111 111111111111122222220 11245
Q ss_pred eEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcE
Q 004766 328 KIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSV 407 (732)
Q Consensus 328 ~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~ 407 (732)
+|..+|++..+ .+...++. ..+..+.|.+ ...+++...+| .|+.||..+|+.+...+.+...|..+..+++.+
T Consensus 309 ~i~iyD~a~~~-~R~~c~he--~~V~~l~w~~-t~~l~t~c~~g--~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~- 381 (399)
T KOG0296|consen 309 TIAIYDLAAST-LRHICEHE--DGVTKLKWLN-TDYLLTACANG--KVRQWDARTGQLKFTYTGHQMGILDFALSPQKR- 381 (399)
T ss_pred eEEEEecccch-hheeccCC--CceEEEEEcC-cchheeeccCc--eEEeeeccccceEEEEecCchheeEEEEcCCCc-
Confidence 67777776655 45555554 3466677777 45555666664 788999888987667776666777788888776
Q ss_pred EEEEEec
Q 004766 408 VFISFTS 414 (732)
Q Consensus 408 l~~~~ss 414 (732)
++++.+.
T Consensus 382 ~vvT~s~ 388 (399)
T KOG0296|consen 382 LVVTVSD 388 (399)
T ss_pred EEEEecC
Confidence 3445444
No 188
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=98.54 E-value=7.1e-05 Score=72.18 Aligned_cols=256 Identities=13% Similarity=0.133 Sum_probs=148.3
Q ss_pred eeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEE
Q 004766 179 KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLV 258 (732)
Q Consensus 179 ~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~ 258 (732)
++..+-|++|++.|+-.+.+. ++.+|+.-|.+.... . +-...|++..++||.|++++
T Consensus 57 Ki~~~~ws~Dsr~ivSaSqDG-------------------klIvWDs~TtnK~ha--i--pl~s~WVMtCA~sPSg~~VA 113 (343)
T KOG0286|consen 57 KIYAMDWSTDSRRIVSASQDG-------------------KLIVWDSFTTNKVHA--I--PLPSSWVMTCAYSPSGNFVA 113 (343)
T ss_pred ceeeeEecCCcCeEEeeccCC-------------------eEEEEEcccccceeE--E--ecCceeEEEEEECCCCCeEE
Confidence 357899999999999876544 688899877654432 2 22346899999999999998
Q ss_pred EEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCC
Q 004766 259 MCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKE 336 (732)
Q Consensus 259 ~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 336 (732)
...-+ +..-++++.+.... ...+..+...+...-. ..|.+|+ +|+ +. ........+|+++
T Consensus 114 cGGLd-----N~Csiy~ls~~d~~--------g~~~v~r~l~gHtgylScC~f~dD~-~il--T~--SGD~TCalWDie~ 175 (343)
T KOG0286|consen 114 CGGLD-----NKCSIYPLSTRDAE--------GNVRVSRELAGHTGYLSCCRFLDDN-HIL--TG--SGDMTCALWDIET 175 (343)
T ss_pred ecCcC-----ceeEEEeccccccc--------ccceeeeeecCccceeEEEEEcCCC-ceE--ec--CCCceEEEEEccc
Confidence 65432 33444565542100 0111222222221111 1244443 443 22 2245788999999
Q ss_pred CCCceEeccCCCCCceeEEEEec-CCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecC
Q 004766 337 PNDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSF 415 (732)
Q Consensus 337 ~~~~~~l~~~~~~~~l~~~~~~~-~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~ 415 (732)
+...+.+..|. ..+-++.+++ +...+++..-|. ..++||...|...+.+..+...|..+.+-|+|.. |...|.
T Consensus 176 g~~~~~f~GH~--gDV~slsl~p~~~ntFvSg~cD~--~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~a--fatGSD 249 (343)
T KOG0286|consen 176 GQQTQVFHGHT--GDVMSLSLSPSDGNTFVSGGCDK--SAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDA--FATGSD 249 (343)
T ss_pred ceEEEEecCCc--ccEEEEecCCCCCCeEEeccccc--ceeeeeccCcceeEeecccccccceEEEccCCCe--eeecCC
Confidence 87555555555 3455677777 567888877774 4567898878766677666777888888888863 333333
Q ss_pred CCCceEEEEECCCCCCceEEEEeecC-CCCCCCCc-eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCC
Q 004766 416 LIPGIVYQCNLKTETPEMKIFRETII-PGFDRSEF-HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGF 491 (732)
Q Consensus 416 ~~p~~~y~~d~~~~~~~~~~l~~~~~-~~~~~~~~-~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~ 491 (732)
. .+...||+.... ++.++..... -++..-.| ..-++.|...+. ..+.+|=.. .+..-.+|++|+.-
T Consensus 250 D--~tcRlyDlRaD~-~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d-~~c~vWDtl------k~e~vg~L~GHeNR 317 (343)
T KOG0286|consen 250 D--ATCRLYDLRADQ-ELAVYSHDSIICGITSVAFSKSGRLLFAGYDD-FTCNVWDTL------KGERVGVLAGHENR 317 (343)
T ss_pred C--ceeEEEeecCCc-EEeeeccCcccCCceeEEEcccccEEEeeecC-CceeEeecc------ccceEEEeeccCCe
Confidence 3 445566776543 2444332111 11222222 334444544333 455555332 35677888888863
No 189
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=98.53 E-value=1.9e-05 Score=83.98 Aligned_cols=227 Identities=13% Similarity=0.020 Sum_probs=137.6
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc--cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL--SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
.+..+.|+|+|++||.... ...+.|||++..+.+.... ...+.+.++|. +..+.-.
T Consensus 219 ~vtSv~ws~~G~~LavG~~-----~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssG--------------- 276 (484)
T KOG0305|consen 219 LVTSVKWSPDGSHLAVGTS-----DGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSG--------------- 276 (484)
T ss_pred ceEEEEECCCCCEEEEeec-----CCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEe---------------
Confidence 4678999999999998753 2479999998766443222 23356889997 3333332
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
.+...|..+++-..+..-. ... .+..-+.++.|++||++++-..+ .+.++++|....
T Consensus 277 ----sr~~~I~~~dvR~~~~~~~-~~~--~H~qeVCgLkws~d~~~lASGgn-----DN~~~Iwd~~~~----------- 333 (484)
T KOG0305|consen 277 ----SRDGKILNHDVRISQHVVS-TLQ--GHRQEVCGLKWSPDGNQLASGGN-----DNVVFIWDGLSP----------- 333 (484)
T ss_pred ----cCCCcEEEEEEecchhhhh-hhh--cccceeeeeEECCCCCeeccCCC-----ccceEeccCCCc-----------
Confidence 2334566666655432211 111 12334678999999999874433 356888887441
Q ss_pred CCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEEEEEe
Q 004766 291 GLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYL 368 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~~~~~ 368 (732)
.+...+.....+. ...|+|...-|+.... +.....|..+|..++.....+-. ...|..+.|++.. .++.+.
T Consensus 334 --~p~~~~~~H~aAVKA~awcP~q~~lLAsGG-Gs~D~~i~fwn~~~g~~i~~vdt---gsQVcsL~Wsk~~kEi~sth- 406 (484)
T KOG0305|consen 334 --EPKFTFTEHTAAVKALAWCPWQSGLLATGG-GSADRCIKFWNTNTGARIDSVDT---GSQVCSLIWSKKYKELLSTH- 406 (484)
T ss_pred --cccEEEeccceeeeEeeeCCCccCceEEcC-CCcccEEEEEEcCCCcEeccccc---CCceeeEEEcCCCCEEEEec-
Confidence 1233333322222 2358886555554333 33456788888887763333322 3578899999843 354433
Q ss_pred cCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEE
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFIS 411 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~ 411 (732)
-....+|.+|+..+-+.+..+..+..-|..++.+|||..++..
T Consensus 407 G~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~ 449 (484)
T KOG0305|consen 407 GYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTG 449 (484)
T ss_pred CCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEe
Confidence 3334578888876555545666566667788999999876543
No 190
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.53 E-value=0.00021 Score=75.71 Aligned_cols=264 Identities=14% Similarity=0.137 Sum_probs=132.0
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEEC--CCCceec--ccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRI--EDQIVEA--DAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl--~~g~~~~--~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
+.+.+||++++| |+.+..+.+...|..+.+ ++|.... ... .+.....++.+||++.|+.+...
T Consensus 40 s~l~~~~~~~~L-Y~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~----------- 107 (345)
T PF10282_consen 40 SWLAVSPDGRRL-YVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYG----------- 107 (345)
T ss_dssp CCEEE-TTSSEE-EEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETT-----------
T ss_pred ceEEEEeCCCEE-EEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEcc-----------
Confidence 367899999866 555554211234444444 4455321 111 22223568889999988877532
Q ss_pred CcccCCcccEEEEEECCCCCCCCeE--EEe----cC----CCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCC
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDIL--CWK----DP----EHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~--v~~----~~----~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
...|..+++.....-... ++. .+ ........+.++|||++++... .+. ..|++++++..
T Consensus 108 -------~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~d-lG~---D~v~~~~~~~~ 176 (345)
T PF10282_consen 108 -------GGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPD-LGA---DRVYVYDIDDD 176 (345)
T ss_dssp -------TTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEE-TTT---TEEEEEEE-TT
T ss_pred -------CCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEe-cCC---CEEEEEEEeCC
Confidence 234666666543211111 111 11 1112345788999999997654 332 45777776552
Q ss_pred CCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCC--CCC--CceE--eccCCC--CCc
Q 004766 280 PEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK--EPN--DWFE--VIPEAE--RDV 351 (732)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~--~~~--~~~~--l~~~~~--~~~ 351 (732)
...+.. .....+..+.......|+|||+.+|++.... . .|..+++. ++. .... ..+... ...
T Consensus 177 ~~~l~~-------~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s-~--~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 246 (345)
T PF10282_consen 177 TGKLTP-------VDSIKVPPGSGPRHLAFSPDGKYAYVVNELS-N--TVSVFDYDPSDGSLTEIQTISTLPEGFTGENA 246 (345)
T ss_dssp S-TEEE-------EEEEECSTTSSEEEEEE-TTSSEEEEEETTT-T--EEEEEEEETTTTEEEEEEEEESCETTSCSSSS
T ss_pred CceEEE-------eeccccccCCCCcEEEEcCCcCEEEEecCCC-C--cEEEEeecccCCceeEEEEeeeccccccccCC
Confidence 100100 0001122233344557999999988766543 2 44444444 332 1111 122211 124
Q ss_pred eeEEEEecCCE-EEEEEecCCeeEEEEEeC--CCCceeeeccc-c-cc-eeeEeecccCCcEEEEEEecCCCCceEEEEE
Q 004766 352 LESATAVNLNQ-MIVSYLSDVKYVLQIRDL--KNGSLLHQLPI-E-IG-SVNAISARREDSVVFISFTSFLIPGIVYQCN 425 (732)
Q Consensus 352 l~~~~~~~~~~-l~~~~~~~g~~~l~~~d~--~~g~~~~~l~~-~-~g-~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d 425 (732)
...+.++++++ ||++.+.. ..|.++++ ++|+. +.+.. + .| ....+.++++|+.|+++-.. ..--.+|.+|
T Consensus 247 ~~~i~ispdg~~lyvsnr~~--~sI~vf~~d~~~g~l-~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~-s~~v~vf~~d 322 (345)
T PF10282_consen 247 PAEIAISPDGRFLYVSNRGS--NSISVFDLDPATGTL-TLVQTVPTGGKFPRHFAFSPDGRYLYVANQD-SNTVSVFDID 322 (345)
T ss_dssp EEEEEE-TTSSEEEEEECTT--TEEEEEEECTTTTTE-EEEEEEEESSSSEEEEEE-TTSSEEEEEETT-TTEEEEEEEE
T ss_pred ceeEEEecCCCEEEEEeccC--CEEEEEEEecCCCce-EEEEEEeCCCCCccEEEEeCCCCEEEEEecC-CCeEEEEEEe
Confidence 56788887654 55554443 56777776 44553 33321 2 12 24567788999987765433 3335667778
Q ss_pred CCCCCCceEEEE
Q 004766 426 LKTETPEMKIFR 437 (732)
Q Consensus 426 ~~~~~~~~~~l~ 437 (732)
..+|. ++...
T Consensus 323 ~~tG~--l~~~~ 332 (345)
T PF10282_consen 323 PDTGK--LTPVG 332 (345)
T ss_dssp TTTTE--EEEEE
T ss_pred CCCCc--EEEec
Confidence 78884 54443
No 191
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=98.53 E-value=3.4e-06 Score=85.77 Aligned_cols=201 Identities=13% Similarity=0.101 Sum_probs=121.8
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
.++..+.+|||+++||+.- . ...|+++-..|++.+.. .+++ ...++.||.||+.|+.+..
T Consensus 304 ~~~e~FeVShd~~fia~~G----~-~G~I~lLhakT~eli~s~KieG-~v~~~~fsSdsk~l~~~~~------------- 364 (514)
T KOG2055|consen 304 KSMERFEVSHDSNFIAIAG----N-NGHIHLLHAKTKELITSFKIEG-VVSDFTFSSDSKELLASGG------------- 364 (514)
T ss_pred chhheeEecCCCCeEEEcc----c-CceEEeehhhhhhhhheeeecc-EEeeEEEecCCcEEEEEcC-------------
Confidence 3677899999999999872 2 25899999999986543 3333 3689999999998887632
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCC-CeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEH-PKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
..+||.|++++... +....++ ...-.+++.|++|.|++..+..+- +-++|..+--. .
T Consensus 365 ------~GeV~v~nl~~~~~----~~rf~D~G~v~gts~~~S~ng~ylA~GS~~Gi-----VNIYd~~s~~~-------s 422 (514)
T KOG2055|consen 365 ------TGEVYVWNLRQNSC----LHRFVDDGSVHGTSLCISLNGSYLATGSDSGI-----VNIYDGNSCFA-------S 422 (514)
T ss_pred ------CceEEEEecCCcce----EEEEeecCccceeeeeecCCCceEEeccCcce-----EEEeccchhhc-------c
Confidence 23799999997643 3322222 223458899999999987664433 33445332100 0
Q ss_pred CCCCCcE---EeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCC-CCceEeccCCCCCceeEEEEecCCEEEE
Q 004766 290 DGLLPFV---KLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP-NDWFEVIPEAERDVLESATAVNLNQMIV 365 (732)
Q Consensus 290 ~~~~~~~---~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~-~~~~~l~~~~~~~~l~~~~~~~~~~l~~ 365 (732)
..++|.. .|+.. .....|+||++.|++.++......+|+-++--+- .+|.+ +...-..+..+.+++++..+.
T Consensus 423 ~~PkPik~~dNLtt~--Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~--~n~~vg~vtc~aFSP~sG~lA 498 (514)
T KOG2055|consen 423 TNPKPIKTVDNLTTA--ITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPT--SNTKVGHVTCMAFSPNSGYLA 498 (514)
T ss_pred CCCCchhhhhhhhee--eeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCC--CCCcccceEEEEecCCCceEE
Confidence 1123332 22221 1223589999999988876544556655542110 12211 111124467788888666666
Q ss_pred EEecCCeeEEEE
Q 004766 366 SYLSDVKYVLQI 377 (732)
Q Consensus 366 ~~~~~g~~~l~~ 377 (732)
...+.|+..|+.
T Consensus 499 vGNe~grv~l~k 510 (514)
T KOG2055|consen 499 VGNEAGRVHLFK 510 (514)
T ss_pred eecCCCceeeEe
Confidence 777776555543
No 192
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.53 E-value=1.3e-06 Score=85.91 Aligned_cols=207 Identities=15% Similarity=0.091 Sum_probs=122.6
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHh---cCcEEEEEcccCCCCCchh
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH---LGAVFCIANIRGGGEYGEE 528 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~---~G~~v~~~~~rG~g~~g~~ 528 (732)
+.+.+.+.-. .+....++.|.++.+..++|+++..||-......+- ...+-.++++ ...+++.+++----...+.
T Consensus 70 ~~~~~~~~l~-~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i-~~~~dsli~~g~i~pai~vgid~~d~~~R~~~ 147 (299)
T COG2382 70 EEILYSSELL-SERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRI-PRILDSLIAAGEIPPAILVGIDYIDVKKRREE 147 (299)
T ss_pred hhhhhhhhhc-cceeEEEEeCCCCCccccccEEEEeccHHHHhcCCh-HHHHHHHHHcCCCCCceEEecCCCCHHHHHHH
Confidence 3444444333 366677888888888899999999998644332211 1122344441 2467777776332221122
Q ss_pred HHhcccccCCccHHHHHHH--HHHHHHHc--CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccC
Q 004766 529 WHKGGALAKKQNCFDDFIS--ASEYLISA--GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKF 604 (732)
Q Consensus 529 ~~~~~~~~~~~~~~~D~~~--~~~~l~~~--~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~ 604 (732)
++ ....+.++++ .+=++.+. -.-++++-+++|-|+||+.+++++.++|++|..+++.+|.++..--...
T Consensus 148 ~~-------~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~ 220 (299)
T COG2382 148 LH-------CNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQ 220 (299)
T ss_pred hc-------ccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccc
Confidence 22 1112222222 12222222 1236778999999999999999999999999999999998765211110
Q ss_pred CCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCC
Q 004766 605 TIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLE 684 (732)
Q Consensus 605 ~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~ 684 (732)
.++. . +...+-++.+.. ...-+|...+..+...++ .+.+++.|+..
T Consensus 221 -------~~~~------~---~~~l~~~~a~~~----------~~~~~l~~g~~~~~~~~p--Nr~L~~~L~~~------ 266 (299)
T COG2382 221 -------PQGE------V---AESLKILHAIGT----------DERIVLTTGGEEGDFLRP--NRALAAQLEKK------ 266 (299)
T ss_pred -------cccc------h---hhhhhhhhccCc----------cceEEeecCCccccccch--hHHHHHHHHhc------
Confidence 1111 1 111122233333 223566666666666665 45788889887
Q ss_pred CCCCCCCEEEEEeCCCCCCCCC
Q 004766 685 NSPQTNPIIGRIERKAGHGVGL 706 (732)
Q Consensus 685 ~~~~~~~~~~~~~~~~gH~~~~ 706 (732)
+.++.+..|+| ||-...
T Consensus 267 ----g~~~~yre~~G-gHdw~~ 283 (299)
T COG2382 267 ----GIPYYYREYPG-GHDWAW 283 (299)
T ss_pred ----CCcceeeecCC-CCchhH
Confidence 99999999998 996543
No 193
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=98.53 E-value=8.6e-06 Score=83.97 Aligned_cols=238 Identities=14% Similarity=0.064 Sum_probs=140.0
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec------------ccccce-eeeeEEEEeCCcEEEEEEe
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA------------DALSWF-KFSSIAWTHDSKGFFYSRY 197 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~------------~~~~~~-~~~~~~WspDg~~l~y~~~ 197 (732)
...+...+|||.|..|+.++ |+ .+..|+|-++-+... .+.+.+ ....-+|.|+.+..|.++.
T Consensus 214 ~h~i~sl~ys~Tg~~iLvvs---g~--aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s 288 (641)
T KOG0772|consen 214 THQINSLQYSVTGDQILVVS---GS--AQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCS 288 (641)
T ss_pred ccccceeeecCCCCeEEEEe---cC--cceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEec
Confidence 44678999999999998774 44 477778876543221 122211 2356789999999888864
Q ss_pred cCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCe--eEEEeEEecCCcEEEEEEecCCcceEEEEEEe
Q 004766 198 PAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPK--YIFSGHVTEDGQYLVMCIEENCDPVNKVYYCD 275 (732)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~--~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d 275 (732)
. ...+..|++.....+..++-..+.... .....+|+|||++|+....++. |-+|+
T Consensus 289 ~------------------DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGS-----IQ~W~ 345 (641)
T KOG0772|consen 289 Y------------------DGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGS-----IQIWD 345 (641)
T ss_pred C------------------CCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCc-----eeeee
Confidence 3 335777787655544333322222211 2347789999999876665443 55556
Q ss_pred CCCCCCCcccccccCCCCCcEEeeecc----cceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCC----ceEeccCC
Q 004766 276 LSALPEGLEGFKKRDGLLPFVKLIDGF----DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND----WFEVIPEA 347 (732)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~----~~~l~~~~ 347 (732)
..+.. ..+...+.... +.....||.||+.|+-.+. ...|-++||...+. +.-|...
T Consensus 346 ~~~~~-----------v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~----D~tLKvWDLrq~kkpL~~~tgL~t~- 409 (641)
T KOG0772|consen 346 KGSRT-----------VRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGF----DDTLKVWDLRQFKKPLNVRTGLPTP- 409 (641)
T ss_pred cCCcc-----------cccceEeeeccCCCCceeEEEeccccchhhhccC----CCceeeeeccccccchhhhcCCCcc-
Confidence 53311 11111222111 1122358999998774333 33578888877651 2222111
Q ss_pred CCCceeEEEEecCCEEEEEEecC----CeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEec
Q 004766 348 ERDVLESATAVNLNQMIVSYLSD----VKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTS 414 (732)
Q Consensus 348 ~~~~l~~~~~~~~~~l~~~~~~~----g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss 414 (732)
..-.+..+++++.|+++...- +...|+.+|..+=+.+.+|..+..+|....|.|.=+.+++....
T Consensus 410 --~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgd 478 (641)
T KOG0772|consen 410 --FPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGD 478 (641)
T ss_pred --CCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCC
Confidence 223467788888888876542 23578888876555556776665566666777776666654433
No 194
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.53 E-value=4.9e-06 Score=92.86 Aligned_cols=172 Identities=12% Similarity=0.092 Sum_probs=101.6
Q ss_pred EEEeEEECCCCcEEEEEEec---cCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSY---SGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~---~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
.+..+++||||+++||+... .++...+||+.+. +|...+.+... ..+.++|||||+.|+|++..... .
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~-~~t~PsWspDG~~lw~v~dg~~~-------~ 421 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGH-SLTRPSWSLDADAVWVVVDGNTV-------V 421 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCC-CCCCceECCCCCceEEEecCcce-------E
Confidence 46789999999999999842 1223569999997 44333322222 24789999999999998643210 0
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEE---EeCCCCCCCcccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYY---CDLSALPEGLEGF 286 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~---~d~~~~~~~~~~~ 286 (732)
.........++|...+..+.... .. ..-+.++.|||||++|++... .+||+ ...++|...
T Consensus 422 ~v~~~~~~gql~~~~vd~ge~~~----~~---~g~Issl~wSpDG~RiA~i~~------g~v~Va~Vvr~~~G~~~---- 484 (591)
T PRK13616 422 RVIRDPATGQLARTPVDASAVAS----RV---PGPISELQLSRDGVRAAMIIG------GKVYLAVVEQTEDGQYA---- 484 (591)
T ss_pred EEeccCCCceEEEEeccCchhhh----cc---CCCcCeEEECCCCCEEEEEEC------CEEEEEEEEeCCCCcee----
Confidence 00001123467777776543321 11 123568999999999999872 25777 443443211
Q ss_pred cccCCCCCcEEeeecccc--eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC
Q 004766 287 KKRDGLLPFVKLIDGFDA--QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 338 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 338 (732)
....+.+...... .-..|..++. |++.+.. ....++.+++++..
T Consensus 485 -----l~~~~~l~~~l~~~~~~l~W~~~~~-L~V~~~~--~~~~v~~v~vDG~~ 530 (591)
T PRK13616 485 -----LTNPREVGPGLGDTAVSLDWRTGDS-LVVGRSD--PEHPVWYVNLDGSN 530 (591)
T ss_pred -----ecccEEeecccCCccccceEecCCE-EEEEecC--CCCceEEEecCCcc
Confidence 1112334433322 1124887665 6666543 34568999998765
No 195
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.52 E-value=5.4e-06 Score=79.50 Aligned_cols=102 Identities=17% Similarity=0.166 Sum_probs=68.1
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
+..++|||+|+++|.+.. .-...|.++|+++...... +......+.|||+|+.|+......
T Consensus 62 I~~~~WsP~g~~favi~g---~~~~~v~lyd~~~~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n-------------- 122 (194)
T PF08662_consen 62 IHDVAWSPNGNEFAVIYG---SMPAKVTLYDVKGKKIFSF--GTQPRNTISWSPDGRFLVLAGFGN-------------- 122 (194)
T ss_pred eEEEEECcCCCEEEEEEc---cCCcccEEEcCcccEeEee--cCCCceEEEECCCCCEEEEEEccC--------------
Confidence 779999999999998853 2223789999973333222 122236799999999999876432
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEe
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIE 262 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 262 (732)
....|.+|++.+. ..+... +.. ....+.|||||++++....
T Consensus 123 --~~G~l~~wd~~~~----~~i~~~-~~~-~~t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 123 --LNGDLEFWDVRKK----KKISTF-EHS-DATDVEWSPDGRYLATATT 163 (194)
T ss_pred --CCcEEEEEECCCC----EEeecc-ccC-cEEEEEEcCCCCEEEEEEe
Confidence 2245888887732 133322 222 3468899999999987653
No 196
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=98.52 E-value=3.4e-06 Score=86.89 Aligned_cols=192 Identities=16% Similarity=0.120 Sum_probs=105.6
Q ss_pred CCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc-eec------ccccceeeeeEEEEeCCcEEEEEEecCC
Q 004766 128 DDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI-VEA------DALSWFKFSSIAWTHDSKGFFYSRYPAP 200 (732)
Q Consensus 128 ~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~-~~~------~~~~~~~~~~~~WspDg~~l~y~~~~~~ 200 (732)
+++...+..-.|.|+.+-...+.+.+| ++++||+..-+ .+. .....+.....+|+|||+.|+-...++
T Consensus 265 KGHia~lt~g~whP~~k~~FlT~s~Dg----tlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DG- 339 (641)
T KOG0772|consen 265 KGHIAELTCGCWHPDNKEEFLTCSYDG----TLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDG- 339 (641)
T ss_pred CCceeeeeccccccCcccceEEecCCC----cEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCC-
Confidence 344566788899999998888876554 78999987543 221 112223346789999999988766544
Q ss_pred CCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCC-eeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCC
Q 004766 201 KEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHP-KYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
.|-.|+.+.....-...+.....+ .-+.++.||+||++|+-.+.+ ..+-+|||...
T Consensus 340 ------------------SIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D-----~tLKvWDLrq~ 396 (641)
T KOG0772|consen 340 ------------------SIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFD-----DTLKVWDLRQF 396 (641)
T ss_pred ------------------ceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCC-----Cceeeeecccc
Confidence 244555543322222222211111 235689999999999755433 33777787753
Q ss_pred CCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCC---CCCCceEEEEeCCCCCCceEeccCCCCCceeEEE
Q 004766 280 PEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNK---DAPKYKIIRVDLKEPNDWFEVIPEAERDVLESAT 356 (732)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~---~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~ 356 (732)
...+ ..+..|...+...-..||||.+ |++.... +.....|+.+|..+-.....+. -. ...+..+.
T Consensus 397 kkpL---------~~~tgL~t~~~~tdc~FSPd~k-li~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~-i~-~aSvv~~~ 464 (641)
T KOG0772|consen 397 KKPL---------NVRTGLPTPFPGTDCCFSPDDK-LILTGTSAPNGMTAGTLFFFDRMTLDTVYKID-IS-TASVVRCL 464 (641)
T ss_pred ccch---------hhhcCCCccCCCCccccCCCce-EEEecccccCCCCCceEEEEeccceeeEEEec-CC-CceEEEEe
Confidence 2100 0122333334333456999765 4433221 1123467777765543222221 11 24444556
Q ss_pred Eec
Q 004766 357 AVN 359 (732)
Q Consensus 357 ~~~ 359 (732)
|.+
T Consensus 465 Whp 467 (641)
T KOG0772|consen 465 WHP 467 (641)
T ss_pred ecc
Confidence 655
No 197
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.51 E-value=3.9e-06 Score=81.70 Aligned_cols=125 Identities=20% Similarity=0.232 Sum_probs=76.8
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCC--------------Cchh
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGE--------------YGEE 528 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~--------------~g~~ 528 (732)
.++|+..-.|-.. +++++|+||+.||-.+++ ..|+.-... |+++||+|+++..|-... +-+.
T Consensus 101 ~r~~~~~n~~~~t-k~~k~PvvvFSHGLggsR--t~YSa~c~~-LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq 176 (399)
T KOG3847|consen 101 KRVPCIENAPLST-KNDKYPVVVFSHGLGGSR--TLYSAYCTS-LASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQ 176 (399)
T ss_pred ccccccccCCCCC-CCCCccEEEEecccccch--hhHHHHhhh-HhhCceEEEEeecccCcceeEEEecccccCCccccc
Confidence 4555543333322 368999999999987764 245544444 455999999999996532 2233
Q ss_pred HHhcccc--cCC----cc-----HHHHHHHHHHHHHH---------------------cCCCCCCcEEEEecChhHHHHH
Q 004766 529 WHKGGAL--AKK----QN-----CFDDFISASEYLIS---------------------AGYTQSRKLCIEGGSNGGLLVG 576 (732)
Q Consensus 529 ~~~~~~~--~~~----~~-----~~~D~~~~~~~l~~---------------------~~~~d~~~i~i~G~S~GG~l~~ 576 (732)
|..--.. .-+ +| ..+.+..|++-|.+ ++-+|.++++++|||.||..++
T Consensus 177 ~~~ir~v~~~ekef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i 256 (399)
T KOG3847|consen 177 WIKIRLVEANEKEFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSI 256 (399)
T ss_pred ceEeeeeccCceeEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhh
Confidence 3321110 111 01 12344444443332 2346788999999999999998
Q ss_pred HHHhhCCCeeeEEEEc
Q 004766 577 ACINQRPDLFGCALAH 592 (732)
Q Consensus 577 ~~~~~~p~~f~a~v~~ 592 (732)
+....+ ..|+|+|+.
T Consensus 257 ~~ss~~-t~FrcaI~l 271 (399)
T KOG3847|consen 257 ASSSSH-TDFRCAIAL 271 (399)
T ss_pred hhhccc-cceeeeeee
Confidence 888763 579999864
No 198
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.51 E-value=1.3e-05 Score=79.23 Aligned_cols=247 Identities=15% Similarity=0.098 Sum_probs=151.8
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc-eec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI-VEA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~-~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
+.-++..++++..|++||-.+ ....+.+||.++-. .+. ........+.+.+-|-|..|+-.+
T Consensus 149 Ht~sv~di~~~a~Gk~l~tcS-----sDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~s----------- 212 (406)
T KOG0295|consen 149 HTDSVFDISFDASGKYLATCS-----SDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCS----------- 212 (406)
T ss_pred cccceeEEEEecCccEEEecC-----CccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecc-----------
Confidence 345688899999999888553 22458889987632 111 111111248899999998887654
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc-cc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE-GF 286 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~ 286 (732)
+...|..|++.++- +++.-+.++.|+..+..+-||..++-.+++ +.|.++.++++.+..+ +.
T Consensus 213 --------rD~tik~We~~tg~----cv~t~~~h~ewvr~v~v~~DGti~As~s~d-----qtl~vW~~~t~~~k~~lR~ 275 (406)
T KOG0295|consen 213 --------RDNTIKAWECDTGY----CVKTFPGHSEWVRMVRVNQDGTIIASCSND-----QTLRVWVVATKQCKAELRE 275 (406)
T ss_pred --------cccceeEEecccce----eEEeccCchHhEEEEEecCCeeEEEecCCC-----ceEEEEEeccchhhhhhhc
Confidence 44468889988764 455555556688888999999887655432 3455666666533210 00
Q ss_pred cccCCCCCcEEeeecccceEEEE---Ee--cCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC
Q 004766 287 KKRDGLLPFVKLIDGFDAQYEVI---AN--DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN 361 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~~~~~~~---s~--dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~ 361 (732)
+ ..+.+.+.-.....++.+ .+ +|..+.+...++ ..+-.+|+.++...-+|..+. ..+.++.+++++
T Consensus 276 h----Eh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrD---ktIk~wdv~tg~cL~tL~ghd--nwVr~~af~p~G 346 (406)
T KOG0295|consen 276 H----EHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRD---KTIKIWDVSTGMCLFTLVGHD--NWVRGVAFSPGG 346 (406)
T ss_pred c----ccceEEEEecccccCcchhhccCCCCCccEEEeeccc---ceEEEEeccCCeEEEEEeccc--ceeeeeEEcCCC
Confidence 0 111111111111111111 11 233444443333 356778888887677787776 668899999878
Q ss_pred EEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEE
Q 004766 362 QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVY 422 (732)
Q Consensus 362 ~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y 422 (732)
+.+++..+|+ .|.+||+.+++....+..+...+..+++..+.. ++...+..++..++
T Consensus 347 kyi~ScaDDk--tlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p--~VvTGsVdqt~Kvw 403 (406)
T KOG0295|consen 347 KYILSCADDK--TLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVW 403 (406)
T ss_pred eEEEEEecCC--cEEEEEeccceeeeccCCCcceeEEEecCCCCc--eEEeccccceeeee
Confidence 8888888884 788999998887777776677777777654444 44445555554443
No 199
>PTZ00421 coronin; Provisional
Probab=98.51 E-value=0.00015 Score=79.76 Aligned_cols=243 Identities=11% Similarity=0.040 Sum_probs=129.8
Q ss_pred ECCCCcEEEEEEeccCCceEEEEEEECCCCceec----ccccceeeeeEEEEe-CCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 139 VSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA----DALSWFKFSSIAWTH-DSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 139 ~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~----~~~~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
++.+.+++|+..+..|. ...+..-+.|+... .......+..++|+| |++.|+..+.+
T Consensus 36 ~~~n~~~~a~~w~~~gg---~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~D--------------- 97 (493)
T PTZ00421 36 IACNDRFIAVPWQQLGS---TAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASED--------------- 97 (493)
T ss_pred EeECCceEEEEEecCCc---eEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCC---------------
Confidence 56677788887765553 12222223444221 011112347899999 88877766433
Q ss_pred CCcccEEEEEECCCCCC-----CCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 214 SNLYHEFYYHFLGTKQS-----EDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~-----~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
..|.+|++.++.. ..+..+.. +...+..+.|+|++..++++++. ...|.++|+.++.
T Consensus 98 ----gtIkIWdi~~~~~~~~~~~~l~~L~g--H~~~V~~l~f~P~~~~iLaSgs~----DgtVrIWDl~tg~-------- 159 (493)
T PTZ00421 98 ----GTIMGWGIPEEGLTQNISDPIVHLQG--HTKKVGIVSFHPSAMNVLASAGA----DMVVNVWDVERGK-------- 159 (493)
T ss_pred ----CEEEEEecCCCccccccCcceEEecC--CCCcEEEEEeCcCCCCEEEEEeC----CCEEEEEECCCCe--------
Confidence 3688888865421 11222222 23345688999997544444432 2347888987642
Q ss_pred cCCCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEE
Q 004766 289 RDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSY 367 (732)
Q Consensus 289 ~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~ 367 (732)
....+....+... ..|+|+|..|+..+. +..|..+|+.++.....+..+. ......+.|.+++..+++.
T Consensus 160 -----~~~~l~~h~~~V~sla~spdG~lLatgs~----Dg~IrIwD~rsg~~v~tl~~H~-~~~~~~~~w~~~~~~ivt~ 229 (493)
T PTZ00421 160 -----AVEVIKCHSDQITSLEWNLDGSLLCTTSK----DKKLNIIDPRDGTIVSSVEAHA-SAKSQRCLWAKRKDLIITL 229 (493)
T ss_pred -----EEEEEcCCCCceEEEEEECCCCEEEEecC----CCEEEEEECCCCcEEEEEecCC-CCcceEEEEcCCCCeEEEE
Confidence 1222222222112 248999887664332 3468889998776444444443 2233345566543444433
Q ss_pred e-c-CCeeEEEEEeCCCCc-eeeecccc-cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 368 L-S-DVKYVLQIRDLKNGS-LLHQLPIE-IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 368 ~-~-~g~~~l~~~d~~~g~-~~~~l~~~-~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
. . .....|.+||+.+.. ....+... ...+....++++++.+++...+ -..+..||+.+++
T Consensus 230 G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkg---Dg~Iriwdl~~~~ 293 (493)
T PTZ00421 230 GCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKG---EGNIRCFELMNER 293 (493)
T ss_pred ecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeC---CCeEEEEEeeCCc
Confidence 2 1 223579999986543 22222222 1223334567788866654322 2468888887764
No 200
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.49 E-value=7.2e-05 Score=77.51 Aligned_cols=205 Identities=12% Similarity=0.096 Sum_probs=110.4
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEE--------EeCCcEEEEEEecCCCCCCCC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAW--------THDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~W--------spDg~~l~y~~~~~~~~~~~~ 206 (732)
.+.+|||||+|.+. +... ...+-|+|+++++.+.+. ..++. .-+.+ +.||+.+.++....
T Consensus 109 ~~~ls~dgk~l~V~-n~~p--~~~V~VvD~~~~kvv~ei~vp~~~-~vy~t~e~~~~~~~~Dg~~~~v~~d~~------- 177 (352)
T TIGR02658 109 MTSLTPDNKTLLFY-QFSP--SPAVGVVDLEGKAFVRMMDVPDCY-HIFPTANDTFFMHCRDGSLAKVGYGTK------- 177 (352)
T ss_pred eEEECCCCCEEEEe-cCCC--CCEEEEEECCCCcEEEEEeCCCCc-EEEEecCCccEEEeecCceEEEEecCC-------
Confidence 68899999987644 3332 257899999999876422 22221 22333 34444333332111
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec-CCcEEEEEEecCCcceEEEEEEeCCCCCCCccc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG 285 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 285 (732)
+. +. .....+|...+.+ .+..+.+++ ||++++.+. . ..++++|+++.....
T Consensus 178 --------g~---~~--------~~~~~vf~~~~~~-v~~rP~~~~~dg~~~~vs~-e-----G~V~~id~~~~~~~~-- 229 (352)
T TIGR02658 178 --------GN---PK--------IKPTEVFHPEDEY-LINHPAYSNKSGRLVWPTY-T-----GKIFQIDLSSGDAKF-- 229 (352)
T ss_pred --------Cc---eE--------EeeeeeecCCccc-cccCCceEcCCCcEEEEec-C-----CeEEEEecCCCccee--
Confidence 00 11 0111222211111 112334566 887775543 2 459999976532110
Q ss_pred ccccCCCCCcEEeee-----cccce---EEEEEecCCeEEEEeCCC------CCCceEEEEeCCCCCCceEeccCCCCCc
Q 004766 286 FKKRDGLLPFVKLID-----GFDAQ---YEVIANDDTVFTFLTNKD------APKYKIIRVDLKEPNDWFEVIPEAERDV 351 (732)
Q Consensus 286 ~~~~~~~~~~~~l~~-----~~~~~---~~~~s~dg~~l~~~s~~~------~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 351 (732)
..++..+.. ++... ...++++|+++|++.+.. .+...|+.+|+++.+....+ +-. ..
T Consensus 230 ------~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i-~vG--~~ 300 (352)
T TIGR02658 230 ------LPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKI-ELG--HE 300 (352)
T ss_pred ------cceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEE-eCC--Cc
Confidence 111222111 11111 134788999999866421 22357999999888733333 222 34
Q ss_pred eeEEEEecCCE-EEEEEecCCeeEEEEEeCCCCceeeec
Q 004766 352 LESATAVNLNQ-MIVSYLSDVKYVLQIRDLKNGSLLHQL 389 (732)
Q Consensus 352 l~~~~~~~~~~-l~~~~~~~g~~~l~~~d~~~g~~~~~l 389 (732)
..++.+++|++ +++..+.. ...|.++|.++++.++.+
T Consensus 301 ~~~iavS~Dgkp~lyvtn~~-s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 301 IDSINVSQDAKPLLYALSTG-DKTLYIFDAETGKELSSV 338 (352)
T ss_pred eeeEEECCCCCeEEEEeCCC-CCcEEEEECcCCeEEeee
Confidence 67788998755 55544432 356999999988877777
No 201
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=98.49 E-value=2.2e-05 Score=80.29 Aligned_cols=249 Identities=10% Similarity=0.075 Sum_probs=147.2
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCC-------
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGK------- 204 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~------- 204 (732)
..+..+.|+-||..||+.. +...+++|+..++...........+.++.|..+|.+|+-...+..-...
T Consensus 236 kdVT~L~Wn~~G~~LatG~-----~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~ 310 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGS-----EDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTV 310 (524)
T ss_pred CCcceEEecCCCCeEEEee-----cCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceE
Confidence 3477899999999999764 4458999998766544433333334789999999888876544321000
Q ss_pred --------------CCC-CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceE
Q 004766 205 --------------DMD-AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVN 269 (732)
Q Consensus 205 --------------~~~-~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 269 (732)
+|- ..+..-+.....|++.+++...... -+.. +.+-+..+.|.|.|+.|+-.+.+. +-
T Consensus 311 ~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~--t~~G--H~g~V~alk~n~tg~LLaS~SdD~---Tl 383 (524)
T KOG0273|consen 311 KQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVK--TFIG--HHGEVNALKWNPTGSLLASCSDDG---TL 383 (524)
T ss_pred EEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcce--eeec--ccCceEEEEECCCCceEEEecCCC---ee
Confidence 010 0000001223346677776543322 1222 223355788999999887666443 34
Q ss_pred EEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEE-EEEecCCe-------EEEEeCCCCCCceEEEEeCCCCCCce
Q 004766 270 KVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYE-VIANDDTV-------FTFLTNKDAPKYKIIRVDLKEPNDWF 341 (732)
Q Consensus 270 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~-------l~~~s~~~~~~~~l~~~d~~~~~~~~ 341 (732)
+||-+--.+ + ...+-......|. .|+|+|.- +.+++. ..+..|-.+|+..+.+..
T Consensus 384 kiWs~~~~~--~-------------~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sa--s~dstV~lwdv~~gv~i~ 446 (524)
T KOG0273|consen 384 KIWSMGQSN--S-------------VHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASA--SFDSTVKLWDVESGVPIH 446 (524)
T ss_pred EeeecCCCc--c-------------hhhhhhhccceeeEeecCCCCccCCCcCCceEEEe--ecCCeEEEEEccCCceeE
Confidence 455332111 1 1112111111222 36665431 111111 123457778888887666
Q ss_pred EeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEec
Q 004766 342 EVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTS 414 (732)
Q Consensus 342 ~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss 414 (732)
.+..+. ..+.++.++++++.+++...++ .|.+|+..+|+..+... ..+.|..+.++.+|+.+...++.
T Consensus 447 ~f~kH~--~pVysvafS~~g~ylAsGs~dg--~V~iws~~~~~l~~s~~-~~~~Ifel~Wn~~G~kl~~~~sd 514 (524)
T KOG0273|consen 447 TLMKHQ--EPVYSVAFSPNGRYLASGSLDG--CVHIWSTKTGKLVKSYQ-GTGGIFELCWNAAGDKLGACASD 514 (524)
T ss_pred eeccCC--CceEEEEecCCCcEEEecCCCC--eeEeccccchheeEeec-CCCeEEEEEEcCCCCEEEEEecC
Confidence 666776 6788899998777777777775 67888888888755554 45667788999999988776654
No 202
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=98.48 E-value=2.4e-06 Score=82.68 Aligned_cols=230 Identities=16% Similarity=0.176 Sum_probs=135.2
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc--ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA--LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~--~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
+-.+.||-|...|| .|+....|.||.++||..+... ...-....+.||.|++.|+-.+++
T Consensus 266 Vlci~FSRDsEMlA-----sGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD------------- 327 (508)
T KOG0275|consen 266 VLCISFSRDSEMLA-----SGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFD------------- 327 (508)
T ss_pred eEEEeecccHHHhh-----ccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhccccc-------------
Confidence 44677899988888 5566678999999999865311 111124789999999999876543
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
+.+..|-+.++. ++-+...+..|+....+++||.+|+-.+++++ +-+|+..+.++- ..
T Consensus 328 ------~tvRiHGlKSGK----~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgt-----vkvW~~KtteC~-~T------ 385 (508)
T KOG0275|consen 328 ------QTVRIHGLKSGK----CLKEFRGHSSYVNEATFTDDGHHIISASSDGT-----VKVWHGKTTECL-ST------ 385 (508)
T ss_pred ------ceEEEeccccch----hHHHhcCccccccceEEcCCCCeEEEecCCcc-----EEEecCcchhhh-hh------
Confidence 457777776654 23233345567778899999999987765544 556676664331 11
Q ss_pred CCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccC-CCCCceeEEEEecCCEEEEEEecC
Q 004766 292 LLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPE-AERDVLESATAVNLNQMIVSYLSD 370 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~l~~~~~~~~~~l~~~~~~~ 370 (732)
++.+-.+........-|.+..-++++|+. ..+|.+++.+.. .+..... ++....-...+++.+..++...++
T Consensus 386 ---fk~~~~d~~vnsv~~~PKnpeh~iVCNrs---ntv~imn~qGQv-VrsfsSGkREgGdFi~~~lSpkGewiYcigED 458 (508)
T KOG0275|consen 386 ---FKPLGTDYPVNSVILLPKNPEHFIVCNRS---NTVYIMNMQGQV-VRSFSSGKREGGDFINAILSPKGEWIYCIGED 458 (508)
T ss_pred ---ccCCCCcccceeEEEcCCCCceEEEEcCC---CeEEEEeccceE-EeeeccCCccCCceEEEEecCCCcEEEEEccC
Confidence 11221111111112335444445567764 368899887653 3333322 222233344555534444444455
Q ss_pred CeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEe
Q 004766 371 VKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFT 413 (732)
Q Consensus 371 g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~s 413 (732)
..+|-+...+|+..+.++.....+-+++..|..+ ++.+|+
T Consensus 459 --~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqN-llAsYs 498 (508)
T KOG0275|consen 459 --GVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQN-LLASYS 498 (508)
T ss_pred --cEEEEEEeecCceeeeeecccccccccccCcccc-hhhhhc
Confidence 3688888878887566665544444666666655 333443
No 203
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.47 E-value=2.9e-06 Score=84.61 Aligned_cols=228 Identities=13% Similarity=0.075 Sum_probs=124.6
Q ss_pred CeeEEEEEEE-cCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCcc
Q 004766 462 STKIPMFIVS-KKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQN 540 (732)
Q Consensus 462 ~~~i~~~~~~-p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~ 540 (732)
+++++.-+++ ..+ -.+.|.++.+||-+|+.. .|..--..+-...|--++.+|.|..|..-.. ....+..
T Consensus 35 p~~l~y~~~~~~~~---~~~~Pp~i~lHGl~GS~~--Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~-----~~h~~~~ 104 (315)
T KOG2382|consen 35 PVRLAYDSVYSSEN---LERAPPAIILHGLLGSKE--NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI-----TVHNYEA 104 (315)
T ss_pred Ccccceeeeecccc---cCCCCceEEecccccCCC--CHHHHHHHhcccccCceEEEecccCCCCccc-----cccCHHH
Confidence 3566666653 222 368899999999999863 3332222333445778999999988764211 1112233
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEecChhH-HHHHHHHhhCCCeeeEEEE-c-CCc-cc--------ccccc---cCC
Q 004766 541 CFDDFISASEYLISAGYTQSRKLCIEGGSNGG-LLVGACINQRPDLFGCALA-H-VGV-MD--------MLRYH---KFT 605 (732)
Q Consensus 541 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG-~l~~~~~~~~p~~f~a~v~-~-~p~-~d--------~~~~~---~~~ 605 (732)
..+|+...++...... --.++.|.|||||| -++++....+|++..-+|+ . +|- +. ++.++ ...
T Consensus 105 ma~dv~~Fi~~v~~~~--~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~ 182 (315)
T KOG2382|consen 105 MAEDVKLFIDGVGGST--RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLS 182 (315)
T ss_pred HHHHHHHHHHHccccc--ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhcccc
Confidence 3445555444443322 23579999999999 5555555567887544443 2 331 10 00011 000
Q ss_pred ----CCCc-----------------cc------------ccc-CCC-CCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCC
Q 004766 606 ----IGHA-----------------WV------------SDF-GCS-EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYP 650 (732)
Q Consensus 606 ----~~~~-----------------~~------------~~~-g~p-~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~ 650 (732)
.+.. |. ..| ++. ...+.+..+...++-...... ....
T Consensus 183 ~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~--------~~~~ 254 (315)
T KOG2382|consen 183 IGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDG--------PYTG 254 (315)
T ss_pred ccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhccccccccc--------cccc
Confidence 0000 00 001 011 011222332233332222211 3678
Q ss_pred eEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 004766 651 STLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 651 p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 725 (732)
|+|+++|.++..|+..+-..+.... ..++++..+++||+...+..+ +....+.+|+..+
T Consensus 255 pvlfi~g~~S~fv~~~~~~~~~~~f--------------p~~e~~~ld~aGHwVh~E~P~--~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 255 PVLFIKGLQSKFVPDEHYPRMEKIF--------------PNVEVHELDEAGHWVHLEKPE--EFIESISEFLEEP 313 (315)
T ss_pred ceeEEecCCCCCcChhHHHHHHHhc--------------cchheeecccCCceeecCCHH--HHHHHHHHHhccc
Confidence 9999999999999987644443332 237999999999998765543 4555667787654
No 204
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.47 E-value=0.00026 Score=70.79 Aligned_cols=255 Identities=15% Similarity=0.152 Sum_probs=129.5
Q ss_pred EEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC-Cce
Q 004766 92 KYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED-QIV 170 (732)
Q Consensus 92 ~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~-g~~ 170 (732)
.+|-.-+.+....-.-|..+..+|. -.+++...+..... ..+++++||++|.-+ +..+ ..|.|..+.. |..
T Consensus 53 ~LY~v~~~~~~ggvaay~iD~~~G~-Lt~ln~~~~~g~~p---~yvsvd~~g~~vf~A-nY~~---g~v~v~p~~~dG~l 124 (346)
T COG2706 53 HLYVVNEPGEEGGVAAYRIDPDDGR-LTFLNRQTLPGSPP---CYVSVDEDGRFVFVA-NYHS---GSVSVYPLQADGSL 124 (346)
T ss_pred EEEEEEecCCcCcEEEEEEcCCCCe-EEEeeccccCCCCC---eEEEECCCCCEEEEE-EccC---ceEEEEEcccCCcc
Confidence 3443333433333334555433333 34444443332233 367899999977544 4333 2577777743 442
Q ss_pred ecc-----cccc--------eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEe
Q 004766 171 EAD-----ALSW--------FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWK 237 (732)
Q Consensus 171 ~~~-----~~~~--------~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~ 237 (732)
... ..+. .......+.||++.|+.... ...+|+.+++..+.-+....+.
T Consensus 125 ~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DL------------------G~Dri~~y~~~dg~L~~~~~~~ 186 (346)
T COG2706 125 QPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDL------------------GTDRIFLYDLDDGKLTPADPAE 186 (346)
T ss_pred ccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeec------------------CCceEEEEEcccCccccccccc
Confidence 110 0000 01245678999998887632 2336777777654322111111
Q ss_pred cCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccce----EEEEEecC
Q 004766 238 DPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ----YEVIANDD 313 (732)
Q Consensus 238 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~s~dg 313 (732)
.+...+ -..+.|.|+||++.+...-.. +-.+|-++-..++ ++.+ +....+-.++... --.+++||
T Consensus 187 v~~G~G-PRHi~FHpn~k~aY~v~EL~s--tV~v~~y~~~~g~--~~~l------Q~i~tlP~dF~g~~~~aaIhis~dG 255 (346)
T COG2706 187 VKPGAG-PRHIVFHPNGKYAYLVNELNS--TVDVLEYNPAVGK--FEEL------QTIDTLPEDFTGTNWAAAIHISPDG 255 (346)
T ss_pred cCCCCC-cceEEEcCCCcEEEEEeccCC--EEEEEEEcCCCce--EEEe------eeeccCccccCCCCceeEEEECCCC
Confidence 111111 136789999999876653322 3445555543322 1000 0011122222221 11378998
Q ss_pred CeEEEEeCCCCCCceEEEEeCCCCC-CceEeccCCCCCceeEEEEecCCEEEEEEecCC-eeEEEEEeCCCCce
Q 004766 314 TVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEAERDVLESATAVNLNQMIVSYLSDV-KYVLQIRDLKNGSL 385 (732)
Q Consensus 314 ~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g-~~~l~~~d~~~g~~ 385 (732)
+.|| .+|++.....++.+|..++. .....++ .+...-.+|.+.+++.+++...+++ .-.++..|.++|+.
T Consensus 256 rFLY-asNRg~dsI~~f~V~~~~g~L~~~~~~~-teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L 327 (346)
T COG2706 256 RFLY-ASNRGHDSIAVFSVDPDGGKLELVGITP-TEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRL 327 (346)
T ss_pred CEEE-EecCCCCeEEEEEEcCCCCEEEEEEEec-cCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceE
Confidence 7665 78988766777888877765 1111122 1223346778877555444444443 34667777777765
No 205
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=98.43 E-value=6.9e-06 Score=89.08 Aligned_cols=195 Identities=11% Similarity=0.073 Sum_probs=120.7
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+.+.+||||.++|. +.+|..++++|.+.+-..+.. ..+......+.|+|-| .||++.-
T Consensus 452 GPVyg~sFsPd~rfLl-----ScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~G--yYFatas------------ 512 (707)
T KOG0263|consen 452 GPVYGCSFSPDRRFLL-----SCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRG--YYFATAS------------ 512 (707)
T ss_pred Cceeeeeeccccccee-----eccCCcceeeeecccceeEEEecCCCcceeeEEecCCc--eEEEecC------------
Confidence 3467889999999887 335667899999988764322 2222223567889876 4444321
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
......+|......... +|.+.-.+ +.-+.|.|++.|++-.+.+ ..+.+||..+|.
T Consensus 513 -----~D~tArLWs~d~~~PlR--ifaghlsD--V~cv~FHPNs~Y~aTGSsD-----~tVRlWDv~~G~---------- 568 (707)
T KOG0263|consen 513 -----HDQTARLWSTDHNKPLR--IFAGHLSD--VDCVSFHPNSNYVATGSSD-----RTVRLWDVSTGN---------- 568 (707)
T ss_pred -----CCceeeeeecccCCchh--hhcccccc--cceEEECCcccccccCCCC-----ceEEEEEcCCCc----------
Confidence 11122333333322222 33222111 1237899999998755432 336677877653
Q ss_pred CCCCcEEeeecccceEE--EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 291 GLLPFVKLIDGFDAQYE--VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
..++..+....+. .+||+|..|.- ++..+.|..+|+.++.....+..|. ..+.++.++.++.+++...
T Consensus 569 ----~VRiF~GH~~~V~al~~Sp~Gr~LaS----g~ed~~I~iWDl~~~~~v~~l~~Ht--~ti~SlsFS~dg~vLasgg 638 (707)
T KOG0263|consen 569 ----SVRIFTGHKGPVTALAFSPCGRYLAS----GDEDGLIKIWDLANGSLVKQLKGHT--GTIYSLSFSRDGNVLASGG 638 (707)
T ss_pred ----EEEEecCCCCceEEEEEcCCCceEee----cccCCcEEEEEcCCCcchhhhhccc--CceeEEEEecCCCEEEecC
Confidence 2344444433333 58999987663 2335679999999887556667774 6788899998777777766
Q ss_pred cCCeeEEEEEeCC
Q 004766 369 SDVKYVLQIRDLK 381 (732)
Q Consensus 369 ~~g~~~l~~~d~~ 381 (732)
.| ..|.+||+.
T Consensus 639 ~D--nsV~lWD~~ 649 (707)
T KOG0263|consen 639 AD--NSVRLWDLT 649 (707)
T ss_pred CC--CeEEEEEch
Confidence 55 578889975
No 206
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.41 E-value=1.1e-05 Score=87.47 Aligned_cols=83 Identities=17% Similarity=0.088 Sum_probs=59.1
Q ss_pred HHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHH----HHHHHHHHHHcCCCCCCcEEEEecChhHHHHHH-
Q 004766 503 RTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDD----FISASEYLISAGYTQSRKLCIEGGSNGGLLVGA- 577 (732)
Q Consensus 503 ~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D----~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~- 577 (732)
+..+|.++|+.|++++.|.-+... +..+++| +.+|++.+.+. +..++|-++|+|+||.+++.
T Consensus 239 lVr~lv~qG~~VflIsW~nP~~~~-----------r~~~ldDYv~~i~~Ald~V~~~--tG~~~vnl~GyC~GGtl~a~~ 305 (560)
T TIGR01839 239 FVQYCLKNQLQVFIISWRNPDKAH-----------REWGLSTYVDALKEAVDAVRAI--TGSRDLNLLGACAGGLTCAAL 305 (560)
T ss_pred HHHHHHHcCCeEEEEeCCCCChhh-----------cCCCHHHHHHHHHHHHHHHHHh--cCCCCeeEEEECcchHHHHHH
Confidence 455566699999999999865321 1223344 44556665544 55679999999999999886
Q ss_pred ---HHhhCCC-eeeEEEEcCCcccc
Q 004766 578 ---CINQRPD-LFGCALAHVGVMDM 598 (732)
Q Consensus 578 ---~~~~~p~-~f~a~v~~~p~~d~ 598 (732)
+++++++ +.+.++..+..+|.
T Consensus 306 ~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 306 VGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred HHHHHhcCCCCceeeEEeeeccccc
Confidence 6677786 78888877776664
No 207
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.40 E-value=1.3e-05 Score=78.05 Aligned_cols=139 Identities=22% Similarity=0.199 Sum_probs=78.6
Q ss_pred EEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCc-EEEEEcccC---------CCC
Q 004766 455 FVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGA-VFCIANIRG---------GGE 524 (732)
Q Consensus 455 ~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~-~v~~~~~rG---------~g~ 524 (732)
.+.|.++..+-.+++..|++..+++.+|+|-+.=|.--. +.....+...+++.=. +.+...++. ...
T Consensus 13 ~l~s~~~~~~yri~i~~P~~~~~~~~YpVlY~lDGn~vf---~~~~~~~~~~~~~~~~~~iv~iGye~~~~~~~~~r~~D 89 (264)
T COG2819 13 DLKSANTGRKYRIFIATPKNYPKPGGYPVLYMLDGNAVF---NALTEIMLRILADLPPPVIVGIGYETILVFDPNRRAYD 89 (264)
T ss_pred eeeecCCCcEEEEEecCCCCCCCCCCCcEEEEecchhhh---chHHHHhhhhhhcCCCceEEEecccccccccccccccc
Confidence 344444326778899999998766679977666554211 1222222334442221 122222221 122
Q ss_pred CchhH--H-hcc-----ccc-CCccHHHHH-HHHHHHHHHcC-CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcC
Q 004766 525 YGEEW--H-KGG-----ALA-KKQNCFDDF-ISASEYLISAG-YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHV 593 (732)
Q Consensus 525 ~g~~~--~-~~~-----~~~-~~~~~~~D~-~~~~~~l~~~~-~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~ 593 (732)
|-..- . .+. ... .+...|.+| ..-+.=++++. -++++|.+|+|+|+||++++.++..+|+.|.+.++.+
T Consensus 90 yTp~~~~~~~~~~~~~~~~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~S 169 (264)
T COG2819 90 YTPPSANAIVASSRDGFYQFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLIS 169 (264)
T ss_pred CCCCCCCcccccccCCCCCCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeec
Confidence 21110 0 000 011 122234333 34455455554 4789999999999999999999999999999999998
Q ss_pred Ccc
Q 004766 594 GVM 596 (732)
Q Consensus 594 p~~ 596 (732)
|-+
T Consensus 170 PSl 172 (264)
T COG2819 170 PSL 172 (264)
T ss_pred chh
Confidence 843
No 208
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.38 E-value=1.3e-06 Score=88.61 Aligned_cols=130 Identities=13% Similarity=0.069 Sum_probs=89.7
Q ss_pred EEEEEEEcc-CCCeeEEEEEEEcCCCC---CCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCc
Q 004766 451 VHQVFVPSK-DGSTKIPMFIVSKKNIK---LDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 526 (732)
Q Consensus 451 ~~~~~~~s~-dG~~~i~~~~~~p~~~~---~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g 526 (732)
...+++... .+ -+++..++.|.... .-.+.|+|++.||...... .|.. ....+++.||+|+.++..|+..-+
T Consensus 38 ~~~i~~~~~~r~-~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~--~f~~-~A~~lAs~Gf~Va~~~hpgs~~~~ 113 (365)
T COG4188 38 FVTITLNDPQRD-RERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVT--GFAW-LAEHLASYGFVVAAPDHPGSNAGG 113 (365)
T ss_pred EEEEeccCcccC-CccccceeccCCCccccccCcCCeEEecCCCCCCcc--chhh-hHHHHhhCceEEEeccCCCccccc
Confidence 344555443 24 58888988887642 1148999999999755432 3332 245567799999999999986555
Q ss_pred hhHHhcccccCC----ccHHHHHHHHHHHHHHc-------CCCCCCcEEEEecChhHHHHHHHHhhCCC
Q 004766 527 EEWHKGGALAKK----QNCFDDFISASEYLISA-------GYTQSRKLCIEGGSNGGLLVGACINQRPD 584 (732)
Q Consensus 527 ~~~~~~~~~~~~----~~~~~D~~~~~~~l~~~-------~~~d~~~i~i~G~S~GG~l~~~~~~~~p~ 584 (732)
..-+..+..... .....|+-..+++|.+. +..|+.||++.|||+||+.++.++.-+.+
T Consensus 114 ~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 114 APAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred CChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 444444422211 12346888888888776 35789999999999999999998875544
No 209
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.37 E-value=1.9e-06 Score=82.76 Aligned_cols=116 Identities=19% Similarity=0.230 Sum_probs=77.5
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHh
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHK 531 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 531 (732)
+.+.++..++ ++..++..|. ....|++++.|||..+.. .|..-...+....-..++++|.||+|+.--+-..
T Consensus 51 edv~i~~~~~--t~n~Y~t~~~----~t~gpil~l~HG~G~S~L--SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~ 122 (343)
T KOG2564|consen 51 EDVSIDGSDL--TFNVYLTLPS----ATEGPILLLLHGGGSSAL--SFAIFASELKSKIRCRCLALDLRGHGETKVENED 122 (343)
T ss_pred cccccCCCcc--eEEEEEecCC----CCCccEEEEeecCcccch--hHHHHHHHHHhhcceeEEEeeccccCccccCChh
Confidence 4455555444 5566655554 246899999999866643 5554444555555677799999999975332222
Q ss_pred cccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhh
Q 004766 532 GGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 532 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 581 (732)
+ .....-.+||.+.++++... .+.+|.++||||||.++...+.+
T Consensus 123 d---lS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 123 D---LSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred h---cCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhh
Confidence 1 11223367888888888643 45689999999999999877765
No 210
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.37 E-value=0.0002 Score=75.84 Aligned_cols=210 Identities=14% Similarity=0.182 Sum_probs=107.3
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCC-Cceecc--c------------ccceeeeeEEEEeCCcEEEEEEecCC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIED-QIVEAD--A------------LSWFKFSSIAWTHDSKGFFYSRYPAP 200 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~-g~~~~~--~------------~~~~~~~~~~WspDg~~l~y~~~~~~ 200 (732)
.+.++|||++|..+ +..+. .+.++++.. |..... . ........+.++|||+.++..-.
T Consensus 91 ~i~~~~~g~~l~va-ny~~g---~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dl--- 163 (345)
T PF10282_consen 91 HIAVDPDGRFLYVA-NYGGG---SVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDL--- 163 (345)
T ss_dssp EEEECTTSSEEEEE-ETTTT---EEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEET---
T ss_pred EEEEecCCCEEEEE-EccCC---eEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEec---
Confidence 57799999988655 44433 577788765 442211 0 11112367899999998876531
Q ss_pred CCCCCCCCCCcccCCcccEEEEEECCCCCCC--CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCC-
Q 004766 201 KEGKDMDAGTETDSNLYHEFYYHFLGTKQSE--DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS- 277 (732)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~--~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~- 277 (732)
...+|+.+++...... .......+...+ -..+.++|||+++++... .. +.|.++++.
T Consensus 164 ---------------G~D~v~~~~~~~~~~~l~~~~~~~~~~G~G-PRh~~f~pdg~~~Yv~~e-~s---~~v~v~~~~~ 223 (345)
T PF10282_consen 164 ---------------GADRVYVYDIDDDTGKLTPVDSIKVPPGSG-PRHLAFSPDGKYAYVVNE-LS---NTVSVFDYDP 223 (345)
T ss_dssp ---------------TTTEEEEEEE-TTS-TEEEEEEEECSTTSS-EEEEEE-TTSSEEEEEET-TT---TEEEEEEEET
T ss_pred ---------------CCCEEEEEEEeCCCceEEEeeccccccCCC-CcEEEEcCCcCEEEEecC-CC---CcEEEEeecc
Confidence 2346888888654321 111112222222 246889999999876643 22 345555554
Q ss_pred -CCCCCcccccccCCCCCcEEee---eccc----ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-CceEeccCCC
Q 004766 278 -ALPEGLEGFKKRDGLLPFVKLI---DGFD----AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEAE 348 (732)
Q Consensus 278 -~~~~~~~~~~~~~~~~~~~~l~---~~~~----~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~~ 348 (732)
++. + .....+. .+.. ..-..++|||+.|| ++|++.....++.+|.+++. .....++-.
T Consensus 224 ~~g~--~---------~~~~~~~~~~~~~~~~~~~~~i~ispdg~~ly-vsnr~~~sI~vf~~d~~~g~l~~~~~~~~~- 290 (345)
T PF10282_consen 224 SDGS--L---------TEIQTISTLPEGFTGENAPAEIAISPDGRFLY-VSNRGSNSISVFDLDPATGTLTLVQTVPTG- 290 (345)
T ss_dssp TTTE--E---------EEEEEEESCETTSCSSSSEEEEEE-TTSSEEE-EEECTTTEEEEEEECTTTTTEEEEEEEEES-
T ss_pred cCCc--e---------eEEEEeeeccccccccCCceeEEEecCCCEEE-EEeccCCEEEEEEEecCCCceEEEEEEeCC-
Confidence 321 1 0011111 1111 11124899998776 57776544444444444444 111222222
Q ss_pred CCceeEEEEecCC-EEEEEEecCCeeEEEEEeCCCCce
Q 004766 349 RDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNGSL 385 (732)
Q Consensus 349 ~~~l~~~~~~~~~-~l~~~~~~~g~~~l~~~d~~~g~~ 385 (732)
...-..+.+++++ .|++.....+.-.++.+|.++|..
T Consensus 291 G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l 328 (345)
T PF10282_consen 291 GKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKL 328 (345)
T ss_dssp SSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred CCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcE
Confidence 2445778888754 555555555444555666667764
No 211
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.36 E-value=5.3e-06 Score=85.48 Aligned_cols=208 Identities=19% Similarity=0.251 Sum_probs=120.2
Q ss_pred EEEEE-cCCCCCCCCccEEEEEcCCC-CccCCCCc---ChhHHHHHHhcCcEEEEEcccCCC--CCchhHHhcccccCCc
Q 004766 467 MFIVS-KKNIKLDGSHPCLLYGYGGF-NISVTPSF---SVSRTILMRHLGAVFCIANIRGGG--EYGEEWHKGGALAKKQ 539 (732)
Q Consensus 467 ~~~~~-p~~~~~~~~~P~vv~~hG~~-~~~~~~~~---~~~~~~~l~~~G~~v~~~~~rG~g--~~g~~~~~~~~~~~~~ 539 (732)
.|++. |.+.++ +.-|+|||+|||. .....|.. ...+..++. ..++++.||.-.. +. ...-+
T Consensus 108 ~Wlvk~P~~~~p-k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~---------~~~yP 175 (374)
T PF10340_consen 108 YWLVKAPNRFKP-KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEH---------GHKYP 175 (374)
T ss_pred EEEEeCCcccCC-CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccC---------CCcCc
Confidence 56666 555432 3459999999983 33323321 112334444 4588899987543 11 22334
Q ss_pred cHHHHHHHHHHHHH-HcCCCCCCcEEEEecChhHHHHHHHHhh--CCC---eeeEEEEcCCcccccccccCCCCCcc---
Q 004766 540 NCFDDFISASEYLI-SAGYTQSRKLCIEGGSNGGLLVGACINQ--RPD---LFGCALAHVGVMDMLRYHKFTIGHAW--- 610 (732)
Q Consensus 540 ~~~~D~~~~~~~l~-~~~~~d~~~i~i~G~S~GG~l~~~~~~~--~p~---~f~a~v~~~p~~d~~~~~~~~~~~~~--- 610 (732)
..+.+.++..++|+ +.|. ++|.++|-||||.|++.++.. .+. .-+.+|+.+|.+++..... .....+
T Consensus 176 tQL~qlv~~Y~~Lv~~~G~---~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~-~~~~~~~~n 251 (374)
T PF10340_consen 176 TQLRQLVATYDYLVESEGN---KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDS-QEGSSYHDN 251 (374)
T ss_pred hHHHHHHHHHHHHHhccCC---CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCC-CCCcccccc
Confidence 55789999999999 5564 589999999999999887652 111 2478999999998862111 000000
Q ss_pred ----------ccccCC----CCCHHHHHHHHhcCcccCCCC-----CCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHH
Q 004766 611 ----------VSDFGC----SEEEEEFYWLIKYSPLHNVRR-----PWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKL 671 (732)
Q Consensus 611 ----------~~~~g~----p~~~~~~~~~~~~sp~~~~~~-----~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~ 671 (732)
...|+. ..+++. .....|+.++.. .|+.- ....-+||+.|+++- --.+.++|
T Consensus 252 ~~~D~l~~~~~~~~~~~y~~~~~~~~---~~~~~~~~n~~~n~d~~~W~~I----~~~~~vfVi~Ge~Ev--frddI~~~ 322 (374)
T PF10340_consen 252 EKRDMLSYKGLSMFGDAYIGNNDPEN---DLNSLPFVNIEYNFDAEDWKDI----LKKYSVFVIYGEDEV--FRDDILEW 322 (374)
T ss_pred ccccccchhhHHHHHHhhcccccccc---ccccCCccCcccCCChhHHHHh----ccCCcEEEEECCccc--cHHHHHHH
Confidence 001110 001110 011233333321 12110 023479999999774 45589999
Q ss_pred HHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCC
Q 004766 672 LATMQYVLCTSLENSPQTNPIIGRIERKAGHGV 704 (732)
Q Consensus 672 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 704 (732)
++++..... ..-+.+....+.+++.|..
T Consensus 323 ~~~~~~~~~-----~~~~~~~nv~~~~~G~Hi~ 350 (374)
T PF10340_consen 323 AKKLNDVKP-----NKFSNSNNVYIDEGGIHIG 350 (374)
T ss_pred HHHHhhcCc-----cccCCcceEEEecCCcccc
Confidence 999986510 0013356777888999975
No 212
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=98.35 E-value=0.00016 Score=70.52 Aligned_cols=255 Identities=16% Similarity=0.132 Sum_probs=136.5
Q ss_pred eCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce-----ecccccceeeeeEEEEeCCcEEEEE
Q 004766 121 LDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV-----EADALSWFKFSSIAWTHDSKGFFYS 195 (732)
Q Consensus 121 ~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~-----~~~~~~~~~~~~~~WspDg~~l~y~ 195 (732)
++.+.|. ++.-.+..+.||.||++||-... ...|++|++..-+. +....+-.....++|+||-+.|++.
T Consensus 77 l~~~~LK-gH~~~vt~~~FsSdGK~lat~~~-----Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~ 150 (420)
T KOG2096|consen 77 LNVSVLK-GHKKEVTDVAFSSDGKKLATISG-----DRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVS 150 (420)
T ss_pred hhhhhhh-ccCCceeeeEEcCCCceeEEEeC-----CceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEE
Confidence 3556663 55567889999999999997742 25899999875321 1111111123678999999998887
Q ss_pred EecCCCCCCCCCCCCcccCCcccEEEEEECCCCCC---C------CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCc
Q 004766 196 RYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS---E------DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCD 266 (732)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~---~------~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 266 (732)
.. +...|+++.+..... . |-+-|+... .....++...-.+++|+-.+.
T Consensus 151 ~~------------------~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh-~v~~i~iGiA~~~k~imsas~---- 207 (420)
T KOG2096|consen 151 VK------------------RGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKH-QVDIINIGIAGNAKYIMSASL---- 207 (420)
T ss_pred Ec------------------cCCEEEEEEeeecccCCCCcccccccccccchhc-ccceEEEeecCCceEEEEecC----
Confidence 53 233455555432110 0 101111111 112345666667788765543
Q ss_pred ceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-cccceEEEEEecCCeEEEEeCCCCCCceEEEEeC-CCCC--Cce-
Q 004766 267 PVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDL-KEPN--DWF- 341 (732)
Q Consensus 267 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~-~~~~--~~~- 341 (732)
.++|.++++.+.- +..+-. ....-...+||+|+.++. +.- .+..++|..=. ..+. +..
T Consensus 208 -dt~i~lw~lkGq~--------------L~~idtnq~~n~~aavSP~GRFia~-~gF-TpDVkVwE~~f~kdG~fqev~r 270 (420)
T KOG2096|consen 208 -DTKICLWDLKGQL--------------LQSIDTNQSSNYDAAVSPDGRFIAV-SGF-TPDVKVWEPIFTKDGTFQEVKR 270 (420)
T ss_pred -CCcEEEEecCCce--------------eeeeccccccccceeeCCCCcEEEE-ecC-CCCceEEEEEeccCcchhhhhh
Confidence 2568999988521 111111 111112358999876553 322 23445554322 1222 111
Q ss_pred --EeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCC----CCc---eeeecccc---cc-eeeEeecccCCcEE
Q 004766 342 --EVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLK----NGS---LLHQLPIE---IG-SVNAISARREDSVV 408 (732)
Q Consensus 342 --~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~----~g~---~~~~l~~~---~g-~v~~~~~s~d~~~l 408 (732)
.|-.+. ..+..+.++++..-.++.+.||. +.+||.+ .++ .++.-+.| .| ..-.++.+|.|+.+
T Consensus 271 vf~LkGH~--saV~~~aFsn~S~r~vtvSkDG~--wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~l 346 (420)
T KOG2096|consen 271 VFSLKGHQ--SAVLAAAFSNSSTRAVTVSKDGK--WRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSL 346 (420)
T ss_pred hheeccch--hheeeeeeCCCcceeEEEecCCc--EEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEE
Confidence 222332 34567778876677778888874 4455542 122 12222122 11 11256788999988
Q ss_pred EEEEecCCCCceEEEEECCCCC
Q 004766 409 FISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 409 ~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.+++.| .+-.+..++|+
T Consensus 347 A~s~gs-----~l~~~~se~g~ 363 (420)
T KOG2096|consen 347 AVSFGS-----DLKVFASEDGK 363 (420)
T ss_pred EeecCC-----ceEEEEcccCc
Confidence 877665 45566665553
No 213
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=98.34 E-value=0.00014 Score=72.37 Aligned_cols=202 Identities=12% Similarity=0.041 Sum_probs=121.3
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
+.-++-.++.+|+.+++| .|.+.-.-++|++.+|+..- .+...-.+....||-||..|+-.
T Consensus 63 H~~svFavsl~P~~~l~a-----TGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATG------------- 124 (399)
T KOG0296|consen 63 HTDSVFAVSLHPNNNLVA-----TGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATG------------- 124 (399)
T ss_pred cCCceEEEEeCCCCceEE-----ecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEec-------------
Confidence 445677889999777766 22333467899999998432 12222235789999999877653
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
....+|.+|+..++..+.. +.++..+ +.-+.|.|-+..|+..+.++ .+|++.+..+.
T Consensus 125 ------dmsG~v~v~~~stg~~~~~-~~~e~~d---ieWl~WHp~a~illAG~~DG-----svWmw~ip~~~-------- 181 (399)
T KOG0296|consen 125 ------DMSGKVLVFKVSTGGEQWK-LDQEVED---IEWLKWHPRAHILLAGSTDG-----SVWMWQIPSQA-------- 181 (399)
T ss_pred ------CCCccEEEEEcccCceEEE-eecccCc---eEEEEecccccEEEeecCCC-----cEEEEECCCcc--------
Confidence 2344688888887754432 2222222 33578999888777665443 38888876521
Q ss_pred cCCCCCcEEeeecccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEE
Q 004766 289 RDGLLPFVKLIDGFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVS 366 (732)
Q Consensus 289 ~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~ 366 (732)
..++..+..... ..+.|||++++.... ++.|.+++++++...-.+... +...+..+.+.....+++.
T Consensus 182 ------~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~----dgti~~Wn~ktg~p~~~~~~~-e~~~~~~~~~~~~~~~~~~ 250 (399)
T KOG0296|consen 182 ------LCKVMSGHNSPCTCGEFIPDGKRILTGYD----DGTIIVWNPKTGQPLHKITQA-EGLELPCISLNLAGSTLTK 250 (399)
T ss_pred ------eeeEecCCCCCcccccccCCCceEEEEec----CceEEEEecCCCceeEEeccc-ccCcCCccccccccceeEe
Confidence 234444433322 248899999886544 457999999998733333322 1233344444443566666
Q ss_pred EecCCeeEEEEEeCCCCce
Q 004766 367 YLSDVKYVLQIRDLKNGSL 385 (732)
Q Consensus 367 ~~~~g~~~l~~~d~~~g~~ 385 (732)
.+.++ .++.....+|+.
T Consensus 251 g~~e~--~~~~~~~~sgKV 267 (399)
T KOG0296|consen 251 GNSEG--VACGVNNGSGKV 267 (399)
T ss_pred ccCCc--cEEEEccccceE
Confidence 66664 344445445553
No 214
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=98.34 E-value=0.00048 Score=65.93 Aligned_cols=197 Identities=14% Similarity=0.139 Sum_probs=108.3
Q ss_pred EEEeEEECCC-CcEEEEEEeccCCceEEEEEEECCCCce------ecccccceeeeeEEEEeCCcEEEEEEecCCCCCCC
Q 004766 133 ALIKVSVSED-AKYLAYALSYSGSDWATIKLMRIEDQIV------EADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 133 ~~~~~~~SPD-G~~la~~~~~~G~e~~~i~v~dl~~g~~------~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 205 (732)
.+-.++|+|- |..||- ++....|++|++.++.. +.+.-.. ...+++|||.|+.|+..+++.
T Consensus 16 r~W~~awhp~~g~ilAs-----cg~Dk~vriw~~~~~~s~~ck~vld~~hkr-sVRsvAwsp~g~~La~aSFD~------ 83 (312)
T KOG0645|consen 16 RVWSVAWHPGKGVILAS-----CGTDKAVRIWSTSSGDSWTCKTVLDDGHKR-SVRSVAWSPHGRYLASASFDA------ 83 (312)
T ss_pred cEEEEEeccCCceEEEe-----ecCCceEEEEecCCCCcEEEEEeccccchh-eeeeeeecCCCcEEEEeeccc------
Confidence 4668899998 775552 23336899999885431 1121111 257899999999999887654
Q ss_pred CCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccc
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG 285 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 285 (732)
.+-.|.-+.+.-+-+...++.++. +-.++||++|.+|+..+.+. .+|++......
T Consensus 84 -------------t~~Iw~k~~~efecv~~lEGHEnE--VK~Vaws~sG~~LATCSRDK-----SVWiWe~dedd----- 138 (312)
T KOG0645|consen 84 -------------TVVIWKKEDGEFECVATLEGHENE--VKCVAWSASGNYLATCSRDK-----SVWIWEIDEDD----- 138 (312)
T ss_pred -------------eEEEeecCCCceeEEeeeeccccc--eeEEEEcCCCCEEEEeeCCC-----eEEEEEecCCC-----
Confidence 334444443333333445554432 34789999999999887543 37887766421
Q ss_pred ccccCCCCCcEEeeecc-cceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceE---eccCCCCCceeEEEEecCC
Q 004766 286 FKKRDGLLPFVKLIDGF-DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFE---VIPEAERDVLESATAVNLN 361 (732)
Q Consensus 286 ~~~~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~---l~~~~~~~~l~~~~~~~~~ 361 (732)
+-....-|.... +.-...|.|.. .|+|....+. ..++|+-+. .. .|.. |-.+. ..+=.+.+.+.+
T Consensus 139 -----Efec~aVL~~HtqDVK~V~WHPt~-dlL~S~SYDn-TIk~~~~~~-dd-dW~c~~tl~g~~--~TVW~~~F~~~G 207 (312)
T KOG0645|consen 139 -----EFECIAVLQEHTQDVKHVIWHPTE-DLLFSCSYDN-TIKVYRDED-DD-DWECVQTLDGHE--NTVWSLAFDNIG 207 (312)
T ss_pred -----cEEEEeeeccccccccEEEEcCCc-ceeEEeccCC-eEEEEeecC-CC-CeeEEEEecCcc--ceEEEEEecCCC
Confidence 011111222211 12223577744 4555554432 356666543 22 2432 22222 244445555534
Q ss_pred EEEEEEecCCeeEEEE
Q 004766 362 QMIVSYLSDVKYVLQI 377 (732)
Q Consensus 362 ~l~~~~~~~g~~~l~~ 377 (732)
.-++...+++.-.|++
T Consensus 208 ~rl~s~sdD~tv~Iw~ 223 (312)
T KOG0645|consen 208 SRLVSCSDDGTVSIWR 223 (312)
T ss_pred ceEEEecCCcceEeee
Confidence 4455667776555655
No 215
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.32 E-value=7.4e-06 Score=78.21 Aligned_cols=201 Identities=13% Similarity=0.059 Sum_probs=111.1
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCC--
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY-- 557 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~-- 557 (732)
+.-++.+-|-|.+.+....|. .-|. .-+.++.+.++|-+.. .+..-++|+.+.++.|...-.
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~----~~lp-~~iel~avqlPGR~~r-----------~~ep~~~di~~Lad~la~el~~~ 70 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWS----RRLP-ADIELLAVQLPGRGDR-----------FGEPLLTDIESLADELANELLPP 70 (244)
T ss_pred CceEEEecCCCCCHHHHHHHH----hhCC-chhheeeecCCCcccc-----------cCCcccccHHHHHHHHHHHhccc
Confidence 344666666665544322332 2233 3478899999986531 122345677777777765532
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhC------CCeeeEEEEcCCcccccccccCCCCCccc---ccc-CCC----CCHHHH
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQR------PDLFGCALAHVGVMDMLRYHKFTIGHAWV---SDF-GCS----EEEEEF 623 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~p~~d~~~~~~~~~~~~~~---~~~-g~p----~~~~~~ 623 (732)
.--.-.+++||||||+++..++.+. |..|-..-+.+|..+--..........+. .++ |.| +|++..
T Consensus 71 ~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~ 150 (244)
T COG3208 71 LLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELM 150 (244)
T ss_pred cCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHH
Confidence 2224799999999999999887742 33333334455633221111100000111 123 344 454432
Q ss_pred -----------HHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCE
Q 004766 624 -----------YWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPI 692 (732)
Q Consensus 624 -----------~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 692 (732)
..+..|. ..... .+.+|+.++.|.+|..|.-.+...|.+.. +..+
T Consensus 151 ~l~LPilRAD~~~~e~Y~---~~~~~--------pl~~pi~~~~G~~D~~vs~~~~~~W~~~t-------------~~~f 206 (244)
T COG3208 151 ALFLPILRADFRALESYR---YPPPA--------PLACPIHAFGGEKDHEVSRDELGAWREHT-------------KGDF 206 (244)
T ss_pred HHHHHHHHHHHHHhcccc---cCCCC--------CcCcceEEeccCcchhccHHHHHHHHHhh-------------cCCc
Confidence 2222232 22221 37899999999999998766554444332 4568
Q ss_pred EEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 693 IGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 693 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
.++++ ++||++-....+ .+.+++.+.++
T Consensus 207 ~l~~f-dGgHFfl~~~~~------~v~~~i~~~l~ 234 (244)
T COG3208 207 TLRVF-DGGHFFLNQQRE------EVLARLEQHLA 234 (244)
T ss_pred eEEEe-cCcceehhhhHH------HHHHHHHHHhh
Confidence 99998 469998754332 34445555543
No 216
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.31 E-value=6.7e-05 Score=65.91 Aligned_cols=167 Identities=14% Similarity=0.073 Sum_probs=97.8
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccC--CCCCchhHHhcccccCCccH-HHHHHHHHHHHHHcC
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRG--GGEYGEEWHKGGALAKKQNC-FDDFISASEYLISAG 556 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG--~g~~g~~~~~~~~~~~~~~~-~~D~~~~~~~l~~~~ 556 (732)
..-+||+.||..++..++. .......|+.+|+.|+-+++.= .--+| ++ +-..+..+ -...+.++..|.+.
T Consensus 13 ~~~tilLaHGAGasmdSt~-m~~~a~~la~~G~~vaRfefpYma~Rrtg---~r--kPp~~~~t~~~~~~~~~aql~~~- 85 (213)
T COG3571 13 APVTILLAHGAGASMDSTS-MTAVAAALARRGWLVARFEFPYMAARRTG---RR--KPPPGSGTLNPEYIVAIAQLRAG- 85 (213)
T ss_pred CCEEEEEecCCCCCCCCHH-HHHHHHHHHhCceeEEEeecchhhhcccc---CC--CCcCccccCCHHHHHHHHHHHhc-
Confidence 3447888999876654444 3344556666999999998741 00000 00 00111112 23345555556655
Q ss_pred CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEE-cCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCC
Q 004766 557 YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALA-HVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNV 635 (732)
Q Consensus 557 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~-~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~ 635 (732)
.+..+++|.|.||||-++.+++..---.+.+.+| .+||.- =|.|+... ..++
T Consensus 86 -l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhp----------------pGKPe~~R----------t~HL 138 (213)
T COG3571 86 -LAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHP----------------PGKPEQLR----------TEHL 138 (213)
T ss_pred -ccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCC----------------CCCcccch----------hhhc
Confidence 3456899999999999988877641111444443 333321 13333221 1233
Q ss_pred CCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCC
Q 004766 636 RRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVG 705 (732)
Q Consensus 636 ~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 705 (732)
.. ++.|+||++|..|..=.-.+... ... ..+++++...++.|-..
T Consensus 139 ~g----------l~tPtli~qGtrD~fGtr~~Va~---y~l------------s~~iev~wl~~adHDLk 183 (213)
T COG3571 139 TG----------LKTPTLITQGTRDEFGTRDEVAG---YAL------------SDPIEVVWLEDADHDLK 183 (213)
T ss_pred cC----------CCCCeEEeecccccccCHHHHHh---hhc------------CCceEEEEeccCccccc
Confidence 33 78999999999998766555422 211 45789999999999763
No 217
>PRK10115 protease 2; Provisional
Probab=98.31 E-value=0.0008 Score=77.47 Aligned_cols=256 Identities=9% Similarity=-0.052 Sum_probs=138.8
Q ss_pred EeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccC-CceEEEEEEECC
Q 004766 88 KRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSG-SDWATIKLMRIE 166 (732)
Q Consensus 88 ~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G-~e~~~i~v~dl~ 166 (732)
++|.++.|.....+.+++.|++++..+|. .|.+ .+. + .. ..+.|++||+.|.|+....+ ....+||.+++.
T Consensus 136 pdg~~la~~~d~~G~E~~~l~v~d~~tg~--~l~~--~i~--~-~~-~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lg 207 (686)
T PRK10115 136 PDNTIMALAEDFLSRRQYGIRFRNLETGN--WYPE--LLD--N-VE-PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIG 207 (686)
T ss_pred CCCCEEEEEecCCCcEEEEEEEEECCCCC--CCCc--ccc--C-cc-eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECC
Confidence 45666777776667777778887765442 1111 111 0 11 35899999999999987543 234789999999
Q ss_pred CCc--e--ecccccceeeeeEEEEe-CCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCC
Q 004766 167 DQI--V--EADALSWFKFSSIAWTH-DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEH 241 (732)
Q Consensus 167 ~g~--~--~~~~~~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~ 241 (732)
++. . +-..... .+.-..|.+ |++++++..... ....+++++..........+...+.+
T Consensus 208 t~~~~d~lv~~e~~~-~~~~~~~~s~d~~~l~i~~~~~----------------~~~~~~l~~~~~~~~~~~~~~~~~~~ 270 (686)
T PRK10115 208 TPASQDELVYEEKDD-TFYVSLHKTTSKHYVVIHLASA----------------TTSEVLLLDAELADAEPFVFLPRRKD 270 (686)
T ss_pred CChhHCeEEEeeCCC-CEEEEEEEcCCCCEEEEEEECC----------------ccccEEEEECcCCCCCceEEEECCCC
Confidence 883 1 1111111 122234555 898887654332 23456776643222222334433332
Q ss_pred CeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc-cceEEEEEecCCeEEEEe
Q 004766 242 PKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF-DAQYEVIANDDTVFTFLT 320 (732)
Q Consensus 242 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~s 320 (732)
..+ .+ ...+..+++.++.+ ..+..|..+++.+ + ..++.++... +.....+...++.|++..
