Query 004766
Match_columns 732
No_of_seqs 483 out of 4198
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 05:07:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004766.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004766hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iuj_A Prolyl endopeptidase; h 100.0 5E-101 2E-105 892.4 83.6 680 4-729 3-687 (693)
2 2xdw_A Prolyl endopeptidase; a 100.0 4.9E-97 2E-101 863.6 86.9 693 11-732 4-710 (710)
3 2bkl_A Prolyl endopeptidase; m 100.0 5.2E-96 2E-100 852.4 82.6 674 12-730 2-679 (695)
4 1yr2_A Prolyl oligopeptidase; 100.0 1.2E-93 4.2E-98 838.2 81.5 678 10-730 37-721 (741)
5 2xe4_A Oligopeptidase B; hydro 100.0 2.5E-93 8.7E-98 832.0 79.7 675 1-731 21-746 (751)
6 4hvt_A Ritya.17583.B, post-pro 100.0 3.1E-91 1E-95 794.0 71.0 657 24-730 13-710 (711)
7 3azo_A Aminopeptidase; POP fam 100.0 7.3E-54 2.5E-58 496.3 59.0 589 81-730 24-652 (662)
8 4a5s_A Dipeptidyl peptidase 4 100.0 7.3E-51 2.5E-55 476.2 56.8 584 87-729 70-728 (740)
9 3o4h_A Acylamino-acid-releasin 100.0 5.1E-49 1.7E-53 448.4 50.5 553 67-728 9-581 (582)
10 2ecf_A Dipeptidyl peptidase IV 100.0 3.1E-47 1.1E-51 446.6 59.0 567 83-727 111-740 (741)
11 2z3z_A Dipeptidyl aminopeptida 100.0 7.1E-47 2.4E-51 441.0 61.0 561 91-726 93-706 (706)
12 1z68_A Fibroblast activation p 100.0 2.6E-47 8.8E-52 445.7 54.3 583 88-727 69-719 (719)
13 1xfd_A DIP, dipeptidyl aminope 100.0 4.7E-47 1.6E-51 443.8 43.0 576 89-728 71-723 (723)
14 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 1.2E-24 4E-29 233.9 21.4 275 408-729 85-367 (386)
15 1vlq_A Acetyl xylan esterase; 99.9 1.2E-23 4.3E-28 221.5 20.7 247 446-728 63-336 (337)
16 3hxk_A Sugar hydrolase; alpha- 99.9 3.3E-23 1.1E-27 211.5 21.5 237 454-728 17-268 (276)
17 3ga7_A Acetyl esterase; phosph 99.9 1.2E-22 4.1E-27 212.9 26.3 240 448-728 60-324 (326)
18 3bxp_A Putative lipase/esteras 99.9 1.3E-22 4.5E-27 207.1 23.2 236 450-726 3-271 (277)
19 2o7r_A CXE carboxylesterase; a 99.9 8.3E-23 2.9E-27 215.3 21.5 285 403-729 5-334 (338)
20 4ao6_A Esterase; hydrolase, th 99.9 9.4E-23 3.2E-27 206.0 20.1 216 450-727 29-259 (259)
21 3f67_A Putative dienelactone h 99.9 1.5E-22 5.3E-27 201.7 21.3 225 448-724 3-240 (241)
22 3doh_A Esterase; alpha-beta hy 99.9 3.1E-22 1.1E-26 214.3 21.6 221 450-725 143-378 (380)
23 1l7a_A Cephalosporin C deacety 99.9 2E-22 6.7E-27 209.9 19.4 243 447-727 52-317 (318)
24 3ebl_A Gibberellin receptor GI 99.9 3.7E-21 1.3E-25 204.2 26.3 245 447-729 60-354 (365)
25 3bjr_A Putative carboxylestera 99.9 3.3E-22 1.1E-26 205.0 17.2 234 450-725 18-282 (283)
26 3qh4_A Esterase LIPW; structur 99.9 9.7E-22 3.3E-26 204.8 20.5 236 448-727 57-316 (317)
27 3fak_A Esterase/lipase, ESTE5; 99.9 1.4E-21 4.7E-26 204.2 20.1 228 464-729 66-311 (322)
28 1mpx_A Alpha-amino acid ester 99.9 1E-21 3.6E-26 222.4 20.2 258 447-729 21-357 (615)
29 3ls2_A S-formylglutathione hyd 99.9 1E-21 3.6E-26 200.8 17.4 249 450-727 14-279 (280)
30 3fcy_A Xylan esterase 1; alpha 99.9 6.4E-22 2.2E-26 209.2 15.6 240 447-724 78-343 (346)
31 3i6y_A Esterase APC40077; lipa 99.9 4.6E-22 1.6E-26 203.5 13.5 247 450-727 16-279 (280)
32 2b9v_A Alpha-amino acid ester 99.9 1.9E-21 6.5E-26 220.9 19.2 254 448-729 34-369 (652)
33 2zsh_A Probable gibberellin re 99.9 1.2E-20 4.3E-25 199.6 24.2 240 448-724 69-350 (351)
34 3k2i_A Acyl-coenzyme A thioest 99.9 1.2E-20 4E-25 205.0 24.4 223 464-729 144-414 (422)
35 3fcx_A FGH, esterase D, S-form 99.9 4E-22 1.4E-26 204.0 12.0 248 450-727 15-281 (282)
36 3e4d_A Esterase D; S-formylglu 99.9 6.6E-22 2.3E-26 202.0 13.5 247 450-727 14-278 (278)
37 3ain_A 303AA long hypothetical 99.9 4.9E-20 1.7E-24 192.4 26.9 237 447-728 61-322 (323)
38 2hm7_A Carboxylesterase; alpha 99.9 1.5E-20 5.2E-25 195.3 23.0 240 447-727 44-310 (310)
39 3hlk_A Acyl-coenzyme A thioest 99.9 1.9E-20 6.6E-25 204.3 24.2 222 464-728 160-429 (446)
40 1lzl_A Heroin esterase; alpha/ 99.9 1.2E-20 4.3E-25 197.2 21.1 242 447-729 47-319 (323)
41 1zi8_A Carboxymethylenebutenol 99.9 3.4E-21 1.1E-25 191.3 15.1 212 454-728 6-234 (236)
42 2o2g_A Dienelactone hydrolase; 99.9 2.7E-20 9.1E-25 182.9 20.8 215 448-727 9-223 (223)
43 2hdw_A Hypothetical protein PA 99.9 7.7E-21 2.6E-25 202.4 17.9 244 448-726 65-367 (367)
44 2wir_A Pesta, alpha/beta hydro 99.9 2E-20 6.9E-25 194.7 20.5 236 448-727 48-312 (313)
45 2c7b_A Carboxylesterase, ESTE1 99.9 4E-20 1.4E-24 192.2 22.7 240 448-728 45-310 (311)
46 2i3d_A AGR_C_3351P, hypothetic 99.9 1.4E-19 4.9E-24 181.5 25.8 209 453-728 25-235 (249)
47 3k6k_A Esterase/lipase; alpha/ 99.8 3.2E-20 1.1E-24 193.9 21.5 232 448-729 57-311 (322)
48 3ksr_A Putative serine hydrola 99.8 8.4E-21 2.9E-25 195.0 16.1 234 450-728 5-243 (290)
49 4b6g_A Putative esterase; hydr 99.8 1.7E-21 5.7E-26 199.7 10.5 247 450-727 21-283 (283)
50 4e15_A Kynurenine formamidase; 99.8 1.1E-20 3.9E-25 195.6 15.8 215 451-704 58-281 (303)
51 2gop_A Trilobed protease; beta 99.8 2.7E-18 9.2E-23 181.1 33.9 301 74-425 8-330 (347)
52 1jkm_A Brefeldin A esterase; s 99.8 1.5E-19 5.1E-24 191.9 22.6 246 448-726 79-358 (361)
53 2wtm_A EST1E; hydrolase; 1.60A 99.8 5.4E-20 1.9E-24 184.8 18.0 236 454-727 4-250 (251)
54 1jjf_A Xylanase Z, endo-1,4-be 99.8 6E-19 2.1E-23 179.1 24.1 220 450-728 31-264 (268)
55 2uz0_A Esterase, tributyrin es 99.8 2.6E-20 8.8E-25 188.4 12.9 240 449-729 5-259 (263)
56 3fnb_A Acylaminoacyl peptidase 99.8 2.2E-19 7.7E-24 193.8 19.9 240 450-728 134-403 (405)
57 4h0c_A Phospholipase/carboxyle 99.8 3.6E-20 1.2E-24 180.1 12.3 187 478-723 19-209 (210)
58 3trd_A Alpha/beta hydrolase; c 99.8 3.8E-19 1.3E-23 172.9 19.5 200 451-722 6-207 (208)
59 3pfb_A Cinnamoyl esterase; alp 99.8 6.1E-19 2.1E-23 178.7 21.3 237 450-725 21-267 (270)
60 1sfr_A Antigen 85-A; alpha/bet 99.8 2.4E-19 8.4E-24 185.4 18.1 248 450-729 8-286 (304)
61 1jji_A Carboxylesterase; alpha 99.8 5.1E-19 1.7E-23 183.8 20.4 228 450-724 55-310 (311)
62 1jfr_A Lipase; serine hydrolas 99.8 1.2E-18 4E-23 176.2 22.3 206 448-729 22-234 (262)
63 1lns_A X-prolyl dipeptidyl ami 99.8 4.4E-19 1.5E-23 204.4 20.0 252 444-728 161-523 (763)
64 2fuk_A XC6422 protein; A/B hyd 99.8 1E-18 3.5E-23 171.4 19.4 208 450-728 9-218 (220)
65 3vis_A Esterase; alpha/beta-hy 99.8 1E-18 3.6E-23 181.0 20.3 193 459-729 79-278 (306)
66 3hju_A Monoglyceride lipase; a 99.8 2.7E-18 9.2E-23 180.7 23.7 242 448-727 31-313 (342)
67 2hqs_A Protein TOLB; TOLB, PAL 99.8 7.5E-17 2.6E-21 174.6 35.5 263 90-404 143-408 (415)
68 3h04_A Uncharacterized protein 99.8 3E-18 1E-22 173.4 22.5 241 452-727 4-274 (275)
69 4fbl_A LIPS lipolytic enzyme; 99.8 7.2E-19 2.5E-23 179.8 16.6 213 479-725 49-281 (281)
70 2pbl_A Putative esterase/lipas 99.8 8.3E-19 2.8E-23 177.3 16.8 200 454-707 41-247 (262)
71 3d7r_A Esterase; alpha/beta fo 99.8 1.9E-18 6.6E-23 180.7 19.0 222 465-727 84-323 (326)
72 1r88_A MPT51/MPB51 antigen; AL 99.8 6.7E-19 2.3E-23 179.8 14.1 240 449-727 9-274 (280)
73 3mve_A FRSA, UPF0255 protein V 99.8 1.4E-18 4.9E-23 187.3 17.3 235 449-727 166-414 (415)
74 4fhz_A Phospholipase/carboxyle 99.8 8.6E-19 2.9E-23 178.1 14.6 209 458-728 46-268 (285)
75 3og9_A Protein YAHD A copper i 99.8 2.1E-18 7.3E-23 167.9 16.9 184 479-725 15-208 (209)
76 4ezi_A Uncharacterized protein 99.8 2E-18 7E-23 182.2 17.8 262 447-729 39-373 (377)
77 3llc_A Putative hydrolase; str 99.8 8.5E-18 2.9E-22 169.9 21.3 236 450-724 10-268 (270)
78 1vkh_A Putative serine hydrola 99.8 2.2E-19 7.5E-24 182.8 8.9 207 478-722 38-272 (273)
79 3d0k_A Putative poly(3-hydroxy 99.8 4.2E-18 1.4E-22 176.3 18.0 213 452-704 25-273 (304)
80 3iii_A COCE/NOND family hydrol 99.8 8.5E-18 2.9E-22 186.2 20.9 240 450-728 40-322 (560)
81 2qm0_A BES; alpha-beta structu 99.8 8E-19 2.7E-23 178.8 11.7 231 450-722 17-272 (275)
82 1ufo_A Hypothetical protein TT 99.8 7.7E-18 2.6E-22 166.8 18.2 220 456-727 7-236 (238)
83 3pe6_A Monoglyceride lipase; a 99.8 4.1E-17 1.4E-21 167.5 24.3 237 455-728 21-296 (303)
84 3pe7_A Oligogalacturonate lyas 99.8 2.1E-16 7.2E-21 169.2 29.5 260 136-438 40-337 (388)
85 1dqz_A 85C, protein (antigen 8 99.8 6.6E-18 2.3E-22 172.5 16.1 244 450-727 5-279 (280)
86 1fj2_A Protein (acyl protein t 99.8 2.1E-17 7E-22 163.3 18.6 201 469-728 14-230 (232)
87 2ecf_A Dipeptidyl peptidase IV 99.8 5.9E-16 2E-20 180.9 33.5 301 82-429 38-416 (741)
88 4a5s_A Dipeptidyl peptidase 4 99.8 5E-16 1.7E-20 181.2 32.5 303 85-429 21-401 (740)
89 2hqs_A Protein TOLB; TOLB, PAL 99.7 9.7E-16 3.3E-20 165.8 32.4 245 141-429 141-388 (415)
90 3u0v_A Lysophospholipase-like 99.7 1.7E-17 5.8E-22 165.0 16.7 195 479-728 21-233 (239)
91 3b5e_A MLL8374 protein; NP_108 99.7 2.2E-17 7.5E-22 162.4 16.5 197 463-726 16-217 (223)
92 1auo_A Carboxylesterase; hydro 99.7 9.3E-17 3.2E-21 156.9 20.1 190 479-727 12-218 (218)
93 3rm3_A MGLP, thermostable mono 99.7 5.2E-17 1.8E-21 164.5 18.8 214 479-727 38-270 (270)
94 3cn9_A Carboxylesterase; alpha 99.7 6E-17 2E-21 159.6 18.8 190 477-726 20-226 (226)
95 2r8b_A AGR_C_4453P, uncharacte 99.7 2.1E-17 7.3E-22 165.7 15.3 184 479-728 60-250 (251)
96 3dkr_A Esterase D; alpha beta 99.7 3.1E-17 1.1E-21 163.6 16.4 216 478-725 19-248 (251)
97 3bdi_A Uncharacterized protein 99.7 1.4E-16 4.7E-21 154.2 20.0 199 452-723 5-205 (207)
98 3c5m_A Oligogalacturonate lyas 99.7 2.8E-16 9.7E-21 168.5 23.6 257 135-438 39-337 (396)
99 4f0j_A Probable hydrolytic enz 99.7 2.3E-16 7.8E-21 163.1 21.5 238 449-724 18-313 (315)
100 1gkl_A Endo-1,4-beta-xylanase 99.7 2.7E-16 9.1E-21 161.7 21.2 206 450-704 40-272 (297)
101 4f21_A Carboxylesterase/phosph 99.7 1.3E-16 4.4E-21 158.7 18.1 215 449-728 13-246 (246)
102 2z3z_A Dipeptidyl aminopeptida 99.7 6.5E-16 2.2E-20 179.4 26.1 297 82-430 27-393 (706)
103 2h1i_A Carboxylesterase; struc 99.7 3.4E-16 1.2E-20 154.0 20.2 184 479-726 36-226 (226)
104 4fle_A Esterase; structural ge 99.7 2.9E-17 9.8E-22 158.9 12.1 189 481-728 2-195 (202)
105 1k8q_A Triacylglycerol lipase, 99.7 9.5E-17 3.3E-21 170.9 17.3 148 448-598 24-185 (377)
106 3g8y_A SUSD/RAGB-associated es 99.7 6.7E-17 2.3E-21 173.2 16.1 149 447-599 83-262 (391)
107 3i2k_A Cocaine esterase; alpha 99.7 3.3E-17 1.1E-21 184.1 14.2 140 450-600 8-149 (587)
108 2qru_A Uncharacterized protein 99.7 7.1E-16 2.4E-20 156.8 22.1 230 456-724 9-273 (274)
109 1tht_A Thioesterase; 2.10A {Vi 99.7 6.9E-16 2.3E-20 159.3 22.1 236 452-724 8-263 (305)
110 3nuz_A Putative acetyl xylan e 99.7 2E-17 6.9E-22 177.6 10.4 148 447-598 88-266 (398)
111 3pe7_A Oligogalacturonate lyas 99.7 4.1E-15 1.4E-19 159.1 27.9 308 86-429 43-385 (388)
112 3h2g_A Esterase; xanthomonas o 99.7 5.6E-16 1.9E-20 166.7 20.8 150 449-599 44-212 (397)
113 1z68_A Fibroblast activation p 99.7 1.6E-15 5.6E-20 176.5 26.1 281 107-429 38-394 (719)
114 3d59_A Platelet-activating fac 99.7 3.8E-16 1.3E-20 167.1 18.1 207 463-729 82-353 (383)
115 2ojh_A Uncharacterized protein 99.7 2.6E-14 8.9E-19 145.8 30.6 255 105-414 22-292 (297)
116 2qjw_A Uncharacterized protein 99.7 5.4E-16 1.8E-20 146.1 16.1 173 479-723 2-174 (176)
117 3c8d_A Enterochelin esterase; 99.7 4.5E-16 1.5E-20 166.7 17.0 223 450-726 167-398 (403)
118 2fx5_A Lipase; alpha-beta hydr 99.7 5.9E-16 2E-20 155.9 16.6 185 467-727 34-229 (258)
119 1xfd_A DIP, dipeptidyl aminope 99.7 9.9E-15 3.4E-19 169.9 28.5 284 107-429 39-396 (723)
120 2gzs_A IROE protein; enterobac 99.7 2.4E-15 8.1E-20 153.0 19.2 223 450-724 12-264 (278)
121 3ia2_A Arylesterase; alpha-bet 99.7 2E-15 6.8E-20 153.0 17.5 221 456-723 3-270 (271)
122 3guu_A Lipase A; protein struc 99.7 3.3E-15 1.1E-19 159.8 19.7 249 448-728 72-408 (462)
123 2y6u_A Peroxisomal membrane pr 99.6 7.1E-16 2.4E-20 165.9 14.8 239 456-727 25-346 (398)
124 1qlw_A Esterase; anisotropic r 99.6 2.5E-15 8.5E-20 157.1 18.2 203 464-728 49-323 (328)
125 3vdx_A Designed 16NM tetrahedr 99.6 1.7E-14 5.7E-19 157.7 25.3 235 453-727 5-281 (456)
126 2pl5_A Homoserine O-acetyltran 99.6 2.8E-15 9.4E-20 159.1 17.3 236 460-724 29-364 (366)
127 3kxp_A Alpha-(N-acetylaminomet 99.6 1.7E-15 5.8E-20 157.1 15.2 215 459-723 55-313 (314)
128 3c5m_A Oligogalacturonate lyas 99.6 9.4E-15 3.2E-19 156.5 21.1 300 87-430 44-386 (396)
129 3r0v_A Alpha/beta hydrolase fo 99.6 3.8E-15 1.3E-19 149.6 16.1 212 455-723 6-261 (262)
130 2qs9_A Retinoblastoma-binding 99.6 5.3E-15 1.8E-19 141.8 16.1 181 480-726 3-186 (194)
131 1uxo_A YDEN protein; hydrolase 99.6 8.4E-15 2.9E-19 140.1 17.1 183 480-727 3-188 (192)
132 3u1t_A DMMA haloalkane dehalog 99.6 3.4E-15 1.2E-19 153.7 15.4 222 460-729 17-300 (309)
133 3oos_A Alpha/beta hydrolase fa 99.6 3.1E-15 1.1E-19 151.3 14.9 118 459-597 10-127 (278)
134 3i1i_A Homoserine O-acetyltran 99.6 2.2E-15 7.4E-20 160.4 14.1 249 454-727 15-374 (377)
135 1imj_A CIB, CCG1-interacting f 99.6 6.3E-16 2.2E-20 150.1 8.9 192 459-724 14-208 (210)
136 1brt_A Bromoperoxidase A2; hal 99.6 1.8E-14 6.3E-19 146.5 19.8 226 458-723 9-276 (277)
137 1a8s_A Chloroperoxidase F; hal 99.6 3.4E-14 1.2E-18 144.0 21.7 118 456-595 3-121 (273)
138 1a8q_A Bromoperoxidase A1; hal 99.6 6.3E-14 2.2E-18 142.1 23.6 223 456-723 3-273 (274)
139 1l0q_A Surface layer protein; 99.6 7.7E-12 2.6E-16 133.7 40.5 242 134-429 34-276 (391)
140 3v48_A Aminohydrolase, putativ 99.6 5.1E-15 1.7E-19 150.0 14.2 209 479-726 13-261 (268)
141 3e0x_A Lipase-esterase related 99.6 5.6E-15 1.9E-19 146.5 13.4 186 479-705 14-230 (245)
142 3dqz_A Alpha-hydroxynitrIle ly 99.6 1.6E-14 5.3E-19 144.8 16.5 215 481-726 4-258 (258)
143 3i28_A Epoxide hydrolase 2; ar 99.6 2.3E-14 7.9E-19 161.0 19.7 125 451-595 237-361 (555)
144 3fob_A Bromoperoxidase; struct 99.6 7.4E-14 2.5E-18 142.4 21.6 117 457-595 12-129 (281)
145 4dnp_A DAD2; alpha/beta hydrol 99.6 7.9E-15 2.7E-19 147.7 13.8 210 480-724 19-268 (269)
146 3fsg_A Alpha/beta superfamily 99.6 1.8E-15 6.1E-20 152.7 8.9 220 460-727 9-270 (272)
147 3qit_A CURM TE, polyketide syn 99.6 1.2E-14 4E-19 147.5 14.8 122 459-598 11-132 (286)
148 1mtz_A Proline iminopeptidase; 99.6 1.9E-14 6.7E-19 147.5 16.6 122 459-597 12-133 (293)
149 1a88_A Chloroperoxidase L; hal 99.6 5.9E-14 2E-18 142.4 20.0 120 456-595 3-123 (275)
150 2ocg_A Valacyclovir hydrolase; 99.6 5.5E-14 1.9E-18 140.9 19.4 224 459-722 9-253 (254)
151 3o4h_A Acylamino-acid-releasin 99.6 9.4E-14 3.2E-18 157.3 23.7 240 134-426 24-274 (582)
152 1qe3_A PNB esterase, para-nitr 99.6 4.8E-16 1.6E-20 170.3 4.3 218 464-706 82-316 (489)
153 3hss_A Putative bromoperoxidas 99.6 9.5E-15 3.2E-19 149.5 13.7 207 479-724 41-290 (293)
154 1zoi_A Esterase; alpha/beta hy 99.6 6.2E-14 2.1E-18 142.4 19.4 120 456-595 4-124 (276)
155 3qvm_A OLEI00960; structural g 99.6 5.1E-15 1.8E-19 150.1 11.2 209 482-726 29-279 (282)
156 3sty_A Methylketone synthase 1 99.6 1.2E-14 4E-19 146.5 13.8 219 479-724 10-265 (267)
157 2yys_A Proline iminopeptidase- 99.6 4.2E-14 1.4E-18 144.7 18.1 230 455-724 6-275 (286)
158 1tqh_A Carboxylesterase precur 99.6 1.9E-14 6.4E-19 143.9 14.8 208 481-725 16-245 (247)
159 3om8_A Probable hydrolase; str 99.6 3.4E-14 1.2E-18 143.7 16.4 224 455-722 8-264 (266)
160 1ycd_A Hypothetical 27.3 kDa p 99.6 1.1E-14 3.8E-19 145.1 12.4 208 479-728 3-240 (243)
161 1q0r_A RDMC, aclacinomycin met 99.6 1.1E-13 3.9E-18 142.3 20.3 122 459-596 8-129 (298)