T Consensus 271 ~~~--~~--~~~~~~ly~~tn~~-~~~~~l~~~~~~~-~------------~~~~~l~~~~~~~~i~~~~~~~~~l~~~~ 332 (686)
T PRK10115 271 HEY--SL--DHYQHRFYLRSNRH-GKNFGLYRTRVRD-E------------QQWEELIPPRENIMLEGFTLFTDWLVVEE 332 (686)
T ss_pred CEE--EE--EeCCCEEEEEEcCC-CCCceEEEecCCC-c------------ccCeEEECCCCCCEEEEEEEECCEEEEEE
Confidence 222 22 23345666665443 2356787777763 1 1255666542 223333444477888877
Q ss_pred CCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEe--cC-CEEEEEEecC-CeeEEEEEeCCCCceeeecc
Q 004766 321 NKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAV--NL-NQMIVSYLSD-VKYVLQIRDLKNGSLLHQLP 390 (732)
Q Consensus 321 ~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~--~~-~~l~~~~~~~-g~~~l~~~d~~~g~~~~~l~ 390 (732)
++++ ..+|+.+++.++. ...|.-..+ ..+..+..+ .+ +.+++....- ....++.+|+++++. +.++
T Consensus 333 ~~~g-~~~l~~~~~~~~~-~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~~-~~l~ 402 (686)
T PRK10115 333 RQRG-LTSLRQINRKTRE-VIGIAFDDP-AYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGER-RVLK 402 (686)
T ss_pred EeCC-EEEEEEEcCCCCc-eEEecCCCC-ceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCcE-EEEE
Confidence 7655 5679999976544 444431211 222222332 11 4566555443 346999999986653 4443
No 218
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.29 E-value=5e-06 Score=88.47 Aligned_cols=113 Identities=9% Similarity=-0.060 Sum_probs=77.1
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHH-HHHHh-cCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRT-ILMRH-LGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG 556 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~-~~l~~-~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 556 (732)
...|++|++||.........|.+.+. .++.. ..+.|+++|.+|+|.... ..+. ..-...-+++.+.+++|.+..
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y--~~a~--~~t~~vg~~la~lI~~L~~~~ 114 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHY--PTSA--AYTKLVGKDVAKFVNWMQEEF 114 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCC--cccc--ccHHHHHHHHHHHHHHHHHhh
Confidence 45789999999866432234554333 33432 369999999999774321 1111 111222356667778877543
Q ss_pred CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 557 YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 557 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
-.+.+++-++|||+||.+++.++.+.|++++.++...|.
T Consensus 115 gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 115 NYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred CCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 357789999999999999999999999999998877663
No 219
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=98.29 E-value=0.00023 Score=72.92 Aligned_cols=245 Identities=9% Similarity=0.067 Sum_probs=138.1
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC--Cceec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED--QIVEA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~--g~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
..+..++|.|.-. |+.+...+| +++++-+++ ...++ ..+.........|+|+|+..++++
T Consensus 214 ~~I~sv~FHp~~p-lllvaG~d~----~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s------------ 276 (514)
T KOG2055|consen 214 GGITSVQFHPTAP-LLLVAGLDG----TLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTS------------ 276 (514)
T ss_pred CCceEEEecCCCc-eEEEecCCC----cEEEEEecCccChhheeeeeccCccceeeecCCCceEEEec------------
Confidence 3577899999766 445543333 455555543 33222 223333346788999999666653
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
++..-+|.|++.+.+...+-...+-. ...+..+.+|+|+++|++.... ..|+++...+++
T Consensus 277 ------~rrky~ysyDle~ak~~k~~~~~g~e-~~~~e~FeVShd~~fia~~G~~-----G~I~lLhakT~e-------- 336 (514)
T KOG2055|consen 277 ------GRRKYLYSYDLETAKVTKLKPPYGVE-EKSMERFEVSHDSNFIAIAGNN-----GHIHLLHAKTKE-------- 336 (514)
T ss_pred ------ccceEEEEeeccccccccccCCCCcc-cchhheeEecCCCCeEEEcccC-----ceEEeehhhhhh--------
Confidence 33445899999876543221111111 1234578899999999988653 458888776642
Q ss_pred cCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 289 RDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 289 ~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
. +..+.-.....-..|+.||++|+.... .+.||.+|+.........+.+. ...-..++.+.++.++++.+
T Consensus 337 ---l--i~s~KieG~v~~~~fsSdsk~l~~~~~----~GeV~v~nl~~~~~~~rf~D~G-~v~gts~~~S~ng~ylA~GS 406 (514)
T KOG2055|consen 337 ---L--ITSFKIEGVVSDFTFSSDSKELLASGG----TGEVYVWNLRQNSCLHRFVDDG-SVHGTSLCISLNGSYLATGS 406 (514)
T ss_pred ---h--hheeeeccEEeeEEEecCCcEEEEEcC----CceEEEEecCCcceEEEEeecC-ccceeeeeecCCCceEEecc
Confidence 0 111111111111247889988886533 3489999998876434443332 23334566666566777777
Q ss_pred cCCeeEEEEEeCCC----Cceeeecc-cc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 369 SDVKYVLQIRDLKN----GSLLHQLP-IE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 369 ~~g~~~l~~~d~~~----g~~~~~l~-~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+.|.-.| ||.++ +.. +.+. +. ...|+++.+++|+..|.+ .|-..+..+..+.+.+
T Consensus 407 ~~GiVNI--Yd~~s~~~s~~P-kPik~~dNLtt~Itsl~Fn~d~qiLAi--aS~~~knalrLVHvPS 468 (514)
T KOG2055|consen 407 DSGIVNI--YDGNSCFASTNP-KPIKTVDNLTTAITSLQFNHDAQILAI--ASRVKKNALRLVHVPS 468 (514)
T ss_pred CcceEEE--eccchhhccCCC-CchhhhhhhheeeeeeeeCcchhhhhh--hhhccccceEEEeccc
Confidence 7765444 45321 222 2332 11 235778888888875543 3444555666655544
No 220
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.27 E-value=5.3e-05 Score=76.90 Aligned_cols=125 Identities=13% Similarity=0.039 Sum_probs=77.2
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhc-------ccccC
Q 004766 465 IPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKG-------GALAK 537 (732)
Q Consensus 465 i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~-------~~~~~ 537 (732)
....++.|+.. .....|++|+..|-..........-....++. .|+.-++...+=.|..-..-... .....
T Consensus 77 a~~~~~~P~~~-~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~-~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~ 154 (348)
T PF09752_consen 77 ARFQLLLPKRW-DSPYRPVCIHLAGTGDHGFWRRRRLMARPLLK-EGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVM 154 (348)
T ss_pred eEEEEEECCcc-ccCCCceEEEecCCCccchhhhhhhhhhHHHH-cCcceEEEecccccccChhHhhcccccchhHHHHH
Confidence 34556677764 23568999999886543211111111235566 69998888754322221111110 00111
Q ss_pred CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 538 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
+...+.+..+.+.||.++|+. ++++.|.||||.++..+++..|....++-+.++
T Consensus 155 g~~~i~E~~~Ll~Wl~~~G~~---~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~ 208 (348)
T PF09752_consen 155 GRATILESRALLHWLEREGYG---PLGLTGISMGGHMAALAASNWPRPVALVPCLSW 208 (348)
T ss_pred HhHHHHHHHHHHHHHHhcCCC---ceEEEEechhHhhHHhhhhcCCCceeEEEeecc
Confidence 234467778889999999874 899999999999999999998986555444433
No 221
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.26 E-value=5.9e-06 Score=83.63 Aligned_cols=113 Identities=19% Similarity=0.164 Sum_probs=72.7
Q ss_pred CCccEEEEEcCCCCccCCCC--------cChhH---HHHHHhcCcEEEEEcccCCC--CCchhHHhcc----cccCCccH
Q 004766 479 GSHPCLLYGYGGFNISVTPS--------FSVSR---TILMRHLGAVFCIANIRGGG--EYGEEWHKGG----ALAKKQNC 541 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~--------~~~~~---~~~l~~~G~~v~~~~~rG~g--~~g~~~~~~~----~~~~~~~~ 541 (732)
.+..+||++||--|.+..-. |...+ -.-++..-|-|++.|.-||. ..|..-.... .......+
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 45678999999766433222 32211 11234455999999999874 2333221111 11223457
Q ss_pred HHHHHHHHHHHHHc-CCCCCCcEE-EEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 542 FDDFISASEYLISA-GYTQSRKLC-IEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 542 ~~D~~~~~~~l~~~-~~~d~~~i~-i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
+.|.+.+-+.|++. |+ +||. ++|+||||+.++..+..+||..+.+|..+.
T Consensus 129 i~D~V~aq~~ll~~LGI---~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~ 180 (368)
T COG2021 129 IRDMVRAQRLLLDALGI---KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIAT 180 (368)
T ss_pred HHHHHHHHHHHHHhcCc---ceEeeeeccChHHHHHHHHHHhChHHHhhhheecc
Confidence 88999988887665 54 3565 999999999999999999998766655443
No 222
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=98.26 E-value=0.00042 Score=67.30 Aligned_cols=242 Identities=12% Similarity=0.089 Sum_probs=135.2
Q ss_pred CCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce--ecccccceeeeeEEEEeCCcEEEEEEecCCCCCCC
Q 004766 128 DDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV--EADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 128 ~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~--~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 205 (732)
+++...+....|+|||..+|- +|.+ .+|++|++.+... -........+.++.|.+|++.|+-+..|
T Consensus 44 ~gh~geI~~~~F~P~gs~~aS----gG~D-r~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtD------- 111 (338)
T KOG0265|consen 44 PGHKGEIYTIKFHPDGSCFAS----GGSD-RAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTD------- 111 (338)
T ss_pred CCCcceEEEEEECCCCCeEee----cCCc-ceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCC-------
Confidence 345566788999999998872 4554 7899999765431 1111222235789999999988876433
Q ss_pred CCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccc
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG 285 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 285 (732)
.+|+.||..+++.. +....+..+...+..+.-|-.++.+.++. ..+.++|...+.+
T Consensus 112 ------------k~v~~wD~~tG~~~----rk~k~h~~~vNs~~p~rrg~~lv~SgsdD----~t~kl~D~R~k~~---- 167 (338)
T KOG0265|consen 112 ------------KTVRGWDAETGKRI----RKHKGHTSFVNSLDPSRRGPQLVCSGSDD----GTLKLWDIRKKEA---- 167 (338)
T ss_pred ------------ceEEEEecccceee----ehhccccceeeecCccccCCeEEEecCCC----ceEEEEeecccch----
Confidence 36899999887532 22223344555666666777777665543 3356667665321
Q ss_pred ccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEE
Q 004766 286 FKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIV 365 (732)
Q Consensus 286 ~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~ 365 (732)
.+.....+......|...++.+.. ++-+..|-.+|+......-.+..+. ..|.++..++.+..++
T Consensus 168 ---------~~t~~~kyqltAv~f~d~s~qv~s----ggIdn~ikvWd~r~~d~~~~lsGh~--DtIt~lsls~~gs~ll 232 (338)
T KOG0265|consen 168 ---------IKTFENKYQLTAVGFKDTSDQVIS----GGIDNDIKVWDLRKNDGLYTLSGHA--DTITGLSLSRYGSFLL 232 (338)
T ss_pred ---------hhccccceeEEEEEecccccceee----ccccCceeeeccccCcceEEeeccc--CceeeEEeccCCCccc
Confidence 111111121111235555555442 2334567778886654233444444 6788888888555444
Q ss_pred EEecCCeeEEEEEeCC---CCceeeeccccccee-------eEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 366 SYLSDVKYVLQIRDLK---NGSLLHQLPIEIGSV-------NAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 366 ~~~~~g~~~l~~~d~~---~g~~~~~l~~~~g~v-------~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+-.-+ ..+.+||.. .++. .+..-.|.+ -..+++|++..+-+..++ ..+|.+|..+
T Consensus 233 snsMd--~tvrvwd~rp~~p~~R--~v~if~g~~hnfeknlL~cswsp~~~~i~ags~d----r~vyvwd~~~ 297 (338)
T KOG0265|consen 233 SNSMD--NTVRVWDVRPFAPSQR--CVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSAD----RFVYVWDTTS 297 (338)
T ss_pred ccccc--ceEEEEEecccCCCCc--eEEEeecchhhhhhhcceeeccCCCCcccccccc----ceEEEeeccc
Confidence 44333 367888864 2222 122111111 123567777655433332 3577777544
No 223
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.23 E-value=0.00043 Score=72.51 Aligned_cols=236 Identities=12% Similarity=0.109 Sum_probs=138.8
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec---ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA---DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~---~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..-++||-|+|++|-.. + ..|.|++..+-..+. ..+.+ +.+++|||-+.-|+|-.-..
T Consensus 308 WP~frWS~DdKy~Arm~---~---~sisIyEtpsf~lld~Kslki~g--Ir~FswsP~~~llAYwtpe~----------- 368 (698)
T KOG2314|consen 308 WPIFRWSHDDKYFARMT---G---NSISIYETPSFMLLDKKSLKISG--IRDFSWSPTSNLLAYWTPET----------- 368 (698)
T ss_pred cceEEeccCCceeEEec---c---ceEEEEecCceeeecccccCCcc--ccCcccCCCcceEEEEcccc-----------
Confidence 35688999999999774 2 367777766533322 22333 36899999999999975221
Q ss_pred cccCCcccEEEEEECCCCCCC-CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcc-------eEEEEEEeCCCCCCC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSE-DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDP-------VNKVYYCDLSALPEG 282 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~-~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~-------~~~l~~~d~~~~~~~ 282 (732)
...|.++-+..+-+.+.- ..-++... .+.+.|-.+|.||.+...+.... +-+|+.++-..
T Consensus 369 ---~~~parvtL~evPs~~~iRt~nlfnVs-----DckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKd---- 436 (698)
T KOG2314|consen 369 ---NNIPARVTLMEVPSKREIRTKNLFNVS-----DCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKD---- 436 (698)
T ss_pred ---cCCcceEEEEecCccceeeeccceeee-----ccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccC----
Confidence 245566666666554321 11122221 24678999999999988766521 23455554222
Q ss_pred cccccccCCCCCcEEeeecccceEE-EEEecCCeEEEEeCCC-CCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC
Q 004766 283 LEGFKKRDGLLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKD-APKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL 360 (732)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~-~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~ 360 (732)
.|+..+ .-.+.... .|.|.|+++.+++... ..+.+.|.+...... +. |+..-+......+.|++.
T Consensus 437 ----------Ipve~v-elke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~-~~-lVk~~dk~~~N~vfwsPk 503 (698)
T KOG2314|consen 437 ----------IPVEVV-ELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKK-PS-LVKELDKKFANTVFWSPK 503 (698)
T ss_pred ----------CCceee-ecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCc-hh-hhhhhcccccceEEEcCC
Confidence 223222 11112222 4999999999887654 345567776643333 33 444444455677889874
Q ss_pred -CEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEeecccCCcEEEEEEec
Q 004766 361 -NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFISFTS 414 (732)
Q Consensus 361 -~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~d~~~l~~~~ss 414 (732)
+.+++.......+.|..+|.+-... +.+..+ ....+.+.++|.|.++.-+.++
T Consensus 504 G~fvvva~l~s~~g~l~F~D~~~a~~-k~~~~~eh~~at~veWDPtGRYvvT~ss~ 558 (698)
T KOG2314|consen 504 GRFVVVAALVSRRGDLEFYDTDYADL-KDTASPEHFAATEVEWDPTGRYVVTSSSS 558 (698)
T ss_pred CcEEEEEEecccccceEEEecchhhh-hhccCccccccccceECCCCCEEEEeeeh
Confidence 4566666665567888888763222 334333 2234466788988866544444
No 224
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=98.23 E-value=2.7e-05 Score=76.08 Aligned_cols=194 Identities=15% Similarity=0.120 Sum_probs=109.1
Q ss_pred EEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCc
Q 004766 137 VSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNL 216 (732)
Q Consensus 137 ~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~ 216 (732)
.+|||+|++||-.. ++++.|.|.+|-+......--.+...+.|+.|+-.++.+....
T Consensus 14 c~fSp~g~yiAs~~------~yrlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~----------------- 70 (447)
T KOG4497|consen 14 CSFSPCGNYIASLS------RYRLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKD----------------- 70 (447)
T ss_pred eeECCCCCeeeeee------eeEEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeecc-----------------
Confidence 57999999999774 3689999998876443221111246789999998888775433
Q ss_pred ccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcE
Q 004766 217 YHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFV 296 (732)
Q Consensus 217 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 296 (732)
..|..|++..+.= .+-.++ ++.-..+..|||||+.|+..+. +..+|-++.+.+....+ .+.
T Consensus 71 -~~vqvwsl~Qpew--~ckIde--g~agls~~~WSPdgrhiL~tse----F~lriTVWSL~t~~~~~---------~~~- 131 (447)
T KOG4497|consen 71 -PKVQVWSLVQPEW--YCKIDE--GQAGLSSISWSPDGRHILLTSE----FDLRITVWSLNTQKGYL---------LPH- 131 (447)
T ss_pred -ceEEEEEeeccee--EEEecc--CCCcceeeeECCCcceEeeeec----ceeEEEEEEeccceeEE---------ecc-
Confidence 2477777764421 121222 1223457899999999987763 35667777776632110 000
Q ss_pred EeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC--CCCceeEEEEecCCEEEEEEecCCeeE
Q 004766 297 KLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA--ERDVLESATAVNLNQMIVSYLSDVKYV 374 (732)
Q Consensus 297 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~--~~~~l~~~~~~~~~~l~~~~~~~g~~~ 374 (732)
..... ....+.+||+...+.+.++-..+ +.+..-+.|..+ .+- +...+.++.|++|+..++....--.-.
T Consensus 132 -pK~~~--kg~~f~~dg~f~ai~sRrDCkdy----v~i~~c~~W~ll-~~f~~dT~DltgieWsPdg~~laVwd~~Leyk 203 (447)
T KOG4497|consen 132 -PKTNV--KGYAFHPDGQFCAILSRRDCKDY----VQISSCKAWILL-KEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYK 203 (447)
T ss_pred -cccCc--eeEEECCCCceeeeeecccHHHH----HHHHhhHHHHHH-HhcCCCcccccCceECCCCcEEEEecchhhhe
Confidence 00111 12247899998888877652221 111111123211 111 123467788988665555444333345
Q ss_pred EEEEeC
Q 004766 375 LQIRDL 380 (732)
Q Consensus 375 l~~~d~ 380 (732)
|+.+..
T Consensus 204 v~aYe~ 209 (447)
T KOG4497|consen 204 VYAYER 209 (447)
T ss_pred eeeeee
Confidence 555544
No 225
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=98.22 E-value=0.00013 Score=72.33 Aligned_cols=116 Identities=16% Similarity=0.190 Sum_probs=73.3
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
|+.-+...+|.+||..++-++ -|+ ..|.|||.++|..++.. .....++-+.|||||+.|+-++.+.
T Consensus 194 gh~pVtsmqwn~dgt~l~tAS--~gs--ssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~da--------- 260 (445)
T KOG2139|consen 194 GHNPVTSMQWNEDGTILVTAS--FGS--SSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDA--------- 260 (445)
T ss_pred CCceeeEEEEcCCCCEEeecc--cCc--ceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccc---------
Confidence 345688999999999887553 233 58999999998855433 2222357899999999998886543
Q ss_pred CCcccCCcccEEE-EEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCC
Q 004766 209 GTETDSNLYHEFY-YHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS 277 (732)
Q Consensus 209 ~~~~~~~~~~~v~-~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 277 (732)
..+|| .+..-|.+ ..+. .++......|||+|++|+|..+.. ..||-+...
T Consensus 261 --------vfrlw~e~q~wt~e---rw~l----gsgrvqtacWspcGsfLLf~~sgs----p~lysl~f~ 311 (445)
T KOG2139|consen 261 --------VFRLWQENQSWTKE---RWIL----GSGRVQTACWSPCGSFLLFACSGS----PRLYSLTFD 311 (445)
T ss_pred --------eeeeehhcccceec---ceec----cCCceeeeeecCCCCEEEEEEcCC----ceEEEEeec
Confidence 12233 11111111 1111 123456789999999999987542 345555443
No 226
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.21 E-value=0.0017 Score=68.51 Aligned_cols=236 Identities=11% Similarity=0.070 Sum_probs=115.6
Q ss_pred EEEEEeccCCceEEEEEEECCC-Cce--ecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEE
Q 004766 146 LAYALSYSGSDWATIKLMRIED-QIV--EADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYY 222 (732)
Q Consensus 146 la~~~~~~G~e~~~i~v~dl~~-g~~--~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 222 (732)
.+|+.+..+ ..|+++|+.+ |+. +...........++++||++.||.+... ...|..
T Consensus 3 ~~y~~~~~~---~~I~~~~~~~~g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~------------------~~~i~~ 61 (330)
T PRK11028 3 IVYIASPES---QQIHVWNLNHEGALTLLQVVDVPGQVQPMVISPDKRHLYVGVRP------------------EFRVLS 61 (330)
T ss_pred EEEEEcCCC---CCEEEEEECCCCceeeeeEEecCCCCccEEECCCCCEEEEEECC------------------CCcEEE
Confidence 456664332 4788889864 442 2111111223678999999988776421 134655
Q ss_pred EECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeec-
Q 004766 223 HFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG- 301 (732)
Q Consensus 223 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~- 301 (732)
+++.... .-..+-..+. ......+.++|||++|+..... ...+.+++++.... .........+
T Consensus 62 ~~~~~~g-~l~~~~~~~~-~~~p~~i~~~~~g~~l~v~~~~----~~~v~v~~~~~~g~----------~~~~~~~~~~~ 125 (330)
T PRK11028 62 YRIADDG-ALTFAAESPL-PGSPTHISTDHQGRFLFSASYN----ANCVSVSPLDKDGI----------PVAPIQIIEGL 125 (330)
T ss_pred EEECCCC-ceEEeeeecC-CCCceEEEECCCCCEEEEEEcC----CCeEEEEEECCCCC----------CCCceeeccCC
Confidence 6664211 1111111111 1122468899999998766432 24567777653110 0001111111
Q ss_pred ccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceE------eccCCCCCceeEEEEecCCEEEEEEecCCeeEE
Q 004766 302 FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFE------VIPEAERDVLESATAVNLNQMIVSYLSDVKYVL 375 (732)
Q Consensus 302 ~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~------l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l 375 (732)
.......++|+|+.+|+ ++.+ ...|..+|+++...... -++. ......+.+++++..++...+. ...|
T Consensus 126 ~~~~~~~~~p~g~~l~v-~~~~--~~~v~v~d~~~~g~l~~~~~~~~~~~~--g~~p~~~~~~pdg~~lyv~~~~-~~~v 199 (330)
T PRK11028 126 EGCHSANIDPDNRTLWV-PCLK--EDRIRLFTLSDDGHLVAQEPAEVTTVE--GAGPRHMVFHPNQQYAYCVNEL-NSSV 199 (330)
T ss_pred CcccEeEeCCCCCEEEE-eeCC--CCEEEEEEECCCCcccccCCCceecCC--CCCCceEEECCCCCEEEEEecC-CCEE
Confidence 11122248899887775 4433 23677777765321110 1111 1223457777765544444432 2577
Q ss_pred EEEeCC--CCce--eeecc-ccc-----ceeeEeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 376 QIRDLK--NGSL--LHQLP-IEI-----GSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 376 ~~~d~~--~g~~--~~~l~-~~~-----g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
.+|+++ +|+. ...+. .|. .....+.++|+++.++++- .....+..+++.
T Consensus 200 ~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~---~~~~~I~v~~i~ 258 (330)
T PRK11028 200 DVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACD---RTASLISVFSVS 258 (330)
T ss_pred EEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEec---CCCCeEEEEEEe
Confidence 777775 3332 12222 121 1122356789998777642 223456556553
No 227
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.20 E-value=7.2e-05 Score=83.68 Aligned_cols=118 Identities=12% Similarity=0.005 Sum_probs=72.8
Q ss_pred EEeEEECCCCcEEEEEEecc-------CCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYS-------GSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~-------G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
+..++|||||++|+|+.+.. .+...+|+++++++|+... ..++ ....+.|||||++|+|+..
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~-~~~g-~Issl~wSpDG~RiA~i~~--------- 467 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS-RVPG-PISELQLSRDGVRAAMIIG--------- 467 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh-ccCC-CcCeEEECCCCCEEEEEEC---------
Confidence 45899999999999886431 1223588999998887543 2222 2589999999999999851
Q ss_pred CCCCcccCCcccEEEE---EECCCCCCCC---eEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCC
Q 004766 207 DAGTETDSNLYHEFYY---HFLGTKQSED---ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~---~~lgt~~~~~---~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
.+|++ .+.+.+...- +.+...- ..-..++.|..|++.+ +... .. ...+|.+++++.
T Consensus 468 -----------g~v~Va~Vvr~~~G~~~l~~~~~l~~~l--~~~~~~l~W~~~~~L~-V~~~-~~--~~~v~~v~vDG~ 529 (591)
T PRK13616 468 -----------GKVYLAVVEQTEDGQYALTNPREVGPGL--GDTAVSLDWRTGDSLV-VGRS-DP--EHPVWYVNLDGS 529 (591)
T ss_pred -----------CEEEEEEEEeCCCCceeecccEEeeccc--CCccccceEecCCEEE-EEec-CC--CCceEEEecCCc
Confidence 14665 3333332110 0121111 1112468899999954 3332 22 456899998863
No 228
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=98.19 E-value=0.0011 Score=63.49 Aligned_cols=230 Identities=17% Similarity=0.135 Sum_probs=129.7
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
+..++-.+.++.|.++|. .|+...++++||+++|+.+.....+...-.+.|+++|..++++..+.
T Consensus 51 HtGavW~~Did~~s~~li-----TGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~---------- 115 (327)
T KOG0643|consen 51 HTGAVWCCDIDWDSKHLI-----TGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQ---------- 115 (327)
T ss_pred CCceEEEEEecCCcceee-----eccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhh----------
Confidence 445666777888888876 56666899999999999875444344456788999999999987544
Q ss_pred CcccCCcccEEEEEECCCCC----CCC-eEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 210 TETDSNLYHEFYYHFLGTKQ----SED-ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~----~~~-~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
.+....|.+.++.... ++. .+....++ .-...+-|+|-|++|+..-.++ .|-.+|+.++..
T Consensus 116 ----mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~--skit~a~Wg~l~~~ii~Ghe~G-----~is~~da~~g~~--- 181 (327)
T KOG0643|consen 116 ----MGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPD--SKITSALWGPLGETIIAGHEDG-----SISIYDARTGKE--- 181 (327)
T ss_pred ----cCcceEEEEEEccCChhhhcccCceEEecCCc--cceeeeeecccCCEEEEecCCC-----cEEEEEcccCce---
Confidence 3566677777775332 122 22222222 3346788999999997654333 367778877421
Q ss_pred cccccCCCCCcEEeeecccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-C
Q 004766 285 GFKKRDGLLPFVKLIDGFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-N 361 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~ 361 (732)
...-.......+ ..+++|... |++.......+ ++|..+-...++...+ ..+...++++- +
T Consensus 182 ----------~v~s~~~h~~~Ind~q~s~d~T~--FiT~s~Dttak--l~D~~tl~v~Kty~te---~PvN~aaisP~~d 244 (327)
T KOG0643|consen 182 ----------LVDSDEEHSSKINDLQFSRDRTY--FITGSKDTTAK--LVDVRTLEVLKTYTTE---RPVNTAAISPLLD 244 (327)
T ss_pred ----------eeechhhhccccccccccCCcce--EEecccCccce--eeeccceeeEEEeeec---ccccceecccccc
Confidence 000000000011 136776544 33332222333 4565555433444433 34566666662 5
Q ss_pred EEEEEEecCCeeEEEEEeCCCCc------------eeeecccccceeeEeecccCCc
Q 004766 362 QMIVSYLSDVKYVLQIRDLKNGS------------LLHQLPIEIGSVNAISARREDS 406 (732)
Q Consensus 362 ~l~~~~~~~g~~~l~~~d~~~g~------------~~~~l~~~~g~v~~~~~s~d~~ 406 (732)
++++-...++. .+..-+...|+ .+.++..+.|.+.+++++|+|+
T Consensus 245 ~VilgGGqeA~-dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGk 300 (327)
T KOG0643|consen 245 HVILGGGQEAM-DVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGK 300 (327)
T ss_pred eEEecCCceee-eeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCc
Confidence 66665444432 22222222232 1223333456778889999997
No 229
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.18 E-value=0.0023 Score=67.91 Aligned_cols=249 Identities=15% Similarity=0.068 Sum_probs=118.3
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc--------cceeeeeEEEEeCCcEEEEEEecCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL--------SWFKFSSIAWTHDSKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~--------~~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 205 (732)
..++.+||||++|+.+....+ ++.|+|.++.+++.... ...+..++.-||++..+++.-.+
T Consensus 80 ~~~i~~s~DG~~~~v~n~~~~----~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd------- 148 (369)
T PF02239_consen 80 PRGIAVSPDGKYVYVANYEPG----TVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKD------- 148 (369)
T ss_dssp EEEEEE--TTTEEEEEEEETT----EEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETT-------
T ss_pred cceEEEcCCCCEEEEEecCCC----ceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEcc-------
Confidence 457899999999976643332 78999999988654211 11123567778888877766432
Q ss_pred CCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccc
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG 285 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 285 (732)
..+||..+...... ..+-... -..+..+..|+|||+|++..... .+.+-++|++++.
T Consensus 149 -----------~~~I~vVdy~d~~~--~~~~~i~-~g~~~~D~~~dpdgry~~va~~~----sn~i~viD~~~~k----- 205 (369)
T PF02239_consen 149 -----------TGEIWVVDYSDPKN--LKVTTIK-VGRFPHDGGFDPDGRYFLVAANG----SNKIAVIDTKTGK----- 205 (369)
T ss_dssp -----------TTEEEEEETTTSSC--EEEEEEE---TTEEEEEE-TTSSEEEEEEGG----GTEEEEEETTTTE-----
T ss_pred -----------CCeEEEEEeccccc--cceeeec-ccccccccccCcccceeeecccc----cceeEEEeeccce-----
Confidence 23688888665421 1211111 12245678999999998765432 2467778876632
Q ss_pred ccccCCCCCcEEeee-ccc----ceEEEEEecCCeEEEEeCCCCCCceEEEEe------CCCCCCceEeccCCCCCceeE
Q 004766 286 FKKRDGLLPFVKLID-GFD----AQYEVIANDDTVFTFLTNKDAPKYKIIRVD------LKEPNDWFEVIPEAERDVLES 354 (732)
Q Consensus 286 ~~~~~~~~~~~~l~~-~~~----~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d------~~~~~~~~~l~~~~~~~~l~~ 354 (732)
...+.. +.. .......|....++...........++-.+ ..+-+..+++-... .. -.
T Consensus 206 ---------~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G--~g-lF 273 (369)
T PF02239_consen 206 ---------LVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQG--GG-LF 273 (369)
T ss_dssp ---------EEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SS--SS---
T ss_pred ---------EEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCC--Cc-ce
Confidence 111111 000 001111222222222222211100111112 11111112222122 11 22
Q ss_pred EEEecC-CEEEEEE-ecCCeeEEEEEeCCCCceeeecccccc-eeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 355 ATAVNL-NQMIVSY-LSDVKYVLQIRDLKNGSLLHQLPIEIG-SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 355 ~~~~~~-~~l~~~~-~~~g~~~l~~~d~~~g~~~~~l~~~~g-~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+...++ .++++.. .......|.++|.++-+....|....+ .+..+.+++||++++++.-.- -.++..||..+.+
T Consensus 274 i~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~--~~~i~v~D~~Tl~ 350 (369)
T PF02239_consen 274 IKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDG--NGAIVVYDAKTLK 350 (369)
T ss_dssp EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE----TTEEEEEETTTTE
T ss_pred eecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecC--CCEEEEEECCCcE
Confidence 444554 4555551 112246899999886655455543222 355788999999999875543 3389999987764
No 230
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.18 E-value=0.00041 Score=76.33 Aligned_cols=177 Identities=12% Similarity=0.052 Sum_probs=94.0
Q ss_pred cEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec-CCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcE
Q 004766 218 HEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFV 296 (732)
Q Consensus 218 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 296 (732)
..|.+|+++... -+.+|.. ..|+..++|.| |.+|.+ ..+- ..++.+|++...+ ..-|.
T Consensus 390 KTVRLWh~~~~~--CL~~F~H---ndfVTcVaFnPvDDryFi-SGSL----D~KvRiWsI~d~~-----------Vv~W~ 448 (712)
T KOG0283|consen 390 KTVRLWHPGRKE--CLKVFSH---NDFVTCVAFNPVDDRYFI-SGSL----DGKVRLWSISDKK-----------VVDWN 448 (712)
T ss_pred ccEEeecCCCcc--eeeEEec---CCeeEEEEecccCCCcEe-eccc----ccceEEeecCcCe-----------eEeeh
Confidence 368899998653 3466754 34888999999 566643 3322 2345566655421 00011
Q ss_pred EeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC---CceEeccC---CCCCceeEEEEecC--CEEEEEEe
Q 004766 297 KLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN---DWFEVIPE---AERDVLESATAVNL--NQMIVSYL 368 (732)
Q Consensus 297 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~---~~~~l~~~---~~~~~l~~~~~~~~--~~l~~~~~ 368 (732)
.+. .-.....++|||+..++-+-. +....++..+.+ .+..-... .....|.++.+.++ +.++|+..
T Consensus 449 Dl~--~lITAvcy~PdGk~avIGt~~----G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSn 522 (712)
T KOG0283|consen 449 DLR--DLITAVCYSPDGKGAVIGTFN----GYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSN 522 (712)
T ss_pred hhh--hhheeEEeccCCceEEEEEec----cEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecC
Confidence 111 001123588998877765442 223334433322 01111110 01236888988864 45776654
Q ss_pred cCCeeEEEEEeCCCCceeeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+ ++|+++|+.+-+.+..+... ..+-...+++.||+.|+... .-..+|.|+...
T Consensus 523 D---SrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~s----eDs~VYiW~~~~ 577 (712)
T KOG0283|consen 523 D---SRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSAS----EDSWVYIWKNDS 577 (712)
T ss_pred C---CceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEee----cCceEEEEeCCC
Confidence 4 58999997544444444422 11212445667998776443 345788888754
No 231
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.15 E-value=0.0001 Score=77.61 Aligned_cols=101 Identities=19% Similarity=0.233 Sum_probs=65.5
Q ss_pred CCccEEEE----EcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHH-
Q 004766 479 GSHPCLLY----GYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLI- 553 (732)
Q Consensus 479 ~~~P~vv~----~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~- 553 (732)
.+.|.||. +|| +|+..... ..+....|. .|.-|..+-+.--.+ ...+++|+..+....+
T Consensus 67 ~krP~vViDPRAGHG-pGIGGFK~-dSevG~AL~-~GHPvYFV~F~p~P~-------------pgQTl~DV~~ae~~Fv~ 130 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHG-PGIGGFKP-DSEVGVALR-AGHPVYFVGFFPEPE-------------PGQTLEDVMRAEAAFVE 130 (581)
T ss_pred CCCCeEEeCCCCCCC-CCccCCCc-ccHHHHHHH-cCCCeEEEEecCCCC-------------CCCcHHHHHHHHHHHHH
Confidence 45677776 566 33321111 345556677 798777776653222 2346788776644332
Q ss_pred ---HcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEE-EcCCcc
Q 004766 554 ---SAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCAL-AHVGVM 596 (732)
Q Consensus 554 ---~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v-~~~p~~ 596 (732)
+..- +..|..++|.+.||.+++.+++.+|+++.-+| .++|+.
T Consensus 131 ~V~~~hp-~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPls 176 (581)
T PF11339_consen 131 EVAERHP-DAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLS 176 (581)
T ss_pred HHHHhCC-CCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCcc
Confidence 3322 23499999999999999999999999998775 566654
No 232
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.15 E-value=6.8e-05 Score=73.20 Aligned_cols=236 Identities=13% Similarity=-0.001 Sum_probs=133.8
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHh
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHK 531 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 531 (732)
..+.+.+.+| ..+...-+|-.....+.+..+||-+||+||+..+-.|. ...|++.|+.++.+|++|.|-.....+
T Consensus 7 ~~~k~~~~~~-~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi---~~~l~~~~iR~I~iN~PGf~~t~~~~~- 81 (297)
T PF06342_consen 7 KLVKFQAENG-KIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYI---RPPLDEAGIRFIGINYPGFGFTPGYPD- 81 (297)
T ss_pred EEEEcccccC-ceEEEEEEEEecCCCCCCceeEEEecCCCCCccchhhh---hhHHHHcCeEEEEeCCCCCCCCCCCcc-
Confidence 3455666777 67777766766554455667999999999997665553 456777999999999999874322111
Q ss_pred cccccCCccHHHHHHHHHHHHHHc-CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc-cc-----------
Q 004766 532 GGALAKKQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM-DM----------- 598 (732)
Q Consensus 532 ~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~-d~----------- 598 (732)
. ..+-.+-..-++.|.++ +. + +++.++|||.|+-.++.++..+|- .++++..|.- -+
T Consensus 82 -----~-~~~n~er~~~~~~ll~~l~i-~-~~~i~~gHSrGcenal~la~~~~~--~g~~lin~~G~r~HkgIrp~~r~~ 151 (297)
T PF06342_consen 82 -----Q-QYTNEERQNFVNALLDELGI-K-GKLIFLGHSRGCENALQLAVTHPL--HGLVLINPPGLRPHKGIRPLSRME 151 (297)
T ss_pred -----c-ccChHHHHHHHHHHHHHcCC-C-CceEEEEeccchHHHHHHHhcCcc--ceEEEecCCccccccCcCHHHHHH
Confidence 1 11223333334444444 43 3 799999999999999999998873 3444443321 00
Q ss_pred -ccc----ccCCCCC----ccccccCCC--CCHHHHHHHHhcCcc------cCCCCCCCCCCCCCCCCCeEEEEeeCCCC
Q 004766 599 -LRY----HKFTIGH----AWVSDFGCS--EEEEEFYWLIKYSPL------HNVRRPWEQNPDKPFQYPSTLLLTADHDD 661 (732)
Q Consensus 599 -~~~----~~~~~~~----~~~~~~g~p--~~~~~~~~~~~~sp~------~~~~~~~~~~~~~~~~~~p~Li~~g~~D~ 661 (732)
+.+ .....+. ..+.-+|-- .-.+....++...-. .+++... ....|+|+..|.+|.
T Consensus 152 ~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln-------~~~ikvli~ygg~Dh 224 (297)
T PF06342_consen 152 TINYLYDLLPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLN-------KKPIKVLIAYGGKDH 224 (297)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhc-------cCCCcEEEEEcCcch
Confidence 000 0000000 000112321 122333334432211 1122111 134799999999999
Q ss_pred CCCchHHHHHHHHHHHhhcCCC-----C--------CCCCCCCEEEEEeCCCCCCCCCchH
Q 004766 662 RVVPLHSLKLLATMQYVLCTSL-----E--------NSPQTNPIIGRIERKAGHGVGLPTQ 709 (732)
Q Consensus 662 ~v~~~~~~~~~~~l~~~~~~~~-----~--------~~~~~~~~~~~~~~~~gH~~~~~~~ 709 (732)
.|--+.+..++.+.+....-.. + .-+++..-.-.++...||...+.+.
T Consensus 225 LIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A 285 (297)
T PF06342_consen 225 LIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRA 285 (297)
T ss_pred hhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHH
Confidence 9987778777776654311100 0 0122444555677888998766443
No 233
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=98.14 E-value=0.00039 Score=75.38 Aligned_cols=221 Identities=14% Similarity=0.151 Sum_probs=132.0
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
...|-|-+++|.... ....|-|+|+.+...+.... ......+++-+||++.++..+.+.
T Consensus 417 ~~~Fvpgd~~Iv~G~-----k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDk--------------- 476 (888)
T KOG0306|consen 417 ASKFVPGDRYIVLGT-----KNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADK--------------- 476 (888)
T ss_pred EEEecCCCceEEEec-----cCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCc---------------
Confidence 455788888877553 23478999999887553222 122357888899999998876443
Q ss_pred CcccEEEEEECC--C--CCCCCe-------EEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCc
Q 004766 215 NLYHEFYYHFLG--T--KQSEDI-------LCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGL 283 (732)
Q Consensus 215 ~~~~~v~~~~lg--t--~~~~~~-------~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 283 (732)
.|..|+.. . +..+.. ...+.++ -+..+.+||||++|++..-+. +-.+|.+|.=.-
T Consensus 477 ----tVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~d---dvL~v~~Spdgk~LaVsLLdn---TVkVyflDtlKF---- 542 (888)
T KOG0306|consen 477 ----TVKFWDFKLVVSVPGTQKKVLSLKHTRTLELED---DVLCVSVSPDGKLLAVSLLDN---TVKVYFLDTLKF---- 542 (888)
T ss_pred ----EEEEEeEEEEeccCcccceeeeeccceEEeccc---cEEEEEEcCCCcEEEEEeccC---eEEEEEecceee----
Confidence 23333221 0 111111 1222232 246789999999999887544 356777763210
Q ss_pred ccccccCCCCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCE
Q 004766 284 EGFKKRDGLLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ 362 (732)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 362 (732)
...|-...-+... -+|||++.++ ....+ .+.++|-.|. |.+-+.+++|+ ..+-.+.+.|..+
T Consensus 543 -----------flsLYGHkLPV~smDIS~DSkliv-TgSAD-KnVKiWGLdF--GDCHKS~fAHd--DSvm~V~F~P~~~ 605 (888)
T KOG0306|consen 543 -----------FLSLYGHKLPVLSMDISPDSKLIV-TGSAD-KNVKIWGLDF--GDCHKSFFAHD--DSVMSVQFLPKTH 605 (888)
T ss_pred -----------eeeecccccceeEEeccCCcCeEE-eccCC-CceEEecccc--chhhhhhhccc--CceeEEEEcccce
Confidence 1112111111111 3788877554 33322 3556666554 44457788887 5566788888788
Q ss_pred EEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEE
Q 004766 363 MIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVF 409 (732)
Q Consensus 363 l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~ 409 (732)
++|+...++ .+..||-+.=+.++.+..+...+..++.+|+|+.++
T Consensus 606 ~FFt~gKD~--kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vv 650 (888)
T KOG0306|consen 606 LFFTCGKDG--KVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVV 650 (888)
T ss_pred eEEEecCcc--eEEeechhhhhhheeeccchheeeeeEEcCCCCeEE
Confidence 999999884 788898542233345554556677778888887443
No 234
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=98.14 E-value=0.00096 Score=67.94 Aligned_cols=238 Identities=15% Similarity=0.180 Sum_probs=140.1
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccce-eeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWF-KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
+..+..+|....++ .|.+..++.++|..+++.+..-.+.. ....+.++||.+.++..+.
T Consensus 222 i~ald~~~s~~~il-----TGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSa--------------- 281 (506)
T KOG0289|consen 222 ITALDIIPSSSKIL-----TGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASA--------------- 281 (506)
T ss_pred eeEEeecCCCCcce-----ecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCC---------------
Confidence 33445555533343 33444578889988888665333322 3467788888876665432
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
...|++|..+...... +....+ .-+..+...|.|.|++..++++. +...|..++.
T Consensus 282 ----d~~i~vws~~~~s~~~--~~~~h~--~~V~~ls~h~tgeYllsAs~d~~-----w~Fsd~~~g~------------ 336 (506)
T KOG0289|consen 282 ----DEIIRVWSVPLSSEPT--SSRPHE--EPVTGLSLHPTGEYLLSASNDGT-----WAFSDISSGS------------ 336 (506)
T ss_pred ----cceEEeeccccccCcc--cccccc--ccceeeeeccCCcEEEEecCCce-----EEEEEccCCc------------
Confidence 2357777777654322 211111 22456778899999987665443 3334555431
Q ss_pred CCcEEeee-cccceEE--EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEec
Q 004766 293 LPFVKLID-GFDAQYE--VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLS 369 (732)
Q Consensus 293 ~~~~~l~~-~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~ 369 (732)
....... ..+..+. .|.||| ++|.+. .++..|-.+|++.+.+... +|.. ...+..+.++.+++.+++..+
T Consensus 337 -~lt~vs~~~s~v~~ts~~fHpDg--Lifgtg--t~d~~vkiwdlks~~~~a~-Fpgh-t~~vk~i~FsENGY~Lat~ad 409 (506)
T KOG0289|consen 337 -QLTVVSDETSDVEYTSAAFHPDG--LIFGTG--TPDGVVKIWDLKSQTNVAK-FPGH-TGPVKAISFSENGYWLATAAD 409 (506)
T ss_pred -EEEEEeeccccceeEEeeEcCCc--eEEecc--CCCceEEEEEcCCcccccc-CCCC-CCceeEEEeccCceEEEEEec
Confidence 1222222 1223333 478887 444443 3466788899988763333 3432 467899999987887777777
Q ss_pred CCeeEEEEEeCCCCceeeeccccc-ceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 370 DVKYVLQIRDLKNGSLLHQLPIEI-GSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~~~~~l~~~~-g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
++ .+.+||+..-+..+.++++. ..+..++++..|..+.+..+ --++|.++-.+.
T Consensus 410 d~--~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~----~l~Vy~~~k~~k 464 (506)
T KOG0289|consen 410 DG--SVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGS----DLQVYICKKKTK 464 (506)
T ss_pred CC--eEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecc----eeEEEEEecccc
Confidence 75 38999997555556676663 34557777777776665422 235777765444
No 235
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.12 E-value=2.4e-05 Score=80.92 Aligned_cols=241 Identities=14% Similarity=0.085 Sum_probs=127.0
Q ss_pred EEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccc
Q 004766 456 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 535 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~ 535 (732)
+....+ ..+.+.+..|++....++.|+++..||.......... ....++..++.++..+....++.+-..+...
T Consensus 25 ~~~~~~-~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~-- 98 (299)
T COG1073 25 LANRTG-IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSLG---YAVLLAEKGYRVLAGDASLFGESGGDPRGLA-- 98 (299)
T ss_pred cccccC-ceeeeEEEecCCCCccccCceEEeccCccccccCcch---HHHHhhhceeEEeeecccccccccccccccc--
Confidence 333344 5678888888875444689999999997665433222 3445665888877776411111110000000
Q ss_pred cCCccHHHHHHHHHHHHHH---------cCCCCCCcEEEEecChhHHHHHHHHhhCC---CeeeEEEEcCCccccccccc
Q 004766 536 AKKQNCFDDFISASEYLIS---------AGYTQSRKLCIEGGSNGGLLVGACINQRP---DLFGCALAHVGVMDMLRYHK 603 (732)
Q Consensus 536 ~~~~~~~~D~~~~~~~l~~---------~~~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~p~~d~~~~~~ 603 (732)
.......++......... ......++..+.|.+.||..+...+...+ +..+.++...++-.......
T Consensus 99 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~ 177 (299)
T COG1073 99 -DSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLL 177 (299)
T ss_pred -CccccccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccc
Confidence 000001111111110000 00112357788888888887777777655 22222222221111100000
Q ss_pred C--------CCCCccc-----ccc-CCC-----CCHHHHHHHHhcCcccCCCCCCCCCCCCCCCC-CeEEEEeeCCCCCC
Q 004766 604 F--------TIGHAWV-----SDF-GCS-----EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQY-PSTLLLTADHDDRV 663 (732)
Q Consensus 604 ~--------~~~~~~~-----~~~-g~p-----~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~-~p~Li~~g~~D~~v 663 (732)
. ....... ... ..+ .... ...+...+++..+.. +. .|+|++||.+|..|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~----------i~~~P~l~~~G~~D~~v 246 (299)
T COG1073 178 LGANPELARELIDYLITPGGFAPLPAPEAPLDTLPLR-AVLLLLLDPFDDAEK----------ISPRPVLLVHGERDEVV 246 (299)
T ss_pred cccchHHHHhhhhhhccCCCCCCCCcccccccccccc-hhhhccCcchhhHhh----------cCCcceEEEecCCCccc
Confidence 0 0000000 000 000 0011 122455566666665 44 59999999999999
Q ss_pred CchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCC-chHHHHHHHHHHHHHHHHHh
Q 004766 664 VPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGL-PTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 664 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~~fl~~~l 726 (732)
|..++.+++.+.+. .+..+.++++++|.... ......+.+.++..||.++|
T Consensus 247 p~~~~~~~~~~~~~------------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 247 PLRDAEDLYEAARE------------RPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred chhhhHHHHhhhcc------------CCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 99999999988774 26788888999999774 22222467778889998876
No 236
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=98.12 E-value=0.00037 Score=74.39 Aligned_cols=237 Identities=10% Similarity=0.045 Sum_probs=144.9
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
+.+.-+.|| ..+.||.++. ..+|+|+..+|..+... .....+.++.|+++|+.|+....++
T Consensus 178 fY~nlldWs-s~n~laValg------~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g----------- 239 (484)
T KOG0305|consen 178 FYLNLLDWS-SANVLAVALG------QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDG----------- 239 (484)
T ss_pred HhhhHhhcc-cCCeEEEEec------ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCC-----------
Confidence 445567799 4557887752 47999999999854422 2122358999999999999986443
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
.|.+|++.+...... + .+ .+...+..++|. + .++..... + ..|...|+......
T Consensus 240 --------~v~iwD~~~~k~~~~-~-~~-~h~~rvg~laW~--~-~~lssGsr-~---~~I~~~dvR~~~~~-------- 293 (484)
T KOG0305|consen 240 --------TVQIWDVKEQKKTRT-L-RG-SHASRVGSLAWN--S-SVLSSGSR-D---GKILNHDVRISQHV-------- 293 (484)
T ss_pred --------eEEEEehhhcccccc-c-cC-CcCceeEEEecc--C-ceEEEecC-C---CcEEEEEEecchhh--------
Confidence 578888765432211 1 11 123455677887 2 22233222 1 23555555442110
Q ss_pred CCCCcEEeeecccceEE--EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCEEEEEE
Q 004766 291 GLLPFVKLIDGFDAQYE--VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQMIVSY 367 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~l~~~~ 367 (732)
.. ...+...++. .|++|+..++- ++....+..+|.........+..+. ..+..+.|.+ ...|+++.
T Consensus 294 ----~~-~~~~H~qeVCgLkws~d~~~lAS----GgnDN~~~Iwd~~~~~p~~~~~~H~--aAVKA~awcP~q~~lLAsG 362 (484)
T KOG0305|consen 294 ----VS-TLQGHRQEVCGLKWSPDGNQLAS----GGNDNVVFIWDGLSPEPKFTFTEHT--AAVKALAWCPWQSGLLATG 362 (484)
T ss_pred ----hh-hhhcccceeeeeEECCCCCeecc----CCCccceEeccCCCccccEEEeccc--eeeeEeeeCCCccCceEEc
Confidence 11 1111112222 48999887763 2335578888885555445666665 5677888887 25577776
Q ss_pred ecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEE
Q 004766 368 LSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQC 424 (732)
Q Consensus 368 ~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~ 424 (732)
.......|..|+..+|+.+..+. ....|..+.+++..+++..+......--+||.|
T Consensus 363 GGs~D~~i~fwn~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ 418 (484)
T KOG0305|consen 363 GGSADRCIKFWNTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKY 418 (484)
T ss_pred CCCcccEEEEEEcCCCcEecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEec
Confidence 65556799999998888765554 245678889999998887665544333344544
No 237
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.09 E-value=0.00014 Score=73.03 Aligned_cols=103 Identities=17% Similarity=0.049 Sum_probs=65.0
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
.|.++++||.++.................+ |.++.+|.||.|... . . ..........+..+.+.- ..
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~----~---~---~~~~~~~~~~~~~~~~~~--~~ 87 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSD----P---A---GYSLSAYADDLAALLDAL--GL 87 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccc-eEEEEecccCCCCCC----c---c---cccHHHHHHHHHHHHHHh--CC
Confidence 559999999987644333211111111113 999999999877654 0 0 111122233333333321 12
Q ss_pred CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 561 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
.++.+.|+|+||.++..++.++|+.++++|...+..
T Consensus 88 ~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 88 EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred CceEEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 349999999999999999999999999998877543
No 238
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=98.08 E-value=0.0021 Score=62.93 Aligned_cols=241 Identities=12% Similarity=0.100 Sum_probs=126.7
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc---eecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI---VEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~---~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
...+||+-|.+||..... ..+.|||+.|-. .+...... ..+++||+||+.|+-++
T Consensus 27 ~~~~Fs~~G~~lAvGc~n-----G~vvI~D~~T~~iar~lsaH~~p--i~sl~WS~dgr~LltsS--------------- 84 (405)
T KOG1273|consen 27 ECCQFSRWGDYLAVGCAN-----GRVVIYDFDTFRIARMLSAHVRP--ITSLCWSRDGRKLLTSS--------------- 84 (405)
T ss_pred ceEEeccCcceeeeeccC-----CcEEEEEccccchhhhhhccccc--eeEEEecCCCCEeeeec---------------
Confidence 368899999999988642 368889998755 23222222 48899999999888764
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
+...+.+|++-.+..-..+.|.. + +.+..|.|-.+..++..--.. .-++++...+.
T Consensus 85 ----~D~si~lwDl~~gs~l~rirf~s---p--v~~~q~hp~k~n~~va~~~~~----sp~vi~~s~~~----------- 140 (405)
T KOG1273|consen 85 ----RDWSIKLWDLLKGSPLKRIRFDS---P--VWGAQWHPRKRNKCVATIMEE----SPVVIDFSDPK----------- 140 (405)
T ss_pred ----CCceeEEEeccCCCceeEEEccC---c--cceeeeccccCCeEEEEEecC----CcEEEEecCCc-----------
Confidence 34468888886654333333422 2 235666664443333221111 13445554321
Q ss_pred CCCcEEeeecccc------eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCC--ceEeccCCCCCceeEEEEecCCEE
Q 004766 292 LLPFVKLIDGFDA------QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND--WFEVIPEAERDVLESATAVNLNQM 363 (732)
Q Consensus 292 ~~~~~~l~~~~~~------~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~--~~~l~~~~~~~~l~~~~~~~~~~l 363 (732)
-..|..+.+. +..++.+.|++++.-+ ..++|..++..+.+. +-.++. -..|..+.++..+..
T Consensus 141 ---h~~Lp~d~d~dln~sas~~~fdr~g~yIitGt----sKGkllv~~a~t~e~vas~rits---~~~IK~I~~s~~g~~ 210 (405)
T KOG1273|consen 141 ---HSVLPKDDDGDLNSSASHGVFDRRGKYIITGT----SKGKLLVYDAETLECVASFRITS---VQAIKQIIVSRKGRF 210 (405)
T ss_pred ---eeeccCCCccccccccccccccCCCCEEEEec----CcceEEEEecchheeeeeeeech---heeeeEEEEeccCcE
Confidence 0111111111 1123667788777533 245788888777541 112222 134666666643443
Q ss_pred EEEEecCCeeEEEEEeCC---C-Cceeeecccc---cc-----eeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCC
Q 004766 364 IVSYLSDVKYVLQIRDLK---N-GSLLHQLPIE---IG-----SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETP 431 (732)
Q Consensus 364 ~~~~~~~g~~~l~~~d~~---~-g~~~~~l~~~---~g-----~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~ 431 (732)
++.-..| ..|+.++.. + |+. ..++.. .. ......+|.+|.++. .+| .....+|.+....|.+
T Consensus 211 liiNtsD--RvIR~ye~~di~~~~r~-~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~--a~s-~~aHaLYIWE~~~GsL 284 (405)
T KOG1273|consen 211 LIINTSD--RVIRTYEISDIDDEGRD-GEVEPEHKLQDVVNKLQWKKCCFSGDGEYVC--AGS-ARAHALYIWEKSIGSL 284 (405)
T ss_pred EEEecCC--ceEEEEehhhhcccCcc-CCcChhHHHHHHHhhhhhhheeecCCccEEE--ecc-ccceeEEEEecCCcce
Confidence 3333333 245666543 1 111 111110 11 112233455665433 333 6678999999888862
Q ss_pred ceEEEEe
Q 004766 432 EMKIFRE 438 (732)
Q Consensus 432 ~~~~l~~ 438 (732)
.++|..
T Consensus 285 -VKILhG 290 (405)
T KOG1273|consen 285 -VKILHG 290 (405)
T ss_pred -eeeecC
Confidence 455543
No 239
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.08 E-value=0.0037 Score=74.16 Aligned_cols=221 Identities=13% Similarity=0.077 Sum_probs=120.6
Q ss_pred EEeEEECCC-CcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEe-CCcEEEEEEecCCCCCCCCCCCC
Q 004766 134 LIKVSVSED-AKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTH-DSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 134 ~~~~~~SPD-G~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
+..+.|+|. +++||-+ + ...+|++||+.+++.+.... .......++|+| |+..|+....
T Consensus 535 v~~l~~~~~~~~~las~-~----~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~------------- 596 (793)
T PLN00181 535 LSGICWNSYIKSQVASS-N----FEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSD------------- 596 (793)
T ss_pred eeeEEeccCCCCEEEEE-e----CCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcC-------------
Confidence 556788775 5666533 2 23589999999887553221 122347899997 6776665532
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEE-ecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHV-TEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~-SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
...|.+|++.++.. +..+... .....+.| +++|.+|+..+.+ ..|+++|+....
T Consensus 597 ------Dg~v~iWd~~~~~~--~~~~~~~---~~v~~v~~~~~~g~~latgs~d-----g~I~iwD~~~~~--------- 651 (793)
T PLN00181 597 ------DGSVKLWSINQGVS--IGTIKTK---ANICCVQFPSESGRSLAFGSAD-----HKVYYYDLRNPK--------- 651 (793)
T ss_pred ------CCEEEEEECCCCcE--EEEEecC---CCeEEEEEeCCCCCEEEEEeCC-----CeEEEEECCCCC---------
Confidence 23688999876532 1222221 12446677 4578888766543 358889987531
Q ss_pred CCCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCC------CCceEeccCCCCCceeEEEEecCCE
Q 004766 290 DGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEP------NDWFEVIPEAERDVLESATAVNLNQ 362 (732)
Q Consensus 290 ~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~------~~~~~l~~~~~~~~l~~~~~~~~~~ 362 (732)
.+...+........ ..|. ++..|+..+. ...|..+|+..+ .....+..+. ..+..+.+++++.
T Consensus 652 ---~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~----D~~ikiWd~~~~~~~~~~~~l~~~~gh~--~~i~~v~~s~~~~ 721 (793)
T PLN00181 652 ---LPLCTMIGHSKTVSYVRFV-DSSTLVSSST----DNTLKLWDLSMSISGINETPLHSFMGHT--NVKNFVGLSVSDG 721 (793)
T ss_pred ---ccceEecCCCCCEEEEEEe-CCCEEEEEEC----CCEEEEEeCCCCccccCCcceEEEcCCC--CCeeEEEEcCCCC
Confidence 11222222111111 2354 5666554333 235667776532 1223343333 3455677776566
Q ss_pred EEEEEecCCeeEEEEEeCCCCceeeecc-----------c--ccceeeEeecccCCcEEE
Q 004766 363 MIVSYLSDVKYVLQIRDLKNGSLLHQLP-----------I--EIGSVNAISARREDSVVF 409 (732)
Q Consensus 363 l~~~~~~~g~~~l~~~d~~~g~~~~~l~-----------~--~~g~v~~~~~s~d~~~l~ 409 (732)
++++...++ .|++|+...+....... . ....|..+.+++++..++
T Consensus 722 ~lasgs~D~--~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lv 779 (793)
T PLN00181 722 YIATGSETN--EVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLV 779 (793)
T ss_pred EEEEEeCCC--EEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEE
Confidence 777777774 67788865432211110 0 123466677777776544
No 240
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=98.08 E-value=0.0012 Score=68.35 Aligned_cols=229 Identities=15% Similarity=0.171 Sum_probs=138.0
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
+.+..|=.||+++| .|++...+.|+|..+...+.. ...........|+|++.+++....|.
T Consensus 71 v~s~~fR~DG~Lla-----aGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd------------- 132 (487)
T KOG0310|consen 71 VYSVDFRSDGRLLA-----AGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDD------------- 132 (487)
T ss_pred eeEEEeecCCeEEE-----ccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCC-------------
Confidence 56788999999988 446667899999766433321 11111235677899988888775443
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
..+.+|++.+.. ..++...+..++...+|+|-..+|+++.+-. ..|.++|+....
T Consensus 133 -----~v~k~~d~s~a~----v~~~l~~htDYVR~g~~~~~~~hivvtGsYD----g~vrl~DtR~~~------------ 187 (487)
T KOG0310|consen 133 -----KVVKYWDLSTAY----VQAELSGHTDYVRCGDISPANDHIVVTGSYD----GKVRLWDTRSLT------------ 187 (487)
T ss_pred -----ceEEEEEcCCcE----EEEEecCCcceeEeeccccCCCeEEEecCCC----ceEEEEEeccCC------------
Confidence 346778887653 2444555556888899999999988876432 346667765521
Q ss_pred CCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC-CCCceeEEEEecCCEEEEEEecCC
Q 004766 293 LPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-ERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 293 ~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
.....+-.+...+...+-|.|..++- .++ ..+-.+|+.++. +.+..-. ....+..+.+..++.-+++..-|+
T Consensus 188 ~~v~elnhg~pVe~vl~lpsgs~ias---AgG--n~vkVWDl~~G~--qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~ 260 (487)
T KOG0310|consen 188 SRVVELNHGCPVESVLALPSGSLIAS---AGG--NSVKVWDLTTGG--QLLTSMFNHNKTVTCLRLASDSTRLLSGSLDR 260 (487)
T ss_pred ceeEEecCCCceeeEEEcCCCCEEEE---cCC--CeEEEEEecCCc--eehhhhhcccceEEEEEeecCCceEeeccccc
Confidence 11222222222222235566666553 123 346678888665 2222211 224577777776556566666664
Q ss_pred eeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecC
Q 004766 372 KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSF 415 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~ 415 (732)
++.++|..+=+.+.....| +.|-+++.++|+..+++..++-
T Consensus 261 --~VKVfd~t~~Kvv~s~~~~-~pvLsiavs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 261 --HVKVFDTTNYKVVHSWKYP-GPVLSIAVSPDDQTVVIGMSNG 301 (487)
T ss_pred --ceEEEEccceEEEEeeecc-cceeeEEecCCCceEEEecccc
Confidence 6777776444444444444 4556788899988888776653
No 241
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.08 E-value=0.0083 Score=61.00 Aligned_cols=248 Identities=13% Similarity=0.120 Sum_probs=128.7
Q ss_pred EeEEECCCCcEEEEEEe-----ccCCceEEEEEEECCCCcee-----ccc---ccceeeeeEEEEeCCcEEEEEEecCCC
Q 004766 135 IKVSVSEDAKYLAYALS-----YSGSDWATIKLMRIEDQIVE-----ADA---LSWFKFSSIAWTHDSKGFFYSRYPAPK 201 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~-----~~G~e~~~i~v~dl~~g~~~-----~~~---~~~~~~~~~~WspDg~~l~y~~~~~~~ 201 (732)
+.+.+||||+.+..... ..|...--|-+||.+|=.+. +.. ........++.|+|||++++.-.-.
T Consensus 39 ~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TP-- 116 (342)
T PF06433_consen 39 GNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTP-- 116 (342)
T ss_dssp EEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESS--
T ss_pred CceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCC--
Confidence 46889999999886532 22444446889999875432 211 0011125678999999888764321
Q ss_pred CCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCC
Q 004766 202 EGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPE 281 (732)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 281 (732)
...|-+.|+.... .+-+ -+.+++. .+.-++..++..++. ++. -....+|.++.+
T Consensus 117 ---------------a~SVtVVDl~~~k----vv~e-i~~PGC~-~iyP~~~~~F~~lC~-DGs---l~~v~Ld~~Gk~- 170 (342)
T PF06433_consen 117 ---------------ATSVTVVDLAAKK----VVGE-IDTPGCW-LIYPSGNRGFSMLCG-DGS---LLTVTLDADGKE- 170 (342)
T ss_dssp ---------------SEEEEEEETTTTE----EEEE-EEGTSEE-EEEEEETTEEEEEET-TSC---EEEEEETSTSSE-
T ss_pred ---------------CCeEEEEECCCCc----eeee-ecCCCEE-EEEecCCCceEEEec-CCc---eEEEEECCCCCE-
Confidence 1246677776432 2322 2234443 223333334433332 221 111222322211
Q ss_pred CcccccccCCCCCcEEeeecccc--e----EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-----CceEeccCC--C
Q 004766 282 GLEGFKKRDGLLPFVKLIDGFDA--Q----YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-----DWFEVIPEA--E 348 (732)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~--~----~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-----~~~~l~~~~--~ 348 (732)
.+..+.-++. + ...++.++.+++|.+-. ++|+.+|+.+.. .|..+...+ +
T Consensus 171 -------------~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~----G~v~~~dlsg~~~~~~~~~~~~t~~e~~~ 233 (342)
T PF06433_consen 171 -------------AQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYE----GNVYSADLSGDSAKFGKPWSLLTDAEKAD 233 (342)
T ss_dssp -------------EEEEEEESSTTTS-B-S--EEETTTTEEEEEBTT----SEEEEEEETTSSEEEEEEEESS-HHHHHT
T ss_pred -------------eEeeccccCCCCcccccccceECCCCeEEEEecC----CEEEEEeccCCcccccCcccccCcccccc
Confidence 1111111111 1 12355567789987764 479999987764 122111110 0
Q ss_pred CCc---eeEEEEec-CCEEEEEEecC-------CeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCC
Q 004766 349 RDV---LESATAVN-LNQMIVSYLSD-------VKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLI 417 (732)
Q Consensus 349 ~~~---l~~~~~~~-~~~l~~~~~~~-------g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~ 417 (732)
+.. .+.+++.+ .++||+.-..+ +-.+||++|+++++.+.+|+++. .+.+++.+.|.+=++|..+. .
T Consensus 234 ~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~-~~~Si~Vsqd~~P~L~~~~~--~ 310 (342)
T PF06433_consen 234 GWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEH-PIDSIAVSQDDKPLLYALSA--G 310 (342)
T ss_dssp TEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEE-EESEEEEESSSS-EEEEEET--T
T ss_pred CcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCC-ccceEEEccCCCcEEEEEcC--C
Confidence 111 12245543 36787765432 33699999999999888998752 34456666676656655544 2
Q ss_pred CceEEEEECCCCC
Q 004766 418 PGIVYQCNLKTET 430 (732)
Q Consensus 418 p~~~y~~d~~~~~ 430 (732)
-..++.+|..+|+
T Consensus 311 ~~~l~v~D~~tGk 323 (342)
T PF06433_consen 311 DGTLDVYDAATGK 323 (342)
T ss_dssp TTEEEEEETTT--
T ss_pred CCeEEEEeCcCCc
Confidence 3689999999986
No 242
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.02 E-value=0.00041 Score=65.86 Aligned_cols=213 Identities=15% Similarity=0.165 Sum_probs=111.3
Q ss_pred EccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccccc
Q 004766 457 PSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALA 536 (732)
Q Consensus 457 ~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~ 536 (732)
.-.+| .+|..|-..|+.. ...++|+||..-| |+.++ ..|. ..+.+|+.+||.|+-+|.--+=|. .+ +.
T Consensus 8 ~~~~~-~~I~vwet~P~~~-~~~~~~tiliA~G-f~rrm-dh~a-gLA~YL~~NGFhViRyDsl~HvGl-----Ss--G~ 75 (294)
T PF02273_consen 8 RLEDG-RQIRVWETRPKNN-EPKRNNTILIAPG-FARRM-DHFA-GLAEYLSANGFHVIRYDSLNHVGL-----SS--GD 75 (294)
T ss_dssp EETTT-EEEEEEEE---TT-S---S-EEEEE-T-T-GGG-GGGH-HHHHHHHTTT--EEEE---B---------------
T ss_pred EcCCC-CEEEEeccCCCCC-CcccCCeEEEecc-hhHHH-HHHH-HHHHHHhhCCeEEEeccccccccC-----CC--CC
Confidence 34588 9999999999875 3467889998877 44432 2343 456667779999999886422110 01 11
Q ss_pred CCc----cHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCC----
Q 004766 537 KKQ----NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGH---- 608 (732)
Q Consensus 537 ~~~----~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~---- 608 (732)
..+ -..+|+..+++||...|. .++|++--|.-|-++...++. ++ ..-+|..+|++|+..+..-..+.
T Consensus 76 I~eftms~g~~sL~~V~dwl~~~g~---~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVGVVnlr~TLe~al~~Dyl~ 150 (294)
T PF02273_consen 76 INEFTMSIGKASLLTVIDWLATRGI---RRIGLIAASLSARIAYEVAAD-IN-LSFLITAVGVVNLRDTLEKALGYDYLQ 150 (294)
T ss_dssp -----HHHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-HHHHHHHHHSS-GGG
T ss_pred hhhcchHHhHHHHHHHHHHHHhcCC---CcchhhhhhhhHHHHHHHhhc-cC-cceEEEEeeeeeHHHHHHHHhccchhh
Confidence 111 124788999999998875 579999999999999999985 54 67778888999987553211111
Q ss_pred cccccc-------CCCCCHHHH--HHHH-hcCc----ccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHH
Q 004766 609 AWVSDF-------GCSEEEEEF--YWLI-KYSP----LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLAT 674 (732)
Q Consensus 609 ~~~~~~-------g~p~~~~~~--~~~~-~~sp----~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~ 674 (732)
.+..+. |-.-+.+.| ++++ .+.+ ...++. ...|++..++.+|.-|...+..++...
T Consensus 151 ~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~----------l~iP~iaF~A~~D~WV~q~eV~~~~~~ 220 (294)
T PF02273_consen 151 LPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKR----------LSIPFIAFTANDDDWVKQSEVEELLDN 220 (294)
T ss_dssp S-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT------------S-EEEEEETT-TTS-HHHHHHHHTT
T ss_pred cchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhh----------CCCCEEEEEeCCCccccHHHHHHHHHh
Confidence 111111 111111221 1111 1122 233444 578999999999999988877666655
Q ss_pred HHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCch
Q 004766 675 MQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT 708 (732)
Q Consensus 675 l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 708 (732)
+. .....+...+|+.|-.+...
T Consensus 221 ~~------------s~~~klysl~Gs~HdL~enl 242 (294)
T PF02273_consen 221 IN------------SNKCKLYSLPGSSHDLGENL 242 (294)
T ss_dssp -T------------T--EEEEEETT-SS-TTSSH
T ss_pred cC------------CCceeEEEecCccchhhhCh
Confidence 43 33467888899999987543
No 243
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.02 E-value=2.9e-05 Score=76.55 Aligned_cols=135 Identities=16% Similarity=0.141 Sum_probs=93.2
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHh
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHK 531 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 531 (732)
.+.++.+.|| -+|-..++...........-+||..-|.-|.-..... ..-++ .||.|+-.|.+|-+|.-
T Consensus 215 ~R~kiks~dg-neiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEvG~m----~tP~~-lgYsvLGwNhPGFagST----- 283 (517)
T KOG1553|consen 215 QRLKIKSSDG-NEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEVGVM----NTPAQ-LGYSVLGWNHPGFAGST----- 283 (517)
T ss_pred eEEEEeecCC-cchhheeecCCCCCCCCCceEEEEecCCccceEeeee----cChHH-hCceeeccCCCCccccC-----
Confidence 5677888899 8998877765543322334466666664332111111 12244 89999999999965531
Q ss_pred cccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccc
Q 004766 532 GGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR 600 (732)
Q Consensus 532 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~ 600 (732)
.....+|+..-+.+++.+.+..=-..++.|.++|+|-||+.+++++..+|| .+|+|+.+-|-|++-
T Consensus 284 --G~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDllp 349 (517)
T KOG1553|consen 284 --GLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDLLP 349 (517)
T ss_pred --CCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhhhh
Confidence 122345566666777888776633467889999999999999999999997 699999999888753
No 244
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=98.01 E-value=0.0028 Score=60.84 Aligned_cols=191 Identities=18% Similarity=0.136 Sum_probs=104.2
Q ss_pred CCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce-ecccccc--eeeeeEEEEeCCcEEEEEEecCCCCCCC
Q 004766 129 DGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV-EADALSW--FKFSSIAWTHDSKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 129 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~-~~~~~~~--~~~~~~~WspDg~~l~y~~~~~~~~~~~ 205 (732)
.++.++..++|||.|++||-.+ -..+.-||.-..++. ...++++ ...-.++||++|..|+..+.
T Consensus 59 ~hkrsVRsvAwsp~g~~La~aS-----FD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSR-------- 125 (312)
T KOG0645|consen 59 GHKRSVRSVAWSPHGRYLASAS-----FDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSR-------- 125 (312)
T ss_pred cchheeeeeeecCCCcEEEEee-----ccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeC--------
Confidence 4567899999999999998664 334666666555552 1122221 12468999999999998754
Q ss_pred CCCCCcccCCcccEEEEEECCCCCCCC-eEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQSED-ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~~~-~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
...||.|.+..+..-+ .-|.++ +..-+-.+.|.|.-..|+-.+.+++ -++|.-+. +..
T Consensus 126 -----------DKSVWiWe~deddEfec~aVL~~--HtqDVK~V~WHPt~dlL~S~SYDnT---Ik~~~~~~-ddd---- 184 (312)
T KOG0645|consen 126 -----------DKSVWIWEIDEDDEFECIAVLQE--HTQDVKHVIWHPTEDLLFSCSYDNT---IKVYRDED-DDD---- 184 (312)
T ss_pred -----------CCeEEEEEecCCCcEEEEeeecc--ccccccEEEEcCCcceeEEeccCCe---EEEEeecC-CCC----
Confidence 3469999987443221 223332 2222336788888777765554432 33443222 211
Q ss_pred cccccCCCCCcEEee--eccc-ceEE-EEEecCCeEEEEeCCCCCCceEEE--EeCCCCCCceEeccCCCCCceeEEEEe
Q 004766 285 GFKKRDGLLPFVKLI--DGFD-AQYE-VIANDDTVFTFLTNKDAPKYKIIR--VDLKEPNDWFEVIPEAERDVLESATAV 358 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~--~~~~-~~~~-~~s~dg~~l~~~s~~~~~~~~l~~--~d~~~~~~~~~l~~~~~~~~l~~~~~~ 358 (732)
|.... .+.. -.+. .|.+.|.+|.-.+++. ..+|++ .++... ....+..+.|.
T Consensus 185 ----------W~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~--tv~Iw~~~~~~~~~----------~sr~~Y~v~W~ 242 (312)
T KOG0645|consen 185 ----------WECVQTLDGHENTVWSLAFDNIGSRLVSCSDDG--TVSIWRLYTDLSGM----------HSRALYDVPWD 242 (312)
T ss_pred ----------eeEEEEecCccceEEEEEecCCCceEEEecCCc--ceEeeeeccCcchh----------cccceEeeeec
Confidence 32221 1211 1122 3677888887665543 456666 333221 12345556665
Q ss_pred cCCEEEEEEecCCeeEEEE
Q 004766 359 NLNQMIVSYLSDVKYVLQI 377 (732)
Q Consensus 359 ~~~~l~~~~~~~g~~~l~~ 377 (732)
+.++.+...++.-+|+.
T Consensus 243 --~~~IaS~ggD~~i~lf~ 259 (312)
T KOG0645|consen 243 --NGVIASGGGDDAIRLFK 259 (312)
T ss_pred --ccceEeccCCCEEEEEE
Confidence 34555555554333433
No 245
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=98.00 E-value=0.0026 Score=62.51 Aligned_cols=221 Identities=14% Similarity=0.121 Sum_probs=130.9
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
+.-..|--....+.+++. ..+ .+|+.+++.+.+.+.-..+. ..+.++.-+|-+..++-++.|
T Consensus 59 ~~~~~Fth~~~~~i~sSt-k~d--~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D-------------- 121 (311)
T KOG1446|consen 59 VDLACFTHHSNTVIHSST-KED--DTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLD-------------- 121 (311)
T ss_pred ccEEEEecCCceEEEccC-CCC--CceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccC--------------
Confidence 344555444455555543 222 58999999998866533222 235788889988877766543
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
..|++|++.+...+..+..... + -++++|.|-..++... . ..|.++|+..-. .
T Consensus 122 -----~tvrLWDlR~~~cqg~l~~~~~--p----i~AfDp~GLifA~~~~--~---~~IkLyD~Rs~d-----------k 174 (311)
T KOG1446|consen 122 -----KTVRLWDLRVKKCQGLLNLSGR--P----IAAFDPEGLIFALANG--S---ELIKLYDLRSFD-----------K 174 (311)
T ss_pred -----CeEEeeEecCCCCceEEecCCC--c----ceeECCCCcEEEEecC--C---CeEEEEEecccC-----------C
Confidence 3699999987655433332221 1 3688999987766542 2 257788876521 1
Q ss_pred CCcEEeee--cccceEE--EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCC-ceeEEEEecCCEEEEEE
Q 004766 293 LPFVKLID--GFDAQYE--VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERD-VLESATAVNLNQMIVSY 367 (732)
Q Consensus 293 ~~~~~l~~--~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~l~~~~~~~~~~l~~~~ 367 (732)
.|.....- +...++. -|||||+.+++.++. ..++.+|.=+|.....+..+.... .--+..+++++.+++..
T Consensus 175 gPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~----s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~g 250 (311)
T KOG1446|consen 175 GPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNA----SFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSG 250 (311)
T ss_pred CCceeEccCCCCccceeeeEEcCCCCEEEEEeCC----CcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEe
Confidence 12222211 2223333 489999999887764 247788876665222222222111 11345667878888888
Q ss_pred ecCCeeEEEEEeCCCCceeeecccc-cceeeEeecccC
Q 004766 368 LSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARRE 404 (732)
Q Consensus 368 ~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~d 404 (732)
..+| +|.+|++++|+.+..+..+ .+.+..+.++|-
T Consensus 251 s~dg--~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~ 286 (311)
T KOG1446|consen 251 SDDG--TIHVWNLETGKKVAVLRGPNGGPVSCVRFNPR 286 (311)
T ss_pred cCCC--cEEEEEcCCCcEeeEecCCCCCCccccccCCc
Confidence 8875 7889999999875555544 344444445543
No 246
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=97.99 E-value=7e-05 Score=76.98 Aligned_cols=224 Identities=11% Similarity=0.019 Sum_probs=125.6
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
...+..++||++|+.++-+ +-...|++||++||..+.-...+.-...+.+.||+.-++++-
T Consensus 258 ~k~Vrd~~~s~~g~~fLS~-----sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G-------------- 318 (503)
T KOG0282|consen 258 RKPVRDASFNNCGTSFLSA-----SFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVG-------------- 318 (503)
T ss_pred hhhhhhhhccccCCeeeee-----ecceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEe--------------
Confidence 3457789999999987643 334689999999999765333333346788999996666653
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
....+|..||+.++.. |-+-..+-+.+..+.|-++|++.+.++.+. .-.||-+...-
T Consensus 319 ----~sd~ki~~wDiRs~kv----vqeYd~hLg~i~~i~F~~~g~rFissSDdk---s~riWe~~~~v------------ 375 (503)
T KOG0282|consen 319 ----GSDKKIRQWDIRSGKV----VQEYDRHLGAILDITFVDEGRRFISSSDDK---SVRIWENRIPV------------ 375 (503)
T ss_pred ----cCCCcEEEEeccchHH----HHHHHhhhhheeeeEEccCCceEeeeccCc---cEEEEEcCCCc------------
Confidence 2334789999887642 211122233456788899999976555332 24444433221
Q ss_pred CCCCcEEeeeccc--ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC--CceEec-cCCCCCceeEEEEecCCEEEE
Q 004766 291 GLLPFVKLIDGFD--AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN--DWFEVI-PEAERDVLESATAVNLNQMIV 365 (732)
Q Consensus 291 ~~~~~~~l~~~~~--~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~--~~~~l~-~~~~~~~l~~~~~~~~~~l~~ 365 (732)
+......... .......|++..+.-.+.. ..++.+.+...- +.+..+ .+.-...--.+.+++|+..++
T Consensus 376 ---~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~d----N~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~ 448 (503)
T KOG0282|consen 376 ---PIKNIADPEMHTMPCLTLHPNGKWFAAQSMD----NYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLC 448 (503)
T ss_pred ---cchhhcchhhccCcceecCCCCCeehhhccC----ceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEE
Confidence 1211111111 0111245666655543332 234444322110 011111 111011122467788788888
Q ss_pred EEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCC
Q 004766 366 SYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARRED 405 (732)
Q Consensus 366 ~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~ 405 (732)
+...+ +.++.||..+-+.+..+..+.+.+..+.+.|-.
T Consensus 449 SGdsd--G~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e 486 (503)
T KOG0282|consen 449 SGDSD--GKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVE 486 (503)
T ss_pred eecCC--ccEEEeechhhhhhhccccCCcceEEEEecCCC
Confidence 87766 478899988766666666665556566666544
No 247
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=97.97 E-value=0.002 Score=66.36 Aligned_cols=112 Identities=14% Similarity=0.070 Sum_probs=66.2
Q ss_pred EEeEEECCCCc-EEEEEEeccCCceEEEEEEECCC----Cce---e--------cccccceeeeeEEEEeCCcEEEEEEe
Q 004766 134 LIKVSVSEDAK-YLAYALSYSGSDWATIKLMRIED----QIV---E--------ADALSWFKFSSIAWTHDSKGFFYSRY 197 (732)
Q Consensus 134 ~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl~~----g~~---~--------~~~~~~~~~~~~~WspDg~~l~y~~~ 197 (732)
+-...|.|--. .+|+. +.....+++++.- +.. + .....+-...+++|+.||..|++...
T Consensus 181 V~~~~WnP~~~~llasg-----~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~ 255 (524)
T KOG0273|consen 181 VFICAWNPLRDGLLASG-----SGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSE 255 (524)
T ss_pred eEEEecCchhhhhhhcc-----CCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeec
Confidence 34556888555 55543 3334566677652 110 1 11112223588999999999999865
Q ss_pred cCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCC
Q 004766 198 PAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS 277 (732)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 277 (732)
++ .+..|+....... .+ ..+.+-+.++.|+.+|.||+-..-++ .+.++|.-
T Consensus 256 ~G-------------------~~riw~~~G~l~~---tl--~~HkgPI~slKWnk~G~yilS~~vD~-----ttilwd~~ 306 (524)
T KOG0273|consen 256 DG-------------------EARIWNKDGNLIS---TL--GQHKGPIFSLKWNKKGTYILSGGVDG-----TTILWDAH 306 (524)
T ss_pred Cc-------------------EEEEEecCchhhh---hh--hccCCceEEEEEcCCCCEEEeccCCc-----cEEEEecc
Confidence 43 4667776554321 22 12334467899999999997654433 35677876
Q ss_pred CC
Q 004766 278 AL 279 (732)
Q Consensus 278 ~~ 279 (732)
++
T Consensus 307 ~g 308 (524)
T KOG0273|consen 307 TG 308 (524)
T ss_pred Cc
Confidence 54
No 248
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.96 E-value=4.8e-05 Score=74.25 Aligned_cols=168 Identities=18% Similarity=0.086 Sum_probs=79.5
Q ss_pred CccEEEEEcCCCCccCCCCcCh---hHHHHHHhcCcEEEEEcccC-----C--C-------------CCchhHHhccccc
Q 004766 480 SHPCLLYGYGGFNISVTPSFSV---SRTILMRHLGAVFCIANIRG-----G--G-------------EYGEEWHKGGALA 536 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~---~~~~~l~~~G~~v~~~~~rG-----~--g-------------~~g~~~~~~~~~~ 536 (732)
+.+-||.+||...+. ..|.. .+...|.+.++-++.+|-+- . . +-...|......
T Consensus 3 ~k~riLcLHG~~~na--~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~- 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNA--EIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD- 79 (212)
T ss_dssp ---EEEEE--TT--H--HHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S--
T ss_pred CCceEEEeCCCCcCH--HHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC-
Confidence 457899999976543 23332 23455562388888888641 1 1 112234433221
Q ss_pred CCccHHHHHHHHHHHHH----HcCCCCCCcEEEEecChhHHHHHHHHhh----C----CCeeeEEEEcCCcccccccccC
Q 004766 537 KKQNCFDDFISASEYLI----SAGYTQSRKLCIEGGSNGGLLVGACINQ----R----PDLFGCALAHVGVMDMLRYHKF 604 (732)
Q Consensus 537 ~~~~~~~D~~~~~~~l~----~~~~~d~~~i~i~G~S~GG~l~~~~~~~----~----p~~f~a~v~~~p~~d~~~~~~~ 604 (732)
.....++..++++|. ++|- =.||+|+|.||.+++.++.+ . .-.|+.+|+.+++.-....
T Consensus 80 --~~~~~~~~~sl~~l~~~i~~~GP----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~--- 150 (212)
T PF03959_consen 80 --DHEYEGLDESLDYLRDYIEENGP----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD--- 150 (212)
T ss_dssp --SGGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE----
T ss_pred --cccccCHHHHHHHHHHHHHhcCC----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh---
Confidence 223444555555443 3443 36999999999999888763 1 1257888877775421100
Q ss_pred CCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCC
Q 004766 605 TIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLE 684 (732)
Q Consensus 605 ~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~ 684 (732)
+.+.. ... .+..|+|-++|.+|..+++..+.++++....
T Consensus 151 ------------------------~~~~~-~~~---------~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~------- 189 (212)
T PF03959_consen 151 ------------------------YQELY-DEP---------KISIPTLHVIGENDPVVPPERSEALAEMFDP------- 189 (212)
T ss_dssp ------------------------GTTTT---T---------T---EEEEEEETT-SSS-HHHHHHHHHHHHH-------
T ss_pred ------------------------hhhhh-ccc---------cCCCCeEEEEeCCCCCcchHHHHHHHHhccC-------
Confidence 11111 111 3788999999999999999999999888774
Q ss_pred CCCCCCCEEEEEeCCCCCCCCCc
Q 004766 685 NSPQTNPIIGRIERKAGHGVGLP 707 (732)
Q Consensus 685 ~~~~~~~~~~~~~~~~gH~~~~~ 707 (732)
. ..++.. ++||.+-..
T Consensus 190 ----~--~~v~~h-~gGH~vP~~ 205 (212)
T PF03959_consen 190 ----D--ARVIEH-DGGHHVPRK 205 (212)
T ss_dssp ----H--EEEEEE-SSSSS----
T ss_pred ----C--cEEEEE-CCCCcCcCC
Confidence 1 355555 679987543
No 249
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=97.95 E-value=0.0064 Score=56.60 Aligned_cols=206 Identities=15% Similarity=0.154 Sum_probs=108.4
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECC--C----CceecccccceeeeeEEEEeCC---cEEEEEEecCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIE--D----QIVEADALSWFKFSSIAWTHDS---KGFFYSRYPAP 200 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~--~----g~~~~~~~~~~~~~~~~WspDg---~~l~y~~~~~~ 200 (732)
+..++.-..|||+|++|| .|+...+|.++... | |..+...........++|..|. ..|+.+.
T Consensus 88 hkgsiyc~~ws~~gelia-----tgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~---- 158 (350)
T KOG0641|consen 88 HKGSIYCTAWSPCGELIA-----TGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASA---- 158 (350)
T ss_pred cCccEEEEEecCccCeEE-----ecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEec----
Confidence 456788899999999999 44555678877654 2 2222222222223455554331 2233221
Q ss_pred CCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEE-eEEecCCcEEEEEEecCCcceEEEEEEeCCCC
Q 004766 201 KEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFS-GHVTEDGQYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~-~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
.....+||.-+-++++.-. .+.+ +.+.+.. ..| +|-.++-. .. ...|..+|+.-.
T Consensus 159 -------------gagdc~iy~tdc~~g~~~~--a~sg--htghilalysw--n~~m~~sg--sq---dktirfwdlrv~ 214 (350)
T KOG0641|consen 159 -------------GAGDCKIYITDCGRGQGFH--ALSG--HTGHILALYSW--NGAMFASG--SQ---DKTIRFWDLRVN 214 (350)
T ss_pred -------------CCCcceEEEeecCCCCcce--eecC--CcccEEEEEEe--cCcEEEcc--CC---CceEEEEeeecc
Confidence 2345688988888765321 1211 1122221 223 33332211 11 233556665431
Q ss_pred CCCcccccccCCCCCcEEeeeccc-----ce-E--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCc
Q 004766 280 PEGLEGFKKRDGLLPFVKLIDGFD-----AQ-Y--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDV 351 (732)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~~~-----~~-~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 351 (732)
.++..+-..+. .. + ..+.|.|+.|. ... ....-+.+|+.++..++...|+. ..