162 1iup_A META-cleavage product h 99.6 2.1E-14 7.3E-19 146.5 14.4 220 459-724 12-272 (282)
163 1wm1_A Proline iminopeptidase; 99.6 1E-13 3.5E-18 143.8 19.8 123 454-595 17-139 (317)
164 4g9e_A AHL-lactonase, alpha/be 99.6 4.5E-15 1.5E-19 150.4 8.9 232 452-728 4-272 (279)
165 2r11_A Carboxylesterase NP; 26 99.6 1E-13 3.5E-18 143.2 19.3 235 452-723 46-305 (306)
166 2xua_A PCAD, 3-oxoadipate ENOL 99.6 4.1E-14 1.4E-18 143.0 15.7 219 459-723 9-263 (266)
167 1j1i_A META cleavage compound 99.6 2.8E-14 9.6E-19 146.8 14.5 225 459-729 23-286 (296)
168 2b61_A Homoserine O-acetyltran 99.5 2.3E-14 8E-19 152.6 14.2 114 481-596 59-189 (377)
169 1hkh_A Gamma lactamase; hydrol 99.5 4.7E-14 1.6E-18 143.5 15.8 116 458-595 9-125 (279)
170 2ojh_A Uncharacterized protein 99.5 2.1E-12 7.3E-17 131.4 27.6 232 156-430 20-260 (297)
171 1k32_A Tricorn protease; prote 99.5 2.4E-12 8.3E-17 155.9 32.7 290 81-430 15-370 (1045)
172 3bdv_A Uncharacterized protein 99.5 9.6E-14 3.3E-18 132.6 15.9 174 479-727 15-189 (191)
173 2puj_A 2-hydroxy-6-OXO-6-pheny 99.5 5E-14 1.7E-18 144.1 14.5 213 480-724 32-285 (286)
174 3g9x_A Haloalkane dehalogenase 99.5 1.3E-14 4.6E-19 148.6 10.0 116 459-595 17-132 (299)
175 2xdw_A Prolyl endopeptidase; a 99.5 1.8E-12 6.3E-17 150.3 29.1 257 139-430 79-370 (710)
176 1azw_A Proline iminopeptidase; 99.5 2.4E-13 8.1E-18 140.8 18.9 123 454-595 14-136 (313)
177 3nwo_A PIP, proline iminopepti 99.5 1.3E-13 4.5E-18 144.1 17.0 126 459-595 35-160 (330)
178 2gop_A Trilobed protease; beta 99.5 4.5E-12 1.5E-16 133.2 28.4 236 132-425 15-290 (347)
179 3gff_A IROE-like serine hydrol 99.5 7E-14 2.4E-18 144.9 14.2 224 450-725 11-265 (331)
180 1c4x_A BPHD, protein (2-hydrox 99.5 9.7E-14 3.3E-18 141.8 14.9 233 458-724 13-284 (285)
181 2vat_A Acetyl-COA--deacetylcep 99.5 3.6E-14 1.2E-18 155.0 12.4 116 480-597 108-236 (444)
182 1u2e_A 2-hydroxy-6-ketonona-2, 99.5 2.2E-13 7.6E-18 139.4 17.2 212 482-723 37-287 (289)
183 3r40_A Fluoroacetate dehalogen 99.5 9.7E-14 3.3E-18 142.6 14.2 120 458-595 19-138 (306)
184 2qvb_A Haloalkane dehalogenase 99.5 5.9E-14 2E-18 143.6 11.9 121 458-597 14-135 (297)
185 3p2m_A Possible hydrolase; alp 99.5 7.5E-14 2.6E-18 145.9 12.8 212 481-723 81-328 (330)
186 2e3j_A Epoxide hydrolase EPHB; 99.5 2.5E-13 8.7E-18 143.6 16.7 123 458-596 9-131 (356)
187 2q0x_A Protein DUF1749, unchar 99.5 3.1E-13 1.1E-17 141.4 16.7 116 464-597 25-146 (335)
188 2cjp_A Epoxide hydrolase; HET: 99.5 3.2E-13 1.1E-17 141.0 16.4 120 458-594 17-137 (328)
189 2bkl_A Prolyl endopeptidase; m 99.5 3E-12 1E-16 148.1 25.8 254 138-429 74-352 (695)
190 4g56_B MGC81050 protein; prote 99.5 4.4E-12 1.5E-16 134.1 25.0 255 130-430 41-303 (357)
191 1mj5_A 1,3,4,6-tetrachloro-1,4 99.5 1.5E-13 5.3E-18 141.0 13.4 122 457-597 14-136 (302)
192 2rau_A Putative esterase; NP_3 99.5 1.1E-13 3.9E-18 146.0 12.5 114 479-594 48-178 (354)
193 3vgz_A Uncharacterized protein 99.5 2.6E-11 8.8E-16 127.4 30.5 249 134-430 43-305 (353)
194 2xmz_A Hydrolase, alpha/beta h 99.5 2.5E-13 8.4E-18 137.4 14.1 105 479-596 14-118 (269)
195 3ow8_A WD repeat-containing pr 99.5 1.2E-11 4.2E-16 128.6 27.3 238 131-426 80-319 (321)
196 3azo_A Aminopeptidase; POP fam 99.5 5E-12 1.7E-16 145.5 26.8 262 133-430 25-327 (662)
197 3kda_A CFTR inhibitory factor 99.5 2.2E-13 7.7E-18 139.7 13.6 115 458-595 16-131 (301)
198 3bf7_A Esterase YBFF; thioeste 99.5 5E-13 1.7E-17 134.0 15.3 204 480-724 15-254 (255)
199 1isp_A Lipase; alpha/beta hydr 99.5 8.9E-13 3E-17 124.6 16.1 169 481-725 3-176 (181)
200 2wue_A 2-hydroxy-6-OXO-6-pheny 99.5 5.2E-13 1.8E-17 136.9 15.5 214 479-723 34-288 (291)
201 3bwx_A Alpha/beta hydrolase; Y 99.5 1.5E-12 5.3E-17 132.7 18.7 123 452-592 6-128 (285)
202 4gqb_B Methylosome protein 50; 99.5 3.2E-11 1.1E-15 126.6 29.0 253 132-430 31-291 (344)
203 1wom_A RSBQ, sigma factor SIGB 99.5 5.8E-13 2E-17 134.9 14.6 210 481-726 20-271 (271)
204 1xkl_A SABP2, salicylic acid-b 99.4 1.4E-12 4.7E-17 132.3 17.3 215 481-726 4-260 (273)
205 2xt0_A Haloalkane dehalogenase 99.4 7.1E-13 2.4E-17 136.3 15.4 117 463-595 33-149 (297)
206 2wfl_A Polyneuridine-aldehyde 99.4 1.3E-12 4.4E-17 131.8 17.0 105 479-595 8-113 (264)
207 1b6g_A Haloalkane dehalogenase 99.4 4.8E-13 1.6E-17 138.5 14.1 117 463-595 34-150 (310)
208 2qmq_A Protein NDRG2, protein 99.4 2E-13 6.7E-18 139.4 10.9 125 460-596 19-146 (286)
209 3afi_E Haloalkane dehalogenase 99.4 1.8E-12 6.2E-17 134.5 18.0 115 459-594 14-128 (316)
210 3fla_A RIFR; alpha-beta hydrol 99.4 4.8E-13 1.7E-17 134.7 12.8 208 478-726 17-250 (267)
211 3vgz_A Uncharacterized protein 99.4 2.3E-10 7.9E-15 120.0 34.0 227 135-414 92-334 (353)
212 1k32_A Tricorn protease; prote 99.4 2E-11 6.8E-16 147.9 29.2 264 82-413 205-491 (1045)
213 4fol_A FGH, S-formylglutathion 99.4 4.4E-13 1.5E-17 136.5 12.1 251 450-728 13-298 (299)
214 2ynn_A Coatomer subunit beta'; 99.4 1.5E-10 5.1E-15 119.2 31.0 241 133-430 15-261 (304)
215 3pic_A CIP2; alpha/beta hydrol 99.4 1E-11 3.5E-16 126.5 21.5 117 463-597 90-220 (375)
216 4gqb_B Methylosome protein 50; 99.4 2.9E-11 1E-15 126.9 25.4 239 134-429 85-332 (344)
217 3iuj_A Prolyl endopeptidase; h 99.4 3.4E-11 1.1E-15 139.1 28.2 259 88-390 138-412 (693)
218 1m33_A BIOH protein; alpha-bet 99.4 8.5E-13 2.9E-17 132.5 13.0 96 481-595 12-108 (258)
219 1got_B GT-beta; complex (GTP-b 99.4 1.9E-10 6.5E-15 120.5 31.5 244 132-430 56-303 (340)
220 1pja_A Palmitoyl-protein thioe 99.4 2.1E-12 7E-17 133.0 15.9 104 478-596 33-139 (302)
221 1ukc_A ESTA, esterase; fungi, 99.4 2.6E-13 9E-18 149.7 9.5 229 465-705 86-327 (522)
222 1yr2_A Prolyl oligopeptidase; 99.4 3.5E-11 1.2E-15 140.2 27.8 255 138-429 113-396 (741)
223 4h5i_A Guanine nucleotide-exch 99.4 7.8E-11 2.7E-15 124.8 27.6 205 134-381 136-342 (365)
224 4g4g_A 4-O-methyl-glucuronoyl 99.4 1.4E-11 4.8E-16 126.7 20.7 116 463-597 123-254 (433)
225 3c6x_A Hydroxynitrilase; atomi 99.4 2.5E-12 8.4E-17 129.2 15.1 213 481-724 3-255 (257)
226 1ehy_A Protein (soluble epoxid 99.4 1.3E-11 4.5E-16 126.5 20.5 117 459-594 16-132 (294)
227 1pby_B Quinohemoprotein amine 99.4 1.2E-10 4.1E-15 121.1 28.0 247 135-430 37-312 (337)
228 2d81_A PHB depolymerase; alpha 99.4 5.8E-13 2E-17 136.4 9.8 150 557-726 7-176 (318)
229 3ibt_A 1H-3-hydroxy-4-oxoquino 99.4 3.6E-12 1.2E-16 127.9 15.3 116 460-596 7-123 (264)
230 2psd_A Renilla-luciferin 2-mon 99.4 3.4E-12 1.2E-16 132.6 14.4 116 459-594 28-144 (318)
231 1gxr_A ESG1, transducin-like e 99.4 4.9E-10 1.7E-14 116.4 30.6 238 134-430 54-298 (337)
232 3zwl_B Eukaryotic translation 99.4 6.9E-10 2.4E-14 116.8 31.9 242 132-413 33-279 (369)
233 3hfq_A Uncharacterized protein 99.4 7E-10 2.4E-14 116.3 31.6 258 135-437 43-326 (347)
234 3zwl_B Eukaryotic translation 99.4 2E-09 6.9E-14 113.2 35.2 251 132-429 75-347 (369)
235 3s25_A Hypothetical 7-bladed b 99.4 1E-09 3.4E-14 112.0 31.3 266 84-428 19-293 (302)
236 3b12_A Fluoroacetate dehalogen 99.0 6.3E-14 2.2E-18 143.8 0.0 120 460-597 13-132 (304)
237 3u4y_A Uncharacterized protein 99.4 9E-10 3.1E-14 114.5 31.5 247 136-429 44-305 (331)
238 1vyh_C Platelet-activating fac 99.3 3.4E-10 1.2E-14 121.9 29.0 242 131-430 108-371 (410)
239 1gxr_A ESG1, transducin-like e 99.3 5.9E-10 2E-14 115.8 29.7 234 132-425 98-334 (337)
240 2vdu_B TRNA (guanine-N(7)-)-me 99.3 4.9E-10 1.7E-14 122.3 30.1 245 133-430 104-395 (450)
241 1nr0_A Actin interacting prote 99.3 2.6E-10 9E-15 129.7 28.9 241 136-430 23-272 (611)
242 1erj_A Transcriptional repress 99.3 7.2E-10 2.5E-14 118.6 30.7 240 134-430 67-343 (393)
243 3l80_A Putative uncharacterize 99.3 1.1E-12 3.8E-17 134.1 7.4 102 481-595 41-144 (292)
244 3bws_A Protein LP49; two-domai 99.3 1.3E-09 4.4E-14 118.0 32.2 245 131-427 169-431 (433)
245 3u4y_A Uncharacterized protein 99.3 6E-10 2E-14 115.9 28.4 242 137-430 3-254 (331)
246 4ery_A WD repeat-containing pr 99.3 3.2E-09 1.1E-13 109.4 33.5 226 132-409 66-295 (312)
247 1nir_A Nitrite reductase; hemo 99.3 1.8E-09 6.1E-14 120.5 33.7 287 134-469 181-497 (543)
248 4ery_A WD repeat-containing pr 99.3 1.8E-09 6.1E-14 111.4 31.4 242 132-430 24-270 (312)
249 3mkq_A Coatomer beta'-subunit; 99.3 5.7E-10 1.9E-14 131.4 30.7 242 133-430 15-261 (814)
250 3ow8_A WD repeat-containing pr 99.3 3.8E-10 1.3E-14 117.2 25.4 241 132-430 33-281 (321)
251 3qmv_A Thioesterase, REDJ; alp 99.3 1.5E-12 5E-17 132.6 6.8 187 482-706 52-264 (280)
252 3s25_A Hypothetical 7-bladed b 99.3 9.9E-10 3.4E-14 112.1 27.7 225 87-385 61-295 (302)
253 1r3d_A Conserved hypothetical 99.3 2.1E-11 7.2E-16 122.8 15.1 103 481-595 16-121 (264)
254 1l0q_A Surface layer protein; 99.3 2E-09 6.8E-14 114.8 31.1 223 158-430 12-235 (391)
255 1nr0_A Actin interacting prote 99.3 1.5E-09 5.1E-14 123.5 31.4 246 132-430 60-357 (611)
256 3bws_A Protein LP49; two-domai 99.3 9.7E-10 3.3E-14 119.0 27.6 244 136-430 127-392 (433)
257 2xe4_A Oligopeptidase B; hydro 99.3 1E-09 3.5E-14 127.5 29.4 250 140-426 123-398 (751)
258 4i19_A Epoxide hydrolase; stru 99.3 1.7E-10 5.7E-15 122.9 20.8 122 458-596 74-204 (388)
259 1vyh_C Platelet-activating fac 99.3 8.7E-10 3E-14 118.7 26.8 225 131-409 150-396 (410)
260 2vdu_B TRNA (guanine-N(7)-)-me 99.3 2.5E-09 8.6E-14 116.6 30.5 201 180-426 105-337 (450)
261 2pbi_B Guanine nucleotide-bind 99.3 1.7E-09 5.9E-14 113.9 28.1 242 132-430 65-317 (354)
262 1thg_A Lipase; hydrolase(carbo 99.3 4.2E-12 1.4E-16 140.7 8.1 227 465-705 106-359 (544)
263 2pm9_A Protein WEB1, protein t 99.3 2.5E-10 8.4E-15 122.8 21.5 262 134-430 15-296 (416)
264 3vl1_A 26S proteasome regulato 99.3 1.8E-09 6E-14 116.4 28.1 240 136-430 61-324 (420)
265 4g56_B MGC81050 protein; prote 99.3 3.2E-10 1.1E-14 119.6 21.4 241 133-429 96-344 (357)
266 1llf_A Lipase 3; candida cylin 99.2 1.2E-12 4.2E-17 144.6 2.3 227 465-705 98-346 (534)
267 1got_B GT-beta; complex (GTP-b 99.2 4.8E-09 1.6E-13 109.8 29.2 224 133-409 99-328 (340)
268 2ynn_A Coatomer subunit beta'; 99.2 1.5E-09 5.2E-14 111.6 24.7 223 133-408 57-285 (304)
269 2ymu_A WD-40 repeat protein; u 99.2 2E-09 7E-14 121.2 27.7 219 133-409 346-565 (577)
270 1jmx_B Amine dehydrogenase; ox 99.2 1E-09 3.4E-14 114.8 23.4 243 136-430 4-327 (349)
271 3ei3_B DNA damage-binding prot 99.2 2.7E-09 9.3E-14 113.4 27.1 243 134-430 76-341 (383)
272 1k8k_C P40, ARP2/3 complex 41 99.2 2.8E-09 9.6E-14 112.5 26.8 241 134-428 11-274 (372)
273 2ymu_A WD-40 repeat protein; u 99.2 4.6E-09 1.6E-13 118.3 30.0 234 132-427 304-538 (577)
274 3fm0_A Protein CIAO1; WDR39,SG 99.2 1.4E-09 4.8E-14 114.1 23.7 227 134-409 19-268 (345)
275 4h5i_A Guanine nucleotide-exch 99.2 8.1E-10 2.8E-14 117.0 22.0 243 138-429 78-344 (365)
276 1erj_A Transcriptional repress 99.2 5.1E-09 1.7E-13 112.0 27.8 216 133-403 125-362 (393)
277 4aez_A CDC20, WD repeat-contai 99.2 7.9E-09 2.7E-13 110.8 28.7 241 133-430 136-382 (401)
278 2wj6_A 1H-3-hydroxy-4-oxoquina 99.2 3.8E-11 1.3E-15 121.9 9.6 116 459-594 11-127 (276)
279 1nir_A Nitrite reductase; hemo 99.2 1.7E-08 6E-13 112.4 31.9 251 134-430 224-516 (543)
280 2pm9_A Protein WEB1, protein t 99.2 6.1E-10 2.1E-14 119.7 19.5 250 132-430 68-339 (416)
281 1pgu_A Actin interacting prote 99.2 4.1E-09 1.4E-13 119.5 27.0 244 134-430 21-285 (615)
282 1ri6_A Putative isomerase YBHE 99.2 9.4E-09 3.2E-13 106.9 27.7 249 135-430 41-312 (343)
283 3scy_A Hypothetical bacterial 99.2 4.8E-08 1.7E-12 102.8 33.5 260 136-430 54-341 (361)
284 3qyj_A ALR0039 protein; alpha/ 99.2 2.2E-10 7.4E-15 117.2 14.7 117 459-593 12-128 (291)
285 1r5m_A SIR4-interacting protei 99.2 6.6E-09 2.3E-13 111.6 27.2 236 134-430 48-321 (425)
286 1r5m_A SIR4-interacting protei 99.2 1E-08 3.4E-13 110.1 28.3 239 132-429 109-362 (425)
287 2ogt_A Thermostable carboxyles 99.2 6.3E-12 2.2E-16 137.9 3.0 221 458-706 81-316 (498)
288 3fle_A SE_1780 protein; struct 99.2 3.3E-10 1.1E-14 112.0 14.9 212 481-722 6-247 (249)
289 3mkq_A Coatomer beta'-subunit; 99.2 4.3E-09 1.5E-13 123.9 27.0 226 133-411 57-288 (814)
290 2xzm_R RACK1; ribosome, transl 99.2 7.8E-09 2.7E-13 108.2 25.8 240 131-429 76-341 (343)
291 2h7c_A Liver carboxylesterase 99.1 4.6E-11 1.6E-15 132.5 8.9 133 458-598 95-234 (542)
292 2pbi_B Guanine nucleotide-bind 99.1 1.3E-08 4.6E-13 107.0 27.5 224 134-409 109-342 (354)
293 4gga_A P55CDC, cell division c 99.1 4.2E-08 1.4E-12 105.8 32.0 248 132-429 148-396 (420)
294 3frx_A Guanine nucleotide-bind 99.1 5.9E-08 2E-12 100.4 31.6 239 130-429 16-268 (319)
295 3vl1_A 26S proteasome regulato 99.1 7.7E-09 2.6E-13 111.3 25.7 242 131-427 139-418 (420)
296 3f3f_A Nucleoporin SEH1; struc 99.1 4.9E-08 1.7E-12 101.3 31.0 250 130-430 10-339 (351)
297 3frx_A Guanine nucleotide-bind 99.1 2.1E-08 7.2E-13 103.8 27.4 237 131-428 65-317 (319)
298 1sq9_A Antiviral protein SKI8; 99.1 4.5E-09 1.5E-13 112.1 22.7 248 133-429 64-396 (397)
299 3iz6_a 40S ribosomal protein R 99.1 8.3E-09 2.8E-13 109.8 24.3 264 132-429 67-376 (380)
300 3fm0_A Protein CIAO1; WDR39,SG 99.1 1.6E-08 5.5E-13 105.9 25.9 251 130-429 60-336 (345)
301 3jrp_A Fusion protein of prote 99.1 2.7E-08 9.3E-13 104.9 27.8 245 131-429 11-288 (379)
302 3dwl_C Actin-related protein 2 99.1 4.4E-10 1.5E-14 119.2 13.8 227 134-409 14-267 (377)
303 3ds8_A LIN2722 protein; unkonw 99.1 4.2E-10 1.4E-14 112.5 12.9 154 542-726 77-243 (254)
304 1jof_A Carboxy-CIS,CIS-muconat 99.1 2E-08 6.7E-13 106.2 25.9 258 135-429 43-342 (365)
305 3i2n_A WD repeat-containing pr 99.1 1.5E-08 5E-13 106.2 24.5 245 133-429 20-292 (357)
306 2j04_A TAU60, YPL007P, hypothe 99.1 6.7E-09 2.3E-13 112.9 22.0 182 180-412 88-286 (588)
307 2j04_A TAU60, YPL007P, hypothe 99.1 1.2E-08 4E-13 111.1 23.5 193 132-378 86-295 (588)
308 1yfq_A Cell cycle arrest prote 99.1 1.5E-08 5.1E-13 105.5 23.3 240 132-430 12-284 (342)
309 1sq9_A Antiviral protein SKI8; 99.1 5.8E-08 2E-12 103.4 28.3 251 132-430 17-324 (397)
310 3c5v_A PME-1, protein phosphat 99.1 1.7E-09 5.9E-14 111.9 15.5 101 480-594 37-144 (316)
311 3ei3_B DNA damage-binding prot 99.1 8.4E-08 2.9E-12 101.8 29.1 245 131-428 118-382 (383)
312 3g4e_A Regucalcin; six bladed 99.1 9.6E-08 3.3E-12 97.7 28.3 232 135-415 16-263 (297)
313 1jmx_B Amine dehydrogenase; ox 99.1 3.5E-08 1.2E-12 102.9 25.4 223 135-392 46-335 (349)
314 3dm0_A Maltose-binding peripla 99.0 2E-08 6.9E-13 115.9 25.7 239 131-427 430-692 (694)
315 3hfq_A Uncharacterized protein 99.0 7E-08 2.4E-12 100.9 27.7 210 135-385 89-322 (347)
316 1pby_B Quinohemoprotein amine 99.0 1.2E-08 4.2E-13 105.8 21.3 222 159-430 12-271 (337)
317 4e54_B DNA damage-binding prot 99.0 5.9E-09 2E-13 113.2 19.5 248 133-430 121-389 (435)
318 3g02_A Epoxide hydrolase; alph 99.0 5.8E-09 2E-13 111.4 18.7 120 460-595 93-219 (408)
319 2pm7_B Protein transport prote 99.0 1.4E-07 4.8E-12 96.4 28.1 229 132-410 10-271 (297)
320 3scy_A Hypothetical bacterial 99.0 3E-07 1E-11 96.7 31.5 250 89-385 60-342 (361)
321 1k8k_C P40, ARP2/3 complex 41 99.0 4.7E-08 1.6E-12 103.0 25.1 212 133-382 54-274 (372)
322 4ggc_A P55CDC, cell division c 99.0 2.8E-07 9.6E-12 94.6 30.3 246 132-428 68-315 (318)
323 2ha2_A ACHE, acetylcholinester 99.0 2.2E-10 7.6E-15 127.0 7.1 131 458-596 93-232 (543)