T Consensus 215 -------------~~v~~l~~~~~~~glessavaav~vdpsgrll~-sg~---~dssc~lydirg~r~iq~f~phs--ad 275 (350)
T KOG0641|consen 215 -------------SCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLA-SGH---ADSSCMLYDIRGGRMIQRFHPHS--AD 275 (350)
T ss_pred -------------ceeeeccCcccCCCcccceeEEEEECCCcceee-ecc---CCCceEEEEeeCCceeeeeCCCc--cc
Confidence 11111211110 01 1 13567665443 222 23457788988887677788887 56
Q ss_pred eeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecc
Q 004766 352 LESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP 390 (732)
Q Consensus 352 l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~ 390 (732)
+..+.++++-+.+++.+-+ ..|.+-|++ |....+|+
T Consensus 276 ir~vrfsp~a~yllt~syd--~~ikltdlq-gdla~el~ 311 (350)
T KOG0641|consen 276 IRCVRFSPGAHYLLTCSYD--MKIKLTDLQ-GDLAHELP 311 (350)
T ss_pred eeEEEeCCCceEEEEeccc--ceEEEeecc-cchhhcCc
Confidence 8889999865555666555 578888887 65544443
No 250
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.93 E-value=0.00013 Score=73.15 Aligned_cols=121 Identities=18% Similarity=0.247 Sum_probs=85.2
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC----CCcChhHHHHHHhcCcEEEEEcccCCCCC
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT----PSFSVSRTILMRHLGAVFCIANIRGGGEY 525 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~----~~~~~~~~~~l~~~G~~v~~~~~rG~g~~ 525 (732)
.++++.+.. |+ +.|-+..+.-++. ++.-.||+.-|-.+.-.. ......+..+..+.|..|+++||||-|..
T Consensus 111 ~~kRv~Iq~-D~-~~IDt~~I~~~~a---~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S 185 (365)
T PF05677_consen 111 SVKRVPIQY-DG-VKIDTMAIHQPEA---KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSS 185 (365)
T ss_pred ceeeEEEee-CC-EEEEEEEeeCCCC---CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccC
Confidence 567777776 89 9999887764433 345567776664322111 12234567777879999999999997632
Q ss_pred chhHHhcccccCCccHHHHHHHHHHHHHHcC-CCCCCcEEEEecChhHHHHHHHHhhC
Q 004766 526 GEEWHKGGALAKKQNCFDDFISASEYLISAG-YTQSRKLCIEGGSNGGLLVGACINQR 582 (732)
Q Consensus 526 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-~~d~~~i~i~G~S~GG~l~~~~~~~~ 582 (732)
.|.. ....-..|..++++||.++. -+.+++|.+.|+|.||.+++.++.++
T Consensus 186 ------~G~~-s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 186 ------TGPP-SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ------CCCC-CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 2222 23445789999999999753 35789999999999999988877653
No 251
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=97.93 E-value=0.00077 Score=64.43 Aligned_cols=205 Identities=12% Similarity=0.011 Sum_probs=122.1
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC-------Cce-ecccccceeeeeEEEEeCCcEEEEEEecCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED-------QIV-EADALSWFKFSSIAWTHDSKGFFYSRYPAPKEG 203 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~-------g~~-~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~ 203 (732)
..+..+.||++|++++++.+..=.....|.++|+.. .++ +.......+.....|+|-++.|++...+
T Consensus 94 ~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~----- 168 (327)
T KOG0643|consen 94 SPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHED----- 168 (327)
T ss_pred CeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCC-----
Confidence 346778899999999999987655567899999873 231 2221222245778999999999987433
Q ss_pred CCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCc
Q 004766 204 KDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGL 283 (732)
Q Consensus 204 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 283 (732)
..|-.|++.++.. ++-....+..-+.++.+|||..+.+-.+.+. + -.++|..+..
T Consensus 169 --------------G~is~~da~~g~~---~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dt---t--akl~D~~tl~--- 223 (327)
T KOG0643|consen 169 --------------GSISIYDARTGKE---LVDSDEEHSSKINDLQFSRDRTYFITGSKDT---T--AKLVDVRTLE--- 223 (327)
T ss_pred --------------CcEEEEEcccCce---eeechhhhccccccccccCCcceEEecccCc---c--ceeeecccee---
Confidence 3577788776532 3322233334556889999999875444322 2 3455665521
Q ss_pred ccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC------------CceEeccCCCCCc
Q 004766 284 EGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN------------DWFEVIPEAERDV 351 (732)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~------------~~~~l~~~~~~~~ 351 (732)
..+............++|--+++++....++ ..+-......++ ++-.+-.|- ..
T Consensus 224 ----------v~Kty~te~PvN~aaisP~~d~VilgGGqeA--~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHF--GP 289 (327)
T KOG0643|consen 224 ----------VLKTYTTERPVNTAAISPLLDHVILGGGQEA--MDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHF--GP 289 (327)
T ss_pred ----------eEEEeeecccccceecccccceEEecCCcee--eeeeeecccccchhhhHHHHHHHHHhccccccc--cC
Confidence 0122222222223357786666665433322 123333322232 112222222 46
Q ss_pred eeEEEEecCCEEEEEEecCCeeEEEEEeC
Q 004766 352 LESATAVNLNQMIVSYLSDVKYVLQIRDL 380 (732)
Q Consensus 352 l~~~~~~~~~~l~~~~~~~g~~~l~~~d~ 380 (732)
|..+++.+++..|.+..++|.-+|..+|.
T Consensus 290 INsvAfhPdGksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 290 INSVAFHPDGKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred cceeEECCCCcccccCCCCceEEEEEecc
Confidence 78899999889999999998878777764
No 252
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.92 E-value=0.00043 Score=71.74 Aligned_cols=149 Identities=15% Similarity=0.126 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHcCCCC--CCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccc-ccc-----c---------C-
Q 004766 543 DDFISASEYLISAGYTQ--SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDML-RYH-----K---------F- 604 (732)
Q Consensus 543 ~D~~~~~~~l~~~~~~d--~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~-~~~-----~---------~- 604 (732)
-|.+.|+.+|+++-..- .-++...|+|+||||+..++--+|.+|.+++-.++.+-.. ++. . +
T Consensus 164 iD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~~~ 243 (403)
T PF11144_consen 164 IDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGEFF 243 (403)
T ss_pred HHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCccccccccccc
Confidence 57778888888762222 2389999999999999999999999999998776644321 110 0 0
Q ss_pred ---------CCCCccccccCCC--CCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHH
Q 004766 605 ---------TIGHAWVSDFGCS--EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLA 673 (732)
Q Consensus 605 ---------~~~~~~~~~~g~p--~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~ 673 (732)
.....|+.-.++| -.++.+ .++..--..++.-. +.. ..+|-....|+..|+.+|+.+-.+++.
T Consensus 244 ~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~-~IR~iLn~~HL~iq---s~~--n~~~~yvsYHs~~D~~~p~~~K~~l~~ 317 (403)
T PF11144_consen 244 NFKNIRIYCFDKTFWTRNKNSPYYFSKARY-IIRSILNPDHLKIQ---SNY--NKKIIYVSYHSIKDDLAPAEDKEELYE 317 (403)
T ss_pred ccCCEEEEEEeccccccCCCCccccChHHH-HHHHhcChHHHHHH---Hhc--ccceEEEEEeccCCCCCCHHHHHHHHH
Confidence 0011243333333 122211 12222111111100 000 034667788999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCCCEEEEEeCC-----------CCCCCCCc
Q 004766 674 TMQYVLCTSLENSPQTNPIIGRIERK-----------AGHGVGLP 707 (732)
Q Consensus 674 ~l~~~~~~~~~~~~~~~~~~~~~~~~-----------~gH~~~~~ 707 (732)
.|+++ |-+++++...+ -.||++-+
T Consensus 318 ~l~~l----------gfda~l~lIkdes~iDGkfIKnl~HGmgis 352 (403)
T PF11144_consen 318 ILKNL----------GFDATLHLIKDESEIDGKFIKNLEHGMGIS 352 (403)
T ss_pred HHHHc----------CCCeEEEEecChhhccchheeccccCCCCC
Confidence 99998 88888887733 47887654
No 253
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.91 E-value=0.00027 Score=79.79 Aligned_cols=105 Identities=11% Similarity=0.034 Sum_probs=66.7
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
-.+..+.||||++++|-. +-...|.||+..+.+.+...... ..+-+++|.|=|++|+-.++|.
T Consensus 130 ~DV~Dv~Wsp~~~~lvS~-----s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDr----------- 193 (942)
T KOG0973|consen 130 SDVLDVNWSPDDSLLVSV-----SLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDR----------- 193 (942)
T ss_pred CccceeccCCCccEEEEe-----cccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCc-----------
Confidence 446789999999998854 23368999999988654322211 1246899999999998776443
Q ss_pred cccCCcccEEEEEECCCCCCCCe--EEEecCCCCeeEEEeEEecCCcEEEEE
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDI--LCWKDPEHPKYIFSGHVTEDGQYLVMC 260 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~--~v~~~~~~~~~~~~~~~SpDg~~l~~~ 260 (732)
.|.+|+..+=+.+.. -.|++.....++..++|||||++|+..
T Consensus 194 --------tikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~ 237 (942)
T KOG0973|consen 194 --------TLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASP 237 (942)
T ss_pred --------eEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecch
Confidence 455565433111110 012211223466789999999999754
No 254
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=97.91 E-value=0.0034 Score=66.01 Aligned_cols=229 Identities=11% Similarity=0.067 Sum_probs=122.6
Q ss_pred ceEEEEEEECCCCceecccc----cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCC
Q 004766 156 DWATIKLMRIEDQIVEADAL----SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSE 231 (732)
Q Consensus 156 e~~~i~v~dl~~g~~~~~~~----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~ 231 (732)
|..+|.|||+.||....... .-....-+.||.|+|+++-...+ .|-.+.-.+
T Consensus 280 e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~--------------------sisIyEtps---- 335 (698)
T KOG2314|consen 280 EGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN--------------------SISIYETPS---- 335 (698)
T ss_pred CCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccc--------------------eEEEEecCc----
Confidence 44689999999998542110 11123568999999977754321 122222110
Q ss_pred CeEEEecC-CCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEE
Q 004766 232 DILCWKDP-EHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIA 310 (732)
Q Consensus 232 ~~~v~~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s 310 (732)
..+++.. -....+-++.|||-+..|++.+........++-++.+.++. ....+.|..-.+.. ..|.
T Consensus 336 -f~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~-----------~iRt~nlfnVsDck-LhWQ 402 (698)
T KOG2314|consen 336 -FMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKR-----------EIRTKNLFNVSDCK-LHWQ 402 (698)
T ss_pred -eeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccc-----------eeeeccceeeeccE-EEec
Confidence 1122111 01122346889999999999875544334556666655421 00111222211221 2488
Q ss_pred ecCCeEEEEeCCCC--------CCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCEEEEEEecCCeeEEEEEeCC
Q 004766 311 NDDTVFTFLTNKDA--------PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLK 381 (732)
Q Consensus 311 ~dg~~l~~~s~~~~--------~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~l~~~~~~~g~~~l~~~d~~ 381 (732)
.+|+.|.|-.++.. .+..|++++-+ .-....++-. ..+-.|.|-+ ++++.+.........+..|-.+
T Consensus 403 k~gdyLcvkvdR~tK~~~~g~f~n~eIfrireK--dIpve~velk--e~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e 478 (698)
T KOG2314|consen 403 KSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREK--DIPVEVVELK--ESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVE 478 (698)
T ss_pred cCCcEEEEEEEeeccccccceEeeEEEEEeecc--CCCceeeecc--hheeeeeeccCCCeEEEEEccccccceeEEEee
Confidence 88999999877521 13455555422 2123334333 4456788886 4666666665555666666554
Q ss_pred -CCceeeec-ccccceeeEeecccCCcEEEEEE-ecCCCCceEEEEECC
Q 004766 382 -NGSLLHQL-PIEIGSVNAISARREDSVVFISF-TSFLIPGIVYQCNLK 427 (732)
Q Consensus 382 -~g~~~~~l-~~~~g~v~~~~~s~d~~~l~~~~-ss~~~p~~~y~~d~~ 427 (732)
++.....+ .++.-....+.++|.|.-+++.. .| .-+.++-||+.
T Consensus 479 ~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s--~~g~l~F~D~~ 525 (698)
T KOG2314|consen 479 TNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVS--RRGDLEFYDTD 525 (698)
T ss_pred cCCCchhhhhhhcccccceEEEcCCCcEEEEEEecc--cccceEEEecc
Confidence 23221222 23444455677889887554432 22 45677777765
No 255
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=97.91 E-value=0.00031 Score=72.33 Aligned_cols=240 Identities=12% Similarity=0.043 Sum_probs=135.3
Q ss_pred CCEEEEeEEECC-CCcEEEEEEeccCCceEEEEEEECCC-Cceecccccce-eeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 130 GTAALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIED-QIVEADALSWF-KFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 130 ~~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~~-g~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
+.-.++.+.|.| .|.+|+ +. | -...|+||++-+ +..+..-.+.. .+..+.|+++|+.|+-++++
T Consensus 213 H~kgvsai~~fp~~~hLlL-S~---g-mD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD-------- 279 (503)
T KOG0282|consen 213 HTKGVSAIQWFPKKGHLLL-SG---G-MDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFD-------- 279 (503)
T ss_pred CccccchhhhccceeeEEE-ec---C-CCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecc--------
Confidence 345678889999 555444 32 2 236899999876 55554333222 24689999999999987654
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
..|.+||..|++.. .-|+... ...-+.+-||+..++++... ..+|..+|..+++
T Consensus 280 -----------~~lKlwDtETG~~~--~~f~~~~---~~~cvkf~pd~~n~fl~G~s----d~ki~~wDiRs~k------ 333 (503)
T KOG0282|consen 280 -----------RFLKLWDTETGQVL--SRFHLDK---VPTCVKFHPDNQNIFLVGGS----DKKIRQWDIRSGK------ 333 (503)
T ss_pred -----------eeeeeeccccceEE--EEEecCC---CceeeecCCCCCcEEEEecC----CCcEEEEeccchH------
Confidence 36889999887532 2233221 22457788999887776532 3568888987743
Q ss_pred cccCCCCCcEEeeecccce---E--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC
Q 004766 287 KKRDGLLPFVKLIDGFDAQ---Y--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN 361 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~~~---~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~ 361 (732)
++..++.. + ..|-++|++++-.++.. ..++|.+ ..+..++. +..........+...+.+
T Consensus 334 -----------vvqeYd~hLg~i~~i~F~~~g~rFissSDdk--s~riWe~--~~~v~ik~-i~~~~~hsmP~~~~~P~~ 397 (503)
T KOG0282|consen 334 -----------VVQEYDRHLGAILDITFVDEGRRFISSSDDK--SVRIWEN--RIPVPIKN-IADPEMHTMPCLTLHPNG 397 (503)
T ss_pred -----------HHHHHHhhhhheeeeEEccCCceEeeeccCc--cEEEEEc--CCCccchh-hcchhhccCcceecCCCC
Confidence 22222211 1 13567788776544432 4445444 33332222 222223445566666644
Q ss_pred EEEEEEecCCeeEEEEEeCCCC--c-eeeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 362 QMIVSYLSDVKYVLQIRDLKNG--S-LLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 362 ~l~~~~~~~g~~~l~~~d~~~g--~-~~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
..++...-+ ..|+++....- . ..++.... .|..-.+.+||||.+|. |-..-+.++.||..+-+
T Consensus 398 ~~~~aQs~d--N~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~----SGdsdG~v~~wdwkt~k 465 (503)
T KOG0282|consen 398 KWFAAQSMD--NYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLC----SGDSDGKVNFWDWKTTK 465 (503)
T ss_pred CeehhhccC--ceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEE----eecCCccEEEeechhhh
Confidence 454444444 35666553210 0 00122222 23333677899998664 23445789999977654
No 256
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=97.90 E-value=0.00068 Score=71.67 Aligned_cols=222 Identities=17% Similarity=0.118 Sum_probs=123.7
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcE-EEEEEecCCC--CCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKG-FFYSRYPAPK--EGKDM 206 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~-l~y~~~~~~~--~~~~~ 206 (732)
+.-.+..++..|.|.+|| .|++..+++||.+.||..+....-...+..++|.|.++. |+.++..... ....+
T Consensus 399 Htg~Vr~iSvdp~G~wla-----sGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~ 473 (733)
T KOG0650|consen 399 HTGLVRSISVDPSGEWLA-----SGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIF 473 (733)
T ss_pred cCCeEEEEEecCCcceee-----ecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCccc
Confidence 344577899999999998 566778999999999996643322223588999998863 3333322110 00111
Q ss_pred CCC----C----c----ccCCcccEEEEEECCCCC--CCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEE
Q 004766 207 DAG----T----E----TDSNLYHEFYYHFLGTKQ--SEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVY 272 (732)
Q Consensus 207 ~~~----~----~----~~~~~~~~v~~~~lgt~~--~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~ 272 (732)
++. . . .+...+.++..|..+... ...+++.-. .+.-+.++.|..+|.||+.+...+. +..++
T Consensus 474 G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~--~~k~i~~vtWHrkGDYlatV~~~~~--~~~Vl 549 (733)
T KOG0650|consen 474 GDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIK--HPKSIRQVTWHRKGDYLATVMPDSG--NKSVL 549 (733)
T ss_pred cchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEe--cCCccceeeeecCCceEEEeccCCC--cceEE
Confidence 100 0 0 112223345556554221 112222211 1223458899999999988876554 56788
Q ss_pred EEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCce
Q 004766 273 YCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVL 352 (732)
Q Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l 352 (732)
+-.+..... ..+++.. .+ ......|.|....|++.|. ..|..+|+....-.+.|.+.. ..|
T Consensus 550 iHQLSK~~s----------Q~PF~ks-kG-~vq~v~FHPs~p~lfVaTq-----~~vRiYdL~kqelvKkL~tg~--kwi 610 (733)
T KOG0650|consen 550 IHQLSKRKS----------QSPFRKS-KG-LVQRVKFHPSKPYLFVATQ-----RSVRIYDLSKQELVKKLLTGS--KWI 610 (733)
T ss_pred EEecccccc----------cCchhhc-CC-ceeEEEecCCCceEEEEec-----cceEEEehhHHHHHHHHhcCC--eee
Confidence 888775321 1122111 11 1112236665555555433 246677876654334555544 568
Q ss_pred eEEEEec-CCEEEEEEecCCeeEEEEEeCCC
Q 004766 353 ESATAVN-LNQMIVSYLSDVKYVLQIRDLKN 382 (732)
Q Consensus 353 ~~~~~~~-~~~l~~~~~~~g~~~l~~~d~~~ 382 (732)
..+++.+ ++.|++..... ++..+|++-
T Consensus 611 S~msihp~GDnli~gs~d~---k~~WfDldl 638 (733)
T KOG0650|consen 611 SSMSIHPNGDNLILGSYDK---KMCWFDLDL 638 (733)
T ss_pred eeeeecCCCCeEEEecCCC---eeEEEEccc
Confidence 8888886 46677665443 688888863
No 257
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=97.89 E-value=0.0013 Score=67.69 Aligned_cols=218 Identities=11% Similarity=0.106 Sum_probs=121.1
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
+..+.-+|+|.+|+-. ....+||+|.+.+|..+..- ..-...+.+.||.||+.|+-...|.
T Consensus 84 v~al~s~n~G~~l~ag-----~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg------------- 145 (476)
T KOG0646|consen 84 VHALASSNLGYFLLAG-----TISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDG------------- 145 (476)
T ss_pred eeeeecCCCceEEEee-----cccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCc-------------
Confidence 5577789999988733 34568999999999976422 1111347789999998877655433
Q ss_pred cCCcccEEEEEECCCC-------CCCCeEEEecCCCCeeEEEeEEecCC--cEEEEEEecCCcceEEEEEEeCCCCCCCc
Q 004766 213 DSNLYHEFYYHFLGTK-------QSEDILCWKDPEHPKYIFSGHVTEDG--QYLVMCIEENCDPVNKVYYCDLSALPEGL 283 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~-------~~~~~~v~~~~~~~~~~~~~~~SpDg--~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 283 (732)
.|..|.+-+- .......|. ++..-+.++..++.| .+|+-.+.+ .-+.++|+..+.
T Consensus 146 ------~V~vW~l~~lv~a~~~~~~~p~~~f~--~HtlsITDl~ig~Gg~~~rl~TaS~D-----~t~k~wdlS~g~--- 209 (476)
T KOG0646|consen 146 ------AVLVWLLTDLVSADNDHSVKPLHIFS--DHTLSITDLQIGSGGTNARLYTASED-----RTIKLWDLSLGV--- 209 (476)
T ss_pred ------cEEEEEEEeecccccCCCccceeeec--cCcceeEEEEecCCCccceEEEecCC-----ceEEEEEeccce---
Confidence 3555543211 111122222 222233445555443 223222222 336667777642
Q ss_pred ccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCC----------------CCCceEeccCC
Q 004766 284 EGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE----------------PNDWFEVIPEA 347 (732)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~----------------~~~~~~l~~~~ 347 (732)
-+...+.+........+|-+.++|+ .+.+ +.++..++.+ +.....++.+.
T Consensus 210 ----------LLlti~fp~si~av~lDpae~~~yi-Gt~~---G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~ 275 (476)
T KOG0646|consen 210 ----------LLLTITFPSSIKAVALDPAERVVYI-GTEE---GKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHE 275 (476)
T ss_pred ----------eeEEEecCCcceeEEEcccccEEEe-cCCc---ceEEeeehhcCCcccccccccccccccceeeeecccc
Confidence 0222222221122246675555554 3332 3444444311 11345566666
Q ss_pred CCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeec
Q 004766 348 ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISA 401 (732)
Q Consensus 348 ~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~ 401 (732)
.+..|..++++-|+.++++...+| ++.+||..+.+.++.+..-.|.|..+..
T Consensus 276 ~~~~ITcLais~DgtlLlSGd~dg--~VcvWdi~S~Q~iRtl~~~kgpVtnL~i 327 (476)
T KOG0646|consen 276 NESAITCLAISTDGTLLLSGDEDG--KVCVWDIYSKQCIRTLQTSKGPVTNLQI 327 (476)
T ss_pred CCcceeEEEEecCccEEEeeCCCC--CEEEEecchHHHHHHHhhhccccceeEe
Confidence 445788888887788999998885 7899999866666666533455544443
No 258
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.89 E-value=1.8e-05 Score=89.52 Aligned_cols=128 Identities=19% Similarity=0.177 Sum_probs=84.5
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCc-cCCCCcCh-hHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccC-CccH
Q 004766 465 IPMFIVSKKNIKLDGSHPCLLYGYGGFNI-SVTPSFSV-SRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK-KQNC 541 (732)
Q Consensus 465 i~~~~~~p~~~~~~~~~P~vv~~hG~~~~-~~~~~~~~-~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~-~~~~ 541 (732)
+..-++.|+.....+ .|++|++|||.-. .....|.. .....+..+..+|+.++||-|- +| |...+.... +-..
T Consensus 97 LylNV~tp~~~~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~-lG--F~st~d~~~~gN~g 172 (545)
T KOG1516|consen 97 LYLNVYTPQGCSESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGP-LG--FLSTGDSAAPGNLG 172 (545)
T ss_pred ceEEEeccCCCccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEeccccee-ce--eeecCCCCCCCccc
Confidence 566677777643223 8999999999322 11111211 1134455578999999999652 22 222222222 2334
Q ss_pred HHHHHHHHHHHHHc---CCCCCCcEEEEecChhHHHHHHHHhh--CCCeeeEEEEcCCcc
Q 004766 542 FDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGVM 596 (732)
Q Consensus 542 ~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p~~ 596 (732)
+.|.+.|++|+.++ ---||++|.++|+|+||..+..++.- ...+|+.+|+.++..
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 78999999999865 23699999999999999998877763 225898888887753
No 259
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=97.89 E-value=0.0012 Score=64.87 Aligned_cols=203 Identities=15% Similarity=0.069 Sum_probs=102.6
Q ss_pred EEEEEECCCCceec-----ccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCC-
Q 004766 159 TIKLMRIEDQIVEA-----DALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSE- 231 (732)
Q Consensus 159 ~i~v~dl~~g~~~~-----~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~- 231 (732)
-|++||.-+|+... +..+. ....++.|||||.+|+-. +.+.|...++..+...
T Consensus 134 PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG--------------------ykrcirvFdt~RpGr~c 193 (406)
T KOG2919|consen 134 PIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG--------------------YKRCIRVFDTSRPGRDC 193 (406)
T ss_pred ceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec--------------------ccceEEEeeccCCCCCC
Confidence 47888888887431 11110 012678999999888743 3445666665322211
Q ss_pred C--eEEEecC-CCCeeEEEeEEecC-CcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceE-
Q 004766 232 D--ILCWKDP-EHPKYIFSGHVTED-GQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY- 306 (732)
Q Consensus 232 ~--~~v~~~~-~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 306 (732)
+ .+++... ...+.+.-+++||- .+.++..+... ...||-.+-. .|.. +..+....+
T Consensus 194 ~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q---~~giy~~~~~---------------~pl~-llggh~gGvT 254 (406)
T KOG2919|consen 194 PVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQ---RVGIYNDDGR---------------RPLQ-LLGGHGGGVT 254 (406)
T ss_pred cchhhhhcccccccceeeeeeccCCCCcceeeecccc---eeeeEecCCC---------------Ccee-eecccCCCee
Confidence 0 1111111 11234556788884 44665554322 2445543311 1122 222333222
Q ss_pred -EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCC-ceEeccCCC--CCceeEEEEecCCEEEEEEecCCeeEEEEEeCCC
Q 004766 307 -EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND-WFEVIPEAE--RDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKN 382 (732)
Q Consensus 307 -~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~l~~~~~--~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~ 382 (732)
..|.+||++|+.-+.. .-+|..+|+..-.. .-.|-.+.. +..| -|.+.+.+.+++....+| .|.+||+++
T Consensus 255 hL~~~edGn~lfsGaRk---~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI-~FDld~~~~~LasG~tdG--~V~vwdlk~ 328 (406)
T KOG2919|consen 255 HLQWCEDGNKLFSGARK---DDKILCWDIRYSRDPVYALERHVGDTNQRI-LFDLDPKGEILASGDTDG--SVRVWDLKD 328 (406)
T ss_pred eEEeccCcCeecccccC---CCeEEEEeehhccchhhhhhhhccCccceE-EEecCCCCceeeccCCCc--cEEEEecCC
Confidence 3589999998854433 34799999875431 111222221 1222 244455567777765554 688899875
Q ss_pred -CceeeecccccceeeEeecccCCc
Q 004766 383 -GSLLHQLPIEIGSVNAISARREDS 406 (732)
Q Consensus 383 -g~~~~~l~~~~g~v~~~~~s~d~~ 406 (732)
|.....+......+..+++.|-=.
T Consensus 329 ~gn~~sv~~~~sd~vNgvslnP~mp 353 (406)
T KOG2919|consen 329 LGNEVSVTGNYSDTVNGVSLNPIMP 353 (406)
T ss_pred CCCcccccccccccccceecCcccc
Confidence 553222222244566667666533
No 260
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=97.89 E-value=0.0015 Score=64.25 Aligned_cols=105 Identities=12% Similarity=0.183 Sum_probs=70.3
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee-cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE-ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~-~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
+..+.|+-|.-++..+....+ .+.+|++..-+-. ....+....+...|||||+.|+-++
T Consensus 51 i~yieW~ads~~ilC~~yk~~----~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~ts---------------- 110 (447)
T KOG4497|consen 51 IVYIEWKADSCHILCVAYKDP----KVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTS---------------- 110 (447)
T ss_pred hhheeeeccceeeeeeeeccc----eEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeee----------------
Confidence 347889999999888875543 6889998766522 1111222347899999999999874
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENC 265 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 265 (732)
....+|-+|.+.|... ....-+.. ..-++++.|||++.++.+.+..
T Consensus 111 --eF~lriTVWSL~t~~~---~~~~~pK~--~~kg~~f~~dg~f~ai~sRrDC 156 (447)
T KOG4497|consen 111 --EFDLRITVWSLNTQKG---YLLPHPKT--NVKGYAFHPDGQFCAILSRRDC 156 (447)
T ss_pred --cceeEEEEEEecccee---EEeccccc--CceeEEECCCCceeeeeecccH
Confidence 2344677788876532 22222222 1247899999999999887654
No 261
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.89 E-value=5.8e-05 Score=85.67 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=66.1
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchh--HH-----hc---cc---------ccCCc
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE--WH-----KG---GA---------LAKKQ 539 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~--~~-----~~---~~---------~~~~~ 539 (732)
...|+||++||..+... .|.. +...|.++||.|+++|+||+|..... .. .. +. +.+-.
T Consensus 447 ~g~P~VVllHG~~g~~~--~~~~-lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~r 523 (792)
T TIGR03502 447 DGWPVVIYQHGITGAKE--NALA-FAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLR 523 (792)
T ss_pred CCCcEEEEeCCCCCCHH--HHHH-HHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHH
Confidence 34689999999877643 3332 34556658999999999999875322 00 00 00 11223
Q ss_pred cHHHHHHHHHHHHH------Hc----CCCCCCcEEEEecChhHHHHHHHHhh
Q 004766 540 NCFDDFISASEYLI------SA----GYTQSRKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 540 ~~~~D~~~~~~~l~------~~----~~~d~~~i~i~G~S~GG~l~~~~~~~ 581 (732)
....|+......|. +. +-.+..++.++||||||.+...++..
T Consensus 524 Q~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 524 QSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 34677777777665 11 12456799999999999999988875
No 262
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=97.87 E-value=0.0014 Score=65.44 Aligned_cols=244 Identities=12% Similarity=0.010 Sum_probs=135.3
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccce-eeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWF-KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
..++..+-+.|+--.++-+ ++..+|++||..+|+...--.+.. ....++++.-|+.|+-++.+-
T Consensus 108 r~~vt~v~~hp~~~~v~~a-----s~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl---------- 172 (406)
T KOG0295|consen 108 RSSVTRVIFHPSEALVVSA-----SEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDL---------- 172 (406)
T ss_pred ccceeeeeeccCceEEEEe-----cCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCcc----------
Confidence 3456677788876544433 345799999999999632111111 136788988898887665332
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
.+.+|+.++........ .+. ...+..+.+=|-|.+|+-.+.+ +.|..++.+++-+
T Consensus 173 ---------~~~LWd~~~~~~c~ks~-~gh--~h~vS~V~f~P~gd~ilS~srD-----~tik~We~~tg~c-------- 227 (406)
T KOG0295|consen 173 ---------SAKLWDFDTFFRCIKSL-IGH--EHGVSSVFFLPLGDHILSCSRD-----NTIKAWECDTGYC-------- 227 (406)
T ss_pred ---------chhheeHHHHHHHHHHh-cCc--ccceeeEEEEecCCeeeecccc-----cceeEEeccccee--------
Confidence 25667766531110011 111 1234577888999888765543 3377788887532
Q ss_pred CCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec----------
Q 004766 290 DGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN---------- 359 (732)
Q Consensus 290 ~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~---------- 359 (732)
...+....+ =+..+.+.++..++.+..+.. .|-.+-++++..-.++..++ ..++-+.|.+
T Consensus 228 -----v~t~~~h~e-wvr~v~v~~DGti~As~s~dq--tl~vW~~~t~~~k~~lR~hE--h~vEci~wap~~~~~~i~~a 297 (406)
T KOG0295|consen 228 -----VKTFPGHSE-WVRMVRVNQDGTIIASCSNDQ--TLRVWVVATKQCKAELREHE--HPVECIAWAPESSYPSISEA 297 (406)
T ss_pred -----EEeccCchH-hEEEEEecCCeeEEEecCCCc--eEEEEEeccchhhhhhhccc--cceEEEEecccccCcchhhc
Confidence 122222111 122344444444444443322 34444445542111222221 2233322221
Q ss_pred -----CCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 360 -----LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 360 -----~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+..+.+...+| ..|..||..+|..+-+|......|.+++++|.|++++ +... -.++..||+..+.
T Consensus 298 t~~~~~~~~l~s~SrD--ktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~-ScaD---Dktlrvwdl~~~~ 367 (406)
T KOG0295|consen 298 TGSTNGGQVLGSGSRD--KTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYIL-SCAD---DKTLRVWDLKNLQ 367 (406)
T ss_pred cCCCCCccEEEeeccc--ceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEE-EEec---CCcEEEEEeccce
Confidence 12466666666 4788999999987666665666788899999887554 5544 3467777877653
No 263
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=97.85 E-value=0.0017 Score=63.15 Aligned_cols=194 Identities=13% Similarity=0.112 Sum_probs=115.3
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
+....|+|||..|+-. +..++|++|+.-... ++..+.. .+.+-++.+.|++||..|+-
T Consensus 50 I~~~~F~P~gs~~aSg-------------------G~Dr~I~LWnv~gdc-eN~~~lk--gHsgAVM~l~~~~d~s~i~S 107 (338)
T KOG0265|consen 50 IYTIKFHPDGSCFASG-------------------GSDRAIVLWNVYGDC-ENFWVLK--GHSGAVMELHGMRDGSHILS 107 (338)
T ss_pred EEEEEECCCCCeEeec-------------------CCcceEEEEeccccc-cceeeec--cccceeEeeeeccCCCEEEE
Confidence 4678899999877753 466789999976443 3333333 34456789999999999976
Q ss_pred EEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEe--cCCeEEEEeCCCCCCceEEEEeCCCC
Q 004766 260 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIAN--DDTVFTFLTNKDAPKYKIIRVDLKEP 337 (732)
Q Consensus 260 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~--dg~~l~~~s~~~~~~~~l~~~d~~~~ 337 (732)
.+.+ ..++.+|.++|+. .++...... -+....| .|-.++. +. .+..++-++|+.+.
T Consensus 108 ~gtD-----k~v~~wD~~tG~~-------------~rk~k~h~~-~vNs~~p~rrg~~lv~-Sg--sdD~t~kl~D~R~k 165 (338)
T KOG0265|consen 108 CGTD-----KTVRGWDAETGKR-------------IRKHKGHTS-FVNSLDPSRRGPQLVC-SG--SDDGTLKLWDIRKK 165 (338)
T ss_pred ecCC-----ceEEEEeccccee-------------eehhccccc-eeeecCccccCCeEEE-ec--CCCceEEEEeeccc
Confidence 6532 4588999988642 111111111 1112223 3433333 22 23457888888766
Q ss_pred CCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCC
Q 004766 338 NDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLI 417 (732)
Q Consensus 338 ~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~ 417 (732)
..++ +++. ...+.++.|.....=+++..-| ..|.+||+..+..+..+......|..++.+++|..+. ..++
T Consensus 166 ~~~~-t~~~--kyqltAv~f~d~s~qv~sggId--n~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~ll--snsM-- 236 (338)
T KOG0265|consen 166 EAIK-TFEN--KYQLTAVGFKDTSDQVISGGID--NDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLL--SNSM-- 236 (338)
T ss_pred chhh-cccc--ceeEEEEEecccccceeecccc--CceeeeccccCcceEEeecccCceeeEEeccCCCccc--cccc--
Confidence 5333 2322 3567788887543334444444 4788999965555456665566788888889887543 2232
Q ss_pred CceEEEEEC
Q 004766 418 PGIVYQCNL 426 (732)
Q Consensus 418 p~~~y~~d~ 426 (732)
-.++-++|.
T Consensus 237 d~tvrvwd~ 245 (338)
T KOG0265|consen 237 DNTVRVWDV 245 (338)
T ss_pred cceEEEEEe
Confidence 245555554
No 264
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=97.83 E-value=0.00065 Score=64.21 Aligned_cols=197 Identities=13% Similarity=0.131 Sum_probs=119.2
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc--cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL--SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
+.-+..++||.|.++|+ .+|.| .-|+|+|++.-+.-+... ....+..+.|....+.|+-++.+
T Consensus 100 khivk~~af~~ds~~ll----tgg~e-kllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd---------- 164 (334)
T KOG0278|consen 100 KHIVKAVAFSQDSNYLL----TGGQE-KLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADD---------- 164 (334)
T ss_pred hheeeeEEecccchhhh----ccchH-HHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccC----------
Confidence 34577889999999887 23443 578999997654222111 11123567888888888765432
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
..|.+|+..|+.....+-+ + .-..++.+|+||++|.+.-. +.|-.+|..+..
T Consensus 165 ---------~tVRLWD~rTgt~v~sL~~--~---s~VtSlEvs~dG~ilTia~g------ssV~Fwdaksf~-------- 216 (334)
T KOG0278|consen 165 ---------KTVRLWDHRTGTEVQSLEF--N---SPVTSLEVSQDGRILTIAYG------SSVKFWDAKSFG-------- 216 (334)
T ss_pred ---------CceEEEEeccCcEEEEEec--C---CCCcceeeccCCCEEEEecC------ceeEEecccccc--------
Confidence 3588888887754332222 1 12357889999999876532 235566765521
Q ss_pred cCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 289 RDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 289 ~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
.++...-.........+|+. .+++.. +..+.++++|-.++.++..... .....+..+.+++++.+|.+.+
T Consensus 217 -----~lKs~k~P~nV~SASL~P~k-~~fVaG---ged~~~~kfDy~TgeEi~~~nk-gh~gpVhcVrFSPdGE~yAsGS 286 (334)
T KOG0278|consen 217 -----LLKSYKMPCNVESASLHPKK-EFFVAG---GEDFKVYKFDYNTGEEIGSYNK-GHFGPVHCVRFSPDGELYASGS 286 (334)
T ss_pred -----ceeeccCccccccccccCCC-ceEEec---CcceEEEEEeccCCceeeeccc-CCCCceEEEEECCCCceeeccC
Confidence 01111111111222366754 555543 3467899999999874332212 2235678899999889999999
Q ss_pred cCCeeEEEEEeC
Q 004766 369 SDVKYVLQIRDL 380 (732)
Q Consensus 369 ~~g~~~l~~~d~ 380 (732)
+||.-+||....
T Consensus 287 EDGTirlWQt~~ 298 (334)
T KOG0278|consen 287 EDGTIRLWQTTP 298 (334)
T ss_pred CCceEEEEEecC
Confidence 998655555543
No 265
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=97.83 E-value=0.0042 Score=58.43 Aligned_cols=219 Identities=11% Similarity=0.066 Sum_probs=120.7
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+-....|-|...+|-. +|+ ..+++||++||+.... .........+.|..++ .++++.
T Consensus 60 ~EVlD~~~s~Dnskf~s~---GgD--k~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNees-SVv~Sg-------------- 119 (307)
T KOG0316|consen 60 HEVLDAALSSDNSKFASC---GGD--KAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEES-SVVASG-------------- 119 (307)
T ss_pred ceeeeccccccccccccC---CCC--ceEEEEEcccCeeeeecccccceeeEEEecCcc-eEEEec--------------
Confidence 456677788888888722 333 5899999999996542 2223345678887555 454442
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
.....+..|+-.+...+.+.++.+..+ -+.++.. .+.-|+-.+.++ .+..+|+..|.
T Consensus 120 ----sfD~s~r~wDCRS~s~ePiQildea~D--~V~Si~v--~~heIvaGS~DG-----tvRtydiR~G~---------- 176 (307)
T KOG0316|consen 120 ----SFDSSVRLWDCRSRSFEPIQILDEAKD--GVSSIDV--AEHEIVAGSVDG-----TVRTYDIRKGT---------- 176 (307)
T ss_pred ----cccceeEEEEcccCCCCccchhhhhcC--ceeEEEe--cccEEEeeccCC-----cEEEEEeecce----------
Confidence 234568888887665555555544322 1234433 344444333222 24555655432
Q ss_pred CCCCcEEeeecccc-eE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEE
Q 004766 291 GLLPFVKLIDGFDA-QY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSY 367 (732)
Q Consensus 291 ~~~~~~~l~~~~~~-~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~ 367 (732)
+..++-. .+ ..+++||+-.+.-+ . +..|-++|-++++-.+....+.....=....+...+..++..
T Consensus 177 -------l~sDy~g~pit~vs~s~d~nc~La~~-l---~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sg 245 (307)
T KOG0316|consen 177 -------LSSDYFGHPITSVSFSKDGNCSLASS-L---DSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSG 245 (307)
T ss_pred -------eehhhcCCcceeEEecCCCCEEEEee-c---cceeeecccchhHHHHHhcccccceeeeeeeecccceeEEec
Confidence 2222111 11 24888888665433 2 335777887777622222233221111233444446788888
Q ss_pred ecCCeeEEEEEeCCCCceeeecccccce-eeEeecccCCc
Q 004766 368 LSDVKYVLQIRDLKNGSLLHQLPIEIGS-VNAISARREDS 406 (732)
Q Consensus 368 ~~~g~~~l~~~d~~~g~~~~~l~~~~g~-v~~~~~s~d~~ 406 (732)
+++| .+|.||+-++..+..+..+... +..++..|.-.
T Consensus 246 SEDG--~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~ 283 (307)
T KOG0316|consen 246 SEDG--KVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMD 283 (307)
T ss_pred cCCc--eEEEEEeccceeeeeeccCCceeEEeeecccCcc
Confidence 8985 7999999877665555544333 44555544433
No 266
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=97.81 E-value=0.00027 Score=71.31 Aligned_cols=222 Identities=10% Similarity=0.046 Sum_probs=122.8
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc---eecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI---VEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~---~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
+.+..+.|.|+||+|.-.++. |. ++| |+..+-. .++. ....+....||++|.+++-..
T Consensus 97 c~V~~v~WtPeGRRLltgs~S-GE--FtL--WNg~~fnFEtilQa--HDs~Vr~m~ws~~g~wmiSgD------------ 157 (464)
T KOG0284|consen 97 CPVNVVRWTPEGRRLLTGSQS-GE--FTL--WNGTSFNFETILQA--HDSPVRTMKWSHNGTWMISGD------------ 157 (464)
T ss_pred cceeeEEEcCCCceeEeeccc-cc--EEE--ecCceeeHHHHhhh--hcccceeEEEccCCCEEEEcC------------
Confidence 567889999999999877542 21 444 5542211 1111 111247899999998877542
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
....|.+|...-... ..+... +...+..+++||...-.+-.+.+ +.|.++|.....
T Consensus 158 -------~gG~iKyWqpnmnnV---k~~~ah-h~eaIRdlafSpnDskF~t~SdD-----g~ikiWdf~~~k-------- 213 (464)
T KOG0284|consen 158 -------KGGMIKYWQPNMNNV---KIIQAH-HAEAIRDLAFSPNDSKFLTCSDD-----GTIKIWDFRMPK-------- 213 (464)
T ss_pred -------CCceEEecccchhhh---HHhhHh-hhhhhheeccCCCCceeEEecCC-----CeEEEEeccCCc--------
Confidence 223466776543321 222211 11234578888844433333322 346666755421
Q ss_pred cCCCCCcEEeee-cccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEE
Q 004766 289 RDGLLPFVKLID-GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSY 367 (732)
Q Consensus 289 ~~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~ 367 (732)
+.+.|.. +++.....|.|.- .|++...++. -|-.+|.+++.++..|-.+. ..+-.+.|.+++..+++.
T Consensus 214 -----ee~vL~GHgwdVksvdWHP~k-gLiasgskDn---lVKlWDprSg~cl~tlh~HK--ntVl~~~f~~n~N~Llt~ 282 (464)
T KOG0284|consen 214 -----EERVLRGHGWDVKSVDWHPTK-GLIASGSKDN---LVKLWDPRSGSCLATLHGHK--NTVLAVKFNPNGNWLLTG 282 (464)
T ss_pred -----hhheeccCCCCcceeccCCcc-ceeEEccCCc---eeEeecCCCcchhhhhhhcc--ceEEEEEEcCCCCeeEEc
Confidence 1122322 4444444587754 4554444432 56678988887666565554 567788888766677777
Q ss_pred ecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEE
Q 004766 368 LSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVF 409 (732)
Q Consensus 368 ~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~ 409 (732)
.+| ..+.++|+.+-+.+.....+...+..+.+.|-...++
T Consensus 283 skD--~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lf 322 (464)
T KOG0284|consen 283 SKD--QSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLF 322 (464)
T ss_pred cCC--ceEEEEehhHhHHHHHhhcchhhheeeccccccccce
Confidence 777 4677888763333333333334455666666444443
No 267
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=97.81 E-value=0.0033 Score=62.60 Aligned_cols=235 Identities=13% Similarity=0.101 Sum_probs=137.0
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec-cc--ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DA--LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~-~~--~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
.+..+.+-|-..++| .|+...+|.|||+++|.... .+ +.. ..+++.|+-.-++|-+
T Consensus 153 WVr~vavdP~n~wf~-----tgs~DrtikIwDlatg~LkltltGhi~~--vr~vavS~rHpYlFs~-------------- 211 (460)
T KOG0285|consen 153 WVRSVAVDPGNEWFA-----TGSADRTIKIWDLATGQLKLTLTGHIET--VRGVAVSKRHPYLFSA-------------- 211 (460)
T ss_pred eEEEEeeCCCceeEE-----ecCCCceeEEEEcccCeEEEeecchhhe--eeeeeecccCceEEEe--------------
Confidence 366778899888877 34555799999999998532 22 222 3678999877666654
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
+...+|..|+|...+ +|-+--.+-.-+..++..|--..|+-.+ +. +.+.++|..+..
T Consensus 212 -----gedk~VKCwDLe~nk----vIR~YhGHlS~V~~L~lhPTldvl~t~g-rD----st~RvWDiRtr~--------- 268 (460)
T KOG0285|consen 212 -----GEDKQVKCWDLEYNK----VIRHYHGHLSGVYCLDLHPTLDVLVTGG-RD----STIRVWDIRTRA--------- 268 (460)
T ss_pred -----cCCCeeEEEechhhh----hHHHhccccceeEEEeccccceeEEecC-Cc----ceEEEeeecccc---------
Confidence 344579999997653 2211111112234556666655554332 22 335666776631
Q ss_pred CCCCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 290 DGLLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 290 ~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
++..+......... .+.|-...++-.+. ...|..+|+..++....++.+. ..+..+...+...++++..
T Consensus 269 ----~V~~l~GH~~~V~~V~~~~~dpqvit~S~----D~tvrlWDl~agkt~~tlt~hk--ksvral~lhP~e~~fASas 338 (460)
T KOG0285|consen 269 ----SVHVLSGHTNPVASVMCQPTDPQVITGSH----DSTVRLWDLRAGKTMITLTHHK--KSVRALCLHPKENLFASAS 338 (460)
T ss_pred ----eEEEecCCCCcceeEEeecCCCceEEecC----CceEEEeeeccCceeEeeeccc--ceeeEEecCCchhhhhccC
Confidence 12233222211111 13332233443222 3468888998887566677665 5667777777455666665
Q ss_pred cCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.| .|..|++..|+.+..+.....-+..++...|+ ++++- ..-..++.+|..+|
T Consensus 339 ~d---nik~w~~p~g~f~~nlsgh~~iintl~~nsD~--v~~~G---~dng~~~fwdwksg 391 (460)
T KOG0285|consen 339 PD---NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG--VLVSG---GDNGSIMFWDWKSG 391 (460)
T ss_pred Cc---cceeccCCccchhhccccccceeeeeeeccCc--eEEEc---CCceEEEEEecCcC
Confidence 55 58888987787666665555555556655554 44432 23467888888776
No 268
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.0055 Score=62.78 Aligned_cols=236 Identities=15% Similarity=0.089 Sum_probs=126.4
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
.++.|-|+.+.|.|+ +-.|. .|+.+|.++|+......... +++...-.++..|+ +....
T Consensus 28 EgP~w~~~~~~L~w~-DI~~~---~i~r~~~~~g~~~~~~~p~~-~~~~~~~d~~g~Lv-~~~~g--------------- 86 (307)
T COG3386 28 EGPVWDPDRGALLWV-DILGG---RIHRLDPETGKKRVFPSPGG-FSSGALIDAGGRLI-ACEHG--------------- 86 (307)
T ss_pred cCccCcCCCCEEEEE-eCCCC---eEEEecCCcCceEEEECCCC-cccceeecCCCeEE-EEccc---------------
Confidence 378899999988666 44443 78999998886433222221 24444443443443 33221
Q ss_pred CcccEEEEEECCCCCCCCeEEEecCCC-C-eeEEEeEEecCCcEEEEEEe-----cCC-cceEEEEEEeCCCCCCCcccc
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWKDPEH-P-KYIFSGHVTEDGQYLVMCIE-----ENC-DPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~~~~~-~-~~~~~~~~SpDg~~l~~~~~-----~~~-~~~~~l~~~d~~~~~~~~~~~ 286 (732)
+++++..++... .++.+..++ + .........|||+.-+-... ... .....||.++..+.
T Consensus 87 -----~~~~~~~~~~~~-t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~------- 153 (307)
T COG3386 87 -----VRLLDPDTGGKI-TLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGG------- 153 (307)
T ss_pred -----cEEEeccCCcee-EEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCC-------
Confidence 334443222210 122221111 0 11235667888876543332 111 12346888886442
Q ss_pred cccCCCCCcEEeeec-cc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCC--CC---Cc-eEeccCCCCCceeEEEEe
Q 004766 287 KKRDGLLPFVKLIDG-FD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE--PN---DW-FEVIPEAERDVLESATAV 358 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~-~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~--~~---~~-~~l~~~~~~~~l~~~~~~ 358 (732)
...+..+ .. ..-..|||||+.+|+.-. ...+|++++++. +. .. ...... +.....++.+.
T Consensus 154 --------~~~l~~~~~~~~NGla~SpDg~tly~aDT---~~~~i~r~~~d~~~g~~~~~~~~~~~~~-~~G~PDG~~vD 221 (307)
T COG3386 154 --------VVRLLDDDLTIPNGLAFSPDGKTLYVADT---PANRIHRYDLDPATGPIGGRRGFVDFDE-EPGLPDGMAVD 221 (307)
T ss_pred --------EEEeecCcEEecCceEECCCCCEEEEEeC---CCCeEEEEecCcccCccCCcceEEEccC-CCCCCCceEEe
Confidence 2233322 11 111259999998887533 346799988762 11 11 112222 12334567777
Q ss_pred cCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeec-ccCCcEEEEEEecCCCC
Q 004766 359 NLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISA-RREDSVVFISFTSFLIP 418 (732)
Q Consensus 359 ~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~-s~d~~~l~~~~ss~~~p 418 (732)
.++.+++....+| ..|.+++++ |+.+..+.+|...++...+ .++.++|+++.+....+
T Consensus 222 adG~lw~~a~~~g-~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~~~~~ 280 (307)
T COG3386 222 ADGNLWVAAVWGG-GRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITSARSGMS 280 (307)
T ss_pred CCCCEEEecccCC-ceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEEecCCCCC
Confidence 6566775444443 589999998 9888888888433333332 45678888887766554
No 269
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=97.79 E-value=0.002 Score=71.67 Aligned_cols=179 Identities=15% Similarity=0.034 Sum_probs=107.0
Q ss_pred EEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec-ccccceeeeeEEE
Q 004766 107 LYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWFKFSSIAW 185 (732)
Q Consensus 107 l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~-~~~~~~~~~~~~W 185 (732)
+.+-+-+.+++..+|+.-++ .+....++-+|+++|+. ++...|.+.++.++.... .......+.++.+
T Consensus 78 v~~y~fps~~~~~iL~Rftl------p~r~~~v~g~g~~iaag-----sdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~ 146 (933)
T KOG1274|consen 78 VLRYKFPSGEEDTILARFTL------PIRDLAVSGSGKMIAAG-----SDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSY 146 (933)
T ss_pred EEEeeCCCCCccceeeeeec------cceEEEEecCCcEEEee-----cCceeEEEEeccccchheeecccCCceeeeeE
Confidence 44444444555555554333 36688999999999966 455789999987765321 1112223578999
Q ss_pred EeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeE--EEe--cCCCCeeEEEeEEecCCcEEEEEE
Q 004766 186 THDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDIL--CWK--DPEHPKYIFSGHVTEDGQYLVMCI 261 (732)
Q Consensus 186 spDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~--v~~--~~~~~~~~~~~~~SpDg~~l~~~~ 261 (732)
.|.+..|+.+..++ +|+.|++.++.....+ +.. +.........++|+|+|..+++..
T Consensus 147 ~p~~~fLAvss~dG-------------------~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~ 207 (933)
T KOG1274|consen 147 DPKGNFLAVSSCDG-------------------KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPP 207 (933)
T ss_pred cCCCCEEEEEecCc-------------------eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeec
Confidence 99999999887554 6888888765321110 000 011122345789999977777765
Q ss_pred ecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccc---eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCC
Q 004766 262 EENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA---QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 337 (732)
Q Consensus 262 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 337 (732)
.++ .|-+++..+.. ..-.|...... ....|+|.|++|+-.+- +++|.++|.++.
T Consensus 208 ~d~-----~Vkvy~r~~we-------------~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~----~g~I~vWnv~t~ 264 (933)
T KOG1274|consen 208 VDN-----TVKVYSRKGWE-------------LQFKLRDKLSSSKFSDLQWSPNGKYIAASTL----DGQILVWNVDTH 264 (933)
T ss_pred cCC-----eEEEEccCCce-------------eheeecccccccceEEEEEcCCCcEEeeecc----CCcEEEEecccc
Confidence 543 36666665521 01122222111 23359999998875332 457889998753
No 270
>PRK04940 hypothetical protein; Provisional
Probab=97.77 E-value=0.00077 Score=62.33 Aligned_cols=119 Identities=8% Similarity=-0.051 Sum_probs=72.6
Q ss_pred CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCC
Q 004766 561 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWE 640 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~ 640 (732)
++++|+|.|+||+.+.+++.++- .+ +|+..|.+.+...+.--.+. ..+|. --.++..+.++ ++.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~~-aVLiNPAv~P~~~L~~~ig~--~~~y~-~~~~~h~~eL~-------~~~--- 123 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--IR-QVIFNPNLFPEENMEGKIDR--PEEYA-DIATKCVTNFR-------EKN--- 123 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--CC-EEEECCCCChHHHHHHHhCC--Ccchh-hhhHHHHHHhh-------hcC---
Confidence 46999999999999999999864 34 44566766654322111111 01111 12233333333 111
Q ss_pred CCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHH
Q 004766 641 QNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYG 720 (732)
Q Consensus 641 ~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~ 720 (732)
.-..+++....|...++.++.+.++ +. ....+.+|+.|.|..- .+....+.+
T Consensus 124 --------p~r~~vllq~gDEvLDyr~a~~~y~---------------~~-y~~~v~~GGdH~f~~f----e~~l~~I~~ 175 (180)
T PRK04940 124 --------RDRCLVILSRNDEVLDSQRTAEELH---------------PY-YEIVWDEEQTHKFKNI----SPHLQRIKA 175 (180)
T ss_pred --------cccEEEEEeCCCcccCHHHHHHHhc---------------cC-ceEEEECCCCCCCCCH----HHHHHHHHH
Confidence 2246888899999999888765542 21 2467889999999753 245567888
Q ss_pred HHH
Q 004766 721 FMA 723 (732)
Q Consensus 721 fl~ 723 (732)
|+.
T Consensus 176 F~~ 178 (180)
T PRK04940 176 FKT 178 (180)
T ss_pred HHh
Confidence 873
No 271
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.74 E-value=0.0009 Score=70.74 Aligned_cols=86 Identities=13% Similarity=0.014 Sum_probs=56.4
Q ss_pred hHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhh
Q 004766 502 SRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 502 ~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 581 (732)
+....|.. |+-|.+.|.+--+. .....+.-.++|++..+...++. +-++ +-++|.|+||.+++++++.
T Consensus 121 S~V~~Ll~-g~dVYl~DW~~p~~--------vp~~~~~f~ldDYi~~l~~~i~~--~G~~-v~l~GvCqgG~~~laa~Al 188 (406)
T TIGR01849 121 STVEALLP-DHDVYITDWVNARM--------VPLSAGKFDLEDYIDYLIEFIRF--LGPD-IHVIAVCQPAVPVLAAVAL 188 (406)
T ss_pred HHHHHHhC-CCcEEEEeCCCCCC--------CchhcCCCCHHHHHHHHHHHHHH--hCCC-CcEEEEchhhHHHHHHHHH
Confidence 34556663 99999999653221 01123455678887655544433 2344 9999999999998766664
Q ss_pred C-----CCeeeEEEEcCCccccc
Q 004766 582 R-----PDLFGCALAHVGVMDML 599 (732)
Q Consensus 582 ~-----p~~f~a~v~~~p~~d~~ 599 (732)
. |+..+.+++..+.+|..
T Consensus 189 ~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 189 MAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred HHhcCCCCCcceEEEEecCccCC
Confidence 3 56688888877777753
No 272
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.73 E-value=0.00018 Score=81.70 Aligned_cols=255 Identities=14% Similarity=0.060 Sum_probs=144.8
Q ss_pred eEEECCCCc-EEEEEEecc-------CCceEEEEEEECCCCc----eecccccceeeeeEEEEeCCcE---EEEEEecCC
Q 004766 136 KVSVSEDAK-YLAYALSYS-------GSDWATIKLMRIEDQI----VEADALSWFKFSSIAWTHDSKG---FFYSRYPAP 200 (732)
Q Consensus 136 ~~~~SPDG~-~la~~~~~~-------G~e~~~i~v~dl~~g~----~~~~~~~~~~~~~~~WspDg~~---l~y~~~~~~ 200 (732)
.++|||++. ++|-....+ -+...+|+..|..+.+ .........+|..++|++-|+. |+...
T Consensus 11 ~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG---- 86 (1049)
T KOG0307|consen 11 TFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGG---- 86 (1049)
T ss_pred eEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCccceeecc----
Confidence 678999996 444332111 1222467777776655 1211122336789999998876 34332
Q ss_pred CCCCCCCCCCcccCCcccEEEEEECCC--CCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 201 KEGKDMDAGTETDSNLYHEFYYHFLGT--KQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~v~~~~lgt--~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
..+..|-+|+... ......++.....+.+-+.++.|.+.+.-++.... ...+|++||+..
T Consensus 87 --------------~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa----~~geI~iWDlnn 148 (1049)
T KOG0307|consen 87 --------------LEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGA----DDGEILIWDLNK 148 (1049)
T ss_pred --------------ccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccC----CCCcEEEeccCC
Confidence 1223455665543 11122233333344556678899998884433321 146799999987
Q ss_pred CCCCcccccccCCCCCcEEeeecccceEEEEEec--CCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEE
Q 004766 279 LPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIAND--DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESAT 356 (732)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~d--g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~ 356 (732)
.. .+..........++..++.+ -.+++-. ...+++...+|++..+.+..+........+..+.
T Consensus 149 ~~------------tP~~~~~~~~~~eI~~lsWNrkvqhILAS---~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~ 213 (1049)
T KOG0307|consen 149 PE------------TPFTPGSQAPPSEIKCLSWNRKVSHILAS---GSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLA 213 (1049)
T ss_pred cC------------CCCCCCCCCCcccceEeccchhhhHHhhc---cCCCCCceeccccCCCcccccccCCCccceeeee
Confidence 32 11111111111223333332 2333322 2345578889998765344444443335678899
Q ss_pred EecC--CEEEEEEecCCeeEEEEEeCCCC-ceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 357 AVNL--NQMIVSYLSDVKYVLQIRDLKNG-SLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 357 ~~~~--~~l~~~~~~~g~~~l~~~d~~~g-~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
|.++ ..+++...++..+.|-+||+..- ..++.++.+...+-++++.+.+++++++.. .-.+++.++..+++
T Consensus 214 WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsg---kD~~ii~wN~~tgE 287 (1049)
T KOG0307|consen 214 WHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSG---KDNRIICWNPNTGE 287 (1049)
T ss_pred eCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhccc---CCCCeeEecCCCce
Confidence 9885 46888888888899999997522 233455555555557888887777766543 23578888988874
No 273
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=97.73 E-value=0.00088 Score=65.23 Aligned_cols=207 Identities=14% Similarity=0.118 Sum_probs=116.7
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCC------------Cc-----eec----ccccceeeeeEEEEeCCcEE
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED------------QI-----VEA----DALSWFKFSSIAWTHDSKGF 192 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~------------g~-----~~~----~~~~~~~~~~~~WspDg~~l 192 (732)
....+|||||.++| .|+....|.|+|++. |. ++- +..+ ....+.|.|-..-|
T Consensus 115 cR~aafs~DG~lvA-----TGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~d--evn~l~FHPre~IL 187 (430)
T KOG0640|consen 115 CRAAAFSPDGSLVA-----TGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVD--EVNDLDFHPRETIL 187 (430)
T ss_pred eeeeeeCCCCcEEE-----ccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccC--cccceeecchhheE
Confidence 34677999999988 556668999999871 11 000 1111 13567788876544
Q ss_pred EEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCC-CCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEE
Q 004766 193 FYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS-EDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKV 271 (732)
Q Consensus 193 ~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l 271 (732)
+-.+ +...|.+.+...... ..-.++++.. ...++++.|.|.+|++.... .-+
T Consensus 188 iS~s-------------------rD~tvKlFDfsK~saKrA~K~~qd~~---~vrsiSfHPsGefllvgTdH-----p~~ 240 (430)
T KOG0640|consen 188 ISGS-------------------RDNTVKLFDFSKTSAKRAFKVFQDTE---PVRSISFHPSGEFLLVGTDH-----PTL 240 (430)
T ss_pred Eecc-------------------CCCeEEEEecccHHHHHHHHHhhccc---eeeeEeecCCCceEEEecCC-----Cce
Confidence 4332 344677777753321 1222444332 34578999999999876532 236
Q ss_pred EEEeCCCCCCCcccccccCCCCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCC
Q 004766 272 YYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERD 350 (732)
Q Consensus 272 ~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 350 (732)
.++|+++-++-+.. .|-... .+.... .+++.| .+|+....++ .|-.+|--++.+++.+-..-.+.
T Consensus 241 rlYdv~T~Qcfvsa-------nPd~qh---t~ai~~V~Ys~t~-~lYvTaSkDG---~IklwDGVS~rCv~t~~~AH~gs 306 (430)
T KOG0640|consen 241 RLYDVNTYQCFVSA-------NPDDQH---TGAITQVRYSSTG-SLYVTASKDG---AIKLWDGVSNRCVRTIGNAHGGS 306 (430)
T ss_pred eEEeccceeEeeec-------Cccccc---ccceeEEEecCCc-cEEEEeccCC---cEEeeccccHHHHHHHHhhcCCc
Confidence 66677663211000 000000 001111 256654 5787766554 46666644443333332222245
Q ss_pred ceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecc
Q 004766 351 VLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP 390 (732)
Q Consensus 351 ~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~ 390 (732)
.+-+..++++++.++++..| +.+++|.+.+|..+.+-+
T Consensus 307 evcSa~Ftkn~kyiLsSG~D--S~vkLWEi~t~R~l~~Yt 344 (430)
T KOG0640|consen 307 EVCSAVFTKNGKYILSSGKD--STVKLWEISTGRMLKEYT 344 (430)
T ss_pred eeeeEEEccCCeEEeecCCc--ceeeeeeecCCceEEEEe
Confidence 67777788877777777766 678889988887655544
No 274
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=97.72 E-value=0.02 Score=64.15 Aligned_cols=237 Identities=12% Similarity=0.089 Sum_probs=138.0
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
...+.|-|||+.|. +.+.+ ..|++|+...-+..|+++........+.+-++..|+.++
T Consensus 16 ~t~i~~d~~gefi~-tcgsd----g~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s----------------- 73 (933)
T KOG1274|consen 16 LTLICYDPDGEFIC-TCGSD----GDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGS----------------- 73 (933)
T ss_pred eEEEEEcCCCCEEE-EecCC----CceEEeecCCcccCCchhhccCceeEEEeecccceEEee-----------------
Confidence 45788999999554 33322 468888765543345554421112233345566555543
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 293 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 293 (732)
....|.++.++++..+.+ +...+- .+..++++-+|+++++.+.+ ..|-++++.+..
T Consensus 74 --~~~tv~~y~fps~~~~~i-L~Rftl---p~r~~~v~g~g~~iaagsdD-----~~vK~~~~~D~s------------- 129 (933)
T KOG1274|consen 74 --EQNTVLRYKFPSGEEDTI-LARFTL---PIRDLAVSGSGKMIAAGSDD-----TAVKLLNLDDSS------------- 129 (933)
T ss_pred --ccceEEEeeCCCCCccce-eeeeec---cceEEEEecCCcEEEeecCc-----eeEEEEeccccc-------------
Confidence 234688999988876533 222211 13467899999999887643 447777776532
Q ss_pred CcEEeeecccceEE--EEEecCCeEEEEeCCCCCCceEEEEeCCCCC---CceEeccCCC---CCceeEEEEecC-CEEE
Q 004766 294 PFVKLIDGFDAQYE--VIANDDTVFTFLTNKDAPKYKIIRVDLKEPN---DWFEVIPEAE---RDVLESATAVNL-NQMI 364 (732)
Q Consensus 294 ~~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~---~~~~l~~~~~---~~~l~~~~~~~~-~~l~ 364 (732)
......+.+..+. .+.|.+..|+..+- +++|..+++.++. .+..+.+..+ ......++|.++ +.++
T Consensus 130 -~~~~lrgh~apVl~l~~~p~~~fLAvss~----dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la 204 (933)
T KOG1274|consen 130 -QEKVLRGHDAPVLQLSYDPKGNFLAVSSC----DGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLA 204 (933)
T ss_pred -hheeecccCCceeeeeEcCCCCEEEEEec----CceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEE
Confidence 1122233333332 36788877776543 4578899988775 2333333321 123456789885 5666
Q ss_pred EEEecCCeeEEEEEeCCCCceeeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 365 VSYLSDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 365 ~~~~~~g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+...++ .|.+++.++.+....+... ...+..++++|.|.+++.+ ..-..+.+||..+
T Consensus 205 ~~~~d~---~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs----~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 205 VPPVDN---TVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAAS----TLDGQILVWNVDT 263 (933)
T ss_pred eeccCC---eEEEEccCCceeheeecccccccceEEEEEcCCCcEEeee----ccCCcEEEEeccc
Confidence 665554 5778887766554444322 2226678899999876533 2345677777764
No 275
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=97.72 E-value=0.0076 Score=61.18 Aligned_cols=135 Identities=17% Similarity=0.082 Sum_probs=80.8
Q ss_pred CCCCeeEEEEEeCC--CCC-ceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECC--------C-
Q 004766 100 GLQPQSVLYVQDSL--DAK-AKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIE--------D- 167 (732)
Q Consensus 100 ~~~~~~~l~~r~~~--~~~-~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~--------~- 167 (732)
++..+-+||..... ++. ..|.+ ...|+ .+...+..++|||+|..||-. .+..++.+|-.. +
T Consensus 33 G~D~~iriW~v~r~~~~~~~~~V~y-~s~Ls-~H~~aVN~vRf~p~gelLASg-----~D~g~v~lWk~~~~~~~~~d~e 105 (434)
T KOG1009|consen 33 GGDKDIRIWKVNRSEPGGGDMKVEY-LSSLS-RHTRAVNVVRFSPDGELLASG-----GDGGEVFLWKQGDVRIFDADTE 105 (434)
T ss_pred cCccceeeeeeeecCCCCCceeEEE-eeccc-CCcceeEEEEEcCCcCeeeec-----CCCceEEEEEecCcCCccccch
Confidence 33445567765422 221 22222 23343 466789999999999999833 333566666543 3
Q ss_pred ----Cc-e-ec--ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecC
Q 004766 168 ----QI-V-EA--DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDP 239 (732)
Q Consensus 168 ----g~-~-~~--~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~ 239 (732)
.+ . +. ......+...++|+||+..+...+.+. .++.|++..++.. .+ ..
T Consensus 106 ~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dn-------------------s~~l~Dv~~G~l~--~~--~~ 162 (434)
T KOG1009|consen 106 ADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDN-------------------SVRLWDVHAGQLL--AI--LD 162 (434)
T ss_pred hhhCccceEEEEEecccccchhhhhccCCCceeeeeeccc-------------------eEEEEEeccceeE--ee--cc
Confidence 11 0 00 111112346799999999888876544 5788888877532 22 23
Q ss_pred CCCeeEEEeEEecCCcEEEEEEecC
Q 004766 240 EHPKYIFSGHVTEDGQYLVMCIEEN 264 (732)
Q Consensus 240 ~~~~~~~~~~~SpDg~~l~~~~~~~ 264 (732)
++..+...++|.|-+++++-.+.+.
T Consensus 163 dh~~yvqgvawDpl~qyv~s~s~dr 187 (434)
T KOG1009|consen 163 DHEHYVQGVAWDPLNQYVASKSSDR 187 (434)
T ss_pred ccccccceeecchhhhhhhhhccCc
Confidence 3445667899999999987665544
No 276
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=97.70 E-value=0.026 Score=53.34 Aligned_cols=240 Identities=15% Similarity=0.069 Sum_probs=132.6
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+..+++.-||+|.+-. |++ .+|++|+...|..+..-. .+-..-..+-+-|+..|+-.
T Consensus 19 aV~avryN~dGnY~ltc----Gsd-rtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~---------------- 77 (307)
T KOG0316|consen 19 AVRAVRYNVDGNYCLTC----GSD-RTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASC---------------- 77 (307)
T ss_pred ceEEEEEccCCCEEEEc----CCC-ceEEeecccccceeeeecCCCceeeeccccccccccccC----------------
Confidence 46788999999987643 555 689999999888664322 22223455666677777643
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
+....+++|++.|++... -|. .+...+..+.+..+..-++ +.+ ....+.++|-....
T Consensus 78 ---GgDk~v~vwDV~TGkv~R--r~r--gH~aqVNtV~fNeesSVv~-Sgs----fD~s~r~wDCRS~s----------- 134 (307)
T KOG0316|consen 78 ---GGDKAVQVWDVNTGKVDR--RFR--GHLAQVNTVRFNEESSVVA-SGS----FDSSVRLWDCRSRS----------- 134 (307)
T ss_pred ---CCCceEEEEEcccCeeee--ecc--cccceeeEEEecCcceEEE-ecc----ccceeEEEEcccCC-----------
Confidence 455679999999986432 122 2333445667766655443 322 23456677765421
Q ss_pred CCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 292 LLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
..|++.+-. ....+..+.-. ++.++.... .+.+-.+|+..+. +...--...+..+.+++++...+...-+
T Consensus 135 ~ePiQilde-a~D~V~Si~v~-~heIvaGS~---DGtvRtydiR~G~----l~sDy~g~pit~vs~s~d~nc~La~~l~- 204 (307)
T KOG0316|consen 135 FEPIQILDE-AKDGVSSIDVA-EHEIVAGSV---DGTVRTYDIRKGT----LSSDYFGHPITSVSFSKDGNCSLASSLD- 204 (307)
T ss_pred CCccchhhh-hcCceeEEEec-ccEEEeecc---CCcEEEEEeecce----eehhhcCCcceeEEecCCCCEEEEeecc-
Confidence 223333322 22223223222 334433332 3457777776664 2222224668889999876655555555
Q ss_pred eeEEEEEeCCCCceeeecccccceeeEeeccc-CCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 372 KYVLQIRDLKNGSLLHQLPIEIGSVNAISARR-EDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~-d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+.|+++|.++|+.++.-......-.-+.... .+.+.+++- ..-+.+|.||+...+
T Consensus 205 -stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sg---SEDG~Vy~wdLvd~~ 260 (307)
T KOG0316|consen 205 -STLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSG---SEDGKVYFWDLVDET 260 (307)
T ss_pred -ceeeecccchhHHHHHhcccccceeeeeeeecccceeEEec---cCCceEEEEEeccce
Confidence 5789999999987544432211111111111 122333332 234678888987653
No 277
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.69 E-value=0.0028 Score=65.98 Aligned_cols=231 Identities=18% Similarity=0.168 Sum_probs=137.0
Q ss_pred EEEEEEcCCCCCCCCccEEEEEcCCCCc---cCCCCcChhHHHHH-HhcCcEEEEE-cccCCC-------C-C------c
Q 004766 466 PMFIVSKKNIKLDGSHPCLLYGYGGFNI---SVTPSFSVSRTILM-RHLGAVFCIA-NIRGGG-------E-Y------G 526 (732)
Q Consensus 466 ~~~~~~p~~~~~~~~~P~vv~~hG~~~~---~~~~~~~~~~~~~l-~~~G~~v~~~-~~rG~g-------~-~------g 526 (732)
.+.|+.|++. ..+...+|++-||... ...+.+.......+ ..-|-+|+.. +++... . . +
T Consensus 51 ~l~I~vP~~~--~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iIA 128 (367)
T PF10142_consen 51 WLTIYVPKND--KNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAIIA 128 (367)
T ss_pred EEEEEECCCC--CCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHHH
Confidence 4567788872 3566789999998621 22223333333333 3345555543 333221 1 1 1
Q ss_pred hhHHhccc---ccCCc-----cHHHHHHHHHH-HHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEc-CCcc
Q 004766 527 EEWHKGGA---LAKKQ-----NCFDDFISASE-YLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH-VGVM 596 (732)
Q Consensus 527 ~~~~~~~~---~~~~~-----~~~~D~~~~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~-~p~~ 596 (732)
..|..-.. ..+-. ...--.+++++ ++.+....+.++.+|.|.|==|..+..++. .+.+.+|++.. .+++
T Consensus 129 ytW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~L 207 (367)
T PF10142_consen 129 YTWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVL 207 (367)
T ss_pred HHHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccC
Confidence 22444322 11100 01112222333 334444567889999999999988877777 46788877644 3555
Q ss_pred ccccccc---CCCCCcccc---cc---CCC---CCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCC
Q 004766 597 DMLRYHK---FTIGHAWVS---DF---GCS---EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVV 664 (732)
Q Consensus 597 d~~~~~~---~~~~~~~~~---~~---g~p---~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~ 664 (732)
|+...+. -..|..|-. .| |-. ..++..+.+.-.+|+...++ ...|-||+.|.+|+...
T Consensus 208 N~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~r----------L~~PK~ii~atgDeFf~ 277 (367)
T PF10142_consen 208 NMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDR----------LTMPKYIINATGDEFFV 277 (367)
T ss_pred CcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHh----------cCccEEEEecCCCceec
Confidence 5543221 011212211 11 211 34444445566799988877 57899999999999999
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 665 PLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 665 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
|..+.-++.+|. | +..+++.|+++|+... .+....+..|+...+.
T Consensus 278 pD~~~~y~d~L~------------G-~K~lr~vPN~~H~~~~-----~~~~~~l~~f~~~~~~ 322 (367)
T PF10142_consen 278 PDSSNFYYDKLP------------G-EKYLRYVPNAGHSLIG-----SDVVQSLRAFYNRIQN 322 (367)
T ss_pred cCchHHHHhhCC------------C-CeeEEeCCCCCcccch-----HHHHHHHHHHHHHHHc
Confidence 999999999987 4 5789999999999875 2445567888887653
No 278
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=97.69 E-value=0.0012 Score=62.37 Aligned_cols=222 Identities=12% Similarity=0.006 Sum_probs=123.5
Q ss_pred CCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCe
Q 004766 154 GSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDI 233 (732)
Q Consensus 154 G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~ 233 (732)
++..++-.|||.-+|..+-.....--....+|+.|.+.|+-..... -+.++++..+.+...
T Consensus 77 aaadftakvw~a~tgdelhsf~hkhivk~~af~~ds~~lltgg~ek-------------------llrvfdln~p~App~ 137 (334)
T KOG0278|consen 77 AAADFTAKVWDAVTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEK-------------------LLRVFDLNRPKAPPK 137 (334)
T ss_pred hcccchhhhhhhhhhhhhhhhhhhheeeeEEecccchhhhccchHH-------------------HhhhhhccCCCCCch
Confidence 3445788999998887653211111136789999999887643221 233344444332211
Q ss_pred EEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecC
Q 004766 234 LCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDD 313 (732)
Q Consensus 234 ~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg 313 (732)
+...+++-+..+-|-...+.|+-++.+ ..+.++|..++. ....|.........-+++||
T Consensus 138 ---E~~ghtg~Ir~v~wc~eD~~iLSSadd-----~tVRLWD~rTgt-------------~v~sL~~~s~VtSlEvs~dG 196 (334)
T KOG0278|consen 138 ---EISGHTGGIRTVLWCHEDKCILSSADD-----KTVRLWDHRTGT-------------EVQSLEFNSPVTSLEVSQDG 196 (334)
T ss_pred ---hhcCCCCcceeEEEeccCceEEeeccC-----CceEEEEeccCc-------------EEEEEecCCCCcceeeccCC
Confidence 111223334455565555665443222 347777877753 12233222222222367888
Q ss_pred CeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeec-ccc
Q 004766 314 TVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQL-PIE 392 (732)
Q Consensus 314 ~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l-~~~ 392 (732)
+.|.+. . ...|.-+|.++-...+. -.-...+++.++.++..+++...++ ..++.+|..+|+.+... ..+
T Consensus 197 ~ilTia-~----gssV~Fwdaksf~~lKs---~k~P~nV~SASL~P~k~~fVaGged--~~~~kfDy~TgeEi~~~nkgh 266 (334)
T KOG0278|consen 197 RILTIA-Y----GSSVKFWDAKSFGLLKS---YKMPCNVESASLHPKKEFFVAGGED--FKVYKFDYNTGEEIGSYNKGH 266 (334)
T ss_pred CEEEEe-c----CceeEEeccccccceee---ccCccccccccccCCCceEEecCcc--eEEEEEeccCCceeeecccCC
Confidence 765542 2 12466677665441111 1112457778888867788888777 57889999999875543 344
Q ss_pred cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 393 IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 393 ~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.|.|..+.++|||. ++ .|-..-+++..+.+..+
T Consensus 267 ~gpVhcVrFSPdGE-~y---AsGSEDGTirlWQt~~~ 299 (334)
T KOG0278|consen 267 FGPVHCVRFSPDGE-LY---ASGSEDGTIRLWQTTPG 299 (334)
T ss_pred CCceEEEEECCCCc-ee---eccCCCceEEEEEecCC
Confidence 77888899999986 32 23334455555554433
No 279
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=97.67 E-value=0.00028 Score=71.20 Aligned_cols=195 Identities=12% Similarity=0.084 Sum_probs=113.4
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
+..+.|+|+|++|+..+.-+ .+-+|+.-+-..+ ++.+.. +.-+..+.||++|.+++-
T Consensus 99 V~~v~WtPeGRRLltgs~SG-------------------EFtLWNg~~fnFE--tilQaH--Ds~Vr~m~ws~~g~wmiS 155 (464)
T KOG0284|consen 99 VNVVRWTPEGRRLLTGSQSG-------------------EFTLWNGTSFNFE--TILQAH--DSPVRTMKWSHNGTWMIS 155 (464)
T ss_pred eeeEEEcCCCceeEeecccc-------------------cEEEecCceeeHH--HHhhhh--cccceeEEEccCCCEEEE
Confidence 47799999999999876432 1233333111111 122222 234567899999999864
Q ss_pred EEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeec--ccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCC
Q 004766 260 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG--FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 337 (732)
Q Consensus 260 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 337 (732)
... . .-|-+++..-.. +...... ....-..|||....|+-.+++ +.|-++|..-+
T Consensus 156 gD~--g---G~iKyWqpnmnn--------------Vk~~~ahh~eaIRdlafSpnDskF~t~SdD----g~ikiWdf~~~ 212 (464)
T KOG0284|consen 156 GDK--G---GMIKYWQPNMNN--------------VKIIQAHHAEAIRDLAFSPNDSKFLTCSDD----GTIKIWDFRMP 212 (464)
T ss_pred cCC--C---ceEEecccchhh--------------hHHhhHhhhhhhheeccCCCCceeEEecCC----CeEEEEeccCC
Confidence 322 1 123444432200 0000001 111112488865555543332 35666776555
Q ss_pred CCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCC
Q 004766 338 NDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLI 417 (732)
Q Consensus 338 ~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~ 417 (732)
++-..|..+. ..+..+.|.+...++++..++. -|.+||..+|..+..+......|..+.++++++.|+ +.+- .
T Consensus 213 kee~vL~GHg--wdVksvdWHP~kgLiasgskDn--lVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Ll-t~sk-D- 285 (464)
T KOG0284|consen 213 KEERVLRGHG--WDVKSVDWHPTKGLIASGSKDN--LVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLL-TGSK-D- 285 (464)
T ss_pred chhheeccCC--CCcceeccCCccceeEEccCCc--eeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeE-EccC-C-
Confidence 4334454443 6788899998777888888885 789999999987666665667788888999997543 3333 2
Q ss_pred CceEEEEECCC
Q 004766 418 PGIVYQCNLKT 428 (732)
Q Consensus 418 p~~~y~~d~~~ 428 (732)
..+-.+|..+
T Consensus 286 -~~~kv~DiR~ 295 (464)
T KOG0284|consen 286 -QSCKVFDIRT 295 (464)
T ss_pred -ceEEEEehhH
Confidence 2556667654
No 280
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=97.67 E-value=0.0014 Score=67.75 Aligned_cols=228 Identities=16% Similarity=0.088 Sum_probs=123.9
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce-ecc----cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV-EAD----ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~-~~~----~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
.+....++|||+.|.. |.+..++-||||..-.+ +.. ....+ ..++-|||.+ ++|+..-.
T Consensus 467 yiRSckL~pdgrtLiv-----GGeastlsiWDLAapTprikaeltssapaC--yALa~spDak-vcFsccsd-------- 530 (705)
T KOG0639|consen 467 YIRSCKLLPDGRTLIV-----GGEASTLSIWDLAAPTPRIKAELTSSAPAC--YALAISPDAK-VCFSCCSD-------- 530 (705)
T ss_pred ceeeeEecCCCceEEe-----ccccceeeeeeccCCCcchhhhcCCcchhh--hhhhcCCccc-eeeeeccC--------
Confidence 3678899999999873 45678999999986542 221 11223 5678899997 55554321
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
..|.+|++... .+|-+...+..-...+.+|+||..|.-..- .+.+.-||+..+.
T Consensus 531 ----------GnI~vwDLhnq----~~VrqfqGhtDGascIdis~dGtklWTGGl-----DntvRcWDlregr------- 584 (705)
T KOG0639|consen 531 ----------GNIAVWDLHNQ----TLVRQFQGHTDGASCIDISKDGTKLWTGGL-----DNTVRCWDLREGR------- 584 (705)
T ss_pred ----------CcEEEEEcccc----eeeecccCCCCCceeEEecCCCceeecCCC-----ccceeehhhhhhh-------
Confidence 24788888643 244333333333457889999998853322 3457778887642
Q ss_pred ccCCCCCcEEee-ecccceEE--EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEE
Q 004766 288 KRDGLLPFVKLI-DGFDAQYE--VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMI 364 (732)
Q Consensus 288 ~~~~~~~~~~l~-~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~ 364 (732)
.+. .++...+. ..+|.++++++-- .+..+.+....++.. -.|-.++ ..+-++.+..-++.+
T Consensus 585 ---------qlqqhdF~SQIfSLg~cP~~dWlavGM----ens~vevlh~skp~k-yqlhlhe--ScVLSlKFa~cGkwf 648 (705)
T KOG0639|consen 585 ---------QLQQHDFSSQIFSLGYCPTGDWLAVGM----ENSNVEVLHTSKPEK-YQLHLHE--SCVLSLKFAYCGKWF 648 (705)
T ss_pred ---------hhhhhhhhhhheecccCCCccceeeec----ccCcEEEEecCCccc-eeecccc--cEEEEEEecccCcee
Confidence 111 12222221 2468888877532 234566666555542 2233332 345556665535666
Q ss_pred EEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEE
Q 004766 365 VSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQ 423 (732)
Q Consensus 365 ~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~ 423 (732)
++...|.. |-.|..--|..+-+.. +..+|.+-..|.|.+ ++++- |-..-.++|.
T Consensus 649 vStGkDnl--LnawrtPyGasiFqsk-E~SsVlsCDIS~ddk-yIVTG-SGdkkATVYe 702 (705)
T KOG0639|consen 649 VSTGKDNL--LNAWRTPYGASIFQSK-ESSSVLSCDISFDDK-YIVTG-SGDKKATVYE 702 (705)
T ss_pred eecCchhh--hhhccCccccceeecc-ccCcceeeeeccCce-EEEec-CCCcceEEEE
Confidence 66666643 3334433354322222 133444445566655 33333 3344455554
No 281
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.65 E-value=0.0035 Score=63.69 Aligned_cols=213 Identities=15% Similarity=0.181 Sum_probs=111.8
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
..+++|.|||++.+. +..- ...+-|+|++.++.+.+ ...+|. .-+-|.++ .|+-.+.++
T Consensus 98 ~~~~ls~dgk~~~V~-N~TP--a~SVtVVDl~~~kvv~ei~~PGC~-~iyP~~~~--~F~~lC~DG-------------- 157 (342)
T PF06433_consen 98 NMFALSADGKFLYVQ-NFTP--ATSVTVVDLAAKKVVGEIDTPGCW-LIYPSGNR--GFSMLCGDG-------------- 157 (342)
T ss_dssp GGEEE-TTSSEEEEE-EESS--SEEEEEEETTTTEEEEEEEGTSEE-EEEEEETT--EEEEEETTS--------------
T ss_pred cceEEccCCcEEEEE-ccCC--CCeEEEEECCCCceeeeecCCCEE-EEEecCCC--ceEEEecCC--------------
Confidence 357899999987655 3332 36899999999987653 345552 33344433 344444332
Q ss_pred CCcccEEEEEECCCCCCCC---eEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 214 SNLYHEFYYHFLGTKQSED---ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~---~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
.+....++...... ..+|...+++ .+..+.++.++.+++|.+.. ..+|-+|+.+.....
T Consensus 158 -----sl~~v~Ld~~Gk~~~~~t~~F~~~~dp-~f~~~~~~~~~~~~~F~Sy~-----G~v~~~dlsg~~~~~------- 219 (342)
T PF06433_consen 158 -----SLLTVTLDADGKEAQKSTKVFDPDDDP-LFEHPAYSRDGGRLYFVSYE-----GNVYSADLSGDSAKF------- 219 (342)
T ss_dssp -----CEEEEEETSTSSEEEEEEEESSTTTS--B-S--EEETTTTEEEEEBTT-----SEEEEEEETTSSEEE-------
T ss_pred -----ceEEEEECCCCCEeEeeccccCCCCcc-cccccceECCCCeEEEEecC-----CEEEEEeccCCcccc-------
Confidence 23334444222111 1233332323 34466778777777776543 458888887632110
Q ss_pred CCCCcEEeeec-ccceE-------EEEEecCCeEEEEeCCC------CCCceEEEEeCCCCCCceEeccCCCCCceeEEE
Q 004766 291 GLLPFVKLIDG-FDAQY-------EVIANDDTVFTFLTNKD------APKYKIIRVDLKEPNDWFEVIPEAERDVLESAT 356 (732)
Q Consensus 291 ~~~~~~~l~~~-~~~~~-------~~~s~dg~~l~~~s~~~------~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~ 356 (732)
..+|..++.. ....+ ..+.+..++||++.+.+ .+...||.+|+++++...++ +-. ..+.++.
T Consensus 220 -~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri-~l~--~~~~Si~ 295 (342)
T PF06433_consen 220 -GKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARI-PLE--HPIDSIA 295 (342)
T ss_dssp -EEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEE-EEE--EEESEEE
T ss_pred -cCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEE-eCC--CccceEE
Confidence 0112211111 01111 23555677888877532 23457999999998733333 211 3355788
Q ss_pred EecCCE-EEEEEecCCeeEEEEEeCCCCceeeecc
Q 004766 357 AVNLNQ-MIVSYLSDVKYVLQIRDLKNGSLLHQLP 390 (732)
Q Consensus 357 ~~~~~~-l~~~~~~~g~~~l~~~d~~~g~~~~~l~ 390 (732)
++.++. +++.... +...|+++|..+|+.++.+.
T Consensus 296 Vsqd~~P~L~~~~~-~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 296 VSQDDKPLLYALSA-GDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp EESSSS-EEEEEET-TTTEEEEEETTT--EEEEE-
T ss_pred EccCCCcEEEEEcC-CCCeEEEEeCcCCcEEeehh
Confidence 887544 4444333 23579999999998876665
No 282
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.63 E-value=0.033 Score=56.02 Aligned_cols=231 Identities=10% Similarity=-0.012 Sum_probs=114.3
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc-eecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI-VEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~-~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
+....+.-.|||||++|.-+.+.-.+.+..|-|||++.+- .+.+ ...+.....+.|.|||++|++.- -....-.+.+
T Consensus 49 gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVAN-GGI~Thpd~G 127 (305)
T PF07433_consen 49 GRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVAN-GGIETHPDSG 127 (305)
T ss_pred CCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEc-CCCccCcccC
Confidence 4444567889999998876665555556799999998443 3322 22333457899999999998763 1111001111
Q ss_pred CCCcc-cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcc--eEEEEEEeCCCCCCCcc
Q 004766 208 AGTET-DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDP--VNKVYYCDLSALPEGLE 284 (732)
Q Consensus 208 ~~~~~-~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~--~~~l~~~d~~~~~~~~~ 284 (732)
..++. +.-.++ |-+.+..++.--++..+...++..-+..+++++||.-++-....+... ..-+.+.+... . +.
T Consensus 128 R~kLNl~tM~ps-L~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~-~--~~ 203 (305)
T PF07433_consen 128 RAKLNLDTMQPS-LVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGG-A--LR 203 (305)
T ss_pred ceecChhhcCCc-eEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCC-c--ce
Confidence 11111 111233 445555554322211111112222345788999998776655544311 12233333221 0 00
Q ss_pred cccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEE
Q 004766 285 GFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMI 364 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~ 364 (732)
.+.. +........++-.++ .++.+|+.+++.+-+++ .+..+|.+++. +...++- ....++...+ +.++
T Consensus 204 ~~~~---p~~~~~~l~~Y~gSI-a~~~~g~~ia~tsPrGg---~~~~~d~~tg~-~~~~~~l---~D~cGva~~~-~~f~ 271 (305)
T PF07433_consen 204 LLPA---PEEQWRRLNGYIGSI-AADRDGRLIAVTSPRGG---RVAVWDAATGR-LLGSVPL---PDACGVAPTD-DGFL 271 (305)
T ss_pred eccC---ChHHHHhhCCceEEE-EEeCCCCEEEEECCCCC---EEEEEECCCCC-Eeecccc---CceeeeeecC-CceE
Confidence 0000 000001112232233 36778888887776643 57788888876 3333332 2244566555 3343
Q ss_pred EEEecCCeeEEEEEeC
Q 004766 365 VSYLSDVKYVLQIRDL 380 (732)
Q Consensus 365 ~~~~~~g~~~l~~~d~ 380 (732)
+++ |...+...+.
T Consensus 272 ~ss---G~G~~~~~~~ 284 (305)
T PF07433_consen 272 VSS---GQGQLIRLSP 284 (305)
T ss_pred EeC---CCccEEEccC
Confidence 332 3345555543
No 283
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.63 E-value=0.00021 Score=78.20 Aligned_cols=116 Identities=19% Similarity=0.116 Sum_probs=70.4
Q ss_pred ccEEEEEcCCCCccCC-CCcChhHHHHHHhcCcEEEEEcccCCCCCch---hHHhcccccCCccHHHHHHHHHHHHHHcC
Q 004766 481 HPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGGEYGE---EWHKGGALAKKQNCFDDFISASEYLISAG 556 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~---~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 556 (732)
.|++|++-|- +.... ......+..+..+.|..+++..+|=-|+.-. .-.+.-+...-...+.|+...++++..+-
T Consensus 29 gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 8999998443 32111 1112234566777899999999997443211 11111122233356889999999988653
Q ss_pred -CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccc
Q 004766 557 -YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 597 (732)
Q Consensus 557 -~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d 597 (732)
..+..+++++|+|+||.|++++-.++|++|.|+++.++++.
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 33556999999999999999999999999999998876553
No 284
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.62 E-value=0.0028 Score=59.64 Aligned_cols=184 Identities=18% Similarity=0.139 Sum_probs=109.4
Q ss_pred CccEEEEEcCCCCccCCCCcCh---hHHHHHHhcCcEEEEEcccC------C----C----------CCc-hhHHhccc-
Q 004766 480 SHPCLLYGYGGFNISVTPSFSV---SRTILMRHLGAVFCIANIRG------G----G----------EYG-EEWHKGGA- 534 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~---~~~~~l~~~G~~v~~~~~rG------~----g----------~~g-~~~~~~~~- 534 (732)
+.|-||.+||.-.+ ...|+. .+...|.+. +-++.++.+- . + +.. ..|.....
T Consensus 4 ~k~rvLcLHGfrQs--g~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~ 80 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQS--GKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEA 80 (230)
T ss_pred CCceEEEecchhhc--cHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccc
Confidence 45789999997554 345543 345556644 6666666551 0 1 111 34554433
Q ss_pred ccCCccHHHH-HHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC--CC------eeeEEEEcCCcccccccccCC
Q 004766 535 LAKKQNCFDD-FISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR--PD------LFGCALAHVGVMDMLRYHKFT 605 (732)
Q Consensus 535 ~~~~~~~~~D-~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~--p~------~f~a~v~~~p~~d~~~~~~~~ 605 (732)
.......++- +....+|++++|--| ||.|+|.|..|++.+++.. .. -|+-+|..+|+.-.
T Consensus 81 ~~~~~~~~eesl~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~------- 149 (230)
T KOG2551|consen 81 SFTEYFGFEESLEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFP------- 149 (230)
T ss_pred ccccccChHHHHHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCC-------
Confidence 2223333555 444566788888877 8999999999999998821 10 24555555554311
Q ss_pred CCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCC
Q 004766 606 IGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLEN 685 (732)
Q Consensus 606 ~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 685 (732)
+.+.+.. .+. . .+.+|.|-+-|+.|..||...+..+++....+
T Consensus 150 ---------~~~~~~~------~~~-----~----------~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a------- 192 (230)
T KOG2551|consen 150 ---------SKKLDES------AYK-----R----------PLSTPSLHIFGETDTIVPSERSEQLAESFKDA------- 192 (230)
T ss_pred ---------cchhhhh------hhc-----c----------CCCCCeeEEecccceeecchHHHHHHHhcCCC-------
Confidence 0001100 011 1 27889999999999999999999998876531
Q ss_pred CCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 686 SPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 686 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
. ++.-.+||.+-.... ....+.+|+...+
T Consensus 193 -------~-vl~HpggH~VP~~~~----~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 193 -------T-VLEHPGGHIVPNKAK----YKEKIADFIQSFL 221 (230)
T ss_pred -------e-EEecCCCccCCCchH----HHHHHHHHHHHHH
Confidence 3 333467999866443 2234555665544
No 285
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=97.61 E-value=0.00067 Score=71.99 Aligned_cols=120 Identities=11% Similarity=0.030 Sum_probs=74.6
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee---cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE---ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~---~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
+.-.|..++|.|=-.-++.+. +...+|.+||+.++... ....+ .+.+++|||||+.++-+..+.
T Consensus 676 h~eKI~slRfHPLAadvLa~a----syd~Ti~lWDl~~~~~~~~l~gHtd--qIf~~AWSpdGr~~AtVcKDg------- 742 (1012)
T KOG1445|consen 676 HGEKITSLRFHPLAADVLAVA----SYDSTIELWDLANAKLYSRLVGHTD--QIFGIAWSPDGRRIATVCKDG------- 742 (1012)
T ss_pred ccceEEEEEecchhhhHhhhh----hccceeeeeehhhhhhhheeccCcC--ceeEEEECCCCcceeeeecCc-------
Confidence 445677888988443322222 33479999999988732 22222 247899999999999987654
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCC-eeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHP-KYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
+|++|+-.+++ ..|+++..-- .....+.|-=||++|+++.-+..+ ..+|-+++.++
T Consensus 743 ------------~~rVy~Prs~e---~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~S-eRQv~~Y~Aq~ 799 (1012)
T KOG1445|consen 743 ------------TLRVYEPRSRE---QPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSS-ERQVQMYDAQT 799 (1012)
T ss_pred ------------eEEEeCCCCCC---CccccCCCCccCcceeEEEEecCcEEEEecccccc-hhhhhhhhhhh
Confidence 46666544332 2455443210 112357788899999887755442 45566777655
No 286
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=97.60 E-value=0.02 Score=61.85 Aligned_cols=231 Identities=12% Similarity=0.119 Sum_probs=126.6
Q ss_pred cccEEEEEECCCCCCC------CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 216 LYHEFYYHFLGTKQSE------DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 216 ~~~~v~~~~lgt~~~~------~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
..+.+..|.+|+...+ .++-+..++ ...+...+.||||.+|++..-. ...||.+..+. .
T Consensus 351 ~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~-~~nIs~~aiSPdg~~Ia~st~~----~~~iy~L~~~~-~--------- 415 (691)
T KOG2048|consen 351 KAHGVDLWRLGSVILQGEYNYIHLLKLFTKE-KENISCAAISPDGNLIAISTVS----RTKIYRLQPDP-N--------- 415 (691)
T ss_pred ccccccceeccCcccccccChhhheeeecCC-ccceeeeccCCCCCEEEEeecc----ceEEEEeccCc-c---------
Confidence 3445667778876221 222222222 3456678899999999987632 24455554332 1
Q ss_pred CCCCCcEEeeec----ccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC--CceEeccCCCCCceeEEEEecC-CE
Q 004766 290 DGLLPFVKLIDG----FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN--DWFEVIPEAERDVLESATAVNL-NQ 362 (732)
Q Consensus 290 ~~~~~~~~l~~~----~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~l~~~~~~~~-~~ 362 (732)
...+.+-.. .+.....++-|++.+++.+.. .+.|..++++++. ....+.+......+..+..+++ ++
T Consensus 416 ---vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~---~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~y 489 (691)
T KOG2048|consen 416 ---VKVINVDDVPLALLDASAISFTIDKNKLFLVSKN---IFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNY 489 (691)
T ss_pred ---eeEEEeccchhhhccceeeEEEecCceEEEEecc---cceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCE
Confidence 001111110 111223477788888877732 4568888887765 2223333322345666677764 56
Q ss_pred EEEEEecCCeeEEEEEeCCCCceeeecc-cccceeeEeecc-cCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEeec
Q 004766 363 MIVSYLSDVKYVLQIRDLKNGSLLHQLP-IEIGSVNAISAR-REDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETI 440 (732)
Q Consensus 363 l~~~~~~~g~~~l~~~d~~~g~~~~~l~-~~~g~v~~~~~s-~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~ 440 (732)
+.+.. +.+.|++|++++++. +.+. .....+..+.++ ++.+.+.+.+++ .++|.+|+...+ .+.+..
T Consensus 490 iaa~~---t~g~I~v~nl~~~~~-~~l~~rln~~vTa~~~~~~~~~~lvvats~----nQv~efdi~~~~--l~~ws~-- 557 (691)
T KOG2048|consen 490 IAAIS---TRGQIFVYNLETLES-HLLKVRLNIDVTAAAFSPFVRNRLVVATSN----NQVFEFDIEARN--LTRWSK-- 557 (691)
T ss_pred EEEEe---ccceEEEEEccccee-ecchhccCcceeeeeccccccCcEEEEecC----CeEEEEecchhh--hhhhhh--
Confidence 66655 345899999986664 4443 233445455555 455677777665 589999985442 222221
Q ss_pred CCCCCCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCcc
Q 004766 441 IPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNIS 494 (732)
Q Consensus 441 ~~~~~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~ 494 (732)
.+... ....+.+..+ .+++..+-| ++|..+.+|++...+
T Consensus 558 ---~nt~n---lpk~~~~l~~--~~~gisfd~-------~n~s~~~~~~a~w~~ 596 (691)
T KOG2048|consen 558 ---NNTRN---LPKEPKTLIP--GIPGISFDP-------KNSSRFIVYDAHWSC 596 (691)
T ss_pred ---ccccc---cccChhhcCC--CCceEEeCC-------CCccEEEEEcCcEEE
Confidence 01111 1122334343 566666643 568889999986654
No 287
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.59 E-value=0.0087 Score=60.04 Aligned_cols=120 Identities=13% Similarity=0.055 Sum_probs=70.0
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
.+..+++||||+.+|++.... ....|++....+...... .+.....++|++||. +++.....
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~--~~~~L~~~~~~~~~~~~~--~g~~l~~PS~d~~g~-~W~v~~~~------------- 86 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGD--GGRSLYVGPAGGPVRPVL--TGGSLTRPSWDPDGW-VWTVDDGS------------- 86 (253)
T ss_pred cccceEECCCCCeEEEEEEcC--CCCEEEEEcCCCcceeec--cCCccccccccCCCC-EEEEEcCC-------------
Confidence 456899999999999998333 336899887654433222 222458899999975 44443211
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS 277 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 277 (732)
....+.+ +..++....+.+ ..+....-+..+.+||||.++++...... ..+|++.-+.
T Consensus 87 ---~~~~~~~-~~~~g~~~~~~v-~~~~~~~~I~~l~vSpDG~RvA~v~~~~~--~~~v~va~V~ 144 (253)
T PF10647_consen 87 ---GGVRVVR-DSASGTGEPVEV-DWPGLRGRITALRVSPDGTRVAVVVEDGG--GGRVYVAGVV 144 (253)
T ss_pred ---CceEEEE-ecCCCcceeEEe-cccccCCceEEEEECCCCcEEEEEEecCC--CCeEEEEEEE
Confidence 1112222 212222221111 22211114568999999999999987655 3567776543
No 288
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.57 E-value=0.0019 Score=58.54 Aligned_cols=122 Identities=16% Similarity=0.066 Sum_probs=81.7
Q ss_pred ccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCcccccc
Q 004766 535 LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDF 614 (732)
Q Consensus 535 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~ 614 (732)
.++....++|-++.++.-+..- ++-+.+++||.|+.+++..+.+.-...+++++.+|+- +-+-. .+
T Consensus 36 ~~w~~P~~~dWi~~l~~~v~a~---~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd-~~~~~------~~---- 101 (181)
T COG3545 36 DDWEAPVLDDWIARLEKEVNAA---EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPD-VSRPE------IR---- 101 (181)
T ss_pred CCCCCCCHHHHHHHHHHHHhcc---CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCC-ccccc------cc----
Confidence 3455667888888877665542 4559999999999999999987555677777776642 11100 00
Q ss_pred CCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEE
Q 004766 615 GCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIG 694 (732)
Q Consensus 615 g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 694 (732)
+ ..+..++|+...+. -=|.+++++.||+.|+++++..+++++-. .|
T Consensus 102 -----~---~~~~tf~~~p~~~l-----------pfps~vvaSrnDp~~~~~~a~~~a~~wgs---------------~l 147 (181)
T COG3545 102 -----P---KHLMTFDPIPREPL-----------PFPSVVVASRNDPYVSYEHAEDLANAWGS---------------AL 147 (181)
T ss_pred -----h---hhccccCCCccccC-----------CCceeEEEecCCCCCCHHHHHHHHHhccH---------------hh
Confidence 0 11233445433322 22788999999999999999999988764 44
Q ss_pred EEeCCCCCCC
Q 004766 695 RIERKAGHGV 704 (732)
Q Consensus 695 ~~~~~~gH~~ 704 (732)
+....+||..
T Consensus 148 v~~g~~GHiN 157 (181)
T COG3545 148 VDVGEGGHIN 157 (181)
T ss_pred eecccccccc
Confidence 5556778864
No 289
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=97.56 E-value=0.12 Score=56.12 Aligned_cols=240 Identities=15% Similarity=0.128 Sum_probs=133.5
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc---cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL---SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~---~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
+..+++|.+.+.||.+.. ...|-+|++..+-.+...+ ++....+++|+ +|.+|+-+.
T Consensus 28 I~slA~s~kS~~lAvsRt-----~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g-------------- 87 (691)
T KOG2048|consen 28 IVSLAYSHKSNQLAVSRT-----DGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSG-------------- 87 (691)
T ss_pred eEEEEEeccCCceeeecc-----CCcEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeec--------------
Confidence 447889999999997753 2478889998765332222 22235789999 555676542
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
....|-.||+.+... ++.-....+-+.+++.+|.+..+++...++ -++..+...+.
T Consensus 88 -----~sg~i~EwDl~~lk~----~~~~d~~gg~IWsiai~p~~~~l~IgcddG-----vl~~~s~~p~~---------- 143 (691)
T KOG2048|consen 88 -----LSGSITEWDLHTLKQ----KYNIDSNGGAIWSIAINPENTILAIGCDDG-----VLYDFSIGPDK---------- 143 (691)
T ss_pred -----CCceEEEEecccCce----eEEecCCCcceeEEEeCCccceEEeecCCc-----eEEEEecCCce----------
Confidence 334678888876542 222222234456788889998887765332 35555443311
Q ss_pred CCCCcEEeeecccceE-E-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEec------cCCCCCceeEEEEecCCE
Q 004766 291 GLLPFVKLIDGFDAQY-E-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVI------PEAERDVLESATAVNLNQ 362 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~~-~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~------~~~~~~~l~~~~~~~~~~ 362 (732)
.........-.... . .|.+++.+++.-+ ..+.|-.+|+..+.....+. ...+...+=++.+.. +.
T Consensus 144 --I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs----~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lr-d~ 216 (691)
T KOG2048|consen 144 --ITYKRSLMRQKSRVLSLSWNPTGTKIAGGS----IDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLR-DS 216 (691)
T ss_pred --EEEEeecccccceEEEEEecCCccEEEecc----cCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEee-cC
Confidence 01111111111111 1 4778887776422 24567778887765222110 111112222333334 33
Q ss_pred EEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 363 MIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 363 l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.++..... +.+..||.+.|...+........|-.++.+.++++++.+- . -+.+..|...+.+
T Consensus 217 tI~sgDS~--G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaG---v-d~~ii~~~~~~~~ 278 (691)
T KOG2048|consen 217 TIASGDSA--GTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAG---V-DPKIIQYSLTTNK 278 (691)
T ss_pred cEEEecCC--ceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEcc---C-CCceEEEEecCCc
Confidence 44454433 5788999988876555555566677777777777765432 2 2456677666553
No 290
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.56 E-value=0.13 Score=62.42 Aligned_cols=255 Identities=7% Similarity=-0.016 Sum_probs=129.6
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc---c--------ce---eeeeEEEEeCCcEEEEEEecCC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL---S--------WF---KFSSIAWTHDSKGFFYSRYPAP 200 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~---~--------~~---~~~~~~WspDg~~l~y~~~~~~ 200 (732)
+++.+++++..|. +.+.+. ..|+++|+.+........ . .+ ...++++.+++..||++-
T Consensus 571 ~gvavd~~~g~ly-VaDs~n---~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaD---- 642 (1057)
T PLN02919 571 GKLAIDLLNNRLF-ISDSNH---NRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVAD---- 642 (1057)
T ss_pred ceEEEECCCCeEE-EEECCC---CeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEe----
Confidence 4678888766554 445433 478899986543221110 0 00 136789999887776652
Q ss_pred CCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEe---------cCC----C-CeeEEEeEEecCCcEEEEEEecCCc
Q 004766 201 KEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWK---------DPE----H-PKYIFSGHVTEDGQYLVMCIEENCD 266 (732)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~---------~~~----~-~~~~~~~~~SpDg~~l~~~~~~~~~ 266 (732)
...+.|.++++.++... .+.. +.. . -..-.+++++|++..|++....
T Consensus 643 --------------t~n~~Ir~id~~~~~V~--tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~--- 703 (1057)
T PLN02919 643 --------------TENHALREIDFVNETVR--TLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAG--- 703 (1057)
T ss_pred --------------CCCceEEEEecCCCEEE--EEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECC---
Confidence 12345666665443211 1110 000 0 0011367899977777665422
Q ss_pred ceEEEEEEeCCCCCCCcccccccCCCCCc---EEeeeccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceE
Q 004766 267 PVNKVYYCDLSALPEGLEGFKKRDGLLPF---VKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFE 342 (732)
Q Consensus 267 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~---~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 342 (732)
+..|++++..++... .+..++..... ......+. ..-..++|+|+.||+... .+.+|.++|++++. ...
T Consensus 704 -~~~I~v~d~~~g~v~--~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs---~n~~Irv~D~~tg~-~~~ 776 (1057)
T PLN02919 704 -QHQIWEYNISDGVTR--VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADS---ESSSIRALDLKTGG-SRL 776 (1057)
T ss_pred -CCeEEEEECCCCeEE--EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEEC---CCCeEEEEECCCCc-EEE
Confidence 356888887653210 00000000000 00000000 111247899988886433 24579999988765 122
Q ss_pred eccCCC--------------------CCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeeccc-c-c-------
Q 004766 343 VIPEAE--------------------RDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI-E-I------- 393 (732)
Q Consensus 343 l~~~~~--------------------~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~-~-~------- 393 (732)
+..... -..-.++.+.+++.+|++...+ .+|.++|.+++.. ..+.. . .
T Consensus 777 ~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N--~rIrviD~~tg~v-~tiaG~G~~G~~dG~~ 853 (1057)
T PLN02919 777 LAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYN--HKIKKLDPATKRV-TTLAGTGKAGFKDGKA 853 (1057)
T ss_pred EEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCC--CEEEEEECCCCeE-EEEeccCCcCCCCCcc
Confidence 211000 0012356677666787776555 6899999876654 33221 0 0
Q ss_pred -----ceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 394 -----GSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 394 -----g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
....++..+++|. ++++- ..-.++..+|+.+++
T Consensus 854 ~~a~l~~P~GIavd~dG~-lyVaD---t~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 854 LKAQLSEPAGLALGENGR-LFVAD---TNNSLIRYLDLNKGE 891 (1057)
T ss_pred cccccCCceEEEEeCCCC-EEEEE---CCCCEEEEEECCCCc
Confidence 1233556677775 55442 233578889988875
No 291
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.56 E-value=0.00029 Score=56.20 Aligned_cols=76 Identities=17% Similarity=0.170 Sum_probs=52.1
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHH
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCF 542 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~ 542 (732)
++|.+..+.|++ .+..+|+++||....+. .|. .+...|+++||.|+..|.||.|... + .....+.+
T Consensus 2 ~~L~~~~w~p~~----~~k~~v~i~HG~~eh~~--ry~-~~a~~L~~~G~~V~~~D~rGhG~S~------g-~rg~~~~~ 67 (79)
T PF12146_consen 2 TKLFYRRWKPEN----PPKAVVVIVHGFGEHSG--RYA-HLAEFLAEQGYAVFAYDHRGHGRSE------G-KRGHIDSF 67 (79)
T ss_pred cEEEEEEecCCC----CCCEEEEEeCCcHHHHH--HHH-HHHHHHHhCCCEEEEECCCcCCCCC------C-cccccCCH
Confidence 678888887765 26889999999754432 344 3456677799999999999999754 1 12223456
Q ss_pred HHHHHHHHHH
Q 004766 543 DDFISASEYL 552 (732)
Q Consensus 543 ~D~~~~~~~l 552 (732)
+++++-+..+
T Consensus 68 ~~~v~D~~~~ 77 (79)
T PF12146_consen 68 DDYVDDLHQF 77 (79)
T ss_pred HHHHHHHHHH
Confidence 6666655544
No 292
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=97.54 E-value=0.044 Score=51.18 Aligned_cols=230 Identities=12% Similarity=0.063 Sum_probs=113.9
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEE----ECCCCceec----------ccccceeeeeEEEEeCCcEEEEEEec
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLM----RIEDQIVEA----------DALSWFKFSSIAWTHDSKGFFYSRYP 198 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~----dl~~g~~~~----------~~~~~~~~~~~~WspDg~~l~y~~~~ 198 (732)
.+..+.|.|.|.+.|..++ +....|.-+ |+..+...+ ..-....+...+|||+|..|+-.+++
T Consensus 34 airav~fhp~g~lyavgsn---skt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsnd 110 (350)
T KOG0641|consen 34 AIRAVAFHPAGGLYAVGSN---SKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSND 110 (350)
T ss_pred heeeEEecCCCceEEeccC---CceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCC
Confidence 4668999999998876642 333444332 343332111 00111124678999999988766543
Q ss_pred CCCCCCCCCCCCcccCCcccEEEEEECCCCCCCC-eEEEecCCCCeeEEEeEE---ecCCcEEEEEEecCCcceEEEEEE
Q 004766 199 APKEGKDMDAGTETDSNLYHEFYYHFLGTKQSED-ILCWKDPEHPKYIFSGHV---TEDGQYLVMCIEENCDPVNKVYYC 274 (732)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-~~v~~~~~~~~~~~~~~~---SpDg~~l~~~~~~~~~~~~~l~~~ 274 (732)
. .-++...+..|.+... .+-|.- +++-+..++| +..|..|+.+...+ .-.||+.
T Consensus 111 k-----------------~ik~l~fn~dt~~~~g~dle~nm--hdgtirdl~fld~~~s~~~il~s~gag---dc~iy~t 168 (350)
T KOG0641|consen 111 K-----------------TIKVLPFNADTCNATGHDLEFNM--HDGTIRDLAFLDDPESGGAILASAGAG---DCKIYIT 168 (350)
T ss_pred c-----------------eEEEEecccccccccCcceeeee--cCCceeeeEEecCCCcCceEEEecCCC---cceEEEe
Confidence 3 1123333333322110 011111 1122233333 23445555544332 4679998
Q ss_pred eCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC-----CC
Q 004766 275 DLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-----ER 349 (732)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~-----~~ 349 (732)
|-..+. ++..+..........++.+|-.+. +.. ....|-.+|+.-+....+|-... +.
T Consensus 169 dc~~g~-------------~~~a~sghtghilalyswn~~m~~--sgs--qdktirfwdlrv~~~v~~l~~~~~~~gles 231 (350)
T KOG0641|consen 169 DCGRGQ-------------GFHALSGHTGHILALYSWNGAMFA--SGS--QDKTIRFWDLRVNSCVNTLDNDFHDGGLES 231 (350)
T ss_pred ecCCCC-------------cceeecCCcccEEEEEEecCcEEE--ccC--CCceEEEEeeeccceeeeccCcccCCCccc
Confidence 876642 244444322222233444443322 221 22345556665443222221111 12
Q ss_pred CceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCc
Q 004766 350 DVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDS 406 (732)
Q Consensus 350 ~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~ 406 (732)
..+..+.+.+.++|+++...+. .-.++|+..|..+++.......+..+.++|..-
T Consensus 232 savaav~vdpsgrll~sg~~ds--sc~lydirg~r~iq~f~phsadir~vrfsp~a~ 286 (350)
T KOG0641|consen 232 SAVAAVAVDPSGRLLASGHADS--SCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAH 286 (350)
T ss_pred ceeEEEEECCCcceeeeccCCC--ceEEEEeeCCceeeeeCCCccceeEEEeCCCce
Confidence 3456677777688988887774 455678876666566654455566677777543
No 293
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=97.52 E-value=0.026 Score=57.93 Aligned_cols=161 Identities=16% Similarity=0.181 Sum_probs=101.2
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc---ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA---LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~---~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
+...+..|.|.|+..+.++ .++-..|+.+|..+... ...+.+.+.++.||| ++|...
T Consensus 306 V~~ls~h~tgeYllsAs~d-----~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDg--Lifgtg------------- 365 (506)
T KOG0289|consen 306 VTGLSLHPTGEYLLSASND-----GTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDG--LIFGTG------------- 365 (506)
T ss_pred ceeeeeccCCcEEEEecCC-----ceEEEEEccCCcEEEEEeeccccceeEEeeEcCCc--eEEecc-------------
Confidence 6788899999999877532 46677889999865422 223457899999998 444431
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
.....|..|++.++. .+.-| +.+.+-+..++||.+|=||+....++. +.++|+....
T Consensus 366 ----t~d~~vkiwdlks~~--~~a~F--pght~~vk~i~FsENGY~Lat~add~~-----V~lwDLRKl~---------- 422 (506)
T KOG0289|consen 366 ----TPDGVVKIWDLKSQT--NVAKF--PGHTGPVKAISFSENGYWLATAADDGS-----VKLWDLRKLK---------- 422 (506)
T ss_pred ----CCCceEEEEEcCCcc--ccccC--CCCCCceeEEEeccCceEEEEEecCCe-----EEEEEehhhc----------
Confidence 123468888887653 22223 334445678999999999988775432 8888987622
Q ss_pred CCCCcEEeee--cccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEecc
Q 004766 291 GLLPFVKLID--GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIP 345 (732)
Q Consensus 291 ~~~~~~~l~~--~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~ 345 (732)
.++.+.- ........|...|..|.+. +...+||.++-.+.. |+.+..
T Consensus 423 ---n~kt~~l~~~~~v~s~~fD~SGt~L~~~----g~~l~Vy~~~k~~k~-W~~~~~ 471 (506)
T KOG0289|consen 423 ---NFKTIQLDEKKEVNSLSFDQSGTYLGIA----GSDLQVYICKKKTKS-WTEIKE 471 (506)
T ss_pred ---ccceeeccccccceeEEEcCCCCeEEee----cceeEEEEEeccccc-ceeeeh
Confidence 1222221 1111122366667776654 345678888755554 776643
No 294
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.52 E-value=0.056 Score=54.46 Aligned_cols=212 Identities=14% Similarity=0.110 Sum_probs=123.1
Q ss_pred eeEEEEe-CCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 181 SSIAWTH-DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 181 ~~~~Wsp-Dg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
.+++.+| ++..++|.+.+. ..+++++..++... .....+++.-|.-...||+||++|+.
T Consensus 8 H~~a~~p~~~~avafaRRPG------------------~~~~v~D~~~g~~~--~~~~a~~gRHFyGHg~fs~dG~~Lyt 67 (305)
T PF07433_consen 8 HGVAAHPTRPEAVAFARRPG------------------TFALVFDCRTGQLL--QRLWAPPGRHFYGHGVFSPDGRLLYT 67 (305)
T ss_pred cceeeCCCCCeEEEEEeCCC------------------cEEEEEEcCCCcee--eEEcCCCCCEEecCEEEcCCCCEEEE
Confidence 6788899 566777776554 23667777666433 23333444456667889999999987
Q ss_pred EEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-cccceEEEEEecCCeEEEEeCC---------------C
Q 004766 260 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDAQYEVIANDDTVFTFLTNK---------------D 323 (732)
Q Consensus 260 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~s~~---------------~ 323 (732)
+-++-.+....|-++|.+.+- ........ +.+.--..+.|||+.|++ .|- +
T Consensus 68 TEnd~~~g~G~IgVyd~~~~~------------~ri~E~~s~GIGPHel~l~pDG~tLvV-ANGGI~Thpd~GR~kLNl~ 134 (305)
T PF07433_consen 68 TENDYETGRGVIGVYDAARGY------------RRIGEFPSHGIGPHELLLMPDGETLVV-ANGGIETHPDSGRAKLNLD 134 (305)
T ss_pred eccccCCCcEEEEEEECcCCc------------EEEeEecCCCcChhhEEEcCCCCEEEE-EcCCCccCcccCceecChh
Confidence 766655556778889987321 00111111 111111247889887775 331 1
Q ss_pred CCCceEEEEeCCCCCCceE--eccCCCCCceeEEEEecCCEEEEEEecCCe-----eEEEEEeCCCCceeeecccc----
Q 004766 324 APKYKIIRVDLKEPNDWFE--VIPEAERDVLESATAVNLNQMIVSYLSDVK-----YVLQIRDLKNGSLLHQLPIE---- 392 (732)
Q Consensus 324 ~~~~~l~~~d~~~~~~~~~--l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~-----~~l~~~d~~~g~~~~~l~~~---- 392 (732)
.....|..+|..+++-... |-+......|.-+.+.+++.+++.....+. +-|.+++. |+.++.+..|
T Consensus 135 tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~ 212 (305)
T PF07433_consen 135 TMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQW 212 (305)
T ss_pred hcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCChHHH
Confidence 1133566777676652222 222222245777788776666666554432 44555554 3333555543
Q ss_pred ---cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 393 ---IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 393 ---~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.+.+.+++++.++..+.+ +|+. -..+..+|.+++.
T Consensus 213 ~~l~~Y~gSIa~~~~g~~ia~--tsPr-Gg~~~~~d~~tg~ 250 (305)
T PF07433_consen 213 RRLNGYIGSIAADRDGRLIAV--TSPR-GGRVAVWDAATGR 250 (305)
T ss_pred HhhCCceEEEEEeCCCCEEEE--ECCC-CCEEEEEECCCCC
Confidence 245677888888886654 4543 3567788988884
No 295
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.48 E-value=0.00092 Score=61.99 Aligned_cols=87 Identities=11% Similarity=0.064 Sum_probs=62.5
Q ss_pred CcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHH
Q 004766 498 SFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGA 577 (732)
Q Consensus 498 ~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 577 (732)
.++......|+++|+.|+.+|-+- .-|. ....+..-.|+...+++..++-- .+|+.+.|.|+|+=++-.
T Consensus 16 ~~d~~~a~~l~~~G~~VvGvdsl~-----Yfw~----~rtP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGADvlP~ 84 (192)
T PF06057_consen 16 DLDKQIAEALAKQGVPVVGVDSLR-----YFWS----ERTPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGADVLPF 84 (192)
T ss_pred hhhHHHHHHHHHCCCeEEEechHH-----HHhh----hCCHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCchhHHH
Confidence 566667778888999999999642 1122 23345567889999888777633 469999999999999989
Q ss_pred HHhhCCCeeeEEEEcCCc
Q 004766 578 CINQRPDLFGCALAHVGV 595 (732)
Q Consensus 578 ~~~~~p~~f~a~v~~~p~ 595 (732)
+.++-|...++-|..+-+
T Consensus 85 ~~nrLp~~~r~~v~~v~L 102 (192)
T PF06057_consen 85 IYNRLPAALRARVAQVVL 102 (192)
T ss_pred HHhhCCHHHHhheeEEEE
Confidence 888877755444444333
No 296
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.47 E-value=0.0016 Score=67.27 Aligned_cols=89 Identities=13% Similarity=0.105 Sum_probs=59.4
Q ss_pred hHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhh
Q 004766 502 SRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 502 ~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 581 (732)
.+..+|.++|.-|++++.|+-... .. .........+++..|++.+++. +-.++|-+.|+|.||.+...+++.
T Consensus 130 s~V~~l~~~g~~vfvIsw~nPd~~-~~-----~~~~edYi~e~l~~aid~v~~i--tg~~~InliGyCvGGtl~~~ala~ 201 (445)
T COG3243 130 SLVRWLLEQGLDVFVISWRNPDAS-LA-----AKNLEDYILEGLSEAIDTVKDI--TGQKDINLIGYCVGGTLLAAALAL 201 (445)
T ss_pred cHHHHHHHcCCceEEEeccCchHh-hh-----hccHHHHHHHHHHHHHHHHHHH--hCccccceeeEecchHHHHHHHHh
Confidence 355677779999999998874421 11 1112222235555777777765 334689999999999999999888
Q ss_pred CCCe-eeEEEEcCCcccc
Q 004766 582 RPDL-FGCALAHVGVMDM 598 (732)
Q Consensus 582 ~p~~-f~a~v~~~p~~d~ 598 (732)
++.. .+.++...-.+|.
T Consensus 202 ~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 202 MAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred hhhcccccceeeecchhh
Confidence 7876 6666655444443
No 297
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=97.46 E-value=0.017 Score=61.16 Aligned_cols=233 Identities=12% Similarity=0.088 Sum_probs=130.8
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSN 215 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~ 215 (732)
.++||+|..+.|..+. ..++++++.+-......+...+++.++.||-+.--+.+..-... .+
T Consensus 130 ~~qfs~dEsl~arlv~------nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~------------kG 191 (566)
T KOG2315|consen 130 VPQFSIDESLAARLVS------NEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEK------------KG 191 (566)
T ss_pred ccccccchhhhhhhhc------ceEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEccCC------------CC
Confidence 5789999999888862 36788887653322222222345788999875433333222111 24
Q ss_pred cccEEEEEECCCCCCC----CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCc-------ceEEEEEEeCCCCCCCcc
Q 004766 216 LYHEFYYHFLGTKQSE----DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCD-------PVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 216 ~~~~v~~~~lgt~~~~----~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~-------~~~~l~~~d~~~~~~~~~ 284 (732)
.+..|.++........ ....|.. + -+...|.+-|.-|++.....-+ .++.||+++.++ .
T Consensus 192 aPa~vri~~~~~~~~~~~~a~ksFFka-d----kvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g-~---- 261 (566)
T KOG2315|consen 192 APASVRIYKYPEEGQHQPVANKSFFKA-D----KVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQG-E---- 261 (566)
T ss_pred CCcEEEEeccccccccchhhhcccccc-c----eeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecC-c----
Confidence 5566666666522111 1111111 1 2467899999888766543221 257899998874 2
Q ss_pred cccccCCCCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CE
Q 004766 285 GFKKRDGLLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQ 362 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~ 362 (732)
.....|.. ....+. .|+++|+.+.++..-- -.++-.+|++..- .--+++.+. ..+.+.+. +.
T Consensus 262 --------s~~V~L~k-~GPVhdv~W~~s~~EF~VvyGfM--PAkvtifnlr~~~--v~df~egpR---N~~~fnp~g~i 325 (566)
T KOG2315|consen 262 --------SVSVPLLK-EGPVHDVTWSPSGREFAVVYGFM--PAKVTIFNLRGKP--VFDFPEGPR---NTAFFNPHGNI 325 (566)
T ss_pred --------eEEEecCC-CCCceEEEECCCCCEEEEEEecc--cceEEEEcCCCCE--eEeCCCCCc---cceEECCCCCE
Confidence 11223332 222333 4999999998876532 2356677776532 222344322 33455654 44
Q ss_pred EEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEec
Q 004766 363 MIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTS 414 (732)
Q Consensus 363 l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss 414 (732)
+++..-.+-.+.+-+||..+-+.+..+..... +.+.++|||..++-..++
T Consensus 326 i~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~t--t~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 326 ILLAGFGNLPGDMEVWDVPNRKLIAKFKAANT--TVFEWSPDGEYFLTATTA 375 (566)
T ss_pred EEEeecCCCCCceEEEeccchhhccccccCCc--eEEEEcCCCcEEEEEecc
Confidence 56666666677999999876443333332222 356789999877655444
No 298
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.44 E-value=0.006 Score=62.24 Aligned_cols=200 Identities=15% Similarity=0.114 Sum_probs=105.8
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce-ecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV-EADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~-~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
..+++++||..||- |.....++||+...-.. +.+......+..+.|||||+.|+++..+
T Consensus 148 k~vaf~~~gs~lat-----gg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d--------------- 207 (398)
T KOG0771|consen 148 KVVAFNGDGSKLAT-----GGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD--------------- 207 (398)
T ss_pred eEEEEcCCCCEeee-----ccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC---------------
Confidence 46889999999983 34557899999655442 3233333345789999999999998533
Q ss_pred CCcccEEEEEECCCCCCCCeEEEe-c-CCCCeeEEEeEEecCC--cEEEEEEecCCcceEEEEEEeCC--CCCCCccccc
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWK-D-PEHPKYIFSGHVTEDG--QYLVMCIEENCDPVNKVYYCDLS--ALPEGLEGFK 287 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~-~-~~~~~~~~~~~~SpDg--~~l~~~~~~~~~~~~~l~~~d~~--~~~~~~~~~~ 287 (732)
...+|+..++.. +.. . .+.+..+....|+-|+ ..+.+....... ..+..+++. .+. .
T Consensus 208 -----~~~VW~~~~g~~----~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~--~~v~~~~~~~w~~~-~----- 270 (398)
T KOG0771|consen 208 -----SARVWSVNTGAA----LARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPG--GGVRLCDISLWSGS-N----- 270 (398)
T ss_pred -----ceEEEEeccCch----hhhcCCcccchhhhhceecccCCCceEEEEEecCCC--CceeEEEeeeeccc-c-----
Confidence 345566655421 111 1 1111122355666665 222222222221 112222221 110 0
Q ss_pred ccCCCCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEE
Q 004766 288 KRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVS 366 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~ 366 (732)
-.+.+..+.... .....+|.||+.+.+-++. +.+..++..+-+ ...++++.....+.++.++++.+....
T Consensus 271 ----~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~d----GsVai~~~~~lq-~~~~vk~aH~~~VT~ltF~Pdsr~~~s 341 (398)
T KOG0771|consen 271 ----FLRLRKKIKRFKSISSLAVSDDGKFLALGTMD----GSVAIYDAKSLQ-RLQYVKEAHLGFVTGLTFSPDSRYLAS 341 (398)
T ss_pred ----ccchhhhhhccCcceeEEEcCCCcEEEEeccC----CcEEEEEeceee-eeEeehhhheeeeeeEEEcCCcCcccc
Confidence 011222222221 2223478899988877763 246677766554 344556554457888888886555545
Q ss_pred EecCCeeEEEEEeC
Q 004766 367 YLSDVKYVLQIRDL 380 (732)
Q Consensus 367 ~~~~g~~~l~~~d~ 380 (732)
...+....|..+..
T Consensus 342 vSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 342 VSSDNEAAVTKLAV 355 (398)
T ss_pred cccCCceeEEEEee
Confidence 44444344444444
No 299
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=97.43 E-value=0.038 Score=57.16 Aligned_cols=237 Identities=13% Similarity=0.110 Sum_probs=120.2
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccccc-ceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALS-WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
-.+-.+++||||++||+. |. ...|.|||..+++.+..... ...+.+++|-..-..+|.++.+
T Consensus 203 keil~~avS~Dgkylatg----g~-d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~D------------ 265 (479)
T KOG0299|consen 203 KEILTLAVSSDGKYLATG----GR-DRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASAD------------ 265 (479)
T ss_pred ceeEEEEEcCCCcEEEec----CC-CceEEEecCcccchhhcccccccceeeeeeecCccceeeeecC------------
Confidence 345578899999999965 22 25788999999997655222 2235677776444445544332
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
..+.+|.+..-. -...+|..++ -+.++.-..-++-+-+.. +. .+.++|-+.-++
T Consensus 266 -------rsvkvw~~~~~s-~vetlyGHqd---~v~~IdaL~reR~vtVGg-rD--rT~rlwKi~ees------------ 319 (479)
T KOG0299|consen 266 -------RSVKVWSIDQLS-YVETLYGHQD---GVLGIDALSRERCVTVGG-RD--RTVRLWKIPEES------------ 319 (479)
T ss_pred -------CceEEEehhHhH-HHHHHhCCcc---ceeeechhcccceEEecc-cc--ceeEEEeccccc------------
Confidence 345666654321 1123443222 233444443444332221 21 245565553222
Q ss_pred CCCCcEEeeecccceEEEEE-ecCCeEEEEeCCCCCCceEEEEeCCCCCC-ce-----EeccCC----CCCceeEEEEec
Q 004766 291 GLLPFVKLIDGFDAQYEVIA-NDDTVFTFLTNKDAPKYKIIRVDLKEPND-WF-----EVIPEA----ERDVLESATAVN 359 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~~~~~s-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~-----~l~~~~----~~~~l~~~~~~~ 359 (732)
+.+..+......+.. -+..+++. +..++.|+++++...+. +. .+.+.. ....+.++...+
T Consensus 320 -----qlifrg~~~sidcv~~In~~Hfvs----GSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~ 390 (479)
T KOG0299|consen 320 -----QLIFRGGEGSIDCVAFINDEHFVS----GSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIP 390 (479)
T ss_pred -----eeeeeCCCCCeeeEEEecccceee----ccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecc
Confidence 111122222222111 13345442 23356788887765441 11 111110 012567777777
Q ss_pred CCEEEEEEecCCeeEEEEEeCCCCc-eeeecc-cc-cceeeEeecccCCcEEEEEEecCCCCceEE
Q 004766 360 LNQMIVSYLSDVKYVLQIRDLKNGS-LLHQLP-IE-IGSVNAISARREDSVVFISFTSFLIPGIVY 422 (732)
Q Consensus 360 ~~~l~~~~~~~g~~~l~~~d~~~g~-~~~~l~-~~-~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y 422 (732)
+..|+.+..-+|.-+|| -..+|- .+..|. ++ .|.|.++.++.+|+.++....-...-++++
T Consensus 391 ~sdL~asGS~~G~vrLW--~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~ 454 (479)
T KOG0299|consen 391 GSDLLASGSWSGCVRLW--KIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGIGKEHRLGRWW 454 (479)
T ss_pred cCceEEecCCCCceEEE--EecCCccccceeeecccccEEEEEEEccCCCEEEEecccccccceee
Confidence 67788888878755554 444452 112221 22 577888888888887766543333333333
No 300
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=97.41 E-value=0.017 Score=63.25 Aligned_cols=245 Identities=15% Similarity=0.088 Sum_probs=141.7
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
..+..+.+|.|...++-. .| ..|.+|+..+++.+.....+ ..-...|-|.++.|+.....+
T Consensus 374 ~dVRsl~vS~d~~~~~Sg---a~---~SikiWn~~t~kciRTi~~~-y~l~~~Fvpgd~~Iv~G~k~G------------ 434 (888)
T KOG0306|consen 374 SDVRSLCVSSDSILLASG---AG---ESIKIWNRDTLKCIRTITCG-YILASKFVPGDRYIVLGTKNG------------ 434 (888)
T ss_pred hheeEEEeecCceeeeec---CC---CcEEEEEccCcceeEEeccc-cEEEEEecCCCceEEEeccCC------------
Confidence 457889999998655521 22 26889999988754322212 224567889888888765332
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCC---CCCCC-ccccc
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS---ALPEG-LEGFK 287 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~---~~~~~-~~~~~ 287 (732)
.+-++++.+..- +=..+.+.+-+.+++.+||++..+..+.+.+ -.+|-..+. .+... ...+.
T Consensus 435 -------el~vfdlaS~~l----~Eti~AHdgaIWsi~~~pD~~g~vT~saDkt---VkfWdf~l~~~~~gt~~k~lsl~ 500 (888)
T KOG0306|consen 435 -------ELQVFDLASASL----VETIRAHDGAIWSISLSPDNKGFVTGSADKT---VKFWDFKLVVSVPGTQKKVLSLK 500 (888)
T ss_pred -------ceEEEEeehhhh----hhhhhccccceeeeeecCCCCceEEecCCcE---EEEEeEEEEeccCcccceeeeec
Confidence 456667665421 1111223445678999999999877665433 333322221 11100 00000
Q ss_pred ccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEE
Q 004766 288 KRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSY 367 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~ 367 (732)
+ -+.|--..+.-...+||||+.|++.- .+. ..++|.+| +-+-...|..|. -.+..+.+++|..++++.
T Consensus 501 ~------~rtLel~ddvL~v~~Spdgk~LaVsL-Ldn-TVkVyflD--tlKFflsLYGHk--LPV~smDIS~DSklivTg 568 (888)
T KOG0306|consen 501 H------TRTLELEDDVLCVSVSPDGKLLAVSL-LDN-TVKVYFLD--TLKFFLSLYGHK--LPVLSMDISPDSKLIVTG 568 (888)
T ss_pred c------ceEEeccccEEEEEEcCCCcEEEEEe-ccC-eEEEEEec--ceeeeeeecccc--cceeEEeccCCcCeEEec
Confidence 0 01111111111224899998777533 222 45677766 333235666665 567788899888999999
Q ss_pred ecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 368 LSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 368 ~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
+.| ..+.+|-++=|...+.+-.+..+|+.+.+-|. ..++|+.+- -..+-.||..
T Consensus 569 SAD--KnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~-~~~FFt~gK---D~kvKqWDg~ 622 (888)
T KOG0306|consen 569 SAD--KNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPK-THLFFTCGK---DGKVKQWDGE 622 (888)
T ss_pred cCC--CceEEeccccchhhhhhhcccCceeEEEEccc-ceeEEEecC---cceEEeechh
Confidence 888 45777777767765666656777888887774 456665543 2456666643
No 301
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=97.41 E-value=0.0071 Score=63.94 Aligned_cols=145 Identities=13% Similarity=0.094 Sum_probs=89.2
Q ss_pred eEEECCCCcEEEEEEecc----CCc---eEEEEEEECCCCce-ecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 136 KVSVSEDAKYLAYALSYS----GSD---WATIKLMRIEDQIV-EADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~----G~e---~~~i~v~dl~~g~~-~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
.+.|.+-|+-|+...+.. |.. ..+||++++++-.. ++....+ .+.++.|+|+|+.|+.+-.
T Consensus 222 qm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~G-PVhdv~W~~s~~EF~VvyG---------- 290 (566)
T KOG2315|consen 222 QMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEG-PVHDVTWSPSGREFAVVYG---------- 290 (566)
T ss_pred EEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCC-CceEEEECCCCCEEEEEEe----------
Confidence 356888888777665432 211 24899999984332 2322222 3589999999999888752
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
--|..+-.+++... .|++.+..+. ..+-|+|-|++|++..-.+- ..++-++|..+.+
T Consensus 291 -------fMPAkvtifnlr~~-----~v~df~egpR--N~~~fnp~g~ii~lAGFGNL--~G~mEvwDv~n~K------- 347 (566)
T KOG2315|consen 291 -------FMPAKVTIFNLRGK-----PVFDFPEGPR--NTAFFNPHGNIILLAGFGNL--PGDMEVWDVPNRK------- 347 (566)
T ss_pred -------cccceEEEEcCCCC-----EeEeCCCCCc--cceEECCCCCEEEEeecCCC--CCceEEEeccchh-------
Confidence 23445666666532 5665554442 25779999999999876554 3445566766521
Q ss_pred ccCCCCCcEEeeecccceEEEEEecCCeEEEEeC
Q 004766 288 KRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTN 321 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~ 321 (732)
.+... .-.+..+.-|+|||++|+..+.
T Consensus 348 ------~i~~~-~a~~tt~~eW~PdGe~flTATT 374 (566)
T KOG2315|consen 348 ------LIAKF-KAANTTVFEWSPDGEYFLTATT 374 (566)
T ss_pred ------hcccc-ccCCceEEEEcCCCcEEEEEec
Confidence 01111 1123345569999998886654
No 302
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=97.41 E-value=0.021 Score=56.23 Aligned_cols=218 Identities=13% Similarity=0.035 Sum_probs=105.5
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
+...+..+.||+||++|+-++ ....|.+||+..|.++....-.....+..|.|-.+..+.+..-+
T Consensus 64 H~~pi~sl~WS~dgr~LltsS-----~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~---------- 128 (405)
T KOG1273|consen 64 HVRPITSLCWSRDGRKLLTSS-----RDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIME---------- 128 (405)
T ss_pred cccceeEEEecCCCCEeeeec-----CCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEec----------
Confidence 345688999999999987553 23578999999998654322111234566777554444443211
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEe---EEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSG---HVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~---~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
. .-++.+++.+ ...++-..++.+ ..... .+.+-|++|+...+ ...+.+++.++.++.
T Consensus 129 ------~--sp~vi~~s~~--~h~~Lp~d~d~d-ln~sas~~~fdr~g~yIitGts-----KGkllv~~a~t~e~v---- 188 (405)
T KOG1273|consen 129 ------E--SPVVIDFSDP--KHSVLPKDDDGD-LNSSASHGVFDRRGKYIITGTS-----KGKLLVYDAETLECV---- 188 (405)
T ss_pred ------C--CcEEEEecCC--ceeeccCCCccc-cccccccccccCCCCEEEEecC-----cceEEEEecchheee----
Confidence 0 1223333332 122222111111 11222 37888999865433 345788888774321
Q ss_pred cccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCC---CCCCceEeccCCC------CCceeEEEE
Q 004766 287 KKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK---EPNDWFEVIPEAE------RDVLESATA 357 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~---~~~~~~~l~~~~~------~~~l~~~~~ 357 (732)
..-+.+.--....-.++-.|+.|++-+.+. -|-.++++ ....-..+.+... ...-..+.+
T Consensus 189 -------as~rits~~~IK~I~~s~~g~~liiNtsDR----vIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccf 257 (405)
T KOG1273|consen 189 -------ASFRITSVQAIKQIIVSRKGRFLIINTSDR----VIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCF 257 (405)
T ss_pred -------eeeeechheeeeEEEEeccCcEEEEecCCc----eEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheee
Confidence 011111100001113566777777644321 13333332 1110011111000 001123455
Q ss_pred ecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccc
Q 004766 358 VNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIG 394 (732)
Q Consensus 358 ~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g 394 (732)
+.++..++..+ .....||+|....|..++.|..+.|
T Consensus 258 s~dgeYv~a~s-~~aHaLYIWE~~~GsLVKILhG~kg 293 (405)
T KOG1273|consen 258 SGDGEYVCAGS-ARAHALYIWEKSIGSLVKILHGTKG 293 (405)
T ss_pred cCCccEEEecc-ccceeEEEEecCCcceeeeecCCch
Confidence 55333333333 3447899999888887666665543
No 303
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=97.40 E-value=0.16 Score=50.15 Aligned_cols=74 Identities=11% Similarity=0.054 Sum_probs=47.8
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
.|+.++|||.+..|+.++- + ..|+++|+.+.+.+.........-..+|.+ ...++...
T Consensus 15 ~IS~v~f~~~~~~LLvssW-D----gslrlYdv~~~~l~~~~~~~~plL~c~F~d-~~~~~~G~---------------- 72 (323)
T KOG1036|consen 15 GISSVKFSPSSSDLLVSSW-D----GSLRLYDVPANSLKLKFKHGAPLLDCAFAD-ESTIVTGG---------------- 72 (323)
T ss_pred ceeeEEEcCcCCcEEEEec-c----CcEEEEeccchhhhhheecCCceeeeeccC-CceEEEec----------------
Confidence 3678999999998887752 2 368889987765332222222234567774 45666653
Q ss_pred cCCcccEEEEEECCCCCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSE 231 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~ 231 (732)
-..+|.++|+.+++..
T Consensus 73 ---~dg~vr~~Dln~~~~~ 88 (323)
T KOG1036|consen 73 ---LDGQVRRYDLNTGNED 88 (323)
T ss_pred ---cCceEEEEEecCCcce
Confidence 3347999999887643
No 304
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.40 E-value=0.043 Score=55.01 Aligned_cols=142 Identities=18% Similarity=0.094 Sum_probs=78.1
Q ss_pred eCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCC--ce--EEEEEEECCCCceecccccceeeeeEEEE
Q 004766 111 DSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGS--DW--ATIKLMRIEDQIVEADALSWFKFSSIAWT 186 (732)
Q Consensus 111 ~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~--e~--~~i~v~dl~~g~~~~~~~~~~~~~~~~Ws 186 (732)
+..+++-+++++... ..........+.+.|||+ |.++...... .. ..|+.++.. ++.......-....+++|+
T Consensus 66 d~~~g~~~~~~~~~~-~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s 142 (246)
T PF08450_consen 66 DPDTGKVTVLADLPD-GGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFS 142 (246)
T ss_dssp ETTTTEEEEEEEEET-TCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEE
T ss_pred ecCCCcEEEEeeccC-CCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEEC
Confidence 333444455555411 111346678899999999 4444332211 11 578999987 5532211111113689999
Q ss_pred eCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCC--C-CeEEEecCCCCeeEEEeEEecCCcEEEEEEec
Q 004766 187 HDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS--E-DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEE 263 (732)
Q Consensus 187 pDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~--~-~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 263 (732)
||++.||++.. ...+|+++++..... . ...+.+.+...+...++++..+|+. ++....
T Consensus 143 ~dg~~lyv~ds------------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l-~va~~~ 203 (246)
T PF08450_consen 143 PDGKTLYVADS------------------FNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNL-WVADWG 203 (246)
T ss_dssp TTSSEEEEEET------------------TTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-E-EEEEET
T ss_pred Ccchheeeccc------------------ccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCE-EEEEcC
Confidence 99999988642 335699998864332 1 1223333333334568899999974 333332
Q ss_pred CCcceEEEEEEeCCC
Q 004766 264 NCDPVNKVYYCDLSA 278 (732)
Q Consensus 264 ~~~~~~~l~~~d~~~ 278 (732)
...|++++.++
T Consensus 204 ----~~~I~~~~p~G 214 (246)
T PF08450_consen 204 ----GGRIVVFDPDG 214 (246)
T ss_dssp ----TTEEEEEETTS
T ss_pred ----CCEEEEECCCc
Confidence 35688888774
No 305
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.39 E-value=0.038 Score=66.86 Aligned_cols=213 Identities=10% Similarity=0.050 Sum_probs=113.5
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccccc--------c---------eeeeeEEEEeCCcEEEEEE
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALS--------W---------FKFSSIAWTHDSKGFFYSR 196 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~--------~---------~~~~~~~WspDg~~l~y~~ 196 (732)
-.++.++++|+.| |+.+..+ ..|+++|+.++........ + ....+++++|++..||++.
T Consensus 626 P~GIavd~~gn~L-YVaDt~n---~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad 701 (1057)
T PLN02919 626 PQGLAYNAKKNLL-YVADTEN---HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAM 701 (1057)
T ss_pred CcEEEEeCCCCEE-EEEeCCC---ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEE
Confidence 3578899998865 4445433 4789999887764321100 0 0124689999777777653
Q ss_pred ecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecC------C-------CCeeEEEeEEecCCcEEEEEEec
Q 004766 197 YPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDP------E-------HPKYIFSGHVTEDGQYLVMCIEE 263 (732)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~------~-------~~~~~~~~~~SpDg~~l~~~~~~ 263 (732)
...++|++++..++.. .++... . .-..-.+++++|||++|++....
T Consensus 702 ------------------~~~~~I~v~d~~~g~v---~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~ 760 (1057)
T PLN02919 702 ------------------AGQHQIWEYNISDGVT---RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSE 760 (1057)
T ss_pred ------------------CCCCeEEEEECCCCeE---EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECC
Confidence 2335677777654321 111110 0 00112368899999998765432
Q ss_pred CCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-----c------c-cceEEEEEecCCeEEEEeCCCCCCceEEE
Q 004766 264 NCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-----G------F-DAQYEVIANDDTVFTFLTNKDAPKYKIIR 331 (732)
Q Consensus 264 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-----~------~-~~~~~~~s~dg~~l~~~s~~~~~~~~l~~ 331 (732)
++.|+++|++++.... + ..........+.. + . ...-..++++|+ +|+ ++. .+.+|.+
T Consensus 761 ----n~~Irv~D~~tg~~~~--~-~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYV-ADs--~N~rIrv 829 (1057)
T PLN02919 761 ----SSSIRALDLKTGGSRL--L-AGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYV-ADS--YNHKIKK 829 (1057)
T ss_pred ----CCeEEEEECCCCcEEE--E-EecccccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEE-EEC--CCCEEEE
Confidence 3568888887532100 0 0000000000000 0 0 001123677775 554 432 3567999
Q ss_pred EeCCCCCCceEeccCCC------------CCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCce
Q 004766 332 VDLKEPNDWFEVIPEAE------------RDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL 385 (732)
Q Consensus 332 ~d~~~~~~~~~l~~~~~------------~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~ 385 (732)
+|.+++. ...+..... -....++.+++++.+|++...+ ..|.++|+++++.
T Consensus 830 iD~~tg~-v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~N--n~Irvid~~~~~~ 892 (1057)
T PLN02919 830 LDPATKR-VTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNN--SLIRYLDLNKGEA 892 (1057)
T ss_pred EECCCCe-EEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCC--CEEEEEECCCCcc
Confidence 9987765 333332110 0123567777767787776555 5899999987654
No 306
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.37 E-value=0.027 Score=58.99 Aligned_cols=231 Identities=13% Similarity=0.081 Sum_probs=133.5
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCce--ecc-cccceeeeeEEEEeC--CcEEEEEEecCCCCCCCCCCCC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV--EAD-ALSWFKFSSIAWTHD--SKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~--~~~-~~~~~~~~~~~WspD--g~~l~y~~~~~~~~~~~~~~~~ 210 (732)
.++||-|.+++|.++ |+ .|+|.++ |+.. .+. .+....+..++|||- +..|+|-.-..
T Consensus 136 ~~k~s~~D~y~ARvv---~~---sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk----------- 197 (561)
T COG5354 136 VLKFSIDDKYVARVV---GS---SLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEK----------- 197 (561)
T ss_pred eeeeeecchhhhhhc---cC---eEEEEec-CCccccCchhhccccceeeEEecCCCCCceEEEEcccc-----------
Confidence 468999999999985 33 6888887 5542 111 111123578999996 45566654211
Q ss_pred cccCCcccEEEEEECCCCCCC-CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCC----c--ceEEEEEEeCCCCCCCc
Q 004766 211 ETDSNLYHEFYYHFLGTKQSE-DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENC----D--PVNKVYYCDLSALPEGL 283 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~-~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~----~--~~~~l~~~d~~~~~~~~ 283 (732)
.+.+.++..+.+..+... ...++... .+.+.|-+.|++|++....+. + ..+.||++++....
T Consensus 198 ---~~kpa~~~i~sIp~~s~l~tk~lfk~~-----~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~--- 266 (561)
T COG5354 198 ---LNKPAMVRILSIPKNSVLVTKNLFKVS-----GVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS--- 266 (561)
T ss_pred ---CCCCcEEEEEEccCCCeeeeeeeEeec-----ccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc---
Confidence 345667777777633211 12233321 247899999999988775543 1 13779999887521
Q ss_pred ccccccCCCCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-C
Q 004766 284 EGFKKRDGLLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-N 361 (732)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~ 361 (732)
.+... .-.+.... .|.|+++++.+++... ...+..+|+.+. .+-.+|+..... +.+++. +
T Consensus 267 ---------i~V~~--~~~~pVhdf~W~p~S~~F~vi~g~~--pa~~s~~~lr~N--l~~~~Pe~~rNT---~~fsp~~r 328 (561)
T COG5354 267 ---------IPVEK--DLKDPVHDFTWEPLSSRFAVISGYM--PASVSVFDLRGN--LRFYFPEQKRNT---IFFSPHER 328 (561)
T ss_pred ---------cceec--cccccceeeeecccCCceeEEeccc--ccceeecccccc--eEEecCCccccc---ccccCccc
Confidence 11211 11222222 4999999999888532 234667777664 355556553222 233432 5
Q ss_pred EEEEEEecCCeeEEEEEeCCCCceeeec-ccccceeeEeecccCCcEEEEEEecC
Q 004766 362 QMIVSYLSDVKYVLQIRDLKNGSLLHQL-PIEIGSVNAISARREDSVVFISFTSF 415 (732)
Q Consensus 362 ~l~~~~~~~g~~~l~~~d~~~g~~~~~l-~~~~g~v~~~~~s~d~~~l~~~~ss~ 415 (732)
++++..-.+-...+.+++.. |+- ..+ .+..-..+...++||+..+...+.|+
T Consensus 329 ~il~agF~nl~gni~i~~~~-~rf-~~~~~~~~~n~s~~~wspd~qF~~~~~ts~ 381 (561)
T COG5354 329 YILFAGFDNLQGNIEIFDPA-GRF-KVAGAFNGLNTSYCDWSPDGQFYDTDTTSE 381 (561)
T ss_pred EEEEecCCccccceEEeccC-Cce-EEEEEeecCCceEeeccCCceEEEecCCCc
Confidence 67776666766788899987 553 222 22111122345788887555544443
No 307
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=97.37 E-value=0.068 Score=52.77 Aligned_cols=234 Identities=14% Similarity=0.112 Sum_probs=120.6
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccccc-ceeeeeEEEEeCCc--EEEEEEecCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALS-WFKFSSIAWTHDSK--GFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~-~~~~~~~~WspDg~--~l~y~~~~~~~~~~~~~~ 208 (732)
.++..+++| |.++| .|+..-+|+|+|+.+...+..... ......+.|.++-. .|+-.+.+
T Consensus 44 ~sitavAVs--~~~~a-----SGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdD---------- 106 (362)
T KOG0294|consen 44 GSITALAVS--GPYVA-----SGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDD---------- 106 (362)
T ss_pred cceeEEEec--ceeEe-----ccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCC----------
Confidence 346666665 77776 333335999999987654332211 11235667777654 55554332
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
..|..|+.+.= +++-....+...+..++..|.||..+-+..+ ..+.+++|-.|..+
T Consensus 107 ---------G~i~iw~~~~W----~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D-----~~lr~WNLV~Gr~a------ 162 (362)
T KOG0294|consen 107 ---------GHIIIWRVGSW----ELLKSLKAHKGQVTDLSIHPSGKLALSVGGD-----QVLRTWNLVRGRVA------ 162 (362)
T ss_pred ---------CcEEEEEcCCe----EEeeeecccccccceeEecCCCceEEEEcCC-----ceeeeehhhcCccc------
Confidence 35666666542 2332222233446688999999976544432 33677787665321
Q ss_pred cCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 289 RDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 289 ~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
-..+|.. ......|+|.|+++++.... ...+|..+.+ .-..++.-+ ..+..+.+..++.++ ...
T Consensus 163 -----~v~~L~~--~at~v~w~~~Gd~F~v~~~~---~i~i~q~d~A--~v~~~i~~~---~r~l~~~~l~~~~L~-vG~ 226 (362)
T KOG0294|consen 163 -----FVLNLKN--KATLVSWSPQGDHFVVSGRN---KIDIYQLDNA--SVFREIENP---KRILCATFLDGSELL-VGG 226 (362)
T ss_pred -----eeeccCC--cceeeEEcCCCCEEEEEecc---EEEEEecccH--hHhhhhhcc---ccceeeeecCCceEE-Eec
Confidence 0112211 12233599999999876532 2345554432 211222211 112233444424444 444
Q ss_pred cCCeeEEEEEeCCCCceeeecccccceeeEee-c-ccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAIS-A-RREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~-~-s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
++ ..|.++|-+++.....+..+...|-++. . .+++ +++++.+|. +.+..||+..
T Consensus 227 d~--~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~-~~lvTaSSD---G~I~vWd~~~ 282 (362)
T KOG0294|consen 227 DN--EWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEH-EYLVTASSD---GFIKVWDIDM 282 (362)
T ss_pred CC--ceEEEeccCCCccceeeecchhheeeeEEEecCCc-eEEEEeccC---ceEEEEEccc
Confidence 45 4688888876655455544433343332 2 3333 566666663 4555555543
No 308
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.35 E-value=0.057 Score=60.39 Aligned_cols=214 Identities=14% Similarity=0.176 Sum_probs=116.8
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccccccee-eeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFK-FSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~-~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...+.++.|.|++-. |+ +|.+.+.|.||+..+.+.+-.-.+.-+ .....|.+.=-+|+-.++
T Consensus 51 dGpVRgv~FH~~qpl--FV---SGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASD------------ 113 (1202)
T KOG0292|consen 51 DGPVRGVDFHPTQPL--FV---SGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASD------------ 113 (1202)
T ss_pred CCccceeeecCCCCe--EE---ecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccC------------
Confidence 345779999999873 44 345569999999988775421111111 134455554445555443
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCC------c
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEG------L 283 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~------~ 283 (732)
.+.|..|+.-+.. -+.+..+ +.-|++-..|.|....|+-.+-+ ..|.+||..+...+ +
T Consensus 114 -------DQTIrIWNwqsr~--~iavltG--HnHYVMcAqFhptEDlIVSaSLD-----QTVRVWDisGLRkk~~~pg~~ 177 (1202)
T KOG0292|consen 114 -------DQTIRIWNWQSRK--CIAVLTG--HNHYVMCAQFHPTEDLIVSASLD-----QTVRVWDISGLRKKNKAPGSL 177 (1202)
T ss_pred -------CCeEEEEeccCCc--eEEEEec--CceEEEeeccCCccceEEEeccc-----ceEEEEeecchhccCCCCCCc
Confidence 2357777776543 2344443 44578888999988877655433 33677787652211 0
Q ss_pred ccccc---------cCCCCCcEEeeecccceEE--EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCce
Q 004766 284 EGFKK---------RDGLLPFVKLIDGFDAQYE--VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVL 352 (732)
Q Consensus 284 ~~~~~---------~~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l 352 (732)
+.... .+...-++.+..+.+..+. .|.| ..=+|++..+....+||+++- +.. |..=+-...-..+
T Consensus 178 e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhp--TlpliVSG~DDRqVKlWrmne-tKa-WEvDtcrgH~nnV 253 (1202)
T KOG0292|consen 178 EDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNE-TKA-WEVDTCRGHYNNV 253 (1202)
T ss_pred hhhhhccccchhhcCCcCeeeeeeecccccccceEEecC--CcceEEecCCcceeeEEEecc-ccc-eeehhhhcccCCc
Confidence 00000 0000112223334443333 3333 333445554445678888873 333 5533322222457
Q ss_pred eEEEEecCCEEEEEEecCCeeEEEEEeCCCC
Q 004766 353 ESATAVNLNQMIVSYLSDVKYVLQIRDLKNG 383 (732)
Q Consensus 353 ~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g 383 (732)
+++-+.+...++++..+|. .|++||+...
T Consensus 254 ssvlfhp~q~lIlSnsEDk--sirVwDm~kR 282 (1202)
T KOG0292|consen 254 SSVLFHPHQDLILSNSEDK--SIRVWDMTKR 282 (1202)
T ss_pred ceEEecCccceeEecCCCc--cEEEEecccc
Confidence 7777777566888888884 6888888643
No 309
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.32 E-value=0.0043 Score=66.37 Aligned_cols=168 Identities=16% Similarity=0.108 Sum_probs=99.7
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcE--EEEEcccCC-CCCchhHHhcccccCCccHHHHHHHHHHHHHH--
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAV--FCIANIRGG-GEYGEEWHKGGALAKKQNCFDDFISASEYLIS-- 554 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~--v~~~~~rG~-g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-- 554 (732)
-.|+++..||.+...-...|.-.|...|...|-+ +..+|++-. |+ .+-....+-++.+.++.+.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-----------~nI~h~ae~~vSf~r~kvlei 243 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-----------ANIKHAAEYSVSFDRYKVLEI 243 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-----------cchHHHHHHHHHHhhhhhhhh
Confidence 4689999999883222334444456666655533 334454421 11 1111122333444443222
Q ss_pred cCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccC
Q 004766 555 AGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHN 634 (732)
Q Consensus 555 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~ 634 (732)
.+-.--..|.++|+|+|..+++.+...+-|.|-.++...++.+- ...+. -|.++ +..+ .
T Consensus 244 ~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~-----~vdgp-----rgirD-E~Ll----------d 302 (784)
T KOG3253|consen 244 TGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLD-----TVDGP-----RGIRD-EALL----------D 302 (784)
T ss_pred hccCCCCceEEEecccCceeeEEeccccCCceEEEEEEeccccc-----CCCcc-----cCCcc-hhhH----------h
Confidence 23334578999999999888887777665555433332222110 01111 02222 2111 1
Q ss_pred CCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCC
Q 004766 635 VRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVG 705 (732)
Q Consensus 635 ~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 705 (732)
.+.|+|++.|.+|.+|++..-.++.+++++. +++++..+++|.+.
T Consensus 303 -------------mk~PVLFV~Gsnd~mcspn~ME~vreKMqA~-------------~elhVI~~adhsma 347 (784)
T KOG3253|consen 303 -------------MKQPVLFVIGSNDHMCSPNSMEEVREKMQAE-------------VELHVIGGADHSMA 347 (784)
T ss_pred -------------cCCceEEEecCCcccCCHHHHHHHHHHhhcc-------------ceEEEecCCCcccc
Confidence 5679999999999999999999999999864 68999999999875
No 310
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=97.23 E-value=0.019 Score=65.29 Aligned_cols=117 Identities=11% Similarity=0.047 Sum_probs=70.5
Q ss_pred cEEEEEEeccCCceEEEEEEECCCCceecc-cccceeeeeEEEEeCCcEEEE-EEecCCCCCCCCCCCCcccCCcccEEE
Q 004766 144 KYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHDSKGFFY-SRYPAPKEGKDMDAGTETDSNLYHEFY 221 (732)
Q Consensus 144 ~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspDg~~l~y-~~~~~~~~~~~~~~~~~~~~~~~~~v~ 221 (732)
.+|||..+..| +|.+.|..++..... ........+++|||||+.|+| ++... ..+...||
T Consensus 319 tkiAfv~~~~~----~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~--------------~~g~s~vY 380 (912)
T TIGR02171 319 AKLAFRNDVTG----NLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEG--------------LPGKSSVY 380 (912)
T ss_pred eeEEEEEcCCC----eEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecC--------------CCCCceEE
Confidence 57999987544 899999988764432 222223478999999999999 54332 12345699
Q ss_pred EEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCc-------ceEEEEEEeCCCCCC
Q 004766 222 YHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCD-------PVNKVYYCDLSALPE 281 (732)
Q Consensus 222 ~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~-------~~~~l~~~d~~~~~~ 281 (732)
+.+|.+....-+.+- .. ..-+-.-.+.++|..++....+..+ ....-|.+..+.|+.
T Consensus 381 v~~L~t~~~~~vkl~-ve--~aaiprwrv~e~gdt~ivyv~~a~nn~d~~~~~~~stw~v~f~~gkf 444 (912)
T TIGR02171 381 VRNLNASGSGLVKLP-VE--NAAIPRWRVLENGDTVIVYVSDASNNKDDATFAAYSTWQVPFANGKF 444 (912)
T ss_pred EEehhccCCCceEee-cc--cccccceEecCCCCeEEEEEcCCCCCcchhhhhhcceEEEEecCCCC
Confidence 999988765432221 11 1112223457778776544433221 023467788777653
No 311
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=97.23 E-value=0.0033 Score=67.88 Aligned_cols=111 Identities=12% Similarity=0.095 Sum_probs=70.6
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
+.+.+..+..||+|+.||-+....--+...|++|+..+=.... .....-....++|||||++|+-++.|.
T Consensus 524 HGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDR--------- 594 (764)
T KOG1063|consen 524 HGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDR--------- 594 (764)
T ss_pred CceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCc---------
Confidence 4578999999999999998876666666789999976533222 111112347899999999999886543
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
.+-+|..........-......+...+.+..|+||+++.+-
T Consensus 595 ----------t~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaT 635 (764)
T KOG1063|consen 595 ----------TVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFAT 635 (764)
T ss_pred ----------eEEeeeeecccchhhhhccccccceEEEEcccCcccceeEE
Confidence 33444443221110000012334556678899999999443
No 312
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=97.20 E-value=0.02 Score=63.45 Aligned_cols=103 Identities=15% Similarity=0.158 Sum_probs=67.9
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
.|=.++||-++-+|--+.| .++++|++...+.|.....+.-+..++|.|-.+..|.+-
T Consensus 371 DILDlSWSKn~fLLSSSMD------KTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSG---------------- 428 (712)
T KOG0283|consen 371 DILDLSWSKNNFLLSSSMD------KTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISG---------------- 428 (712)
T ss_pred hheecccccCCeeEecccc------ccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeec----------------
Confidence 4567889988754443332 489999999888776554443458899999555554441
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEEN 264 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 264 (732)
....++.+|.+-.. .+..+. +-...+..++++|||++.++....+
T Consensus 429 --SLD~KvRiWsI~d~---~Vv~W~--Dl~~lITAvcy~PdGk~avIGt~~G 473 (712)
T KOG0283|consen 429 --SLDGKVRLWSISDK---KVVDWN--DLRDLITAVCYSPDGKGAVIGTFNG 473 (712)
T ss_pred --ccccceEEeecCcC---eeEeeh--hhhhhheeEEeccCCceEEEEEecc
Confidence 23457888888542 223332 2234677899999999998876543
No 313
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=97.19 E-value=0.077 Score=53.68 Aligned_cols=253 Identities=15% Similarity=0.119 Sum_probs=129.4
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEE-eC-CcEEEEEEecCCCCCCCCCCCCc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWT-HD-SKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~Ws-pD-g~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
++++..+ +++|.- |+-...++|||+++................+|- +| .+..+.+.
T Consensus 108 VSsv~~~--~~~Ilt-----gsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsa--------------- 165 (423)
T KOG0313|consen 108 VSSVKGA--SKWILT-----GSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSA--------------- 165 (423)
T ss_pred hhhhccc--CceEEE-----eecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEe---------------
Confidence 3455555 566653 233347899999876644333222223455663 22 33333332
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC-CCCCcccccc--
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA-LPEGLEGFKK-- 288 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~-~~~~~~~~~~-- 288 (732)
...+.+.+|...-+.....++.....+..-+.+++..+||..++-.+.+. .-.+| +.+. ..+.++....
T Consensus 166 ---s~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~---~lkiW--s~~~~~~~~~E~~s~~r 237 (423)
T KOG0313|consen 166 ---SMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDT---MLKIW--SVETDEEDELESSSNRR 237 (423)
T ss_pred ---cCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccc---eeeec--ccCCCccccccccchhh
Confidence 22334444444333221111111112233455788889999876555432 23344 4111 1111111100
Q ss_pred ---------cCCCCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEe
Q 004766 289 ---------RDGLLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAV 358 (732)
Q Consensus 289 ---------~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~ 358 (732)
.+...|+..+....+..-. .|++ ...+| .... ...|..+|+.++.....++.. ..+..+...
T Consensus 238 rk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~y-S~Sw---DHTIk~WDletg~~~~~~~~~---ksl~~i~~~ 309 (423)
T KOG0313|consen 238 RKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIY-SVSW---DHTIKVWDLETGGLKSTLTTN---KSLNCISYS 309 (423)
T ss_pred hhhhhhhhcccccCceEEecccccceeeEEEcC-CCceE-eecc---cceEEEEEeecccceeeeecC---cceeEeecc
Confidence 0111122222222222112 3654 44444 3333 346899999988755555543 457777777
Q ss_pred cCCEEEEEEecCCeeEEEEEeCCCCc--e-eeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 359 NLNQMIVSYLSDVKYVLQIRDLKNGS--L-LHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 359 ~~~~l~~~~~~~g~~~l~~~d~~~g~--~-~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+..+|++....+ ..|++||+.++. . ...+..+...|+.+.++|.....+++.+-. .++-.+|+.+.
T Consensus 310 ~~~~Ll~~gssd--r~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D---~t~klWDvRS~ 378 (423)
T KOG0313|consen 310 PLSKLLASGSSD--RHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYD---NTVKLWDVRST 378 (423)
T ss_pred cccceeeecCCC--CceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecC---CeEEEEEeccC
Confidence 756788777766 578899987653 1 123334566788888898887777665543 35666776554
No 314
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=97.18 E-value=0.015 Score=60.64 Aligned_cols=218 Identities=11% Similarity=0.065 Sum_probs=123.1
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc-eeccc----c-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI-VEADA----L-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~-~~~~~----~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
+-...+|..-+++ |+ +|. .-|.|||+..-. ..+.. . .+.-..+.-.+|||+.|+..
T Consensus 422 VcAvtIS~~trhV-yT---gGk--gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivG------------ 483 (705)
T KOG0639|consen 422 VCAVTISNPTRHV-YT---GGK--GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVG------------ 483 (705)
T ss_pred EEEEEecCCccee-Ee---cCC--CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEec------------
Confidence 4456678777766 33 343 479999996422 11111 1 11113567789999999875
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
++...|-+|+|.++... +-.+.+.....-..++.|||.+..+-.-+++. |.+||+.+..
T Consensus 484 -------GeastlsiWDLAapTpr--ikaeltssapaCyALa~spDakvcFsccsdGn-----I~vwDLhnq~------- 542 (705)
T KOG0639|consen 484 -------GEASTLSIWDLAAPTPR--IKAELTSSAPACYALAISPDAKVCFSCCSDGN-----IAVWDLHNQT------- 542 (705)
T ss_pred -------cccceeeeeeccCCCcc--hhhhcCCcchhhhhhhcCCccceeeeeccCCc-----EEEEEcccce-------
Confidence 34567888999876432 11111111111135788999998766655443 7778887621
Q ss_pred ccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEE
Q 004766 288 KRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVS 366 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~ 366 (732)
.++.+....+.. ...+++||.+|+- ++....|-.+|+.++. .+..++-...|-++...+.+..++.
T Consensus 543 ------~VrqfqGhtDGascIdis~dGtklWT----GGlDntvRcWDlregr---qlqqhdF~SQIfSLg~cP~~dWlav 609 (705)
T KOG0639|consen 543 ------LVRQFQGHTDGASCIDISKDGTKLWT----GGLDNTVRCWDLREGR---QLQQHDFSSQIFSLGYCPTGDWLAV 609 (705)
T ss_pred ------eeecccCCCCCceeEEecCCCceeec----CCCccceeehhhhhhh---hhhhhhhhhhheecccCCCccceee
Confidence 122332222221 2247889988883 4556678889988764 2334432233333444454444445
Q ss_pred EecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCc
Q 004766 367 YLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDS 406 (732)
Q Consensus 367 ~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~ 406 (732)
..++ +++++.... +.....|.+....|-++-+++-|+
T Consensus 610 GMen--s~vevlh~s-kp~kyqlhlheScVLSlKFa~cGk 646 (705)
T KOG0639|consen 610 GMEN--SNVEVLHTS-KPEKYQLHLHESCVLSLKFAYCGK 646 (705)
T ss_pred eccc--CcEEEEecC-CccceeecccccEEEEEEecccCc
Confidence 5555 356666553 544456766655565666666665
No 315
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=97.18 E-value=0.0012 Score=69.18 Aligned_cols=92 Identities=14% Similarity=0.144 Sum_probs=59.1
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccccc-ceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALS-WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+..+.|||||++||.+.. ...|+|+|..+-+.+-.... -...-.++||||||+|+..-.|
T Consensus 292 ~in~f~FS~DG~~LA~VSq-----DGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGED------------- 353 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQ-----DGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGED------------- 353 (636)
T ss_pred cccceeEcCCCceEEEEec-----CceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCc-------------
Confidence 5678999999999998853 34899999987765432111 0013568999999998865322
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE 252 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp 252 (732)
.-|-+|.+. +..+|.....+..|+..++|.|
T Consensus 354 ------DLVtVwSf~----erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 354 ------DLVTVWSFE----ERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred ------ceEEEEEec----cceEEEeccccccceeeEeecc
Confidence 223344443 2335555555566777777765
No 316
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=97.17 E-value=0.0045 Score=65.96 Aligned_cols=117 Identities=13% Similarity=0.111 Sum_probs=69.5
Q ss_pred EEEEeEEECC-CCcEEEEEEeccCCceEEEEEEECCCCce--e---cc---cccceeeeeEEEEeCCcEEEEEEecCCCC
Q 004766 132 AALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIEDQIV--E---AD---ALSWFKFSSIAWTHDSKGFFYSRYPAPKE 202 (732)
Q Consensus 132 ~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~~g~~--~---~~---~~~~~~~~~~~WspDg~~l~y~~~~~~~~ 202 (732)
..+..+.|.| |-.+||...+ ..+|.+|.+..+.. . ++ ++...++.++.|.|=-.-++.+
T Consensus 628 t~vtDl~WdPFD~~rLAVa~d-----dg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~------- 695 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATD-----DGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAV------- 695 (1012)
T ss_pred ceeeecccCCCChHHeeeccc-----CceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhh-------
Confidence 4577888988 7788887753 34778887765431 1 11 1122233455555422111111
Q ss_pred CCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCC
Q 004766 203 GKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALP 280 (732)
Q Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~ 280 (732)
+.+...|.+|++.+....-. +.+ +...+++++|||||+.++-+..++ .|.++....++
T Consensus 696 -----------asyd~Ti~lWDl~~~~~~~~--l~g--HtdqIf~~AWSpdGr~~AtVcKDg-----~~rVy~Prs~e 753 (1012)
T KOG1445|consen 696 -----------ASYDSTIELWDLANAKLYSR--LVG--HTDQIFGIAWSPDGRRIATVCKDG-----TLRVYEPRSRE 753 (1012)
T ss_pred -----------hhccceeeeeehhhhhhhhe--ecc--CcCceeEEEECCCCcceeeeecCc-----eEEEeCCCCCC
Confidence 34667899999987643322 222 233567999999999998776543 36777765543
No 317
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=97.16 E-value=0.011 Score=57.93 Aligned_cols=196 Identities=9% Similarity=0.104 Sum_probs=108.1
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee----cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE----ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~----~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
..+..++|.|.|.+|+... +..+++++|++|-+.. ++.........+.+|+.|+ ||.+..
T Consensus 217 ~~vrsiSfHPsGefllvgT-----dHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~-lYvTaS---------- 280 (430)
T KOG0640|consen 217 EPVRSISFHPSGEFLLVGT-----DHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGS-LYVTAS---------- 280 (430)
T ss_pred ceeeeEeecCCCceEEEec-----CCCceeEEeccceeEeeecCcccccccceeEEEecCCcc-EEEEec----------
Confidence 4577899999999999664 4568999999987632 2222112247788998886 555432
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEE--ecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCW--KDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG 285 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~--~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 285 (732)
....|.+|+--++ .+|- ....+..-+.+..|+.|||||+-+.. .+-+++|.+.++.
T Consensus 281 --------kDG~IklwDGVS~----rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~-----DS~vkLWEi~t~R----- 338 (430)
T KOG0640|consen 281 --------KDGAIKLWDGVSN----RCVRTIGNAHGGSEVCSAVFTKNGKYILSSGK-----DSTVKLWEISTGR----- 338 (430)
T ss_pred --------cCCcEEeeccccH----HHHHHHHhhcCCceeeeEEEccCCeEEeecCC-----cceeeeeeecCCc-----
Confidence 2224666663222 1221 11122234578899999999975433 3457777777642
Q ss_pred ccccCCCCCcEEeee----cccc--eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec
Q 004766 286 FKKRDGLLPFVKLID----GFDA--QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN 359 (732)
Q Consensus 286 ~~~~~~~~~~~~l~~----~~~~--~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~ 359 (732)
++...+. +... .-..|.+..+.++|. +.+ ...|+.+|..+.. ...+.+-..+..+..+.-++
T Consensus 339 --------~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~p--DEa-s~slcsWdaRtad-r~~l~slgHn~a~R~i~HSP 406 (430)
T KOG0640|consen 339 --------MLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFP--DEA-SNSLCSWDARTAD-RVALLSLGHNGAVRWIVHSP 406 (430)
T ss_pred --------eEEEEecCCcccchhhhhhhhhcCccceEEcc--ccc-cCceeeccccchh-hhhhcccCCCCCceEEEeCC
Confidence 1222211 0000 011344444444332 222 3468888877665 23344433334555565566
Q ss_pred CCEEEEEEecCCeeEEEE
Q 004766 360 LNQMIVSYLSDVKYVLQI 377 (732)
Q Consensus 360 ~~~l~~~~~~~g~~~l~~ 377 (732)
.+-.+++...|-+-+.|.
T Consensus 407 ~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 407 VEPAFMTCSDDFRARFWY 424 (430)
T ss_pred CCCceeeecccceeeeee
Confidence 555666777665444443
No 318
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.14 E-value=0.03 Score=53.51 Aligned_cols=236 Identities=12% Similarity=0.132 Sum_probs=125.5
Q ss_pred eEEECC--CCcEEEEEEec----cCCceEEEEEEECCCCceec-----ccccceeeeeEEEEeCCcEEEEEEecCCCCCC
Q 004766 136 KVSVSE--DAKYLAYALSY----SGSDWATIKLMRIEDQIVEA-----DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGK 204 (732)
Q Consensus 136 ~~~~SP--DG~~la~~~~~----~G~e~~~i~v~dl~~g~~~~-----~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~ 204 (732)
+++||| ++ +||.+... .|+ ..|+|.++..+.-+. ++.+ ....++||+...-++++...
T Consensus 13 svqfSPf~~n-rLavAt~q~yGl~G~--G~L~ile~~~~~gi~e~~s~d~~D--~LfdV~Wse~~e~~~~~a~G------ 81 (311)
T KOG0277|consen 13 SVQFSPFVEN-RLAVATAQHYGLAGN--GRLFILEVTDPKGIQECQSYDTED--GLFDVAWSENHENQVIAASG------ 81 (311)
T ss_pred eeEecccccc-hhheeehhhcccccC--ceEEEEecCCCCCeEEEEeeeccc--ceeEeeecCCCcceEEEEec------
Confidence 567888 44 45544321 244 489999996443222 1111 13689999988777777532
Q ss_pred CCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 205 DMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
...+.+++++-+ +..+.+|.+.. .-+.++.|++-.+++++.++-.. +-+||..+...
T Consensus 82 ------------DGSLrl~d~~~~-s~Pi~~~kEH~--~EV~Svdwn~~~r~~~ltsSWD~--TiKLW~~~r~~------ 138 (311)
T KOG0277|consen 82 ------------DGSLRLFDLTMP-SKPIHKFKEHK--REVYSVDWNTVRRRIFLTSSWDG--TIKLWDPNRPN------ 138 (311)
T ss_pred ------------CceEEEeccCCC-CcchhHHHhhh--hheEEeccccccceeEEeeccCC--ceEeecCCCCc------
Confidence 224677775433 33344554432 33568899987777776664332 45555443322
Q ss_pred cccccCCCCCcEEeeecccceEE-EEEec-CCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CC
Q 004766 285 GFKKRDGLLPFVKLIDGFDAQYE-VIAND-DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LN 361 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~~~-~~s~d-g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~ 361 (732)
.+..........+. .|+|. ++.+...+. +..+-.+|++.+.....+-.+. ..+-...|++ +.
T Consensus 139 ---------Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sg----d~~l~lwdvr~~gk~~~i~ah~--~Eil~cdw~ky~~ 203 (311)
T KOG0277|consen 139 ---------SVQTFNGHNSCIYQAAFSPHIPNLFASASG----DGTLRLWDVRSPGKFMSIEAHN--SEILCCDWSKYNH 203 (311)
T ss_pred ---------ceEeecCCccEEEEEecCCCCCCeEEEccC----CceEEEEEecCCCceeEEEecc--ceeEeecccccCC
Confidence 13333222222333 48884 444433332 2345556665544222222232 3455667776 46
Q ss_pred EEEEEEecCCeeEEEEEeCCCCc-eeeecccccceeeEeecccCCcEEEEEEecCCCCceEEE
Q 004766 362 QMIVSYLSDVKYVLQIRDLKNGS-LLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQ 423 (732)
Q Consensus 362 ~l~~~~~~~g~~~l~~~d~~~g~-~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~ 423 (732)
.++++...| ..|+.||+.+=+ .+-+|..+...|..+.+||....++.+. |...-.+++.