324 3e5z_A Putative gluconolactona 99.0 6.3E-08 2.2E-12 98.9 25.0 239 134-430 30-288 (296)
325 2ghs_A AGR_C_1268P; regucalcin 99.0 4.6E-07 1.6E-11 94.0 31.8 241 117-415 40-293 (326)
326 1ea5_A ACHE, acetylcholinester 99.0 2.4E-10 8.2E-15 126.5 7.1 225 458-704 91-331 (537)
327 2dg1_A DRP35, lactonase; beta 99.0 4E-07 1.4E-11 94.4 31.3 252 134-428 47-316 (333)
328 2xzm_R RACK1; ribosome, transl 99.0 1.6E-07 5.3E-12 98.2 27.9 236 133-430 23-287 (343)
329 2aq5_A Coronin-1A; WD40 repeat 99.0 2.4E-08 8.2E-13 107.0 21.9 247 130-429 80-343 (402)
330 3i2n_A WD repeat-containing pr 99.0 3.1E-08 1.1E-12 103.6 22.3 242 133-429 67-354 (357)
331 3dw8_B Serine/threonine-protei 99.0 6.9E-08 2.4E-12 104.6 25.6 243 133-430 30-375 (447)
332 3dm0_A Maltose-binding peripla 99.0 7.7E-08 2.6E-12 111.0 27.4 242 130-430 381-634 (694)
333 4aow_A Guanine nucleotide-bind 99.0 3.4E-07 1.2E-11 94.9 29.9 243 129-429 36-287 (340)
334 2aq5_A Coronin-1A; WD40 repeat 99.0 8.7E-08 3E-12 102.5 25.9 245 136-430 39-301 (402)
335 3k26_A Polycomb protein EED; W 99.0 2.1E-08 7.1E-13 105.3 20.6 250 133-427 71-365 (366)
336 3ils_A PKS, aflatoxin biosynth 99.0 1.7E-09 5.8E-14 108.8 11.4 100 479-594 19-121 (265)
337 1ri6_A Putative isomerase YBHE 99.0 5.3E-08 1.8E-12 101.2 23.0 210 134-385 86-313 (343)
338 1kez_A Erythronolide synthase; 99.0 1.5E-09 5E-14 111.5 10.6 206 478-726 64-282 (300)
339 2hes_X YDR267CP; beta-propelle 99.0 8.3E-08 2.8E-12 99.8 24.1 246 131-427 58-327 (330)
340 3mmy_A MRNA export factor; mRN 99.0 1.5E-07 5E-12 98.7 26.2 239 130-412 38-334 (368)
341 4gga_A P55CDC, cell division c 99.0 7.1E-07 2.4E-11 96.1 31.8 253 118-430 94-355 (420)
342 3lcr_A Tautomycetin biosynthet 99.0 8.7E-09 3E-13 106.6 15.9 208 479-727 79-304 (319)
343 1qks_A Cytochrome CD1 nitrite 98.9 2.2E-06 7.6E-11 95.4 36.0 248 135-429 200-478 (567)
344 3k26_A Polycomb protein EED; W 98.9 1.1E-07 3.7E-12 99.7 24.2 243 131-430 18-320 (366)
345 2fj0_A JuvenIle hormone estera 98.9 1E-09 3.5E-14 121.8 8.5 125 465-596 91-233 (551)
346 2mad_H Methylamine dehydrogena 98.9 4.4E-07 1.5E-11 95.8 28.4 266 138-430 27-352 (373)
347 3sfz_A APAF-1, apoptotic pepti 98.9 7E-08 2.4E-12 119.3 25.6 253 131-427 657-912 (1249)
348 1p0i_A Cholinesterase; serine 98.9 2E-09 7E-14 119.0 10.6 127 465-597 93-228 (529)
349 2oiz_A Aromatic amine dehydrog 98.9 3.9E-07 1.3E-11 95.9 27.8 267 140-438 12-342 (361)
350 4a11_B DNA excision repair pro 98.9 3.2E-07 1.1E-11 97.7 27.5 201 132-384 44-278 (408)
351 2j04_B YDR362CP, TAU91; beta p 98.9 3.2E-08 1.1E-12 109.6 19.7 248 134-429 136-429 (524)
352 3sfz_A APAF-1, apoptotic pepti 98.9 6.2E-08 2.1E-12 119.7 24.6 245 131-430 615-873 (1249)
353 1tca_A Lipase; hydrolase(carbo 98.9 9.7E-09 3.3E-13 105.8 14.5 120 463-597 14-136 (317)
354 1yfq_A Cell cycle arrest prote 98.9 3.1E-07 1.1E-11 95.4 26.3 223 133-412 58-311 (342)
355 3odt_A Protein DOA1; ubiquitin 98.9 2.6E-06 8.9E-11 86.9 32.6 234 133-430 20-257 (313)
356 4aez_A CDC20, WD repeat-contai 98.9 8.5E-07 2.9E-11 94.8 29.9 238 134-429 96-337 (401)
357 2k2q_B Surfactin synthetase th 98.9 1.1E-09 3.7E-14 108.6 6.5 92 479-586 11-109 (242)
358 3lp5_A Putative cell surface h 98.9 2.4E-08 8.1E-13 98.7 16.0 200 481-724 4-233 (250)
359 1gpl_A RP2 lipase; serine este 98.9 2.7E-09 9.4E-14 114.8 10.0 113 479-596 68-181 (432)
360 3gre_A Serine/threonine-protei 98.9 1.7E-07 5.7E-12 101.5 23.3 244 132-430 64-361 (437)
361 1pgu_A Actin interacting prote 98.9 2.7E-07 9.3E-12 104.3 26.0 241 134-429 67-329 (615)
362 3jro_A Fusion protein of prote 98.9 9.1E-08 3.1E-12 111.4 22.4 245 130-428 8-285 (753)
363 2oiz_A Aromatic amine dehydrog 98.9 6.7E-07 2.3E-11 94.1 26.8 92 308-406 260-360 (361)
364 3sjl_D Methylamine dehydrogena 98.9 3.1E-06 1.1E-10 88.5 30.9 245 136-430 82-365 (386)
365 2bce_A Cholesterol esterase; h 98.9 3.6E-09 1.2E-13 117.6 9.2 133 457-596 76-223 (579)
366 4aow_A Guanine nucleotide-bind 98.9 5.7E-07 2E-11 93.2 25.4 242 132-430 87-339 (340)
367 2xyi_A Probable histone-bindin 98.9 4.2E-07 1.4E-11 98.3 25.2 246 134-428 131-410 (430)
368 3odt_A Protein DOA1; ubiquitin 98.8 1.7E-06 5.9E-11 88.2 28.6 231 133-430 61-298 (313)
369 2oaj_A Protein SNI1; WD40 repe 98.8 5.9E-07 2E-11 106.4 28.0 208 133-386 19-246 (902)
370 1dx4_A ACHE, acetylcholinester 98.8 7.6E-09 2.6E-13 115.6 10.9 117 478-596 138-267 (585)
371 2hes_X YDR267CP; beta-propelle 98.8 1.2E-06 4E-11 91.0 26.9 244 133-429 16-281 (330)
372 3v7d_B Cell division control p 98.8 1.9E-06 6.4E-11 93.9 29.4 244 139-430 128-383 (464)
373 4ggc_A P55CDC, cell division c 98.8 4.4E-06 1.5E-10 85.5 30.3 254 118-430 14-275 (318)
374 3bg1_A Protein SEC13 homolog; 98.8 1.2E-07 4.1E-12 97.9 17.6 241 131-427 13-292 (316)
375 3vu4_A KMHSV2; beta-propeller 98.8 2.4E-06 8.1E-11 89.7 27.7 233 133-429 21-272 (355)
376 3dw8_B Serine/threonine-protei 98.8 5.3E-07 1.8E-11 97.6 22.9 205 134-385 96-376 (447)
377 3c75_H MADH, methylamine dehyd 98.8 2.6E-06 9E-11 90.6 27.4 264 139-430 80-404 (426)
378 3dr2_A Exported gluconolactona 98.8 1.2E-06 4.2E-11 89.7 24.1 239 134-426 47-304 (305)
379 2mad_H Methylamine dehydrogena 98.8 4E-06 1.4E-10 88.5 28.4 77 308-388 273-356 (373)
380 3dwl_C Actin-related protein 2 98.7 9.7E-08 3.3E-12 101.0 15.5 212 131-381 55-280 (377)
381 3bix_A Neuroligin-1, neuroligi 98.7 3E-08 1E-12 110.5 10.8 126 465-595 112-248 (574)
382 3lrv_A PRE-mRNA-splicing facto 98.7 1.8E-06 6.1E-11 90.1 23.8 241 138-429 43-293 (343)
383 1jof_A Carboxy-CIS,CIS-muconat 98.7 1.1E-06 3.7E-11 92.7 21.8 212 136-382 87-341 (365)
384 3v7d_B Cell division control p 98.7 1.3E-05 4.4E-10 87.2 31.0 239 131-430 162-423 (464)
385 1ei9_A Palmitoyl protein thioe 98.7 2.7E-07 9.2E-12 93.1 16.1 105 482-594 6-114 (279)
386 3dsm_A Uncharacterized protein 98.7 5.3E-06 1.8E-10 85.9 26.0 238 142-430 52-303 (328)
387 4e54_B DNA damage-binding prot 98.7 2.5E-07 8.5E-12 100.2 15.8 206 134-385 212-433 (435)
388 2oaj_A Protein SNI1; WD40 repe 98.7 1.7E-06 6E-11 102.4 24.1 241 134-430 438-785 (902)
389 1bu8_A Protein (pancreatic lip 98.7 4.7E-08 1.6E-12 105.5 9.5 114 478-596 67-181 (452)
390 3jrp_A Fusion protein of prote 98.6 5.4E-06 1.9E-10 87.0 25.4 206 132-383 56-288 (379)
391 1w52_X Pancreatic lipase relat 98.6 7.7E-08 2.6E-12 103.8 10.1 114 478-596 67-181 (452)
392 1qks_A Cytochrome CD1 nitrite 98.6 1.7E-05 5.9E-10 88.2 29.1 238 137-428 159-421 (567)
393 3gre_A Serine/threonine-protei 98.6 5.2E-06 1.8E-10 89.5 24.4 209 132-391 112-368 (437)
394 1ex9_A Lactonizing lipase; alp 98.6 1.1E-07 3.7E-12 96.5 10.0 101 479-595 5-108 (285)
395 1ys1_X Lipase; CIS peptide Leu 98.6 1.5E-07 5.1E-12 96.8 11.0 104 479-595 6-113 (320)
396 2ovr_B FBW7, F-BOX/WD repeat p 98.6 3.3E-05 1.1E-09 83.5 30.3 234 134-428 202-442 (445)
397 3sjl_D Methylamine dehydrogena 98.6 6.8E-06 2.3E-10 85.9 23.1 246 138-430 39-322 (386)
398 3icv_A Lipase B, CALB; circula 98.6 2.3E-07 7.8E-12 93.9 11.5 116 467-597 52-170 (316)
399 4gq1_A NUP37; propeller, trans 98.6 1.4E-06 4.8E-11 92.9 18.3 237 137-411 95-377 (393)
400 2cb9_A Fengycin synthetase; th 98.6 4.5E-07 1.5E-11 89.7 13.2 194 479-725 20-225 (244)
401 3c75_H MADH, methylamine dehyd 98.5 3.2E-05 1.1E-09 82.2 27.3 78 308-389 325-409 (426)
402 2j04_B YDR362CP, TAU91; beta p 98.5 2.8E-06 9.7E-11 93.8 19.9 220 134-408 210-458 (524)
403 2xyi_A Probable histone-bindin 98.5 2.3E-05 8E-10 84.4 26.2 208 180-428 131-353 (430)
404 3iz6_a 40S ribosomal protein R 98.5 2.4E-06 8.2E-11 90.6 18.0 200 133-382 159-375 (380)
405 4a11_B DNA excision repair pro 98.5 1.2E-05 4.3E-10 85.2 23.7 118 130-279 98-219 (408)
406 1hpl_A Lipase; hydrolase(carbo 98.5 1.2E-07 4.2E-12 101.6 7.7 113 478-595 66-179 (449)
407 3n2z_B Lysosomal Pro-X carboxy 98.5 4.7E-07 1.6E-11 96.8 11.7 113 480-594 38-159 (446)
408 3dsm_A Uncharacterized protein 98.5 3.4E-05 1.2E-09 79.8 25.6 228 147-430 4-255 (328)
409 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 3.1E-05 1E-09 79.2 25.0 247 135-428 21-299 (314)
410 1p22_A F-BOX/WD-repeat protein 98.5 6.3E-05 2.2E-09 81.0 28.6 228 138-429 138-366 (435)
411 2pm7_B Protein transport prote 98.4 3.5E-05 1.2E-09 78.4 24.1 206 131-381 53-284 (297)
412 1rp1_A Pancreatic lipase relat 98.4 3.5E-07 1.2E-11 98.2 8.9 112 478-595 67-179 (450)
413 2dst_A Hypothetical protein TT 98.4 9.8E-07 3.4E-11 77.8 10.4 97 458-585 8-104 (131)
414 3f3f_A Nucleoporin SEH1; struc 98.4 1E-05 3.4E-10 83.5 20.0 107 132-262 58-190 (351)
415 1npe_A Nidogen, entactin; glyc 98.4 0.00015 5.2E-09 72.3 28.0 207 134-391 38-247 (267)
416 1mda_H Methylamine dehydrogena 98.4 2.1E-05 7E-10 82.3 22.0 260 142-430 30-348 (368)
417 3fvz_A Peptidyl-glycine alpha- 98.4 0.00022 7.7E-09 73.5 29.2 247 134-427 26-321 (329)
418 1jmk_C SRFTE, surfactin synthe 98.4 1.3E-06 4.4E-11 85.4 11.0 90 480-595 16-108 (230)
419 2x5x_A PHB depolymerase PHAZ7; 98.4 1E-06 3.5E-11 91.0 10.4 110 480-596 39-165 (342)
420 3hrp_A Uncharacterized protein 98.4 0.00018 6.1E-09 76.8 27.9 203 133-385 132-357 (409)
421 4gq1_A NUP37; propeller, trans 98.3 1E-05 3.5E-10 86.1 17.5 211 129-371 134-381 (393)
422 2w18_A PALB2, fancn, partner a 98.3 0.00011 3.9E-09 74.8 24.0 220 132-380 112-355 (356)
423 2ovr_B FBW7, F-BOX/WD repeat p 98.3 0.0026 9E-08 68.3 35.3 229 133-430 161-393 (445)
424 3jro_A Fusion protein of prote 98.3 1.7E-05 5.7E-10 92.3 18.3 207 132-384 54-287 (753)
425 1mda_H Methylamine dehydrogena 98.2 8.3E-05 2.8E-09 77.7 21.5 80 308-392 270-356 (368)
426 2hfk_A Pikromycin, type I poly 98.2 1.1E-06 3.7E-11 90.8 7.0 209 483-727 91-313 (319)
427 3mmy_A MRNA export factor; mRN 98.2 7.3E-05 2.5E-09 77.8 21.3 61 133-198 88-150 (368)
428 3lrv_A PRE-mRNA-splicing facto 98.2 0.00018 6.3E-09 74.6 24.0 179 159-383 105-293 (343)
429 2zyr_A Lipase, putative; fatty 98.2 1.2E-06 4E-11 93.6 6.9 113 479-597 20-167 (484)
430 1npe_A Nidogen, entactin; glyc 98.2 0.0023 7.8E-08 63.6 31.0 231 143-430 1-240 (267)
431 1p22_A F-BOX/WD-repeat protein 98.2 0.00082 2.8E-08 72.2 29.4 229 134-429 176-415 (435)
432 3vu4_A KMHSV2; beta-propeller 98.2 0.00059 2E-08 71.2 26.7 204 135-383 62-272 (355)
433 2iwa_A Glutamine cyclotransfer 98.2 0.00025 8.6E-09 70.0 21.7 198 181-428 24-237 (266)
434 2oit_A Nucleoporin 214KDA; NH2 98.2 5.2E-05 1.8E-09 81.8 18.2 116 133-277 94-222 (434)
435 3tej_A Enterobactin synthase c 98.1 1.1E-05 3.6E-10 83.7 12.1 102 479-596 99-204 (329)
436 3e5z_A Putative gluconolactona 98.1 0.00061 2.1E-08 68.9 25.1 192 181-428 31-246 (296)
437 2p4o_A Hypothetical protein; p 98.1 0.0022 7.7E-08 65.2 29.3 237 134-414 34-278 (306)
438 3g4e_A Regucalcin; six bladed 98.1 0.001 3.6E-08 67.3 25.3 194 181-430 16-231 (297)
439 3no2_A Uncharacterized protein 98.1 0.00086 2.9E-08 67.2 23.9 218 157-429 14-253 (276)
440 1rwi_B Serine/threonine-protei 98.1 0.0012 4.1E-08 65.4 24.8 236 134-428 26-264 (270)
441 3sov_A LRP-6, low-density lipo 98.0 0.014 4.8E-07 59.5 33.1 222 158-430 13-240 (318)
442 2iwa_A Glutamine cyclotransfer 98.0 0.00098 3.3E-08 65.7 22.5 193 135-381 24-236 (266)
443 3v65_B Low-density lipoprotein 98.0 0.0074 2.5E-07 63.6 30.3 206 134-390 118-326 (386)
444 3v65_B Low-density lipoprotein 98.0 0.0075 2.6E-07 63.5 30.1 220 159-430 97-320 (386)
445 3v64_C Agrin; beta propeller, 98.0 0.0098 3.4E-07 61.7 30.3 220 159-430 54-277 (349)
446 2hih_A Lipase 46 kDa form; A1 97.9 3.3E-05 1.1E-09 82.0 11.2 115 479-595 50-211 (431)
447 2qe8_A Uncharacterized protein 97.9 0.0015 5.2E-08 67.7 23.4 250 134-414 19-310 (343)
448 3tjm_A Fatty acid synthase; th 97.9 2.4E-05 8.4E-10 79.0 9.2 95 479-594 22-122 (283)
449 1q7f_A NHL, brain tumor CG1071 97.9 0.0043 1.5E-07 62.0 26.0 238 133-427 31-279 (286)
450 3nol_A Glutamine cyclotransfer 97.9 0.0022 7.5E-08 62.5 21.9 193 181-425 46-253 (262)
451 3qqz_A Putative uncharacterize 97.9 0.01 3.5E-07 58.1 26.9 203 133-381 28-252 (255)
452 2ece_A 462AA long hypothetical 97.9 0.0016 5.4E-08 68.6 22.1 235 140-412 90-399 (462)
453 3bg1_A Protein SEC13 homolog; 97.9 0.00046 1.6E-08 70.7 17.9 203 180-428 16-247 (316)
454 3v64_C Agrin; beta propeller, 97.8 0.024 8.2E-07 58.7 30.7 206 134-390 75-283 (349)
455 2w18_A PALB2, fancn, partner a 97.8 0.004 1.4E-07 63.5 23.7 153 247-425 183-354 (356)
456 1ijq_A LDL receptor, low-densi 97.8 0.02 6.8E-07 58.4 29.3 221 159-430 11-240 (316)
457 3p5b_L Low density lipoprotein 97.8 0.021 7E-07 60.4 30.1 223 158-430 92-322 (400)
458 2dsn_A Thermostable lipase; T1 97.8 0.00011 3.8E-09 76.8 11.5 88 480-580 5-123 (387)
459 2z2n_A Virginiamycin B lyase; 97.8 0.029 9.9E-07 55.9 29.6 232 134-429 17-255 (299)
460 1fwx_A Nitrous oxide reductase 97.8 0.0027 9.3E-08 69.3 22.4 247 137-415 90-408 (595)
461 3dr2_A Exported gluconolactona 97.7 0.0032 1.1E-07 64.0 22.0 193 181-428 48-267 (305)
462 3hrp_A Uncharacterized protein 97.7 0.0076 2.6E-07 64.0 24.5 194 137-380 176-408 (409)
463 3qqz_A Putative uncharacterize 97.7 0.0054 1.9E-07 60.0 21.2 200 180-427 29-252 (255)
464 3nok_A Glutaminyl cyclase; bet 97.7 0.0053 1.8E-07 59.9 20.7 190 181-425 58-263 (268)
465 2ghs_A AGR_C_1268P; regucalcin 97.7 0.015 5.1E-07 59.6 25.7 186 107-334 111-314 (326)
466 3sov_A LRP-6, low-density lipo 97.6 0.038 1.3E-06 56.3 28.2 206 134-390 37-246 (318)
467 3p5b_L Low density lipoprotein 97.6 0.09 3.1E-06 55.4 32.1 207 134-390 114-328 (400)
468 2qc5_A Streptogramin B lactona 97.6 0.07 2.4E-06 53.1 30.0 232 134-429 22-260 (300)
469 1rwi_B Serine/threonine-protei 97.6 0.0042 1.4E-07 61.4 19.7 192 134-381 69-263 (270)
470 4ebb_A Dipeptidyl peptidase 2; 97.6 0.00036 1.2E-08 75.4 12.4 116 479-596 41-163 (472)
471 2ece_A 462AA long hypothetical 97.6 0.068 2.3E-06 56.3 29.0 243 158-438 43-361 (462)
472 1ijq_A LDL receptor, low-densi 97.6 0.091 3.1E-06 53.4 31.6 206 134-389 32-245 (316)
473 3nol_A Glutamine cyclotransfer 97.5 0.012 4E-07 57.4 21.0 192 134-380 45-254 (262)
474 3mbr_X Glutamine cyclotransfer 97.5 0.024 8.1E-07 54.7 22.6 194 181-426 24-233 (243)
475 3mbr_X Glutamine cyclotransfer 97.5 0.026 8.8E-07 54.5 22.4 194 135-380 24-233 (243)
476 3m0c_C LDL receptor, low-densi 97.5 0.046 1.6E-06 62.9 28.4 222 159-430 405-634 (791)
477 2fp8_A Strictosidine synthase; 97.5 0.032 1.1E-06 56.8 24.9 240 136-428 23-313 (322)
478 2dg1_A DRP35, lactonase; beta 97.4 0.01 3.4E-07 60.8 21.0 160 244-428 46-213 (333)
479 2z2n_A Virginiamycin B lyase; 97.4 0.11 3.9E-06 51.5 28.4 231 134-429 59-296 (299)
480 1whs_A Serine carboxypeptidase 97.4 0.00076 2.6E-08 65.6 11.0 144 452-600 22-190 (255)
481 3m0c_C LDL receptor, low-densi 97.4 0.12 4E-06 59.5 30.7 204 134-389 426-639 (791)
482 3tc9_A Hypothetical hydrolase; 97.3 0.06 2E-06 57.4 25.3 158 135-336 140-301 (430)
483 3fvz_A Peptidyl-glycine alpha- 97.3 0.078 2.7E-06 54.1 25.4 201 134-381 93-321 (329)
484 2oit_A Nucleoporin 214KDA; NH2 97.3 0.0064 2.2E-07 65.2 17.6 169 245-429 95-279 (434)
485 4a0p_A LRP6, LRP-6, low-densit 97.3 0.26 8.8E-06 55.2 31.2 202 134-387 39-242 (628)
486 1q7f_A NHL, brain tumor CG1071 97.2 0.072 2.5E-06 52.9 24.0 195 134-381 79-279 (286)
487 1ivy_A Human protective protei 97.2 0.00071 2.4E-08 72.3 9.1 136 456-598 26-183 (452)
488 2qc5_A Streptogramin B lactona 97.2 0.22 7.4E-06 49.4 28.6 230 133-427 63-299 (300)
489 2vpj_A Kelch-like protein 12; 97.1 0.14 4.7E-06 51.4 24.9 256 142-437 14-285 (301)
490 2qe8_A Uncharacterized protein 97.1 0.094 3.2E-06 53.9 24.0 207 131-368 66-309 (343)
491 3no2_A Uncharacterized protein 97.1 0.038 1.3E-06 55.0 20.0 200 135-389 40-259 (276)
492 3nok_A Glutaminyl cyclase; bet 97.0 0.071 2.4E-06 51.9 19.6 188 135-380 58-264 (268)
493 4a0p_A LRP6, LRP-6, low-densit 96.9 0.78 2.7E-05 51.3 32.7 228 144-430 7-239 (628)
494 1n7d_A LDL receptor, low-densi 96.9 0.0037 1.3E-07 71.3 11.6 222 159-430 387-616 (699)
495 4hw6_A Hypothetical protein, I 96.9 0.18 6.2E-06 53.7 24.2 157 135-335 142-303 (433)
496 3tc9_A Hypothetical hydrolase; 96.7 0.71 2.4E-05 49.0 26.7 120 134-278 181-301 (430)
497 3s94_A LRP-6, low-density lipo 96.7 0.36 1.2E-05 53.9 25.3 227 159-436 19-250 (619)
498 3sre_A PON1, serum paraoxonase 96.6 0.3 1E-05 50.2 22.5 175 158-370 83-287 (355)
499 1n7d_A LDL receptor, low-densi 96.6 0.006 2.1E-07 69.6 10.7 206 135-391 409-623 (699)
500 1pjx_A Dfpase, DIISOPROPYLFLUO 96.6 0.12 4E-06 52.0 19.1 163 134-337 119-300 (314)
No 1
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=4.9e-101 Score=892.41 Aligned_cols=680 Identities=41% Similarity=0.744 Sum_probs=587.0
Q ss_pred CCCCCCCCCCCcccccCceeeeecCccccCCCccccCCCCHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhcCCCCC
Q 004766 4 LSGIDESLQYPVARRDESVVDDYHGVKIVDPYRWLEDPDAEEVKDFVQKQVELTDSVLKNCDVRDKLREKITKLFDSPRY 83 (732)
Q Consensus 4 ~~~~~~~~~~P~~~~~~~~~~~~~g~~~~D~y~wLed~~~~~~~~~l~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~ 83 (732)
..+....+.||+|+|+|+ ++++||+++.|||+||||.++|+|++||++||+||+++|++++++++|++||+++++++++
T Consensus 3 ~~~~~~~~~~p~~~~~~~-~~~~~g~~~~d~y~wl~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 81 (693)
T 3iuj_A 3 HMSGKARLHYPVTRQGEQ-VDHYFGQAVADPYRWLEDDRSPETEAWVKAQNAVTQDYLAQIPYRAAIKEKLAASWNYAKE 81 (693)
T ss_dssp -------CCCCCCCCCCC-EEEETTEEEECTTGGGGCTTSHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHSCCCEE
T ss_pred ccccccCCCCCCCCCCCe-EEEeCCccccCCchhhcCCCCHHHHHHHHHHHHHHHHHHccChhHHHHHHHHHHhhccccC
Confidence 344455678999999996 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEE
Q 004766 84 DAPFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLM 163 (732)
Q Consensus 84 ~~p~~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 163 (732)
++|.++|+++||++++++++|+.+||+. .++++++|||+|++++++.+.+++++|||||++|||+.+.+|+++++|+|+
T Consensus 82 ~~p~~~g~~~y~~~~~~~~~~~~~~r~~-~~~~~~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~ 160 (693)
T 3iuj_A 82 GAPFREGRYHYFFKNDGLQNQNVLWRQQ-EGKPAEVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLM 160 (693)
T ss_dssp CCCEEETTEEEEEEECSSCSSCEEEEEC-TTSCCEEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEE
T ss_pred CCCEEECCEEEEEEEcCCCceeEEEEeC-CCCCcEEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEE
Confidence 9999999999999999999998899875 456779999999999888889999999999999999999999999999999
Q ss_pred ECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCC-CC
Q 004766 164 RIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPE-HP 242 (732)
Q Consensus 164 dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~-~~ 242 (732)
|++||+.+++.+.++++++++|| ||+.|+|++.+... .+..++..++.+||+|++++++.++++|+++++ ++
T Consensus 161 dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~------~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~ 233 (693)
T 3iuj_A 161 DVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPD------GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQH 233 (693)
T ss_dssp ETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------------CCCCEEEEEETTSCGGGCEEEESCSGGGC
T ss_pred ECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcc------cccccccCCCcEEEEEECCCCcccceEEEecCCCCC
Confidence 99999987776666655889999 99999999976521 123344578899999999999888999998876 56
Q ss_pred eeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCC
Q 004766 243 KYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNK 322 (732)
Q Consensus 243 ~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~ 322 (732)
.+..++.|||||++|++....... .+++|++|++++. .+++.++...+.....|+++|++|||++++
T Consensus 234 ~~~~~~~~SpDg~~l~~~~~~~~~-~~~i~~~d~~~~~------------~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~ 300 (693)
T 3iuj_A 234 HRYVGATVTEDDRFLLISAANSTS-GNRLYVKDLSQEN------------APLLTVQGDLDADVSLVDNKGSTLYLLTNR 300 (693)
T ss_dssp CSEEEEEECTTSCEEEEEEESSSS-CCEEEEEETTSTT------------CCCEEEECSSSSCEEEEEEETTEEEEEECT
T ss_pred eEEEEEEEcCCCCEEEEEEccCCC-CcEEEEEECCCCC------------CceEEEeCCCCceEEEEeccCCEEEEEECC
Confidence 667789999999999998875542 4689999998742 125667666665666689999999999999
Q ss_pred CCCCceEEEEeCCCCC--CceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEe
Q 004766 323 DAPKYKIIRVDLKEPN--DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAI 399 (732)
Q Consensus 323 ~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~ 399 (732)
++++++|+++|++++. .|+.++++.+ ..+ +++..+ ++|++...+++..+|++++++ |...+.|.++ .+.+..+
T Consensus 301 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~-~~s~~g-~~lv~~~~~~g~~~l~~~d~~-g~~~~~l~~p~~~~~~~~ 376 (693)
T 3iuj_A 301 DAPNRRLVTVDAANPGPAHWRDLIPERQ-QVL-TVHSGS-GYLFAEYMVDATARVEQFDYE-GKRVREVALPGLGSVSGF 376 (693)
T ss_dssp TCTTCEEEEEETTSCCGGGCEEEECCCS-SCE-EEEEET-TEEEEEEEETTEEEEEEECTT-SCEEEEECCSSSSEEEEC
T ss_pred CCCCCEEEEEeCCCCCccccEEEecCCC-CEE-EEEEEC-CEEEEEEEECCeeEEEEEECC-CCeeEEeecCCCceEEee
Confidence 8889999999998875 3788998874 445 677665 899999999999999999998 5555788776 5677778
Q ss_pred ecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEeecCCCCCCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCC
Q 004766 400 SARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDG 479 (732)
Q Consensus 400 ~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~ 479 (732)
+.+++++.++++++++++|+++|.+|+.+++ .++++.+.. .+++..+.++++++++.|| ++||+++++|++...++
T Consensus 377 ~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~--~~~l~~~~~-~~~~~~~~~~~~~~~~~dg-~~i~~~l~~p~~~~~~~ 452 (693)
T 3iuj_A 377 NGKHDDPALYFGFENYAQPPTLYRFEPKSGA--ISLYRASAA-PFKPEDYVSEQRFYQSKDG-TRVPLIISYRKGLKLDG 452 (693)
T ss_dssp CCCTTCSCEEEEEECSSSCCEEEEECTTTCC--EEEEECCCS-SCCGGGEEEEEEEEECTTS-CEEEEEEEEESSCCCSS
T ss_pred ecCCCCCEEEEEecCCCCCCEEEEEECCCCe--EEEEEeCCC-CcChhhCeeEEEEEecCCC-cEEEEEEEecCCCCCCC
Confidence 8889999999999999999999999998885 777776544 4777888999999999999 99999999999876678
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCC
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 559 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 559 (732)
+.|+||++|||++.+..+.|+.....|++ +||+|+++|+||+|++|+.|+.++....+.+.++|+++++++|++++++|
T Consensus 453 ~~P~ll~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 531 (693)
T 3iuj_A 453 SNPTILYGYGGFDVSLTPSFSVSVANWLD-LGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTR 531 (693)
T ss_dssp CCCEEEECCCCTTCCCCCCCCHHHHHHHH-TTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCC
T ss_pred CccEEEEECCCCCcCCCCccCHHHHHHHH-CCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCC
Confidence 99999999999999989999987767667 99999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHH-HHHHHhcCcccCCCCC
Q 004766 560 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEE-FYWLIKYSPLHNVRRP 638 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~-~~~~~~~sp~~~~~~~ 638 (732)
++||+|+|+|+||++++++++++|++|+|+|+.+|++|+.+++.++.+..|..+||+|.+++. +++|.++||++++++.
T Consensus 532 ~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~sp~~~~~~~ 611 (693)
T 3iuj_A 532 TDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFTAGTGWAYDYGTSADSEAMFDYLKGYSPLHNVRPG 611 (693)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSGGGGGCHHHHCCTTSCHHHHHHHHHHCHHHHCCTT
T ss_pred cceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCCCchhHHHHcCCccCHHHHHHHHHhcCHHHhhccc
Confidence 999999999999999999999999999999999999999998877777778889999988777 8899999999999872
Q ss_pred CCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHH
Q 004766 639 WEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADR 718 (732)
Q Consensus 639 ~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 718 (732)
..+||+||+||.+|.+||++++.+++++|+++ ..+++++++++++++||++..+..+.++.++.+
T Consensus 612 --------~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 676 (693)
T 3iuj_A 612 --------VSYPSTMVTTADHDDRVVPAHSFKFAATLQAD-------NAGPHPQLIRIETNAGHGAGTPVAKLIEQSADI 676 (693)
T ss_dssp --------CCCCEEEEEEESSCSSSCTHHHHHHHHHHHHH-------CCSSSCEEEEEEC-------CHHHHHHHHHHHH
T ss_pred --------CCCCceeEEecCCCCCCChhHHHHHHHHHHhh-------CCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHH
Confidence 15677999999999999999999999999987 333689999999999999988756668999999
Q ss_pred HHHHHHHhCCC
Q 004766 719 YGFMAKMLGAS 729 (732)
Q Consensus 719 ~~fl~~~l~~~ 729 (732)
++||.++||..
T Consensus 677 ~~fl~~~l~~~ 687 (693)
T 3iuj_A 677 YAFTLYEMGYR 687 (693)
T ss_dssp HHHHHHHTTCS
T ss_pred HHHHHHHcCCC
Confidence 99999999875
No 2
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=4.9e-97 Score=863.56 Aligned_cols=693 Identities=56% Similarity=1.044 Sum_probs=604.6
Q ss_pred CCCCcccccC-ceeeeecCccccCCCccccCCCCHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhcCCCCCCCcEEe
Q 004766 11 LQYPVARRDE-SVVDDYHGVKIVDPYRWLEDPDAEEVKDFVQKQVELTDSVLKNCDVRDKLREKITKLFDSPRYDAPFKR 89 (732)
Q Consensus 11 ~~~P~~~~~~-~~~~~~~g~~~~D~y~wLed~~~~~~~~~l~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~~ 89 (732)
+.||+|+|+| + ++++||+++.|||+||||.++|++++||++||++++++|++++++++|+++++++++.++++.|.++
T Consensus 4 ~~~p~~~~~~~~-~~~~~g~~~~d~y~wl~~~~~~~~~~~~~~en~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~d 82 (710)
T 2xdw_A 4 FQYPDVYRDETA-IQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPKYSCHFKK 82 (710)
T ss_dssp SCCCCCCCCTTC-EEEETTEEEECTTGGGGCTTSHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHHHHHHCSCEECCCEEE
T ss_pred CCCCCCCCCCCe-eeeeCCcEEccCChhhcCCCCHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHhhccccCCCCEEE
Confidence 5799999999 7 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc
Q 004766 90 GNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI 169 (732)
Q Consensus 90 g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~ 169 (732)
|+++||.++++++.+..||+++..++++++|+|+|++++++.+.+..++|||||++|||+.+.+|+++++|+++|+++|+
T Consensus 83 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~ 162 (710)
T 2xdw_A 83 GKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK 162 (710)
T ss_dssp TTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE
T ss_pred CCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC
Confidence 99999999988888888999987677889999999999888788999999999999999999999999999999999999
Q ss_pred eecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeE
Q 004766 170 VEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGH 249 (732)
Q Consensus 170 ~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~ 249 (732)
.+..+..+..+.+++|||||+.|+|++.+..... .++..++..++.+||+|++++++.+++++++.++++.+..++.
T Consensus 163 ~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 163 ELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGK---SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp EEEEEEEEECSCCEEECTTSSEEEEEECCCCSSC---CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCcccccCcccceEEEEeCCCEEEEEEECCcccc---ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 7766555555578999999999999987653210 0133344567889999999998877888988776566777899
Q ss_pred EecCCcEEEEEEecCCcceEEEEEEeCCC------CCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCC
Q 004766 250 VTEDGQYLVMCIEENCDPVNKVYYCDLSA------LPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKD 323 (732)
Q Consensus 250 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~ 323 (732)
|||||++|++.+.+.....++||++|+++ +. ..++.+..........|+++|+.|+|.++.+
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~------------~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~ 307 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI------------LKWVKLIDNFEGEYDYVTNEGTVFTFKTNRH 307 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS------------CCCEEEECSSSSCEEEEEEETTEEEEEECTT
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCc------------cceEEeeCCCCcEEEEEeccCCEEEEEECCC
Confidence 99999999998875543357899999876 21 1255666655555557999999999999988
Q ss_pred CCCceEEEEeCCCCC--CceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeec
Q 004766 324 APKYKIIRVDLKEPN--DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISA 401 (732)
Q Consensus 324 ~~~~~l~~~d~~~~~--~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~ 401 (732)
+++++|+++|++++. .|+.|+++.+...+.++.+++++++++.+..++..+|+++++.+|+.++.|+++.+.+..+++
T Consensus 308 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~ 387 (710)
T 2xdw_A 308 SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSG 387 (710)
T ss_dssp CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEec
Confidence 888999999998875 478999887556788899986589999999999999999999668766788888778888888
Q ss_pred ccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEeecCCCCCCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCc
Q 004766 402 RREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSH 481 (732)
Q Consensus 402 s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~ 481 (732)
+++++.++++++|+++|+++|.+|+.+++.+.++++++.++.|++..+.++++++++.|| ++|++++++|++...+++.
T Consensus 388 s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dg-~~i~~~~~~p~~~~~~~~~ 466 (710)
T 2xdw_A 388 QKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDG-TKIPMFIVHKKGIKLDGSH 466 (710)
T ss_dssp CTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCCTTCCGGGEEEEEEEEECTTS-CEEEEEEEEETTCCCSSCS
T ss_pred CCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecccCCcCccccEEEEEEEEcCCC-CEEEEEEEecCCCCCCCCc
Confidence 999999999999999999999999988841157777766666888889999999999999 9999999999987667899
Q ss_pred cEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCC
Q 004766 482 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSR 561 (732)
Q Consensus 482 P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 561 (732)
|+||++|||++.+..+.|+..+..+++++||+|+++|+||+|++|..|+..+...++.+.++|+++++++|++++++|++
T Consensus 467 P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ 546 (710)
T 2xdw_A 467 PAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPK 546 (710)
T ss_dssp CEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGG
T ss_pred cEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcc
Confidence 99999999999988888988766655548999999999999999999999999899999999999999999999999999
Q ss_pred cEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCC-----
Q 004766 562 KLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVR----- 636 (732)
Q Consensus 562 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~----- 636 (732)
||+|+|+|+||++++++++++|++|+|+|+.+|++|+..++..+.+..|..+||+|.+++.++.+.++||++++.