T Consensus 204 ~vl~Tg~vd--~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSa-sYDmT~riw~ 263 (311)
T KOG0277|consen 204 NVLATGGVD--NLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASA-SYDMTVRIWD 263 (311)
T ss_pred cEEEecCCC--ceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhc-cccceEEecc
Confidence 788887777 478899986322 1223332344566777777665555443 3333334443
No 319
>COG3150 Predicted esterase [General function prediction only]
Probab=97.14 E-value=0.006 Score=54.55 Aligned_cols=138 Identities=12% Similarity=-0.015 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc----cccccccCCCCCccc--cccC
Q 004766 542 FDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM----DMLRYHKFTIGHAWV--SDFG 615 (732)
Q Consensus 542 ~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~----d~~~~~~~~~~~~~~--~~~g 615 (732)
....++-++-++.+. .|+ .++|.|.|.|||.+.++..+. -+++++. .|.+ +|..+.. ..+.|+ .+|-
T Consensus 42 p~~a~~ele~~i~~~-~~~-~p~ivGssLGGY~At~l~~~~--Girav~~-NPav~P~e~l~gylg--~~en~ytg~~y~ 114 (191)
T COG3150 42 PQQALKELEKAVQEL-GDE-SPLIVGSSLGGYYATWLGFLC--GIRAVVF-NPAVRPYELLTGYLG--RPENPYTGQEYV 114 (191)
T ss_pred HHHHHHHHHHHHHHc-CCC-CceEEeecchHHHHHHHHHHh--CChhhhc-CCCcCchhhhhhhcC--CCCCCCCcceEE
Confidence 345555566655543 232 499999999999999998874 3455543 3332 2222211 111111 1221
Q ss_pred CCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCC-CCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEE
Q 004766 616 CSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADH-DDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIG 694 (732)
Q Consensus 616 ~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~-D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 694 (732)
- .+...+.+.. .+++. ...|-.|++-... |....+.++.. .++. ...
T Consensus 115 l--e~~hI~~l~~----~~~~~---------l~~p~~~~lL~qtgDEvLDyr~a~a---~y~~--------------~~~ 162 (191)
T COG3150 115 L--ESRHIATLCV----LQFRE---------LNRPRCLVLLSQTGDEVLDYRQAVA---YYHP--------------CYE 162 (191)
T ss_pred e--ehhhHHHHHH----hhccc---------cCCCcEEEeecccccHHHHHHHHHH---Hhhh--------------hhh
Confidence 0 1111211221 22333 1456677777666 87776655444 3443 244
Q ss_pred EEeCCCCCCCCCchHHHHHHHHHHHHHH
Q 004766 695 RIERKAGHGVGLPTQKMIDEAADRYGFM 722 (732)
Q Consensus 695 ~~~~~~gH~~~~~~~~~~~~~~~~~~fl 722 (732)
.+..|+.|+|..- ...+..+.+|+
T Consensus 163 ~V~dgg~H~F~~f----~~~l~~i~aF~ 186 (191)
T COG3150 163 IVWDGGDHKFKGF----SRHLQRIKAFK 186 (191)
T ss_pred eeecCCCccccch----HHhHHHHHHHh
Confidence 5667899998652 34556777776
No 320
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.12 E-value=0.6 Score=51.53 Aligned_cols=252 Identities=14% Similarity=0.058 Sum_probs=133.2
Q ss_pred CCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC--
Q 004766 90 GNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED-- 167 (732)
Q Consensus 90 g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~-- 167 (732)
+..+.|....-+.+|+.|-+++..+++. +.|. ++ -...++.|.+||+.+-|+.........+++-..+.+
T Consensus 140 ~~~la~s~D~~G~e~y~lr~kdL~tg~~--~~d~--i~----~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~gt~~ 211 (682)
T COG1770 140 HNLLAYSVDVLGDEQYTLRFKDLATGEE--LPDE--IT----NTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPG 211 (682)
T ss_pred CceEEEEEecccccEEEEEEEecccccc--cchh--hc----ccccceEEecCCCeEEEEEEcCCCCcceEEEEecCCCC
Confidence 3344454444455556565555544321 1111 11 013478999999999999987766566777776655
Q ss_pred Cc--eecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeE
Q 004766 168 QI--VEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYI 245 (732)
Q Consensus 168 g~--~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~ 245 (732)
.. .+=+.....-+-++.=|.+.++|++...+ ....++++.+...+..+-.++...+.+-.+
T Consensus 212 ~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~----------------~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY- 274 (682)
T COG1770 212 SSDELVYEEKDDRFFLSVGRSRSEAYIVISLGS----------------HITSEVRLLDADDPEAEPKVVLPRENGVEY- 274 (682)
T ss_pred CcceEEEEcCCCcEEEEeeeccCCceEEEEcCC----------------CcceeEEEEecCCCCCceEEEEEcCCCcEE-
Confidence 21 11111111112334445556666665422 233478888887766655555544432222
Q ss_pred EEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCC
Q 004766 246 FSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDA 324 (732)
Q Consensus 246 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~ 324 (732)
....-|.+.++.++... .+..|+...+... ...|+.++..... ....++--.++|++....+
T Consensus 275 ---~~eh~~d~f~i~sN~~g-knf~l~~ap~~~~------------~~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~~- 337 (682)
T COG1770 275 ---SVEHGGDRFYILSNADG-KNFKLVRAPVSAD------------KSNWRELIPHREDVRLEGVDLFADHLVLLERQE- 337 (682)
T ss_pred ---eeeecCcEEEEEecCCC-cceEEEEccCCCC------------hhcCeeeeccCCCceeeeeeeeccEEEEEeccc-
Confidence 23344777777776555 4566776666211 2336666654332 2233444466777665554
Q ss_pred CCceEEEEeCCCCCCceEeccCCCCCceeEEEEec---CCEEEEEEecCC-eeEEEEEeCCCCce
Q 004766 325 PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN---LNQMIVSYLSDV-KYVLQIRDLKNGSL 385 (732)
Q Consensus 325 ~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~---~~~l~~~~~~~g-~~~l~~~d~~~g~~ 385 (732)
...+|++.+.++++. ..+.-.++ .......... .+.|-+.+..-. ..+++-+|+++++.
T Consensus 338 glp~v~v~~~~~~~~-~~i~f~~~-ay~~~l~~~~e~~s~~lR~~ysS~ttP~~~~~~dm~t~er 400 (682)
T COG1770 338 GLPRVVVRDRKTGEE-RGIAFDDE-AYSAGLSGNPEFDSDRLRYSYSSMTTPATLFDYDMATGER 400 (682)
T ss_pred CCceEEEEecCCCce-eeEEecch-hhhccccCCCCCCCccEEEEeecccccceeEEeeccCCcE
Confidence 366788888877652 22221111 1111111111 145555555443 45899999998875
No 321
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=97.09 E-value=0.033 Score=58.21 Aligned_cols=108 Identities=11% Similarity=0.010 Sum_probs=70.7
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSN 215 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~ 215 (732)
...|.|.| .||... -...+.|+|.++...++....+...+-+++||||..|+..+.++
T Consensus 412 ~~~fhpsg-~va~Gt-----~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~---------------- 469 (626)
T KOG2106|consen 412 CADFHPSG-VVAVGT-----ATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDN---------------- 469 (626)
T ss_pred EeeccCcc-eEEEee-----ccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCC----------------
Confidence 45688889 677553 23478899999977666554454567899999999999986543
Q ss_pred cccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEe
Q 004766 216 LYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCD 275 (732)
Q Consensus 216 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d 275 (732)
.||++.+..+... ...+..... .++..+.||+|++++.-.+ . ..+|..+.
T Consensus 470 ---~iyiy~Vs~~g~~-y~r~~k~~g-s~ithLDwS~Ds~~~~~~S--~---d~eiLyW~ 519 (626)
T KOG2106|consen 470 ---HIYIYRVSANGRK-YSRVGKCSG-SPITHLDWSSDSQFLVSNS--G---DYEILYWK 519 (626)
T ss_pred ---eEEEEEECCCCcE-EEEeeeecC-ceeEEeeecCCCceEEecc--C---ceEEEEEc
Confidence 4677766544322 111211122 5677899999999986443 2 24565563
No 322
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.08 E-value=0.0036 Score=55.88 Aligned_cols=126 Identities=15% Similarity=0.137 Sum_probs=79.6
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccC-CCCCccccccCCCCCHHHHH
Q 004766 546 ISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKF-TIGHAWVSDFGCSEEEEEFY 624 (732)
Q Consensus 546 ~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~-~~~~~~~~~~g~p~~~~~~~ 624 (732)
.+--.|++++.. |.+..+.|.|+||+.++....++|++|..+|+.+|+.|...+..- -.+. .-|.
T Consensus 88 ~AyerYv~eEal--pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yyddD---v~yn--------- 153 (227)
T COG4947 88 RAYERYVIEEAL--PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDDD---VYYN--------- 153 (227)
T ss_pred HHHHHHHHHhhc--CCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccCc---eeec---------
Confidence 344557777643 678899999999999999999999999999999999998754420 0000 0111
Q ss_pred HHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCC
Q 004766 625 WLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGH 702 (732)
Q Consensus 625 ~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH 702 (732)
||.+.+....+--.-......-+.+++|+.|+..+ +..++.+.|.+. .+|..+.+..+-.|
T Consensus 154 -----sP~dylpg~~dp~~l~rlr~~~~vfc~G~e~~~L~--~~~~L~~~l~dK----------qipaw~~~WggvaH 214 (227)
T COG4947 154 -----SPSDYLPGLADPFRLERLRRIDMVFCIGDEDPFLD--NNQHLSRLLSDK----------QIPAWMHVWGGVAH 214 (227)
T ss_pred -----ChhhhccCCcChHHHHHHhhccEEEEecCcccccc--chHHHHHHhccc----------cccHHHHHhccccc
Confidence 33332222100000000012367888999988766 556777777765 67777777654444
No 323
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.06 E-value=0.0041 Score=71.04 Aligned_cols=245 Identities=13% Similarity=0.036 Sum_probs=140.7
Q ss_pred EEEeEEECCCCcE----EEEEEeccCCceEEEEEEECCC---Cc---eec-ccccceeeeeEEEEeCCcEEEEEEecCCC
Q 004766 133 ALIKVSVSEDAKY----LAYALSYSGSDWATIKLMRIED---QI---VEA-DALSWFKFSSIAWTHDSKGFFYSRYPAPK 201 (732)
Q Consensus 133 ~~~~~~~SPDG~~----la~~~~~~G~e~~~i~v~dl~~---g~---~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~ 201 (732)
.+..+.|++-|.. || +|.|...|-+||... +. .+. .......+.++.|.+...-++-+.
T Consensus 66 rF~kL~W~~~g~~~~GlIa-----GG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASG----- 135 (1049)
T KOG0307|consen 66 RFNKLAWGSYGSHSHGLIA-----GGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASG----- 135 (1049)
T ss_pred cceeeeecccCCCccceee-----ccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeecc-----
Confidence 3557889998887 44 677778899998754 22 111 111112245688888876343321
Q ss_pred CCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCC
Q 004766 202 EGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPE 281 (732)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 281 (732)
....+|++||+...... .-+.....+..+..++|...-.+|+.+.+.. ...-++|+...
T Consensus 136 -------------a~~geI~iWDlnn~~tP--~~~~~~~~~~eI~~lsWNrkvqhILAS~s~s----g~~~iWDlr~~-- 194 (1049)
T KOG0307|consen 136 -------------ADDGEILIWDLNKPETP--FTPGSQAPPSEIKCLSWNRKVSHILASGSPS----GRAVIWDLRKK-- 194 (1049)
T ss_pred -------------CCCCcEEEeccCCcCCC--CCCCCCCCcccceEeccchhhhHHhhccCCC----CCceeccccCC--
Confidence 22346999999753221 1110111122344677777666765554322 34556787652
Q ss_pred CcccccccCCCCCcEEeeeccc---ceEEEEEecCCe-EEEEeCCCCCCceEEEEeCCCCC-CceEeccCCCCCceeEEE
Q 004766 282 GLEGFKKRDGLLPFVKLIDGFD---AQYEVIANDDTV-FTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEAERDVLESAT 356 (732)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~---~~~~~~s~dg~~-l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~~~ 356 (732)
.++..+..... .....|.|++.. +++.++.+ ..--|-.+|+.-.. ..+++..|. .-+-++.
T Consensus 195 -----------~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd-~~PviqlWDlR~assP~k~~~~H~--~Gilsls 260 (1049)
T KOG0307|consen 195 -----------KPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDD-SAPVIQLWDLRFASSPLKILEGHQ--RGILSLS 260 (1049)
T ss_pred -----------CcccccccCCCccceeeeeeCCCCceeeeeecCCC-CCceeEeecccccCCchhhhcccc--cceeeec
Confidence 12333333222 122358897654 44444443 34456677765433 234443444 4466788
Q ss_pred Eec-CCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEE
Q 004766 357 AVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCN 425 (732)
Q Consensus 357 ~~~-~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d 425 (732)
|.. |.++++++..| .++..|+.++|+.+..+......+..+.+.+...- +|+.+++...-.||-+-
T Consensus 261 Wc~~D~~lllSsgkD--~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~-~~A~asfdgkI~I~sl~ 327 (1049)
T KOG0307|consen 261 WCPQDPRLLLSSGKD--NRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPS-VMAAASFDGKISIYSLQ 327 (1049)
T ss_pred cCCCCchhhhcccCC--CCeeEecCCCceEeeecCCCCcceeeeeecCCCcc-hhhhheeccceeeeeee
Confidence 886 45889998888 48999999999987777654334556667665552 45667777766666554
No 324
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=97.05 E-value=0.065 Score=52.60 Aligned_cols=196 Identities=12% Similarity=0.094 Sum_probs=100.5
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC-Cceecccc--cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED-QIVEADAL--SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~-g~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
+|+.++|||.-..++... +=..++++|+++. |...+... .....-..+||.||..+|....+.
T Consensus 29 sIS~l~FSP~~~~~~~A~----SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk---------- 94 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAAG----SWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDK---------- 94 (347)
T ss_pred chheeEeccccCceEEec----ccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCC----------
Confidence 477999999443333332 2235899999875 45433211 111235789999998887765443
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
++.+|+|.+++...+-.. + .-+-.+.|-+...+-.+... .. ...|-.+|....
T Consensus 95 ---------~~k~wDL~S~Q~~~v~~H---d--~pvkt~~wv~~~~~~cl~TG-SW--DKTlKfWD~R~~---------- 147 (347)
T KOG0647|consen 95 ---------QAKLWDLASGQVSQVAAH---D--APVKTCHWVPGMNYQCLVTG-SW--DKTLKFWDTRSS---------- 147 (347)
T ss_pred ---------ceEEEEccCCCeeeeeec---c--cceeEEEEecCCCcceeEec-cc--ccceeecccCCC----------
Confidence 578899998865433222 1 22335666655553222211 11 234777786642
Q ss_pred CCCCCcEEeeecccceEEEEEecC-CeEEEEeCCCCCCceEEEEeCCCCC-CceEeccCCCCCceeEEEEecCCEEEEEE
Q 004766 290 DGLLPFVKLIDGFDAQYEVIANDD-TVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEAERDVLESATAVNLNQMIVSY 367 (732)
Q Consensus 290 ~~~~~~~~l~~~~~~~~~~~s~dg-~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~~~~~~~~~l~~~~ 367 (732)
.++..+. -.+..|. -|- .-+++++.. ...|..++|+++. ..+..-.+ -...+..++.+.++..++..
T Consensus 148 ---~pv~t~~-LPeRvYa---~Dv~~pm~vVata---~r~i~vynL~n~~te~k~~~Sp-Lk~Q~R~va~f~d~~~~alG 216 (347)
T KOG0647|consen 148 ---NPVATLQ-LPERVYA---ADVLYPMAVVATA---ERHIAVYNLENPPTEFKRIESP-LKWQTRCVACFQDKDGFALG 216 (347)
T ss_pred ---Ceeeeee-ccceeee---hhccCceeEEEec---CCcEEEEEcCCCcchhhhhcCc-ccceeeEEEEEecCCceEee
Confidence 1121111 1111121 111 122222221 2248888886653 23333222 24667788888765455555
Q ss_pred ecCCeeEEEEEeC
Q 004766 368 LSDVKYVLQIRDL 380 (732)
Q Consensus 368 ~~~g~~~l~~~d~ 380 (732)
.-.|+-.|.-+|.
T Consensus 217 siEGrv~iq~id~ 229 (347)
T KOG0647|consen 217 SIEGRVAIQYIDD 229 (347)
T ss_pred eecceEEEEecCC
Confidence 6666555554443
No 325
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=97.04 E-value=0.18 Score=51.42 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=77.5
Q ss_pred EEEEeEEECCCCcE-EEEEEeccCCceEEEEEEECCCCcee-c-------ccccceeeeeEEEEeCCcEEEEEEecCCCC
Q 004766 132 AALIKVSVSEDAKY-LAYALSYSGSDWATIKLMRIEDQIVE-A-------DALSWFKFSSIAWTHDSKGFFYSRYPAPKE 202 (732)
Q Consensus 132 ~~~~~~~~SPDG~~-la~~~~~~G~e~~~i~v~dl~~g~~~-~-------~~~~~~~~~~~~WspDg~~l~y~~~~~~~~ 202 (732)
..+-.+.|+|-... || +|+|..+|.||.+..+... . .....-+.+.++|.|--.-++.+
T Consensus 82 ~~vLDi~w~PfnD~vIA-----SgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLls------- 149 (472)
T KOG0303|consen 82 APVLDIDWCPFNDCVIA-----SGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLS------- 149 (472)
T ss_pred ccccccccCccCCceee-----cCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhh-------
Confidence 44567789996554 44 5788899999998654311 1 11111235778999876666655
Q ss_pred CCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCC
Q 004766 203 GKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
++..+.|..|++||+.. ++ +.. ++..+.+++|+-||.+++-... ...|.++|..++
T Consensus 150 -----------ag~Dn~v~iWnv~tgea---li-~l~-hpd~i~S~sfn~dGs~l~Ttck-----DKkvRv~dpr~~ 205 (472)
T KOG0303|consen 150 -----------AGSDNTVSIWNVGTGEA---LI-TLD-HPDMVYSMSFNRDGSLLCTTCK-----DKKVRVIDPRRG 205 (472)
T ss_pred -----------ccCCceEEEEeccCCce---ee-ecC-CCCeEEEEEeccCCceeeeecc-----cceeEEEcCCCC
Confidence 34567899999999853 22 222 5667889999999999876553 245888887764
No 326
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.03 E-value=0.00084 Score=69.72 Aligned_cols=113 Identities=12% Similarity=0.059 Sum_probs=64.1
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhH-HHHHHh--cCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHH
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSR-TILMRH--LGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLIS 554 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~-~~~l~~--~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 554 (732)
+...|++|++||..+......+...+ ..++.. .++.|+++|...+... .+..+... -...-.-+...+..|.+
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n--~~~vg~~la~~l~~L~~ 143 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVAN--TRLVGRQLAKFLSFLIN 143 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhh--HHHHHHHHHHHHHHHHh
Confidence 56789999999987766334444433 456665 5899999998643321 12222111 01112334445777775
Q ss_pred cCCCCCCcEEEEecChhHHHHHHHHhhCCC--eeeEEEEcCC
Q 004766 555 AGYTQSRKLCIEGGSNGGLLVGACINQRPD--LFGCALAHVG 594 (732)
Q Consensus 555 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~--~f~a~v~~~p 594 (732)
...+++++|-|+|||.|+.+++.+...... .+..+...-|
T Consensus 144 ~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDP 185 (331)
T PF00151_consen 144 NFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDP 185 (331)
T ss_dssp HH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-
T ss_pred hcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCc
Confidence 555789999999999999999999887554 4555544433
No 327
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=97.01 E-value=0.041 Score=62.76 Aligned_cols=84 Identities=11% Similarity=0.172 Sum_probs=49.4
Q ss_pred EEEEEeCCCCCceEE-eCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccC-CceEEEEEEECCCCc--eecccccceeee
Q 004766 106 VLYVQDSLDAKAKVL-LDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSG-SDWATIKLMRIEDQI--VEADALSWFKFS 181 (732)
Q Consensus 106 ~l~~r~~~~~~~~~l-~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G-~e~~~i~v~dl~~g~--~~~~~~~~~~~~ 181 (732)
.|.+.+..+..++++ +..+ ..+-.|.|||||++|||.++..+ +....|||.||.+.. .+....+++ .
T Consensus 330 ~L~~~D~dG~n~~~ve~~~~-------~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~a--a 400 (912)
T TIGR02171 330 NLAYIDYTKGASRAVEIEDT-------ISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENA--A 400 (912)
T ss_pred eEEEEecCCCCceEEEecCC-------CceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccc--c
Confidence 355555444455544 3322 22568999999999999555554 123679999998643 333333443 3
Q ss_pred eEEE--EeCCc-EEEEEEec
Q 004766 182 SIAW--THDSK-GFFYSRYP 198 (732)
Q Consensus 182 ~~~W--spDg~-~l~y~~~~ 198 (732)
-+.| ..+|+ .|+|++..
T Consensus 401 iprwrv~e~gdt~ivyv~~a 420 (912)
T TIGR02171 401 IPRWRVLENGDTVIVYVSDA 420 (912)
T ss_pred ccceEecCCCCeEEEEEcCC
Confidence 3444 55554 56777653
No 328
>PRK02888 nitrous-oxide reductase; Validated
Probab=96.99 E-value=0.096 Score=57.85 Aligned_cols=195 Identities=11% Similarity=0.048 Sum_probs=99.8
Q ss_pred ECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCccc
Q 004766 139 VSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYH 218 (732)
Q Consensus 139 ~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~ 218 (732)
++|||+.+- . .......+.++|.++-+......-+.+.....++|||++++.++.+.. ...
T Consensus 200 lpnDGk~l~-~---~~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE---------------~G~ 260 (635)
T PRK02888 200 LPNDGKDLD-D---PKKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSE---------------EGV 260 (635)
T ss_pred cCCCCCEee-c---ccceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcc---------------cCc
Confidence 789999762 2 123345788899998765432222223467899999999998875431 122
Q ss_pred EEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEE-
Q 004766 219 EFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVK- 297 (732)
Q Consensus 219 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~- 297 (732)
.+...+.++ .....+|.... -..+.+||++..+. .+.+-++|..+..+. ......
T Consensus 261 tl~em~a~e--~d~~vvfni~~------iea~vkdGK~~~V~-------gn~V~VID~~t~~~~---------~~~v~~y 316 (635)
T PRK02888 261 TLAEMMAAE--RDWVVVFNIAR------IEEAVKAGKFKTIG-------GSKVPVVDGRKAANA---------GSALTRY 316 (635)
T ss_pred ceeeecccc--CceEEEEchHH------HHHhhhCCCEEEEC-------CCEEEEEECCccccC---------CcceEEE
Confidence 233333222 12222332110 12457899987752 245788887751000 011222
Q ss_pred eeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCC-------c-eEeccCC--CCCceeEEEEecCCEEEEEE
Q 004766 298 LIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND-------W-FEVIPEA--ERDVLESATAVNLNQMIVSY 367 (732)
Q Consensus 298 l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-------~-~~l~~~~--~~~~l~~~~~~~~~~l~~~~ 367 (732)
+..+....-..+||||+++|+ ++... ..+-.+|+++... . ..++.+- ....+ ...+.+++..|.+.
T Consensus 317 IPVGKsPHGV~vSPDGkylyV-anklS--~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPL-HTaFDg~G~aytsl 392 (635)
T PRK02888 317 VPVPKNPHGVNTSPDGKYFIA-NGKLS--PTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPL-HTAFDGRGNAYTTL 392 (635)
T ss_pred EECCCCccceEECCCCCEEEE-eCCCC--CcEEEEEChhhhhhhhccCCccceEEEeeccCCCcc-eEEECCCCCEEEeE
Confidence 222222111248999998885 44433 3466677765331 0 1111111 00111 12344445566655
Q ss_pred ecCCeeEEEEEeCCC
Q 004766 368 LSDVKYVLQIRDLKN 382 (732)
Q Consensus 368 ~~~g~~~l~~~d~~~ 382 (732)
--+ ++|..|++++
T Consensus 393 f~d--sqv~kwn~~~ 405 (635)
T PRK02888 393 FLD--SQIVKWNIEA 405 (635)
T ss_pred eec--ceeEEEehHH
Confidence 555 6899999864
No 329
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.98 E-value=0.11 Score=51.54 Aligned_cols=207 Identities=9% Similarity=-0.008 Sum_probs=102.4
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-cccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
+++++|.||.+.|+.+.+.. ..|+.++++ |+.+.. ...+ .++-++++.-+++ ++.+.
T Consensus 24 ~SGLTy~pd~~tLfaV~d~~----~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~-~vl~~--------------- 82 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAVQDEP----GEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGR-YVLSE--------------- 82 (248)
T ss_dssp EEEEEEETTTTEEEEEETTT----TEEEEEETT---EEEEEE-SS-SSEEEEEE-STTE-EEEEE---------------
T ss_pred ccccEEcCCCCeEEEEECCC----CEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCE-EEEEE---------------
Confidence 78999999999887776543 368889975 665432 2222 2356788986664 44432
Q ss_pred ccCCcccEEEEEECCCCCCC----CeEEEe--cC--CCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCc
Q 004766 212 TDSNLYHEFYYHFLGTKQSE----DILCWK--DP--EHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGL 283 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~----~~~v~~--~~--~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 283 (732)
.+.++++.+++...... +..-++ .. .+. -+.+++|+|.++.+++...+.. ..||-++.......+
T Consensus 83 ---Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~-G~EGla~D~~~~~L~v~kE~~P---~~l~~~~~~~~~~~~ 155 (248)
T PF06977_consen 83 ---ERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNK-GFEGLAYDPKTNRLFVAKERKP---KRLYEVNGFPGGFDL 155 (248)
T ss_dssp ---TTTTEEEEEEE----TT--EEEEEEEE---S---SS---EEEEEETTTTEEEEEEESSS---EEEEEEESTT-SS--
T ss_pred ---cCCCcEEEEEEeccccccchhhceEEecccccCCCc-ceEEEEEcCCCCEEEEEeCCCC---hhhEEEccccCccce
Confidence 24457777777432211 101111 11 222 2468999999888877654433 567777752111000
Q ss_pred ccccccCCCCCcEE-eeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-CceEeccCC-----CCCceeEEE
Q 004766 284 EGFKKRDGLLPFVK-LIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEA-----ERDVLESAT 356 (732)
Q Consensus 284 ~~~~~~~~~~~~~~-l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~-----~~~~l~~~~ 356 (732)
... ....+.. ...-.+.+-..+.|..++||+++... ..|..+|.++.- ....|.... .-..-++++
T Consensus 156 ~~~----~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es---~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa 228 (248)
T PF06977_consen 156 FVS----DDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDES---RLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIA 228 (248)
T ss_dssp EEE----E-HHHH-HT--SS---EEEEETTTTEEEEEETTT---TEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEE
T ss_pred eec----cccccccccceeccccceEEcCCCCeEEEEECCC---CeEEEECCCCCEEEEEEeCCcccCcccccCCccEEE
Confidence 000 0000000 00011111223678888999998864 368888855432 122333211 013467899
Q ss_pred EecCCEEEEEEecCCeeEEEEE
Q 004766 357 AVNLNQMIVSYLSDVKYVLQIR 378 (732)
Q Consensus 357 ~~~~~~l~~~~~~~g~~~l~~~ 378 (732)
+.+++.||+....+ .+|++
T Consensus 229 ~d~~G~LYIvsEpN---lfy~f 247 (248)
T PF06977_consen 229 FDPDGNLYIVSEPN---LFYRF 247 (248)
T ss_dssp E-TT--EEEEETTT---EEEEE
T ss_pred ECCCCCEEEEcCCc---eEEEe
Confidence 98878888887655 55654
No 330
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.93 E-value=0.021 Score=53.52 Aligned_cols=107 Identities=13% Similarity=0.133 Sum_probs=75.9
Q ss_pred EEEEEcCCCCccCC-CCcChhHHHHHHhcCcEEEEEcccCCC-CCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 483 CLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGG-EYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 483 ~vv~~hG~~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~g-~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
..|..-||.+.... -.|-......|++.+|..+.+-.|-+- +||.-- . ....+|+..++++++-.++.
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~s-------l-k~D~edl~~l~~Hi~~~~fS-- 106 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFS-------L-KDDVEDLKCLLEHIQLCGFS-- 106 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccc-------c-cccHHHHHHHHHHhhccCcc--
Confidence 44444466665433 233444556677799999999998653 244321 1 23568999999999888764
Q ss_pred CcEEEEecChhHHHHHHHHhh--CCCeeeEEEEcCCccccc
Q 004766 561 RKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGVMDML 599 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p~~d~~ 599 (732)
..|+++|||-|.-=++.++++ -|...+|+|+++|+.|..
T Consensus 107 t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 107 TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred cceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 389999999999888887754 255689999999999864
No 331
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=96.93 E-value=0.084 Score=57.89 Aligned_cols=237 Identities=14% Similarity=0.167 Sum_probs=124.4
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeC---Cc-EEEEEEecCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHD---SK-GFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspD---g~-~l~y~~~~~~~~~~~~~ 207 (732)
-.+.++.+++|+.-+.++. .+ ..+.|||+..-+.+.........-+.+..++ ++ ..+++..
T Consensus 193 S~vtsL~~~~d~~~~ls~~----RD-kvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG---------- 257 (775)
T KOG0319|consen 193 SAVTSLAFSEDSLELLSVG----RD-KVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAG---------- 257 (775)
T ss_pred hheeeeeeccCCceEEEec----cC-cEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEec----------
Confidence 4578899999998877663 22 5899999965543211111001133444444 33 2444432
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEe--cCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWK--DPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG 285 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 285 (732)
....+.+++..++.. ++. .++.+..........+++.+++.. ...++++|.++..
T Consensus 258 --------~~g~~~~~d~es~~~----~~~~~~~~~~e~~~~~~~~~~~~~l~vta------eQnl~l~d~~~l~----- 314 (775)
T KOG0319|consen 258 --------GSGVVQYWDSESGKC----VYKQRQSDSEEIDHLLAIESMSQLLLVTA------EQNLFLYDEDELT----- 314 (775)
T ss_pred --------CCceEEEEecccchh----hhhhccCCchhhhcceeccccCceEEEEc------cceEEEEEccccE-----
Confidence 222355555544321 110 011111222334445666665543 2457888876632
Q ss_pred ccccCCCCCcEEeeecccceE---EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCE
Q 004766 286 FKKRDGLLPFVKLIDGFDAQY---EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ 362 (732)
Q Consensus 286 ~~~~~~~~~~~~l~~~~~~~~---~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 362 (732)
..+.++ ++..++ .++.|+.+++++.+|. +..++| ++.+.. .. +++.-. ..+-++.....+.
T Consensus 315 --------i~k~iv-G~ndEI~Dm~~lG~e~~~laVATNs--~~lr~y--~~~~~~-c~-ii~GH~-e~vlSL~~~~~g~ 378 (775)
T KOG0319|consen 315 --------IVKQIV-GYNDEILDMKFLGPEESHLAVATNS--PELRLY--TLPTSY-CQ-IIPGHT-EAVLSLDVWSSGD 378 (775)
T ss_pred --------Eehhhc-CCchhheeeeecCCccceEEEEeCC--CceEEE--ecCCCc-eE-EEeCch-hheeeeeecccCc
Confidence 122222 343332 3578888999998885 456666 777765 34 444332 4454555433366
Q ss_pred EEEEEecCCeeEEEEEeCCCCce----eeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 363 MIVSYLSDVKYVLQIRDLKNGSL----LHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 363 l~~~~~~~g~~~l~~~d~~~g~~----~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
++++...|..-.||++ +++.. +.....+..++..+..+..+..++++.++.. ++-.+++.
T Consensus 379 llat~sKD~svilWr~--~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~---tlK~W~l~ 442 (775)
T KOG0319|consen 379 LLATGSKDKSVILWRL--NNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDC---TLKLWDLP 442 (775)
T ss_pred EEEEecCCceEEEEEe--cCCcchhhhhhhhcccccccceeeecccCccEEEEecCCc---eEEEecCC
Confidence 8888888865555555 32322 1122223456666677766777777666543 45555544
No 332
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=96.93 E-value=0.031 Score=58.62 Aligned_cols=143 Identities=14% Similarity=0.122 Sum_probs=86.0
Q ss_pred eEEECCCCcEEEEEEeccC---Cc---eEEEEEEECCCCce-ec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 136 KVSVSEDAKYLAYALSYSG---SD---WATIKLMRIEDQIV-EA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G---~e---~~~i~v~dl~~g~~-~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
.+.|-+.|++|++.+.+.- .. ..+||++++..... +. +..+. +..++|.|++++|+.++..
T Consensus 227 qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~p--Vhdf~W~p~S~~F~vi~g~--------- 295 (561)
T COG5354 227 QLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDP--VHDFTWEPLSSRFAVISGY--------- 295 (561)
T ss_pred EEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceecccccc--ceeeeecccCCceeEEecc---------
Confidence 3569999999999876432 11 14899999874332 11 22222 4889999999999998632
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
.+..+-.+++.+. +++-.+.... ..+.|||.++||++..-+.. ...+-++|..+.-
T Consensus 296 --------~pa~~s~~~lr~N-----l~~~~Pe~~r--NT~~fsp~~r~il~agF~nl--~gni~i~~~~~rf------- 351 (561)
T COG5354 296 --------MPASVSVFDLRGN-----LRFYFPEQKR--NTIFFSPHERYILFAGFDNL--QGNIEIFDPAGRF------- 351 (561)
T ss_pred --------cccceeecccccc-----eEEecCCccc--ccccccCcccEEEEecCCcc--ccceEEeccCCce-------
Confidence 2334555555432 3443433221 24668999999999765544 3345556665520
Q ss_pred ccCCCCCcEEeeecccceEEEEEecCCeEEEE
Q 004766 288 KRDGLLPFVKLIDGFDAQYEVIANDDTVFTFL 319 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~ 319 (732)
. ...-+.+....++-|+|||+.++.-
T Consensus 352 -----~-~~~~~~~~n~s~~~wspd~qF~~~~ 377 (561)
T COG5354 352 -----K-VAGAFNGLNTSYCDWSPDGQFYDTD 377 (561)
T ss_pred -----E-EEEEeecCCceEeeccCCceEEEec
Confidence 0 1112234445666799998755543
No 333
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=96.92 E-value=0.19 Score=50.74 Aligned_cols=199 Identities=15% Similarity=0.160 Sum_probs=105.3
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+..++|.+ ..++|.+-. .+ -.|+++|-....+.... ....+...++|-|-+..-+.+....
T Consensus 99 ~dlr~~aWhq--H~~~fava~--nd-dvVriy~ksst~pt~Lks~sQrnvtclawRPlsaselavgCr~----------- 162 (445)
T KOG2139|consen 99 IDLRGVAWHQ--HIIAFAVAT--ND-DVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLSASELAVGCRA----------- 162 (445)
T ss_pred cceeeEeech--hhhhhhhhc--cC-cEEEEeccCCCCCceecchhhcceeEEEeccCCcceeeeeecc-----------
Confidence 3467888988 456666532 22 47888887664322111 1111347899999875433332211
Q ss_pred cccCCcccEEEEEECCC----------CCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCC
Q 004766 211 ETDSNLYHEFYYHFLGT----------KQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALP 280 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt----------~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~ 280 (732)
-|..|.... .......|+..+.+ ..+.++.|.+||..++-.+- + .+.+.++|.+++.
T Consensus 163 --------gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~-g---sssi~iWdpdtg~ 229 (445)
T KOG2139|consen 163 --------GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASF-G---SSSIMIWDPDTGQ 229 (445)
T ss_pred --------eeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeeccc-C---cceEEEEcCCCCC
Confidence 011111110 01112234555443 45678999999998865443 2 3557888888753
Q ss_pred CCcccccccCCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEE-eCCCCCCceEeccCCCCCceeEEEEe
Q 004766 281 EGLEGFKKRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRV-DLKEPNDWFEVIPEAERDVLESATAV 358 (732)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~-d~~~~~~~~~l~~~~~~~~l~~~~~~ 358 (732)
..|++. .+... ....|||||+.|+..+-+ + .++|+.. ..-+.+.|. .. . ..++...|+
T Consensus 230 -----------~~pL~~--~glgg~slLkwSPdgd~lfaAt~d-a-vfrlw~e~q~wt~erw~--lg-s--grvqtacWs 289 (445)
T KOG2139|consen 230 -----------KIPLIP--KGLGGFSLLKWSPDGDVLFAATCD-A-VFRLWQENQSWTKERWI--LG-S--GRVQTACWS 289 (445)
T ss_pred -----------cccccc--cCCCceeeEEEcCCCCEEEEeccc-c-eeeeehhcccceeccee--cc-C--Cceeeeeec
Confidence 222221 12222 234699999987755443 2 4566632 222222121 11 1 267888898
Q ss_pred cC-CEEEEEEecCCeeEEEEEeCC
Q 004766 359 NL-NQMIVSYLSDVKYVLQIRDLK 381 (732)
Q Consensus 359 ~~-~~l~~~~~~~g~~~l~~~d~~ 381 (732)
+. ..|+++.. +.+.||.....
T Consensus 290 pcGsfLLf~~s--gsp~lysl~f~ 311 (445)
T KOG2139|consen 290 PCGSFLLFACS--GSPRLYSLTFD 311 (445)
T ss_pred CCCCEEEEEEc--CCceEEEEeec
Confidence 85 45555554 34677776653
No 334
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=96.91 E-value=0.036 Score=54.62 Aligned_cols=161 Identities=14% Similarity=0.107 Sum_probs=87.7
Q ss_pred eEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCC
Q 004766 244 YIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKD 323 (732)
Q Consensus 244 ~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~ 323 (732)
-+..++||.|||+|+-.+.++. |.++++.+-... +.+.++.-+.-.......|+||-+.+++...++
T Consensus 88 ~vt~~~FsSdGK~lat~~~Dr~-----Ir~w~~~DF~~~--------eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g 154 (420)
T KOG2096|consen 88 EVTDVAFSSDGKKLATISGDRS-----IRLWDVRDFENK--------EHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRG 154 (420)
T ss_pred ceeeeEEcCCCceeEEEeCCce-----EEEEecchhhhh--------hhhHhhccccCCCceEEEECCCcceEEEEEccC
Confidence 4568999999999988775443 666676653211 122222212111122235889888887766543
Q ss_pred CCCceEEEEeCCC-CC-C-----ceEe-ccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccce
Q 004766 324 APKYKIIRVDLKE-PN-D-----WFEV-IPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGS 395 (732)
Q Consensus 324 ~~~~~l~~~d~~~-~~-~-----~~~l-~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~ 395 (732)
....+|.++-.+ +. . |-.+ ++......+.++.+.++..++.+...+ ..|.+|++. |+.+..|......
T Consensus 155 -~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~d--t~i~lw~lk-Gq~L~~idtnq~~ 230 (420)
T KOG2096|consen 155 -NKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLD--TKICLWDLK-GQLLQSIDTNQSS 230 (420)
T ss_pred -CEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCC--CcEEEEecC-Cceeeeecccccc
Confidence 233344333221 11 1 1101 111112334556666645566666666 589999998 9887777654333
Q ss_pred eeEeecccCCcEEEEEEecCCCCceEEE
Q 004766 396 VNAISARREDSVVFISFTSFLIPGIVYQ 423 (732)
Q Consensus 396 v~~~~~s~d~~~l~~~~ss~~~p~~~y~ 423 (732)
......||+|.- +..+.|+---.+|.
T Consensus 231 n~~aavSP~GRF--ia~~gFTpDVkVwE 256 (420)
T KOG2096|consen 231 NYDAAVSPDGRF--IAVSGFTPDVKVWE 256 (420)
T ss_pred ccceeeCCCCcE--EEEecCCCCceEEE
Confidence 334567899973 34456654334443
No 335
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=96.89 E-value=0.015 Score=57.75 Aligned_cols=152 Identities=16% Similarity=0.069 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC------CCeeeEEEEcCCcccccccccCCCCCccccccC
Q 004766 542 FDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR------PDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFG 615 (732)
Q Consensus 542 ~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g 615 (732)
..-+..++.+|.++--+ +++-++||||||+....++..+ |.+=+.+.+..||-....... .....-...-|
T Consensus 86 a~wl~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~-~~~~~~~~~~g 162 (255)
T PF06028_consen 86 AKWLKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMND-DQNQNDLNKNG 162 (255)
T ss_dssp HHHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC--TTTT-CSTT-
T ss_pred HHHHHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccc-cchhhhhcccC
Confidence 34566788888877333 5999999999999999888864 444555566666655433221 10000012224
Q ss_pred CC-CCHHHHHHHHhc-CcccCCCCCCCCCCCCCCCCCeEEEEeeC------CCCCCCchHHHHHHHHHHHhhcCCCCCCC
Q 004766 616 CS-EEEEEFYWLIKY-SPLHNVRRPWEQNPDKPFQYPSTLLLTAD------HDDRVVPLHSLKLLATMQYVLCTSLENSP 687 (732)
Q Consensus 616 ~p-~~~~~~~~~~~~-sp~~~~~~~~~~~~~~~~~~~p~Li~~g~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 687 (732)
| ...+.++.|.+. . .+.. ....+|-+.|. .|.+||...++.+..-++..
T Consensus 163 -p~~~~~~y~~l~~~~~--~~~p-----------~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~--------- 219 (255)
T PF06028_consen 163 -PKSMTPMYQDLLKNRR--KNFP-----------KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNR--------- 219 (255)
T ss_dssp -BSS--HHHHHHHHTHG--GGST-----------TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTT---------
T ss_pred -CcccCHHHHHHHHHHH--hhCC-----------CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcc---------
Confidence 4 223445555443 2 2222 24579999998 89999988887776666643
Q ss_pred CCCCEEEEEeCC--CCCCCCCchHHHHHHHHHHHHHHH
Q 004766 688 QTNPIIGRIERK--AGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 688 ~~~~~~~~~~~~--~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
.+...-.+++| +.|...... .+....+..||.
T Consensus 220 -~~~Y~e~~v~G~~a~HS~LheN---~~V~~~I~~FLw 253 (255)
T PF06028_consen 220 -AKSYQEKTVTGKDAQHSQLHEN---PQVDKLIIQFLW 253 (255)
T ss_dssp -SSEEEEEEEESGGGSCCGGGCC---HHHHHHHHHHHC
T ss_pred -cCceEEEEEECCCCccccCCCC---HHHHHHHHHHhc
Confidence 44555555554 578654332 244456677763
No 336
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=96.88 E-value=0.0063 Score=61.54 Aligned_cols=111 Identities=13% Similarity=0.050 Sum_probs=73.5
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHh---cCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHH----HHHHH
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRH---LGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISA----SEYLI 553 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~---~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~----~~~l~ 553 (732)
.++++++-|-||.. .|-..++..|.+ ..+.|++....|....... .......+..+++|.++- ++.++
T Consensus 2 ~~li~~IPGNPGlv---~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~--~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV---EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSN--SKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCCChH---HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccc--ccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 47899999998863 454445444442 4899999999887543332 000123445566666654 33333
Q ss_pred HcCCCCCCcEEEEecChhHHHHHHHHhhCC---CeeeEEEEcCCcc
Q 004766 554 SAGYTQSRKLCIEGGSNGGLLVGACINQRP---DLFGCALAHVGVM 596 (732)
Q Consensus 554 ~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~p~~ 596 (732)
....-...++.++|||.|+++++.++.+.+ ..+..++.-.|.+
T Consensus 77 ~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 77 PQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 322114568999999999999999999998 5677777777754
No 337
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=96.87 E-value=0.044 Score=57.14 Aligned_cols=116 Identities=14% Similarity=0.151 Sum_probs=85.0
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec--ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA--DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~--~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
.++.-+.+||.-+.++-+.+..| .+.+||+.+..+.- .....+.-.+++|||-...|+.+
T Consensus 165 qsvRll~ys~skr~lL~~asd~G----~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vs-------------- 226 (673)
T KOG4378|consen 165 QSVRLLRYSPSKRFLLSIASDKG----AVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVS-------------- 226 (673)
T ss_pred CeEEEeecccccceeeEeeccCC----eEEEEeccCCCcccchhhhccCCcCcceecCCccceEEE--------------
Confidence 45667889999999988875554 78899997765432 11111222689999988777665
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCC
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
.+...+|+.++.++....+.++|+.|- ..++|+++|.+|+...+ ..+|+.+|+...
T Consensus 227 ----VG~Dkki~~yD~~s~~s~~~l~y~~Pl-----stvaf~~~G~~L~aG~s-----~G~~i~YD~R~~ 282 (673)
T KOG4378|consen 227 ----VGYDKKINIYDIRSQASTDRLTYSHPL-----STVAFSECGTYLCAGNS-----KGELIAYDMRST 282 (673)
T ss_pred ----ecccceEEEeecccccccceeeecCCc-----ceeeecCCceEEEeecC-----CceEEEEecccC
Confidence 356778999999988877888886543 47899999999987654 356999998874
No 338
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.86 E-value=0.0052 Score=62.98 Aligned_cols=93 Identities=25% Similarity=0.272 Sum_probs=67.7
Q ss_pred HHHHHhcCcEEEEEcccCCCC---CchhHHhcccc---cCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHH
Q 004766 504 TILMRHLGAVFCIANIRGGGE---YGEEWHKGGAL---AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGA 577 (732)
Q Consensus 504 ~~~l~~~G~~v~~~~~rG~g~---~g~~~~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 577 (732)
..+..+.+-.++.+..|=-|+ ||.+-+..... ..-+..+.|+...+.+|+..--.....|.++|+|+||+|+++
T Consensus 104 ~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAW 183 (492)
T KOG2183|consen 104 WDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAW 183 (492)
T ss_pred HhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHH
Confidence 344556888999999995444 45542222211 223456899999999998875556678999999999999999
Q ss_pred HHhhCCCeeeEEE-EcCCcc
Q 004766 578 CINQRPDLFGCAL-AHVGVM 596 (732)
Q Consensus 578 ~~~~~p~~f~a~v-~~~p~~ 596 (732)
.=..||.+..+++ +.+|++
T Consensus 184 fRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 184 FRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred HHhcChhhhhhhhhccCceE
Confidence 9999999876664 556655
No 339
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=96.82 E-value=0.13 Score=56.37 Aligned_cols=239 Identities=15% Similarity=0.125 Sum_probs=130.5
Q ss_pred EECCCCcEEEEEEeccCCceEEEEEEECCCCce--ecccccceeeeeE-EEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 138 SVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV--EADALSWFKFSSI-AWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 138 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~--~~~~~~~~~~~~~-~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
-+-|+-++||.+.+ + ..++++++.|-.. ++-..+- .-++ +|+ +|..|+-.+
T Consensus 331 ~lG~e~~~laVATN---s--~~lr~y~~~~~~c~ii~GH~e~--vlSL~~~~-~g~llat~s------------------ 384 (775)
T KOG0319|consen 331 FLGPEESHLAVATN---S--PELRLYTLPTSYCQIIPGHTEA--VLSLDVWS-SGDLLATGS------------------ 384 (775)
T ss_pred ecCCccceEEEEeC---C--CceEEEecCCCceEEEeCchhh--eeeeeecc-cCcEEEEec------------------
Confidence 37888899998853 2 3678888877552 2222111 2334 466 564444443
Q ss_pred CcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCC
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLP 294 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 294 (732)
....+.+|++..+...-.++-....+..-+..++.+.-|...+.+.+... .-++|-++-+. ++. .
T Consensus 385 -KD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~--tlK~W~l~~s~-~~~-----------~ 449 (775)
T KOG0319|consen 385 -KDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDC--TLKLWDLPKSK-ETA-----------F 449 (775)
T ss_pred -CCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCc--eEEEecCCCcc-ccc-----------c
Confidence 33356666664443332233222222333446677777777766665443 44555444311 111 0
Q ss_pred cEEee-----ecccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEE
Q 004766 295 FVKLI-----DGFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSY 367 (732)
Q Consensus 295 ~~~l~-----~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~ 367 (732)
...++ .-.+.++ ..++|+. .|+.....+ ...+|+.++ ...-.-+|-.|. .-+-.+.+++.++++.+.
T Consensus 450 ~~~~~~~~t~~aHdKdIN~Vaia~nd-kLiAT~SqD-ktaKiW~le--~~~l~~vLsGH~--RGvw~V~Fs~~dq~laT~ 523 (775)
T KOG0319|consen 450 PIVLTCRYTERAHDKDINCVAIAPND-KLIATGSQD-KTAKIWDLE--QLRLLGVLSGHT--RGVWCVSFSKNDQLLATC 523 (775)
T ss_pred cceehhhHHHHhhcccccceEecCCC-ceEEecccc-cceeeeccc--CceEEEEeeCCc--cceEEEEeccccceeEec
Confidence 11111 0112222 2467754 444333333 245676665 333234455554 557788888878899888
Q ss_pred ecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 368 LSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 368 ~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+.| ..|.+|.+++...++++..+...|-..++-.++..+. +..+ -+.+-.++..++
T Consensus 524 SgD--~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qli-S~~a---dGliKlWnikt~ 579 (775)
T KOG0319|consen 524 SGD--KTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLI-SAGA---DGLIKLWNIKTN 579 (775)
T ss_pred cCC--ceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEE-eccC---CCcEEEEeccch
Confidence 877 5788888888888788876666665566655666543 3322 345566666555
No 340
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=96.82 E-value=0.16 Score=54.98 Aligned_cols=282 Identities=13% Similarity=0.110 Sum_probs=141.0
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee---c--cccc--ceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE---A--DALS--WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~---~--~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
..+.++.+.+.+|+ +|.+ ..|++|++..-.-. + ..++ ......++-.-+|+.|+-++.+
T Consensus 29 ~Lq~da~~~ryLfT---gGRD-g~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsD---------- 94 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFT---GGRD-GIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSD---------- 94 (735)
T ss_pred hccccCCCCceEEe---cCCC-ceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCC----------
Confidence 44566666665565 3443 68999987532211 1 1111 0001334444457777666533
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
..|.+|+...+..- +.-....+..|+-.++.-.....++.+. +- ..+|+++|+.+++..+. .
T Consensus 95 ---------tTVK~W~~~~~~~~--c~stir~H~DYVkcla~~ak~~~lvaSg--GL--D~~IflWDin~~~~~l~---~ 156 (735)
T KOG0308|consen 95 ---------TTVKVWNAHKDNTF--CMSTIRTHKDYVKCLAYIAKNNELVASG--GL--DRKIFLWDINTGTATLV---A 156 (735)
T ss_pred ---------ceEEEeecccCcch--hHhhhhcccchheeeeecccCceeEEec--CC--CccEEEEEccCcchhhh---h
Confidence 35777776544311 1111122334554455522233333222 22 45699999987642110 0
Q ss_pred cCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 289 RDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 289 ~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
.....+...+..+.......+.-+..-..|++. +....|..+|..+.+....|..|. ..+..+.+.+|+.-+++..
T Consensus 157 s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsG--gtek~lr~wDprt~~kimkLrGHT--dNVr~ll~~dDGt~~ls~s 232 (735)
T KOG0308|consen 157 SFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSG--GTEKDLRLWDPRTCKKIMKLRGHT--DNVRVLLVNDDGTRLLSAS 232 (735)
T ss_pred hccccccccCCCCCccceeeeecCCcceEEEec--CcccceEEeccccccceeeeeccc--cceEEEEEcCCCCeEeecC
Confidence 000111112221211122222222222233332 334568888988877667777776 5677788887777777877
Q ss_pred cCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEeecCCCCCCCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDRSE 448 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~~~~~~~~ 448 (732)
.|| .|.+||+.-.+.+..+..+...|..+..+++-..+|.. ..-.-+|+-|+.+.. ..+++..+.-|-.. -.
T Consensus 233 SDg--tIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG----~rd~~i~~Tdl~n~~-~~tlick~daPv~~-l~ 304 (735)
T KOG0308|consen 233 SDG--TIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSG----GRDGNIYRTDLRNPA-KSTLICKEDAPVLK-LH 304 (735)
T ss_pred CCc--eEEeeeccccceeeeEEeccCceEEEeeCCCcceEEec----CCCCcEEecccCCch-hheEeecCCCchhh-hh
Confidence 774 78999994222333444454446566666665555422 234568888888742 35555554433111 01
Q ss_pred c--eEEEEEEEccCC
Q 004766 449 F--HVHQVFVPSKDG 461 (732)
Q Consensus 449 ~--~~~~~~~~s~dG 461 (732)
+ ..+.+|+.+.|+
T Consensus 305 ~~~~~~~~WvtTtds 319 (735)
T KOG0308|consen 305 LHEHDNSVWVTTTDS 319 (735)
T ss_pred hccccCCceeeeccc
Confidence 1 124457777776
No 341
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.76 E-value=0.0098 Score=65.10 Aligned_cols=131 Identities=15% Similarity=0.096 Sum_probs=79.1
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcC----------------hhHHHHHHhcCcEEEEEcc-cCCCCC
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFS----------------VSRTILMRHLGAVFCIANI-RGGGEY 525 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~----------------~~~~~~l~~~G~~v~~~~~-rG~g~~ 525 (732)
..+..|++..+.. ....|+||+++||||.+....+. ..-..|.. . ..++.+|. +|.| +
T Consensus 61 ~~lFyw~~~s~~~--~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~-~~~l~iDqP~G~G-~ 135 (462)
T PTZ00472 61 KHYFYWAFGPRNG--NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-E-AYVIYVDQPAGVG-F 135 (462)
T ss_pred ceEEEEEEEcCCC--CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-c-cCeEEEeCCCCcC-c
Confidence 6788888876542 45789999999999986433110 01113333 3 45556665 5654 3
Q ss_pred chhHHhcccccCCccHHHHHHHHHHHHHHc-CCCCCCcEEEEecChhHHHHHHHHhh----C------CCeeeEEEEcCC
Q 004766 526 GEEWHKGGALAKKQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACINQ----R------PDLFGCALAHVG 594 (732)
Q Consensus 526 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~----~------p~~f~a~v~~~p 594 (732)
+..-. ...........+|+..+++.+.++ ......++.|.|+||||..+..++.+ . .=-+++++++.|
T Consensus 136 S~~~~-~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg 214 (462)
T PTZ00472 136 SYADK-ADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNG 214 (462)
T ss_pred ccCCC-CCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecc
Confidence 32100 001111233567777777755543 33345789999999999988766653 1 114789999999
Q ss_pred ccccc
Q 004766 595 VMDML 599 (732)
Q Consensus 595 ~~d~~ 599 (732)
++|..
T Consensus 215 ~~dp~ 219 (462)
T PTZ00472 215 LTDPY 219 (462)
T ss_pred ccChh
Confidence 88764
No 342
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=96.74 E-value=0.053 Score=54.65 Aligned_cols=117 Identities=16% Similarity=0.094 Sum_probs=74.8
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+..+++++.+.+|||=.+.. ..+|+|+|+.+-+.... ..+......++|++||..|+-.+.
T Consensus 130 ~gl~AlS~n~~n~ylAyp~s~t---~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASe------------- 193 (391)
T KOG2110|consen 130 KGLCALSPNNANCYLAYPGSTT---SGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASE------------- 193 (391)
T ss_pred cceEeeccCCCCceEEecCCCC---CceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEecc-------------
Confidence 3456777888888999986654 35899999887654321 112223478999999999887653
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCC--CCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPE--HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~--~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
.+.-|+++.+.+++ .+++... .+..+++++||||+++|..+++..+ |++..++.
T Consensus 194 -----KGTVIRVf~v~~G~----kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeT-----VHiFKL~~ 249 (391)
T KOG2110|consen 194 -----KGTVIRVFSVPEGQ----KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTET-----VHIFKLEK 249 (391)
T ss_pred -----CceEEEEEEcCCcc----EeeeeeCCceeeEEEEEEECCCCCeEEEecCCCe-----EEEEEecc
Confidence 33345566654432 3443322 2334679999999999987765332 55555544
No 343
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=96.72 E-value=0.08 Score=53.50 Aligned_cols=157 Identities=12% Similarity=0.016 Sum_probs=89.8
Q ss_pred eEEECC--CCcEEEEEEeccCCceEEEEEEECCCCcee----cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 136 KVSVSE--DAKYLAYALSYSGSDWATIKLMRIEDQIVE----ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 136 ~~~~SP--DG~~la~~~~~~G~e~~~i~v~dl~~g~~~----~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
++.||| .|+.+ .|+-...|++|...+|.-. +.+.....+-.+.|||..+.++++..
T Consensus 216 ~LdWSp~~~g~Ll------sGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS------------ 277 (440)
T KOG0302|consen 216 GLDWSPIKTGRLL------SGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCS------------ 277 (440)
T ss_pred eeecccccccccc------cCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeee------------
Confidence 678999 34322 4555678999998888732 22222223467999999999988753
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
-...|..|++..++....+.... +..-+.-++|+.+-..|+.... ...+-++|+..-.
T Consensus 278 ------~DgsIrIWDiRs~~~~~~~~~kA--h~sDVNVISWnr~~~lLasG~D-----dGt~~iwDLR~~~--------- 335 (440)
T KOG0302|consen 278 ------CDGSIRIWDIRSGPKKAAVSTKA--HNSDVNVISWNRREPLLASGGD-----DGTLSIWDLRQFK--------- 335 (440)
T ss_pred ------cCceEEEEEecCCCccceeEeec--cCCceeeEEccCCcceeeecCC-----CceEEEEEhhhcc---------
Confidence 22357788887765443333322 2223345788777664443322 2346777877632
Q ss_pred CCCCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCC
Q 004766 290 DGLLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKE 336 (732)
Q Consensus 290 ~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 336 (732)
...|+..........+. -|+|.....+..+.. ..+|..+|++-
T Consensus 336 -~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~---D~QitiWDlsv 379 (440)
T KOG0302|consen 336 -SGQPVATFKYHKAPITSIEWHPHEDSVIAASGE---DNQITIWDLSV 379 (440)
T ss_pred -CCCcceeEEeccCCeeEEEeccccCceEEeccC---CCcEEEEEeec
Confidence 12333333333333333 388866665555443 34688888754
No 344
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=96.71 E-value=0.1 Score=52.65 Aligned_cols=147 Identities=10% Similarity=0.135 Sum_probs=91.4
Q ss_pred CCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee--cccceEEEEEecCC--eEEEEeCCCCCCce
Q 004766 253 DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID--GFDAQYEVIANDDT--VFTFLTNKDAPKYK 328 (732)
Q Consensus 253 Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~s~dg~--~l~~~s~~~~~~~~ 328 (732)
+.++|++... ..||++|+.+-. .+..+.. ........+|++.. ++++=. ....+.
T Consensus 96 Nr~RLvV~Le------e~IyIydI~~Mk-------------lLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~--s~t~Gd 154 (391)
T KOG2110|consen 96 NRKRLVVCLE------ESIYIYDIKDMK-------------LLHTIETTPPNPKGLCALSPNNANCYLAYPG--STTSGD 154 (391)
T ss_pred ccceEEEEEc------ccEEEEecccce-------------eehhhhccCCCccceEeeccCCCCceEEecC--CCCCce
Confidence 5566666552 349999987621 0111111 11122345666544 555433 334678
Q ss_pred EEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc--cceeeEeecccCCc
Q 004766 329 IIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDS 406 (732)
Q Consensus 329 l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~ 406 (732)
|+++|+.+-.....+-.|. ..+..+.++.++.++++.++.| .-|+++...+|+.+.++-.. ...+.++++++|+.
T Consensus 155 V~l~d~~nl~~v~~I~aH~--~~lAalafs~~G~llATASeKG-TVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~ 231 (391)
T KOG2110|consen 155 VVLFDTINLQPVNTINAHK--GPLAALAFSPDGTLLATASEKG-TVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQ 231 (391)
T ss_pred EEEEEcccceeeeEEEecC--CceeEEEECCCCCEEEEeccCc-eEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCC
Confidence 9999987765334444454 6788899988888999998887 57889998888876666543 34567888999988
Q ss_pred EEEEEEecCCCCceEEEEE
Q 004766 407 VVFISFTSFLIPGIVYQCN 425 (732)
Q Consensus 407 ~l~~~~ss~~~p~~~y~~d 425 (732)
.| ..+|-+.--.++.++
T Consensus 232 ~L--~~sS~TeTVHiFKL~ 248 (391)
T KOG2110|consen 232 FL--AASSNTETVHIFKLE 248 (391)
T ss_pred eE--EEecCCCeEEEEEec
Confidence 44 444545444555554
No 345
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=96.67 E-value=0.0035 Score=42.33 Aligned_cols=29 Identities=17% Similarity=0.100 Sum_probs=21.1
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEE
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKL 162 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v 162 (732)
...+.|||||++|+|++...+....+||+
T Consensus 11 ~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 11 DGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp EEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred ccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 35899999999999999988222367775
No 346
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=96.66 E-value=0.079 Score=54.08 Aligned_cols=114 Identities=15% Similarity=0.114 Sum_probs=66.3
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccce-eeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWF-KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
+....||||+..+.+.+ + ...+++||+..|..+....+.. -..+++|.|-++.|+-.+.+..... +
T Consensus 126 iydL~Ws~d~~~l~s~s---~--dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~--~------ 192 (434)
T KOG1009|consen 126 IYDLAWSPDSNFLVSGS---V--DNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEG--F------ 192 (434)
T ss_pred hhhhhccCCCceeeeee---c--cceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccce--e------
Confidence 45688999999988764 2 2578999999998665332222 2378999999998887665441100 0
Q ss_pred cCCcccEEEEEE-----CCCC---CCCCeEEEecCCCCeeEEEeEEecCCcEEEEE
Q 004766 213 DSNLYHEFYYHF-----LGTK---QSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 260 (732)
Q Consensus 213 ~~~~~~~v~~~~-----lgt~---~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~ 260 (732)
.......++++. .+.. ...-.-+|....-..|+..++|||||..++.-
T Consensus 193 ~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtP 248 (434)
T KOG1009|consen 193 SAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTP 248 (434)
T ss_pred eeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcc
Confidence 001111222222 1111 11112244433334566788999999998764
No 347
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=96.66 E-value=0.0026 Score=66.43 Aligned_cols=112 Identities=21% Similarity=0.209 Sum_probs=74.7
Q ss_pred EEEEEcCCC---CccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHc---C
Q 004766 483 CLLYGYGGF---NISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA---G 556 (732)
Q Consensus 483 ~vv~~hG~~---~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~ 556 (732)
++|++|||. |++...-|+..+ +.+....+|+.+|||-|. ||--+.-......+--.+-|..-|+.|+.++ -
T Consensus 137 VlVWiyGGGF~sGt~SLdvYdGk~--la~~envIvVs~NYRvG~-FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aF 213 (601)
T KOG4389|consen 137 VLVWIYGGGFYSGTPSLDVYDGKF--LAAVENVIVVSMNYRVGA-FGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAF 213 (601)
T ss_pred EEEEEEcCccccCCcceeeeccce--eeeeccEEEEEeeeeecc-ceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHh
Confidence 999999983 333334455543 234357899999999642 3332221111122223478999999999887 2
Q ss_pred CCCCCcEEEEecChhHHHHHHHHhhCCC---eeeEEEEcCCcccc
Q 004766 557 YTQSRKLCIEGGSNGGLLVGACINQRPD---LFGCALAHVGVMDM 598 (732)
Q Consensus 557 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~p~~d~ 598 (732)
--||+||.++|.|+|..-+.+-+.- |. +|+-+|+++|-++-
T Consensus 214 GGnp~~vTLFGESAGaASv~aHLls-P~S~glF~raIlQSGS~~~ 257 (601)
T KOG4389|consen 214 GGNPSRVTLFGESAGAASVVAHLLS-PGSRGLFHRAILQSGSLNN 257 (601)
T ss_pred CCCcceEEEeccccchhhhhheecC-CCchhhHHHHHhhcCCCCC
Confidence 3589999999999998866655443 43 79999999986653
No 348
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.65 E-value=0.24 Score=49.14 Aligned_cols=201 Identities=13% Similarity=0.120 Sum_probs=97.3
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
.++++|.||+++|+.+.+ .+..|+..++.+.. -...-+.+ ..-..++++.-+|++++
T Consensus 24 ~SGLTy~pd~~tLfaV~d------------------~~~~i~els~~G~v-lr~i~l~g---~~D~EgI~y~g~~~~vl- 80 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAVQD------------------EPGEIYELSLDGKV-LRRIPLDG---FGDYEGITYLGNGRYVL- 80 (248)
T ss_dssp EEEEEEETTTTEEEEEET------------------TTTEEEEEETT--E-EEEEE-SS----SSEEEEEE-STTEEEE-
T ss_pred ccccEEcCCCCeEEEEEC------------------CCCEEEEEcCCCCE-EEEEeCCC---CCCceeEEEECCCEEEE-
Confidence 499999999999888853 33467777764221 11111211 11234778887887654
Q ss_pred EEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc----cc--eEEEEEecCCeEEEEeCCCCCCceEEEEe
Q 004766 260 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF----DA--QYEVIANDDTVFTFLTNKDAPKYKIIRVD 333 (732)
Q Consensus 260 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~--~~~~~s~dg~~l~~~s~~~~~~~~l~~~d 333 (732)
... . ...++++++......+. ....+.+.-+. .. +-.+|.+.+++|++...+ .+ ..|+.++
T Consensus 81 ~~E-r---~~~L~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~-~P-~~l~~~~ 147 (248)
T PF06977_consen 81 SEE-R---DQRLYIFTIDDDTTSLD-------RADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKER-KP-KRLYEVN 147 (248)
T ss_dssp EET-T---TTEEEEEEE----TT---------EEEEEEEE---S---SS--EEEEEETTTTEEEEEEES-SS-EEEEEEE
T ss_pred EEc-C---CCcEEEEEEeccccccc-------hhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCC-CC-hhhEEEc
Confidence 322 2 24577776633111000 00011121111 11 223588888999987554 33 4688887
Q ss_pred C--CCCC-CceEec--c--CCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCCCCceeeeccccc---------cee
Q 004766 334 L--KEPN-DWFEVI--P--EAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEI---------GSV 396 (732)
Q Consensus 334 ~--~~~~-~~~~l~--~--~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~---------g~v 396 (732)
. .... ...... . ...-..++++.+.+. +++++.+.+. ..|..+|.+ |+.+..+.+.. -..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es--~~l~~~d~~-G~~~~~~~L~~g~~gl~~~~~Qp 224 (248)
T PF06977_consen 148 GFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDES--RLLLELDRQ-GRVVSSLSLDRGFHGLSKDIPQP 224 (248)
T ss_dssp STT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTT--TEEEEE-TT---EEEEEE-STTGGG-SS---SE
T ss_pred cccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCC--CeEEEECCC-CCEEEEEEeCCcccCcccccCCc
Confidence 6 2211 001110 0 011134677777763 6888887665 578888865 87655555432 134
Q ss_pred eEeecccCCcEEEEEEecCCCCceEEEE
Q 004766 397 NAISARREDSVVFISFTSFLIPGIVYQC 424 (732)
Q Consensus 397 ~~~~~s~d~~~l~~~~ss~~~p~~~y~~ 424 (732)
.+++++++|+ ||++. .|...|++
T Consensus 225 EGIa~d~~G~-LYIvs----EpNlfy~f 247 (248)
T PF06977_consen 225 EGIAFDPDGN-LYIVS----EPNLFYRF 247 (248)
T ss_dssp EEEEE-TT---EEEEE----TTTEEEEE
T ss_pred cEEEECCCCC-EEEEc----CCceEEEe
Confidence 5678888874 55542 37777765
No 349
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=96.64 E-value=0.014 Score=57.26 Aligned_cols=103 Identities=16% Similarity=0.156 Sum_probs=54.2
Q ss_pred ccEEEEEcCCCCccCCC-CcChhHH-H-HH--HhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHc
Q 004766 481 HPCLLYGYGGFNISVTP-SFSVSRT-I-LM--RHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA 555 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~-~~~~~~~-~-~l--~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 555 (732)
...|||+||..|+.... .+..... . +. ....+.++..|+..-.. .++.. .. ....+-+..+++++.+.
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s---~~~g~--~l--~~q~~~~~~~i~~i~~~ 76 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELS---AFHGR--TL--QRQAEFLAEAIKYILEL 76 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccc---ccccc--cH--HHHHHHHHHHHHHHHHh
Confidence 35789999976652211 1111110 0 00 11257788888764211 11100 00 01123344555655443
Q ss_pred ---CCCCCCcEEEEecChhHHHHHHHHhhCC---CeeeEEE
Q 004766 556 ---GYTQSRKLCIEGGSNGGLLVGACINQRP---DLFGCAL 590 (732)
Q Consensus 556 ---~~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~f~a~v 590 (732)
....+++|.++||||||+++-.++...+ +..+.+|
T Consensus 77 ~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~ii 117 (225)
T PF07819_consen 77 YKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTII 117 (225)
T ss_pred hhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEE
Confidence 2457899999999999998887776533 2455554
No 350
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=96.63 E-value=0.21 Score=52.22 Aligned_cols=117 Identities=12% Similarity=-0.032 Sum_probs=77.5
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccccccee-eeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFK-FSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~-~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...+....|+|+++.++.+. ++...+.+||+.++....+..+..+ ....+|+|-...++++
T Consensus 110 ~apv~~~~f~~~d~t~l~s~----sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvt-------------- 171 (487)
T KOG0310|consen 110 QAPVHVTKFSPQDNTMLVSG----SDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVT-------------- 171 (487)
T ss_pred cCceeEEEecccCCeEEEec----CCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEe--------------
Confidence 34567788999998877653 4446889999999885322222222 3678999988888887
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCC
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
.++...|.+|+.-+... .+.+... ..-+.++.+-|.|..|+..+ .+.+-+||+.+|
T Consensus 172 ----GsYDg~vrl~DtR~~~~---~v~elnh-g~pVe~vl~lpsgs~iasAg------Gn~vkVWDl~~G 227 (487)
T KOG0310|consen 172 ----GSYDGKVRLWDTRSLTS---RVVELNH-GCPVESVLALPSGSLIASAG------GNSVKVWDLTTG 227 (487)
T ss_pred ----cCCCceEEEEEeccCCc---eeEEecC-CCceeeEEEcCCCCEEEEcC------CCeEEEEEecCC
Confidence 35677899999866432 2333221 22345677788988886543 255788898864
No 351
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=96.62 E-value=0.16 Score=50.49 Aligned_cols=111 Identities=10% Similarity=0.055 Sum_probs=63.9
Q ss_pred EEEecCCeEEEEeCCCCCCceEEEEeCCCCC----CceEeccCC--CCCceeEEEEecC-CEEEEEEecCCeeEEEEEeC
Q 004766 308 VIANDDTVFTFLTNKDAPKYKIIRVDLKEPN----DWFEVIPEA--ERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDL 380 (732)
Q Consensus 308 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~----~~~~l~~~~--~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~ 380 (732)
.|+|||..|+. +-+..|-.+|+..+. ...++.... ....+..+++++- ...+....-...--||.+
T Consensus 165 ~Fs~DGeqlfa-----GykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~-- 237 (406)
T KOG2919|consen 165 QFSPDGEQLFA-----GYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYND-- 237 (406)
T ss_pred EecCCCCeEee-----cccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEec--
Confidence 49999999884 234457777774432 122222211 1234566677663 334443333322344444
Q ss_pred CCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 381 KNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 381 ~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+.+..+..+-...|.|..+.+-+||+.++ +....-..|..+|+..
T Consensus 238 ~~~~pl~llggh~gGvThL~~~edGn~lf---sGaRk~dkIl~WDiR~ 282 (406)
T KOG2919|consen 238 DGRRPLQLLGGHGGGVTHLQWCEDGNKLF---SGARKDDKILCWDIRY 282 (406)
T ss_pred CCCCceeeecccCCCeeeEEeccCcCeec---ccccCCCeEEEEeehh
Confidence 33455444444477888899999999764 4566677888888753
No 352
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.56 E-value=0.18 Score=51.74 Aligned_cols=62 Identities=11% Similarity=0.048 Sum_probs=35.7
Q ss_pred EEEeEEECCCCcEEEEEEec------c-CCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEE
Q 004766 133 ALIKVSVSEDAKYLAYALSY------S-GSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYS 195 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~------~-G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~ 195 (732)
......+.|||+.. |.... . ..+...||.+|..++........-....+++|||||+.+|++
T Consensus 112 r~ND~~v~pdG~~w-fgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~a 180 (307)
T COG3386 112 RPNDGVVDPDGRIW-FGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVA 180 (307)
T ss_pred CCCceeEcCCCCEE-EeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEE
Confidence 34577889999743 33322 1 122346777776444322111101123789999999988887
No 353
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.55 E-value=0.0042 Score=66.94 Aligned_cols=86 Identities=21% Similarity=0.274 Sum_probs=57.4
Q ss_pred CcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHH
Q 004766 498 SFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGA 577 (732)
Q Consensus 498 ~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 577 (732)
.|... ...|.+.||.+ ..|++| +|.+|.... .....++++.+.++.+.+.. ...++.|+||||||+++..
T Consensus 109 ~~~~l-i~~L~~~GY~~-~~dL~g---~gYDwR~~~---~~~~~~~~Lk~lIe~~~~~~--g~~kV~LVGHSMGGlva~~ 178 (440)
T PLN02733 109 YFHDM-IEQLIKWGYKE-GKTLFG---FGYDFRQSN---RLPETMDGLKKKLETVYKAS--GGKKVNIISHSMGGLLVKC 178 (440)
T ss_pred HHHHH-HHHHHHcCCcc-CCCccc---CCCCccccc---cHHHHHHHHHHHHHHHHHHc--CCCCEEEEEECHhHHHHHH
Confidence 44443 45566699877 678888 445565431 11234677777777766542 2368999999999999999
Q ss_pred HHhhCCCee----eEEEEcC
Q 004766 578 CINQRPDLF----GCALAHV 593 (732)
Q Consensus 578 ~~~~~p~~f----~a~v~~~ 593 (732)
++.++|+.+ +..|+.+
T Consensus 179 fl~~~p~~~~k~I~~~I~la 198 (440)
T PLN02733 179 FMSLHSDVFEKYVNSWIAIA 198 (440)
T ss_pred HHHHCCHhHHhHhccEEEEC
Confidence 998888753 4445443
No 354
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=96.54 E-value=0.07 Score=54.22 Aligned_cols=161 Identities=10% Similarity=0.015 Sum_probs=90.6
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee-cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE-ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~-~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...++-+.|.|--.-++++. |.+ ++|.+||+.||+.+ ... ...-..+..|+-||..|+-++.+.
T Consensus 131 ~rrVg~V~wHPtA~NVLlsa---g~D-n~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDK---------- 195 (472)
T KOG0303|consen 131 QRRVGLVQWHPTAPNVLLSA---GSD-NTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDK---------- 195 (472)
T ss_pred ceeEEEEeecccchhhHhhc---cCC-ceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccc----------
Confidence 45678888999877666653 333 68999999999944 222 222358899999999888776443
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCe-eEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPK-YIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~-~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
+|..++..++. +|.+...+.+ -...+-|-.+|+ |+-+.-... ....+-++|.....
T Consensus 196 ---------kvRv~dpr~~~----~v~e~~~heG~k~~Raifl~~g~-i~tTGfsr~-seRq~aLwdp~nl~-------- 252 (472)
T KOG0303|consen 196 ---------KVRVIDPRRGT----VVSEGVAHEGAKPARAIFLASGK-IFTTGFSRM-SERQIALWDPNNLE-------- 252 (472)
T ss_pred ---------eeEEEcCCCCc----EeeecccccCCCcceeEEeccCc-eeeeccccc-cccceeccCccccc--------
Confidence 57777765542 3443322111 112455667888 433332222 13456666655421
Q ss_pred cCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEE
Q 004766 289 RDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRV 332 (732)
Q Consensus 289 ~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~ 332 (732)
++.....|-.....-.+++.+|.+.+| +..++..+.+-|.+
T Consensus 253 --eP~~~~elDtSnGvl~PFyD~dt~ivY-l~GKGD~~IRYyEi 293 (472)
T KOG0303|consen 253 --EPIALQELDTSNGVLLPFYDPDTSIVY-LCGKGDSSIRYFEI 293 (472)
T ss_pred --CcceeEEeccCCceEEeeecCCCCEEE-EEecCCcceEEEEe
Confidence 122233443333334456777666555 44444334444444
No 355
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=96.54 E-value=0.12 Score=56.08 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=62.0
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+.++.+-|||..|.... |+ .++++|...|..+..-. .......++||.||+.++-...+.
T Consensus 14 ci~d~afkPDGsqL~lAA---g~---rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK------------ 75 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA---GS---RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADK------------ 75 (1081)
T ss_pred chheeEECCCCceEEEec---CC---EEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCce------------
Confidence 577899999999998774 33 79999999888653221 111247899999999887543221
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEE
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCI 261 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 261 (732)
-|.+|. .+-+.++-|...+ .+--..|.|-.+.|+-.+
T Consensus 76 -------~VI~W~---~klEG~LkYSH~D---~IQCMsFNP~~h~LasCs 112 (1081)
T KOG1538|consen 76 -------SVIIWT---SKLEGILKYSHND---AIQCMSFNPITHQLASCS 112 (1081)
T ss_pred -------eEEEec---ccccceeeeccCC---eeeEeecCchHHHhhhcc
Confidence 233333 2233445554433 233456778777776554
No 356
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=96.54 E-value=0.028 Score=55.85 Aligned_cols=179 Identities=12% Similarity=0.082 Sum_probs=97.7
Q ss_pred cCCceEEEEEEECCCCceeccccccee-eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCC
Q 004766 153 SGSDWATIKLMRIEDQIVEADALSWFK-FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSE 231 (732)
Q Consensus 153 ~G~e~~~i~v~dl~~g~~~~~~~~~~~-~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~ 231 (732)
.|+...+++|||+++|+++..-+..+. .-++.++ +| .++-.+ +.+.+.+|++.++...
T Consensus 252 sGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~-ng-~mvtcS-------------------kDrsiaVWdm~sps~i 310 (499)
T KOG0281|consen 252 SGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS-NG-YMVTCS-------------------KDRSIAVWDMASPTDI 310 (499)
T ss_pred ecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe-CC-EEEEec-------------------CCceeEEEeccCchHH
Confidence 355568999999999998865555442 3567887 44 333332 3345777787765321
Q ss_pred Ce-EEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEE
Q 004766 232 DI-LCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIA 310 (732)
Q Consensus 232 ~~-~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s 310 (732)
.. -|..+ +...+..+ .-|.|+|+-.+.+ ..|-+++..+.+ ..+...+....+...
T Consensus 311 t~rrVLvG--HrAaVNvV--dfd~kyIVsASgD-----RTikvW~~st~e--------------fvRtl~gHkRGIACl- 366 (499)
T KOG0281|consen 311 TLRRVLVG--HRAAVNVV--DFDDKYIVSASGD-----RTIKVWSTSTCE--------------FVRTLNGHKRGIACL- 366 (499)
T ss_pred HHHHHHhh--hhhheeee--ccccceEEEecCC-----ceEEEEecccee--------------eehhhhcccccceeh-
Confidence 00 01111 11111223 3367777655433 336677777743 122222333333322
Q ss_pred ecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCce
Q 004766 311 NDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL 385 (732)
Q Consensus 311 ~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~ 385 (732)
...++|++... ....|-.+|+..+...+.|-.++ ..+..+.+.. .-+++..-+| .|.+||+.++..
T Consensus 367 QYr~rlvVSGS---SDntIRlwdi~~G~cLRvLeGHE--eLvRciRFd~--krIVSGaYDG--kikvWdl~aald 432 (499)
T KOG0281|consen 367 QYRDRLVVSGS---SDNTIRLWDIECGACLRVLEGHE--ELVRCIRFDN--KRIVSGAYDG--KIKVWDLQAALD 432 (499)
T ss_pred hccCeEEEecC---CCceEEEEeccccHHHHHHhchH--HhhhheeecC--ceeeeccccc--eEEEEecccccC
Confidence 22445555332 23468888988887555454443 4566666543 4455665664 788999876654
No 357
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=96.49 E-value=0.01 Score=65.50 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=66.5
Q ss_pred eEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEE
Q 004766 157 WATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILC 235 (732)
Q Consensus 157 ~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v 235 (732)
...|.++|+.|.+...+.. .+.+...++||||||+|+..+.|. .|+.||+-|+.--|.+.
T Consensus 555 df~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~-------------------tIr~wDlpt~~lID~~~ 615 (910)
T KOG1539|consen 555 DFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDS-------------------TIRTWDLPTGTLIDGLL 615 (910)
T ss_pred ceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCC-------------------cEEEEeccCcceeeeEe
Confidence 4679999998877554332 233468999999999999887543 69999999887666666
Q ss_pred EecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEe
Q 004766 236 WKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCD 275 (732)
Q Consensus 236 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d 275 (732)
++.+ ..++.+||+|.+|+.+..+ .+.||++.
T Consensus 616 vd~~-----~~sls~SPngD~LAT~Hvd----~~gIylWs 646 (910)
T KOG1539|consen 616 VDSP-----CTSLSFSPNGDFLATVHVD----QNGIYLWS 646 (910)
T ss_pred cCCc-----ceeeEECCCCCEEEEEEec----CceEEEEE
Confidence 5432 2578999999999876543 34577764
No 358
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=96.47 E-value=0.086 Score=53.89 Aligned_cols=221 Identities=10% Similarity=0.004 Sum_probs=117.9
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+....+-+|++++.-..+ ...+++|++..++.+. .+....+...+-+.-+...++-.
T Consensus 221 ~it~~d~d~~~~~~iAas~-----d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsg---------------- 279 (459)
T KOG0288|consen 221 NITSIDFDSDNKHVIAASN-----DKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSG---------------- 279 (459)
T ss_pred CcceeeecCCCceEEeecC-----CCceeeeeccchhhhhhhcccccceeeehhhccccceeec----------------
Confidence 4677889999998764432 2478999998776432 22222234555565554443222
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
....++..|++.........+..... .++..+ ...++ +.+. ...|..+|..+..
T Consensus 280 ---s~DRtiK~WDl~k~~C~kt~l~~S~c-----nDI~~~---~~~~~--SgH~--DkkvRfwD~Rs~~----------- 333 (459)
T KOG0288|consen 280 ---SADRTIKLWDLQKAYCSKTVLPGSQC-----NDIVCS---ISDVI--SGHF--DKKVRFWDIRSAD----------- 333 (459)
T ss_pred ---cccchhhhhhhhhhheeccccccccc-----cceEec---ceeee--eccc--ccceEEEeccCCc-----------
Confidence 23456777887764433222222211 123333 12222 2232 3447788865521
Q ss_pred CCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCC---CCceeEEEEecCCEEEEEEe
Q 004766 292 LLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE---RDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~---~~~l~~~~~~~~~~l~~~~~ 368 (732)
+...+..+....-...+++|..+.-.+.+ ..|-.+|+.+.. +...+.... ......+.+++++..+++..
T Consensus 334 --~~~sv~~gg~vtSl~ls~~g~~lLsssRD----dtl~viDlRt~e-I~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS 406 (459)
T KOG0288|consen 334 --KTRSVPLGGRVTSLDLSMDGLELLSSSRD----DTLKVIDLRTKE-IRQTFSAEGFKCASDWTRVVFSPDGSYVAAGS 406 (459)
T ss_pred --eeeEeecCcceeeEeeccCCeEEeeecCC----Cceeeeeccccc-EEEEeeccccccccccceeEECCCCceeeecc
Confidence 11111111111112367788777654322 246677887765 232222210 12245567788777777777
Q ss_pred cCCeeEEEEEeCCCCceeeecccc--cceeeEeecccCCcEEE
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVF 409 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~~l~ 409 (732)
.+| .|++|++.+|+....+..+ +..+.++++++.|..++
T Consensus 407 ~dg--sv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Ll 447 (459)
T KOG0288|consen 407 ADG--SVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLL 447 (459)
T ss_pred CCC--cEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhh
Confidence 774 7999999988875556544 22466777777766543
No 359
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=96.45 E-value=0.63 Score=48.54 Aligned_cols=200 Identities=14% Similarity=0.074 Sum_probs=101.6
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee----cc-------------c--ccceeeeeEEEEeCCc
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE----AD-------------A--LSWFKFSSIAWTHDSK 190 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~----~~-------------~--~~~~~~~~~~WspDg~ 190 (732)
+..++-.+.+|||++++. +.+.+| +|--|++.+|... +. . ......-.++-|+||+
T Consensus 141 H~~s~~~vals~d~~~~f-sask~g----~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgk 215 (479)
T KOG0299|consen 141 HQLSVTSVALSPDDKRVF-SASKDG----TILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGK 215 (479)
T ss_pred ccCcceEEEeecccccee-ecCCCc----ceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCc
Confidence 345577889999998774 444333 6777777776522 10 0 0001124678899999
Q ss_pred EEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEE
Q 004766 191 GFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNK 270 (732)
Q Consensus 191 ~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~ 270 (732)
+|++. ++.+.|..|+..|.+. +-++.. +..-+.+++|-..-..|+..+.+. .-.
T Consensus 216 ylatg-------------------g~d~~v~Iw~~~t~eh--v~~~~g--hr~~V~~L~fr~gt~~lys~s~Dr---svk 269 (479)
T KOG0299|consen 216 YLATG-------------------GRDRHVQIWDCDTLEH--VKVFKG--HRGAVSSLAFRKGTSELYSASADR---SVK 269 (479)
T ss_pred EEEec-------------------CCCceEEEecCcccch--hhcccc--cccceeeeeeecCccceeeeecCC---ceE
Confidence 99875 3455677888777543 223322 233345666654444444333322 234
Q ss_pred EEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEe-cCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCC
Q 004766 271 VYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAER 349 (732)
Q Consensus 271 l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~ 349 (732)
+|.++--+- ...+. +....+..++. +-.+++-+..++. ..+||.+. .. -+.++-.. .
T Consensus 270 vw~~~~~s~---------------vetly-GHqd~v~~IdaL~reR~vtVGgrDr-T~rlwKi~--ee--sqlifrg~-~ 327 (479)
T KOG0299|consen 270 VWSIDQLSY---------------VETLY-GHQDGVLGIDALSRERCVTVGGRDR-TVRLWKIP--EE--SQLIFRGG-E 327 (479)
T ss_pred EEehhHhHH---------------HHHHh-CCccceeeechhcccceEEeccccc-eeEEEecc--cc--ceeeeeCC-C
Confidence 454432110 11111 11111211221 1233443333332 33455552 21 13333322 4
Q ss_pred CceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCce
Q 004766 350 DVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL 385 (732)
Q Consensus 350 ~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~ 385 (732)
..+..+++.++ .-+++...+| .|++|++...+.
T Consensus 328 ~sidcv~~In~-~HfvsGSdnG--~IaLWs~~KKkp 360 (479)
T KOG0299|consen 328 GSIDCVAFIND-EHFVSGSDNG--SIALWSLLKKKP 360 (479)
T ss_pred CCeeeEEEecc-cceeeccCCc--eEEEeeecccCc
Confidence 57888888874 4455677774 789999865443
No 360
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=96.38 E-value=0.014 Score=56.61 Aligned_cols=89 Identities=13% Similarity=0.110 Sum_probs=46.3
Q ss_pred EEEEcCCCCccCCCCcChhHHHHHHhcCcE---EEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 484 LLYGYGGFNISVTPSFSVSRTILMRHLGAV---FCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 484 vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~---v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
||++||-.+. ....|...... |.++||. +...++-.... . ....... ........+.+.++.+.+. +-.
T Consensus 4 VVlVHG~~~~-~~~~w~~~~~~-l~~~GY~~~~vya~tyg~~~~-~-~~~~~~~--~~~~~~~~l~~fI~~Vl~~--TGa 75 (219)
T PF01674_consen 4 VVLVHGTGGN-AYSNWSTLAPY-LKAAGYCDSEVYALTYGSGNG-S-PSVQNAH--MSCESAKQLRAFIDAVLAY--TGA 75 (219)
T ss_dssp EEEE--TTTT-TCGGCCHHHHH-HHHTT--CCCEEEE--S-CCH-H-THHHHHH--B-HHHHHHHHHHHHHHHHH--HT-
T ss_pred EEEECCCCcc-hhhCHHHHHHH-HHHcCCCcceeEeccCCCCCC-C-Ccccccc--cchhhHHHHHHHHHHHHHh--hCC
Confidence 7889997653 24456654444 4449999 78888843322 1 1111111 1122235555556655543 566
Q ss_pred CcEEEEecChhHHHHHHHHhh
Q 004766 561 RKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~ 581 (732)
||=|+|||+||.++-.++..
T Consensus 76 -kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 76 -KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp --EEEEEETCHHHHHHHHHHH
T ss_pred -EEEEEEcCCcCHHHHHHHHH
Confidence 99999999999988887753
No 361
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.30 E-value=0.0086 Score=65.33 Aligned_cols=141 Identities=16% Similarity=0.082 Sum_probs=81.8
Q ss_pred EEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCc---------C--------hhHHHHHHhcCcEEEE
Q 004766 454 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSF---------S--------VSRTILMRHLGAVFCI 516 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~---------~--------~~~~~~l~~~G~~v~~ 516 (732)
+.+....+ ..+..|++..++ .....|+||++.||||.+....+ . ..-..|. +-..++.