T Consensus 547 ~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~ 626 (710)
T 2xdw_A 547 RLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEAD 626 (710)
T ss_dssp GEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSST
T ss_pred eEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCCChhHHHhCCCCCCHHHHHHHHHhCcHhhhcccccc
Confidence 999999999999999999999999999999999999999887776667888999998888899999999999998
Q ss_pred CCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHH
Q 004766 637 RPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAA 716 (732)
Q Consensus 637 ~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 716 (732)
.. .+||+||+||.+|.+||++++.+++++|+++.+. .+++++++++++++++||++..+..+..+..+
T Consensus 627 ~~---------~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 694 (710)
T 2xdw_A 627 DI---------QYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGR---SRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVS 694 (710)
T ss_dssp TC---------CCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTT---STTCCSCEEEEEESSCCSSTTCCHHHHHHHHH
T ss_pred cC---------CCCcEEEEEeCCCCccChhHHHHHHHHHHhhhcc---ccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHH
Confidence 52 4579999999999999999999999999975111 02347899999999999999887655678999
Q ss_pred HHHHHHHHHhCCCcCC
Q 004766 717 DRYGFMAKMLGASWVE 732 (732)
Q Consensus 717 ~~~~fl~~~l~~~~~~ 732 (732)
.+++||.++|+..|.+
T Consensus 695 ~~~~fl~~~l~~~~~~ 710 (710)
T 2xdw_A 695 DMFAFIARCLNIDWIP 710 (710)
T ss_dssp HHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHHcCCccCC
Confidence 9999999999988753
No 3
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=5.2e-96 Score=852.43 Aligned_cols=674 Identities=36% Similarity=0.667 Sum_probs=590.1
Q ss_pred CCCcccccCceeeeecCccccCCCccccCCCCHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhcCCCCCCCcEEeCC
Q 004766 12 QYPVARRDESVVDDYHGVKIVDPYRWLEDPDAEEVKDFVQKQVELTDSVLKNCDVRDKLREKITKLFDSPRYDAPFKRGN 91 (732)
Q Consensus 12 ~~P~~~~~~~~~~~~~g~~~~D~y~wLed~~~~~~~~~l~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~~g~ 91 (732)
.||+|+|+|+ ++++||+++.|||+||||.++|+|++||++||+||+++|++++++++|+++|+++++.++++.|.++|+
T Consensus 2 ~~p~~~~~~~-~~~~~g~~~~d~y~wl~~~~~~~~~~~~~~en~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~dG~ 80 (695)
T 2bkl_A 2 SYPATRAEQV-VDTLHGVQVADPYRWLEDEKAPEVQTWMTAQNAHAREALAKFPGREALAARFKELFYTDSVSTPSRRNG 80 (695)
T ss_dssp CCSCCCCCCC-EEEETTEEEECTTGGGGCTTSHHHHHHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHSCCEECCCEEETT
T ss_pred CCCCCCCCCe-eeeeCCcEEecCChHhcCCCCHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHhhccccCCCCEEECC
Confidence 6899999996 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee
Q 004766 92 KYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE 171 (732)
Q Consensus 92 ~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~ 171 (732)
++||.++++++++..||+++..++++++|+|+|++++++.+.+..++|||||++|||+.+.+|++..+|+++|+++|+.+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~ 160 (695)
T 2bkl_A 81 RFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS 160 (695)
T ss_dssp EEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC
T ss_pred EEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc
Confidence 99999998888888999998777788999999999988888999999999999999999999999999999999999977
Q ss_pred -cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEE
Q 004766 172 -ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHV 250 (732)
Q Consensus 172 -~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~ 250 (732)
...+.++.+.+++|||||+.|+|++.+... .+..++..++.+||+|++++++.+++++++.++++.+..++.|
T Consensus 161 ~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~------~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~ 234 (695)
T 2bkl_A 161 KVDVIEGGKYATPKWTPDSKGFYYEWLPTDP------SIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDL 234 (695)
T ss_dssp SSCCBSCCTTCCCEECTTSSEEEEEECCCCT------TSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEE
T ss_pred CCcccCcccccceEEecCCCEEEEEEecCCC------CCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEE
Confidence 545555444789999999999999876521 1233445678899999999998778899987766667779999
Q ss_pred ecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEE
Q 004766 251 TEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKII 330 (732)
Q Consensus 251 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~ 330 (732)
||||++|++.+.+.. ..++||+++..+++ ++.+..........+.++|+ ||+.++.++++++|+
T Consensus 235 SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~--------------~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~ 298 (695)
T 2bkl_A 235 SRDGKYLFVYILRGW-SENDVYWKRPGEKD--------------FRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVF 298 (695)
T ss_dssp CTTSCCEEEEEEETT-TEEEEEEECTTCSS--------------CEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEE
T ss_pred CCCCCEEEEEEeCCC-CceEEEEEcCCCCc--------------eEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEE
Confidence 999999999887652 36889999765432 45666555444444558888 999999887889999
Q ss_pred EEeCCCCC--CceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEeecccCCcE
Q 004766 331 RVDLKEPN--DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSV 407 (732)
Q Consensus 331 ~~d~~~~~--~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~d~~~ 407 (732)
++|++++. .|+.++++.++..+.++.+++ +.+++....++..+|++++++ |+..+.|.++ .+.+..++++++++.
T Consensus 299 ~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~-~~lv~~~~~dg~~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s~d~~~ 376 (695)
T 2bkl_A 299 EVDPAKPARASWKEIVPEDSSASLLSVSIVG-GHLSLEYLKDATSEVRVATLK-GKPVRTVQLPGVGAASNLMGLEDLDD 376 (695)
T ss_dssp EEBTTBCSGGGCEEEECCCSSCEEEEEEEET-TEEEEEEEETTEEEEEEEETT-CCEEEECCCSSSSEECCCBSCTTCSE
T ss_pred EEeCCCCCccCCeEEecCCCCCeEEEEEEEC-CEEEEEEEECCEEEEEEEeCC-CCeeEEecCCCCeEEEEeecCCCCCE
Confidence 99998775 378898876567788899885 899999999999999999986 6655778777 677777888899999
Q ss_pred EEEEEecCCCCceEEEEECCCCCCceEEEEeecCCCCCCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEE
Q 004766 408 VFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYG 487 (732)
Q Consensus 408 l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~ 487 (732)
++++++|+++|+++|.+|+.+++ .+++++.... |++..+.++++++++.|| ++|++++++|+++..+++.|+||++
T Consensus 377 l~~~~ss~~~P~~v~~~d~~~g~--~~~l~~~~~~-~~~~~~~~~~~~~~~~dg-~~i~~~~~~p~~~~~~~~~p~vl~~ 452 (695)
T 2bkl_A 377 AYYVFTSFTTPRQIYKTSVSTGK--SELWAKVDVP-MNPEQYQVEQVFYASKDG-TKVPMFVVHRKDLKRDGNAPTLLYG 452 (695)
T ss_dssp EEEEEEETTEEEEEEEEETTTCC--EEEEEECCCS-SCGGGEEEEEEEEECTTS-CEEEEEEEEETTCCCSSCCCEEEEC
T ss_pred EEEEEcCCCCCCEEEEEECCCCc--EEEEecCCCC-CCHHHCeEEEEEEECCCC-CEEEEEEEECCCCCCCCCccEEEEE
Confidence 99999999999999999999885 6777765543 777788999999999999 9999999999987667899999999
Q ss_pred cCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEe
Q 004766 488 YGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEG 567 (732)
Q Consensus 488 hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G 567 (732)
|||++.+..+.|+.....|++ +||+|+++|+||+|++|..|+..+....+.+.++|+++++++|++++++|++||+|+|
T Consensus 453 hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G 531 (695)
T 2bkl_A 453 YGGFNVNMEANFRSSILPWLD-AGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYG 531 (695)
T ss_dssp CCCTTCCCCCCCCGGGHHHHH-TTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEE
T ss_pred CCCCccccCCCcCHHHHHHHh-CCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEE
Confidence 999999888889887766666 9999999999999999999999999889999999999999999999999999999999
Q ss_pred cChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCC
Q 004766 568 GSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPF 647 (732)
Q Consensus 568 ~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~ 647 (732)
+|+||++++++++++|++|+|+|+.+|++|+..+..+..+..|..+||+|.+++.++.+.++||+++++.. +
T Consensus 532 ~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~--------~ 603 (695)
T 2bkl_A 532 GSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYGTAEKPEDFKTLHAYSPYHHVRPD--------V 603 (695)
T ss_dssp ETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCSS--------C
T ss_pred ECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCCcchHHHhCCCCCHHHHHHHHhcChHhhhhhc--------C
Confidence 99999999999999999999999999999999887766666778899999889999999999999999874 3
Q ss_pred CCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 648 QYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 648 ~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
.+||+||+||.+|.+||++++.+++++|+++ ...++++++++++++||++..+..+..+..+.+++||.++|+
T Consensus 604 ~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 676 (695)
T 2bkl_A 604 RYPALLMMAADHDDRVDPMHARKFVAAVQNS-------PGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQVLD 676 (695)
T ss_dssp CCCEEEEEEETTCSSSCTHHHHHHHHHHHTS-------TTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHHHhh-------ccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 5699999999999999999999999999973 112789999999999999977665567888999999999998
Q ss_pred CCc
Q 004766 728 ASW 730 (732)
Q Consensus 728 ~~~ 730 (732)
..+
T Consensus 677 ~~~ 679 (695)
T 2bkl_A 677 VQG 679 (695)
T ss_dssp C--
T ss_pred CCC
Confidence 764
No 4
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=1.2e-93 Score=838.18 Aligned_cols=678 Identities=42% Similarity=0.694 Sum_probs=575.5
Q ss_pred CCCCCcccccCceeeeecCccccCCCccccCC--CCHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhcCCCCCCCcE
Q 004766 10 SLQYPVARRDESVVDDYHGVKIVDPYRWLEDP--DAEEVKDFVQKQVELTDSVLKNCDVRDKLREKITKLFDSPRYDAPF 87 (732)
Q Consensus 10 ~~~~P~~~~~~~~~~~~~g~~~~D~y~wLed~--~~~~~~~~l~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~ 87 (732)
...||+|+|+|+ ++++||+++.|||+||||. ++|++++||++||+|++++|++++++++|++++++++..++++.|.
T Consensus 37 ~~~~p~~~~~~~-~~~~~g~~~~d~y~wl~~~~~~~~~~~~~~~aen~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~ 115 (741)
T 1yr2_A 37 LPPYPASPQVPL-VEDHFGEKVSDPWRWLEADVRTDAKVAAWVQAQSAYTAAYLKQLPERAALEKRMKALIDYERFGLPQ 115 (741)
T ss_dssp -CCCCCCCCCCC-EEEETTEEEECTTGGGGSCTTTCHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHSCCCEECCCE
T ss_pred cCCCCCCCCCCe-eeeeCCcEEccCcHHHhCCCCCCHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHhhcccccCCCE
Confidence 356899999996 8999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred EeCCEEEEEEEcCCCCeeEEEEEeCC---CCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEE
Q 004766 88 KRGNKYFYFHNTGLQPQSVLYVQDSL---DAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMR 164 (732)
Q Consensus 88 ~~g~~~~~~~~~~~~~~~~l~~r~~~---~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 164 (732)
++|+++||.++++++++..||+++.. ++++++|+|+|++++++.+.+.+++|||||++|||+.+.+|+++.+|+++|
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 99999999999888888999999876 677899999999998877889999999999999999999999999999999
Q ss_pred CCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCee
Q 004766 165 IEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKY 244 (732)
Q Consensus 165 l~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~ 244 (732)
+++|+.++....+..+.+++|||| +.|+|++.+.... .+..++..++.+||+|++++++.+++++++.++++.+
T Consensus 196 l~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~-----~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~ 269 (741)
T 1yr2_A 196 VADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKE-----GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKR 269 (741)
T ss_dssp TTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC-------------CCCCCEEEEEETTSCGGGCEEEECCTTCTTC
T ss_pred CCCCCCCCccCCCceeccEEEECC-CEEEEEEecCccc-----ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeE
Confidence 999998776555554578999999 9999998665210 1122334567899999999998878899988766556
Q ss_pred EEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCC
Q 004766 245 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDA 324 (732)
Q Consensus 245 ~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~ 324 (732)
..++.|||||++|++.+.+..+..++||++|++++. ..+++.+....+.....++|+|+.|+|.++.++
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~-----------~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~ 338 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGK-----------IGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGA 338 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTE-----------ECCCEEEECSSSSCEEEEEEETTEEEEEECTTC
T ss_pred EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCC-----------CcccEEecCCCCceEEEEeccCCEEEEEECCCC
Confidence 779999999999999987664346789999987631 011455655554445557799999999999888
Q ss_pred CCceEEEEeCCCC-CCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEeecc
Q 004766 325 PKYKIIRVDLKEP-NDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISAR 402 (732)
Q Consensus 325 ~~~~l~~~d~~~~-~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s 402 (732)
++++|+++|++++ ..|+.++++.. ..+.++.+++ +.+++....++..+|++++++ |+..+.|+++ .+.+..++++
T Consensus 339 ~~~~l~~~d~~~~~~~~~~l~~~~~-~~l~~~~~~~-~~lv~~~~~dg~~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s 415 (741)
T 1yr2_A 339 PLKKIVRVDLSGSTPRFDTVVPESK-DNLESVGIAG-NRLFASYIHDAKSQVLAFDLD-GKPAGAVSLPGIGSASGLSGR 415 (741)
T ss_dssp TTCEEEEEECSSSSCEEEEEECCCS-SEEEEEEEEB-TEEEEEEEETTEEEEEEEETT-SCEEEECBCSSSCEEEEEECC
T ss_pred CCCEEEEEeCCCCccccEEEecCCC-CeEEEEEEEC-CEEEEEEEECCEEEEEEEeCC-CCceeeccCCCCeEEEEeecC
Confidence 8999999999885 35888888763 5678888886 899999999999999999986 6555778876 6778888889
Q ss_pred cCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEeecCCCCCCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCcc
Q 004766 403 REDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHP 482 (732)
Q Consensus 403 ~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P 482 (732)
++++.++++++|+++|+++|.+|+.+++ .++++++ ...|++..+..+++++++.|| ++|++++++|++. +++.|
T Consensus 416 ~d~~~l~~~~ss~~~P~~i~~~d~~tg~--~~~l~~~-~~~~~~~~~~~~~~~~~~~dg-~~i~~~~~~p~~~--~~~~p 489 (741)
T 1yr2_A 416 PGDRHAYLSFSSFTQPATVLALDPATAK--TTPWEPV-HLTFDPADFRVEQVFYPSKDG-TKVPMFIVRRKDA--KGPLP 489 (741)
T ss_dssp BTCSCEEEEEEETTEEEEEEEEETTTTE--EEECSCC-CCSSCGGGEEEEEEEEECTTS-CEEEEEEEEETTC--CSCCC
T ss_pred CCCCEEEEEEcCCCCCCEEEEEECCCCc--EEEEecC-CCCCChhHCEEEEEEEEcCCC-CEEEEEEEecCCC--CCCCc
Confidence 9999999999999999999999999884 6677663 335788888999999999999 9999999999875 57899
Q ss_pred EEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCc
Q 004766 483 CLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRK 562 (732)
Q Consensus 483 ~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~ 562 (732)
+||++|||++.+..+.|+.....|++ +||+|+++|+||+|++|+.|+..+...++.+.++|+++++++|++++++|++|
T Consensus 490 ~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~r 568 (741)
T 1yr2_A 490 TLLYGYGGFNVALTPWFSAGFMTWID-SGGAFALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHG 568 (741)
T ss_dssp EEEECCCCTTCCCCCCCCHHHHHHHT-TTCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTC
T ss_pred EEEEECCCCCccCCCCcCHHHHHHHH-CCcEEEEEecCCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHH
Confidence 99999999999888889887766555 99999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCC
Q 004766 563 LCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQN 642 (732)
Q Consensus 563 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~ 642 (732)
|+|+|+|+||++++++++++|++|+|+|+.+|++|+..+..+..+..|..+||+|.+++.++.+.++||+++++..
T Consensus 569 i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~---- 644 (741)
T 1yr2_A 569 LAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYWVDDYGYPEKEADWRVLRRYSPYHNVRSG---- 644 (741)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGGHHHHCCTTSHHHHHHHHTTCGGGCCCTT----
T ss_pred EEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchhHHHcCCCCCHHHHHHHHHcCchhhhhcc----
Confidence 9999999999999999999999999999999999999887766666677899999888899999999999999862
Q ss_pred CCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHH
Q 004766 643 PDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 722 (732)
Q Consensus 643 ~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 722 (732)
..+||+||+||.+|.+||++++.+++++|++. ++.|+++++++++++||++..+..+..+..+.+++||
T Consensus 645 ----~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~-------~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl 713 (741)
T 1yr2_A 645 ----VDYPAILVTTADTDDRVVPGHSFKYTAALQTA-------AIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFL 713 (741)
T ss_dssp ----SCCCEEEEEECSCCSSSCTHHHHHHHHHHHHS-------CCCSSCEEEEEC---------CHHHHHHHHHHHHHHH
T ss_pred ----CCCCCEEEEeeCCCCCCChhHHHHHHHHHhhh-------hcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence 13489999999999999999999999999983 2238999999999999998876665678899999999
Q ss_pred HHHhCCCc
Q 004766 723 AKMLGASW 730 (732)
Q Consensus 723 ~~~l~~~~ 730 (732)
.++|+..+
T Consensus 714 ~~~l~~~~ 721 (741)
T 1yr2_A 714 AHFTGLTP 721 (741)
T ss_dssp HHHHTCCC
T ss_pred HHHcCCCc
Confidence 99998764
No 5
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=2.5e-93 Score=831.95 Aligned_cols=675 Identities=25% Similarity=0.397 Sum_probs=565.1
Q ss_pred CCCCCCCCCCCCCCcccccCceeeeecC---------------ccccCCCccccCCC--CHHHHHHHHHHHHHHHHHHcC
Q 004766 1 MASLSGIDESLQYPVARRDESVVDDYHG---------------VKIVDPYRWLEDPD--AEEVKDFVQKQVELTDSVLKN 63 (732)
Q Consensus 1 ~~~~~~~~~~~~~P~~~~~~~~~~~~~g---------------~~~~D~y~wLed~~--~~~~~~~l~~qn~~t~~~l~~ 63 (732)
|+|..-....+.||+|+|+|+ +++ || +++.|||+||||.+ ||||++||++||+||+++|++
T Consensus 21 ~~~~~~~~~~~~~p~~~~~~~-~~~-~g~~~~~~~~~~~~~~~~~~~d~y~wl~d~~~~~~~~~~~~~~~n~~~~~~~~~ 98 (751)
T 2xe4_A 21 MSSDSSVAASAQPPIAAKKPH-RVT-LGYVEGEDRGPNPMNPPRYREDPYFWMRDDDRKDPAVIEHLNKEKVYFQARSAD 98 (751)
T ss_dssp ---------CCCCCCCCCCCC-EEE-ESCCTTSCCCSSCCSSCEEEECTTGGGCCTTSCCHHHHHHHHHHHHHHHHHHGG
T ss_pred ccccccCCCCCCCCCCCCCCe-eec-CCCcccccccccccCCCeEEeeCCccccCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 444443333367999999996 789 99 99999999999998 999999999999999999999
Q ss_pred C-hhHHHHHHHHHhhcCCCCCCCcEEeCCEEEEEEEcCCCCeeEEEEEeC---CCC--CceEEeCCCCcCCCCC-EEEEe
Q 004766 64 C-DVRDKLREKITKLFDSPRYDAPFKRGNKYFYFHNTGLQPQSVLYVQDS---LDA--KAKVLLDPNTLSDDGT-AALIK 136 (732)
Q Consensus 64 ~-~~~~~l~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~l~~r~~---~~~--~~~~l~D~~~l~~~~~-~~~~~ 136 (732)
+ +++++|++||+++++++++++|.++|+++||.++.+++++.++|+++. .++ ++++|+|+|++++++. +.++.
T Consensus 99 ~~~~~~~l~~e~~~~~~~~~~~~p~~~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~ 178 (751)
T 2xe4_A 99 IAQLRDDIYAEHISHINEDDMSAPYVYGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVME 178 (751)
T ss_dssp GHHHHHHHHHHHHHTSCSSEECCCEEETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEE
T ss_pred hhHHHHHHHHHHHHhcccccCCCCeEECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEee
Confidence 9 999999999999999999999999999999999988888888888875 444 6799999999988754 58999
Q ss_pred EEEC-CCCcEEEEEEeccCCceEEEEEEECCCC-ceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 137 VSVS-EDAKYLAYALSYSGSDWATIKLMRIEDQ-IVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 137 ~~~S-PDG~~la~~~~~~G~e~~~i~v~dl~~g-~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
++|| |||++|||+.+.+|+++++||++|+++| +.+++.+.+. .++++|||||++|+|++.+. .
T Consensus 179 ~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~-~~~~~WspDg~~l~y~~~d~--------------~ 243 (751)
T 2xe4_A 179 VKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGT-NGEIVWGPDHTSLFYVTKDE--------------T 243 (751)
T ss_dssp EEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEE-CSCCEECSSTTEEEEEEECT--------------T
T ss_pred eEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCc-eeeEEEecCCCEEEEEEECC--------------C
Confidence 9999 9999999999999999999999999999 8665555444 47899999999999998654 2
Q ss_pred CcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCC
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLP 294 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 294 (732)
.++.+||++++++++.++++++++++. .+..++.|||||++|++.+.... .++||++|++++. ..
T Consensus 244 ~~~~~v~~~~lgt~~~~~~lv~~~~~~-~~~~~~~~SpDg~~l~~~~~~~~--~~~l~~~d~~~~~------------~~ 308 (751)
T 2xe4_A 244 LRENKVWRHVMGKLQSEDVCLYEEHNP-LFSAFMYKAADTNTLCIGSQSPE--TAEVHLLDLRKGN------------AH 308 (751)
T ss_dssp CCEEEEEEEETTSCGGGCEEEEECCCT-TCEEEEEECTTSSEEEEEEECSS--CEEEEEEESSSCT------------TC
T ss_pred CCCCEEEEEECCCCchhcEEEEecCCC-ceEEEEEECCCCCEEEEEecCCC--CceEEEEECCCCC------------CC
Confidence 456789999999988778889987654 46678999999999999987654 6899999998742 11
Q ss_pred c--EEeeecccceEEEEEe---cCCeEEEEeCCC-CCCceEEEEeCCCCCCceE-eccCCCCCceeEEEEecCCEEEEEE
Q 004766 295 F--VKLIDGFDAQYEVIAN---DDTVFTFLTNKD-APKYKIIRVDLKEPNDWFE-VIPEAERDVLESATAVNLNQMIVSY 367 (732)
Q Consensus 295 ~--~~l~~~~~~~~~~~s~---dg~~l~~~s~~~-~~~~~l~~~d~~~~~~~~~-l~~~~~~~~l~~~~~~~~~~l~~~~ 367 (732)
. +.++...... .|++ +|+.|||+++++ +.+++|+++|++++..|+. ++++..+..+.++.+.+ +.|++..
T Consensus 309 ~~~~~l~~~~~~~--~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~ 385 (751)
T 2xe4_A 309 NTLEIVRPREKGV--RYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRS-NYLVVAG 385 (751)
T ss_dssp CCEEESSCCCTTC--CEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECS-SEEEEEE
T ss_pred ceeEEeecCCCCc--eEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEEC-CEEEEEE
Confidence 3 3444322211 1334 499999999987 7789999999986434777 88877666778888876 8999999
Q ss_pred ecCCeeEEEEEeC-------CCCceeeeccccc-ceeeEeec----ccCCcEEEEEEecCCCCceEEEEECCCCCCceEE
Q 004766 368 LSDVKYVLQIRDL-------KNGSLLHQLPIEI-GSVNAISA----RREDSVVFISFTSFLIPGIVYQCNLKTETPEMKI 435 (732)
Q Consensus 368 ~~~g~~~l~~~d~-------~~g~~~~~l~~~~-g~v~~~~~----s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~ 435 (732)
..++..+|+++++ ++|+..+.|+++. +.+..++. +++++.++++++|+++|+++|.+|+.+++ .++
T Consensus 386 ~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~--~~~ 463 (751)
T 2xe4_A 386 RRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS--RTA 463 (751)
T ss_dssp EETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC--EEE
T ss_pred EeCCEEEEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc--EEE
Confidence 9999999999996 5455136777763 33335543 46888999999999999999999999885 777
Q ss_pred EEeecCC-CCCCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEE
Q 004766 436 FRETIIP-GFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVF 514 (732)
Q Consensus 436 l~~~~~~-~~~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v 514 (732)
+++...+ .+++..+.++++++++.|| ++|++++++|++.+.+++.|+||++|||++....+.|+.....|++ +||+|
T Consensus 464 l~~~~~~~~~~~~~~~~~~~~~~s~dG-~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~-~G~~v 541 (751)
T 2xe4_A 464 VKVREVGGGFDAANYKVERRFATAPDQ-TKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCD-RGMIF 541 (751)
T ss_dssp EEECCCCTTCCGGGEEEEEEEEECTTC-CEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHT-TTCEE
T ss_pred EeccccccCCCccceEEEEEEEECCCC-cEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHh-CCcEE
Confidence 8766554 5777788899999999999 9999999999987667889999999999998888889877665555 99999
Q ss_pred EEEcccCCCCCchhHHh-cccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcC
Q 004766 515 CIANIRGGGEYGEEWHK-GGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHV 593 (732)
Q Consensus 515 ~~~~~rG~g~~g~~~~~-~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~ 593 (732)
+++|+||+|++|+.|+. .+...++.+.++|+++++++|++++++|++||+|+|+|+||++++++++++|++|+|+|+.+
T Consensus 542 ~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~ 621 (751)
T 2xe4_A 542 AIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGV 621 (751)
T ss_dssp EEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEES
T ss_pred EEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeC
Confidence 99999999999999999 99888899999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccccCCCC----CccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHH
Q 004766 594 GVMDMLRYHKFTIG----HAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSL 669 (732)
Q Consensus 594 p~~d~~~~~~~~~~----~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~ 669 (732)
|++|+..++..... ..| .+||+|.+++.++.+.++||++++++. .+||+||+||.+|.+||++++.
T Consensus 622 ~~~d~~~~~~~~~~~~~~~~~-~~~g~p~~~~~~~~~~~~sp~~~~~~~---------~~Pp~Lii~G~~D~~vp~~~~~ 691 (751)
T 2xe4_A 622 PFVDVMTTMCDPSIPLTTGEW-EEWGNPNEYKYYDYMLSYSPMDNVRAQ---------EYPNIMVQCGLHDPRVAYWEPA 691 (751)
T ss_dssp CCCCHHHHHTCTTSTTHHHHT-TTTCCTTSHHHHHHHHHHCTGGGCCSS---------CCCEEEEEEETTCSSSCTHHHH
T ss_pred CcchHHhhhcccCcccchhhH-HHcCCCCCHHHHHHHHhcChhhhhccC---------CCCceeEEeeCCCCCCCHHHHH
Confidence 99999876421111 123 678999888888899999999999872 4567999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCcC
Q 004766 670 KLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGASWV 731 (732)
Q Consensus 670 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 731 (732)
+++++|+++ ...+.++.+++++++||++..+..+.++..+.+++||.++|+..++
T Consensus 692 ~~~~~L~~~-------~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~~~~ 746 (751)
T 2xe4_A 692 KWVSKLREC-------KTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKSTVR 746 (751)
T ss_dssp HHHHHHHHH-------CCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred HHHHHHHhc-------CCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCCCch
Confidence 999999987 2234678899999999999876655678889999999999998764
No 6
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=3.1e-91 Score=794.04 Aligned_cols=657 Identities=24% Similarity=0.376 Sum_probs=558.7
Q ss_pred eeecCccccCCCccccCCCCHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhcCCC-CCCCcEEeCCEEEEEEEcCCC
Q 004766 24 DDYHGVKIVDPYRWLEDPDAEEVKDFVQKQVELTDSVLKNCDVRDKLREKITKLFDSP-RYDAPFKRGNKYFYFHNTGLQ 102 (732)
Q Consensus 24 ~~~~g~~~~D~y~wLed~~~~~~~~~l~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~-~~~~p~~~g~~~~~~~~~~~~ 102 (732)
+.-||+++.|||+||||.++|++++||++||++|.++|+++|.+++|+++++++++.+ +++.|.+.|+++||+|+++.+
T Consensus 13 ~~~~~~~~~Dpy~wLEd~~~~~~~~wv~aqN~~T~~~l~~~p~~~~l~~~~~~~~~~~~ri~~p~~~g~~~y~f~~d~~~ 92 (711)
T 4hvt_A 13 DNNKQIFNPKETKFLEEAEGVEALEWAKERTSKTEKALQAMQEYKQIKKEIETIFYDQRKTPYGVIRKGYVYNFWMDDKN 92 (711)
T ss_dssp -------CHHHHGGGGSSSSSHHHHHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHTCTTSCCCCEEETTEEEEEECCSSC
T ss_pred cCCCceeeCCCchhhcCCCCHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHhccccccCCcEEECCEEEEEEecCCC
Confidence 4457999999999999999999999999999999999999999999999999999886 899999999999999999999
Q ss_pred CeeEEEEEeCC------CCCceEEeCCCCcCCC-CC-EEEEeEE-ECCCCcEEEEEEeccCCceEEEEEEECCCCceecc
Q 004766 103 PQSVLYVQDSL------DAKAKVLLDPNTLSDD-GT-AALIKVS-VSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD 173 (732)
Q Consensus 103 ~~~~l~~r~~~------~~~~~~l~D~~~l~~~-~~-~~~~~~~-~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~ 173 (732)
+| .||||+.. ++++++|||+|+|+++ |. +.+.+.+ +||||+++||+++.+|+++..|+++|++||+.+++
T Consensus 93 ~~-gl~rrt~~~~~~~~~p~wevllD~d~l~~~~g~~~~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~ 171 (711)
T 4hvt_A 93 PQ-GLWRRTLVDNYSKDKPNWEVLIDFDKLSKKIGKKVAYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKN 171 (711)
T ss_dssp SS-CEEEEEEHHHHTSSSCCCEEEEEHHHHHHHHTSCEEEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTT
T ss_pred Cc-EEEEEccchhcccCCCCcEEEeccccccccCCCcEEEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCC
Confidence 98 79998543 4667999999999876 65 9999998 99999999999999999999999999999998876
Q ss_pred ccc-c--------eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCee
Q 004766 174 ALS-W--------FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKY 244 (732)
Q Consensus 174 ~~~-~--------~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~ 244 (732)
.+. . ++++.++|. |+++++|.+... .+..++++++++||+|++||++.++++||+++++. +
T Consensus 172 ~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~--------~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~-~ 241 (711)
T 4hvt_A 172 GFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLH--------KNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEY-I 241 (711)
T ss_dssp CSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCS--------TTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTS-C
T ss_pred CcccccccccccccccceeeEE-CCCEEEEEeCCC--------CCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCc-e
Confidence 554 2 244667998 777888875433 34567788999999999999999999999988764 4
Q ss_pred EEEeEEecCCcE----EEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEe
Q 004766 245 IFSGHVTEDGQY----LVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLT 320 (732)
Q Consensus 245 ~~~~~~SpDg~~----l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s 320 (732)
..++..++|+++ +++... .+...+++|+++++... .++..+....+..+ ... .++++|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~------------~~~~~l~~~~~~~~-~~~-~~~~~~~~~ 306 (711)
T 4hvt_A 242 YVSAGKLLSDTISSSLIFISAN-KDFYNYDNYILDTKYKN------------LKLQKINMPSDATL-QGS-FKEYVFWLL 306 (711)
T ss_dssp EEEEEESSCTTTCSSEEEEEEE-SSSSCEEEEEEECSSSS------------CEEEECCSCTTCEE-EEE-ETTEEEEEC
T ss_pred EEEEEEecCCCceEEEEEEEEe-cccCceeEEEEcCCCCC------------CcceEeecCCcceE-eee-ECCEEEEEE
Confidence 567888999985 444433 23346899999976421 11344543333332 233 366888866
Q ss_pred CCC-------CCCceEEEEeCCCC-------CCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCc-e
Q 004766 321 NKD-------APKYKIIRVDLKEP-------NDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGS-L 385 (732)
Q Consensus 321 ~~~-------~~~~~l~~~d~~~~-------~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~-~ 385 (732)
..+ .++++|+.+|++++ ..|++++++..+..++++.+++ +++++...+++.++|+++++.+|+ .
T Consensus 307 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~l~~~~~~~~~~~l~~~~~~~g~~~ 385 (711)
T 4hvt_A 307 RSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTK-DRVFLATYDNVVAKVVTFTLENEQWT 385 (711)
T ss_dssp SSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECS-SCEEEEEEETTEEEEEEECEETTEEC
T ss_pred CcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEEC-CEEEEEEEECCEEEEEEEECCCCceE
Confidence 432 37889999998763 3588877777678899999998 789999999999999999987675 2
Q ss_pred eee-cccc-cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEeecCCCCCCCCceEEEEEEEccCCCe
Q 004766 386 LHQ-LPIE-IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGST 463 (732)
Q Consensus 386 ~~~-l~~~-~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dG~~ 463 (732)
.+. +.+| .+.+..++.+++++.++++++|+++|+++|.+|+. ++ .+.++.. .+.+++..+.++++++++.|| +
T Consensus 386 ~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~--~~~l~~~-~~~~~~~~~~~e~v~~~s~DG-~ 460 (711)
T 4hvt_A 386 KPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HE--LKIIRKA-LYSFDSENYVLEQKEATSFDG-V 460 (711)
T ss_dssp CCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SC--EEEEECC-SSCCCGGGEEEEEEEEECTTS-C
T ss_pred EEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-Cc--EEEEecC-CcccCcccCeeEEEEEECCCC-e
Confidence 355 7777 56777777778889999999999999999999988 63 6777764 345777788899999999999 9
Q ss_pred eEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHH
Q 004766 464 KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFD 543 (732)
Q Consensus 464 ~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~ 543 (732)
+|++++++|++.+.+++.|+||++|||++.+..+.|+..+.+.|.++||+|+++|+||+|++|+.|+..+...++.+.++
T Consensus 461 ~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~ 540 (711)
T 4hvt_A 461 KIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFN 540 (711)
T ss_dssp EEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHH
T ss_pred EEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHH
Confidence 99999999998766789999999999999999999998775345559999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHH
Q 004766 544 DFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEF 623 (732)
Q Consensus 544 D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~ 623 (732)
|++++++||++++++|++||+|+|+|+||++++++++++|++|+|+|+.+|++|+..+..++.+..|..+||+|.+++.+
T Consensus 541 D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~~~~~G~p~~~~~~ 620 (711)
T 4hvt_A 541 DFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSWVTEYGDPEIPNDL 620 (711)
T ss_dssp HHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHH
T ss_pred HHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccchHHHHHhCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988777777788999999988889
Q ss_pred HHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHH-HHhhcCCCCCCCCCCCEEEEEeCCCCC
Q 004766 624 YWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATM-QYVLCTSLENSPQTNPIIGRIERKAGH 702 (732)
Q Consensus 624 ~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~gH 702 (732)
+.+.++||++++++. +.+||+||+||.+|.+||+.++.+++++| +++ |+|+++++++++||
T Consensus 621 ~~l~~~SP~~~v~~i--------~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~----------g~pv~l~~~p~~gH 682 (711)
T 4hvt_A 621 LHIKKYAPLENLSLT--------QKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNP----------NTKTYFLESKDSGH 682 (711)
T ss_dssp HHHHHHCGGGSCCTT--------SCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCT----------TCCEEEEEESSCCS
T ss_pred HHHHHcCHHHHHhhc--------CCCCCEEEEecCCCCcCChHHHHHHHHHHHHHc----------CCCEEEEEECCCCC
Confidence 999999999999984 35689999999999999999999999999 987 89999999999999
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHhCCCc
Q 004766 703 GVGLPTQKMIDEAADRYGFMAKMLGASW 730 (732)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 730 (732)
++..+..+.+...+.+++||.++||..+
T Consensus 683 g~~~~~~~~~~~~~~i~~FL~~~Lg~~i 710 (711)
T 4hvt_A 683 GSGSDLKESANYFINLYTFFANALKLKI 710 (711)
T ss_dssp SSCSSHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cCcCCcchHHHHHHHHHHHHHHHhCCcc
Confidence 9987777678888999999999999875
No 7
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=7.3e-54 Score=496.25 Aligned_cols=589 Identities=14% Similarity=0.090 Sum_probs=430.4
Q ss_pred CCCCCcEEeCCEEEEEEEc-CCCCeeEEEEEeCCCCCceEEeCCC-C-cCCCCCEEEEeEEE--CCCCcE-EEEEEeccC
Q 004766 81 PRYDAPFKRGNKYFYFHNT-GLQPQSVLYVQDSLDAKAKVLLDPN-T-LSDDGTAALIKVSV--SEDAKY-LAYALSYSG 154 (732)
Q Consensus 81 ~~~~~p~~~g~~~~~~~~~-~~~~~~~l~~r~~~~~~~~~l~D~~-~-l~~~~~~~~~~~~~--SPDG~~-la~~~~~~G 154 (732)
..+..|...|+++||.... ..+....||++. .++..+.|+... . .+....+.-..+.| ||||++ |||+.+.
T Consensus 24 ~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~-- 100 (662)
T 3azo_A 24 GRPACVGAVGDEVWWVAPRPAEAGRATLVRRR-ADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG-- 100 (662)
T ss_dssp SCCEEEEEETTEEEEEEEETTTTTEEEEEEEC-TTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT--
T ss_pred CccceeEEcCCeEEEEecCcccCCcEEEEEEC-CCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC--
Confidence 4566778889998888763 334567799883 345555554332 1 11100111113445 499999 9998654
Q ss_pred CceEEEEEEECC--C-Cceecccc-----cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECC
Q 004766 155 SDWATIKLMRIE--D-QIVEADAL-----SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLG 226 (732)
Q Consensus 155 ~e~~~i~v~dl~--~-g~~~~~~~-----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lg 226 (732)
..+||++++. + ++....+. .......++|||||+.|+|++.+.... .......+||++++.
T Consensus 101 --~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~---------~~~~~~~~i~~~~~~ 169 (662)
T 3azo_A 101 --DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGE---------GPSDVRRFLAAVPLD 169 (662)
T ss_dssp --TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSS---------STTCEEEEEEEEETT
T ss_pred --CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCC---------CCCCceeEEEEEECC
Confidence 2579999998 5 66433322 233457899999999999998652100 001234689999998
Q ss_pred CCC----CCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCc---ceEEEEEEeCC-CCCCCcccccccCCCCCcEEe
Q 004766 227 TKQ----SEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCD---PVNKVYYCDLS-ALPEGLEGFKKRDGLLPFVKL 298 (732)
Q Consensus 227 t~~----~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~---~~~~l~~~d~~-~~~~~~~~~~~~~~~~~~~~l 298 (732)
++. .+...+.+ ....+...++|||||++|++.+.+... ...+||++|++ ++. ....+.+
T Consensus 170 ~~~~~~~~~~~~l~~--~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~-----------~~~~~~l 236 (662)
T 3azo_A 170 GSAAADRSAVRELSD--DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR-----------FADTRTL 236 (662)
T ss_dssp STTTTCGGGSEESSC--SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC-----------EEEEEEE
T ss_pred CCccccCCceeEEEe--cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc-----------ccccEEe
Confidence 721 12223320 223456689999999999998865421 14789999998 331 0013445
Q ss_pred eecc-c-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCc-------eeEEEEecCCEEEEEEec
Q 004766 299 IDGF-D-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDV-------LESATAVNLNQMIVSYLS 369 (732)
Q Consensus 299 ~~~~-~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-------l~~~~~~~~~~l~~~~~~ 369 (732)
..+. . .....|+|||+ ++|.++.++ ..+|+++|+++++ ++.+++...... +..+.+++++++++....
T Consensus 237 ~~~~~~~~~~~~~spdg~-l~~~~~~~~-~~~l~~~~~~~~~-~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 237 LGGPEEAIAQAEWAPDGS-LIVATDRTG-WWNLHRVDPATGA-ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp EEETTBCEEEEEECTTSC-EEEEECTTS-SCEEEEECTTTCC-EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred CCCCCceEcceEECCCCe-EEEEECCCC-CeEEEEEECCCCc-eeecccccccccCccccccCceEeEeCCCEEEEEEEc
Confidence 4432 2 22346999998 888888754 5689999987776 566665432211 346777776788888888
Q ss_pred CCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEeecCCCCCCCCc
Q 004766 370 DVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDRSEF 449 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~~~~~~~~~ 449 (732)
+..+|+++|+++|+ ++.|+.+.+.+..+. +++++.+++..++...|.++|.+|+.+++ .+.+.....+.+++..+
T Consensus 314 -~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~d~~~g~--~~~l~~~~~~~~~~~~~ 388 (662)
T 3azo_A 314 -GAAVLGILDPESGE-LVDAAGPWTEWAATL-TVSGTRAVGVAASPRTAYEVVELDTVTGR--ARTIGARHTDPVDPAYY 388 (662)
T ss_dssp -SSCEEEEEETTTTE-EEECCSSCCEEEEEE-EEETTEEEEEEEETTEEEEEEEEETTTCC--EEEEESCCCCSSCGGGS
T ss_pred -CccEEEEEECCCCc-EEEecCCCCeEEEEE-ecCCCEEEEEEcCCCCCCEEEEEECCCCc--eEEeecCCcccCCcccc
Confidence 88899999998666 477876666665542 56788899999999999999999998885 66666543334554445
Q ss_pred -eEEEEEEEccCCCeeEEEEEEEcCCCC----CCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCC
Q 004766 450 -HVHQVFVPSKDGSTKIPMFIVSKKNIK----LDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGE 524 (732)
Q Consensus 450 -~~~~~~~~s~dG~~~i~~~~~~p~~~~----~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~ 524 (732)
..+.+.+++.+| .+|+++++.|++.. .+++.|+||++||+++....+.|.... ..|+++||+|+++|+||+++
T Consensus 389 ~~~~~~~~~~~dg-~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~ 466 (662)
T 3azo_A 389 PEPQIRTFTAPDG-REIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDV-AYFTSRGIGVADVNYGGSTG 466 (662)
T ss_dssp CCCEEEEEECTTS-CEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHH-HHHHTTTCEEEEEECTTCSS
T ss_pred CcceEEEEEcCCC-CEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHH-HHHHhCCCEEEEECCCCCCC
Confidence 468889998899 99999999998754 457899999999999887767777654 45555999999999999999
Q ss_pred CchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc-
Q 004766 525 YGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK- 603 (732)
Q Consensus 525 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~- 603 (732)
+|+.|........+...++|+.+++++|++++++|++||+|+|+|+||+++++++.+ |++|+|+|+.+|+.|+..+..
T Consensus 467 ~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~ 545 (662)
T 3azo_A 467 YGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADG 545 (662)
T ss_dssp SCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTT
T ss_pred ccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhcc
Confidence 999999887777777889999999999999999999999999999999999999887 999999999999999866543
Q ss_pred CCC--CCccc-cccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhc
Q 004766 604 FTI--GHAWV-SDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLC 680 (732)
Q Consensus 604 ~~~--~~~~~-~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~ 680 (732)
... ...+. ..+|.+. +..+.+..+||+.++.+ +.+|+||+||.+|.+||+.++.+++++|+++
T Consensus 546 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~sp~~~~~~----------~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~-- 611 (662)
T 3azo_A 546 GTHDFESRYLDFLIGSFE--EFPERYRDRAPLTRADR----------VRVPFLLLQGLEDPVCPPEQCDRFLEAVAGC-- 611 (662)
T ss_dssp CSCGGGTTHHHHHTCCTT--TCHHHHHHTCGGGGGGG----------CCSCEEEEEETTCSSSCTHHHHHHHHHHTTS--
T ss_pred cccchhhHhHHHHhCCCc--cchhHHHhhChHhHhcc----------CCCCEEEEeeCCCCCCCHHHHHHHHHHHHHc--
Confidence 111 11111 1245432 22345678899998887 6789999999999999999999999999987
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCc
Q 004766 681 TSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGASW 730 (732)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 730 (732)
++++++++++++||++..... ..+..+.+++||.++|+...
T Consensus 612 --------g~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~fl~~~l~~~~ 652 (662)
T 3azo_A 612 --------GVPHAYLSFEGEGHGFRRKET-MVRALEAELSLYAQVFGVEV 652 (662)
T ss_dssp --------CCCEEEEEETTCCSSCCSHHH-HHHHHHHHHHHHHHHTTCCC
T ss_pred --------CCCEEEEEECCCCCCCCChHH-HHHHHHHHHHHHHHHhCCCC
Confidence 899999999999999876544 36788899999999998753
No 8
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=7.3e-51 Score=476.23 Aligned_cols=584 Identities=12% Similarity=0.089 Sum_probs=411.1
Q ss_pred EEeCCEEEEEEEcCCC----CeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEE
Q 004766 87 FKRGNKYFYFHNTGLQ----PQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKL 162 (732)
Q Consensus 87 ~~~g~~~~~~~~~~~~----~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v 162 (732)
+++|.+++|..++... ....+|+.+..+++.+.|... ...+..++|||||++|||+.+ .+||+
T Consensus 70 Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~-------~~~~~~~~~SPdG~~la~~~~------~~i~~ 136 (740)
T 4a5s_A 70 SPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERI-------PNNTQWVTWSPVGHKLAYVWN------NDIYV 136 (740)
T ss_dssp CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-------CTTEEEEEECSSTTCEEEEET------TEEEE
T ss_pred CCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccC-------CCcceeeEECCCCCEEEEEEC------CeEEE
Confidence 3477787777653221 124566666554443222211 112568999999999999953 37999
Q ss_pred EECCCCceecccccce-------------------eeeeEEEEeCCcEEEEEEecCCCCC-CC---CCCC--Cc------
Q 004766 163 MRIEDQIVEADALSWF-------------------KFSSIAWTHDSKGFFYSRYPAPKEG-KD---MDAG--TE------ 211 (732)
Q Consensus 163 ~dl~~g~~~~~~~~~~-------------------~~~~~~WspDg~~l~y~~~~~~~~~-~~---~~~~--~~------ 211 (732)
+|+.+|+....+..+. ....++|||||+.|+|.+.+..... .. .... ..