T Consensus 16 l~~~~~~~-~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~--~~an~l~ 90 (415)
T PF00450_consen 16 LPVNDNEN-AHLFYWFFESRN--DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWN--KFANLLF 90 (415)
T ss_dssp EEECTTTT-EEEEEEEEE-SS--GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GG--GTSEEEE
T ss_pred EecCCCCC-cEEEEEEEEeCC--CCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccc--cccceEE
Confidence 44444466 788888886665 34678999999999998653110 0 0012333 3477888
Q ss_pred EcccCCCCCchhHHhcccccCCccHHHHHHHHHHHH-HHcCCCCCCcEEEEecChhHHHHHHHHh----hC------CCe
Q 004766 517 ANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYL-ISAGYTQSRKLCIEGGSNGGLLVGACIN----QR------PDL 585 (732)
Q Consensus 517 ~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l-~~~~~~d~~~i~i~G~S~GG~l~~~~~~----~~------p~~ 585 (732)
+|.+-|.||...-........-....+|+..++..+ .+........+.|.|-|+||..+..++. +. +=.
T Consensus 91 iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~in 170 (415)
T PF00450_consen 91 IDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKIN 170 (415)
T ss_dssp E--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSE
T ss_pred EeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccc
Confidence 898877777554332221112233456666666543 3444445668999999999987655544 33 235
Q ss_pred eeEEEEcCCccccc
Q 004766 586 FGCALAHVGVMDML 599 (732)
Q Consensus 586 f~a~v~~~p~~d~~ 599 (732)
+++++++.|++|..
T Consensus 171 LkGi~IGng~~dp~ 184 (415)
T PF00450_consen 171 LKGIAIGNGWIDPR 184 (415)
T ss_dssp EEEEEEESE-SBHH
T ss_pred cccceecCcccccc
Confidence 89999999988763
No 362
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.29 E-value=0.9 Score=44.71 Aligned_cols=59 Identities=3% Similarity=-0.048 Sum_probs=36.9
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec--ccccce-eeeeEEEEeCCcEEEEEEe
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA--DALSWF-KFSSIAWTHDSKGFFYSRY 197 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~--~~~~~~-~~~~~~WspDg~~l~y~~~ 197 (732)
++.++|--.+-.+...+.|. ...++|..++.... ...++- -++.-.|||||+.||-+.+
T Consensus 72 gi~~~p~~~ravafARrPGt---f~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEn 133 (366)
T COG3490 72 GIAFHPALPRAVAFARRPGT---FAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATEN 133 (366)
T ss_pred CeecCCCCcceEEEEecCCc---eEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecC
Confidence 67788876664444445564 56789998877321 112221 2466789999987766543
No 363
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.29 E-value=0.14 Score=51.05 Aligned_cols=128 Identities=10% Similarity=0.023 Sum_probs=74.1
Q ss_pred EEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCc---cCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhc
Q 004766 456 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNI---SVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKG 532 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~---~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~ 532 (732)
++++-| .|.+.+.-. +++..|+||..|--.-. +....|+.+-.+.+. ..+.++=+|.+|..+-.......
T Consensus 4 v~t~~G--~v~V~v~G~----~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~ 76 (283)
T PF03096_consen 4 VETPYG--SVHVTVQGD----PKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEG 76 (283)
T ss_dssp EEETTE--EEEEEEESS------TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT
T ss_pred eccCce--EEEEEEEec----CCCCCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCccccccc
Confidence 445555 566655532 23478999999974211 123334444456677 78999999999987633332221
Q ss_pred ccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 533 GALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 533 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
..-.+++++.+.+..+.+.--+ +.+..+|--+|+++-+..+..+|++.-+.|+..|..
T Consensus 77 ----y~yPsmd~LAe~l~~Vl~~f~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~ 134 (283)
T PF03096_consen 77 ----YQYPSMDQLAEMLPEVLDHFGL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPTC 134 (283)
T ss_dssp ---------HHHHHCTHHHHHHHHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---
T ss_pred ----ccccCHHHHHHHHHHHHHhCCc--cEEEEEeeccchhhhhhccccCccceeEEEEEecCC
Confidence 1234566666555555544112 479999999999999999999999999999887754
No 364
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=96.28 E-value=0.97 Score=47.05 Aligned_cols=201 Identities=12% Similarity=0.087 Sum_probs=114.3
Q ss_pred eeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCC-----CeEEEecCCCCeeEEEeEEecCCc
Q 004766 181 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSE-----DILCWKDPEHPKYIFSGHVTEDGQ 255 (732)
Q Consensus 181 ~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~-----~~~v~~~~~~~~~~~~~~~SpDg~ 255 (732)
.+++|++.-..-+.+. .....|.+|++.....+ ...+|..- ...+..++|.+-.+
T Consensus 181 ~glsWn~~~~g~Lls~------------------~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h--~~~VeDV~~h~~h~ 240 (422)
T KOG0264|consen 181 YGLSWNRQQEGTLLSG------------------SDDHTICLWDINAESKEDKVVDPKTIFSGH--EDVVEDVAWHPLHE 240 (422)
T ss_pred cccccccccceeEeec------------------cCCCcEEEEeccccccCCccccceEEeecC--Ccceehhhccccch
Confidence 5688988766655553 23456888888654432 23344432 23456788999888
Q ss_pred EEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceE--EEEEecCCeEEEEeCCCCCCceEEEEe
Q 004766 256 YLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVD 333 (732)
Q Consensus 256 ~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d 333 (732)
.|+....++ ..+.++|+.+.+. . ...........+ ..|.|-+..++.... ....|.++|
T Consensus 241 ~lF~sv~dd----~~L~iwD~R~~~~-----------~-~~~~~~ah~~~vn~~~fnp~~~~ilAT~S---~D~tV~LwD 301 (422)
T KOG0264|consen 241 DLFGSVGDD----GKLMIWDTRSNTS-----------K-PSHSVKAHSAEVNCVAFNPFNEFILATGS---ADKTVALWD 301 (422)
T ss_pred hhheeecCC----CeEEEEEcCCCCC-----------C-CcccccccCCceeEEEeCCCCCceEEecc---CCCcEEEee
Confidence 887666443 5688889875211 1 111222222222 247776665554332 245799999
Q ss_pred CCCCC-CceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCCC-Cceee---------e-cccc---cceee
Q 004766 334 LKEPN-DWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKN-GSLLH---------Q-LPIE---IGSVN 397 (732)
Q Consensus 334 ~~~~~-~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~-g~~~~---------~-l~~~---~g~v~ 397 (732)
+.... ....+-.+ +..+-.+.|+++ ..+++++..++ ++.+||+.. |+... + |-.+ ...|.
T Consensus 302 lRnL~~~lh~~e~H--~dev~~V~WSPh~etvLASSg~D~--rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~ 377 (422)
T KOG0264|consen 302 LRNLNKPLHTFEGH--EDEVFQVEWSPHNETVLASSGTDR--RLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVS 377 (422)
T ss_pred chhcccCceeccCC--CcceEEEEeCCCCCceeEecccCC--cEEEEeccccccccChhhhccCCcceeEEecCcccccc
Confidence 98765 22233233 355778999985 56888877774 677888741 22100 0 1111 23456
Q ss_pred EeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 398 AISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 398 ~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
.++++|..+.+..+.+.. ..+-++.++
T Consensus 378 DfsWnp~ePW~I~SvaeD---N~LqIW~~s 404 (422)
T KOG0264|consen 378 DFSWNPNEPWTIASVAED---NILQIWQMA 404 (422)
T ss_pred cccCCCCCCeEEEEecCC---ceEEEeecc
Confidence 677778777776666554 345555443
No 365
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=96.27 E-value=0.16 Score=51.94 Aligned_cols=172 Identities=14% Similarity=0.064 Sum_probs=91.2
Q ss_pred cCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCC
Q 004766 153 SGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSED 232 (732)
Q Consensus 153 ~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~ 232 (732)
+|+...+|.+||+..+...........-..++-+ . ..+++ .....+|..|++-++.
T Consensus 278 sgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~--~-~~~~S------------------gH~DkkvRfwD~Rs~~--- 333 (459)
T KOG0288|consen 278 SGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCS--I-SDVIS------------------GHFDKKVRFWDIRSAD--- 333 (459)
T ss_pred eccccchhhhhhhhhhheeccccccccccceEec--c-eeeee------------------cccccceEEEeccCCc---
Confidence 3555678999999876644322221111233332 1 12222 1233468888865542
Q ss_pred eEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEE--eeecccceEEEEE
Q 004766 233 ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVK--LIDGFDAQYEVIA 310 (732)
Q Consensus 233 ~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~s 310 (732)
.+.+-+- .+-+.++..|+||..|+..+.+ ..+-++|+.+.+.. .+... .....+-.-.+||
T Consensus 334 -~~~sv~~-gg~vtSl~ls~~g~~lLsssRD-----dtl~viDlRt~eI~----------~~~sA~g~k~asDwtrvvfS 396 (459)
T KOG0288|consen 334 -KTRSVPL-GGRVTSLDLSMDGLELLSSSRD-----DTLKVIDLRTKEIR----------QTFSAEGFKCASDWTRVVFS 396 (459)
T ss_pred -eeeEeec-CcceeeEeeccCCeEEeeecCC-----CceeeeecccccEE----------EEeeccccccccccceeEEC
Confidence 2222222 2356789999999999766432 23667787763200 00000 0111122223699
Q ss_pred ecCCeEEEEeCCCCCCceEEEEeCCCCCCceEecc-CCCCCceeEEEEecCCEEEEEEecC
Q 004766 311 NDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIP-EAERDVLESATAVNLNQMIVSYLSD 370 (732)
Q Consensus 311 ~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~~l~~~~~~~~~~l~~~~~~~ 370 (732)
|++++++- +..++.|+.+++.+++ ...+.. ...+..|..+.|.+.+.-++....+
T Consensus 397 pd~~YvaA----GS~dgsv~iW~v~tgK-lE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~ 452 (459)
T KOG0288|consen 397 PDGSYVAA----GSADGSVYIWSVFTGK-LEKVLSLSTSNAAITSLSWNPSGSGLLSADKQ 452 (459)
T ss_pred CCCceeee----ccCCCcEEEEEccCce-EEEEeccCCCCcceEEEEEcCCCchhhcccCC
Confidence 99887663 3446789999999887 333332 2222357788888644333344444
No 366
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.25 E-value=0.088 Score=54.01 Aligned_cols=181 Identities=10% Similarity=0.071 Sum_probs=95.8
Q ss_pred eeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEE
Q 004766 181 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 260 (732)
Q Consensus 181 ~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~ 260 (732)
..+++++||+.++.... ...++.|+.-+.. ++.++..+..-+-++.|||||+.|+..
T Consensus 148 k~vaf~~~gs~latgg~-------------------dg~lRv~~~Ps~~----t~l~e~~~~~eV~DL~FS~dgk~lasi 204 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGT-------------------DGTLRVWEWPSML----TILEEIAHHAEVKDLDFSPDGKFLASI 204 (398)
T ss_pred eEEEEcCCCCEeeeccc-------------------cceEEEEecCcch----hhhhhHhhcCccccceeCCCCcEEEEe
Confidence 45788888887776532 2245555543221 222233333344588999999999887
Q ss_pred EecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceE----EEEEec--CCeEEEEeCCCCCCceEEEEeC
Q 004766 261 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY----EVIAND--DTVFTFLTNKDAPKYKIIRVDL 334 (732)
Q Consensus 261 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~s~d--g~~l~~~s~~~~~~~~l~~~d~ 334 (732)
+.+ ...+|+..++. ++..++. ++..+ ..|+.| +..+++.++.. +...+..+++
T Consensus 205 g~d------~~~VW~~~~g~-------------~~a~~t~-~~k~~~~~~cRF~~d~~~~~l~laa~~~-~~~~v~~~~~ 263 (398)
T KOG0771|consen 205 GAD------SARVWSVNTGA-------------ALARKTP-FSKDEMFSSCRFSVDNAQETLRLAASQF-PGGGVRLCDI 263 (398)
T ss_pred cCC------ceEEEEeccCc-------------hhhhcCC-cccchhhhhceecccCCCceEEEEEecC-CCCceeEEEe
Confidence 643 24456666641 1222221 11111 235544 34555555542 2223333443
Q ss_pred C--CCC---CceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecc-cccceeeEeecccCCcEE
Q 004766 335 K--EPN---DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP-IEIGSVNAISARREDSVV 408 (732)
Q Consensus 335 ~--~~~---~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~-~~~g~v~~~~~s~d~~~l 408 (732)
. .+. .++..+.. ...++.+.++.++++++....+| .+-+++..+=+...-++ .+.+.|..+.++||.+.+
T Consensus 264 ~~w~~~~~l~~~~~~~~--~~siSsl~VS~dGkf~AlGT~dG--sVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~ 339 (398)
T KOG0771|consen 264 SLWSGSNFLRLRKKIKR--FKSISSLAVSDDGKFLALGTMDG--SVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYL 339 (398)
T ss_pred eeeccccccchhhhhhc--cCcceeEEEcCCCcEEEEeccCC--cEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcc
Confidence 2 221 12222222 24688899998777777777665 45566654322222222 236678889999988755
Q ss_pred E
Q 004766 409 F 409 (732)
Q Consensus 409 ~ 409 (732)
.
T Consensus 340 ~ 340 (398)
T KOG0771|consen 340 A 340 (398)
T ss_pred c
Confidence 4
No 367
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=96.24 E-value=0.13 Score=51.99 Aligned_cols=118 Identities=15% Similarity=0.099 Sum_probs=78.4
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
.-.++.+.|++ .-.+|+.+ -..+|++|||++|........+..+..+..+|..+.|+..+.+
T Consensus 260 t~~Vs~V~w~d--~~v~yS~S----wDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssd------------ 321 (423)
T KOG0313|consen 260 TEPVSSVVWSD--ATVIYSVS----WDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSD------------ 321 (423)
T ss_pred ccceeeEEEcC--CCceEeec----ccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCC------------
Confidence 34688999998 44778763 2369999999999865443444346788899988877765432
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
..+.+|+-.++... +.......+..|+.++.|+|-..++++..+.. +.+.++|+.+
T Consensus 322 -------r~irl~DPR~~~gs-~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D----~t~klWDvRS 377 (423)
T KOG0313|consen 322 -------RHIRLWDPRTGDGS-VVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYD----NTVKLWDVRS 377 (423)
T ss_pred -------CceeecCCCCCCCc-eeEEeeecchhhhhheecCCCCceEEEEEecC----CeEEEEEecc
Confidence 24667776555322 23333333455888999999999998876543 3355667655
No 368
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.24 E-value=0.69 Score=46.40 Aligned_cols=168 Identities=12% Similarity=-0.018 Sum_probs=90.1
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
..++++|+||+.++++..+ .....|+....+.... .+... .-...++|+++|...++
T Consensus 26 ~~s~AvS~dg~~~A~v~~~----------------~~~~~L~~~~~~~~~~---~~~~g----~~l~~PS~d~~g~~W~v 82 (253)
T PF10647_consen 26 VTSPAVSPDGSRVAAVSEG----------------DGGRSLYVGPAGGPVR---PVLTG----GSLTRPSWDPDGWVWTV 82 (253)
T ss_pred ccceEECCCCCeEEEEEEc----------------CCCCEEEEEcCCCcce---eeccC----CccccccccCCCCEEEE
Confidence 4789999999999998722 2334688877665432 22222 13458999999665544
Q ss_pred EEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-cc--cceEEEEEecCCeEEEEeCCCCCCceEEEEeCCC
Q 004766 260 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GF--DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE 336 (732)
Q Consensus 260 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~~--~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 336 (732)
... .. ...++. +..++.. . ...+-. .. ...-..+||||.+++++...++ ..+|+..-+..
T Consensus 83 ~~~-~~--~~~~~~-~~~~g~~-----------~-~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~-~~~v~va~V~r 145 (253)
T PF10647_consen 83 DDG-SG--GVRVVR-DSASGTG-----------E-PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGG-GGRVYVAGVVR 145 (253)
T ss_pred EcC-CC--ceEEEE-ecCCCcc-----------e-eEEecccccCCceEEEEECCCCcEEEEEEecCC-CCeEEEEEEEe
Confidence 332 11 222332 3222210 0 011111 11 1111248999999999886543 35677664421
Q ss_pred ---C--C---CceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeec
Q 004766 337 ---P--N---DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQL 389 (732)
Q Consensus 337 ---~--~---~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l 389 (732)
+ . ....+.+.. ...+.++.|.+++.|++.....+......+..+ |...+.+
T Consensus 146 ~~~g~~~~l~~~~~~~~~~-~~~v~~v~W~~~~~L~V~~~~~~~~~~~~v~~d-G~~~~~l 204 (253)
T PF10647_consen 146 DGDGVPRRLTGPRRVAPPL-LSDVTDVAWSDDSTLVVLGRSAGGPVVRLVSVD-GGPSTPL 204 (253)
T ss_pred CCCCCcceeccceEecccc-cCcceeeeecCCCEEEEEeCCCCCceeEEEEcc-CCccccc
Confidence 2 1 122333221 345678999987788777766654433345555 4332444
No 369
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=96.20 E-value=1.1 Score=49.99 Aligned_cols=231 Identities=15% Similarity=0.082 Sum_probs=122.6
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
+..+.+.- |..+.++ |+...+++|||..+|+.+....+... ..-.-.-+. .+...
T Consensus 252 V~~l~~~~-~~~~lvs----gS~D~t~rvWd~~sg~C~~~l~gh~s-tv~~~~~~~-~~~~s------------------ 306 (537)
T KOG0274|consen 252 VWGLAFPS-GGDKLVS----GSTDKTERVWDCSTGECTHSLQGHTS-SVRCLTIDP-FLLVS------------------ 306 (537)
T ss_pred ceeEEEec-CCCEEEE----EecCCcEEeEecCCCcEEEEecCCCc-eEEEEEccC-ceEee------------------
Confidence 44555543 3334444 33346899999999985432221111 111222122 22222
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 293 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 293 (732)
..++.+|++|++.++. .+.++.+ +...+..+.. ++..++..+.++ .|-+++..+++
T Consensus 307 gs~D~tVkVW~v~n~~--~l~l~~~--h~~~V~~v~~--~~~~lvsgs~d~-----~v~VW~~~~~~------------- 362 (537)
T KOG0274|consen 307 GSRDNTVKVWDVTNGA--CLNLLRG--HTGPVNCVQL--DEPLLVSGSYDG-----TVKVWDPRTGK------------- 362 (537)
T ss_pred ccCCceEEEEeccCcc--eEEEecc--ccccEEEEEe--cCCEEEEEecCc-----eEEEEEhhhce-------------
Confidence 1356789999998653 3344443 2223334443 466666555433 36667766532
Q ss_pred CcEEeeecccceEEEEEecC-CeEEEEeCCCCCCceEEEEeCCCC-CCceEeccCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 294 PFVKLIDGFDAQYEVIANDD-TVFTFLTNKDAPKYKIIRVDLKEP-NDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 294 ~~~~l~~~~~~~~~~~s~dg-~~l~~~s~~~~~~~~l~~~d~~~~-~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
.+..+.......+. +..++ .+++= ... +..|..+|+.+. +....+-.+. ..+..+... +.+++....++
T Consensus 363 cl~sl~gH~~~V~s-l~~~~~~~~~S-gs~---D~~IkvWdl~~~~~c~~tl~~h~--~~v~~l~~~--~~~Lvs~~aD~ 433 (537)
T KOG0274|consen 363 CLKSLSGHTGRVYS-LIVDSENRLLS-GSL---DTTIKVWDLRTKRKCIHTLQGHT--SLVSSLLLR--DNFLVSSSADG 433 (537)
T ss_pred eeeeecCCcceEEE-EEecCcceEEe-eee---ccceEeecCCchhhhhhhhcCCc--ccccccccc--cceeEeccccc
Confidence 23344332222222 33445 44442 222 356888999888 5444443333 333333332 45666776664
Q ss_pred eeEEEEEeCCCCceeeecccc-cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 372 KYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.|.+||..+++.++.+..+ .+.++.+... +..++..+. ...+..+|+.+++
T Consensus 434 --~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~---~~~il~s~~---~~~~~l~dl~~~~ 485 (537)
T KOG0274|consen 434 --TIKLWDAEEGECLRTLEGRHVGGVSALALG---KEEILCSSD---DGSVKLWDLRSGT 485 (537)
T ss_pred --cEEEeecccCceeeeeccCCcccEEEeecC---cceEEEEec---CCeeEEEecccCc
Confidence 8999999888887777763 4666666543 233444333 4567788988875
No 370
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=96.15 E-value=0.06 Score=53.68 Aligned_cols=63 Identities=10% Similarity=-0.123 Sum_probs=50.2
Q ss_pred CCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHH
Q 004766 648 QYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGF 721 (732)
Q Consensus 648 ~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 721 (732)
..+|-|.+.+.+|..|++.+..++++..++. |.++....+.+++|...-..+. .+....+.+|
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~----------G~~V~~~~f~~S~HV~H~r~~p-~~Y~~~v~~f 239 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRK----------GWDVRAEKFEDSPHVAHLRKHP-DRYWRAVDEF 239 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHc----------CCeEEEecCCCCchhhhcccCH-HHHHHHHHhh
Confidence 4578999999999999999999999999987 9999999999999986533222 3444455555
No 371
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=96.14 E-value=1.6 Score=43.12 Aligned_cols=107 Identities=8% Similarity=-0.078 Sum_probs=65.8
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec-ccccceeeeeEEEEeCCc--EEEEEEecCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWFKFSSIAWTHDSK--GFFYSRYPAPKEGKDM 206 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~-~~~~~~~~~~~~WspDg~--~l~y~~~~~~~~~~~~ 206 (732)
+.+.+....|-|=..=+. . .++-..++.|||..|-+..- ...++ .+.+-+|||=.. .|+-+.
T Consensus 100 Hky~iss~~WyP~DtGmF-t---ssSFDhtlKVWDtnTlQ~a~~F~me~-~VYshamSp~a~sHcLiA~g---------- 164 (397)
T KOG4283|consen 100 HKYAISSAIWYPIDTGMF-T---SSSFDHTLKVWDTNTLQEAVDFKMEG-KVYSHAMSPMAMSHCLIAAG---------- 164 (397)
T ss_pred ceeeeeeeEEeeecCcee-e---cccccceEEEeecccceeeEEeecCc-eeehhhcChhhhcceEEEEe----------
Confidence 356777777777444332 2 23445799999998866332 22333 246678888653 233221
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEec
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEE 263 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 263 (732)
.+..+|.+-++.++.-... ..+ +..-+..+.|||...|++...+.
T Consensus 165 --------tr~~~VrLCDi~SGs~sH~--LsG--Hr~~vlaV~Wsp~~e~vLatgsa 209 (397)
T KOG4283|consen 165 --------TRDVQVRLCDIASGSFSHT--LSG--HRDGVLAVEWSPSSEWVLATGSA 209 (397)
T ss_pred --------cCCCcEEEEeccCCcceee--ecc--ccCceEEEEeccCceeEEEecCC
Confidence 2445788888887754432 222 23345789999999999887654
No 372
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.05 E-value=1.6 Score=46.74 Aligned_cols=210 Identities=11% Similarity=-0.033 Sum_probs=115.7
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
.+..++++|+++.... .. ...+.++|.++-..+....-+....+++++||++.+|++....
T Consensus 77 ~~i~v~~~~~~vyv~~-~~---~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~--------------- 137 (381)
T COG3391 77 AGVAVNPAGNKVYVTT-GD---SNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGN--------------- 137 (381)
T ss_pred cceeeCCCCCeEEEec-CC---CCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEeccc---------------
Confidence 4678899998765442 22 2478999977766443222221347899999999888874210
Q ss_pred CcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCC
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLP 294 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 294 (732)
....+...+-.+...... +..+. .+ ..++++|+|+.++.... ..+.+.+++.++.... + ...
T Consensus 138 -~~~~vsvid~~t~~~~~~-~~vG~-~P---~~~a~~p~g~~vyv~~~----~~~~v~vi~~~~~~v~--~------~~~ 199 (381)
T COG3391 138 -GNNTVSVIDAATNKVTAT-IPVGN-TP---TGVAVDPDGNKVYVTNS----DDNTVSVIDTSGNSVV--R------GSV 199 (381)
T ss_pred -CCceEEEEeCCCCeEEEE-EecCC-Cc---ceEEECCCCCeEEEEec----CCCeEEEEeCCCccee--c------ccc
Confidence 245677777665432222 22221 22 57899999999876652 2467888886652100 0 000
Q ss_pred cEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCee
Q 004766 295 FVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKY 373 (732)
Q Consensus 295 ~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~ 373 (732)
......+.......++++|..+|+.-... ....+..+|..++.......+.... ....+...++ ..+++.... ..
T Consensus 200 ~~~~~~~~~P~~i~v~~~g~~~yV~~~~~-~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~--~~ 275 (381)
T COG3391 200 GSLVGVGTGPAGIAVDPDGNRVYVANDGS-GSNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQ--GG 275 (381)
T ss_pred ccccccCCCCceEEECCCCCEEEEEeccC-CCceEEEEeCCCceEEEeccccccC-CCCceeECCCCCEEEEEecC--CC
Confidence 00011111112235889999888654432 2357889998876521111222211 2334555654 445554433 35
Q ss_pred EEEEEeCCCCce
Q 004766 374 VLQIRDLKNGSL 385 (732)
Q Consensus 374 ~l~~~d~~~g~~ 385 (732)
.+.+.|..+...
T Consensus 276 ~V~vid~~~~~v 287 (381)
T COG3391 276 TVSVIDGATDRV 287 (381)
T ss_pred eEEEEeCCCCce
Confidence 788888765544
No 373
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.03 E-value=0.72 Score=49.98 Aligned_cols=193 Identities=11% Similarity=0.018 Sum_probs=107.4
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccce-eeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWF-KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
...|=+--++++ .|++..+|+|++..|++.+....... -...++-.|---.++-+++
T Consensus 60 a~kfiaRknWiv-----~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSD----------------- 117 (794)
T KOG0276|consen 60 AAKFIARKNWIV-----TGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSD----------------- 117 (794)
T ss_pred hheeeeccceEE-----EecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCC-----------------
Confidence 344444445555 45677899999999998654221111 1245666665555544332
Q ss_pred CcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCC
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLP 294 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 294 (732)
...|.+|+....=. -...|++ +..|++.+++.|...--+.+.+-. .+ +-++.+... .+
T Consensus 118 --Dm~iKlW~we~~wa-~~qtfeG--H~HyVMqv~fnPkD~ntFaS~sLD--rT--VKVWslgs~-------------~~ 175 (794)
T KOG0276|consen 118 --DMTIKLWDWENEWA-CEQTFEG--HEHYVMQVAFNPKDPNTFASASLD--RT--VKVWSLGSP-------------HP 175 (794)
T ss_pred --ccEEEEeeccCcee-eeeEEcC--cceEEEEEEecCCCccceeeeecc--cc--EEEEEcCCC-------------CC
Confidence 23455565543321 2346655 345888999998544433332211 13 444555441 11
Q ss_pred cEEeeecccceEE--EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCe
Q 004766 295 FVKLIDGFDAQYE--VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVK 372 (732)
Q Consensus 295 ~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~ 372 (732)
--.+. +....+. .+-+.|++=|+++..+ ...+-.+|-.+..+.++|-.|. ..+..+.+.+.=-++++..+||.
T Consensus 176 nfTl~-gHekGVN~Vdyy~~gdkpylIsgaD--D~tiKvWDyQtk~CV~TLeGHt--~Nvs~v~fhp~lpiiisgsEDGT 250 (794)
T KOG0276|consen 176 NFTLE-GHEKGVNCVDYYTGGDKPYLISGAD--DLTIKVWDYQTKSCVQTLEGHT--NNVSFVFFHPELPIIISGSEDGT 250 (794)
T ss_pred ceeee-ccccCcceEEeccCCCcceEEecCC--CceEEEeecchHHHHHHhhccc--ccceEEEecCCCcEEEEecCCcc
Confidence 22232 2222222 2345577777777643 4457778888877677776665 55666776664458889899964
Q ss_pred eEEEEEe
Q 004766 373 YVLQIRD 379 (732)
Q Consensus 373 ~~l~~~d 379 (732)
+++|.
T Consensus 251 --vriWh 255 (794)
T KOG0276|consen 251 --VRIWN 255 (794)
T ss_pred --EEEec
Confidence 44554
No 374
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=96.02 E-value=0.35 Score=50.21 Aligned_cols=199 Identities=13% Similarity=0.016 Sum_probs=113.0
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCce----e-cccc---cceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV----E-ADAL---SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~----~-~~~~---~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
+++|++.-.--.. +|++..+|.+||+..... + +.+. .......++|.|-...+|-+.
T Consensus 182 glsWn~~~~g~Ll----s~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv----------- 246 (422)
T KOG0264|consen 182 GLSWNRQQEGTLL----SGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSV----------- 246 (422)
T ss_pred ccccccccceeEe----eccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheee-----------
Confidence 4677775543332 234457899999975332 1 1111 111235788998777666553
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
.....+.+|++-++..+.... ...+..-+..++|.|=+.+|+.+.+. ...|.++|+....
T Consensus 247 -------~dd~~L~iwD~R~~~~~~~~~--~~ah~~~vn~~~fnp~~~~ilAT~S~----D~tV~LwDlRnL~------- 306 (422)
T KOG0264|consen 247 -------GDDGKLMIWDTRSNTSKPSHS--VKAHSAEVNCVAFNPFNEFILATGSA----DKTVALWDLRNLN------- 306 (422)
T ss_pred -------cCCCeEEEEEcCCCCCCCccc--ccccCCceeEEEeCCCCCceEEeccC----CCcEEEeechhcc-------
Confidence 234578889887532111111 11223335678999988888776542 3458899987732
Q ss_pred ccCCCCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCC-----------CceEeccCCC-CCceeE
Q 004766 288 KRDGLLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-----------DWFEVIPEAE-RDVLES 354 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-----------~~~~l~~~~~-~~~l~~ 354 (732)
.++-.+....+..+. -|||+.+.++..+.. ..+|.++|+..-. ....|+.|.. ...+.+
T Consensus 307 -----~~lh~~e~H~dev~~V~WSPh~etvLASSg~---D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~D 378 (422)
T KOG0264|consen 307 -----KPLHTFEGHEDEVFQVEWSPHNETVLASSGT---DRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSD 378 (422)
T ss_pred -----cCceeccCCCcceEEEEeCCCCCceeEeccc---CCcEEEEeccccccccChhhhccCCcceeEEecCccccccc
Confidence 123333333333333 399988877765543 4578888875421 1233444432 245778
Q ss_pred EEEecC-CEEEEEEecCCeeEEEE
Q 004766 355 ATAVNL-NQMIVSYLSDVKYVLQI 377 (732)
Q Consensus 355 ~~~~~~-~~l~~~~~~~g~~~l~~ 377 (732)
|.|.+. -.++.+..+++.-+||.
T Consensus 379 fsWnp~ePW~I~SvaeDN~LqIW~ 402 (422)
T KOG0264|consen 379 FSWNPNEPWTIASVAEDNILQIWQ 402 (422)
T ss_pred ccCCCCCCeEEEEecCCceEEEee
Confidence 888874 46777888885444443
No 375
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.01 E-value=0.013 Score=63.42 Aligned_cols=102 Identities=22% Similarity=0.307 Sum_probs=72.2
Q ss_pred EEEEcCCCCeeEEEEEe-CCCCCceEEeCCCCcCCCCC-EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec
Q 004766 95 YFHNTGLQPQSVLYVQD-SLDAKAKVLLDPNTLSDDGT-AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA 172 (732)
Q Consensus 95 ~~~~~~~~~~~~l~~r~-~~~~~~~~l~D~~~l~~~~~-~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~ 172 (732)
|.++...++.. ++.-. ..+...+|+||.|++++++. +..+-.+.|||.++|||.....|.+.+++ |.++....+..
T Consensus 100 ~~rr~~~~e~~-~~ld~~~~~dd~tV~Ld~~~~aed~~Y~~~gls~~spD~~~ia~~~~~~~~e~~~~-v~~~~~~~~~~ 177 (712)
T KOG2237|consen 100 YCRRLLEKEEE-VFLDPNALGDDGTVLLDTNQIAEDFKYFAYGLSESSPDHKYIAYTKDTEGKELFTV-VIDVKFSGPVW 177 (712)
T ss_pred HHHhhhhcccc-eecCCccCCCCceEEechhhhhhcCCceEEeecccCCCceEEEEEEcCCCCcccee-eeeeccCCcee
Confidence 44444433333 44332 22334579999999998865 55555669999999999999999999998 89998877653
Q ss_pred ccccceeeeeEEEEe-CCcEEEEEEecC
Q 004766 173 DALSWFKFSSIAWTH-DSKGFFYSRYPA 199 (732)
Q Consensus 173 ~~~~~~~~~~~~Wsp-Dg~~l~y~~~~~ 199 (732)
.... -.++.++|.. ||..|.|...++
T Consensus 178 ~~~~-~g~~y~~w~~~dg~~l~~~t~~~ 204 (712)
T KOG2237|consen 178 THDG-KGVSYLAWAKQDGEDLLYGTEDE 204 (712)
T ss_pred eccC-CceEeeeecccCCceeeeeeecc
Confidence 3221 1358899988 898888877654
No 376
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=95.99 E-value=2.8 Score=44.86 Aligned_cols=128 Identities=13% Similarity=0.168 Sum_probs=66.5
Q ss_pred CCeEEEEeCCCCCCceEEEEeCCCCC-CceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeec-c
Q 004766 313 DTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQL-P 390 (732)
Q Consensus 313 g~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l-~ 390 (732)
++.+|+.+. ...|+.+|+++++ .|..-. .....+...+ +++|+.. .+ ..|+.+|..+|+.+-+. .
T Consensus 241 ~~~vy~~~~----~g~l~a~d~~tG~~~W~~~~-----~~~~~p~~~~-~~vyv~~-~~--G~l~~~d~~tG~~~W~~~~ 307 (377)
T TIGR03300 241 GGQVYAVSY----QGRVAALDLRSGRVLWKRDA-----SSYQGPAVDD-NRLYVTD-AD--GVVVALDRRSGSELWKNDE 307 (377)
T ss_pred CCEEEEEEc----CCEEEEEECCCCcEEEeecc-----CCccCceEeC-CEEEEEC-CC--CeEEEEECCCCcEEEcccc
Confidence 567776543 2469999998876 233211 1122334444 6777664 33 47999999888764333 2
Q ss_pred cccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEeecCCCCCCCC-ceEEEEEEEccCC
Q 004766 391 IEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDRSE-FHVHQVFVPSKDG 461 (732)
Q Consensus 391 ~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~s~dG 461 (732)
+.......+. ..++.+++.- .-..+|.+|..+|+. ...++-. ...+.... +.-+.+.+.+.||
T Consensus 308 ~~~~~~ssp~--i~g~~l~~~~----~~G~l~~~d~~tG~~-~~~~~~~-~~~~~~sp~~~~~~l~v~~~dG 371 (377)
T TIGR03300 308 LKYRQLTAPA--VVGGYLVVGD----FEGYLHWLSREDGSF-VARLKTD-GSGIASPPVVVGDGLLVQTRDG 371 (377)
T ss_pred ccCCccccCE--EECCEEEEEe----CCCEEEEEECCCCCE-EEEEEcC-CCccccCCEEECCEEEEEeCCc
Confidence 2222222221 1345565432 235799999988851 2222210 00122222 2335577777787
No 377
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=95.99 E-value=0.15 Score=49.16 Aligned_cols=207 Identities=16% Similarity=0.086 Sum_probs=106.6
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcC-----cEEEEEcccCC----CCCchhHHh----cccccCCccH----H
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLG-----AVFCIANIRGG----GEYGEEWHK----GGALAKKQNC----F 542 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G-----~~v~~~~~rG~----g~~g~~~~~----~~~~~~~~~~----~ 542 (732)
..|+ ||+||..|... ++.....+++. .+ -.++.++.-|+ |.+...-.. -+... ...+ -
T Consensus 45 ~iPT-IfIhGsgG~as--S~~~Mv~ql~~-~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~-n~~s~~~~s 119 (288)
T COG4814 45 AIPT-IFIHGSGGTAS--SLNGMVNQLLP-DYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFED-NTASGLDQS 119 (288)
T ss_pred ccce-EEEecCCCChh--HHHHHHHHhhh-cccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEec-CcCchhhHH
Confidence 4564 67888777643 33333445554 44 56777777765 222211111 11111 1122 2
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC------CCeeeEEEEcCCcc-cccccccCCCCCccccccC
Q 004766 543 DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR------PDLFGCALAHVGVM-DMLRYHKFTIGHAWVSDFG 615 (732)
Q Consensus 543 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~p~~-d~~~~~~~~~~~~~~~~~g 615 (732)
.-+..++.+|.++--+ .++-++||||||.-...++..+ |-+=+-+.+..||- ..+.... +... -..-
T Consensus 120 ~wlk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de-~v~~---v~~~ 193 (288)
T COG4814 120 KWLKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDE-TVTD---VLKD 193 (288)
T ss_pred HHHHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCc-chhe---eecc
Confidence 3456788899887433 5899999999999888777754 44444444445543 0111000 0000 0011
Q ss_pred CC--CCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCC------CCCCCchHHHHHHHHHHHhhcCCCCCCC
Q 004766 616 CS--EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADH------DDRVVPLHSLKLLATMQYVLCTSLENSP 687 (732)
Q Consensus 616 ~p--~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~------D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 687 (732)
+| .....++++... +..+. ...-+|++.|+- |.+||...++-...-+...
T Consensus 194 ~~~~~~t~y~~y~~~n--~k~v~-----------~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~--------- 251 (288)
T COG4814 194 GPGLIKTPYYDYIAKN--YKKVS-----------PNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKN--------- 251 (288)
T ss_pred CccccCcHHHHHHHhc--ceeCC-----------CCcEEEEEecccccCCcCCCceechHhHHHHHHhccC---------
Confidence 11 111223333221 12222 245789999975 5688888888777766654
Q ss_pred CCCCEEEEEeCC--CCCCCCCchHHHHHHHHHHHHHHH
Q 004766 688 QTNPIIGRIERK--AGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 688 ~~~~~~~~~~~~--~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
++.+.-.+|++ +-|.-..... .....+..||.
T Consensus 252 -~ksy~e~~~~Gk~a~Hs~lhen~---~v~~yv~~FLw 285 (288)
T COG4814 252 -GKSYIESLYKGKDARHSKLHENP---TVAKYVKNFLW 285 (288)
T ss_pred -cceeEEEeeeCCcchhhccCCCh---hHHHHHHHHhh
Confidence 66665556665 5675433222 33344556664
No 378
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.99 E-value=1.3 Score=42.69 Aligned_cols=221 Identities=10% Similarity=0.048 Sum_probs=121.4
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc-eeccccc-ceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI-VEADALS-WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~-~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
+-+++||+...-++++..-+| .|+++|+.-.. ++..-.+ ...+.++.|.+-.+..+.++.
T Consensus 63 LfdV~Wse~~e~~~~~a~GDG----SLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsS-------------- 124 (311)
T KOG0277|consen 63 LFDVAWSENHENQVIAASGDG----SLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSS-------------- 124 (311)
T ss_pred eeEeeecCCCcceEEEEecCc----eEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeec--------------
Confidence 457899999999998875444 68899953222 2221111 113478899987777777652
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
-...|.+|+..-+++ +.-|.+ +...++...|||--.-++.+.+... .-++|-++..+.
T Consensus 125 ----WD~TiKLW~~~r~~S--v~Tf~g--h~~~Iy~a~~sp~~~nlfas~Sgd~--~l~lwdvr~~gk------------ 182 (311)
T KOG0277|consen 125 ----WDGTIKLWDPNRPNS--VQTFNG--HNSCIYQAAFSPHIPNLFASASGDG--TLRLWDVRSPGK------------ 182 (311)
T ss_pred ----cCCceEeecCCCCcc--eEeecC--CccEEEEEecCCCCCCeEEEccCCc--eEEEEEecCCCc------------
Confidence 223466666554432 233433 3456778999997666655544332 344554444431
Q ss_pred CCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-CceEeccCCCCCceeEEEEecC-CEEEEEEec
Q 004766 292 LLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEAERDVLESATAVNL-NQMIVSYLS 369 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~ 369 (732)
...-.......-..-|+.....+++... .+..|..+|+..-. ...+|..+. ..+..+.+++. ..++.+.+-
T Consensus 183 --~~~i~ah~~Eil~cdw~ky~~~vl~Tg~---vd~~vr~wDir~~r~pl~eL~gh~--~AVRkvk~Sph~~~lLaSasY 255 (311)
T KOG0277|consen 183 --FMSIEAHNSEILCCDWSKYNHNVLATGG---VDNLVRGWDIRNLRTPLFELNGHG--LAVRKVKFSPHHASLLASASY 255 (311)
T ss_pred --eeEEEeccceeEeecccccCCcEEEecC---CCceEEEEehhhccccceeecCCc--eEEEEEecCcchhhHhhhccc
Confidence 1221111111112237776666665443 24468888887644 234554443 66788888873 346666666
Q ss_pred CCeeEEEEEeCCCCc-eeeecccccceeeEeeccc
Q 004766 370 DVKYVLQIRDLKNGS-LLHQLPIEIGSVNAISARR 403 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~-~~~~l~~~~g~v~~~~~s~ 403 (732)
| ...++||...+. .+++...+...+-++.++.
T Consensus 256 D--mT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~ 288 (311)
T KOG0277|consen 256 D--MTVRIWDPERQDSAIETVDHHTEFVCGLDWSL 288 (311)
T ss_pred c--ceEEecccccchhhhhhhhccceEEecccccc
Confidence 6 466777765332 2233333333333444443
No 379
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=95.99 E-value=0.3 Score=49.21 Aligned_cols=158 Identities=11% Similarity=0.066 Sum_probs=90.3
Q ss_pred CeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceE--EEEEecCCeEEEE
Q 004766 242 PKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY--EVIANDDTVFTFL 319 (732)
Q Consensus 242 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~ 319 (732)
-+|+..+++.|-..|++-.+.++ .+-++|++++. +..-..+.-... ..+|+. +=|+.
T Consensus 151 lgWVr~vavdP~n~wf~tgs~Dr-----tikIwDlatg~--------------LkltltGhi~~vr~vavS~r--HpYlF 209 (460)
T KOG0285|consen 151 LGWVRSVAVDPGNEWFATGSADR-----TIKIWDLATGQ--------------LKLTLTGHIETVRGVAVSKR--HPYLF 209 (460)
T ss_pred cceEEEEeeCCCceeEEecCCCc-----eeEEEEcccCe--------------EEEeecchhheeeeeeeccc--CceEE
Confidence 46888899999999876554433 36677998864 111111211111 125543 33333
Q ss_pred eCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEe
Q 004766 320 TNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAI 399 (732)
Q Consensus 320 s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~ 399 (732)
+.- ...++-.+|++..+-++....+- ..+..+.+.+...++++..+| +.+++||..+...+..+..+...|..+
T Consensus 210 s~g--edk~VKCwDLe~nkvIR~YhGHl--S~V~~L~lhPTldvl~t~grD--st~RvWDiRtr~~V~~l~GH~~~V~~V 283 (460)
T KOG0285|consen 210 SAG--EDKQVKCWDLEYNKVIRHYHGHL--SGVYCLDLHPTLDVLVTGGRD--STIRVWDIRTRASVHVLSGHTNPVASV 283 (460)
T ss_pred Eec--CCCeeEEEechhhhhHHHhcccc--ceeEEEeccccceeEEecCCc--ceEEEeeecccceEEEecCCCCcceeE
Confidence 332 23467788998765233222222 223444555545678888777 678899988665555555555556566
Q ss_pred ecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 400 SARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 400 ~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
...+-...++ +. ..-.++..+|+..|+
T Consensus 284 ~~~~~dpqvi-t~---S~D~tvrlWDl~agk 310 (460)
T KOG0285|consen 284 MCQPTDPQVI-TG---SHDSTVRLWDLRAGK 310 (460)
T ss_pred EeecCCCceE-Ee---cCCceEEEeeeccCc
Confidence 5555444443 22 233578888888775
No 380
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=95.98 E-value=2.5 Score=44.09 Aligned_cols=155 Identities=8% Similarity=0.075 Sum_probs=89.6
Q ss_pred eEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEE
Q 004766 182 SIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCI 261 (732)
Q Consensus 182 ~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 261 (732)
.++|--+-+.|+.+. ....+|.+|++.+++....+-. +..-+..+.|.|..-.+++..
T Consensus 248 ~Ls~n~~~~nVLaSg------------------saD~TV~lWD~~~g~p~~s~~~----~~k~Vq~l~wh~~~p~~LLsG 305 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASG------------------SADKTVKLWDVDTGKPKSSITH----HGKKVQTLEWHPYEPSVLLSG 305 (463)
T ss_pred HHHhccccceeEEec------------------CCCceEEEEEcCCCCcceehhh----cCCceeEEEecCCCceEEEec
Confidence 456766666666652 3456799999998876533221 222345788988777666665
Q ss_pred ecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-Cc
Q 004766 262 EENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-DW 340 (732)
Q Consensus 262 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~ 340 (732)
+. ...+-+.|..... .....|+ ...+.+-..|.|.....+|.+.. ++.|+-+|+.... ..
T Consensus 306 s~----D~~V~l~D~R~~~---------~s~~~wk---~~g~VEkv~w~~~se~~f~~~td---dG~v~~~D~R~~~~~v 366 (463)
T KOG0270|consen 306 SY----DGTVALKDCRDPS---------NSGKEWK---FDGEVEKVAWDPHSENSFFVSTD---DGTVYYFDIRNPGKPV 366 (463)
T ss_pred cc----cceEEeeeccCcc---------ccCceEE---eccceEEEEecCCCceeEEEecC---CceEEeeecCCCCCce
Confidence 32 2346677765311 0112221 11222333588876666665544 3479999988764 33
Q ss_pred eEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCC
Q 004766 341 FEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLK 381 (732)
Q Consensus 341 ~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~ 381 (732)
-.+-.|. ..|.++.+... -.++.+...+. .+.+|++.
T Consensus 367 wt~~AHd--~~ISgl~~n~~~p~~l~t~s~d~--~Vklw~~~ 404 (463)
T KOG0270|consen 367 WTLKAHD--DEISGLSVNIQTPGLLSTASTDK--VVKLWKFD 404 (463)
T ss_pred eEEEecc--CCcceEEecCCCCcceeeccccc--eEEEEeec
Confidence 4455665 56888888753 34666655554 45555554
No 381
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=95.97 E-value=0.053 Score=54.48 Aligned_cols=159 Identities=12% Similarity=0.160 Sum_probs=92.5
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
-++..++++|-..-|+-+. |++ ..|.++|+.++.++...+-..+-..++|+|. .+-|+..
T Consensus 188 Dti~svkfNpvETsILas~---~sD-rsIvLyD~R~~~Pl~KVi~~mRTN~IswnPe--afnF~~a-------------- 247 (433)
T KOG0268|consen 188 DSISSVKFNPVETSILASC---ASD-RSIVLYDLRQASPLKKVILTMRTNTICWNPE--AFNFVAA-------------- 247 (433)
T ss_pred CceeEEecCCCcchheeee---ccC-CceEEEecccCCccceeeeeccccceecCcc--ccceeec--------------
Confidence 3567788888877665443 333 5799999999998765444444578999993 3555542
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
...+.+|.+++-.- .+.+-++. ++..-.+++.+||-|+-++-.+.+.+ |.++....+... +.+
T Consensus 248 ---~ED~nlY~~DmR~l-~~p~~v~~--dhvsAV~dVdfsptG~EfvsgsyDks-----IRIf~~~~~~SR-diY----- 310 (433)
T KOG0268|consen 248 ---NEDHNLYTYDMRNL-SRPLNVHK--DHVSAVMDVDFSPTGQEFVSGSYDKS-----IRIFPVNHGHSR-DIY----- 310 (433)
T ss_pred ---cccccceehhhhhh-cccchhhc--ccceeEEEeccCCCcchhccccccce-----EEEeecCCCcch-hhh-----
Confidence 34567888886532 12233443 23345678999999999876554332 555555443210 000
Q ss_pred CCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCC
Q 004766 292 LLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLK 335 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 335 (732)
-+..-+..+. .||.|.+.++ +..+..+.+||.....
T Consensus 311 ------htkRMq~V~~Vk~S~Dskyi~--SGSdd~nvRlWka~As 347 (433)
T KOG0268|consen 311 ------HTKRMQHVFCVKYSMDSKYII--SGSDDGNVRLWKAKAS 347 (433)
T ss_pred ------hHhhhheeeEEEEeccccEEE--ecCCCcceeeeecchh
Confidence 0111111222 3888876443 4444457788887653
No 382
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=95.96 E-value=0.22 Score=52.76 Aligned_cols=164 Identities=12% Similarity=0.130 Sum_probs=91.6
Q ss_pred eeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEE
Q 004766 181 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 260 (732)
Q Consensus 181 ~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~ 260 (732)
..-.|+|||..|+-+. ....|..|....-... ++.+. ..-+..++|.|+...++|+
T Consensus 108 ~~gRW~~dGtgLlt~G-------------------EDG~iKiWSrsGMLRS--tl~Q~---~~~v~c~~W~p~S~~vl~c 163 (737)
T KOG1524|consen 108 SSGRWSPDGAGLLTAG-------------------EDGVIKIWSRSGMLRS--TVVQN---EESIRCARWAPNSNSIVFC 163 (737)
T ss_pred hhcccCCCCceeeeec-------------------CCceEEEEeccchHHH--HHhhc---CceeEEEEECCCCCceEEe
Confidence 5678999999998753 3335666665332111 11111 1134578999999999998
Q ss_pred EecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEE--EEEecCCeEEEEeCCCCCCceEEEEeCCCCC
Q 004766 261 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYE--VIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 338 (732)
Q Consensus 261 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 338 (732)
.. ..+++-+++-.. + ..+... .+.-+. .|++..+.++ + ++..++.-.+|..+..
T Consensus 164 ~g------~h~~IKpL~~n~------------k-~i~WkA-HDGiiL~~~W~~~s~lI~--s--gGED~kfKvWD~~G~~ 219 (737)
T KOG1524|consen 164 QG------GHISIKPLAANS------------K-IIRWRA-HDGLVLSLSWSTQSNIIA--S--GGEDFRFKIWDAQGAN 219 (737)
T ss_pred cC------CeEEEeeccccc------------c-eeEEec-cCcEEEEeecCcccccee--e--cCCceeEEeecccCcc
Confidence 64 346676665410 1 111111 122221 3776554333 2 2445666666754432
Q ss_pred CceEec-cCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEeecccCCcEEEEEE
Q 004766 339 DWFEVI-PEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFISF 412 (732)
Q Consensus 339 ~~~~l~-~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~d~~~l~~~~ 412 (732)
|+ ....+..|.+++|.+ +.+|+..+-+ .++ +..| .|++..+++|+||..+....
T Consensus 220 ----Lf~S~~~ey~ITSva~np-d~~~~v~S~n---t~R------------~~~p~~GSifnlsWS~DGTQ~a~gt 275 (737)
T KOG1524|consen 220 ----LFTSAAEEYAITSVAFNP-EKDYLLWSYN---TAR------------FSSPRVGSIFNLSWSADGTQATCGT 275 (737)
T ss_pred ----cccCChhccceeeeeecc-ccceeeeeee---eee------------ecCCCccceEEEEEcCCCceeeccc
Confidence 22 222357899999998 4666655433 111 2333 57777888888887765543
No 383
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=95.95 E-value=0.42 Score=46.92 Aligned_cols=135 Identities=14% Similarity=0.101 Sum_probs=74.9
Q ss_pred EeCCCCcCCCCC----EEEEeEEECCCCc-EEEEEEeccCCceEEEEEEECCCCceec-ccccceeeeeEEEEeCCcEEE
Q 004766 120 LLDPNTLSDDGT----AALIKVSVSEDAK-YLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWFKFSSIAWTHDSKGFF 193 (732)
Q Consensus 120 l~D~~~l~~~~~----~~~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl~~g~~~~-~~~~~~~~~~~~WspDg~~l~ 193 (732)
+.|.|++..-.. -.+..-.+||=.. +.+++. |.+..+|++.|+++|...- .......+-.+.|||-..+++
T Consensus 128 VWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~---gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vL 204 (397)
T KOG4283|consen 128 VWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAA---GTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVL 204 (397)
T ss_pred EeecccceeeEEeecCceeehhhcChhhhcceEEEE---ecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEE
Confidence 446666643211 2345566888443 333333 3334689999999998421 111222346899999999999
Q ss_pred EEEecCCCCCCCCCCCCcccCCcccEEEEEECCCC----------CCCCeEEEe-cCCCCeeEEEeEEecCCcEEEEEEe
Q 004766 194 YSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK----------QSEDILCWK-DPEHPKYIFSGHVTEDGQYLVMCIE 262 (732)
Q Consensus 194 y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~----------~~~~~~v~~-~~~~~~~~~~~~~SpDg~~l~~~~~ 262 (732)
++..- ...+.+|++... +.....+.+ .+.+.+-+.+++|+.||++++....
T Consensus 205 atgsa------------------Dg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gt 266 (397)
T KOG4283|consen 205 ATGSA------------------DGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGT 266 (397)
T ss_pred EecCC------------------CceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccC
Confidence 98431 123444444211 000011111 2222334568999999999986642
Q ss_pred cCCcceEEEEEEeCCCCC
Q 004766 263 ENCDPVNKVYYCDLSALP 280 (732)
Q Consensus 263 ~~~~~~~~l~~~d~~~~~ 280 (732)
.+++.+++...|.
T Consensus 267 -----d~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 267 -----DDRIRVWNMESGR 279 (397)
T ss_pred -----ccceEEeecccCc
Confidence 3456667766654
No 384
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=95.84 E-value=3.1 Score=44.05 Aligned_cols=242 Identities=8% Similarity=0.014 Sum_probs=120.0
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce-ecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV-EADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~-~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
+..+.|+.... +.+.+.+|.....|+..|=.++++ +....++. ...+-+-.+..+|.++
T Consensus 37 ~~s~~w~~~n~--lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~~~s~S~y~~s---------------- 96 (673)
T KOG4378|consen 37 DFSFNWQRRNF--LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--NAFCVACASQSLYEIS---------------- 96 (673)
T ss_pred ceeeeccccce--EEEeecCCceeEEEecccCCCCccceeeccccc--hHHHHhhhhcceeeec----------------
Confidence 55677776554 334445666555555555444542 11111111 1112222222344443
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
.+....|..|++...... .. ..++...+..+.+.-...||+-.+.. .+|.+..+.++.
T Consensus 97 -gG~~~~Vkiwdl~~kl~h-r~---lkdh~stvt~v~YN~~DeyiAsvs~g-----Gdiiih~~~t~~------------ 154 (673)
T KOG4378|consen 97 -GGQSGCVKIWDLRAKLIH-RF---LKDHQSTVTYVDYNNTDEYIASVSDG-----GDIIIHGTKTKQ------------ 154 (673)
T ss_pred -cCcCceeeehhhHHHHHh-hh---ccCCcceeEEEEecCCcceeEEeccC-----CcEEEEecccCc------------
Confidence 234456777777532111 01 11222233344444456666655432 346666666532
Q ss_pred CCcEEeeecccce--EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCc-eEeccCCCCCceeEEEEecC-CEEEEEEe
Q 004766 293 LPFVKLIDGFDAQ--YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW-FEVIPEAERDVLESATAVNL-NQMIVSYL 368 (732)
Q Consensus 293 ~~~~~l~~~~~~~--~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-~~l~~~~~~~~l~~~~~~~~-~~l~~~~~ 368 (732)
....+..+.... ...+++..+.++..... ++.+-++|+.+.... .-.-.|. ....++.+++. ..|+++..
T Consensus 155 -~tt~f~~~sgqsvRll~ys~skr~lL~~asd---~G~VtlwDv~g~sp~~~~~~~Hs--AP~~gicfspsne~l~vsVG 228 (673)
T KOG4378|consen 155 -KTTTFTIDSGQSVRLLRYSPSKRFLLSIASD---KGAVTLWDVQGMSPIFHASEAHS--APCRGICFSPSNEALLVSVG 228 (673)
T ss_pred -cccceecCCCCeEEEeecccccceeeEeecc---CCeEEEEeccCCCcccchhhhcc--CCcCcceecCCccceEEEec
Confidence 112222221211 22366755555544433 446778888765411 1111222 45567787763 56777766
Q ss_pred cCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
-| -+|++||..+.+....|+.. ...+.+++.++|-+|... +.-+++|.||+...+
T Consensus 229 ~D--kki~~yD~~s~~s~~~l~y~-~Plstvaf~~~G~~L~aG----~s~G~~i~YD~R~~k 283 (673)
T KOG4378|consen 229 YD--KKINIYDIRSQASTDRLTYS-HPLSTVAFSECGTYLCAG----NSKGELIAYDMRSTK 283 (673)
T ss_pred cc--ceEEEeecccccccceeeec-CCcceeeecCCceEEEee----cCCceEEEEecccCC
Confidence 66 58999997643333444432 234456777888655433 335789999997654
No 385
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=95.78 E-value=0.11 Score=51.82 Aligned_cols=219 Identities=15% Similarity=0.121 Sum_probs=112.0
Q ss_pred cCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCC
Q 004766 153 SGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSED 232 (732)
Q Consensus 153 ~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~ 232 (732)
+|....+|.|||..+-+.+..-.+... +-+..--|.+-|+-.+ -...|..|+..++..-.
T Consensus 212 SGlrDnTikiWD~n~~~c~~~L~GHtG-SVLCLqyd~rviisGS-------------------SDsTvrvWDv~tge~l~ 271 (499)
T KOG0281|consen 212 SGLRDNTIKIWDKNSLECLKILTGHTG-SVLCLQYDERVIVSGS-------------------SDSTVRVWDVNTGEPLN 271 (499)
T ss_pred cccccCceEEeccccHHHHHhhhcCCC-cEEeeeccceEEEecC-------------------CCceEEEEeccCCchhh
Confidence 366667999999887664432222211 3334444665333222 23468899998876443
Q ss_pred eEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEec
Q 004766 233 ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIAND 312 (732)
Q Consensus 233 ~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~d 312 (732)
+++ ...+ .+..+.++ ..+++-.+.+. .+-++|+.... ....+.+..+..+.+..+.-|
T Consensus 272 tli-hHce---aVLhlrf~--ng~mvtcSkDr-----siaVWdm~sps-----------~it~rrVLvGHrAaVNvVdfd 329 (499)
T KOG0281|consen 272 TLI-HHCE---AVLHLRFS--NGYMVTCSKDR-----SIAVWDMASPT-----------DITLRRVLVGHRAAVNVVDFD 329 (499)
T ss_pred HHh-hhcc---eeEEEEEe--CCEEEEecCCc-----eeEEEeccCch-----------HHHHHHHHhhhhhheeeeccc
Confidence 322 2222 23455554 34444443332 24555655421 111222222333333333334
Q ss_pred CCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc
Q 004766 313 DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE 392 (732)
Q Consensus 313 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~ 392 (732)
.+ |+++..+ .-.|-.++..+....+.|-.+. .-|..... . ++++++.+.+ ..|.+||...|+.++.|..+
T Consensus 330 ~k--yIVsASg--DRTikvW~~st~efvRtl~gHk--RGIAClQY-r-~rlvVSGSSD--ntIRlwdi~~G~cLRvLeGH 399 (499)
T KOG0281|consen 330 DK--YIVSASG--DRTIKVWSTSTCEFVRTLNGHK--RGIACLQY-R-DRLVVSGSSD--NTIRLWDIECGACLRVLEGH 399 (499)
T ss_pred cc--eEEEecC--CceEEEEeccceeeehhhhccc--ccceehhc-c-CeEEEecCCC--ceEEEEeccccHHHHHHhch
Confidence 44 4444432 2357777887876455555554 22322221 3 7899988877 58999999999887777654
Q ss_pred cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 393 IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 393 ~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
..-|..+. +|.+.++ |-.--+.+-.+|+.++
T Consensus 400 EeLvRciR--Fd~krIV----SGaYDGkikvWdl~aa 430 (499)
T KOG0281|consen 400 EELVRCIR--FDNKRIV----SGAYDGKIKVWDLQAA 430 (499)
T ss_pred HHhhhhee--ecCceee----eccccceEEEEecccc
Confidence 33333222 2344332 2222345555665544
No 386
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.78 E-value=0.053 Score=59.48 Aligned_cols=129 Identities=19% Similarity=0.176 Sum_probs=86.6
Q ss_pred eEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcCh-hHHHHHHhcCcEEEEEcccCCCCC----chhHH--hccccc
Q 004766 464 KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSV-SRTILMRHLGAVFCIANIRGGGEY----GEEWH--KGGALA 536 (732)
Q Consensus 464 ~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~-~~~~~l~~~G~~v~~~~~rG~g~~----g~~~~--~~~~~~ 536 (732)
.|...+..|.+. ++ -.+..+-||+.......-.. ....-++ +||+++.-|- |+.+. ...|. .....+
T Consensus 16 ~i~fev~LP~~W--Ng--R~~~~GgGG~~G~i~~~~~~~~~~~~~~-~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~d 89 (474)
T PF07519_consen 16 NIRFEVWLPDNW--NG--RFLQVGGGGFAGGINYADGKASMATALA-RGYATASTDS-GHQGSAGSDDASFGNNPEALLD 89 (474)
T ss_pred eEEEEEECChhh--cc--CeEEECCCeeeCcccccccccccchhhh-cCeEEEEecC-CCCCCcccccccccCCHHHHHH
Confidence 777777888754 23 35666666665433322210 1234466 9999999885 22221 11221 111233
Q ss_pred CCccHHHHHHHHHHHHHHcCC-CCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccc
Q 004766 537 KKQNCFDDFISASEYLISAGY-TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDM 598 (732)
Q Consensus 537 ~~~~~~~D~~~~~~~l~~~~~-~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~ 598 (732)
+....+.+...+.+.|++.-| ..|++-...|.|.||--.+.++.++|+.|.++|+.+|..++
T Consensus 90 fa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 90 FAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 444556777778888888755 36799999999999999999999999999999999997765
No 387
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=95.77 E-value=6.5 Score=47.21 Aligned_cols=119 Identities=9% Similarity=0.094 Sum_probs=67.3
Q ss_pred EEEeEEecCCcEEEEEEecCCcc-eEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCC
Q 004766 245 IFSGHVTEDGQYLVMCIEENCDP-VNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKD 323 (732)
Q Consensus 245 ~~~~~~SpDg~~l~~~~~~~~~~-~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~ 323 (732)
...++|-.||+|.++..-..... ...+.+++-++ . +.. ...-+.+... ...|.|.|..|+-... .
T Consensus 212 ~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG-~--L~s---------tSE~v~gLe~-~l~WrPsG~lIA~~q~-~ 277 (928)
T PF04762_consen 212 RVRISWRGDGEYFAVSSVEPETGSRRVIRVYSREG-E--LQS---------TSEPVDGLEG-ALSWRPSGNLIASSQR-L 277 (928)
T ss_pred ceEEEECCCCcEEEEEEEEcCCCceeEEEEECCCc-e--EEe---------ccccCCCccC-CccCCCCCCEEEEEEE-c
Confidence 35789999999999887633322 45677777664 1 100 0001112211 2259999987775543 3
Q ss_pred CCCceEEEEeCCCCC--CceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCC
Q 004766 324 APKYKIIRVDLKEPN--DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLK 381 (732)
Q Consensus 324 ~~~~~l~~~d~~~~~--~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~ 381 (732)
..+..|..+.-++-. .+..-. ...+..+..+.|..++.+++....+. |.+|...
T Consensus 278 ~~~~~VvFfErNGLrhgeF~l~~-~~~~~~v~~l~Wn~ds~iLAv~~~~~---vqLWt~~ 333 (928)
T PF04762_consen 278 PDRHDVVFFERNGLRHGEFTLRF-DPEEEKVIELAWNSDSEILAVWLEDR---VQLWTRS 333 (928)
T ss_pred CCCcEEEEEecCCcEeeeEecCC-CCCCceeeEEEECCCCCEEEEEecCC---ceEEEee
Confidence 345677777655433 122111 12246678899998766666666553 5666543
No 388
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.73 E-value=0.06 Score=57.07 Aligned_cols=118 Identities=16% Similarity=0.083 Sum_probs=79.7
Q ss_pred CCccEEEEEcCCCCccCCCCc--ChhHHHHHHhcCcEEEEEcccCCCCC---chhHHhcccccCCccHHHHHHHHHHHHH
Q 004766 479 GSHPCLLYGYGGFNISVTPSF--SVSRTILMRHLGAVFCIANIRGGGEY---GEEWHKGGALAKKQNCFDDFISASEYLI 553 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~--~~~~~~~l~~~G~~v~~~~~rG~g~~---g~~~~~~~~~~~~~~~~~D~~~~~~~l~ 553 (732)
...|+.|++-|-......|.- ...+..|..+.|..|+...+|=-|.. +.--....+...-...+.|+...|+.+-
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 456888888664322222211 22467888889999999999963321 1100111112222345788888888876
Q ss_pred Hc-CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 554 SA-GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 554 ~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
.+ +..++.+...+|+|+-|.|++|.=..+|++..++|+.++.+
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 55 56677799999999999999999999999988888766543
No 389
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=95.72 E-value=0.33 Score=53.77 Aligned_cols=198 Identities=10% Similarity=-0.032 Sum_probs=113.1
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccce-eeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWF-KFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
+..++..+.|++-.-.|+.+- +....|..||+....-......+. ....+.|||--...|++..+.
T Consensus 132 H~Rs~~~ldfh~tep~iliSG----SQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~ds--------- 198 (839)
T KOG0269|consen 132 HERSANKLDFHSTEPNILISG----SQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDS--------- 198 (839)
T ss_pred hccceeeeeeccCCccEEEec----CCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCC---------
Confidence 456788899999888888774 344689999998665332222221 236789999654444443332
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
..|.+||+-.+. ...+....+.+...-+.|+|++.||+-...+ ..+.+|+..+...
T Consensus 199 ---------G~lqlWDlRqp~---r~~~k~~AH~GpV~c~nwhPnr~~lATGGRD-----K~vkiWd~t~~~~------- 254 (839)
T KOG0269|consen 199 ---------GYLQLWDLRQPD---RCEKKLTAHNGPVLCLNWHPNREWLATGGRD-----KMVKIWDMTDSRA------- 254 (839)
T ss_pred ---------ceEEEeeccCch---hHHHHhhcccCceEEEeecCCCceeeecCCC-----ccEEEEeccCCCc-------
Confidence 247788886542 1222223344566778999999999865422 3356667665321
Q ss_pred cCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-CceEeccCCCCCceeEEEEecC-CEEEEE
Q 004766 289 RDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEAERDVLESATAVNL-NQMIVS 366 (732)
Q Consensus 289 ~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~~~~~~~-~~l~~~ 366 (732)
.+...+-......-..|.|+-...+-.+.- .....|.++|+..+= ....+..|. ..+.++.|..+ ..++..
T Consensus 255 ----~~~~tInTiapv~rVkWRP~~~~hLAtcsm-v~dtsV~VWDvrRPYIP~~t~~eH~--~~vt~i~W~~~d~~~l~s 327 (839)
T KOG0269|consen 255 ----KPKHTINTIAPVGRVKWRPARSYHLATCSM-VVDTSVHVWDVRRPYIPYATFLEHT--DSVTGIAWDSGDRINLWS 327 (839)
T ss_pred ----cceeEEeecceeeeeeeccCccchhhhhhc-cccceEEEEeeccccccceeeeccC--ccccceeccCCCceeeEe
Confidence 111111111111112477865533322222 235678999987653 233444444 56788888753 345666
Q ss_pred EecCC
Q 004766 367 YLSDV 371 (732)
Q Consensus 367 ~~~~g 371 (732)
...++
T Consensus 328 ~sKD~ 332 (839)
T KOG0269|consen 328 CSKDG 332 (839)
T ss_pred ecCcc
Confidence 66664
No 390
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=95.72 E-value=0.18 Score=53.46 Aligned_cols=54 Identities=11% Similarity=0.186 Sum_probs=33.1
Q ss_pred EEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceE--EEEEecCCeEEE
Q 004766 246 FSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY--EVIANDDTVFTF 318 (732)
Q Consensus 246 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~ 318 (732)
..+++||||++|+.++.++. |.+.+..+.+ +..+...+-... ..|||||+.|+.
T Consensus 294 n~f~FS~DG~~LA~VSqDGf-----LRvF~fdt~e--------------Llg~mkSYFGGLLCvcWSPDGKyIvt 349 (636)
T KOG2394|consen 294 NEFAFSPDGKYLATVSQDGF-----LRIFDFDTQE--------------LLGVMKSYFGGLLCVCWSPDGKYIVT 349 (636)
T ss_pred cceeEcCCCceEEEEecCce-----EEEeeccHHH--------------HHHHHHhhccceEEEEEcCCccEEEe
Confidence 36789999999999987654 5555544411 222222222222 259999987664
No 391
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=95.67 E-value=1 Score=48.36 Aligned_cols=95 Identities=14% Similarity=0.126 Sum_probs=54.0
Q ss_pred EEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC--CEEEEEEecCCeeEEEEEeCCCCcee
Q 004766 309 IANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL--NQMIVSYLSDVKYVLQIRDLKNGSLL 386 (732)
Q Consensus 309 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~--~~l~~~~~~~g~~~l~~~d~~~g~~~ 386 (732)
|+.||=++.+-+. .+.++.+|+.+..+ -.+-.+.....|..+.|.+. ...+++... ..+.+||..+|+..
T Consensus 236 F~d~gL~~aVGts----~G~v~iyDLRa~~p-l~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk---~~~kiWd~~~Gk~~ 307 (703)
T KOG2321|consen 236 FRDDGLHVAVGTS----TGSVLIYDLRASKP-LLVKDHGYELPIKKLDWQDTDQQNKVVSMDK---RILKIWDECTGKPM 307 (703)
T ss_pred ecCCceeEEeecc----CCcEEEEEcccCCc-eeecccCCccceeeecccccCCCceEEecch---HHhhhcccccCCce
Confidence 5555656665333 45799999988762 22223443455666666542 334444433 35788998889875
Q ss_pred eecccccceeeEeecccCCcEEEEEE
Q 004766 387 HQLPIEIGSVNAISARREDSVVFISF 412 (732)
Q Consensus 387 ~~l~~~~g~v~~~~~s~d~~~l~~~~ 412 (732)
..+. |...+..+..-+++..+++..
T Consensus 308 asiE-pt~~lND~C~~p~sGm~f~An 332 (703)
T KOG2321|consen 308 ASIE-PTSDLNDFCFVPGSGMFFTAN 332 (703)
T ss_pred eecc-ccCCcCceeeecCCceEEEec
Confidence 5554 222344455556666554443
No 392
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=95.67 E-value=0.11 Score=52.62 Aligned_cols=127 Identities=16% Similarity=0.108 Sum_probs=77.2
Q ss_pred CCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce---ecccccceeeeeEEEEeCCcEEEEEEec
Q 004766 122 DPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV---EADALSWFKFSSIAWTHDSKGFFYSRYP 198 (732)
Q Consensus 122 D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~---~~~~~~~~~~~~~~WspDg~~l~y~~~~ 198 (732)
|.+-++ ++..++..++|||..+-+.++.+.+| .|+|||+..+.. +.....+.++.-++|+-+-..|++..++
T Consensus 249 d~~Pf~-gH~~SVEDLqWSptE~~vfaScS~Dg----sIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~Dd 323 (440)
T KOG0302|consen 249 DQRPFT-GHTKSVEDLQWSPTEDGVFASCSCDG----SIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDD 323 (440)
T ss_pred cCcccc-ccccchhhhccCCccCceEEeeecCc----eEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCC
Confidence 444443 35678889999999999988887665 699999998842 2112223345778999777645543222
Q ss_pred CCCCCCCCCCCCcccCCcccEEEEEECCCCCCC-CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCC
Q 004766 199 APKEGKDMDAGTETDSNLYHEFYYHFLGTKQSE-DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS 277 (732)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~-~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 277 (732)
+ .+.+|+|.+-+.. .+..|. .+..-+.++.|+|....++..+.. .++|.++|++
T Consensus 324 G-------------------t~~iwDLR~~~~~~pVA~fk--~Hk~pItsieW~p~e~s~iaasg~----D~QitiWDls 378 (440)
T KOG0302|consen 324 G-------------------TLSIWDLRQFKSGQPVATFK--YHKAPITSIEWHPHEDSVIAASGE----DNQITIWDLS 378 (440)
T ss_pred c-------------------eEEEEEhhhccCCCcceeEE--eccCCeeEEEeccccCceEEeccC----CCcEEEEEee
Confidence 2 3555555432222 122232 223346789999987776555432 2456677765
Q ss_pred C
Q 004766 278 A 278 (732)
Q Consensus 278 ~ 278 (732)
.
T Consensus 379 v 379 (440)
T KOG0302|consen 379 V 379 (440)
T ss_pred c
Confidence 4
No 393
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.61 E-value=0.019 Score=48.57 Aligned_cols=59 Identities=19% Similarity=0.072 Sum_probs=44.6
Q ss_pred CCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 649 YPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 649 ~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
.+|+|++.+..|+.+|+..+.++.++|.. ..+++..+.||+.....+. -....+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~--------------s~lvt~~g~gHg~~~~~s~--C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG--------------SRLVTVDGAGHGVYAGGSP--CVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC--------------ceEEEEeccCcceecCCCh--HHHHHHHHHHH
Confidence 58999999999999999999999988763 3778888999997632222 22334556765
No 394
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=95.59 E-value=0.054 Score=53.50 Aligned_cols=96 Identities=15% Similarity=0.099 Sum_probs=57.3
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCc--EEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGA--VFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG 556 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~--~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 556 (732)
....++||+||.-.. ...... ...++....|+ .++.+..+..|..- .|..+ +..-..+-.++...++.|.+.
T Consensus 16 ~~~~vlvfVHGyn~~-f~~a~~-r~aql~~~~~~~~~~i~FsWPS~g~~~-~Y~~d--~~~a~~s~~~l~~~L~~L~~~- 89 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNS-FEDALR-RAAQLAHDLGFPGVVILFSWPSDGSLL-GYFYD--RESARFSGPALARFLRDLARA- 89 (233)
T ss_pred CCCeEEEEEeCCCCC-HHHHHH-HHHHHHHHhCCCceEEEEEcCCCCChh-hhhhh--hhhHHHHHHHHHHHHHHHHhc-
Confidence 466799999995332 111110 12233333333 78888888766522 22222 112223445666666667665
Q ss_pred CCCCCcEEEEecChhHHHHHHHHhh
Q 004766 557 YTQSRKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 557 ~~d~~~i~i~G~S~GG~l~~~~~~~ 581 (732)
....+|-|++||||+.+++.++.+
T Consensus 90 -~~~~~I~ilaHSMG~rv~~~aL~~ 113 (233)
T PF05990_consen 90 -PGIKRIHILAHSMGNRVLLEALRQ 113 (233)
T ss_pred -cCCceEEEEEeCchHHHHHHHHHH
Confidence 345799999999999999988765
No 395
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.59 E-value=0.12 Score=48.09 Aligned_cols=109 Identities=13% Similarity=0.114 Sum_probs=63.4
Q ss_pred EEEEcCCCCCCCCccEEEEEcCCCCccCCCCcC---------------hhHHHHHHhcCcEEEEEcccCCCCCchhHHhc
Q 004766 468 FIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFS---------------VSRTILMRHLGAVFCIANIRGGGEYGEEWHKG 532 (732)
Q Consensus 468 ~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~---------------~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~ 532 (732)
+|+..++. ...+.-++|++||+.-.... .|. +-+.+..+ .||-|++.|.- ..+.+++.
T Consensus 89 FiF~s~~~-lt~~~kLlVLIHGSGvVrAG-QWARrLIIN~~Ld~GTQiPyi~rAv~-~Gygviv~N~N----~~~kfye~ 161 (297)
T KOG3967|consen 89 FIFMSEDA-LTNPQKLLVLIHGSGVVRAG-QWARRLIINEDLDSGTQIPYIKRAVA-EGYGVIVLNPN----RERKFYEK 161 (297)
T ss_pred eEEEChhH-hcCccceEEEEecCceEecc-hHhhhhhhccccccCCcChHHHHHHH-cCCcEEEeCCc----hhhhhhhc
Confidence 34444443 23556699999997433211 111 11234445 89999998864 22334433
Q ss_pred ccccCC--ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCe
Q 004766 533 GALAKK--QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL 585 (732)
Q Consensus 533 ~~~~~~--~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~ 585 (732)
-....+ ....+-+.-+-.+++.. ..+..++++-||+||++++-++.+.|+.
T Consensus 162 k~np~kyirt~veh~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~d 214 (297)
T KOG3967|consen 162 KRNPQKYIRTPVEHAKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPDD 214 (297)
T ss_pred ccCcchhccchHHHHHHHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcCCc
Confidence 111111 12244444444444433 4567899999999999999999998873
No 396
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=95.55 E-value=0.95 Score=47.35 Aligned_cols=174 Identities=15% Similarity=0.110 Sum_probs=97.1
Q ss_pred EEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEe
Q 004766 219 EFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKL 298 (732)
Q Consensus 219 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l 298 (732)
.|.+|.+....... ...--|+....+.-+|+|.+|+...- ...||+|.+.+|. + +..+
T Consensus 62 ~l~vw~i~k~~~~~----q~~v~Pg~v~al~s~n~G~~l~ag~i-----~g~lYlWelssG~--L-----------L~v~ 119 (476)
T KOG0646|consen 62 LLHVWEILKKDQVV----QYIVLPGPVHALASSNLGYFLLAGTI-----SGNLYLWELSSGI--L-----------LNVL 119 (476)
T ss_pred cccccccCchhhhh----hhcccccceeeeecCCCceEEEeecc-----cCcEEEEEecccc--H-----------HHHH
Confidence 57777776433221 11112334456788999999976532 2459999999863 1 1122
Q ss_pred eecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCC---CC------CCceEeccCCCCCceeEEEEecC--CEEEEE
Q 004766 299 IDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLK---EP------NDWFEVIPEAERDVLESATAVNL--NQMIVS 366 (732)
Q Consensus 299 ~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~---~~------~~~~~l~~~~~~~~l~~~~~~~~--~~l~~~ 366 (732)
...+..... .|+.||.+|+-.+++ +.+..+.+. .. +....+-.| ...+.++.+..+ +..+++
T Consensus 120 ~aHYQ~ITcL~fs~dgs~iiTgskD----g~V~vW~l~~lv~a~~~~~~~p~~~f~~H--tlsITDl~ig~Gg~~~rl~T 193 (476)
T KOG0646|consen 120 SAHYQSITCLKFSDDGSHIITGSKD----GAVLVWLLTDLVSADNDHSVKPLHIFSDH--TLSITDLQIGSGGTNARLYT 193 (476)
T ss_pred HhhccceeEEEEeCCCcEEEecCCC----ccEEEEEEEeecccccCCCccceeeeccC--cceeEEEEecCCCccceEEE
Confidence 223433332 477777766543332 234444321 11 111111122 255777777653 345666
Q ss_pred EecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 367 YLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 367 ~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
...| ..+.+||+..|..+..+.+| ..+..+..+|.+..+|+.. .-+.+|..++-
T Consensus 194 aS~D--~t~k~wdlS~g~LLlti~fp-~si~av~lDpae~~~yiGt----~~G~I~~~~~~ 247 (476)
T KOG0646|consen 194 ASED--RTIKLWDLSLGVLLLTITFP-SSIKAVALDPAERVVYIGT----EEGKIFQNLLF 247 (476)
T ss_pred ecCC--ceEEEEEeccceeeEEEecC-CcceeEEEcccccEEEecC----CcceEEeeehh
Confidence 6666 57889999988887777776 3455667777776665542 23566666553
No 397
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.54 E-value=0.58 Score=45.60 Aligned_cols=102 Identities=12% Similarity=0.032 Sum_probs=64.3
Q ss_pred EEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChh-HHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHH
Q 004766 467 MFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVS-RTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDF 545 (732)
Q Consensus 467 ~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~-~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~ 545 (732)
.|+..|+. +. .||++-||--....|..... ++..|+++||+|++.-|.-+-. |... .....+.|
T Consensus 8 ~wvl~P~~-----P~-gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfD-----H~~~----A~~~~~~f 72 (250)
T PF07082_consen 8 SWVLIPPR-----PK-GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFD-----HQAI----AREVWERF 72 (250)
T ss_pred cEEEeCCC-----CC-EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCc-----HHHH----HHHHHHHH
Confidence 45566642 22 67777787444445543322 3555666999999988864322 1111 12335667
Q ss_pred HHHHHHHHHcCCCCCC--cEEEEecChhHHHHHHHHhhCC
Q 004766 546 ISASEYLISAGYTQSR--KLCIEGGSNGGLLVGACINQRP 583 (732)
Q Consensus 546 ~~~~~~l~~~~~~d~~--~i~i~G~S~GG~l~~~~~~~~p 583 (732)
..|++.|.+++..++. .+.-+|||+|..+-+.+...++
T Consensus 73 ~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~ 112 (250)
T PF07082_consen 73 ERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFD 112 (250)
T ss_pred HHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhcc
Confidence 7888888877544443 5777999999999888776643
No 398
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=95.48 E-value=4.6 Score=46.42 Aligned_cols=245 Identities=14% Similarity=0.110 Sum_probs=122.6
Q ss_pred EeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEe-----cc---------
Q 004766 88 KRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALS-----YS--------- 153 (732)
Q Consensus 88 ~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~-----~~--------- 153 (732)
++|..+++..+++.. ...+|..... + .+.. ....+..+.|||+|+++++... ..
T Consensus 69 pdg~~~~~~~~~~~~-~~~l~l~~~~-g----~~~~------~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 136 (620)
T COG1506 69 PDGSVLAFVSTDGGR-VAQLYLVDVG-G----LITK------TAFGVSDARWSPDGDRIAFLTAEGASKRDGGDHLFVDR 136 (620)
T ss_pred CCCCEEEEEeccCCC-cceEEEEecC-C----ceee------eecccccceeCCCCCeEEEEecccccccCCceeeeecc
Confidence 355556666544433 3446665432 2 1111 1233557889999999998311 11
Q ss_pred --------CCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEEC
Q 004766 154 --------GSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFL 225 (732)
Q Consensus 154 --------G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l 225 (732)
|.+...++++|.++ ...........+..++|.+|++.++........ ...-...+.+..
T Consensus 137 ~~~~~~~~g~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~ 203 (620)
T COG1506 137 LPVWFDGRGGERSDLYVVDIES-KLIKLGLGNLDVVSFATDGDGRLVASIRLDDDA------------DPWVTNLYVLIE 203 (620)
T ss_pred cceeecCCCCcccceEEEccCc-ccccccCCCCceeeeeeCCCCceeEEeeecccc------------CCceEeeEEEec
Confidence 22456677777765 222222233334566777667777776644310 011122233322
Q ss_pred CCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCC---cceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc
Q 004766 226 GTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENC---DPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF 302 (732)
Q Consensus 226 gt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~---~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~ 302 (732)
+++. +... .+ .......+.+.+||+.+++...... .....+++.+.+.+. ........
T Consensus 204 ~~~~---~~~~-~~-~~~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~d~~~~~~ 264 (620)
T COG1506 204 GNGE---LESL-TP-GEGSISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGELGE--------------VDGDLSSG 264 (620)
T ss_pred CCCc---eEEE-cC-CCceeeeeeeCCCCCeeEEeccCCccCccccceEEEEeccccc--------------cceeeccC
Confidence 2221 1121 11 2234567889999998887765443 123456666622221 00101111
Q ss_pred c--ceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC-eeEEEE
Q 004766 303 D--AQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV-KYVLQI 377 (732)
Q Consensus 303 ~--~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g-~~~l~~ 377 (732)
+ ... ....-++..++|++........++..+..+.. ..+.. .+...+..+.+ .++.+++...... .+++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~--~~~~~-~~~~~v~~f~~-~~~~~~~~~s~~~~p~~i~~ 340 (620)
T COG1506 265 DDTRGAWAVEGGLDGDGLLFIATDGGGSSPLFRVDDLGGG--VEGLS-GDDGGVPGFDV-DGRKLALAYSSPTEPPEIYL 340 (620)
T ss_pred CcccCcHHhccccCCCcEEEEEecCCCceEEEEEeccCCc--eeeec-CCCceEEEEee-CCCEEEEEecCCCCccceEE
Confidence 0 000 01123567777777764445566666544433 22222 22356777776 3367777666554 568999
Q ss_pred EeC
Q 004766 378 RDL 380 (732)
Q Consensus 378 ~d~ 380 (732)
++.
T Consensus 341 ~~~ 343 (620)
T COG1506 341 YDR 343 (620)
T ss_pred EcC
Confidence 886
No 399
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=95.43 E-value=0.05 Score=36.53 Aligned_cols=30 Identities=20% Similarity=0.160 Sum_probs=21.4
Q ss_pred eEEEeEEecCCcEEEEEEecCCcceEEEEE
Q 004766 244 YIFSGHVTEDGQYLVMCIEENCDPVNKVYY 273 (732)
Q Consensus 244 ~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~ 273 (732)
....+.|||||++|+|++........+||+
T Consensus 10 ~~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 10 DDGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp SEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred cccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 456899999999999999876222566774
No 400
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=95.43 E-value=0.21 Score=49.67 Aligned_cols=87 Identities=15% Similarity=0.146 Sum_probs=58.8
Q ss_pred EEeCCCC--cCCC---CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc----cceeeeeEEEEeCC
Q 004766 119 VLLDPNT--LSDD---GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL----SWFKFSSIAWTHDS 189 (732)
Q Consensus 119 ~l~D~~~--l~~~---~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~----~~~~~~~~~WspDg 189 (732)
.++|+.. +.+. +..++..+++.|+.-.|..+. ++...|++|+++++..+.... .....-++.|++||
T Consensus 118 rVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~----SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~g 193 (385)
T KOG1034|consen 118 RVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSA----SKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDG 193 (385)
T ss_pred EEEecchhhhccceeccCccchhhhcCCCCCcEEEEe----cCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCC
Confidence 4567743 2221 346788999999987777665 344689999999987543211 11124678999999
Q ss_pred cEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCC
Q 004766 190 KGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK 228 (732)
Q Consensus 190 ~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~ 228 (732)
++|+-. +..+.|.+|++..+
T Consensus 194 d~i~Sc-------------------GmDhslk~W~l~~~ 213 (385)
T KOG1034|consen 194 DRIASC-------------------GMDHSLKLWRLNVK 213 (385)
T ss_pred Ceeecc-------------------CCcceEEEEecChh
Confidence 977754 45567888888754
No 401
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=95.38 E-value=1.6 Score=48.99 Aligned_cols=93 Identities=15% Similarity=0.163 Sum_probs=66.4
Q ss_pred CCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccC
Q 004766 325 PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARRE 404 (732)
Q Consensus 325 ~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d 404 (732)
..+.|..+|..+..-.+.+..+. ..|.++.+++|++.+++..-| +.|++||+.+|..+--+-++. .+.+++++|.
T Consensus 554 ddf~I~vvD~~t~kvvR~f~gh~--nritd~~FS~DgrWlisasmD--~tIr~wDlpt~~lID~~~vd~-~~~sls~SPn 628 (910)
T KOG1539|consen 554 DDFSIRVVDVVTRKVVREFWGHG--NRITDMTFSPDGRWLISASMD--STIRTWDLPTGTLIDGLLVDS-PCTSLSFSPN 628 (910)
T ss_pred CceeEEEEEchhhhhhHHhhccc--cceeeeEeCCCCcEEEEeecC--CcEEEEeccCcceeeeEecCC-cceeeEECCC
Confidence 35789999988776445555665 578999999988877777777 579999999888755444442 2346788999
Q ss_pred CcEEEEEEecCCCCceEEEEE
Q 004766 405 DSVVFISFTSFLIPGIVYQCN 425 (732)
Q Consensus 405 ~~~l~~~~ss~~~p~~~y~~d 425 (732)
|+.|+-+...- ..+|.|.
T Consensus 629 gD~LAT~Hvd~---~gIylWs 646 (910)
T KOG1539|consen 629 GDFLATVHVDQ---NGIYLWS 646 (910)
T ss_pred CCEEEEEEecC---ceEEEEE
Confidence 99776554442 3566664
No 402
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=95.36 E-value=2.2 Score=45.55 Aligned_cols=112 Identities=14% Similarity=0.150 Sum_probs=64.2
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+..-+|||||.-|.-+ .|...|.+|.-. |-... ..........++|.|++..++|+..+
T Consensus 105 ~A~~~gRW~~dGtgLlt~-----GEDG~iKiWSrs-GMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~------------ 166 (737)
T KOG1524|consen 105 AAISSGRWSPDGAGLLTA-----GEDGVIKIWSRS-GMLRSTVVQNEESIRCARWAPNSNSIVFCQGG------------ 166 (737)
T ss_pred hhhhhcccCCCCceeeee-----cCCceEEEEecc-chHHHHHhhcCceeEEEEECCCCCceEEecCC------------
Confidence 345667899999876533 244689999853 42111 11111234789999999999998522
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
.++.-.+.-. ..++-+. .+++.+..+.|++....|+-. +. ..+.-++|..+
T Consensus 167 --------h~~IKpL~~n--~k~i~Wk--AHDGiiL~~~W~~~s~lI~sg---GE--D~kfKvWD~~G 217 (737)
T KOG1524|consen 167 --------HISIKPLAAN--SKIIRWR--AHDGLVLSLSWSTQSNIIASG---GE--DFRFKIWDAQG 217 (737)
T ss_pred --------eEEEeecccc--cceeEEe--ccCcEEEEeecCccccceeec---CC--ceeEEeecccC
Confidence 2343333221 1122232 234567788999988876532 22 23344556554
No 403
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.34 E-value=0.066 Score=52.85 Aligned_cols=85 Identities=14% Similarity=0.055 Sum_probs=52.8
Q ss_pred cEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHH-HHHHHHcCCCCC
Q 004766 482 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISA-SEYLISAGYTQS 560 (732)
Q Consensus 482 P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~ 560 (732)
+.|+.+|++.|+. ..|. .+...|...++.|..+..+|-+. ......+++++++. ++.+.+... .