T Consensus 137 ~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~ 216 (740)
T 4a5s_A 137 KIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRV 216 (740)
T ss_dssp ESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEE
T ss_pred EECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceee
Confidence 9999988544332211 0124899999999999987653110 00 0000 00
Q ss_pred ---c--cCCcccEEEEEECCC---CCCCCeEEEecC----CCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCC
Q 004766 212 ---T--DSNLYHEFYYHFLGT---KQSEDILCWKDP----EHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 212 ---~--~~~~~~~v~~~~lgt---~~~~~~~v~~~~----~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
. ......+|+++++.+ +......-...+ .+..++..++|||||+.+++..++.. ....|+++|++++
T Consensus 217 ~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~-~~~~i~~~d~~tg 295 (740)
T 4a5s_A 217 PYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ-NYSVMDICDYDES 295 (740)
T ss_dssp ECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST-TEEEEEEEEEETT
T ss_pred cCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC-CEEEEEEEECCCC
Confidence 0 001123689999987 532111112111 13457789999999998887776543 3567999999875
Q ss_pred C----CCcccccccCCCCCcEEee-e---ccc----ceEEEEEecCCeEE-EEeCCCCCCceEEEEeCCCCCCceEeccC
Q 004766 280 P----EGLEGFKKRDGLLPFVKLI-D---GFD----AQYEVIANDDTVFT-FLTNKDAPKYKIIRVDLKEPNDWFEVIPE 346 (732)
Q Consensus 280 ~----~~~~~~~~~~~~~~~~~l~-~---~~~----~~~~~~s~dg~~l~-~~s~~~~~~~~l~~~d~~~~~~~~~l~~~ 346 (732)
. +.. ...+. . ++. .....|+|||+.|+ +.+.+++ ..+|+++|++++. .+.|+..
T Consensus 296 ~~~~~~~~-----------~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G-~~~l~~~~~~~~~-~~~lT~g 362 (740)
T 4a5s_A 296 SGRWNCLV-----------ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG-YRHICYFQIDKKD-CTFITKG 362 (740)
T ss_dssp TTEEEECG-----------GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS-CEEEEEEETTCSS-CEESCCS
T ss_pred ccccceeE-----------EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC-ceEEEEEECCCCc-eEecccC
Confidence 4 110 11111 1 111 11346999999988 6666654 6789999998876 4566654
Q ss_pred CCCCceeEEEEecCCEEEEEEec----CCeeEEEEEeCCCCceeeecccc----cceeeEeecccCCcEEEEEEecCCCC
Q 004766 347 AERDVLESATAVNLNQMIVSYLS----DVKYVLQIRDLKNGSLLHQLPIE----IGSVNAISARREDSVVFISFTSFLIP 418 (732)
Q Consensus 347 ~~~~~l~~~~~~~~~~l~~~~~~----~g~~~l~~~d~~~g~~~~~l~~~----~g~v~~~~~s~d~~~l~~~~ss~~~p 418 (732)
. ..+..+...+++.|++.... .+..+|+++++++++..+.|+.. .+.+..++++++++.+++.++++. |
T Consensus 363 ~--~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~-~ 439 (740)
T 4a5s_A 363 T--WEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPG-L 439 (740)
T ss_dssp S--SCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBS-S
T ss_pred C--EEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCC-C
Confidence 3 33444433335788888876 45679999999744432356532 355667889999999999999987 8
Q ss_pred ceEEEEECCCCCCceEEEEeec-C-CCCCCCCc-eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccC
Q 004766 419 GIVYQCNLKTETPEMKIFRETI-I-PGFDRSEF-HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV 495 (732)
Q Consensus 419 ~~~y~~d~~~~~~~~~~l~~~~-~-~~~~~~~~-~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~ 495 (732)
+.++.++..+++ ...++.... . +.++...+ .++.+.+ +.|| .+|+++++.|+++...+++|+||++||+++...
T Consensus 440 p~~~l~~~~~~~-~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~dg-~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~ 516 (740)
T 4a5s_A 440 PLYTLHSSVNDK-GLRVLEDNSALDKMLQNVQMPSKKLDFI-ILNE-TKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQK 516 (740)
T ss_dssp CEEEEEETTTTE-EEEEEECCHHHHHHHTTEECCEEEEEEE-EETT-EEEEEEEEECTTCCTTSCEEEEEECCCCTTCCC
T ss_pred CEEEEEECCCCc-EEEEeccChhhhhhhhhccCCccEEEEE-ccCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCcccc
Confidence 899999988774 234443211 0 11222233 4455666 7799 999999999998777789999999999987743
Q ss_pred -CCCcChhHHHHHH-hcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHH
Q 004766 496 -TPSFSVSRTILMR-HLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGL 573 (732)
Q Consensus 496 -~~~~~~~~~~~l~-~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~ 573 (732)
...|...+...+. ++||+|+++|+||+|++|..|........+...++|+.+++++|++++++|++||+|+|+|+||+
T Consensus 517 ~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~ 596 (740)
T 4a5s_A 517 ADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGY 596 (740)
T ss_dssp CCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHH
T ss_pred cccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHH
Confidence 3444433434444 58999999999999999999999988888888999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccc-cCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCC-Ce
Q 004766 574 LVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSD-FGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQY-PS 651 (732)
Q Consensus 574 l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~-~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~-~p 651 (732)
+++.++.++|++|+|+|+.+|+.|+..+.. .|... +|.|...+..+.+...+|+.++++ +. +|
T Consensus 597 ~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~-----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----------i~~~P 661 (740)
T 4a5s_A 597 VTSMVLGSGSGVFKCGIAVAPVSRWEYYDS-----VYTERYMGLPTPEDNLDHYRNSTVMSRAEN----------FKQVE 661 (740)
T ss_dssp HHHHHHTTTCSCCSEEEEESCCCCGGGSBH-----HHHHHHHCCSSTTTTHHHHHHSCSGGGGGG----------GGGSE
T ss_pred HHHHHHHhCCCceeEEEEcCCccchHHhhh-----HHHHHHcCCCCccccHHHHHhCCHHHHHhc----------CCCCc
Confidence 999999999999999999999999865432 22222 355532333445678899988887 45 49
Q ss_pred EEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC
Q 004766 652 TLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 652 ~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
+||+||.+|.+||+.++.+++++|+++ +++++++++|++||++..... ..+.+..+.+||.++|+..
T Consensus 662 ~Lii~G~~D~~v~~~~~~~l~~~l~~~----------g~~~~~~~~~~~~H~~~~~~~-~~~~~~~i~~fl~~~l~~~ 728 (740)
T 4a5s_A 662 YLLIHGTADDNVHFQQSAQISKALVDV----------GVDFQAMWYTDEDHGIASSTA-HQHIYTHMSHFIKQCFSLP 728 (740)
T ss_dssp EEEEEETTCSSSCTHHHHHHHHHHHHT----------TCCCEEEEETTCCTTCCSHHH-HHHHHHHHHHHHHHHTTCC
T ss_pred EEEEEcCCCCccCHHHHHHHHHHHHHC----------CCCeEEEEECCCCCcCCCCcc-HHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999998 899999999999999865544 3678889999999999764
No 9
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=5.1e-49 Score=448.42 Aligned_cols=553 Identities=14% Similarity=0.138 Sum_probs=403.5
Q ss_pred HHHHHHHHHhhcCCCCCCCc-EEeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcE
Q 004766 67 RDKLREKITKLFDSPRYDAP-FKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKY 145 (732)
Q Consensus 67 ~~~l~~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~ 145 (732)
..++.+.++.+...+-.++- +++|.+++|.....+ ...||... +++.+.|+... ...+..+.|||| +
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~DG~~la~~s~~~g--~~~lw~~~--~g~~~~lt~~~------~~~~~~~~~spd--~ 76 (582)
T 3o4h_A 9 FSRIVRDVERLIAVEKYSLQGVVDGDKLLVVGFSEG--SVNAYLYD--GGETVKLNREP------INSVLDPHYGVG--R 76 (582)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEEETTTEEEEEEEETT--EEEEEEEE--TTEEEECCSSC------CSEECEECTTCS--E
T ss_pred HHHHHHHHHHHhccchheeecCCCCCeEEEEEccCC--ceeEEEEc--CCCcEeeeccc------ccccccccCCCC--e
Confidence 34455556655544433332 457888888876333 35688863 34444444321 124568999999 6
Q ss_pred EEEEEec-cCCceEEEEEEEC--CCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEE
Q 004766 146 LAYALSY-SGSDWATIKLMRI--EDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYY 222 (732)
Q Consensus 146 la~~~~~-~G~e~~~i~v~dl--~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 222 (732)
++|+.+. +|.+...||++++ .++........+ ....+|||||+.++|++... ..+.+
T Consensus 77 ~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~~~--~~~~~~s~dg~~~~~~s~~~------------------~~~~l 136 (582)
T 3o4h_A 77 VILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKP--MRILSGVDTGEAVVFTGATE------------------DRVAL 136 (582)
T ss_dssp EEEEEECSTTSCCEEEEEEETTSTTCCEECTTSCS--BEEEEEEECSSCEEEEEECS------------------SCEEE
T ss_pred EEEEeccCCCCcceEEEEEeccCCCccccccCCCC--ceeeeeCCCCCeEEEEecCC------------------CCceE
Confidence 8888775 5666788999998 655432112222 24679999999998886432 12336
Q ss_pred EECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc
Q 004766 223 HFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF 302 (732)
Q Consensus 223 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~ 302 (732)
|++.++.. ..+...+. .+++|||||++|++.+.+... ...||++|+++++ .+.++...
T Consensus 137 ~d~~~g~~--~~l~~~~~-----~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~--------------~~~l~~~~ 194 (582)
T 3o4h_A 137 YALDGGGL--RELARLPG-----FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGG--------------LRVFDSGE 194 (582)
T ss_dssp EEEETTEE--EEEEEESS-----CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCC--------------CEEECCSS
T ss_pred EEccCCcE--EEeecCCC-----ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCC--------------ceEeecCC
Confidence 67766532 23443322 478999999999988765432 3569999998753 34454432
Q ss_pred cc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEE--------EecCCEEEEEEecCCee
Q 004766 303 DA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESAT--------AVNLNQMIVSYLSDVKY 373 (732)
Q Consensus 303 ~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~--------~~~~~~l~~~~~~~g~~ 373 (732)
.. ....|||||+.|+ .++.++ ..+|+++|++++. .+ ++... ...+..+. |++|+.++++...++.
T Consensus 195 ~~~~~~~~SpDG~~l~-~~~~~~-~~~i~~~d~~~~~-~~-~~~~~-~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~- 268 (582)
T 3o4h_A 195 GSFSSASISPGMKVTA-GLETAR-EARLVTVDPRDGS-VE-DLELP-SKDFSSYRPTAITWLGYLPDGRLAVVARREGR- 268 (582)
T ss_dssp CEEEEEEECTTSCEEE-EEECSS-CEEEEEECTTTCC-EE-ECCCS-CSHHHHHCCSEEEEEEECTTSCEEEEEEETTE-
T ss_pred CccccceECCCCCEEE-EccCCC-eeEEEEEcCCCCc-EE-EccCC-CcChhhhhhccccceeEcCCCcEEEEEEcCCc-
Confidence 22 2346999999988 444433 4689999999887 34 44432 23344445 8887788888888875
Q ss_pred EEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEeecCCCCCC----CCc
Q 004766 374 VLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDR----SEF 449 (732)
Q Consensus 374 ~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~~~~~~----~~~ 449 (732)
+.+|++ |+..+ .+.+.+..++++ ++. ++++.++..+|+++|.+|+.+ + .+.+ .+++ ...
T Consensus 269 -~~l~~~--g~~~~---~~~~~v~~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~-~--~~~l------~~~~~~~~~~~ 331 (582)
T 3o4h_A 269 -SAVFID--GERVE---APQGNHGRVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE-P--LLEG------GLPEDLRRSIA 331 (582)
T ss_dssp -EEEEET--TEEEC---CCSSEEEEEEEE-TTE-EEEEEEETTEEEEEEEETTCC-E--EECC------CCCHHHHHTEE
T ss_pred -EEEEEE--CCeec---cCCCceEEEEec-CCE-EEEEEcCCCCCCeEEEEcCCC-c--eEEE------ecCCccccccC
Confidence 455555 65532 234667778888 664 668889999999999999764 2 3333 1232 223
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhH
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 529 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~ 529 (732)
..+.+.+++.+| .+|+++++.|++.. .+.|+||++||+++......|.... ..|+++||+|+++|+||++++|..|
T Consensus 332 ~~~~~~~~~~~g-~~i~~~~~~p~~~~--~~~p~vv~~HG~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~G~s~ 407 (582)
T 3o4h_A 332 GSRLVWVESFDG-SRVPTYVLESGRAP--TPGPTVVLVHGGPFAEDSDSWDTFA-ASLAAAGFHVVMPNYRGSTGYGEEW 407 (582)
T ss_dssp EEEEEEEECTTS-CEEEEEEEEETTSC--SSEEEEEEECSSSSCCCCSSCCHHH-HHHHHTTCEEEEECCTTCSSSCHHH
T ss_pred cceEEEEECCCC-CEEEEEEEcCCCCC--CCCcEEEEECCCcccccccccCHHH-HHHHhCCCEEEEeccCCCCCCchhH
Confidence 678899999999 99999999998753 4899999999998876667776654 4455599999999999999999999
Q ss_pred HhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCc
Q 004766 530 HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHA 609 (732)
Q Consensus 530 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~ 609 (732)
............++|+.+++++|++++.+| ||+|+|+|+||++++.++.++|++|+++|+.+|+.|+..+........
T Consensus 408 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~ 485 (582)
T 3o4h_A 408 RLKIIGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAF 485 (582)
T ss_dssp HHTTTTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHH
T ss_pred HhhhhhhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccchh
Confidence 998888888889999999999999998887 999999999999999999999999999999999999876554222111
Q ss_pred --ccc-ccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCC
Q 004766 610 --WVS-DFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENS 686 (732)
Q Consensus 610 --~~~-~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 686 (732)
|.. .+| .++ +.+..++|+.++.+ +.+|+|++||++|.+||+.++.+++++|+++
T Consensus 486 ~~~~~~~~~--~~~---~~~~~~sp~~~~~~----------i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~-------- 542 (582)
T 3o4h_A 486 RNFIEQLTG--GSR---EIMRSRSPINHVDR----------IKEPLALIHPQNASRTPLKPLLRLMGELLAR-------- 542 (582)
T ss_dssp HHHHHHHTT--TCH---HHHHHTCGGGGGGG----------CCSCEEEEEETTCSSSCHHHHHHHHHHHHHT--------
T ss_pred HHHHHHHcC--cCH---HHHHhcCHHHHHhc----------CCCCEEEEecCCCCCcCHHHHHHHHHHHHhC--------
Confidence 222 233 333 44678899998887 7899999999999999999999999999998
Q ss_pred CCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 687 PQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 687 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
|+++++++++++||++..... ..+.+..+.+||.++|+.
T Consensus 543 --g~~~~~~~~~~~gH~~~~~~~-~~~~~~~i~~fl~~~l~~ 581 (582)
T 3o4h_A 543 --GKTFEAHIIPDAGHAINTMED-AVKILLPAVFFLATQRER 581 (582)
T ss_dssp --TCCEEEEEETTCCSSCCBHHH-HHHHHHHHHHHHHHHHTC
T ss_pred --CCCEEEEEECCCCCCCCChHH-HHHHHHHHHHHHHHHcCC
Confidence 899999999999999885544 467888999999999864
No 10
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=3.1e-47 Score=446.64 Aligned_cols=567 Identities=14% Similarity=0.131 Sum_probs=402.3
Q ss_pred CCCcEE--eCCEEEEEEEcCCCCeeEEEEEeCCCC---CceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCce
Q 004766 83 YDAPFK--RGNKYFYFHNTGLQPQSVLYVQDSLDA---KAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDW 157 (732)
Q Consensus 83 ~~~p~~--~g~~~~~~~~~~~~~~~~l~~r~~~~~---~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~ 157 (732)
+..+.+ +|.++++... ..||+.+..++ ....+... ...+..++|||||++|||+.+
T Consensus 111 v~~~~~SpDg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~-------~~~~~~~~~SPDG~~la~~~~------ 171 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG------GELYLYDLKQEGKAAVRQLTHG-------EGFATDAKLSPKGGFVSFIRG------ 171 (741)
T ss_dssp SCCCEECTTSSEEEEEET------TEEEEEESSSCSTTSCCBCCCS-------SSCEEEEEECTTSSEEEEEET------
T ss_pred cceeEECCCCCEEEEEeC------CcEEEEECCCCCcceEEEcccC-------CcccccccCCCCCCEEEEEeC------
Confidence 344444 6777777653 34676665444 33333221 123668999999999999963
Q ss_pred EEEEEEECCCCceeccccccee-----------------eeeEEEEeCCcEEEEEEecCCCCCC----------------
Q 004766 158 ATIKLMRIEDQIVEADALSWFK-----------------FSSIAWTHDSKGFFYSRYPAPKEGK---------------- 204 (732)
Q Consensus 158 ~~i~v~dl~~g~~~~~~~~~~~-----------------~~~~~WspDg~~l~y~~~~~~~~~~---------------- 204 (732)
.+|+++|+.+|+....+..... ...++|||||+.|+|.+.+......
T Consensus 172 ~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~ 251 (741)
T 2ecf_A 172 RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQ 251 (741)
T ss_dssp TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence 1799999999885543322111 2579999999999999765421000
Q ss_pred CCC-CCCcccCCcccEEEEEECCC-CCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCC
Q 004766 205 DMD-AGTETDSNLYHEFYYHFLGT-KQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEG 282 (732)
Q Consensus 205 ~~~-~~~~~~~~~~~~v~~~~lgt-~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 282 (732)
.+. .+ +......|+++++.+ +... .+............++| |||++|++...........|+++|++++.
T Consensus 252 ~~~~~g---~~~~~~~l~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~-- 323 (741)
T 2ecf_A 252 RYPAAG---DANVQVKLGVISPAEQAQTQ--WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ-- 323 (741)
T ss_dssp ECCBTT---SCCCEEEEEEECSSTTCCCE--EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC--
T ss_pred ecCCCC---CCCCeeEEEEEECCCCCceE--EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc--
Confidence 000 00 001223788899877 5432 22211123456678999 99999998876554456889999998753
Q ss_pred cccccccCCCCCcEEeeecccc------eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEE-
Q 004766 283 LEGFKKRDGLLPFVKLIDGFDA------QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESA- 355 (732)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~------~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~- 355 (732)
...+...... ....|+|||+ +++.++.++ ..+|+.+++++. .+.+..+. ..+..+
T Consensus 324 ------------~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g-~~~l~~~~~~~~--~~~l~~~~--~~v~~~~ 385 (741)
T 2ecf_A 324 ------------QRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTG-FQHLYRIDSKGK--AAALTHGN--WSVDELL 385 (741)
T ss_dssp ------------EEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTS-SCEEEEECSSSC--EEESCCSS--SCEEEEE
T ss_pred ------------eEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCC-ccEEEEEcCCCC--eeeeeecc--eEEEeEe
Confidence 2222221111 1235999998 666666544 568999997654 46665543 445555
Q ss_pred EEecC-CEEEEEEecCC--eeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCCc
Q 004766 356 TAVNL-NQMIVSYLSDV--KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPE 432 (732)
Q Consensus 356 ~~~~~-~~l~~~~~~~g--~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~ 432 (732)
.++++ +.+++....++ ..+||.++.+ |+..+.|+. ...+..+++++|++.+++.+++..+|+++|.++..++ .
T Consensus 386 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~-g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~--~ 461 (741)
T 2ecf_A 386 AVDEKAGLAYFRAGIESARESQIYAVPLQ-GGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE--K 461 (741)
T ss_dssp EEETTTTEEEEEECSSCTTCBEEEEEETT-CCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC--E
T ss_pred EEeCCCCEEEEEEeCCCCceEEEEEEEcC-CCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC--e
Confidence 57775 46777777765 4567777765 554466764 3445678899999999999999999999999998655 2
Q ss_pred eEEEEeecC--C--CCCCC--Cc-eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC-CCcCh---
Q 004766 433 MKIFRETII--P--GFDRS--EF-HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSV--- 501 (732)
Q Consensus 433 ~~~l~~~~~--~--~~~~~--~~-~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~-~~~~~--- 501 (732)
.+.+..... . .+... .+ ..+.+.+++.||..+|+++++.|++....++.|+||++||+++.... ..|..
T Consensus 462 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~ 541 (741)
T 2ecf_A 462 IATLVENDLADPKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGD 541 (741)
T ss_dssp EECSSCCCSSSTTSTTHHHHTTCCCEEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHH
T ss_pred EEEeccCcccccccchhhhhccCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccch
Confidence 444432111 0 12222 34 67889999877635899999999876556779999999999876432 23442
Q ss_pred -hHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHh
Q 004766 502 -SRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACIN 580 (732)
Q Consensus 502 -~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 580 (732)
.+...|+++||+|+++|+||+|++|..|........+...++|+.+++++|.+++.+|++||+|+|+|+||++++.++.