T Consensus 1 ~~lf~~p~~gG~~--~~y~-~la~~l~~~~~~v~~i~~~~~~~----------~~~~~~si~~la~~y~~~I~~~~~--~ 65 (229)
T PF00975_consen 1 RPLFCFPPAGGSA--SSYR-PLARALPDDVIGVYGIEYPGRGD----------DEPPPDSIEELASRYAEAIRARQP--E 65 (229)
T ss_dssp -EEEEESSTTCSG--GGGH-HHHHHHTTTEEEEEEECSTTSCT----------TSHEESSHHHHHHHHHHHHHHHTS--S
T ss_pred CeEEEEcCCccCH--HHHH-HHHHhCCCCeEEEEEEecCCCCC----------CCCCCCCHHHHHHHHHHHhhhhCC--C
Confidence 3578889988753 3454 35566662258888999888541 11122344555443 333333221 1
Q ss_pred CcEEEEecChhHHHHHHHHhh
Q 004766 561 RKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~ 581 (732)
+.+.++|+|+||.++..++.+
T Consensus 66 gp~~L~G~S~Gg~lA~E~A~~ 86 (229)
T PF00975_consen 66 GPYVLAGWSFGGILAFEMARQ 86 (229)
T ss_dssp SSEEEEEETHHHHHHHHHHHH
T ss_pred CCeeehccCccHHHHHHHHHH
Confidence 389999999999999988774
No 404
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=95.32 E-value=3.2 Score=40.86 Aligned_cols=104 Identities=22% Similarity=0.308 Sum_probs=56.0
Q ss_pred cCCeEEEEeCCCCCCceEEEEeCCCCCC-ceEeccCCC-CCce-------eEEEEecCCEEEEEEecCCeeEEEEEeCCC
Q 004766 312 DDTVFTFLTNKDAPKYKIIRVDLKEPND-WFEVIPEAE-RDVL-------ESATAVNLNQMIVSYLSDVKYVLQIRDLKN 382 (732)
Q Consensus 312 dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~l~~~~~-~~~l-------~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~ 382 (732)
+++.+++... ...|+.+|+++++. |..-+.... ...+ ..+.+.. +.+++. ..++. +..+|+.+
T Consensus 121 ~~~~~~~~~~----~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~-~~~g~--~~~~d~~t 192 (238)
T PF13360_consen 121 DGDRLYVGTS----SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISD-GRVYVS-SGDGR--VVAVDLAT 192 (238)
T ss_dssp ETTEEEEEET----CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCT-TEEEEE-CCTSS--EEEEETTT
T ss_pred ecCEEEEEec----cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEEC-CEEEEE-cCCCe--EEEEECCC
Confidence 4777877654 45799999998862 333332211 1111 2223333 555554 44432 55559988
Q ss_pred CceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 383 GSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 383 g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
|+.+-... ...+.. ....+++.+++.. . ...++.+|+.+|+
T Consensus 193 g~~~w~~~--~~~~~~-~~~~~~~~l~~~~-~---~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 193 GEKLWSKP--ISGIYS-LPSVDGGTLYVTS-S---DGRLYALDLKTGK 233 (238)
T ss_dssp TEEEEEEC--SS-ECE-CEECCCTEEEEEE-T---TTEEEEEETTTTE
T ss_pred CCEEEEec--CCCccC-CceeeCCEEEEEe-C---CCEEEEEECCCCC
Confidence 87532222 222222 1234566666554 2 4789999999994
No 405
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=95.28 E-value=0.14 Score=56.01 Aligned_cols=133 Identities=15% Similarity=0.203 Sum_probs=77.9
Q ss_pred CCceEEeCCCCcCCC-----CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-eeeeeEEEEeC
Q 004766 115 AKAKVLLDPNTLSDD-----GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW-FKFSSIAWTHD 188 (732)
Q Consensus 115 ~~~~~l~D~~~l~~~-----~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~-~~~~~~~WspD 188 (732)
|-.-||+|++.-+.. ....+..++|||+|+++|-.. .| ....++||+++.-..+.+..+. ......+|||.
T Consensus 57 GCvVVlfn~~~~tQ~hlvnssRk~~t~vAfS~~GryvatGE--cG-~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp~ 133 (1080)
T KOG1408|consen 57 GCVVVLFNVDSCTQSHLVNSSRKPLTCVAFSQNGRYVATGE--CG-RTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSPG 133 (1080)
T ss_pred CcEEEEEcccccchhheecccCcceeEEEEcCCCcEEEecc--cC-CCccceeeeeccccchhhhhhccccceeeeecCC
Confidence 444667776543322 123578999999999998553 22 2357999999876644433221 12478999999
Q ss_pred CcEEEEEEecCCCCCCCCCCCCcccCCccc--EEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCc
Q 004766 189 SKGFFYSRYPAPKEGKDMDAGTETDSNLYH--EFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCD 266 (732)
Q Consensus 189 g~~l~y~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 266 (732)
+++|.-+.. +... .+|-|+.....+... -...+..+++|.||.|.+-..++
T Consensus 134 ~kyvvSVGs-----------------QHDMIVnv~dWr~N~~~asnk-------iss~Vsav~fsEdgSYfvT~gnr--- 186 (1080)
T KOG1408|consen 134 NKYVVSVGS-----------------QHDMIVNVNDWRVNSSGASNK-------ISSVVSAVAFSEDGSYFVTSGNR--- 186 (1080)
T ss_pred CcEEEeecc-----------------ccceEEEhhhhhhcccccccc-------cceeEEEEEEccCCceeeeeeee---
Confidence 998875532 1112 233334332222111 12234578899999998766544
Q ss_pred ceEEEEEEeCCC
Q 004766 267 PVNKVYYCDLSA 278 (732)
Q Consensus 267 ~~~~l~~~d~~~ 278 (732)
.-.+|.++...
T Consensus 187 -Hvk~wyl~~~~ 197 (1080)
T KOG1408|consen 187 -HVKLWYLQIQS 197 (1080)
T ss_pred -eEEEEEeeccc
Confidence 34566666543
No 406
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=95.26 E-value=3.4 Score=40.78 Aligned_cols=257 Identities=15% Similarity=0.089 Sum_probs=128.7
Q ss_pred EEEeEEEC--CCC-cEEEEEEecc-CCceEEEEEEECCCCceecccc--cceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 133 ALIKVSVS--EDA-KYLAYALSYS-GSDWATIKLMRIEDQIVEADAL--SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 133 ~~~~~~~S--PDG-~~la~~~~~~-G~e~~~i~v~dl~~g~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
.+.+..|| ||- -+||..+-.. -....+|.-.|.++|+.+.... ......-+.|.||.+.++= ..
T Consensus 46 ~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~p-dl--------- 115 (364)
T KOG0290|consen 46 PLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYP-DL--------- 115 (364)
T ss_pred ceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCc-ch---------
Confidence 34445555 333 3466654222 2223455556667787654331 1111356899999875542 00
Q ss_pred CCCCcccCCcccEEEEEECCCCCC--CCeEEEecCCCC---eeEEEeEEec-CCcEEEEEEecCCcceEEEEEEeCCCCC
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQS--EDILCWKDPEHP---KYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALP 280 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~--~~~~v~~~~~~~---~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~ 280 (732)
+ ......+.+|+++.... +-..+.....+. .-..++.|.. |-++|..++-+ + + .-++|++++.
T Consensus 116 ----L--ATs~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiD-T--T--CTiWdie~~~ 184 (364)
T KOG0290|consen 116 ----L--ATSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSID-T--T--CTIWDIETGV 184 (364)
T ss_pred ----h--hcccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeeccc-C--e--EEEEEEeecc
Confidence 0 11223467777774322 111122111111 1234566655 44555433322 2 2 3455766642
Q ss_pred CCcccccccCCCCCcEEeeecccceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCC--CCceeEEEE
Q 004766 281 EGLEGFKKRDGLLPFVKLIDGFDAQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE--RDVLESATA 357 (732)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~--~~~l~~~~~ 357 (732)
.+ .-..+|+......+. .|+..|..++..... .+.+-.+|+...+. .+++-+.+ ...+.-++|
T Consensus 185 ~~----------~vkTQLIAHDKEV~DIaf~~~s~~~FASvga---DGSvRmFDLR~leH-STIIYE~p~~~~pLlRLsw 250 (364)
T KOG0290|consen 185 SG----------TVKTQLIAHDKEVYDIAFLKGSRDVFASVGA---DGSVRMFDLRSLEH-STIIYEDPSPSTPLLRLSW 250 (364)
T ss_pred cc----------ceeeEEEecCcceeEEEeccCccceEEEecC---CCcEEEEEeccccc-ceEEecCCCCCCcceeecc
Confidence 11 112355554333333 366655554433332 45688889887653 34443332 355666777
Q ss_pred ecCCE-EEEEEecCCeeEEEEEeCCC-CceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 358 VNLNQ-MIVSYLSDVKYVLQIRDLKN-GSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 358 ~~~~~-l~~~~~~~g~~~l~~~d~~~-g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
.+.+- +.++...+ ..+|.++|+.. +..+.+|..+.+.|.++.+.|.+..-.++.... .+...+|+..
T Consensus 251 nkqDpnymATf~~d-S~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD---~qaliWDl~q 319 (364)
T KOG0290|consen 251 NKQDPNYMATFAMD-SNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDD---CQALIWDLQQ 319 (364)
T ss_pred CcCCchHHhhhhcC-CceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCc---ceEEEEeccc
Confidence 76332 33333333 35788888753 233345555678888899888776665555443 3455667653
No 407
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=95.19 E-value=3.2 Score=40.93 Aligned_cols=187 Identities=17% Similarity=0.089 Sum_probs=91.0
Q ss_pred ECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcc
Q 004766 139 VSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLY 217 (732)
Q Consensus 139 ~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~ 217 (732)
..+++++|... + ++ ..|+.+|+.+|+.+-. .........+ ..++..|++... .
T Consensus 32 ~~~~~~~v~~~-~--~~--~~l~~~d~~tG~~~W~~~~~~~~~~~~--~~~~~~v~v~~~-------------------~ 85 (238)
T PF13360_consen 32 AVPDGGRVYVA-S--GD--GNLYALDAKTGKVLWRFDLPGPISGAP--VVDGGRVYVGTS-------------------D 85 (238)
T ss_dssp EEEETTEEEEE-E--TT--SEEEEEETTTSEEEEEEECSSCGGSGE--EEETTEEEEEET-------------------T
T ss_pred EEEeCCEEEEE-c--CC--CEEEEEECCCCCEEEEeecccccccee--eecccccccccc-------------------e
Confidence 34456655544 2 22 4899999999985421 1111101222 335556666541 1
Q ss_pred cEEEEEECCCCCCCCeEEEec---C-CCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCC
Q 004766 218 HEFYYHFLGTKQSEDILCWKD---P-EHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 293 (732)
Q Consensus 218 ~~v~~~~lgt~~~~~~~v~~~---~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 293 (732)
..|+.++..++. ++++. . +............+|..+++... ...|+.+|+.+|...
T Consensus 86 ~~l~~~d~~tG~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~l~~~d~~tG~~~----------- 145 (238)
T PF13360_consen 86 GSLYALDAKTGK----VLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTS-----SGKLVALDPKTGKLL----------- 145 (238)
T ss_dssp SEEEEEETTTSC----EEEEEEE-SSCTCSTB--SEEEEETTEEEEEET-----CSEEEEEETTTTEEE-----------
T ss_pred eeeEecccCCcc----eeeeeccccccccccccccCceEecCEEEEEec-----cCcEEEEecCCCcEE-----------
Confidence 267888876664 23331 1 11112223334445777766543 245788887775311
Q ss_pred CcEEeeeccc----------ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-CceEeccCCCCCceeEEEEecCCE
Q 004766 294 PFVKLIDGFD----------AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEAERDVLESATAVNLNQ 362 (732)
Q Consensus 294 ~~~~l~~~~~----------~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~~~~~~~~~ 362 (732)
|..-..... ........ ++.+|+.+..+ .++.+|+++++ .|+.. . ..+.......++.
T Consensus 146 -w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~g----~~~~~d~~tg~~~w~~~-~----~~~~~~~~~~~~~ 214 (238)
T PF13360_consen 146 -WKYPVGEPRGSSPISSFSDINGSPVIS-DGRVYVSSGDG----RVVAVDLATGEKLWSKP-I----SGIYSLPSVDGGT 214 (238)
T ss_dssp -EEEESSTT-SS--EEEETTEEEEEECC-TTEEEEECCTS----SEEEEETTTTEEEEEEC-S----S-ECECEECCCTE
T ss_pred -EEeecCCCCCCcceeeecccccceEEE-CCEEEEEcCCC----eEEEEECCCCCEEEEec-C----CCccCCceeeCCE
Confidence 111111100 00112222 34666554432 37777998876 23211 1 1233312233367
Q ss_pred EEEEEecCCeeEEEEEeCCCCce
Q 004766 363 MIVSYLSDVKYVLQIRDLKNGSL 385 (732)
Q Consensus 363 l~~~~~~~g~~~l~~~d~~~g~~ 385 (732)
+++.. .+ .+|+.+|+.+|+.
T Consensus 215 l~~~~-~~--~~l~~~d~~tG~~ 234 (238)
T PF13360_consen 215 LYVTS-SD--GRLYALDLKTGKV 234 (238)
T ss_dssp EEEEE-TT--TEEEEEETTTTEE
T ss_pred EEEEe-CC--CEEEEEECCCCCE
Confidence 77666 44 5899999999875
No 408
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=95.17 E-value=5.6 Score=42.67 Aligned_cols=246 Identities=13% Similarity=0.046 Sum_probs=133.9
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
......|+|..+...... +. .+.+.+........ .........+.+.+++++.+|....+
T Consensus 34 ~~v~~~~~g~~~~v~~~~--~~--~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~--------------- 94 (381)
T COG3391 34 GGVAVNPDGTQVYVANSG--SN--DVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGD--------------- 94 (381)
T ss_pred ceeEEcCccCEEEEEeec--Cc--eeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCC---------------
Confidence 367788999777666422 21 56666655222211 11111122567788888877766422
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 293 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 293 (732)
...|...+..+... +....-.. .-..++++|||+.+++..... ..+.+.++|..+..
T Consensus 95 ---~~~v~vid~~~~~~----~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~--~~~~vsvid~~t~~------------- 151 (381)
T COG3391 95 ---SNTVSVIDTATNTV----LGSIPVGL-GPVGLAVDPDGKYVYVANAGN--GNNTVSVIDAATNK------------- 151 (381)
T ss_pred ---CCeEEEEcCcccce----eeEeeecc-CCceEEECCCCCEEEEEeccc--CCceEEEEeCCCCe-------------
Confidence 23456656443321 11111100 224789999999997765432 24678888877632
Q ss_pred CcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCce-E---eccCCCCCceeEEEEecC-CEEEEEEe
Q 004766 294 PFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWF-E---VIPEAERDVLESATAVNL-NQMIVSYL 368 (732)
Q Consensus 294 ~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~-~---l~~~~~~~~l~~~~~~~~-~~l~~~~~ 368 (732)
.......+....-..++|+|..+|... .....|..+|.++...++ . .++.. ..-..+.+.++ .++|+...
T Consensus 152 ~~~~~~vG~~P~~~a~~p~g~~vyv~~---~~~~~v~vi~~~~~~v~~~~~~~~~~~~--~~P~~i~v~~~g~~~yV~~~ 226 (381)
T COG3391 152 VTATIPVGNTPTGVAVDPDGNKVYVTN---SDDNTVSVIDTSGNSVVRGSVGSLVGVG--TGPAGIAVDPDGNRVYVAND 226 (381)
T ss_pred EEEEEecCCCcceEEECCCCCeEEEEe---cCCCeEEEEeCCCcceeccccccccccC--CCCceEEECCCCCEEEEEec
Confidence 111222222222235889999888654 234578888866554111 0 11111 11234556654 45776665
Q ss_pred cCCeeEEEEEeCCCCceeee-cccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQ-LPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~-l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.+....+.++|..++..... +....+....+..+|+++.+++.... ...++..|..+..
T Consensus 227 ~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~---~~~V~vid~~~~~ 286 (381)
T COG3391 227 GSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQ---GGTVSVIDGATDR 286 (381)
T ss_pred cCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecC---CCeEEEEeCCCCc
Confidence 55445788889887665322 22222123355678999877665444 6789999987653
No 409
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=95.13 E-value=4 Score=40.82 Aligned_cols=191 Identities=12% Similarity=0.071 Sum_probs=106.3
Q ss_pred EEEEeEEECCCCc--EEEEEEeccCCceEEEEEEECCCCceec---ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 132 AALIKVSVSEDAK--YLAYALSYSGSDWATIKLMRIEDQIVEA---DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 132 ~~~~~~~~SPDG~--~la~~~~~~G~e~~~i~v~dl~~g~~~~---~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
.++..+.|+|+-. +|. .|++...|-+|+...=+.+. .... .+..++-.|.|| |+.+-
T Consensus 84 gsitaL~F~~~~S~shLl-----S~sdDG~i~iw~~~~W~~~~slK~H~~--~Vt~lsiHPS~K-LALsV---------- 145 (362)
T KOG0294|consen 84 GSITALKFYPPLSKSHLL-----SGSDDGHIIIWRVGSWELLKSLKAHKG--QVTDLSIHPSGK-LALSV---------- 145 (362)
T ss_pred cceEEEEecCCcchhhee-----eecCCCcEEEEEcCCeEEeeeeccccc--ccceeEecCCCc-eEEEE----------
Confidence 3466788888774 444 34555689999975433221 1122 247889999987 44442
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
++...+..|+|-.+... .+..... ....+.|+|.|.+.++...+ .-++|-.+.+..
T Consensus 146 --------g~D~~lr~WNLV~Gr~a--~v~~L~~---~at~v~w~~~Gd~F~v~~~~----~i~i~q~d~A~v------- 201 (362)
T KOG0294|consen 146 --------GGDQVLRTWNLVRGRVA--FVLNLKN---KATLVSWSPQGDHFVVSGRN----KIDIYQLDNASV------- 201 (362)
T ss_pred --------cCCceeeeehhhcCccc--eeeccCC---cceeeEEcCCCCEEEEEecc----EEEEEecccHhH-------
Confidence 23446778888665433 2322222 22458999999987766532 244555554331
Q ss_pred cccCCCCCcEEeeecccceEEEEEe-cCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec--CCEE
Q 004766 287 KKRDGLLPFVKLIDGFDAQYEVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN--LNQM 363 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~~~~~~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~--~~~l 363 (732)
+..+... .......+ ++..|++- +.+..+-..|.+.......+..|. ..+.++.... ...+
T Consensus 202 --------~~~i~~~--~r~l~~~~l~~~~L~vG----~d~~~i~~~D~ds~~~~~~~~AH~--~RVK~i~~~~~~~~~~ 265 (362)
T KOG0294|consen 202 --------FREIENP--KRILCATFLDGSELLVG----GDNEWISLKDTDSDTPLTEFLAHE--NRVKDIASYTNPEHEY 265 (362)
T ss_pred --------hhhhhcc--ccceeeeecCCceEEEe----cCCceEEEeccCCCccceeeecch--hheeeeEEEecCCceE
Confidence 1111111 11111122 34555432 223346666766544455566665 5577776543 3578
Q ss_pred EEEEecCCeeEEEEEeCCC
Q 004766 364 IVSYLSDVKYVLQIRDLKN 382 (732)
Q Consensus 364 ~~~~~~~g~~~l~~~d~~~ 382 (732)
+++...+| .|.+||++.
T Consensus 266 lvTaSSDG--~I~vWd~~~ 282 (362)
T KOG0294|consen 266 LVTASSDG--FIKVWDIDM 282 (362)
T ss_pred EEEeccCc--eEEEEEccc
Confidence 88888886 677888763
No 410
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.05 E-value=4 Score=40.37 Aligned_cols=214 Identities=14% Similarity=0.064 Sum_probs=106.6
Q ss_pred eeEEEEeCC-cEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 181 SSIAWTHDS-KGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 181 ~~~~WspDg-~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
.+++++|-. +.++|.+.+. ...++.+..+.+.- +++. ...+.-|+..-.+||||++|+.
T Consensus 71 Hgi~~~p~~~ravafARrPG------------------tf~~vfD~~~~~~p-v~~~-s~~~RHfyGHGvfs~dG~~LYA 130 (366)
T COG3490 71 HGIAFHPALPRAVAFARRPG------------------TFAMVFDPNGAQEP-VTLV-SQEGRHFYGHGVFSPDGRLLYA 130 (366)
T ss_pred CCeecCCCCcceEEEEecCC------------------ceEEEECCCCCcCc-EEEe-cccCceeecccccCCCCcEEEe
Confidence 567777764 5677776544 12455565554332 2232 2223345556789999999987
Q ss_pred EEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEee-ecccceEEEEEecCCeEEEEeC----C----------CC
Q 004766 260 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFDAQYEVIANDDTVFTFLTN----K----------DA 324 (732)
Q Consensus 260 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~s~dg~~l~~~s~----~----------~~ 324 (732)
+-++.+....-|-++|...+-+. .-... .+...--..|.+||+.+.+.-. . +.
T Consensus 131 TEndfd~~rGViGvYd~r~~fqr------------vgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNlds 198 (366)
T COG3490 131 TENDFDPNRGVIGVYDAREGFQR------------VGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDS 198 (366)
T ss_pred ecCCCCCCCceEEEEecccccce------------ecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhh
Confidence 76554433445666776542100 10111 1111111248889987775432 0 11
Q ss_pred CCceEEEEeCCCCCCce-EeccCC-CCCceeEEEEecCCEEEEEEecCCe----eEEEEEeCCCCceeeecccccc----
Q 004766 325 PKYKIIRVDLKEPNDWF-EVIPEA-ERDVLESATAVNLNQMIVSYLSDVK----YVLQIRDLKNGSLLHQLPIEIG---- 394 (732)
Q Consensus 325 ~~~~l~~~d~~~~~~~~-~l~~~~-~~~~l~~~~~~~~~~l~~~~~~~g~----~~l~~~d~~~g~~~~~l~~~~g---- 394 (732)
-.-.|..+|..++.-++ ...|+. ....+.-+.+.+++.+++...-.|. +-|.-.-. .|+.++.+.+|..
T Consensus 199 MePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~-~g~~l~~~~~pee~~~~ 277 (366)
T COG3490 199 MEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFR-KGEPLEFLDLPEEQTAA 277 (366)
T ss_pred cCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeecc-CCCcCcccCCCHHHHHH
Confidence 12356666655554111 122321 1233455666666777776554332 33333322 2555566665521
Q ss_pred ---eeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 395 ---SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 395 ---~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.+.+++.+.+...+ ..+|+.- .....+|.++|.
T Consensus 278 ~anYigsiA~n~~~glV--~lTSP~G-N~~vi~da~tG~ 313 (366)
T COG3490 278 FANYIGSIAANRRDGLV--ALTSPRG-NRAVIWDAATGA 313 (366)
T ss_pred HHhhhhheeecccCCeE--EEecCCC-CeEEEEEcCCCc
Confidence 23344444443333 3445432 456788999984
No 411
>PRK02888 nitrous-oxide reductase; Validated
Probab=95.03 E-value=1.2 Score=49.45 Aligned_cols=150 Identities=10% Similarity=0.107 Sum_probs=79.4
Q ss_pred EeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCC
Q 004766 247 SGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPK 326 (732)
Q Consensus 247 ~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~ 326 (732)
.+.++|||+++++++.+... ...+..++..... +.... .... ...+.++|+..++ + .
T Consensus 239 ~v~~spdGk~afvTsyNsE~-G~tl~em~a~e~d--------------~~vvf-ni~~-iea~vkdGK~~~V--~----g 295 (635)
T PRK02888 239 NVDTDYDGKYAFSTCYNSEE-GVTLAEMMAAERD--------------WVVVF-NIAR-IEEAVKAGKFKTI--G----G 295 (635)
T ss_pred cceECCCCCEEEEeccCccc-CcceeeeccccCc--------------eEEEE-chHH-HHHhhhCCCEEEE--C----C
Confidence 57889999999887643221 2334445443210 11111 1110 1124567887665 1 2
Q ss_pred ceEEEEeCCC----CCCceEeccCCCCCceeEEEEecCCE-EEEEEecCCeeEEEEEeCCCCce------------eeec
Q 004766 327 YKIIRVDLKE----PNDWFEVIPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDLKNGSL------------LHQL 389 (732)
Q Consensus 327 ~~l~~~d~~~----~~~~~~l~~~~~~~~l~~~~~~~~~~-l~~~~~~~g~~~l~~~d~~~g~~------------~~~l 389 (732)
.++..+|..+ +......++-. ..-.++.+++|++ +++...- .+.+.++|+++-+. ..++
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIPVG--KsPHGV~vSPDGkylyVankl--S~tVSVIDv~k~k~~~~~~~~~~~~vvaev 371 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVPVP--KNPHGVNTSPDGKYFIANGKL--SPTVTVIDVRKLDDLFDGKIKPRDAVVAEP 371 (635)
T ss_pred CEEEEEECCccccCCcceEEEEECC--CCccceEECCCCCEEEEeCCC--CCcEEEEEChhhhhhhhccCCccceEEEee
Confidence 4688899877 22234444433 3346788888654 4444322 36788999875331 2233
Q ss_pred ccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 390 PIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 390 ~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
.+..+.+ ...++.+|+ .|+|.-.-+++..||+.+
T Consensus 372 evGlGPL-HTaFDg~G~----aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 372 ELGLGPL-HTAFDGRGN----AYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred ccCCCcc-eEEECCCCC----EEEeEeecceeEEEehHH
Confidence 3333332 223455554 334444556888888765
No 412
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=94.99 E-value=0.099 Score=53.15 Aligned_cols=120 Identities=18% Similarity=0.183 Sum_probs=79.7
Q ss_pred CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHh---------cCcEEEEEcccCCCCCchhHH
Q 004766 460 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH---------LGAVFCIANIRGGGEYGEEWH 530 (732)
Q Consensus 460 dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~---------~G~~v~~~~~rG~g~~g~~~~ 530 (732)
.| .+|+..-+.|...+..++.-.||+.||.+|+-. .|-. +..+|.+ .-|-|++|..+|-| |.
T Consensus 132 eG-L~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~--EFyk-fIPlLT~p~~hg~~~d~~FEVI~PSlPGyg-----wS 202 (469)
T KOG2565|consen 132 EG-LKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVR--EFYK-FIPLLTDPKRHGNESDYAFEVIAPSLPGYG-----WS 202 (469)
T ss_pred cc-eeEEEEEecCCccccCCcccceEEecCCCchHH--HHHh-hhhhhcCccccCCccceeEEEeccCCCCcc-----cC
Confidence 68 999998888876544444445778899999732 2221 2233332 23789999999866 44
Q ss_pred hcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEc
Q 004766 531 KGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH 592 (732)
Q Consensus 531 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~ 592 (732)
++ ....+-|..+-..-..+-+...|+ ++..|.|+=+|..++..++..+|+...+.=+.
T Consensus 203 d~-~sk~GFn~~a~ArvmrkLMlRLg~---nkffiqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 203 DA-PSKTGFNAAATARVMRKLMLRLGY---NKFFIQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred cC-CccCCccHHHHHHHHHHHHHHhCc---ceeEeecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 43 233344444333333444556676 68999999999999999999999987766433
No 413
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=94.95 E-value=1.9 Score=43.12 Aligned_cols=204 Identities=16% Similarity=0.139 Sum_probs=106.9
Q ss_pred eeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCC-CCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 181 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQ-SEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 181 ~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~-~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
..-+|++|++.|+.+... ++|.++.....+ -+ ......+++.....+.|+|-+..|+-
T Consensus 14 tchAwn~drt~iAv~~~~-------------------~evhiy~~~~~~~w~--~~htls~Hd~~vtgvdWap~snrIvt 72 (361)
T KOG1523|consen 14 TCHAWNSDRTQIAVSPNN-------------------HEVHIYSMLGADLWE--PAHTLSEHDKIVTGVDWAPKSNRIVT 72 (361)
T ss_pred eeeeecCCCceEEeccCC-------------------ceEEEEEecCCCCce--eceehhhhCcceeEEeecCCCCceeE
Confidence 678999999999987532 234444432221 11 22223344556678999999999877
Q ss_pred EEecCCcceEEEEEEeC-CCCCCCcccccccCCCCCcEEeee-cccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCC
Q 004766 260 CIEENCDPVNKVYYCDL-SALPEGLEGFKKRDGLLPFVKLID-GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 337 (732)
Q Consensus 260 ~~~~~~~~~~~l~~~d~-~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 337 (732)
.+.+.. -|++.. +++. .+|...|.. ........|+|.++.|++-+. +....++.+ +..
T Consensus 73 cs~drn-----ayVw~~~~~~~-----------WkptlvLlRiNrAAt~V~WsP~enkFAVgSg--ar~isVcy~--E~E 132 (361)
T KOG1523|consen 73 CSHDRN-----AYVWTQPSGGT-----------WKPTLVLLRINRAATCVKWSPKENKFAVGSG--ARLISVCYY--EQE 132 (361)
T ss_pred ccCCCC-----ccccccCCCCe-----------eccceeEEEeccceeeEeecCcCceEEeccC--ccEEEEEEE--ecc
Confidence 665433 344444 3321 222222222 222233359999988876433 222333333 333
Q ss_pred CCce--EeccCCCCCceeEEEEecCCEEEEEEecCCeeEE---EEEeCCCCce----eeeccc---------ccceeeEe
Q 004766 338 NDWF--EVIPEAERDVLESATAVNLNQMIVSYLSDVKYVL---QIRDLKNGSL----LHQLPI---------EIGSVNAI 399 (732)
Q Consensus 338 ~~~~--~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l---~~~d~~~g~~----~~~l~~---------~~g~v~~~ 399 (732)
.+|- ..+...-...+..+.|.+++-++....-|+.-++ |+-+++.... -.+++| ..|.+..+
T Consensus 133 NdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v 212 (361)
T KOG1523|consen 133 NDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGV 212 (361)
T ss_pred cceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeee
Confidence 3331 0111111245677888886666766666765443 3333331100 011221 13456677
Q ss_pred ecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 400 SARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 400 ~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.+++.|+.|.+.. ++..++..|....
T Consensus 213 ~fs~sG~~lawv~----Hds~v~~~da~~p 238 (361)
T KOG1523|consen 213 LFSPSGNRLAWVG----HDSTVSFVDAAGP 238 (361)
T ss_pred EeCCCCCEeeEec----CCCceEEeecCCC
Confidence 8889999887653 3456777675544
No 414
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=94.88 E-value=0.62 Score=49.95 Aligned_cols=97 Identities=18% Similarity=0.199 Sum_probs=55.9
Q ss_pred CceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc------cc-----
Q 004766 326 KYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE------IG----- 394 (732)
Q Consensus 326 ~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~------~g----- 394 (732)
...||+++|+.|.-..++-... ..+..+.+..-+.|+.....+| .+-.||..+...+..|... ++
T Consensus 154 g~evYRlNLEqGrfL~P~~~~~--~~lN~v~in~~hgLla~Gt~~g--~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~ 229 (703)
T KOG2321|consen 154 GSEVYRLNLEQGRFLNPFETDS--GELNVVSINEEHGLLACGTEDG--VVEFWDPRDKSRVGTLDAASSVNSHPGGDAAP 229 (703)
T ss_pred CcceEEEEcccccccccccccc--ccceeeeecCccceEEecccCc--eEEEecchhhhhheeeecccccCCCccccccC
Confidence 3468899998876222221111 2345555555466888877774 5667887644433333321 22
Q ss_pred eeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 395 SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 395 ~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+|+.+.++-+|=.+.+. +..+.+|.||+.+.+
T Consensus 230 svTal~F~d~gL~~aVG----ts~G~v~iyDLRa~~ 261 (703)
T KOG2321|consen 230 SVTALKFRDDGLHVAVG----TSTGSVLIYDLRASK 261 (703)
T ss_pred cceEEEecCCceeEEee----ccCCcEEEEEcccCC
Confidence 36666666556455544 334789999998763
No 415
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=94.87 E-value=1.4 Score=48.61 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=63.5
Q ss_pred EEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc---cceEEEEEecCCeEEEEeC
Q 004766 245 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF---DAQYEVIANDDTVFTFLTN 321 (732)
Q Consensus 245 ~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~s~dg~~l~~~s~ 321 (732)
.+++++.|..++++....+. .|.+++.+.++ ..+...+. +....-+.-|-.-+|+.+.
T Consensus 599 lYDm~Vdp~~k~v~t~cQDr-----nirif~i~sgK--------------q~k~FKgs~~~eG~lIKv~lDPSgiY~atS 659 (1080)
T KOG1408|consen 599 LYDMAVDPTSKLVVTVCQDR-----NIRIFDIESGK--------------QVKSFKGSRDHEGDLIKVILDPSGIYLATS 659 (1080)
T ss_pred EEEeeeCCCcceEEEEeccc-----ceEEEeccccc--------------eeeeecccccCCCceEEEEECCCccEEEEe
Confidence 34667778888877665432 26666776643 12222221 1222222223334555544
Q ss_pred CCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCC
Q 004766 322 KDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLK 381 (732)
Q Consensus 322 ~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~ 381 (732)
-. +-.|..+|.-+++.....+.|. ..+.++.+.+|=+-++....|| =|++|.+.
T Consensus 660 cs--dktl~~~Df~sgEcvA~m~GHs--E~VTG~kF~nDCkHlISvsgDg--CIFvW~lp 713 (1080)
T KOG1408|consen 660 CS--DKTLCFVDFVSGECVAQMTGHS--EAVTGVKFLNDCKHLISVSGDG--CIFVWKLP 713 (1080)
T ss_pred ec--CCceEEEEeccchhhhhhcCcc--hheeeeeecccchhheeecCCc--eEEEEECc
Confidence 22 3358889988887666677776 5688898888633344555554 46666654
No 416
>KOG4328 consensus WD40 protein [Function unknown]
Probab=94.81 E-value=3.9 Score=42.94 Aligned_cols=246 Identities=10% Similarity=0.053 Sum_probs=125.6
Q ss_pred EEEEeEEECCCCc-EEEEEEeccCCceEEEEEEECCCCcee-----cccccceeeeeEEEEeCCcEEEEEEecCCCCCCC
Q 004766 132 AALIKVSVSEDAK-YLAYALSYSGSDWATIKLMRIEDQIVE-----ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 132 ~~~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl~~g~~~-----~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 205 (732)
..+...+|.|... .+..+-+.. .+|-+||+.+.+.- --+.....++++.|+|-+..-+|.+
T Consensus 187 ~Rit~l~fHPt~~~~lva~GdK~----G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ss--------- 253 (498)
T KOG4328|consen 187 RRITSLAFHPTENRKLVAVGDKG----GQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSS--------- 253 (498)
T ss_pred cceEEEEecccCcceEEEEccCC----CcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeee---------
Confidence 4577889999877 455443433 47899999643321 1222333357889999765444442
Q ss_pred CCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccc
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG 285 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 285 (732)
.+...|.+.++.+...+ .|+...++..++.+..++.+.+.+++..+-+ ..-++|+.+.....
T Consensus 254 ---------SyDGtiR~~D~~~~i~e--~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G-----~f~~iD~R~~~s~~-- 315 (498)
T KOG4328|consen 254 ---------SYDGTIRLQDFEGNISE--EVLSLDTDNIWFSSLDFSAESRSVLFGDNVG-----NFNVIDLRTDGSEY-- 315 (498)
T ss_pred ---------ccCceeeeeeecchhhH--HHhhcCccceeeeeccccCCCccEEEeeccc-----ceEEEEeecCCccc--
Confidence 12335788888776554 3443323345667888888888888775433 24456665532110
Q ss_pred ccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC---C-ceEeccCCCCCceeEEEEecC-
Q 004766 286 FKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN---D-WFEVIPEAERDVLESATAVNL- 360 (732)
Q Consensus 286 ~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~---~-~~~l~~~~~~~~l~~~~~~~~- 360 (732)
.++ .+-.. ......+.|-..+++..+..+ ..+..+|+..-. . .--.+++. ..+.++.+++.
T Consensus 316 -------~~~-~lh~k-KI~sv~~NP~~p~~laT~s~D---~T~kIWD~R~l~~K~sp~lst~~Hr--rsV~sAyFSPs~ 381 (498)
T KOG4328|consen 316 -------ENL-RLHKK-KITSVALNPVCPWFLATASLD---QTAKIWDLRQLRGKASPFLSTLPHR--RSVNSAYFSPSG 381 (498)
T ss_pred -------hhh-hhhhc-ccceeecCCCCchheeecccC---cceeeeehhhhcCCCCcceeccccc--ceeeeeEEcCCC
Confidence 001 11111 111112445433443333222 235566764422 1 12234454 67888888874
Q ss_pred CEEEEEEecCCeeEEEEEeCC----CCceeeecccc--cc-eeeE--eecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 361 NQMIVSYLSDVKYVLQIRDLK----NGSLLHQLPIE--IG-SVNA--ISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 361 ~~l~~~~~~~g~~~l~~~d~~----~g~~~~~l~~~--~g-~v~~--~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+. +++...+ ..|.+||.. .-..+..|.-. .+ .++- ..+.|+.+.+++ . ..|..+-.+|...+
T Consensus 382 gt-l~TT~~D--~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~v--g--~~~r~IDv~~~~~~ 452 (498)
T KOG4328|consen 382 GT-LLTTCQD--NEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVV--G--RYPRPIDVFDGNGG 452 (498)
T ss_pred Cc-eEeeccC--CceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEE--e--ccCcceeEEcCCCC
Confidence 45 4554444 478888852 11222233211 11 1111 235666554432 2 34555767776555
No 417
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.62 E-value=12 Score=43.87 Aligned_cols=63 Identities=17% Similarity=0.188 Sum_probs=43.3
Q ss_pred EEECCCCcEEEEEEeccC----CceEEEEEEECCCCc-eecccccceeeeeEEEEeCCcEEEEEEecC
Q 004766 137 VSVSEDAKYLAYALSYSG----SDWATIKLMRIEDQI-VEADALSWFKFSSIAWTHDSKGFFYSRYPA 199 (732)
Q Consensus 137 ~~~SPDG~~la~~~~~~G----~e~~~i~v~dl~~g~-~~~~~~~~~~~~~~~WspDg~~l~y~~~~~ 199 (732)
...|||.+++++..+..- +-....+++++.+++ .......+..+.-+.|||.+..|+|+...+
T Consensus 102 ~~~s~d~~~~~~~~~~~~~~rhs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp~~~~l~yv~~~n 169 (755)
T KOG2100|consen 102 DLISPDRKYILLGRNYKKRFRHSYTAKYHLYDLNTGEKLHPPEYEGSKIQYASWSPLGNDLAYVLHNN 169 (755)
T ss_pred cccChhhhhheeccCcccccceeeEEEEEEEEcCCCCcccCcccCCCeeEEEEEcCCCCEEEEEEecc
Confidence 478999999999876321 112366788888887 222222333356799999999999997644
No 418
>KOG4328 consensus WD40 protein [Function unknown]
Probab=94.62 E-value=7 Score=41.11 Aligned_cols=244 Identities=18% Similarity=0.154 Sum_probs=126.1
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce---ecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV---EADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~---~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
..++.+.|||-..--.|+++.+| +|+..|++++.. +.....+..+++..++.+...+++...-
T Consensus 235 ~~Vs~l~F~P~n~s~i~ssSyDG----tiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~---------- 300 (498)
T KOG4328|consen 235 GPVSGLKFSPANTSQIYSSSYDG----TIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNV---------- 300 (498)
T ss_pred ccccceEecCCChhheeeeccCc----eeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecc----------
Confidence 34788999998877777776665 799999998752 2221233446788888888888876321
Q ss_pred CCcccCCcccEEEEEECCCCCCC--CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSE--DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~--~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
. .+-++++.++..+ ...+. ..-+.++++.|-..+++.+++-.. + ..+||+.....+
T Consensus 301 -------G--~f~~iD~R~~~s~~~~~~lh-----~kKI~sv~~NP~~p~~laT~s~D~--T--~kIWD~R~l~~K---- 358 (498)
T KOG4328|consen 301 -------G--NFNVIDLRTDGSEYENLRLH-----KKKITSVALNPVCPWFLATASLDQ--T--AKIWDLRQLRGK---- 358 (498)
T ss_pred -------c--ceEEEEeecCCccchhhhhh-----hcccceeecCCCCchheeecccCc--c--eeeeehhhhcCC----
Confidence 1 2334444444332 22221 123468889998888877664332 2 455676552110
Q ss_pred cccCCCCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCC---CCCCceEeccCCCC--CceeE--EEEe
Q 004766 287 KKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK---EPNDWFEVIPEAER--DVLES--ATAV 358 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~---~~~~~~~l~~~~~~--~~l~~--~~~~ 358 (732)
..|....+.... ....+|||+|..|+ .+..+ ..|-++|.. ...+....++|... +.+.- ..|.
T Consensus 359 -----~sp~lst~~HrrsV~sAyFSPs~gtl~-TT~~D---~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~ 429 (498)
T KOG4328|consen 359 -----ASPFLSTLPHRRSVNSAYFSPSGGTLL-TTCQD---NEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWD 429 (498)
T ss_pred -----CCcceecccccceeeeeEEcCCCCceE-eeccC---CceEEeecccccccCCccceeeccCcccccccchhheeC
Confidence 112222222211 12236999888844 33332 235555542 11123344555421 23332 3566
Q ss_pred cCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeE-eecccCCcEEEEEEecCCCCceEEEEE
Q 004766 359 NLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNA-ISARREDSVVFISFTSFLIPGIVYQCN 425 (732)
Q Consensus 359 ~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~-~~~s~d~~~l~~~~ss~~~p~~~y~~d 425 (732)
++..+++..+-- ..|-++|...|+.+.++-.| ..+|.. ..+.|-+..++ +..+.-+.+|++.
T Consensus 430 P~~~li~vg~~~--r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~---aG~~s~Gki~vft 493 (498)
T KOG4328|consen 430 PDYNLIVVGRYP--RPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLA---AGGNSSGKIYVFT 493 (498)
T ss_pred CCccEEEEeccC--cceeEEcCCCCEEeeeccCccccccccceeeccccccee---ccCCccceEEEEe
Confidence 644455554433 35888887645434455444 222222 23445444332 2333445666553
No 419
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=94.59 E-value=0.069 Score=52.15 Aligned_cols=72 Identities=19% Similarity=0.221 Sum_probs=44.7
Q ss_pred ccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCC----CeeeEEEE
Q 004766 519 IRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRP----DLFGCALA 591 (732)
Q Consensus 519 ~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p----~~f~a~v~ 591 (732)
+||.-.....|.+........ ...-...|++|+.+.--..+++|.+.|||-||.||..++...+ +++..+++
T Consensus 43 FRGTd~t~~~W~ed~~~~~~~-~~~~q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~ 118 (224)
T PF11187_consen 43 FRGTDDTLVDWKEDFNMSFQD-ETPQQKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYS 118 (224)
T ss_pred EECCCCchhhHHHHHHhhcCC-CCHHHHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEE
Confidence 577655556677665443321 2233456667766542223457999999999999998888733 34555553
No 420
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=94.38 E-value=0.11 Score=55.77 Aligned_cols=90 Identities=19% Similarity=0.180 Sum_probs=66.3
Q ss_pred CCccEEEEEcCCCCc-cCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHc--
Q 004766 479 GSHPCLLYGYGGFNI-SVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA-- 555 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-- 555 (732)
...-+|+++|||.-. ....+..+-..+|....|.-++.+||--..| ..-+...+.+.-|..|++.+
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPE-----------aPFPRaleEv~fAYcW~inn~a 462 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPE-----------APFPRALEEVFFAYCWAINNCA 462 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCC-----------CCCCcHHHHHHHHHHHHhcCHH
Confidence 345699999998433 3344555555677777899999999876543 44566788889999999876
Q ss_pred --CCCCCCcEEEEecChhHHHHHHHHh
Q 004766 556 --GYTQSRKLCIEGGSNGGLLVGACIN 580 (732)
Q Consensus 556 --~~~d~~~i~i~G~S~GG~l~~~~~~ 580 (732)
|.+ .+||++.|-|+||.|..-++.
T Consensus 463 llG~T-gEriv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 463 LLGST-GERIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred HhCcc-cceEEEeccCCCcceeehhHH
Confidence 554 589999999999987654433
No 421
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.38 E-value=0.12 Score=55.87 Aligned_cols=140 Identities=14% Similarity=0.074 Sum_probs=80.5
Q ss_pred EEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC--------CCc-------------ChhHHHHHHhcCc
Q 004766 454 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT--------PSF-------------SVSRTILMRHLGA 512 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~--------~~~-------------~~~~~~~l~~~G~ 512 (732)
+.+....+ ..+..|++...+ .....|+||++-||||.+.. |.- ...-..|.. =.
T Consensus 42 ~~v~~~~~-~~lfy~f~es~~--~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~--~a 116 (433)
T PLN03016 42 IGIGEDEN-VQFFYYFIKSEN--NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTK--MA 116 (433)
T ss_pred EEecCCCC-eEEEEEEEecCC--CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhh--cC
Confidence 33333345 667777765543 24578999999999987642 110 000123333 35
Q ss_pred EEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHH-HHHcCCCCCCcEEEEecChhHHHHHHHHhh----C-----
Q 004766 513 VFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEY-LISAGYTQSRKLCIEGGSNGGLLVGACINQ----R----- 582 (732)
Q Consensus 513 ~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~-l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~----~----- 582 (732)
.++.+|.+-|.||...-.... ........+|+..++.. +..........+.|.|.|+||..+..++.. +
T Consensus 117 nllfiDqPvGtGfSy~~~~~~-~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 117 NIIFLDQPVGSGFSYSKTPID-KTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred cEEEecCCCCCCccCCCCCCC-ccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 677788777666653211111 11111233566666554 444333345679999999999866655442 2
Q ss_pred -CCeeeEEEEcCCccccc
Q 004766 583 -PDLFGCALAHVGVMDML 599 (732)
Q Consensus 583 -p~~f~a~v~~~p~~d~~ 599 (732)
+=-+++++++.|++|..
T Consensus 196 ~~inLkGi~iGNg~t~~~ 213 (433)
T PLN03016 196 PPINLQGYMLGNPVTYMD 213 (433)
T ss_pred CcccceeeEecCCCcCch
Confidence 12578999999988764
No 422
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=94.34 E-value=0.6 Score=51.84 Aligned_cols=118 Identities=8% Similarity=-0.053 Sum_probs=75.5
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc--eecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI--VEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~--~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
++..++|||--....++...+| .|.+||+.--. .+..+....-...+.|+|++.+|+-.
T Consensus 178 SiRDV~fsp~~~~~F~s~~dsG----~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATG--------------- 238 (839)
T KOG0269|consen 178 SIRDVKFSPGYGNKFASIHDSG----YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATG--------------- 238 (839)
T ss_pred hhhceeeccCCCceEEEecCCc----eEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeec---------------
Confidence 4778999996655555555444 78999996433 12223333234678999988777754
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
+|...|.+|+.+++........+.. .-...+.|-|+..+.+.+.+-.. ...|+++|+..
T Consensus 239 ----GRDK~vkiWd~t~~~~~~~~tInTi---apv~rVkWRP~~~~hLAtcsmv~--dtsV~VWDvrR 297 (839)
T KOG0269|consen 239 ----GRDKMVKIWDMTDSRAKPKHTINTI---APVGRVKWRPARSYHLATCSMVV--DTSVHVWDVRR 297 (839)
T ss_pred ----CCCccEEEEeccCCCccceeEEeec---ceeeeeeeccCccchhhhhhccc--cceEEEEeecc
Confidence 4556789999987665543333221 12346889999887655443333 46789999875
No 423
>PLN02209 serine carboxypeptidase
Probab=94.28 E-value=0.21 Score=54.10 Aligned_cols=139 Identities=9% Similarity=0.097 Sum_probs=80.0
Q ss_pred EEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcCh---------------------hHHHHHHhcCc
Q 004766 454 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSV---------------------SRTILMRHLGA 512 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~---------------------~~~~~l~~~G~ 512 (732)
+.+....| ..+..+++.... .....|+|+++-||||.+....+.. .-..|.. =.
T Consensus 44 ~~v~~~~~-~~lf~~f~es~~--~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~--~a 118 (437)
T PLN02209 44 IGIGEEEN-VQFFYYFIKSDK--NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTK--TA 118 (437)
T ss_pred EEecCCCC-eEEEEEEEecCC--CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhh--cC
Confidence 34433345 567776665443 2356899999999998764321100 0012333 34
Q ss_pred EEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHH-HcCCCCCCcEEEEecChhHHHHHHHHh----hC-----
Q 004766 513 VFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLI-SAGYTQSRKLCIEGGSNGGLLVGACIN----QR----- 582 (732)
Q Consensus 513 ~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~-~~~~~d~~~i~i~G~S~GG~l~~~~~~----~~----- 582 (732)
.++.+|.+-|.||...-..... ..-..+.+|+..++.... ....-....+.|+|.|+||..+-.++. .+
T Consensus 119 nllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~ 197 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCN 197 (437)
T ss_pred cEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccC
Confidence 6777787777666532111111 111233467776666443 333334467999999999986555543 22
Q ss_pred -CCeeeEEEEcCCcccc
Q 004766 583 -PDLFGCALAHVGVMDM 598 (732)
Q Consensus 583 -p~~f~a~v~~~p~~d~ 598 (732)
+=-+++++++.|++|.
T Consensus 198 ~~inl~Gi~igng~td~ 214 (437)
T PLN02209 198 PPINLQGYVLGNPITHI 214 (437)
T ss_pred CceeeeeEEecCcccCh
Confidence 1257899999998875
No 424
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=94.25 E-value=2.6 Score=43.03 Aligned_cols=118 Identities=17% Similarity=0.213 Sum_probs=72.9
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCC------ceec--ccccceeeeeEEEEeCCcEEEEEEecCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQ------IVEA--DALSWFKFSSIAWTHDSKGFFYSRYPAPKE 202 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g------~~~~--~~~~~~~~~~~~WspDg~~l~y~~~~~~~~ 202 (732)
+.-+..+.||.+|++|| .|.+....+||.++.- +++. ......++..++|. -+.+++|+.
T Consensus 56 ~GCiNAlqFS~N~~~L~-----SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~-~~N~~~~SG------ 123 (609)
T KOG4227|consen 56 TGCINALQFSHNDRFLA-----SGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFD-LENRFLYSG------ 123 (609)
T ss_pred ccccceeeeccCCeEEe-----ecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEc-cCCeeEecC------
Confidence 44578899999999998 4455578889987621 1111 11222234567776 345566652
Q ss_pred CCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCC
Q 004766 203 GKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
.+..+|.+|++.+.+. +-|+.+.++.+-++.+..+|-...++.++. ...+.++|....
T Consensus 124 ------------~~~~~VI~HDiEt~qs--i~V~~~~~~~~~VY~m~~~P~DN~~~~~t~-----~~~V~~~D~Rd~ 181 (609)
T KOG4227|consen 124 ------------ERWGTVIKHDIETKQS--IYVANENNNRGDVYHMDQHPTDNTLIVVTR-----AKLVSFIDNRDR 181 (609)
T ss_pred ------------CCcceeEeeeccccee--eeeecccCcccceeecccCCCCceEEEEec-----CceEEEEeccCC
Confidence 3445799999998754 355655555555667788887555544432 234667776553
No 425
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=94.20 E-value=3.9 Score=48.25 Aligned_cols=60 Identities=15% Similarity=0.106 Sum_probs=38.6
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEe
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRY 197 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~ 197 (732)
.+-++.+--|+.-|.++.. . .+|.+.|.++....-...-...+...+||||++.+++++.
T Consensus 70 ~i~s~~fl~d~~~i~v~~~-~----G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~ 129 (1265)
T KOG1920|consen 70 EIVSVQFLADTNSICVITA-L----GDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITG 129 (1265)
T ss_pred ceEEEEEecccceEEEEec-C----CcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeC
Confidence 4566777777777766642 2 2567778877663211111112478899999999998875
No 426
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.19 E-value=6.7 Score=39.17 Aligned_cols=203 Identities=10% Similarity=0.037 Sum_probs=99.7
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccce-eeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWF-KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.++++.|+||-+.|.-+.+ +..+|..++.++.-.......+. +.-.++|.-+|+. +.+.
T Consensus 87 nvS~LTynp~~rtLFav~n----~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~f-vi~d--------------- 146 (316)
T COG3204 87 NVSSLTYNPDTRTLFAVTN----KPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQF-VIVD--------------- 146 (316)
T ss_pred cccceeeCCCcceEEEecC----CCceEEEEecCCceEEEecccccCChhHeEEecCCEE-EEEe---------------
Confidence 3789999999987754432 22467777765432222222111 2356788877653 3331
Q ss_pred ccCCcccEEEEEECCCCCC----CC-eEEEecC-C-CCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 212 TDSNLYHEFYYHFLGTKQS----ED-ILCWKDP-E-HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~----~~-~~v~~~~-~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
.+.++++.+.+..+.. .. .+-.+.. . +.+ +.+++|+|..+.+++...+.. ..||.+.... ..+.
T Consensus 147 ---ER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~G-fEGlA~d~~~~~l~~aKEr~P---~~I~~~~~~~--~~l~ 217 (316)
T COG3204 147 ---ERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKG-FEGLAWDPVDHRLFVAKERNP---IGIFEVTQSP--SSLS 217 (316)
T ss_pred ---hhcceEEEEEEcCCccEEeccceEEeccccCCCCcC-ceeeecCCCCceEEEEEccCC---cEEEEEecCC--cccc
Confidence 2445566666543311 01 1111111 1 233 358999999999988876554 5677776322 1110
Q ss_pred cccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCC-------CceeEEEE
Q 004766 285 GFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAER-------DVLESATA 357 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-------~~l~~~~~ 357 (732)
. +....+...+.+.- .+.+-..+.+..++|++++++.. .|..+|+++.- ...+.-.... ...+++..
T Consensus 218 ~-~~~~~~~~~~~~f~-~DvSgl~~~~~~~~LLVLS~ESr---~l~Evd~~G~~-~~~lsL~~g~~gL~~dipqaEGiam 291 (316)
T COG3204 218 V-HASLDPTADRDLFV-LDVSGLEFNAITNSLLVLSDESR---RLLEVDLSGEV-IELLSLTKGNHGLSSDIPQAEGIAM 291 (316)
T ss_pred c-ccccCcccccceEe-eccccceecCCCCcEEEEecCCc---eEEEEecCCCe-eeeEEeccCCCCCcccCCCcceeEE
Confidence 0 00000000001111 01111124555678888887643 57777766542 1211111111 12356676
Q ss_pred ecCCEEEEEEecC
Q 004766 358 VNLNQMIVSYLSD 370 (732)
Q Consensus 358 ~~~~~l~~~~~~~ 370 (732)
.+++.||+.+..+
T Consensus 292 Dd~g~lYIvSEPn 304 (316)
T COG3204 292 DDDGNLYIVSEPN 304 (316)
T ss_pred CCCCCEEEEecCC
Confidence 6656677776665
No 427
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=94.14 E-value=7.5 Score=46.69 Aligned_cols=108 Identities=11% Similarity=0.161 Sum_probs=66.2
Q ss_pred eEEECCCCcEEEEEEeccCC-ceEEEEEEECCCCcee--cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 136 KVSVSEDAKYLAYALSYSGS-DWATIKLMRIEDQIVE--ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~-e~~~i~v~dl~~g~~~--~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
.++|-.||++.|.+.-.... ....|+||+-+ |+.. .+...+. ...++|.|.|..|+-+....
T Consensus 214 ~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gL-e~~l~WrPsG~lIA~~q~~~------------- 278 (928)
T PF04762_consen 214 RISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGL-EGALSWRPSGNLIASSQRLP------------- 278 (928)
T ss_pred EEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCc-cCCccCCCCCCEEEEEEEcC-------------
Confidence 56799999999988752222 36799999977 5532 2223332 26799999999998876421
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEe
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIE 262 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 262 (732)
.+ ..|..+...+ ...............-...+.|++|+.-|++...
T Consensus 279 --~~-~~VvFfErNG-LrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~ 324 (928)
T PF04762_consen 279 --DR-HDVVFFERNG-LRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLE 324 (928)
T ss_pred --CC-cEEEEEecCC-cEeeeEecCCCCCCceeeEEEECCCCCEEEEEec
Confidence 12 3444444332 1222222222112233468999999999998763
No 428
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=94.13 E-value=2.3 Score=42.50 Aligned_cols=212 Identities=12% Similarity=0.074 Sum_probs=111.2
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEEC-CCCceec----ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRI-EDQIVEA----DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl-~~g~~~~----~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
..+.++.|+|-..+|.-.... ..-|||.. ++|+-.+ ..+.++ ...+.|||.+..|+..+.
T Consensus 56 ~~vtgvdWap~snrIvtcs~d-----rnayVw~~~~~~~WkptlvLlRiNrA-At~V~WsP~enkFAVgSg--------- 120 (361)
T KOG1523|consen 56 KIVTGVDWAPKSNRIVTCSHD-----RNAYVWTQPSGGTWKPTLVLLRINRA-ATCVKWSPKENKFAVGSG--------- 120 (361)
T ss_pred cceeEEeecCCCCceeEccCC-----CCccccccCCCCeeccceeEEEeccc-eeeEeecCcCceEEeccC---------
Confidence 456789999999998755433 34578877 5555221 112222 378999999998887541
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEe--cCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWK--DPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
.+--.|+++.-. ++=-|-. ......-+.++.|.|++-.|+..+-+..-+....|+-+++..+...
T Consensus 121 --------ar~isVcy~E~E----NdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~- 187 (361)
T KOG1523|consen 121 --------ARLISVCYYEQE----NDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPT- 187 (361)
T ss_pred --------ccEEEEEEEecc----cceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCC-
Confidence 122233333211 1100000 0000123457889998888776554332223446676776644210
Q ss_pred cccccCCCCCcEEeeeccc--ceE---EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCC-ceEeccCCCCCceeEEEEe
Q 004766 285 GFKKRDGLLPFVKLIDGFD--AQY---EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND-WFEVIPEAERDVLESATAV 358 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~--~~~---~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~l~~~~~~~~l~~~~~~ 358 (732)
.+ +...|+-.|...+. ..+ ..|+|+|.+|.++.... .+...|..++.+ ...+... ...+.++.|.
T Consensus 188 -pW--gsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds----~v~~~da~~p~~~v~~~~~~--~lP~ls~~~i 258 (361)
T KOG1523|consen 188 -PW--GSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDS----TVSFVDAAGPSERVQSVATA--QLPLLSVSWI 258 (361)
T ss_pred -CC--ccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCC----ceEEeecCCCchhccchhhc--cCCceeeEee
Confidence 00 11233333433331 122 14899999999887643 467777766641 2222111 2445566666
Q ss_pred cCCEEEEEEecCCeeEEEEEeCC
Q 004766 359 NLNQMIVSYLSDVKYVLQIRDLK 381 (732)
Q Consensus 359 ~~~~l~~~~~~~g~~~l~~~d~~ 381 (732)
. ..-++....+-.+.++..+-+
T Consensus 259 s-e~~vv~ag~~c~P~lf~~~~~ 280 (361)
T KOG1523|consen 259 S-ENSVVAAGYDCGPVLFVTDEE 280 (361)
T ss_pred c-CCceeecCCCCCceEEEeccc
Confidence 5 333444445544677776644
No 429
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=94.13 E-value=6.8 Score=39.01 Aligned_cols=52 Identities=15% Similarity=0.116 Sum_probs=36.1
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSK 190 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~ 190 (732)
+-...||-||.+++.. +. ..++.+|||++|+..........+....|-+...
T Consensus 75 vL~v~WsddgskVf~g-~~----Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~~~ 126 (347)
T KOG0647|consen 75 VLDVCWSDDGSKVFSG-GC----DKQAKLWDLASGQVSQVAAHDAPVKTCHWVPGMN 126 (347)
T ss_pred eEEEEEccCCceEEee-cc----CCceEEEEccCCCeeeeeecccceeEEEEecCCC
Confidence 4467899999766533 22 2478999999998665555444456778887654
No 430
>PRK13613 lipoprotein LpqB; Provisional
Probab=93.95 E-value=5.7 Score=44.98 Aligned_cols=173 Identities=13% Similarity=0.134 Sum_probs=89.7
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce----ecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV----EADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~----~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
.+..+..|+||+.+|++.. +...+++-.+..+.. ......+.....++|.++| .+..+ ...
T Consensus 364 ~~~s~avS~~g~~~A~v~~----~~~~l~vg~~~~~~~~~~~~~~~~~~~~Lt~PS~d~~g-~vWtv-d~~--------- 428 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISA----DGDSVYVGSLTPGASIGVHSWGVTADGRLTSPSWDGRG-DLWVV-DRD--------- 428 (599)
T ss_pred CccceEEcCCCceEEEEcC----CCcEEEEeccCCCCccccccceeeccCcccCCcCcCCC-CEEEe-cCC---------
Confidence 4668899999999999842 224788877755443 1122222235789999888 56544 111
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCe-eEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPK-YIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~-~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
.. ..++.+..-+++... .| +.+.-.+ -+..+..|+||-++++...... ...|++.-+.....+...+
T Consensus 429 -----~~-~~~vl~v~~~~G~~~--~V-~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g--~~~v~va~V~R~~~G~~~l- 496 (599)
T PRK13613 429 -----PA-DPRLLWLLQGDGEPV--EV-RTPELDGHRVVAVRVARDGVRVALIVEKDG--RRSLQIGRIVRDAKAVVSV- 496 (599)
T ss_pred -----CC-CceEEEEEcCCCcEE--Ee-eccccCCCEeEEEEECCCccEEEEEEecCC--CcEEEEEEEEeCCCCcEEe-
Confidence 11 123332222333221 11 1111112 4678999999999999876544 3445554432211110000
Q ss_pred ccCCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC
Q 004766 288 KRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 338 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 338 (732)
...+.+...... .-..|..+ ..|+++......+..++.+++++..
T Consensus 497 -----~~~~~l~~~l~~v~~~~W~~~-~sL~Vlg~~~~~~~~v~~v~vdG~~ 542 (599)
T PRK13613 497 -----EEFRSLAPELEDVTDMSWAGD-SQLVVLGREEGGVQQARYVQVDGST 542 (599)
T ss_pred -----eccEEeccCCCccceeEEcCC-CEEEEEeccCCCCcceEEEecCCcC
Confidence 011222222111 11247654 5677655333335678999988765
No 431
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=93.83 E-value=7.6 Score=38.49 Aligned_cols=53 Identities=23% Similarity=0.393 Sum_probs=34.3
Q ss_pred EEECCCCcEEEEEEeccCCceEEEEEEECCCCc-------ee-cccccceeeeeEEEEeCCcEEEEEEe
Q 004766 137 VSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI-------VE-ADALSWFKFSSIAWTHDSKGFFYSRY 197 (732)
Q Consensus 137 ~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~-------~~-~~~~~~~~~~~~~WspDg~~l~y~~~ 197 (732)
++.|+||+.||.+.+ ..|.|+-..... .+ .+... ...-++||||+..|+|+..
T Consensus 3 ~~~~~~Gk~lAi~qd------~~iEiRsa~Ddf~si~~kcqVpkD~~P--QWRkl~WSpD~tlLa~a~S 63 (282)
T PF15492_consen 3 LALSSDGKLLAILQD------QCIEIRSAKDDFSSIIGKCQVPKDPNP--QWRKLAWSPDCTLLAYAES 63 (282)
T ss_pred eeecCCCcEEEEEec------cEEEEEeccCCchheeEEEecCCCCCc--hheEEEECCCCcEEEEEcC
Confidence 568999999999864 345555444322 11 12211 2367999999999999853
No 432
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=93.65 E-value=16 Score=41.67 Aligned_cols=59 Identities=20% Similarity=0.193 Sum_probs=42.6
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce--ecccccceeeeeEEEEeCCcEEEEEEec
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV--EADALSWFKFSSIAWTHDSKGFFYSRYP 198 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~--~~~~~~~~~~~~~~WspDg~~l~y~~~~ 198 (732)
.+...+||+||.+|. .+|.| ..+-+|.++|++. ||- +. ...-++.||||+.....+..|
T Consensus 253 ~V~~L~fS~~G~~Ll----SGG~E-~VLv~Wq~~T~~kqfLPR-Lg-s~I~~i~vS~ds~~~sl~~~D 313 (792)
T KOG1963|consen 253 EVNSLSFSSDGAYLL----SGGRE-GVLVLWQLETGKKQFLPR-LG-SPILHIVVSPDSDLYSLVLED 313 (792)
T ss_pred ccceeEEecCCceEe----ecccc-eEEEEEeecCCCcccccc-cC-CeeEEEEEcCCCCeEEEEecC
Confidence 578899999998875 14554 7899999998872 332 21 124789999999987777544
No 433
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=93.57 E-value=4.4 Score=41.93 Aligned_cols=135 Identities=8% Similarity=0.047 Sum_probs=82.4
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccC--CC------
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRG--GG------ 523 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG--~g------ 523 (732)
+.++... ++ .++.+ |++|... ..+.-+||++||-......+........-|.+.||..+....+. ..
T Consensus 63 e~~~L~~-~~-~~fla-L~~~~~~--~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~ 137 (310)
T PF12048_consen 63 EVQWLQA-GE-ERFLA-LWRPANS--AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRA 137 (310)
T ss_pred hcEEeec-CC-EEEEE-EEecccC--CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccC
Confidence 4445554 44 55544 4555442 34566999999977665555554445555677999999988775 10
Q ss_pred -------CCchhHHh--------------cccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC
Q 004766 524 -------EYGEEWHK--------------GGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR 582 (732)
Q Consensus 524 -------~~g~~~~~--------------~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~ 582 (732)
.-+..-.. ..........+.-+.+++.++.+++. .+|+++|++.|+++++.++...
T Consensus 138 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~---~~ivlIg~G~gA~~~~~~la~~ 214 (310)
T PF12048_consen 138 TEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG---KNIVLIGHGTGAGWAARYLAEK 214 (310)
T ss_pred CCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC---ceEEEEEeChhHHHHHHHHhcC
Confidence 00000000 00011112345566677788877764 3599999999999999999986
Q ss_pred CC-eeeEEEEcCC
Q 004766 583 PD-LFGCALAHVG 594 (732)
Q Consensus 583 p~-~f~a~v~~~p 594 (732)
+. ...+.|+..|
T Consensus 215 ~~~~~daLV~I~a 227 (310)
T PF12048_consen 215 PPPMPDALVLINA 227 (310)
T ss_pred CCcccCeEEEEeC
Confidence 54 3567776555
No 434
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.56 E-value=6.5 Score=37.97 Aligned_cols=65 Identities=15% Similarity=0.049 Sum_probs=35.4
Q ss_pred CceeEEEEecC----CEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEeecccCCcEEEEEEec
Q 004766 350 DVLESATAVNL----NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFISFTS 414 (732)
Q Consensus 350 ~~l~~~~~~~~----~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~d~~~l~~~~ss 414 (732)
..+.+++|.+. ..-+++...++.--|+.-+.+.+....++--+ +..+..+++|..|+.|.++..+
T Consensus 208 dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~Gd 277 (299)
T KOG1332|consen 208 DWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGD 277 (299)
T ss_pred hhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCC
Confidence 45677777763 34566777776444444443222221111111 3445677888889877665543
No 435
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=93.33 E-value=8.4 Score=38.16 Aligned_cols=113 Identities=16% Similarity=0.156 Sum_probs=72.6
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce-ec-----cccc-ceeeeeEEEEe--CCcEEEEEEecCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV-EA-----DALS-WFKFSSIAWTH--DSKGFFYSRYPAPKEG 203 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~-~~-----~~~~-~~~~~~~~Wsp--Dg~~l~y~~~~~~~~~ 203 (732)
.+.-+.|-|++++||-..+ ..|.+|+++.+.. .. ...+ .-.+.+-+||| ||..++.+.
T Consensus 125 ~i~cvew~Pns~klasm~d------n~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~------- 191 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASMDD------NNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS------- 191 (370)
T ss_pred ceeeEEEcCCCCeeEEecc------CceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeC-------
Confidence 4677889999999997752 4788999987653 11 1111 12367789999 888888763
Q ss_pred CCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 204 KDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 204 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
...++.|++.|.... -.| +. .+.....++.+.|+-++++.+..+. ..|.++|...
T Consensus 192 -------------d~tl~~~D~RT~~~~-~sI-~d-AHgq~vrdlDfNpnkq~~lvt~gDd----gyvriWD~R~ 246 (370)
T KOG1007|consen 192 -------------DSTLQFWDLRTMKKN-NSI-ED-AHGQRVRDLDFNPNKQHILVTCGDD----GYVRIWDTRK 246 (370)
T ss_pred -------------CCcEEEEEccchhhh-cch-hh-hhcceeeeccCCCCceEEEEEcCCC----ccEEEEeccC
Confidence 234788887764321 111 11 1223355788999999988776543 3466778664
No 436
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=93.27 E-value=1.2 Score=44.24 Aligned_cols=130 Identities=8% Similarity=0.029 Sum_probs=82.6
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCc---cCCCCc-ChhHHHHHHhcCcEEEEEcccCCCCCch
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNI---SVTPSF-SVSRTILMRHLGAVFCIANIRGGGEYGE 527 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~---~~~~~~-~~~~~~~l~~~G~~v~~~~~rG~g~~g~ 527 (732)
++..+.+.-| .|++.++-- ++++.|++|..|.-.-. +....| .+.++.++. + |.+.-++.+|.-.--.
T Consensus 23 ~e~~V~T~~G--~v~V~V~Gd----~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-~-fcv~HV~~PGqe~gAp 94 (326)
T KOG2931|consen 23 QEHDVETAHG--VVHVTVYGD----PKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-H-FCVYHVDAPGQEDGAP 94 (326)
T ss_pred eeeeeccccc--cEEEEEecC----CCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh-h-eEEEecCCCccccCCc
Confidence 3444555557 566665532 23478889998874221 122233 345566666 5 9999999998643211
Q ss_pred hHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 528 EWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 528 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
.+.. ...-.+.+|+.+.+-.+.+. ..-+.|..+|--+|+++-++.|..+|++.-+.|+..+.
T Consensus 95 ~~p~----~y~yPsmd~LAd~l~~VL~~--f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 95 SFPE----GYPYPSMDDLADMLPEVLDH--FGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCD 156 (326)
T ss_pred cCCC----CCCCCCHHHHHHHHHHHHHh--cCcceEEEecccccHHHHHHHHhcChhheeEEEEEecC
Confidence 1111 11123566666666655544 22357999999999999999999999999999887653
No 437
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=93.24 E-value=17 Score=40.70 Aligned_cols=223 Identities=13% Similarity=0.077 Sum_probs=116.0
Q ss_pred CceEEEEEEECCCCceecccccc--eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCC
Q 004766 155 SDWATIKLMRIEDQIVEADALSW--FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSED 232 (732)
Q Consensus 155 ~e~~~i~v~dl~~g~~~~~~~~~--~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~ 232 (732)
+...+|.+||..+|..+.....+ .....+.+.--+..++-.+ ...++.+|+..+++..
T Consensus 225 s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS-------------------~D~t~rvWd~~sg~C~- 284 (537)
T KOG0274|consen 225 SDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGS-------------------TDKTERVWDCSTGECT- 284 (537)
T ss_pred CCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEe-------------------cCCcEEeEecCCCcEE-
Confidence 44468999999998855331211 1224555543233333332 2346888998887643
Q ss_pred eEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEec
Q 004766 233 ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIAND 312 (732)
Q Consensus 233 ~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~d 312 (732)
.++.... .- .-..+-++..+ ... +....|.+++++++. ...+..+....+....-+
T Consensus 285 -~~l~gh~--st--v~~~~~~~~~~-~sg----s~D~tVkVW~v~n~~--------------~l~l~~~h~~~V~~v~~~ 340 (537)
T KOG0274|consen 285 -HSLQGHT--SS--VRCLTIDPFLL-VSG----SRDNTVKVWDVTNGA--------------CLNLLRGHTGPVNCVQLD 340 (537)
T ss_pred -EEecCCC--ce--EEEEEccCceE-eec----cCCceEEEEeccCcc--------------eEEEeccccccEEEEEec
Confidence 2332211 11 12223333332 221 123568888887643 223333222233334445
Q ss_pred CCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCC-ceeeeccc
Q 004766 313 DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNG-SLLHQLPI 391 (732)
Q Consensus 313 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g-~~~~~l~~ 391 (732)
+..++..+.+ +.|-.+++.+++..+.+..|. ..+..+.+.. ...++...-+ ..|.+||+.++ +.+..+..
T Consensus 341 ~~~lvsgs~d----~~v~VW~~~~~~cl~sl~gH~--~~V~sl~~~~-~~~~~Sgs~D--~~IkvWdl~~~~~c~~tl~~ 411 (537)
T KOG0274|consen 341 EPLLVSGSYD----GTVKVWDPRTGKCLKSLSGHT--GRVYSLIVDS-ENRLLSGSLD--TTIKVWDLRTKRKCIHTLQG 411 (537)
T ss_pred CCEEEEEecC----ceEEEEEhhhceeeeeecCCc--ceEEEEEecC-cceEEeeeec--cceEeecCCchhhhhhhhcC
Confidence 6655544332 357777877777667777665 4566665443 2556666666 57999999866 44445554
Q ss_pred ccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEE
Q 004766 392 EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFR 437 (732)
Q Consensus 392 ~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~ 437 (732)
+...++.+. ..++ ++++. + -.+++..+|..+++ ....+.
T Consensus 412 h~~~v~~l~--~~~~-~Lvs~-~--aD~~Ik~WD~~~~~-~~~~~~ 450 (537)
T KOG0274|consen 412 HTSLVSSLL--LRDN-FLVSS-S--ADGTIKLWDAEEGE-CLRTLE 450 (537)
T ss_pred Ccccccccc--cccc-eeEec-c--ccccEEEeecccCc-eeeeec
Confidence 444444333 2333 23222 2 23478888888775 244443
No 438
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=93.22 E-value=0.41 Score=51.55 Aligned_cols=141 Identities=15% Similarity=0.077 Sum_probs=86.9
Q ss_pred EEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhH----------------HHHHHhcCcEEEEE
Q 004766 454 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSR----------------TILMRHLGAVFCIA 517 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~----------------~~~l~~~G~~v~~~ 517 (732)
+.+.-..| ..+..|++--.. .....|+||++-||||-+...++..+. -.| . +=..++..
T Consensus 49 v~v~~~~~-~~LFYwf~eS~~--~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySW-n-k~aNiLfL 123 (454)
T KOG1282|consen 49 VTVNESEG-RQLFYWFFESEN--NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSW-N-KEANILFL 123 (454)
T ss_pred EECCCCCC-ceEEEEEEEccC--CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccc-c-ccccEEEE
Confidence 44443467 788888876553 235689999999999976432221111 011 1 22345666
Q ss_pred cccCCCCCchhHHhcccccCCccHHHHHHHH-HHHHHHcCCCCCCcEEEEecChhHHHHHHHHh----hCC------Cee
Q 004766 518 NIRGGGEYGEEWHKGGALAKKQNCFDDFISA-SEYLISAGYTQSRKLCIEGGSNGGLLVGACIN----QRP------DLF 586 (732)
Q Consensus 518 ~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~----~~p------~~f 586 (732)
|.+-|.||...-...........+.+|+..+ .+|+.+...--.+.+.|.|-|++|..+-+++. .+. --+
T Consensus 124 d~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNL 203 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINL 203 (454)
T ss_pred ecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccc
Confidence 7776666644322222223344455666655 55777765555678999999999976555544 321 258
Q ss_pred eEEEEcCCccccc
Q 004766 587 GCALAHVGVMDML 599 (732)
Q Consensus 587 ~a~v~~~p~~d~~ 599 (732)
++.+.+.|++|..
T Consensus 204 kG~~IGNg~td~~ 216 (454)
T KOG1282|consen 204 KGYAIGNGLTDPE 216 (454)
T ss_pred eEEEecCcccCcc
Confidence 9999999998864
No 439
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=93.14 E-value=0.11 Score=50.79 Aligned_cols=22 Identities=32% Similarity=0.466 Sum_probs=18.5
Q ss_pred CCcEEEEecChhHHHHHHHHhh
Q 004766 560 SRKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~ 581 (732)
..+|.++|||+||+++-.++..
T Consensus 77 ~~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred cccceEEEecccHHHHHHHHHH
Confidence 3689999999999998777763
No 440
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=93.08 E-value=10 Score=37.82 Aligned_cols=155 Identities=15% Similarity=0.156 Sum_probs=79.7
Q ss_pred eEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceE-EEEEecCCeEEEEeCC
Q 004766 244 YIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNK 322 (732)
Q Consensus 244 ~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~ 322 (732)
.+....|-..|++++-.+++.. --++|+++++ .+..|+ +.+.+. .+-.+-.++|.+.+.+
T Consensus 274 vV~a~dWL~gg~Q~vTaSWDRT-----AnlwDVEtge-------------~v~~Lt-GHd~ELtHcstHptQrLVvTsSr 334 (481)
T KOG0300|consen 274 VVSACDWLAGGQQMVTASWDRT-----ANLWDVETGE-------------VVNILT-GHDSELTHCSTHPTQRLVVTSSR 334 (481)
T ss_pred ceEehhhhcCcceeeeeecccc-----ceeeeeccCc-------------eecccc-CcchhccccccCCcceEEEEecc
Confidence 3344557778888877776554 2355777753 122333 333333 2333446788887777
Q ss_pred CCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCc-eeeecccccceeeEeec
Q 004766 323 DAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGS-LLHQLPIEIGSVNAISA 401 (732)
Q Consensus 323 ~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~-~~~~l~~~~g~v~~~~~ 401 (732)
+. .|+||-+. ..-.-..++..- ...+.++.+..|++ +++..++ ..+.+||+.+-. .+..|.. ...+..+..
T Consensus 335 Dt-TFRLWDFR--eaI~sV~VFQGH-tdtVTS~vF~~dd~-vVSgSDD--rTvKvWdLrNMRsplATIRt-dS~~NRvav 406 (481)
T KOG0300|consen 335 DT-TFRLWDFR--EAIQSVAVFQGH-TDTVTSVVFNTDDR-VVSGSDD--RTVKVWDLRNMRSPLATIRT-DSPANRVAV 406 (481)
T ss_pred Cc-eeEeccch--hhcceeeeeccc-ccceeEEEEecCCc-eeecCCC--ceEEEeeeccccCcceeeec-CCccceeEe
Confidence 54 56776543 211113344332 24566666666344 5566666 478999987322 1122221 122333344
Q ss_pred ccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 402 RREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 402 s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+..++.+.+ +-...++..+|+.+.
T Consensus 407 s~g~~iIAi----PhDNRqvRlfDlnG~ 430 (481)
T KOG0300|consen 407 SKGHPIIAI----PHDNRQVRLFDLNGN 430 (481)
T ss_pred ecCCceEEe----ccCCceEEEEecCCC
Confidence 444444432 223356777777654
No 441
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=93.02 E-value=3.7 Score=39.51 Aligned_cols=73 Identities=19% Similarity=0.192 Sum_probs=48.0
Q ss_pred EEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEec-cCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceee
Q 004766 309 IANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVI-PEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLH 387 (732)
Q Consensus 309 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~-~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~ 387 (732)
..|..+.+++.. ....+|.+|+++++ ++..+ .|. ..+..+..-..+.-+++..+|| .+++||..+++.+.
T Consensus 122 ldP~enSi~~Ag----GD~~~y~~dlE~G~-i~r~~rGHt--DYvH~vv~R~~~~qilsG~EDG--tvRvWd~kt~k~v~ 192 (325)
T KOG0649|consen 122 LDPSENSILFAG----GDGVIYQVDLEDGR-IQREYRGHT--DYVHSVVGRNANGQILSGAEDG--TVRVWDTKTQKHVS 192 (325)
T ss_pred eccCCCcEEEec----CCeEEEEEEecCCE-EEEEEcCCc--ceeeeeeecccCcceeecCCCc--cEEEEeccccceeE
Confidence 456666777643 35689999999997 44444 343 4555555422244567777885 67889998888655
Q ss_pred ecc
Q 004766 388 QLP 390 (732)
Q Consensus 388 ~l~ 390 (732)
.|.
T Consensus 193 ~ie 195 (325)
T KOG0649|consen 193 MIE 195 (325)
T ss_pred Eec
Confidence 554
No 442
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=93.00 E-value=10 Score=37.55 Aligned_cols=151 Identities=12% Similarity=0.107 Sum_probs=79.4
Q ss_pred eeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCC-CCeEEEecCCC-CeeEEEeEEec--CC
Q 004766 179 KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS-EDILCWKDPEH-PKYIFSGHVTE--DG 254 (732)
Q Consensus 179 ~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-~~~~v~~~~~~-~~~~~~~~~Sp--Dg 254 (732)
+...+.|-|+++.++-... ..|.+|++..+.. ...+...+..+ ..-+.+..||| ||
T Consensus 125 ~i~cvew~Pns~klasm~d--------------------n~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdg 184 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASMDD--------------------NNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDG 184 (370)
T ss_pred ceeeEEEcCCCCeeEEecc--------------------CceEEEEcccCcchheeecccccccccceecccccCCCCcc
Confidence 3478999999999987642 2477888876544 22222211111 12345788999 89
Q ss_pred cEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeC
Q 004766 255 QYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDL 334 (732)
Q Consensus 255 ~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~ 334 (732)
..++.... ..++.+|+.+..+.. .+. +. -..++.. . -+.|+-+++++...+ .+.|-.+|.
T Consensus 185 nqv~tt~d------~tl~~~D~RT~~~~~-sI~--dA---Hgq~vrd----l-DfNpnkq~~lvt~gD---dgyvriWD~ 244 (370)
T KOG1007|consen 185 NQVATTSD------STLQFWDLRTMKKNN-SIE--DA---HGQRVRD----L-DFNPNKQHILVTCGD---DGYVRIWDT 244 (370)
T ss_pred ceEEEeCC------CcEEEEEccchhhhc-chh--hh---hcceeee----c-cCCCCceEEEEEcCC---CccEEEEec
Confidence 98875542 337778877632110 000 00 0001111 1 255665555544433 345777787
Q ss_pred CCCC-CceEeccCCCCCceeEEEEec-CCEEEEEEecCC
Q 004766 335 KEPN-DWFEVIPEAERDVLESATAVN-LNQMIVSYLSDV 371 (732)
Q Consensus 335 ~~~~-~~~~l~~~~~~~~l~~~~~~~-~~~l~~~~~~~g 371 (732)
...+ ..+++-++. ..+-.+.+.+ -+.|+++...|.
T Consensus 245 R~tk~pv~el~~Hs--HWvW~VRfn~~hdqLiLs~~SDs 281 (370)
T KOG1007|consen 245 RKTKFPVQELPGHS--HWVWAVRFNPEHDQLILSGGSDS 281 (370)
T ss_pred cCCCccccccCCCc--eEEEEEEecCccceEEEecCCCc
Confidence 6554 234444443 4444455443 256777776664
No 443
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=92.86 E-value=0.43 Score=52.48 Aligned_cols=114 Identities=18% Similarity=0.176 Sum_probs=64.9
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
--|..+.++++..+||- |....+|++|||+.+..+. .+-...+...+.|.|=+.+++-.+
T Consensus 71 spIeSl~f~~~E~Llaa-----gsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gS-------------- 131 (825)
T KOG0267|consen 71 SPIESLTFDTSERLLAA-----GSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGS-------------- 131 (825)
T ss_pred CcceeeecCcchhhhcc-----cccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEecccc--------------
Confidence 34678899999998883 4444689999999887443 111111235677999776552221
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
....+..|++--.. +++....+......+.+||||+|++-... .+.+-++|+..
T Consensus 132 -----tdtd~~iwD~Rk~G----c~~~~~s~~~vv~~l~lsP~Gr~v~~g~e-----d~tvki~d~~a 185 (825)
T KOG0267|consen 132 -----TDTDLKIWDIRKKG----CSHTYKSHTRVVDVLRLSPDGRWVASGGE-----DNTVKIWDLTA 185 (825)
T ss_pred -----ccccceehhhhccC----ceeeecCCcceeEEEeecCCCceeeccCC-----cceeeeecccc
Confidence 11223334432111 22221223434456789999999865432 23466667654
No 444
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=92.51 E-value=18 Score=39.03 Aligned_cols=100 Identities=11% Similarity=0.051 Sum_probs=55.5
Q ss_pred cCCeEEEEeCCCCCCceEEEEeCCCCC-CceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecc
Q 004766 312 DDTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP 390 (732)
Q Consensus 312 dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~ 390 (732)
.++.+|+.+. ...|+.+|+++++ .|+.-+.. ...+...+ +.+|+.... .+|+.+|..+|+.+-...
T Consensus 255 ~~~~vy~~~~----~g~l~ald~~tG~~~W~~~~~~-----~~~~~~~~-~~vy~~~~~---g~l~ald~~tG~~~W~~~ 321 (394)
T PRK11138 255 VGGVVYALAY----NGNLVALDLRSGQIVWKREYGS-----VNDFAVDG-GRIYLVDQN---DRVYALDTRGGVELWSQS 321 (394)
T ss_pred ECCEEEEEEc----CCeEEEEECCCCCEEEeecCCC-----ccCcEEEC-CEEEEEcCC---CeEEEEECCCCcEEEccc
Confidence 3567777553 2479999998886 24422211 12233333 777776533 479999998887532222
Q ss_pred c-ccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 391 I-EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 391 ~-~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
. .......... .++.+++.-. -..++.+|..+|+
T Consensus 322 ~~~~~~~~sp~v--~~g~l~v~~~----~G~l~~ld~~tG~ 356 (394)
T PRK11138 322 DLLHRLLTAPVL--YNGYLVVGDS----EGYLHWINREDGR 356 (394)
T ss_pred ccCCCcccCCEE--ECCEEEEEeC----CCEEEEEECCCCC
Confidence 1 1111111111 2455655422 3579999999985
No 445
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=92.51 E-value=4.5 Score=38.93 Aligned_cols=72 Identities=17% Similarity=0.158 Sum_probs=44.5
Q ss_pred eeEEEEecC-CEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 352 LESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 352 l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
|..+.+.+. +.+++.. |...+|.||+++|+..+.+..+..-+..+.......+++ |-..-+++..+|..+++
T Consensus 117 INam~ldP~enSi~~Ag---GD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qil----sG~EDGtvRvWd~kt~k 189 (325)
T KOG0649|consen 117 INAMWLDPSENSILFAG---GDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQIL----SGAEDGTVRVWDTKTQK 189 (325)
T ss_pred cceeEeccCCCcEEEec---CCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCccee----ecCCCccEEEEeccccc
Confidence 455666653 5566655 447899999999998666665544444444322233343 22344678888988886
No 446
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.36 E-value=2 Score=41.68 Aligned_cols=116 Identities=13% Similarity=0.094 Sum_probs=61.2
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHH-HhcC--cEEEEEcccCCCCCchhHHhcccc-cCC
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILM-RHLG--AVFCIANIRGGGEYGEEWHKGGAL-AKK 538 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l-~~~G--~~v~~~~~rG~g~~g~~~~~~~~~-~~~ 538 (732)
..+....+.|--.+.....|+++++-|.||. .+|-..+..-| .+.+ .-+..+-.-|.-.....-.++... ...
T Consensus 11 l~~si~~~~~~v~~~~~~~~li~~IpGNPG~---~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~e 87 (301)
T KOG3975|consen 11 LPTSILTLKPWVTKSGEDKPLIVWIPGNPGL---LGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEE 87 (301)
T ss_pred CcccceeeeeeeccCCCCceEEEEecCCCCc---hhHHHHHHHHHHHhcccccceeEEeccccccCCccccccccccccc
Confidence 4444444444433345778999999998885 35555543222 2223 113222222322222111111111 112
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhh
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 581 (732)
.-.++|.+.---..+++-...-.||.++|||-|.||++.++-.
T Consensus 88 ifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~ 130 (301)
T KOG3975|consen 88 IFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPS 130 (301)
T ss_pred ccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhh
Confidence 2345555544223334444455799999999999999998874
No 447
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.07 E-value=0.47 Score=47.21 Aligned_cols=85 Identities=15% Similarity=0.008 Sum_probs=53.4
Q ss_pred cEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCC
Q 004766 482 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSR 561 (732)
Q Consensus 482 P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 561 (732)
|.|+.+|++.|. .+.|.+ +...+. .-..|+....+|-+. ......+++|..++.-..+.+- -.-.
T Consensus 1 ~pLF~fhp~~G~--~~~~~~-L~~~l~-~~~~v~~l~a~g~~~----------~~~~~~~l~~~a~~yv~~Ir~~-QP~G 65 (257)
T COG3319 1 PPLFCFHPAGGS--VLAYAP-LAAALG-PLLPVYGLQAPGYGA----------GEQPFASLDDMAAAYVAAIRRV-QPEG 65 (257)
T ss_pred CCEEEEcCCCCc--HHHHHH-HHHHhc-cCceeeccccCcccc----------cccccCCHHHHHHHHHHHHHHh-CCCC
Confidence 578899998775 344543 234555 347788888887543 1223345566665433222221 1124
Q ss_pred cEEEEecChhHHHHHHHHhh
Q 004766 562 KLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 562 ~i~i~G~S~GG~l~~~~~~~ 581 (732)
-..+.|+|+||.++..++.+
T Consensus 66 Py~L~G~S~GG~vA~evA~q 85 (257)
T COG3319 66 PYVLLGWSLGGAVAFEVAAQ 85 (257)
T ss_pred CEEEEeeccccHHHHHHHHH
Confidence 69999999999999988875
No 448
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=91.97 E-value=0.63 Score=58.96 Aligned_cols=99 Identities=12% Similarity=-0.027 Sum_probs=62.8
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
.|.++++||..+.. ..|. .+...|. .++.|+.++.+|.+.. .....+++++.+.+...+..-. ..
T Consensus 1068 ~~~l~~lh~~~g~~--~~~~-~l~~~l~-~~~~v~~~~~~g~~~~----------~~~~~~l~~la~~~~~~i~~~~-~~ 1132 (1296)
T PRK10252 1068 GPTLFCFHPASGFA--WQFS-VLSRYLD-PQWSIYGIQSPRPDGP----------MQTATSLDEVCEAHLATLLEQQ-PH 1132 (1296)
T ss_pred CCCeEEecCCCCch--HHHH-HHHHhcC-CCCcEEEEECCCCCCC----------CCCCCCHHHHHHHHHHHHHhhC-CC
Confidence 46789999987753 2333 2345565 6899999999986531 1122345555544333333211 12
Q ss_pred CcEEEEecChhHHHHHHHHhh---CCCeeeEEEEcCC
Q 004766 561 RKLCIEGGSNGGLLVGACINQ---RPDLFGCALAHVG 594 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~---~p~~f~a~v~~~p 594 (732)
.+..+.|+|+||.++..++.+ +++....+++..+
T Consensus 1133 ~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 479999999999999988874 5777777665443
No 449
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=91.81 E-value=20 Score=38.21 Aligned_cols=92 Identities=15% Similarity=0.230 Sum_probs=49.4
Q ss_pred ceEEEEeCCCCC-CceEeccCCCC-C-------ceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceee
Q 004766 327 YKIIRVDLKEPN-DWFEVIPEAER-D-------VLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVN 397 (732)
Q Consensus 327 ~~l~~~d~~~~~-~~~~l~~~~~~-~-------~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~ 397 (732)
.+++.+|+++++ .|+.-+..... . ......+.+ +.+|+... + ..++.+|.++|+.+-..... ...
T Consensus 200 g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~-~~vy~~~~-~--g~l~a~d~~tG~~~W~~~~~--~~~ 273 (377)
T TIGR03300 200 GKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDG-GQVYAVSY-Q--GRVAALDLRSGRVLWKRDAS--SYQ 273 (377)
T ss_pred CEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEEC-CEEEEEEc-C--CEEEEEECCCCcEEEeeccC--Ccc
Confidence 479999988775 24322211100 0 011222333 66666543 3 36999999888764333321 111
Q ss_pred EeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 398 AISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 398 ~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
. +..+++.+++.. .-..++.+|..+|+
T Consensus 274 ~--p~~~~~~vyv~~----~~G~l~~~d~~tG~ 300 (377)
T TIGR03300 274 G--PAVDDNRLYVTD----ADGVVVALDRRSGS 300 (377)
T ss_pred C--ceEeCCEEEEEC----CCCeEEEEECCCCc
Confidence 1 123456666543 23689999998884
No 450
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=91.80 E-value=13 Score=41.36 Aligned_cols=67 Identities=10% Similarity=0.006 Sum_probs=41.9
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
...++-||+|+.|+-+..-. ......|++|..++=.....+ ..+.--+..+.|||||++|+-
T Consensus 528 v~~l~~s~~gnliASaCKS~--------------~~ehAvI~lw~t~~W~~~~~L----~~HsLTVT~l~FSpdg~~LLs 589 (764)
T KOG1063|consen 528 VYALAISPTGNLIASACKSS--------------LKEHAVIRLWNTANWLQVQEL----EGHSLTVTRLAFSPDGRYLLS 589 (764)
T ss_pred EEEEEecCCCCEEeehhhhC--------------CccceEEEEEeccchhhhhee----cccceEEEEEEECCCCcEEEE
Confidence 45678888888777654322 123446888887653322212 223444668999999999987
Q ss_pred EEecC
Q 004766 260 CIEEN 264 (732)
Q Consensus 260 ~~~~~ 264 (732)
.+.++
T Consensus 590 vsRDR 594 (764)
T KOG1063|consen 590 VSRDR 594 (764)
T ss_pred eecCc
Confidence 76543
No 451
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=91.74 E-value=1.9 Score=48.75 Aligned_cols=115 Identities=20% Similarity=0.217 Sum_probs=72.8
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC--Cceecc-cccc--eeeeeEEEEeCCcEEEEEEecCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED--QIVEAD-ALSW--FKFSSIAWTHDSKGFFYSRYPAPKEGK 204 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~--g~~~~~-~~~~--~~~~~~~WspDg~~l~y~~~~~~~~~~ 204 (732)
+.+.+.-.++||.++++|-.-+ + .+|.||.--+ +...+. .+.+ ....+++||+||..|+-.
T Consensus 204 Htf~~t~~~~spn~~~~Aa~d~-d----GrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSG--------- 269 (792)
T KOG1963|consen 204 HTFNITCVALSPNERYLAAGDS-D----GRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSG--------- 269 (792)
T ss_pred hcccceeEEeccccceEEEecc-C----CcEEEEeccccccccccceEEEecccccceeEEecCCceEeec---------
Confidence 3344667899999999986643 2 3577775322 221111 1111 135789999999887743
Q ss_pred CCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 205 DMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
++-..+.+|.++|+..+ ++ |.-...+..+.+|||+.+.++...+ +.|.++.+.+
T Consensus 270 ----------G~E~VLv~Wq~~T~~kq--fL---PRLgs~I~~i~vS~ds~~~sl~~~D-----NqI~li~~~d 323 (792)
T KOG1963|consen 270 ----------GREGVLVLWQLETGKKQ--FL---PRLGSPILHIVVSPDSDLYSLVLED-----NQIHLIKASD 323 (792)
T ss_pred ----------ccceEEEEEeecCCCcc--cc---cccCCeeEEEEEcCCCCeEEEEecC-----ceEEEEeccc
Confidence 34456889999998633 33 2222346689999999998777653 4466666543
No 452
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=91.68 E-value=16 Score=36.87 Aligned_cols=97 Identities=13% Similarity=0.131 Sum_probs=61.9
Q ss_pred ceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeE
Q 004766 156 DWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDIL 234 (732)
Q Consensus 156 e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~ 234 (732)
-...|+|+|+.+++....- ..+.....+.+-|+.-.|+.+.. ..+.|.+|++.+.. -+.
T Consensus 113 ~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~S------------------kD~svRlwnI~~~~--Cv~ 172 (385)
T KOG1034|consen 113 YLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSAS------------------KDHSVRLWNIQTDV--CVA 172 (385)
T ss_pred ceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEec------------------CCceEEEEeccCCe--EEE
Confidence 4579999999988754321 12223467888898877777642 34578999997653 235
Q ss_pred EEecCC-CCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCC
Q 004766 235 CWKDPE-HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS 277 (732)
Q Consensus 235 v~~~~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 277 (732)
||.+-. +..-+.++.||+||.+|+-...+. .|.++++.
T Consensus 173 VfGG~egHrdeVLSvD~~~~gd~i~ScGmDh-----slk~W~l~ 211 (385)
T KOG1034|consen 173 VFGGVEGHRDEVLSVDFSLDGDRIASCGMDH-----SLKLWRLN 211 (385)
T ss_pred EecccccccCcEEEEEEcCCCCeeeccCCcc-----eEEEEecC
Confidence 554322 233467999999999987554433 24455554
No 453
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=91.47 E-value=32 Score=39.73 Aligned_cols=242 Identities=10% Similarity=0.031 Sum_probs=129.6
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccccc-ceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALS-WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+.+++|.|.--+|+-+.. + ..|.+||-.=|..+....+ .....++.|.|+.- ||++
T Consensus 10 sRvKglsFHP~rPwILtslH-s----G~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qp-lFVS--------------- 68 (1202)
T KOG0292|consen 10 SRVKGLSFHPKRPWILTSLH-S----GVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQP-LFVS--------------- 68 (1202)
T ss_pred ccccceecCCCCCEEEEeec-C----ceeeeehhhhhhHHhhhhccCCccceeeecCCCC-eEEe---------------
Confidence 34668999999999987764 2 3788898776665432211 11247899999875 3333
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
.+...+|.+|+..+ ..++|....+..|+....|.+.=-||+-.+.+ ..|.+|+..++.
T Consensus 69 ---GGDDykIkVWnYk~----rrclftL~GHlDYVRt~~FHheyPWIlSASDD-----QTIrIWNwqsr~---------- 126 (1202)
T KOG0292|consen 69 ---GGDDYKIKVWNYKT----RRCLFTLLGHLDYVRTVFFHHEYPWILSASDD-----QTIRIWNWQSRK---------- 126 (1202)
T ss_pred ---cCCccEEEEEeccc----ceehhhhccccceeEEeeccCCCceEEEccCC-----CeEEEEeccCCc----------
Confidence 13345677777654 34677665566677788888888887655432 236666666532
Q ss_pred CCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-----C------------ceEecc-------
Q 004766 291 GLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-----D------------WFEVIP------- 345 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-----~------------~~~l~~------- 345 (732)
++..++......- ..|.|..+ +++....+. .+-++|+.+-. . -..|++
T Consensus 127 ---~iavltGHnHYVMcAqFhptED-lIVSaSLDQ---TVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK 199 (1202)
T KOG0292|consen 127 ---CIAVLTGHNHYVMCAQFHPTED-LIVSASLDQ---TVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVK 199 (1202)
T ss_pred ---eEEEEecCceEEEeeccCCccc-eEEEecccc---eEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeee
Confidence 2333333221111 12555433 444433332 35555654311 0 011222
Q ss_pred ---CCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeeccc---ccceeeEeecccCCcEEEEEEecCCCCc
Q 004766 346 ---EAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI---EIGSVNAISARREDSVVFISFTSFLIPG 419 (732)
Q Consensus 346 ---~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~---~~g~v~~~~~s~d~~~l~~~~ss~~~p~ 419 (732)
+..++-+..+++.+.--++++..+|-.-++|+|+- .+. -++.. +-+.|+++-+.|..+ +.++-+. -.
T Consensus 200 ~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmne--tKa-WEvDtcrgH~nnVssvlfhp~q~-lIlSnsE---Dk 272 (1202)
T KOG0292|consen 200 HVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE--TKA-WEVDTCRGHYNNVSSVLFHPHQD-LILSNSE---DK 272 (1202)
T ss_pred eeecccccccceEEecCCcceEEecCCcceeeEEEecc--ccc-eeehhhhcccCCcceEEecCccc-eeEecCC---Cc
Confidence 11123344445444345788888875556666653 222 23332 244566666777665 3333322 24
Q ss_pred eEEEEECCCCC
Q 004766 420 IVYQCNLKTET 430 (732)
Q Consensus 420 ~~y~~d~~~~~ 430 (732)
.+..||+...+
T Consensus 273 sirVwDm~kRt 283 (1202)
T KOG0292|consen 273 SIRVWDMTKRT 283 (1202)
T ss_pred cEEEEeccccc
Confidence 56677776543
No 454
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=91.39 E-value=9.3 Score=41.68 Aligned_cols=73 Identities=14% Similarity=0.138 Sum_probs=49.7
Q ss_pred CceeEEEEec-CCEEEEEEecCCeeEEEEEeCCCCceeeeccc--ccceeeEeecccCCcEEEEEEecCCCCceEEEEEC
Q 004766 350 DVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI--EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNL 426 (732)
Q Consensus 350 ~~l~~~~~~~-~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~--~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~ 426 (732)
..+..+.|.. +++|....-..+...+.+..+...+. +.++ -.|.+..+.+.|...+++++... .+..||+
T Consensus 522 k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~s--Q~PF~kskG~vq~v~FHPs~p~lfVaTq~-----~vRiYdL 594 (733)
T KOG0650|consen 522 KSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKS--QSPFRKSKGLVQRVKFHPSKPYLFVATQR-----SVRIYDL 594 (733)
T ss_pred CccceeeeecCCceEEEeccCCCcceEEEEecccccc--cCchhhcCCceeEEEecCCCceEEEEecc-----ceEEEeh
Confidence 3466788875 46676666666777888888864433 3444 26778788888888877765433 5778888
Q ss_pred CCC
Q 004766 427 KTE 429 (732)
Q Consensus 427 ~~~ 429 (732)
..+
T Consensus 595 ~kq 597 (733)
T KOG0650|consen 595 SKQ 597 (733)
T ss_pred hHH
Confidence 765
No 455
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=91.35 E-value=26 Score=38.59 Aligned_cols=218 Identities=14% Similarity=0.160 Sum_probs=117.8
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+.++.+.|-.-++.-+.- +| ++.||+-+|...+.. ...........|-+--.+|+..+++
T Consensus 15 RVKsVd~HPtePw~la~Ly-nG----~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD------------- 76 (794)
T KOG0276|consen 15 RVKSVDFHPTEPWILAALY-NG----DVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDD------------- 76 (794)
T ss_pred ceeeeecCCCCceEEEeee-cC----eeEEEecccceeeeeeeecccchhhheeeeccceEEEecCC-------------
Confidence 3568889999988876653 33 678888887664421 1111112445566666667665432
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
.+|.+++.+|.. .+..|+. ++.|+..++..|.--+++-.+ +.. .-++| +-+..
T Consensus 77 ------~~IrVfnynt~e--kV~~FeA--H~DyIR~iavHPt~P~vLtsS-DDm--~iKlW--~we~~------------ 129 (794)
T KOG0276|consen 77 ------MQIRVFNYNTGE--KVKTFEA--HSDYIRSIAVHPTLPYVLTSS-DDM--TIKLW--DWENE------------ 129 (794)
T ss_pred ------ceEEEEecccce--eeEEeec--cccceeeeeecCCCCeEEecC-Ccc--EEEEe--eccCc------------
Confidence 367888888763 4456654 456888899999888875443 222 34444 44431
Q ss_pred CCCcEEeeecccceE--EEEEe-cCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCE-EEEE
Q 004766 292 LLPFVKLIDGFDAQY--EVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQ-MIVS 366 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~--~~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~-l~~~ 366 (732)
..+ .....+...-+ ..|.| |.+.++- +..+. .+-++.+.++..-.+|-.|. .-+..+...+ +++ .+++
T Consensus 130 wa~-~qtfeGH~HyVMqv~fnPkD~ntFaS-~sLDr---TVKVWslgs~~~nfTl~gHe--kGVN~Vdyy~~gdkpylIs 202 (794)
T KOG0276|consen 130 WAC-EQTFEGHEHYVMQVAFNPKDPNTFAS-ASLDR---TVKVWSLGSPHPNFTLEGHE--KGVNCVDYYTGGDKPYLIS 202 (794)
T ss_pred eee-eeEEcCcceEEEEEEecCCCccceee-eeccc---cEEEEEcCCCCCceeeeccc--cCcceEEeccCCCcceEEe
Confidence 111 11222211111 13666 4444442 22222 34445555544334565555 3345555554 234 4445
Q ss_pred EecCCeeEEEEEeCCCCceeeecccccceeeEeecccC
Q 004766 367 YLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARRE 404 (732)
Q Consensus 367 ~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d 404 (732)
..+| ..+.+||.++...++.|..+...|+.+.+.|.
T Consensus 203 gaDD--~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~ 238 (794)
T KOG0276|consen 203 GADD--LTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPE 238 (794)
T ss_pred cCCC--ceEEEeecchHHHHHHhhcccccceEEEecCC
Confidence 5555 57899999877666677655444544444443
No 456
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=91.23 E-value=17 Score=36.16 Aligned_cols=117 Identities=12% Similarity=0.139 Sum_probs=61.7
Q ss_pred EEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC-CCCcEEeeecccceEEEEEecCCeEEEEeCCC
Q 004766 245 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG-LLPFVKLIDGFDAQYEVIANDDTVFTFLTNKD 323 (732)
Q Consensus 245 ~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~ 323 (732)
+.+++|+.+|+.++.+....+ .+.+.||...+-. .-+.++.. ..++.+| .|.+ +...++..-.
T Consensus 199 V~DIaf~~~s~~~FASvgaDG----SvRmFDLR~leHS-TIIYE~p~~~~pLlRL---------swnk--qDpnymATf~ 262 (364)
T KOG0290|consen 199 VYDIAFLKGSRDVFASVGADG----SVRMFDLRSLEHS-TIIYEDPSPSTPLLRL---------SWNK--QDPNYMATFA 262 (364)
T ss_pred eeEEEeccCccceEEEecCCC----cEEEEEecccccc-eEEecCCCCCCcceee---------ccCc--CCchHHhhhh
Confidence 468999999988876664332 3666677653200 00011000 0111111 1322 2222222212
Q ss_pred CCCceEEEEeCCCCC-CceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCC
Q 004766 324 APKYKIIRVDLKEPN-DWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLK 381 (732)
Q Consensus 324 ~~~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~ 381 (732)
....++..+|+.-+. ...+|-.|. ..+.++.|.+. ...+.+..+| .+..+||+.
T Consensus 263 ~dS~~V~iLDiR~P~tpva~L~~H~--a~VNgIaWaPhS~~hictaGDD--~qaliWDl~ 318 (364)
T KOG0290|consen 263 MDSNKVVILDIRVPCTPVARLRNHQ--ASVNGIAWAPHSSSHICTAGDD--CQALIWDLQ 318 (364)
T ss_pred cCCceEEEEEecCCCcceehhhcCc--ccccceEecCCCCceeeecCCc--ceEEEEecc
Confidence 224578888887765 233444443 67889999984 4456666666 577789986
No 457
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=91.16 E-value=16 Score=36.77 Aligned_cols=95 Identities=16% Similarity=0.140 Sum_probs=65.7
Q ss_pred CceEEEEeCCCCCC--ceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc--cceeeEeec
Q 004766 326 KYKIIRVDLKEPND--WFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISA 401 (732)
Q Consensus 326 ~~~l~~~d~~~~~~--~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~ 401 (732)
.++|-.+|+..... ...+-+|. ..|..+.+..++.++++.+..| .-|+++|..+|+.+.++... ...+..+++
T Consensus 158 ~GqvQi~dL~~~~~~~p~~I~AH~--s~Iacv~Ln~~Gt~vATaStkG-TLIRIFdt~~g~~l~E~RRG~d~A~iy~iaF 234 (346)
T KOG2111|consen 158 TGQVQIVDLASTKPNAPSIINAHD--SDIACVALNLQGTLVATASTKG-TLIRIFDTEDGTLLQELRRGVDRADIYCIAF 234 (346)
T ss_pred cceEEEEEhhhcCcCCceEEEccc--CceeEEEEcCCccEEEEeccCc-EEEEEEEcCCCcEeeeeecCCchheEEEEEe
Confidence 46788888866541 23343444 6688888887788999988887 56899999999887777543 456778899
Q ss_pred ccCCcEEEEEEecCCCCceEEEEECC
Q 004766 402 RREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 402 s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
|+++..+.++ |.. .++..+.+.
T Consensus 235 Sp~~s~Lavs--SdK--gTlHiF~l~ 256 (346)
T KOG2111|consen 235 SPNSSWLAVS--SDK--GTLHIFSLR 256 (346)
T ss_pred CCCccEEEEE--cCC--CeEEEEEee
Confidence 9998766543 433 445555443
No 458
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=91.01 E-value=0.9 Score=34.23 Aligned_cols=50 Identities=14% Similarity=0.150 Sum_probs=29.0
Q ss_pred CCceEEEEEEEccCCCeeEEEEEEEcCC--CCCCCCccEEEEEcCCCCccCCC
Q 004766 447 SEFHVHQVFVPSKDGSTKIPMFIVSKKN--IKLDGSHPCLLYGYGGFNISVTP 497 (732)
Q Consensus 447 ~~~~~~~~~~~s~dG~~~i~~~~~~p~~--~~~~~~~P~vv~~hG~~~~~~~~ 497 (732)
..|.+|...+++.|| .-+.++=+.++. ....++.|.|++.||-.+++..+
T Consensus 8 ~GY~~E~h~V~T~DG-YiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDG-YILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT---EEEEEE-TTS-EEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cCCCcEEEEEEeCCC-cEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 367889999999999 888887665554 23456789999999988876543
No 459
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=90.79 E-value=11 Score=41.49 Aligned_cols=112 Identities=13% Similarity=0.056 Sum_probs=58.4
Q ss_pred EEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEe
Q 004766 219 EFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKL 298 (732)
Q Consensus 219 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l 298 (732)
.|.+|+--+.... .-+-..++ .+..+..++||.+++-.++++. |.++|+... ++...+
T Consensus 194 ~lr~wDprt~~ki-mkLrGHTd---NVr~ll~~dDGt~~ls~sSDgt-----IrlWdLgqQ-------------rCl~T~ 251 (735)
T KOG0308|consen 194 DLRLWDPRTCKKI-MKLRGHTD---NVRVLLVNDDGTRLLSASSDGT-----IRLWDLGQQ-------------RCLATY 251 (735)
T ss_pred ceEEeccccccce-eeeecccc---ceEEEEEcCCCCeEeecCCCce-----EEeeecccc-------------ceeeeE
Confidence 4666776654321 11222222 3346778999999987665543 777787652 223333
Q ss_pred eecccceEEE-EEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEe
Q 004766 299 IDGFDAQYEV-IANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAV 358 (732)
Q Consensus 299 ~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~ 358 (732)
....+..+.. .+++=+++|+ ++....|++.|+.+....+.+..+ ++.+..+...
T Consensus 252 ~vH~e~VWaL~~~~sf~~vYs----G~rd~~i~~Tdl~n~~~~tlick~--daPv~~l~~~ 306 (735)
T KOG0308|consen 252 IVHKEGVWALQSSPSFTHVYS----GGRDGNIYRTDLRNPAKSTLICKE--DAPVLKLHLH 306 (735)
T ss_pred EeccCceEEEeeCCCcceEEe----cCCCCcEEecccCCchhheEeecC--CCchhhhhhc
Confidence 3333333331 2233345554 233457999999886533434333 2444444443
No 460
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.58 E-value=0.37 Score=52.99 Aligned_cols=73 Identities=11% Similarity=0.049 Sum_probs=53.7
Q ss_pred CeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 650 PSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 650 ~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
-.+|+.||..|..||+..+..+++++.+..... ...-..=++|.+.||.+|..+.+.....+.+..+.+|.++
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~--~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGA--LADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccc--cccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 589999999999999999999999998862100 0000123688899999998776533345777778888865
No 461
>PRK13614 lipoprotein LpqB; Provisional
Probab=90.48 E-value=25 Score=39.53 Aligned_cols=173 Identities=11% Similarity=0.047 Sum_probs=85.6
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
.+..+..|+||+.+|+.. +. ...+++... ++. ......+.....++|.++| ++..+. +.
T Consensus 344 ~~~s~avS~~g~~~A~~~---~~-~~~l~~~~~-g~~-~~~~~~g~~Lt~PS~d~~g-~vWtv~-~g------------- 402 (573)
T PRK13614 344 GPASPAESPVSQTVAFLN---GS-RTTLYTVSP-GQP-ARALTSGSTLTRPSFSPQD-WVWTAG-PG------------- 402 (573)
T ss_pred cccceeecCCCceEEEec---CC-CcEEEEecC-CCc-ceeeecCCCccCCcccCCC-CEEEee-CC-------------
Confidence 456789999999999982 22 246776654 222 2222222235778999888 565442 21
Q ss_pred cCCcccEEEEEEC-CCCCCC--CeEEEecCCC-CeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCc-cccc
Q 004766 213 DSNLYHEFYYHFL-GTKQSE--DILCWKDPEH-PKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGL-EGFK 287 (732)
Q Consensus 213 ~~~~~~~v~~~~l-gt~~~~--~~~v~~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~~ 287 (732)
.+..|.+..- +++... .+.....+.- ..-+..+.+|+||-++++....+. ...|++.-+.....+. ..+
T Consensus 403 ---~~~~vv~~~~~g~~~~~~~~~~~v~~~~l~g~~I~~lrvSrDG~R~Avi~~~~g--~~~V~va~V~R~~~G~P~~L- 476 (573)
T PRK13614 403 ---GNGRIVAYRPTGVAEGAQAPTVTLTADWLAGRTVKELRVSREGVRALVISEQNG--KSRVQVAGIVRNEDGTPREL- 476 (573)
T ss_pred ---CCceEEEEecCCCcccccccceeecccccCCCeeEEEEECCCccEEEEEEEeCC--ccEEEEEEEEeCCCCCeEEc-
Confidence 2224444332 222110 0001111111 123678999999999998875544 3446664332211110 000
Q ss_pred ccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC
Q 004766 288 KRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 338 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 338 (732)
.....+.......-..|.. +..|++++.....+..++.+.+..+.
T Consensus 477 -----~~~~~~~~~~~~~sl~W~~-~~sl~V~~~~~~~~~~~~~v~v~~g~ 521 (573)
T PRK13614 477 -----TAPITLAADSDADTGAWVG-DSTVVVTKASATSNVVPELLSVDAGQ 521 (573)
T ss_pred -----cCceecccCCCcceeEEcC-CCEEEEEeccCCCcceEEEEEeCCCC
Confidence 0011111111111124765 45677776554445567777775443
No 462
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.23 E-value=0.87 Score=46.74 Aligned_cols=111 Identities=14% Similarity=0.175 Sum_probs=64.8
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcC--cEEEEEcccCCC-CCchhHHhcccccCCccHHHHHHHHHHHHHHcC
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLG--AVFCIANIRGGG-EYGEEWHKGGALAKKQNCFDDFISASEYLISAG 556 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G--~~v~~~~~rG~g-~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 556 (732)
..-++|++||....-.+.-| ...+.....| ++.+++-.+-+| -+|..+-+ +.-..+-.++...+++|.+..
T Consensus 115 ~k~vlvFvHGfNntf~dav~--R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~Dr----eS~~~Sr~aLe~~lr~La~~~ 188 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVY--RTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDR----ESTNYSRPALERLLRYLATDK 188 (377)
T ss_pred CCeEEEEEcccCCchhHHHH--HHHHHHhhcCCCcceEEEEcCCCCeeeecccch----hhhhhhHHHHHHHHHHHHhCC
Confidence 34589999996432111112 1234444444 334444444332 22222211 111234578888899998875
Q ss_pred CCCCCcEEEEecChhHHHHHHHHhh----C----CCeeeEEEEcCCcccc
Q 004766 557 YTQSRKLCIEGGSNGGLLVGACINQ----R----PDLFGCALAHVGVMDM 598 (732)
Q Consensus 557 ~~d~~~i~i~G~S~GG~l~~~~~~~----~----p~~f~a~v~~~p~~d~ 598 (732)
- -.+|.|+.||||.++++.++.| . +..|+=+|..+|=.|.
T Consensus 189 ~--~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 189 P--VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred C--CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 4 3689999999999999987664 1 2246677777776654
No 463
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=90.15 E-value=3.5 Score=41.97 Aligned_cols=133 Identities=10% Similarity=-0.001 Sum_probs=69.9
Q ss_pred ccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcE
Q 004766 217 YHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFV 296 (732)
Q Consensus 217 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 296 (732)
...|+++|+-++..-..++..-. ...++|+| ..+.+..++. + ..+|+.|..... .|..
T Consensus 209 DrsIvLyD~R~~~Pl~KVi~~mR-----TN~IswnP-eafnF~~a~E-D---~nlY~~DmR~l~------------~p~~ 266 (433)
T KOG0268|consen 209 DRSIVLYDLRQASPLKKVILTMR-----TNTICWNP-EAFNFVAANE-D---HNLYTYDMRNLS------------RPLN 266 (433)
T ss_pred CCceEEEecccCCccceeeeecc-----ccceecCc-cccceeeccc-c---ccceehhhhhhc------------ccch
Confidence 34578888766544333343221 13689999 5555444432 2 448888865421 0111
Q ss_pred Eeeeccc-ceEE-EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeE
Q 004766 297 KLIDGFD-AQYE-VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYV 374 (732)
Q Consensus 297 ~l~~~~~-~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~ 374 (732)
+-.+.. +... .|||-|+.|+-.+-+ ...+||- ...+. -+.+.....-..+-.+.|+-|...+++.++++.-+
T Consensus 267 -v~~dhvsAV~dVdfsptG~EfvsgsyD--ksIRIf~--~~~~~-SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvR 340 (433)
T KOG0268|consen 267 -VHKDHVSAVMDVDFSPTGQEFVSGSYD--KSIRIFP--VNHGH-SRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVR 340 (433)
T ss_pred -hhcccceeEEEeccCCCcchhcccccc--ceEEEee--cCCCc-chhhhhHhhhheeeEEEEeccccEEEecCCCccee
Confidence 111111 1111 378999887643322 1334444 44443 13333323235566788888778888888886444
Q ss_pred EEE
Q 004766 375 LQI 377 (732)
Q Consensus 375 l~~ 377 (732)
||.
T Consensus 341 lWk 343 (433)
T KOG0268|consen 341 LWK 343 (433)
T ss_pred eee
Confidence 443
No 464
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=90.05 E-value=0.58 Score=41.96 Aligned_cols=38 Identities=24% Similarity=0.344 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhh
Q 004766 542 FDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 542 ~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 581 (732)
.+.+...++.+.++.- +.+|.+.|||.||.++..++..
T Consensus 47 ~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 4556666666665533 4799999999999998877764
No 465
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=90.03 E-value=0.62 Score=51.32 Aligned_cols=102 Identities=16% Similarity=0.121 Sum_probs=59.0
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccccc-ceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALS-WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
+.+.+...++||||++++ .|.|..++.|||+.-|+..++... .+....+.+.|-. .|.-.
T Consensus 153 ~~~vv~~l~lsP~Gr~v~-----~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e-~Lla~------------- 213 (825)
T KOG0267|consen 153 HTRVVDVLRLSPDGRWVA-----SGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLE-VLLAP------------- 213 (825)
T ss_pred CcceeEEEeecCCCceee-----ccCCcceeeeecccccccccccccccccccccccCchh-hhhcc-------------
Confidence 345577889999999988 445567999999998987765431 1222344444432 11110
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
......+.+|++.+-+ ++-....+..-+.+..|+|||+.++-
T Consensus 214 -----Gs~d~tv~f~dletfe----~I~s~~~~~~~v~~~~fn~~~~~~~~ 255 (825)
T KOG0267|consen 214 -----GSSDRTVRFWDLETFE----VISSGKPETDGVRSLAFNPDGKIVLS 255 (825)
T ss_pred -----CCCCceeeeeccceeE----EeeccCCccCCceeeeecCCceeeec
Confidence 1223456777766421 22222222223456788999987643
No 466
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=90.03 E-value=30 Score=37.10 Aligned_cols=92 Identities=8% Similarity=0.015 Sum_probs=56.3
Q ss_pred EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceee
Q 004766 308 VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLH 387 (732)
Q Consensus 308 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~ 387 (732)
.|.|.| .+++-+. .++.+++|.++.. .+.-+.++..|..+..++++..++..+.|+.--||+++.+ |....
T Consensus 414 ~fhpsg-~va~Gt~----~G~w~V~d~e~~~---lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~-g~~y~ 484 (626)
T KOG2106|consen 414 DFHPSG-VVAVGTA----TGRWFVLDTETQD---LVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSAN-GRKYS 484 (626)
T ss_pred eccCcc-eEEEeec----cceEEEEecccce---eEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCC-CcEEE
Confidence 477877 6665433 3578888987744 2222333577888999987777777788854445555543 54333
Q ss_pred eccccc-ceeeEeecccCCcEE
Q 004766 388 QLPIEI-GSVNAISARREDSVV 408 (732)
Q Consensus 388 ~l~~~~-g~v~~~~~s~d~~~l 408 (732)
++-... ..+..+++|.|++.+
T Consensus 485 r~~k~~gs~ithLDwS~Ds~~~ 506 (626)
T KOG2106|consen 485 RVGKCSGSPITHLDWSSDSQFL 506 (626)
T ss_pred EeeeecCceeEEeeecCCCceE
Confidence 332222 235567888888744
No 467
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=89.87 E-value=4.7 Score=44.34 Aligned_cols=189 Identities=11% Similarity=0.076 Sum_probs=93.5
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
...+++.|||+.|+... ..++++++...+.--. .+ ..+...+.-++||.||+..+-
T Consensus 15 i~d~afkPDGsqL~lAA--------------------g~rlliyD~ndG~llq-tL---KgHKDtVycVAys~dGkrFAS 70 (1081)
T KOG1538|consen 15 INDIAFKPDGTQLILAA--------------------GSRLLVYDTSDGTLLQ-PL---KGHKDTVYCVAYAKDGKRFAS 70 (1081)
T ss_pred hheeEECCCCceEEEec--------------------CCEEEEEeCCCccccc-cc---ccccceEEEEEEccCCceecc
Confidence 47899999999999874 2368888876553211 11 122234567999999998753
Q ss_pred EEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEE--EEEecCCeEEEEeCCCCCCceEEEEeCCCC
Q 004766 260 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYE--VIANDDTVFTFLTNKDAPKYKIIRVDLKEP 337 (732)
Q Consensus 260 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 337 (732)
.+.+ .-+.++...- .+. |.-.....+. .|.|-...|+-. .. ..+.+|..+-
T Consensus 71 G~aD-----K~VI~W~~kl--EG~--------------LkYSH~D~IQCMsFNP~~h~LasC-sL--sdFglWS~~q--- 123 (1081)
T KOG1538|consen 71 GSAD-----KSVIIWTSKL--EGI--------------LKYSHNDAIQCMSFNPITHQLASC-SL--SDFGLWSPEQ--- 123 (1081)
T ss_pred CCCc-----eeEEEecccc--cce--------------eeeccCCeeeEeecCchHHHhhhc-ch--hhccccChhh---
Confidence 3221 2344443211 010 1100001111 233322222211 11 1233443321
Q ss_pred CCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccc---eeeEeecccC---CcEEEEE
Q 004766 338 NDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIG---SVNAISARRE---DSVVFIS 411 (732)
Q Consensus 338 ~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g---~v~~~~~s~d---~~~l~~~ 411 (732)
+.+..+.....+.+.+|..|+.+++...-+| .|.+.+. +|+....|..|.| .+.++.++|. |..=.+.
T Consensus 124 ---K~V~K~kss~R~~~CsWtnDGqylalG~~nG--TIsiRNk-~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~a 197 (1081)
T KOG1538|consen 124 ---KSVSKHKSSSRIICCSWTNDGQYLALGMFNG--TISIRNK-NGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILA 197 (1081)
T ss_pred ---hhHHhhhhheeEEEeeecCCCcEEEEeccCc--eEEeecC-CCCcceEEeCCCCCCCCceEEEecCCCCCCccceEE
Confidence 1222333234567788998777777776665 5555554 4776556666532 3445554443 2222234
Q ss_pred EecCCCCceEEEEE
Q 004766 412 FTSFLIPGIVYQCN 425 (732)
Q Consensus 412 ~ss~~~p~~~y~~d 425 (732)
...+.+--..|.++
T Consensus 198 V~DW~qTLSFy~Ls 211 (1081)
T KOG1538|consen 198 VADWGQTLSFYQLS 211 (1081)
T ss_pred EEeccceeEEEEec
Confidence 44555544555443
No 468
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=89.68 E-value=31 Score=37.64 Aligned_cols=167 Identities=16% Similarity=0.188 Sum_probs=71.7
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
...+++||+|+.++.. + +..+.|+- ..... ....+ ...+++|+++++ +++..
T Consensus 35 p~~ls~npngr~v~V~---g-~geY~iyt--~~~~r--~k~~G--~g~~~vw~~~n~-yAv~~----------------- 86 (443)
T PF04053_consen 35 PQSLSHNPNGRFVLVC---G-DGEYEIYT--ALAWR--NKAFG--SGLSFVWSSRNR-YAVLE----------------- 86 (443)
T ss_dssp -SEEEE-TTSSEEEEE---E-TTEEEEEE--TTTTE--EEEEE--E-SEEEE-TSSE-EEEE------------------
T ss_pred CeeEEECCCCCEEEEE---c-CCEEEEEE--ccCCc--ccccC--ceeEEEEecCcc-EEEEE-----------------
Confidence 4578899999999883 2 22366654 11111 11111 126799999766 33331
Q ss_pred CCcccEEEEE-ECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 214 SNLYHEFYYH-FLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 214 ~~~~~~v~~~-~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
...+|..+ ++...... .+..+.. ...+ +. |..|..... ..|.++|.+++.
T Consensus 87 --~~~~I~I~kn~~~~~~k---~i~~~~~---~~~I-f~--G~LL~~~~~------~~i~~yDw~~~~------------ 137 (443)
T PF04053_consen 87 --SSSTIKIYKNFKNEVVK---SIKLPFS---VEKI-FG--GNLLGVKSS------DFICFYDWETGK------------ 137 (443)
T ss_dssp --TTS-EEEEETTEE-TT--------SS----EEEE-E---SSSEEEEET------TEEEEE-TTT--------------
T ss_pred --CCCeEEEEEcCccccce---EEcCCcc---cceE-Ec--CcEEEEECC------CCEEEEEhhHcc------------
Confidence 12234443 33211101 1111110 1111 11 776665532 238888988742
Q ss_pred CCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCC-------CC-CCceEeccCCCCCceeEEEEecCCEEE
Q 004766 293 LPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK-------EP-NDWFEVIPEAERDVLESATAVNLNQMI 364 (732)
Q Consensus 293 ~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~-------~~-~~~~~l~~~~~~~~l~~~~~~~~~~l~ 364 (732)
....+.-.......|+++|+.+.+++.. ..-|+..+++ .| +..-.++.+- ...+.+..|.. +.++
T Consensus 138 --~i~~i~v~~vk~V~Ws~~g~~val~t~~---~i~il~~~~~~~~~~~~~g~e~~f~~~~E~-~~~IkSg~W~~-d~fi 210 (443)
T PF04053_consen 138 --LIRRIDVSAVKYVIWSDDGELVALVTKD---SIYILKYNLEAVAAIPEEGVEDAFELIHEI-SERIKSGCWVE-DCFI 210 (443)
T ss_dssp --EEEEESS-E-EEEEE-TTSSEEEEE-S----SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE--S--SEEEEET-TEEE
T ss_pred --eeeEEecCCCcEEEEECCCCEEEEEeCC---eEEEEEecchhcccccccCchhceEEEEEe-cceeEEEEEEc-CEEE
Confidence 1111221112344699999999988753 3446666654 11 1122333331 25677888887 4333
No 469
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=89.66 E-value=29 Score=36.30 Aligned_cols=138 Identities=17% Similarity=0.134 Sum_probs=76.4
Q ss_pred EEEeEEECCCCcEEEEEEeccC---CceEEEEEEECCCCce-----ecccc-----------cceeeeeEEEEeCCcEEE
Q 004766 133 ALIKVSVSEDAKYLAYALSYSG---SDWATIKLMRIEDQIV-----EADAL-----------SWFKFSSIAWTHDSKGFF 193 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G---~e~~~i~v~dl~~g~~-----~~~~~-----------~~~~~~~~~WspDg~~l~ 193 (732)
...++++.+||.++ +++..+ .....|+.++.. |.. ++... .+..+-+++++|||++|+
T Consensus 86 D~Egi~~~~~g~~~--is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~ 162 (326)
T PF13449_consen 86 DPEGIAVPPDGSFW--ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLF 162 (326)
T ss_pred ChhHeEEecCCCEE--EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEE
Confidence 34567777888643 233332 112478888877 542 22211 122356899999999887
Q ss_pred EEEecCCCCCCCCCCCCcc--cCCcccEEEEEECCCC-CCCCeEEEecCC-----CCeeEEEeEEecCCcEEEEEEecCC
Q 004766 194 YSRYPAPKEGKDMDAGTET--DSNLYHEFYYHFLGTK-QSEDILCWKDPE-----HPKYIFSGHVTEDGQYLVMCIEENC 265 (732)
Q Consensus 194 y~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~lgt~-~~~~~~v~~~~~-----~~~~~~~~~~SpDg~~l~~~~~~~~ 265 (732)
........ .++... ......+|+.++..++ ......+|.... ...-...+.+-+|++.|++......
T Consensus 163 ~~~E~~l~-----~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~ 237 (326)
T PF13449_consen 163 AAMESPLK-----QDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSP 237 (326)
T ss_pred EEECcccc-----CCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCC
Confidence 77533211 011110 1233467777777652 233445665432 1223457788899998777654221
Q ss_pred --cceEEEEEEeCCC
Q 004766 266 --DPVNKVYYCDLSA 278 (732)
Q Consensus 266 --~~~~~l~~~d~~~ 278 (732)
....+||.+++..
T Consensus 238 ~~~~~~ri~~v~l~~ 252 (326)
T PF13449_consen 238 GTGNYKRIYRVDLSD 252 (326)
T ss_pred CccceEEEEEEEccc
Confidence 3367888888765
No 470
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=89.51 E-value=14 Score=36.97 Aligned_cols=59 Identities=15% Similarity=0.158 Sum_probs=35.0
Q ss_pred ceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecc
Q 004766 327 YKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP 390 (732)
Q Consensus 327 ~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~ 390 (732)
-.+-.+|+.+.. ..|..-.-+..+.-+.++.+..++..--++ .++.++|+. |..+.+++
T Consensus 378 rTvKvWdLrNMR--splATIRtdS~~NRvavs~g~~iIAiPhDN--RqvRlfDln-G~RlaRlP 436 (481)
T KOG0300|consen 378 RTVKVWDLRNMR--SPLATIRTDSPANRVAVSKGHPIIAIPHDN--RQVRLFDLN-GNRLARLP 436 (481)
T ss_pred ceEEEeeecccc--CcceeeecCCccceeEeecCCceEEeccCC--ceEEEEecC-CCccccCC
Confidence 356677877654 222221223456667777745565554444 579999996 77666665
No 471
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=89.51 E-value=41 Score=37.82 Aligned_cols=61 Identities=15% Similarity=0.098 Sum_probs=38.1
Q ss_pred CceEEEEeCCCCC-CceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc
Q 004766 326 KYKIIRVDLKEPN-DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE 392 (732)
Q Consensus 326 ~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~ 392 (732)
...|..+|+.+++ .|+. +.. .....+..... +.+++....+| .|+.+|.+||+.+-+..++
T Consensus 440 ~g~l~AiD~~tGk~~W~~--~~~-~p~~~~~l~t~-g~lvf~g~~~G--~l~a~D~~TGe~lw~~~~g 501 (527)
T TIGR03075 440 MGSLIAWDPITGKIVWEH--KED-FPLWGGVLATA-GDLVFYGTLEG--YFKAFDAKTGEELWKFKTG 501 (527)
T ss_pred ceeEEEEeCCCCceeeEe--cCC-CCCCCcceEEC-CcEEEEECCCC--eEEEEECCCCCEeEEEeCC
Confidence 4568999999886 3432 211 11233333344 45676665554 7999999999987666654
No 472
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=88.91 E-value=34 Score=36.10 Aligned_cols=98 Identities=13% Similarity=0.122 Sum_probs=59.2
Q ss_pred CCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCC-CCC
Q 004766 154 GSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK-QSE 231 (732)
Q Consensus 154 G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~-~~~ 231 (732)
|+...++.+||+++|++..... .+..+..+.|.|-.-.++.+. .+..+|.+.+.... ...
T Consensus 262 gsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsG------------------s~D~~V~l~D~R~~~~s~ 323 (463)
T KOG0270|consen 262 GSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSG------------------SYDGTVALKDCRDPSNSG 323 (463)
T ss_pred cCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEec------------------cccceEEeeeccCccccC
Confidence 4556899999999999643222 222458899999876666652 23445666665431 111
Q ss_pred CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 232 DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 232 ~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
...-+. +-+..+.|.|-....++++.+. ..||.+|+..
T Consensus 324 ~~wk~~-----g~VEkv~w~~~se~~f~~~tdd----G~v~~~D~R~ 361 (463)
T KOG0270|consen 324 KEWKFD-----GEVEKVAWDPHSENSFFVSTDD----GTVYYFDIRN 361 (463)
T ss_pred ceEEec-----cceEEEEecCCCceeEEEecCC----ceEEeeecCC
Confidence 111111 1234678888888777776433 3488888765
No 473
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=88.81 E-value=1.3 Score=46.56 Aligned_cols=97 Identities=12% Similarity=0.041 Sum_probs=56.2
Q ss_pred EEEEEcCCCCccCCCCcChhHHHHHHhcCcE---EEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCC
Q 004766 483 CLLYGYGGFNISVTPSFSVSRTILMRHLGAV---FCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 559 (732)
Q Consensus 483 ~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~---v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 559 (732)
.++++||.... ...|.+ +..++...|+. +..+.+.+...-+. ....-+-+.+-++...... -
T Consensus 61 pivlVhG~~~~--~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~----------~~~~~~ql~~~V~~~l~~~--g 125 (336)
T COG1075 61 PIVLVHGLGGG--YGNFLP-LDYRLAILGWLTNGVYAFELSGGDGTYS----------LAVRGEQLFAYVDEVLAKT--G 125 (336)
T ss_pred eEEEEccCcCC--cchhhh-hhhhhcchHHHhcccccccccccCCCcc----------ccccHHHHHHHHHHHHhhc--C
Confidence 68889996222 223332 23445556666 66666665411111 0111223333344433332 2
Q ss_pred CCcEEEEecChhHHHHHHHHhhCC--CeeeEEEEcCC
Q 004766 560 SRKLCIEGGSNGGLLVGACINQRP--DLFGCALAHVG 594 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~p--~~f~a~v~~~p 594 (732)
..++.+.|||+||.++..++...+ .+.+.++...+
T Consensus 126 a~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 126 AKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred CCceEEEeecccchhhHHHHhhcCccceEEEEEEecc
Confidence 379999999999999998888877 67777776544
No 474
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=88.07 E-value=11 Score=36.34 Aligned_cols=61 Identities=23% Similarity=0.293 Sum_probs=35.3
Q ss_pred EEeEEECCCCcEEEEEEeccCCc----eEEEEEEECCCCceec-ccccceeeeeEEEEeCCcEEEEEE
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSD----WATIKLMRIEDQIVEA-DALSWFKFSSIAWTHDSKGFFYSR 196 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e----~~~i~v~dl~~g~~~~-~~~~~~~~~~~~WspDg~~l~y~~ 196 (732)
+..-.++||||+.+=+....|.+ ...||.|-+ ++++-. -.--++ ..+++|+-|-|.+||+-
T Consensus 111 ~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~-~h~v~~i~~~v~I-sNgl~Wd~d~K~fY~iD 176 (310)
T KOG4499|consen 111 LNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLA-GHQVELIWNCVGI-SNGLAWDSDAKKFYYID 176 (310)
T ss_pred cccCccCCCCceeeeeeccccccccccccEEEEecc-CCCceeeehhccC-CccccccccCcEEEEEc
Confidence 44667899999965555444432 135665544 333111 000111 25799999999999973
No 475
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=87.93 E-value=0.86 Score=41.67 Aligned_cols=25 Identities=28% Similarity=0.307 Sum_probs=21.0
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCC
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRP 583 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p 583 (732)
...+|.+.|||+||.++..++.+..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 3579999999999999998877643
No 476
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=87.75 E-value=14 Score=41.13 Aligned_cols=116 Identities=12% Similarity=0.031 Sum_probs=68.6
Q ss_pred CCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccce---eeeeEEEEeCCcEEEEEEecCCCCCCC
Q 004766 129 DGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWF---KFSSIAWTHDSKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 129 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~---~~~~~~WspDg~~l~y~~~~~~~~~~~ 205 (732)
++..++..+.|....++|- ++|.+ .-|.||-+-.|....+-+.+- -..+.+|..||+.|.++-.++.-
T Consensus 69 GH~~sV~vvTWNe~~QKLT-tSDt~----GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGav---- 139 (1189)
T KOG2041|consen 69 GHNASVMVVTWNENNQKLT-TSDTS----GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAV---- 139 (1189)
T ss_pred cCcceEEEEEecccccccc-ccCCC----ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCE----
Confidence 4567888899998888774 33333 368888888777443322111 14789999999999988644310
Q ss_pred CCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
...+-.+.+||--++. ......+.||+|.+.++|.... .+..+.|-++
T Consensus 140 -----IVGsvdGNRIwgKeLk---------------g~~l~hv~ws~D~~~~Lf~~an-----ge~hlydnqg 187 (1189)
T KOG2041|consen 140 -----IVGSVDGNRIWGKELK---------------GQLLAHVLWSEDLEQALFKKAN-----GETHLYDNQG 187 (1189)
T ss_pred -----EEEeeccceecchhcc---------------hheccceeecccHHHHHhhhcC-----CcEEEecccc
Confidence 0001123344422221 1122467899999999886543 3355555443
No 477
>PHA03098 kelch-like protein; Provisional
Probab=87.57 E-value=43 Score=37.74 Aligned_cols=116 Identities=9% Similarity=0.013 Sum_probs=61.4
Q ss_pred CCeEEEEeCCCC---CCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC------eeEEEEEeCCCC
Q 004766 313 DTVFTFLTNKDA---PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV------KYVLQIRDLKNG 383 (732)
Q Consensus 313 g~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g------~~~l~~~d~~~g 383 (732)
++.+|++..... ....++++|+.+.. |+.+.+-.....-......+ +.+|+....+. ...++++|+.++
T Consensus 389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 466 (534)
T PHA03098 389 NNLIYVIGGISKNDELLKTVECFSLNTNK-WSKGSPLPISHYGGCAIYHD-GKIYVIGGISYIDNIKVYNIVESYNPVTN 466 (534)
T ss_pred CCEEEEECCcCCCCcccceEEEEeCCCCe-eeecCCCCccccCceEEEEC-CEEEEECCccCCCCCcccceEEEecCCCC
Confidence 567888765321 12468899988776 87664422111112223333 78877764322 235899999876
Q ss_pred ceeeecc-c--ccceeeEeecccCCcEEEEEEecCCC---CceEEEEECCCCCCceEEEE
Q 004766 384 SLLHQLP-I--EIGSVNAISARREDSVVFISFTSFLI---PGIVYQCNLKTETPEMKIFR 437 (732)
Q Consensus 384 ~~~~~l~-~--~~g~v~~~~~s~d~~~l~~~~ss~~~---p~~~y~~d~~~~~~~~~~l~ 437 (732)
+. ..+. . +........ .+ +.+++ +.+... -..++.||+.+.+ ++.+.
T Consensus 467 ~W-~~~~~~~~~r~~~~~~~--~~-~~iyv-~GG~~~~~~~~~v~~yd~~~~~--W~~~~ 519 (534)
T PHA03098 467 KW-TELSSLNFPRINASLCI--FN-NKIYV-VGGDKYEYYINEIEVYDDKTNT--WTLFC 519 (534)
T ss_pred ce-eeCCCCCcccccceEEE--EC-CEEEE-EcCCcCCcccceeEEEeCCCCE--EEecC
Confidence 64 4443 1 211111111 23 34543 333221 3578999988773 55443
No 478
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=87.18 E-value=32 Score=33.88 Aligned_cols=149 Identities=9% Similarity=0.054 Sum_probs=76.9
Q ss_pred EEEEEEECCCCceec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEE
Q 004766 158 ATIKLMRIEDQIVEA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCW 236 (732)
Q Consensus 158 ~~i~v~dl~~g~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~ 236 (732)
.++.+++++.+.... .........+.+.|||+++...+. ...+|+++.+.....-.+-++
T Consensus 138 ht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vg-------------------ds~~Vf~y~id~~sey~~~~~ 198 (344)
T KOG4532|consen 138 HTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVG-------------------DSRRVFRYAIDDESEYIENIY 198 (344)
T ss_pred cceeEEEEecCcccceeeccccceeeeEEcCCCceEEEec-------------------CCCcceEEEeCCccceeeeeE
Confidence 467777776554111 111111236788999999888762 344688888875543333334
Q ss_pred ecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee---cccc--eEEEEEe
Q 004766 237 KDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID---GFDA--QYEVIAN 311 (732)
Q Consensus 237 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~--~~~~~s~ 311 (732)
+.+..+.- ...+||......+....++. +.++|+..-. .+...... ...+ ....|++
T Consensus 199 ~a~t~D~g-F~~S~s~~~~~FAv~~Qdg~-----~~I~DVR~~~------------tpm~~~sstrp~hnGa~R~c~Fsl 260 (344)
T KOG4532|consen 199 EAPTSDHG-FYNSFSENDLQFAVVFQDGT-----CAIYDVRNMA------------TPMAEISSTRPHHNGAFRVCRFSL 260 (344)
T ss_pred ecccCCCc-eeeeeccCcceEEEEecCCc-----EEEEEecccc------------cchhhhcccCCCCCCceEEEEecC
Confidence 33322211 24677777766666554433 5566654421 11111111 1111 1234776
Q ss_pred cC-CeEEEEeCCCCCCceEEEEeCCCCCCceEeccC
Q 004766 312 DD-TVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPE 346 (732)
Q Consensus 312 dg-~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~ 346 (732)
.| ..|+|.+.. ...+-++|+.+....+.+++.
T Consensus 261 ~g~lDLLf~sEh---fs~~hv~D~R~~~~~q~I~i~ 293 (344)
T KOG4532|consen 261 YGLLDLLFISEH---FSRVHVVDTRNYVNHQVIVIP 293 (344)
T ss_pred CCcceEEEEecC---cceEEEEEcccCceeeEEecC
Confidence 54 356666653 346888898887644444443
No 479
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=86.66 E-value=1.1 Score=48.16 Aligned_cols=87 Identities=15% Similarity=0.163 Sum_probs=51.4
Q ss_pred CcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHH
Q 004766 498 SFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGA 577 (732)
Q Consensus 498 ~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 577 (732)
.|.. +...|.+.||..-. +++| .+.+|+.+.. .....+..+...|+.+.+.. ..+|.|+||||||+++..
T Consensus 66 ~~~~-li~~L~~~GY~~~~-~l~~---~pYDWR~~~~--~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~ 135 (389)
T PF02450_consen 66 YFAK-LIENLEKLGYDRGK-DLFA---APYDWRLSPA--ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARY 135 (389)
T ss_pred hHHH-HHHHHHhcCcccCC-EEEE---Eeechhhchh--hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHH
Confidence 3444 34445657875421 2222 2234554422 12234566666666665543 579999999999999999
Q ss_pred HHhhCCC------eeeEEEEcCC
Q 004766 578 CINQRPD------LFGCALAHVG 594 (732)
Q Consensus 578 ~~~~~p~------~f~a~v~~~p 594 (732)
++...+. .+++.|+.++
T Consensus 136 fl~~~~~~~W~~~~i~~~i~i~~ 158 (389)
T PF02450_consen 136 FLQWMPQEEWKDKYIKRFISIGT 158 (389)
T ss_pred HHHhccchhhHHhhhhEEEEeCC
Confidence 8887643 3566665544
No 480
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=86.51 E-value=8.4 Score=31.34 Aligned_cols=59 Identities=14% Similarity=0.123 Sum_probs=34.9
Q ss_pred eEEECCCCcEEEEEEec-------------cCCceEEEEEEECCCCce--ecccccceeeeeEEEEeCCcEEEEEE
Q 004766 136 KVSVSEDAKYLAYALSY-------------SGSDWATIKLMRIEDQIV--EADALSWFKFSSIAWTHDSKGFFYSR 196 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~-------------~G~e~~~i~v~dl~~g~~--~~~~~~~~~~~~~~WspDg~~l~y~~ 196 (732)
++.+++++..|.|+-+. .+.....|..+|..|++. +.+.+.- ..+++.|+|++.|+++.
T Consensus 2 dldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~~~vl~~~L~f--pNGVals~d~~~vlv~E 75 (89)
T PF03088_consen 2 DLDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKETTVLLDGLYF--PNGVALSPDESFVLVAE 75 (89)
T ss_dssp EEEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTEEEEEEEEESS--EEEEEE-TTSSEEEEEE
T ss_pred ceeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCeEEEehhCCCc--cCeEEEcCCCCEEEEEe
Confidence 45567775556666431 133346899999999983 3333322 37899999999999874
No 481
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=86.29 E-value=14 Score=36.44 Aligned_cols=88 Identities=19% Similarity=0.122 Sum_probs=48.6
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHh-cCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRH-LGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 559 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 559 (732)
.| +|..||-...+....+. .+.+++.+ -|..|.+.++--| -...|. . ...+....+...+++.---
T Consensus 24 ~P-~ii~HGigd~c~~~~~~-~~~q~l~~~~g~~v~~leig~g--~~~s~l--------~-pl~~Qv~~~ce~v~~m~~l 90 (296)
T KOG2541|consen 24 VP-VIVWHGIGDSCSSLSMA-NLTQLLEELPGSPVYCLEIGDG--IKDSSL--------M-PLWEQVDVACEKVKQMPEL 90 (296)
T ss_pred CC-EEEEeccCcccccchHH-HHHHHHHhCCCCeeEEEEecCC--cchhhh--------c-cHHHHHHHHHHHHhcchhc
Confidence 45 56679976665543333 34455543 4777777776322 111121 1 1234444444333343334
Q ss_pred CCcEEEEecChhHHHHHHHHhh
Q 004766 560 SRKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~ 581 (732)
++-.-|+|.|.||+++=+++..
T Consensus 91 sqGynivg~SQGglv~Raliq~ 112 (296)
T KOG2541|consen 91 SQGYNIVGYSQGGLVARALIQF 112 (296)
T ss_pred cCceEEEEEccccHHHHHHHHh
Confidence 5678999999999777666554
No 482
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=86.04 E-value=40 Score=33.87 Aligned_cols=149 Identities=11% Similarity=0.054 Sum_probs=81.5
Q ss_pred eEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceE-EEEEecCCeEEEEeCC
Q 004766 244 YIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNK 322 (732)
Q Consensus 244 ~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~ 322 (732)
.+.++.+||.+..|++.++++. +.+++..... .+.......+-. ..|.+ ..+++. .
T Consensus 15 ~IS~v~f~~~~~~LLvssWDgs-----lrlYdv~~~~--------------l~~~~~~~~plL~c~F~d-~~~~~~-G-- 71 (323)
T KOG1036|consen 15 GISSVKFSPSSSDLLVSSWDGS-----LRLYDVPANS--------------LKLKFKHGAPLLDCAFAD-ESTIVT-G-- 71 (323)
T ss_pred ceeeEEEcCcCCcEEEEeccCc-----EEEEeccchh--------------hhhheecCCceeeeeccC-CceEEE-e--
Confidence 4568899999999999887654 5566655421 111111111111 12433 334443 2
Q ss_pred CCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEeec
Q 004766 323 DAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISA 401 (732)
Q Consensus 323 ~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~ 401 (732)
+-.+.|-++|+.++.. ..+-.+. ..+..+........+++..-| ..|.+||... +. ...++. ...|..++.
T Consensus 72 -~~dg~vr~~Dln~~~~-~~igth~--~~i~ci~~~~~~~~vIsgsWD--~~ik~wD~R~-~~-~~~~~d~~kkVy~~~v 143 (323)
T KOG1036|consen 72 -GLDGQVRRYDLNTGNE-DQIGTHD--EGIRCIEYSYEVGCVISGSWD--KTIKFWDPRN-KV-VVGTFDQGKKVYCMDV 143 (323)
T ss_pred -ccCceEEEEEecCCcc-eeeccCC--CceEEEEeeccCCeEEEcccC--ccEEEEeccc-cc-cccccccCceEEEEec
Confidence 2345799999988762 2232333 556667666434455666655 4788999762 22 222222 234444443
Q ss_pred ccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 402 RREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 402 s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.++.|++..+. ..+..||+..-
T Consensus 144 --~g~~LvVg~~~----r~v~iyDLRn~ 165 (323)
T KOG1036|consen 144 --SGNRLVVGTSD----RKVLIYDLRNL 165 (323)
T ss_pred --cCCEEEEeecC----ceEEEEEcccc
Confidence 46667764433 46788887654
No 483
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=85.51 E-value=2 Score=41.09 Aligned_cols=87 Identities=16% Similarity=0.148 Sum_probs=53.7
Q ss_pred cCcEEEEEcccCCCCCchh-HHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC----C-
Q 004766 510 LGAVFCIANIRGGGEYGEE-WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR----P- 583 (732)
Q Consensus 510 ~G~~v~~~~~rG~g~~g~~-~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~----p- 583 (732)
.-..|++|-||=..-+... -..........-.+.|+.+|-++.+++- -+-..+.|.|||.|+.+...++.++ |
T Consensus 44 ~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~-n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl 122 (207)
T PF11288_consen 44 GVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANY-NNGRPFILAGHSQGSMHLLRLLKEEIAGDPL 122 (207)
T ss_pred cCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhc-CCCCCEEEEEeChHHHHHHHHHHHHhcCchH
Confidence 4456777777743211110 0000011112345899999999877653 2335799999999999999998864 2
Q ss_pred --CeeeEEEEcCCccc
Q 004766 584 --DLFGCALAHVGVMD 597 (732)
Q Consensus 584 --~~f~a~v~~~p~~d 597 (732)
.+.+|.+.+.++..
T Consensus 123 ~~rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 123 RKRLVAAYLIGYPVTV 138 (207)
T ss_pred HhhhheeeecCccccH
Confidence 25667777777654
No 484
>PRK13613 lipoprotein LpqB; Provisional
Probab=84.72 E-value=20 Score=40.77 Aligned_cols=130 Identities=15% Similarity=0.236 Sum_probs=69.5
Q ss_pred hcCCCCCCCcEEeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCc
Q 004766 77 LFDSPRYDAPFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSD 156 (732)
Q Consensus 77 ~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e 156 (732)
.+.....+.|+++..-+.+.-.........+..... +|+. +-++...+. + ..|..+++|+||-++|++++.+|..
T Consensus 405 ~~~~~~Lt~PS~d~~g~vWtvd~~~~~~~vl~v~~~-~G~~-~~V~~~~l~--g-~~I~~lrvSrDG~RvAvv~~~~g~~ 479 (599)
T PRK13613 405 VTADGRLTSPSWDGRGDLWVVDRDPADPRLLWLLQG-DGEP-VEVRTPELD--G-HRVVAVRVARDGVRVALIVEKDGRR 479 (599)
T ss_pred eeccCcccCCcCcCCCCEEEecCCCCCceEEEEEcC-CCcE-EEeeccccC--C-CEeEEEEECCCccEEEEEEecCCCc
Confidence 345567899998654344444221111122443332 4443 224443332 2 3689999999999999998766654
Q ss_pred eEEEEEEEC---CCCc-eec----ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCC
Q 004766 157 WATIKLMRI---EDQI-VEA----DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK 228 (732)
Q Consensus 157 ~~~i~v~dl---~~g~-~~~----~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~ 228 (732)
+|+|--+ ..|. .+. .........+++|..|++ |+...... .....+|+..++..
T Consensus 480 --~v~va~V~R~~~G~~~l~~~~~l~~~l~~v~~~~W~~~~s-L~Vlg~~~---------------~~~~~v~~v~vdG~ 541 (599)
T PRK13613 480 --SLQIGRIVRDAKAVVSVEEFRSLAPELEDVTDMSWAGDSQ-LVVLGREE---------------GGVQQARYVQVDGS 541 (599)
T ss_pred --EEEEEEEEeCCCCcEEeeccEEeccCCCccceeEEcCCCE-EEEEeccC---------------CCCcceEEEecCCc
Confidence 3443322 2343 121 111111247899997765 55532111 12345888888754
Q ss_pred C
Q 004766 229 Q 229 (732)
Q Consensus 229 ~ 229 (732)
.
T Consensus 542 ~ 542 (599)
T PRK13613 542 T 542 (599)
T ss_pred C
Confidence 3
No 485
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=84.17 E-value=5.9 Score=39.75 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=21.0
Q ss_pred CcEEEEecChhHHHHHHHHhhCCC-eeeEEEE
Q 004766 561 RKLCIEGGSNGGLLVGACINQRPD-LFGCALA 591 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~p~-~f~a~v~ 591 (732)
+-+-++|+|.||++.=+++.+.|+ ..+-.|+
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlIS 111 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLIS 111 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEE
T ss_pred cceeeeeeccccHHHHHHHHHCCCCCceeEEE
Confidence 468899999999888777777655 2444444
No 486
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=83.91 E-value=42 Score=33.37 Aligned_cols=108 Identities=17% Similarity=0.112 Sum_probs=64.2
Q ss_pred EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceE--eccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCce
Q 004766 308 VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFE--VIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL 385 (732)
Q Consensus 308 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~--l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~ 385 (732)
...|||..++. + ..+ .|.++|.++.+ .++ |..+..+..++...+.+.+.|.|+....... ++|..++.
T Consensus 110 v~gpdg~~Wit--d--~~~-aI~R~dpkt~e-vt~f~lp~~~a~~nlet~vfD~~G~lWFt~q~G~yG---rLdPa~~~- 179 (353)
T COG4257 110 VVGPDGSAWIT--D--TGL-AIGRLDPKTLE-VTRFPLPLEHADANLETAVFDPWGNLWFTGQIGAYG---RLDPARNV- 179 (353)
T ss_pred EECCCCCeeEe--c--Ccc-eeEEecCcccc-eEEeecccccCCCcccceeeCCCccEEEeeccccce---ecCcccCc-
Confidence 46688876553 2 222 68888887765 222 2223335678888877767888887765444 45665443
Q ss_pred eeeccccc-ceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 386 LHQLPIEI-GSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 386 ~~~l~~~~-g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
++....|. +.-+.+..++||. ++|+ |. .-..|-++|..++
T Consensus 180 i~vfpaPqG~gpyGi~atpdGs-vwya--sl-agnaiaridp~~~ 220 (353)
T COG4257 180 ISVFPAPQGGGPYGICATPDGS-VWYA--SL-AGNAIARIDPFAG 220 (353)
T ss_pred eeeeccCCCCCCcceEECCCCc-EEEE--ec-cccceEEcccccC
Confidence 35555553 3345667788987 4443 21 1245778888776
No 487
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=83.60 E-value=48 Score=32.73 Aligned_cols=125 Identities=10% Similarity=0.069 Sum_probs=66.1
Q ss_pred EEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceE-EEEEecCCeEEEEeCCCC
Q 004766 246 FSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDA 324 (732)
Q Consensus 246 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~ 324 (732)
.+.++|+|+++++.+.. ..+++++.++..... .....+....+..+ ..|+.....+++.+-
T Consensus 162 ns~~~snd~~~~~~Vgd-----s~~Vf~y~id~~sey----------~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Q--- 223 (344)
T KOG4532|consen 162 NSLHYSNDPSWGSSVGD-----SRRVFRYAIDDESEY----------IENIYEAPTSDHGFYNSFSENDLQFAVVFQ--- 223 (344)
T ss_pred eeeEEcCCCceEEEecC-----CCcceEEEeCCccce----------eeeeEecccCCCceeeeeccCcceEEEEec---
Confidence 47899999999987643 234555555431110 00112222233333 357766666665443
Q ss_pred CCceEEEEeCCCCCC-ceEecc--CCCCCceeEEEEecCC--EEEEEEecCCeeEEEEEeCCCCceeeeccc
Q 004766 325 PKYKIIRVDLKEPND-WFEVIP--EAERDVLESATAVNLN--QMIVSYLSDVKYVLQIRDLKNGSLLHQLPI 391 (732)
Q Consensus 325 ~~~~l~~~d~~~~~~-~~~l~~--~~~~~~l~~~~~~~~~--~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~ 391 (732)
++.+..+|+..... ..+... +.....+....++..+ .|++.. .+.+.+.+.|+.+++..+.|..
T Consensus 224 -dg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~s--Ehfs~~hv~D~R~~~~~q~I~i 292 (344)
T KOG4532|consen 224 -DGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFIS--EHFSRVHVVDTRNYVNHQVIVI 292 (344)
T ss_pred -CCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEe--cCcceEEEEEcccCceeeEEec
Confidence 33577777754330 111111 1134567777777433 234333 3457888999988876555543
No 488
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=83.55 E-value=3 Score=38.93 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=27.7
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhh
Q 004766 540 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 540 ~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 581 (732)
..+.+|...++.. . ....++.++|||||..+++.++.+
T Consensus 92 ~~L~~f~~gl~a~---~-~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 92 PRLARFLDGLRAT---H-GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred HHHHHHHHHhhhh---c-CCCCCEEEEEecchhHHHHHHhhh
Confidence 3455555555432 2 345799999999999999999887
No 489
>PF03283 PAE: Pectinacetylesterase
Probab=83.47 E-value=1.4 Score=46.39 Aligned_cols=38 Identities=21% Similarity=0.288 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHh
Q 004766 543 DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACIN 580 (732)
Q Consensus 543 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 580 (732)
.-+.+++++|.++|+-++++|.+.|.|+||+-+..-+.
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 45788999999999999999999999999998776544
No 490
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=83.47 E-value=43 Score=34.86 Aligned_cols=74 Identities=18% Similarity=0.294 Sum_probs=45.0
Q ss_pred EEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEe-ccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCcee
Q 004766 308 VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEV-IPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLL 386 (732)
Q Consensus 308 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l-~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~ 386 (732)
.|+||+++ ++.++++. ..++-.++. .-.+..+ ..|. ..+..+++.+ ++++++..-| .+|++||..+|+.+
T Consensus 158 avS~D~~~-IitaDRDE-kIRvs~ypa--~f~IesfclGH~--eFVS~isl~~-~~~LlS~sGD--~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 158 AVSPDDQF-IITADRDE-KIRVSRYPA--TFVIESFCLGHK--EFVSTISLTD-NYLLLSGSGD--KTLRLWDITSGKLL 228 (390)
T ss_pred eecCCCCE-EEEecCCc-eEEEEecCc--ccchhhhccccH--hheeeeeecc-CceeeecCCC--CcEEEEecccCCcc
Confidence 48998854 44566653 344444432 1111211 2343 5678888887 6776665544 68999999999876
Q ss_pred eecc
Q 004766 387 HQLP 390 (732)
Q Consensus 387 ~~l~ 390 (732)
..+.
T Consensus 229 ~t~d 232 (390)
T KOG3914|consen 229 DTCD 232 (390)
T ss_pred cccc
Confidence 5544
No 491
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=83.33 E-value=51 Score=32.81 Aligned_cols=226 Identities=12% Similarity=0.036 Sum_probs=104.4
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee----cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE----ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~----~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+..-|||. ++..+. | .-|.-+|-++.+.. +......+....+|.++|. |.|+....-.
T Consensus 108 giv~gpdg~--~Witd~-~---~aI~R~dpkt~evt~f~lp~~~a~~nlet~vfD~~G~-lWFt~q~G~y---------- 170 (353)
T COG4257 108 GIVVGPDGS--AWITDT-G---LAIGRLDPKTLEVTRFPLPLEHADANLETAVFDPWGN-LWFTGQIGAY---------- 170 (353)
T ss_pred eEEECCCCC--eeEecC-c---ceeEEecCcccceEEeecccccCCCcccceeeCCCcc-EEEeeccccc----------
Confidence 567889996 444432 2 25666777776632 2222222346788888885 6666432210
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
=+|+ +....+.+|..+... --.+++.+|||..-+ .+-. .+-|-.+|..++-.. .+
T Consensus 171 -----------GrLd-Pa~~~i~vfpaPqG~-gpyGi~atpdGsvwy-asla----gnaiaridp~~~~ae--v~----- 225 (353)
T COG4257 171 -----------GRLD-PARNVISVFPAPQGG-GPYGICATPDGSVWY-ASLA----GNAIARIDPFAGHAE--VV----- 225 (353)
T ss_pred -----------eecC-cccCceeeeccCCCC-CCcceEECCCCcEEE-Eecc----ccceEEcccccCCcc--ee-----
Confidence 0111 112334455544322 224778899998533 2211 133555564442100 00
Q ss_pred CCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 292 LLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
.+...+..+ .-..|+.--.++++. ..+ ..+|+++|..... |.+.--+.....-.++.+...+++.++.-..
T Consensus 226 -p~P~~~~~g---sRriwsdpig~~wit-twg--~g~l~rfdPs~~s-W~eypLPgs~arpys~rVD~~grVW~sea~a- 296 (353)
T COG4257 226 -PQPNALKAG---SRRIWSDPIGRAWIT-TWG--TGSLHRFDPSVTS-WIEYPLPGSKARPYSMRVDRHGRVWLSEADA- 296 (353)
T ss_pred -cCCCccccc---ccccccCccCcEEEe-ccC--CceeeEeCccccc-ceeeeCCCCCCCcceeeeccCCcEEeecccc-
Confidence 001111111 112344323455543 332 4689999987665 6543222212333445555434554433222
Q ss_pred eeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEec
Q 004766 372 KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTS 414 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss 414 (732)
..|.++|..+.+ .+.+..+.-....+....-..+++++-+.
T Consensus 297 -gai~rfdpeta~-ftv~p~pr~n~gn~ql~gr~ge~W~~e~g 337 (353)
T COG4257 297 -GAIGRFDPETAR-FTVLPIPRPNSGNIQLDGRPGELWFTEAG 337 (353)
T ss_pred -CceeecCcccce-EEEecCCCCCCCceeccCCCCceeecccC
Confidence 467778876433 35555442111122333333455554433
No 492
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=82.96 E-value=3 Score=41.12 Aligned_cols=38 Identities=18% Similarity=0.350 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhh
Q 004766 542 FDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ 581 (732)
Q Consensus 542 ~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 581 (732)
+.++...++.+.++ + ...+|.+.|||+||.++..++..
T Consensus 111 ~~~~~~~~~~~~~~-~-p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 111 YNQVLPELKSALKQ-Y-PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHHHHHHHHhh-C-CCceEEEEccCHHHHHHHHHHHH
Confidence 34455555555544 2 24689999999999998877764
No 493
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=82.80 E-value=85 Score=34.96 Aligned_cols=287 Identities=11% Similarity=0.057 Sum_probs=0.0
Q ss_pred cCCCCeeEEEEEeCCCCCceEEeCCCCcCCC-----------CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC
Q 004766 99 TGLQPQSVLYVQDSLDAKAKVLLDPNTLSDD-----------GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED 167 (732)
Q Consensus 99 ~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~-----------~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~ 167 (732)
.......+||+-+..++ ..|+|.....-. +.-.+-.+.|-| |+.++... .|+ .++++||+++
T Consensus 59 ~~~n~eHiLavadE~G~--i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap-ge~~lVsa--sGD--sT~r~Wdvk~ 131 (720)
T KOG0321|consen 59 AAPNKEHILAVADEDGG--IILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP-GESLLVSA--SGD--STIRPWDVKT 131 (720)
T ss_pred CCCCccceEEEecCCCc--eeeecchhhhcchhhhhhcccccccceeEeeccCC-CceeEEEc--cCC--ceeeeeeecc
Q ss_pred Cceecc--ccccee-eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEec------
Q 004766 168 QIVEAD--ALSWFK-FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKD------ 238 (732)
Q Consensus 168 g~~~~~--~~~~~~-~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~------ 238 (732)
++..-. -++... .-+.+|.|+..-+|.+ .++..++.+|++.-........+..
T Consensus 132 s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~t------------------GgRDg~illWD~R~n~~d~~e~~~~~~~~~~ 193 (720)
T KOG0321|consen 132 SRLVGGRLNLGHTGSVKSECFMPTNPAVFCT------------------GGRDGEILLWDCRCNGVDALEEFDNRIYGRH 193 (720)
T ss_pred ceeecceeecccccccchhhhccCCCcceee------------------ccCCCcEEEEEEeccchhhHHHHhhhhhccc
Q ss_pred -----------------CCCCeeEEE---eEEecCCcEEEEEEe-cCCcceEEEEEEeCCCCCCCcccccccCCCCCcEE
Q 004766 239 -----------------PEHPKYIFS---GHVTEDGQYLVMCIE-ENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVK 297 (732)
Q Consensus 239 -----------------~~~~~~~~~---~~~SpDg~~l~~~~~-~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 297 (732)
.....-+.+ +.+..|...|+-.+. ++. |-++|+....+.-+.-.....+.+..
T Consensus 194 n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~-----iKVWDLRk~~~~~r~ep~~~~~~~t~- 267 (720)
T KOG0321|consen 194 NTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADST-----IKVWDLRKNYTAYRQEPRGSDKYPTH- 267 (720)
T ss_pred cCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcc-----eEEEeecccccccccCCCcccCccCc-
Q ss_pred eeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEE----EEecCCEEEEEEecCCee
Q 004766 298 LIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESA----TAVNLNQMIVSYLSDVKY 373 (732)
Q Consensus 298 l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~----~~~~~~~l~~~~~~~g~~ 373 (732)
-.......-......|.+|+.-..++ .||.+++.+-. ...+..-.......+ ..++++..++....+...
T Consensus 268 skrs~G~~nL~lDssGt~L~AsCtD~----sIy~ynm~s~s--~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~a 341 (720)
T KOG0321|consen 268 SKRSVGQVNLILDSSGTYLFASCTDN----SIYFYNMRSLS--ISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQA 341 (720)
T ss_pred ccceeeeEEEEecCCCCeEEEEecCC----cEEEEeccccC--cCchhhccCcccceeeeeeecCCCCceEeccCCCcce
Q ss_pred EEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEE
Q 004766 374 VLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQC 424 (732)
Q Consensus 374 ~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~ 424 (732)
-++.++-. ......+..+.-.|..+.+.+....=.++. +..--..+|++
T Consensus 342 yiw~vs~~-e~~~~~l~Ght~eVt~V~w~pS~~t~v~Tc-SdD~~~kiW~l 390 (720)
T KOG0321|consen 342 YIWVVSSP-EAPPALLLGHTREVTTVRWLPSATTPVATC-SDDFRVKIWRL 390 (720)
T ss_pred eeeeecCc-cCChhhhhCcceEEEEEeeccccCCCceee-ccCcceEEEec
No 494
>PRK13614 lipoprotein LpqB; Provisional
Probab=82.74 E-value=27 Score=39.32 Aligned_cols=130 Identities=13% Similarity=0.091 Sum_probs=68.3
Q ss_pred hcCCCCCCCcEEeCCEEEEEEEcCCCCeeEEEEEeCCCCCc---eE-EeCCCCcCCCCCEEEEeEEECCCCcEEEEEEec
Q 004766 77 LFDSPRYDAPFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKA---KV-LLDPNTLSDDGTAALIKVSVSEDAKYLAYALSY 152 (732)
Q Consensus 77 ~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~---~~-l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~ 152 (732)
.+.....+.|+++..-+.++-.++. +...+..+....++. .+ -+....+. ...|..+++|+||-++|+.+..
T Consensus 379 ~~~g~~Lt~PS~d~~g~vWtv~~g~-~~~vv~~~~~g~~~~~~~~~~~v~~~~l~---g~~I~~lrvSrDG~R~Avi~~~ 454 (573)
T PRK13614 379 LTSGSTLTRPSFSPQDWVWTAGPGG-NGRIVAYRPTGVAEGAQAPTVTLTADWLA---GRTVKELRVSREGVRALVISEQ 454 (573)
T ss_pred eecCCCccCCcccCCCCEEEeeCCC-CceEEEEecCCCcccccccceeecccccC---CCeeEEEEECCCccEEEEEEEe
Confidence 3445678899986544555544432 223233332211110 11 12222221 2348899999999999999877
Q ss_pred cCCceEEEEEE---ECCCCce--eccccc---ceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEE
Q 004766 153 SGSDWATIKLM---RIEDQIV--EADALS---WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHF 224 (732)
Q Consensus 153 ~G~e~~~i~v~---dl~~g~~--~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 224 (732)
+|.. +|+|- .-..|.+ +..... .....+++|..|++ |+..+... ....++++..
T Consensus 455 ~g~~--~V~va~V~R~~~G~P~~L~~~~~~~~~~~~~sl~W~~~~s-l~V~~~~~---------------~~~~~~~~v~ 516 (573)
T PRK13614 455 NGKS--RVQVAGIVRNEDGTPRELTAPITLAADSDADTGAWVGDST-VVVTKASA---------------TSNVVPELLS 516 (573)
T ss_pred CCcc--EEEEEEEEeCCCCCeEEccCceecccCCCcceeEEcCCCE-EEEEeccC---------------CCcceEEEEE
Confidence 7754 34432 2235552 221111 12346899997665 66654322 1234577777
Q ss_pred CCCC
Q 004766 225 LGTK 228 (732)
Q Consensus 225 lgt~ 228 (732)
++.+
T Consensus 517 v~~g 520 (573)
T PRK13614 517 VDAG 520 (573)
T ss_pred eCCC
Confidence 7543
No 495
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=82.67 E-value=13 Score=44.13 Aligned_cols=111 Identities=11% Similarity=0.085 Sum_probs=66.6
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCce--ecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV--EADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~--~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
.++|--||++.|.+.-....+...|+|||-+ |.. ..+...+. ...++|-|.|..|+.......
T Consensus 200 ~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l-~~~LsWkPsgs~iA~iq~~~s------------- 264 (1265)
T KOG1920|consen 200 SISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGL-QHSLSWKPSGSLIAAIQCKTS------------- 264 (1265)
T ss_pred eEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCccccc-ccceeecCCCCeEeeeeecCC-------------
Confidence 3789999999998765555555789999988 442 11222222 378999999988887654331
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENC 265 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 265 (732)
.. +|......+ ......+...+.+..-...+.|..++.-|+...+...
T Consensus 265 --d~-~IvffErNG-L~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e 312 (1265)
T KOG1920|consen 265 --DS-DIVFFERNG-LRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLE 312 (1265)
T ss_pred --CC-cEEEEecCC-ccccccccCCcccccchheeeecCCCCceeeeecccc
Confidence 11 333333321 1122233323322221457899999999988665443
No 496
>PHA02713 hypothetical protein; Provisional
Probab=82.39 E-value=95 Score=35.23 Aligned_cols=103 Identities=11% Similarity=0.085 Sum_probs=55.7
Q ss_pred ceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC----eeEEEEEeCCC-Cceeeecc-cc--cceeeE
Q 004766 327 YKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV----KYVLQIRDLKN-GSLLHQLP-IE--IGSVNA 398 (732)
Q Consensus 327 ~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g----~~~l~~~d~~~-g~~~~~l~-~~--~g~v~~ 398 (732)
..+..+|..+.. |+.+.+-.....-.++...+ +.||+....++ ...+.++|+.+ .+. +.+. ++ ......
T Consensus 432 ~~ve~YDP~td~-W~~v~~m~~~r~~~~~~~~~-~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W-~~~~~m~~~r~~~~~ 508 (557)
T PHA02713 432 NKVIRYDTVNNI-WETLPNFWTGTIRPGVVSHK-DDIYVVCDIKDEKNVKTCIFRYNTNTYNGW-ELITTTESRLSALHT 508 (557)
T ss_pred ceEEEECCCCCe-EeecCCCCcccccCcEEEEC-CEEEEEeCCCCCCccceeEEEecCCCCCCe-eEccccCccccccee
Confidence 468889988876 87665432222222344445 78888865432 13578899986 454 4433 22 111211
Q ss_pred eecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEe
Q 004766 399 ISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRE 438 (732)
Q Consensus 399 ~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~ 438 (732)
.. -+ +.+++. .+......+..||+.+.+ ++.+..
T Consensus 509 ~~--~~-~~iyv~-Gg~~~~~~~e~yd~~~~~--W~~~~~ 542 (557)
T PHA02713 509 IL--HD-NTIMML-HCYESYMLQDTFNVYTYE--WNHICH 542 (557)
T ss_pred EE--EC-CEEEEE-eeecceeehhhcCccccc--ccchhh
Confidence 11 13 345543 233333467788888874 655543
No 497
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=82.36 E-value=83 Score=34.54 Aligned_cols=97 Identities=10% Similarity=0.079 Sum_probs=55.4
Q ss_pred CceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecc--c
Q 004766 326 KYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISAR--R 403 (732)
Q Consensus 326 ~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s--~ 403 (732)
..++..++..... .....-.. .....++.+++|+.++++.. .+|.+||.++++.+..++.+.+.|..+++. .
T Consensus 123 d~~v~~~~~~~~~-~~~~~~~~-~~~~~sl~is~D~~~l~~as----~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~ 196 (541)
T KOG4547|consen 123 DLKVVYILEKEKV-IIRIWKEQ-KPLVSSLCISPDGKILLTAS----RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLI 196 (541)
T ss_pred ceeEEEEecccce-eeeeeccC-CCccceEEEcCCCCEEEecc----ceEEEEEccCceEEEEecCCCcceEEEEEEEec
Confidence 5677777776654 22223222 23456788888766666543 479999999888777777655555544432 2
Q ss_pred CCc--EEEEEEecCCCCceEEEEECCC
Q 004766 404 EDS--VVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 404 d~~--~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+|. ..+++...+..--.++..+-+.
T Consensus 197 ~g~~G~~vLssa~~~r~i~~w~v~~~~ 223 (541)
T KOG4547|consen 197 DGIIGKYVLSSAAAERGITVWVVEKED 223 (541)
T ss_pred cccccceeeeccccccceeEEEEEccc
Confidence 332 2233333344444556666543
No 498
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=82.18 E-value=1.5 Score=49.34 Aligned_cols=46 Identities=20% Similarity=0.330 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHc-----CCC--CCCcEEEEecChhHHHHHHHHhhCCCeeeEE
Q 004766 543 DDFISASEYLISA-----GYT--QSRKLCIEGGSNGGLLVGACINQRPDLFGCA 589 (732)
Q Consensus 543 ~D~~~~~~~l~~~-----~~~--d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~ 589 (732)
+=+.+||+++.+. .+. -|.-|++.||||||.++-++++. |......
T Consensus 157 EYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl-kn~~~~s 209 (973)
T KOG3724|consen 157 EYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL-KNEVQGS 209 (973)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh-hhhccch
Confidence 3445677766543 221 26779999999999888777765 6554444
No 499
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=81.56 E-value=54 Score=31.83 Aligned_cols=88 Identities=13% Similarity=0.171 Sum_probs=53.3
Q ss_pred EEEecCCeEEEEeCCCCCCceE--EEEeCCCCC--CceEeccCC-----CCCceeEEEEecCCEEEEEEecCCeeEEEEE
Q 004766 308 VIANDDTVFTFLTNKDAPKYKI--IRVDLKEPN--DWFEVIPEA-----ERDVLESATAVNLNQMIVSYLSDVKYVLQIR 378 (732)
Q Consensus 308 ~~s~dg~~l~~~s~~~~~~~~l--~~~d~~~~~--~~~~l~~~~-----~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~ 378 (732)
.|+.|.+.+|++-.. ++.+ |-+|..++. +.+.++.-+ +...-.+..+...+.|+++.-.. +++..+
T Consensus 164 ~Wd~d~K~fY~iDsl---n~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng--~~V~~~ 238 (310)
T KOG4499|consen 164 AWDSDAKKFYYIDSL---NYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNG--GTVQKV 238 (310)
T ss_pred cccccCcEEEEEccC---ceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecC--cEEEEE
Confidence 488888888886433 5666 445566654 222222211 01111234454446777776655 579999
Q ss_pred eCCCCceeeecccccceeeEee
Q 004766 379 DLKNGSLLHQLPIEIGSVNAIS 400 (732)
Q Consensus 379 d~~~g~~~~~l~~~~g~v~~~~ 400 (732)
|+.+|+.+.++.+|.-.+++..
T Consensus 239 dp~tGK~L~eiklPt~qitscc 260 (310)
T KOG4499|consen 239 DPTTGKILLEIKLPTPQITSCC 260 (310)
T ss_pred CCCCCcEEEEEEcCCCceEEEE
Confidence 9999999888888855555444
No 500
>PLN02454 triacylglycerol lipase
Probab=81.54 E-value=2.4 Score=44.93 Aligned_cols=40 Identities=13% Similarity=0.120 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHh
Q 004766 541 CFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACIN 580 (732)
Q Consensus 541 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 580 (732)
..+++.+.++.|+++---..-+|.+.|||+||.|+..++.
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHH
Confidence 4467788888887753211225999999999999988875
Done!