T Consensus 542 ~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~ 621 (741)
T 2ecf_A 542 HLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLA 621 (741)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHH
T ss_pred hHHHHHHHhCCCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHH
Confidence 2456666699999999999999999999888777777788999999999999998899999999999999999999999
Q ss_pred hCCCeeeEEEEcCCcccccccccCCCCCccccc-cCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCC
Q 004766 581 QRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSD-FGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADH 659 (732)
Q Consensus 581 ~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~-~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~ 659 (732)
++|++|+++|+.+|+.++..+.. .|... ++.|.. ..+.+...+|+..+.+ +.+|+||+||.+
T Consensus 622 ~~p~~~~~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----------i~~P~lii~G~~ 684 (741)
T 2ecf_A 622 KASDSYACGVAGAPVTDWGLYDS-----HYTERYMDLPAR--NDAGYREARVLTHIEG----------LRSPLLLIHGMA 684 (741)
T ss_dssp HCTTTCSEEEEESCCCCGGGSBH-----HHHHHHHCCTGG--GHHHHHHHCSGGGGGG----------CCSCEEEEEETT
T ss_pred hCCCceEEEEEcCCCcchhhhcc-----ccchhhcCCccc--ChhhhhhcCHHHHHhh----------CCCCEEEEccCC
Confidence 99999999999999988753221 12122 244432 1233567799888876 688999999999
Q ss_pred CCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 660 DDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 660 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
|.+||+.++.+++++|+.. ++++++++++++||++..... .+....+.+||.++|+
T Consensus 685 D~~v~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~H~~~~~~~--~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 685 DDNVLFTNSTSLMSALQKR----------GQPFELMTYPGAKHGLSGADA--LHRYRVAEAFLGRCLK 740 (741)
T ss_dssp CSSSCTHHHHHHHHHHHHT----------TCCCEEEEETTCCSSCCHHHH--HHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHC----------CCceEEEEECCCCCCCCCCch--hHHHHHHHHHHHHhcC
Confidence 9999999999999999987 889999999999999875433 5677889999999986
No 11
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=7.1e-47 Score=441.02 Aligned_cols=561 Identities=15% Similarity=0.128 Sum_probs=397.0
Q ss_pred CEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC---
Q 004766 91 NKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED--- 167 (732)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~--- 167 (732)
++++|... ..+|+.+..+++...++.... .+..++|||||++|||+.+ .+|+++|+.+
T Consensus 93 ~~~~~~~~------~~i~~~d~~~~~~~~l~~~~~-------~~~~~~~SpdG~~la~~~~------~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 93 GLVVLFTQ------GGLVGFDMLARKVTYLFDTNE-------ETASLDFSPVGDRVAYVRN------HNLYIARGGKLGE 153 (706)
T ss_dssp TEEEEEET------TEEEEEETTTTEEEEEECCTT-------CCTTCEECTTSSEEEEEET------TEEEEEECBCTTS
T ss_pred CeEEEEEC------CEEEEEECCCCceEEccCCcc-------cccCCcCCCCCCEEEEEEC------CeEEEEecCcccc
Confidence 56666532 336666655554444444321 1346899999999999742 3799999998
Q ss_pred --Cceeccccccee---------------eeeEEEEeCCcEEEEEEecCCCCCC----CCCCC-C---------cccCCc
Q 004766 168 --QIVEADALSWFK---------------FSSIAWTHDSKGFFYSRYPAPKEGK----DMDAG-T---------ETDSNL 216 (732)
Q Consensus 168 --g~~~~~~~~~~~---------------~~~~~WspDg~~l~y~~~~~~~~~~----~~~~~-~---------~~~~~~ 216 (732)
|+....+..... ...++|||||+.|+|.+.+...... ..... . .-....
T Consensus 154 ~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~ 233 (706)
T 2z3z_A 154 GMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSH 233 (706)
T ss_dssp CCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCC
T ss_pred cCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCC
Confidence 875432221111 2689999999999999854321000 00000 0 000113
Q ss_pred ccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcE
Q 004766 217 YHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFV 296 (732)
Q Consensus 217 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 296 (732)
..+|+++++.++... .+............++|||||++|++...+.......|+++|++++. ..+
T Consensus 234 ~~~l~~~d~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~-------------~~~ 298 (706)
T 2z3z_A 234 HVTVGIYHLATGKTV--YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR-------------FVR 298 (706)
T ss_dssp EEEEEEEETTTTEEE--ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC-------------EEE
T ss_pred eeEEEEEECCCCceE--eeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc-------------eee
Confidence 357999999775422 22211122345678999999999998776554446789999998751 122
Q ss_pred Eeeecccc------eEEEEEe--cCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeE-EEEecC-CEEEEE
Q 004766 297 KLIDGFDA------QYEVIAN--DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLES-ATAVNL-NQMIVS 366 (732)
Q Consensus 297 ~l~~~~~~------~~~~~s~--dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~-~~~~~~-~~l~~~ 366 (732)
.+...... ....|+| ||+ +++.+++++ ..+|+.++.++.. .+.+..+. ..+.. +.++++ +.|++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g-~~~l~~~~~~~~~-~~~l~~~~--~~v~~~~~~spdg~~l~~~ 373 (706)
T 2z3z_A 299 TLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDG-WNHLYLYDTTGRL-IRQVTKGE--WEVTNFAGFDPKGTRLYFE 373 (706)
T ss_dssp EEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTS-SCEEEEEETTSCE-EEECCCSS--SCEEEEEEECTTSSEEEEE
T ss_pred EEEEccCCCeECccCCceeecCCCCE-EEEEEccCC-ccEEEEEECCCCE-EEecCCCC--eEEEeeeEEcCCCCEEEEE
Confidence 22221111 1125899 887 555666543 5789999976543 45555443 33444 678875 467777
Q ss_pred EecCC--eeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEeecCCCC
Q 004766 367 YLSDV--KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGF 444 (732)
Q Consensus 367 ~~~~g--~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~~~~~~~ 444 (732)
...++ ...|+.+++++|+. +.++ +...+..+++++|++.+++..++...|++++.+|+.+++ .+.+... . .+
T Consensus 374 ~~~~~~~~~~l~~~d~~~~~~-~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~--~~~~~~~-~-~~ 447 (706)
T 2z3z_A 374 STEASPLERHFYCIDIKGGKT-KDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS--HTLLEAK-N-PD 447 (706)
T ss_dssp ESSSCTTCBEEEEEETTCCCC-EESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE--EEEEECC-----
T ss_pred ecCCCCceEEEEEEEcCCCCc-eecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe--Eeecccc-c-hh
Confidence 76655 45899999986664 5665 334466788999999999999999999999999998873 4444432 1 13
Q ss_pred CCCCc-eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC-CCcChh---HHHHHHhcCcEEEEEcc
Q 004766 445 DRSEF-HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVS---RTILMRHLGAVFCIANI 519 (732)
Q Consensus 445 ~~~~~-~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~-~~~~~~---~~~~l~~~G~~v~~~~~ 519 (732)
....+ ..+.+.+++.||..+++++++.|+++..++++|+||++||+++.... ..|... +...|+++||+|+++|+
T Consensus 448 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~ 527 (706)
T 2z3z_A 448 TGYAMPEIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDS 527 (706)
T ss_dssp ---CCCCEEEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEec
Confidence 22223 56778888877735899999999987666789999999999876532 345543 45667669999999999
Q ss_pred cCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccc
Q 004766 520 RGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDML 599 (732)
Q Consensus 520 rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~ 599 (732)
||+|++|..|........+...++|+.+++++|.+++.+|++|++|+|+|+||++++.++.++|++|+++|+.+|+.++.
T Consensus 528 rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~ 607 (706)
T 2z3z_A 528 RGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWN 607 (706)
T ss_dssp TTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGG
T ss_pred CCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchH
Confidence 99999999998887777778889999999999999988999999999999999999999999999999999999999875
Q ss_pred ccccCCCCCccccc-cCCCC-CHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHH
Q 004766 600 RYHKFTIGHAWVSD-FGCSE-EEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQY 677 (732)
Q Consensus 600 ~~~~~~~~~~~~~~-~g~p~-~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~ 677 (732)
.+.. .|... ++.|. +++ .+...+|...+.+ +.+|+||+||.+|.+||+.++.+++++|++
T Consensus 608 ~~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------i~~P~lii~G~~D~~v~~~~~~~~~~~l~~ 669 (706)
T 2z3z_A 608 RYAI-----MYGERYFDAPQENPE---GYDAANLLKRAGD----------LKGRLMLIHGAIDPVVVWQHSLLFLDACVK 669 (706)
T ss_dssp GSBH-----HHHHHHHCCTTTCHH---HHHHHCGGGGGGG----------CCSEEEEEEETTCSSSCTHHHHHHHHHHHH
T ss_pred HHHh-----hhhhhhcCCcccChh---hhhhCCHhHhHHh----------CCCCEEEEeeCCCCCCCHHHHHHHHHHHHH
Confidence 4321 12222 35553 333 3567788888776 679999999999999999999999999998
Q ss_pred hhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 678 VLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
+ +++++++++|++||++... . ..+.+..+.+||.++|
T Consensus 670 ~----------~~~~~~~~~~~~gH~~~~~-~-~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 670 A----------RTYPDYYVYPSHEHNVMGP-D-RVHLYETITRYFTDHL 706 (706)
T ss_dssp H----------TCCCEEEEETTCCSSCCTT-H-HHHHHHHHHHHHHHHC
T ss_pred C----------CCCeEEEEeCCCCCCCCcc-c-HHHHHHHHHHHHHHhC
Confidence 8 8899999999999998765 2 3577888999999875
No 12
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-47 Score=445.68 Aligned_cols=583 Identities=13% Similarity=0.082 Sum_probs=396.7
Q ss_pred EeCCEEEEEEEcCC----CCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEE
Q 004766 88 KRGNKYFYFHNTGL----QPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLM 163 (732)
Q Consensus 88 ~~g~~~~~~~~~~~----~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 163 (732)
++|.+++|.....+ .....||+.+..+++. +....+.. .+..++|||||++|||+.+ .+|+++
T Consensus 69 pDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~---~~~~~l~~----~~~~~~~SPDG~~la~~~~------~~i~~~ 135 (719)
T 1z68_A 69 PDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF---VRGNELPR----PIQYLCWSPVGSKLAYVYQ------NNIYLK 135 (719)
T ss_dssp TTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE---CCSSCCCS----SBCCEEECSSTTCEEEEET------TEEEEE
T ss_pred CCCCeEEEEecCceeEEeecceEEEEEECCCCcc---ccceecCc----ccccceECCCCCEEEEEEC------CeEEEE
Confidence 37778887754221 0124577777654432 11111211 1347999999999999952 289999
Q ss_pred ECCCCceecccccce-------------------eeeeEEEEeCCcEEEEEEecCCCCC-C---CCCCCC----------
Q 004766 164 RIEDQIVEADALSWF-------------------KFSSIAWTHDSKGFFYSRYPAPKEG-K---DMDAGT---------- 210 (732)
Q Consensus 164 dl~~g~~~~~~~~~~-------------------~~~~~~WspDg~~l~y~~~~~~~~~-~---~~~~~~---------- 210 (732)
|+.+|+....+..+. ....++|||||+.|+|.+.+..... . ......
T Consensus 136 ~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp 215 (719)
T 1z68_A 136 QRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYP 215 (719)
T ss_dssp SSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECC
T ss_pred eCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCC
Confidence 999887543321110 1147999999999999986542100 0 000000
Q ss_pred -cccCCcccEEEEEECCCCCCC-CeEEEe---cCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEe----CCCCCC
Q 004766 211 -ETDSNLYHEFYYHFLGTKQSE-DILCWK---DPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCD----LSALPE 281 (732)
Q Consensus 211 -~~~~~~~~~v~~~~lgt~~~~-~~~v~~---~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d----~~~~~~ 281 (732)
.-......+|+++++.++... .+.+.. ...+..+...++|||||+.++.... ......+|+++| +.++..
T Consensus 216 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~-~~~~~~~l~~~d~~~~~~~g~~ 294 (719)
T 1z68_A 216 KAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK-RVQNVSVLSICDFREDWQTWDC 294 (719)
T ss_dssp BTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE-SSTTEEEEEEEEECSSSSSEEC
T ss_pred CCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec-cccCeEEEEEEcccCCCCCCce
Confidence 000012237888888765421 011100 0123456678999999875554333 333457899999 766431
Q ss_pred CcccccccCCCCCcE---Eeeecccc----eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeE
Q 004766 282 GLEGFKKRDGLLPFV---KLIDGFDA----QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLES 354 (732)
Q Consensus 282 ~~~~~~~~~~~~~~~---~l~~~~~~----~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~ 354 (732)
. .+ .. .-..++.. ....|+|||+.+++.+.......+|+.+|++++. .+.|..+. ..+..
T Consensus 295 ~--~~--------~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~--~~v~~ 361 (719)
T 1z68_A 295 P--KT--------QEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGK--WEAIN 361 (719)
T ss_dssp C--GG--------GEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSS--SCEEE
T ss_pred E--EE--------EecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCc--eEEEE
Confidence 1 00 10 00011111 0346999999998865544446789999998876 56665443 33444
Q ss_pred EEEecCCEEEEEEec----CCeeEEEEEeCCCCc-eeeeccc----ccceeeEeecccCCcEEEEEEecCCCCceEEEEE
Q 004766 355 ATAVNLNQMIVSYLS----DVKYVLQIRDLKNGS-LLHQLPI----EIGSVNAISARREDSVVFISFTSFLIPGIVYQCN 425 (732)
Q Consensus 355 ~~~~~~~~l~~~~~~----~g~~~l~~~d~~~g~-~~~~l~~----~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d 425 (732)
+.+.+++.+++.... .+..+|+.+++++|. ..+.++. +.+.+..+++++|++.+++.++++..| .++.+|
T Consensus 362 ~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d 440 (719)
T 1z68_A 362 IFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP-ISTLHD 440 (719)
T ss_dssp EEEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC-EEEEEC
T ss_pred EEEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC-eEEEEE
Confidence 443454778888766 466789998886553 1244542 234455677889999999999998887 688999
Q ss_pred CCCCCCceEEEEeec-C-CCCCCCCc-eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccC-CCCcCh
Q 004766 426 LKTETPEMKIFRETI-I-PGFDRSEF-HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSFSV 501 (732)
Q Consensus 426 ~~~~~~~~~~l~~~~-~-~~~~~~~~-~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~-~~~~~~ 501 (732)
+.+++ ...++.... + ..++...+ .++.+.+++. + .+|+++++.|++....++.|+||++||+++... ...|..
T Consensus 441 ~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~ 517 (719)
T 1z68_A 441 GRTDQ-EIKILEENKELENALKNIQLPKEEIKKLEVD-E-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAV 517 (719)
T ss_dssp SSSCC-EEEEEECCHHHHHHTTSBCCCEEEEEEEEET-T-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCC
T ss_pred CCCCC-EEEEeecchhhhhhhccccCCceEEEEEecC-C-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchh
Confidence 98885 233443211 1 12333344 6688888875 5 799999999998766678999999999988753 334543
Q ss_pred hHH-HHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHh
Q 004766 502 SRT-ILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACIN 580 (732)
Q Consensus 502 ~~~-~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 580 (732)
.+. .+++++||+|+++|+||+|++|..|........+...++|+.+++++|++++.+|++||+|+|+|+||++++.++.
T Consensus 518 ~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~ 597 (719)
T 1z68_A 518 NWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALA 597 (719)
T ss_dssp CHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHT
T ss_pred hHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHH
Confidence 343 3444699999999999999999999988877777788999999999999998899999999999999999999999
Q ss_pred hCCCeeeEEEEcCCcccccccccCCCCCcccc-ccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCC
Q 004766 581 QRPDLFGCALAHVGVMDMLRYHKFTIGHAWVS-DFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADH 659 (732)
Q Consensus 581 ~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~-~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~ 659 (732)
++|++|+++|+.+|+.|+..+.. .+.. .+|.|...+..+.+...+|+.++.+. ..+|+||+||.+
T Consensus 598 ~~p~~~~~~v~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~P~li~~G~~ 663 (719)
T 1z68_A 598 SGTGLFKCGIAVAPVSSWEYYAS-----VYTERFMGLPTKDDNLEHYKNSTVMARAEYF---------RNVDYLLIHGTA 663 (719)
T ss_dssp TSSSCCSEEEEESCCCCTTTSBH-----HHHHHHHCCSSTTTTHHHHHHTCSGGGGGGG---------TTSEEEEEEETT
T ss_pred hCCCceEEEEEcCCccChHHhcc-----ccchhhcCCcccccchhhhhhCCHhHHHhcC---------CCCcEEEEEeCC
Confidence 99999999999999998764321 1211 24555322233446778888888772 234999999999
Q ss_pred CCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 660 DDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 660 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
|.+||+.++.+++++|+++ ++++++++++++||++. ... ..+....+.+||.++|+
T Consensus 664 D~~v~~~~~~~~~~~l~~~----------~~~~~~~~~~~~gH~~~-~~~-~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 664 DDNVHFQNSAQIAKALVNA----------QVDFQAMWYSDQNHGLS-GLS-TNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp CSSSCTHHHHHHHHHHHHT----------TCCCEEEEETTCCTTCC-THH-HHHHHHHHHHHHHHHHC
T ss_pred CCCcCHHHHHHHHHHHHHC----------CCceEEEEECcCCCCCC-ccc-HHHHHHHHHHHHHHhhC
Confidence 9999999999999999987 88999999999999993 332 35777889999999885
No 13
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=4.7e-47 Score=443.79 Aligned_cols=576 Identities=14% Similarity=0.119 Sum_probs=392.2
Q ss_pred eCCEEEEEEEcCCCC----eeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEE
Q 004766 89 RGNKYFYFHNTGLQP----QSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMR 164 (732)
Q Consensus 89 ~g~~~~~~~~~~~~~----~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 164 (732)
+|.+++|...+.... ...+|+.+..++..+.|..... +...+..++|||||++|||+.+ .+|+++|
T Consensus 71 Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~----~~~~~~~~~~SPdG~~la~~~~------~~i~~~~ 140 (723)
T 1xfd_A 71 DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV----SNAKLQYAGWGPKGQQLIFIFE------NNIYYCA 140 (723)
T ss_dssp TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC----CSCCCSBCCBCSSTTCEEEEET------TEEEEES
T ss_pred CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcc----ccccccccEECCCCCEEEEEEC------CeEEEEE
Confidence 677787776433221 1457777665555444332211 1112457899999999999974 2799999
Q ss_pred CCCCceeccccc---ce----------------eeeeEEEEeCCcEEEEEEecCCCCC-CC----------------C-C
Q 004766 165 IEDQIVEADALS---WF----------------KFSSIAWTHDSKGFFYSRYPAPKEG-KD----------------M-D 207 (732)
Q Consensus 165 l~~g~~~~~~~~---~~----------------~~~~~~WspDg~~l~y~~~~~~~~~-~~----------------~-~ 207 (732)
+++|+....+.. .. ....++|||||+.|+|.+.+..... .. + .
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 999875432221 10 1157999999999999986542110 00 0 0
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCC----CCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPE----HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGL 283 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~----~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 283 (732)
.|. ......|+++++.++... ..+..+. .......++|||||++|++...+.. ....|+++|++++.
T Consensus 221 ~G~---~~~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~~i~~~d~~~g~--- 291 (723)
T 1xfd_A 221 AGS---ENPSISLHVIGLNGPTHD--LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQ-NVSILTLCDATTGV--- 291 (723)
T ss_dssp TTS---CCCEEEEEEEESSSSCCC--EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTS-CEEEEEEEETTTCC---
T ss_pred CCC---CCCeeEEEEEECCCCcee--EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCC-CeEEEEEEeCCCCc---
Confidence 000 011247999999876431 1222111 1345678999999998877665432 35789999998753
Q ss_pred ccccccCCCCCcEEeeec----ccc---eEEEEEecCCeEEEE-eCCCC---CCceEEEEe-CCCCC--CceEeccCCCC
Q 004766 284 EGFKKRDGLLPFVKLIDG----FDA---QYEVIANDDTVFTFL-TNKDA---PKYKIIRVD-LKEPN--DWFEVIPEAER 349 (732)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~----~~~---~~~~~s~dg~~l~~~-s~~~~---~~~~l~~~d-~~~~~--~~~~l~~~~~~ 349 (732)
...+... +.. ....|+|||+.|++. +..++ ...+|+.+| ..++. ..+.+.... .
T Consensus 292 -----------~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-~ 359 (723)
T 1xfd_A 292 -----------CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD-W 359 (723)
T ss_dssp -----------EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS-S
T ss_pred -----------ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCC-e
Confidence 2222211 111 123699999999987 44433 245899999 44433 134454332 2
Q ss_pred CceeEEEEecC-CEEEEEEecC--CeeEEEEEeCCCCceeeeccc---ccceeeEeecccCCcEEEEEEecCCCCceEEE
Q 004766 350 DVLESATAVNL-NQMIVSYLSD--VKYVLQIRDLKNGSLLHQLPI---EIGSVNAISARREDSVVFISFTSFLIPGIVYQ 423 (732)
Q Consensus 350 ~~l~~~~~~~~-~~l~~~~~~~--g~~~l~~~d~~~g~~~~~l~~---~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~ 423 (732)
.....+.|+++ +.|++....+ +..+|+.++++++...+.|+. +.+.+..+++++|++.+++.++++..|..++.
T Consensus 360 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~ 439 (723)
T 1xfd_A 360 DVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVH 439 (723)
T ss_dssp CEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEE
T ss_pred EEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEE
Confidence 23333678875 4677777665 556788887764323345543 24456678899999999999999999987654
Q ss_pred EECCCCCCceEEEEeec-C-CCCCCCCc-eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccC-CCCc
Q 004766 424 CNLKTETPEMKIFRETI-I-PGFDRSEF-HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSF 499 (732)
Q Consensus 424 ~d~~~~~~~~~~l~~~~-~-~~~~~~~~-~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~-~~~~ 499 (732)
+..+++ +...+.... . ..++...+ ..+.+.+++.|| +|+++++.|+++...++.|+||++||+++... ...|
T Consensus 440 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~ 515 (723)
T 1xfd_A 440 -NTTDKK-KMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY--NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKF 515 (723)
T ss_dssp -ETTTCC-EEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE--EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCC
T ss_pred -ECCCCC-EEEEeccChhhhhhhhhccCCCceEEEEEcCCc--eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccc
Confidence 765553 234443211 0 01222223 567788888887 89999999998766788999999999987642 2334
Q ss_pred Ch-hHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHH
Q 004766 500 SV-SRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGAC 578 (732)
Q Consensus 500 ~~-~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~ 578 (732)
.. ....+++++||+|+++|+||+|++|..|........+...++|+.+++++|.+++.+|++||+|+|+|+||++++.+
T Consensus 516 ~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 595 (723)
T 1xfd_A 516 EVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYI 595 (723)
T ss_dssp CCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHC
T ss_pred cccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHH
Confidence 32 23456776899999999999999999998877666677889999999999999988999999999999999999999
Q ss_pred HhhC----CCeeeEEEEcCCcccccccccCCCCCcccc-ccCCCC-CHHHHHHHHhcCcccCCCCCCCCCCCCCCCC-Ce
Q 004766 579 INQR----PDLFGCALAHVGVMDMLRYHKFTIGHAWVS-DFGCSE-EEEEFYWLIKYSPLHNVRRPWEQNPDKPFQY-PS 651 (732)
Q Consensus 579 ~~~~----p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~-~~g~p~-~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~-~p 651 (732)
+.++ |++|+++|+.+|+.++..+.. .+.. .+|.|. ..+ .+...+|...+.+ +. +|
T Consensus 596 a~~~~~~~p~~~~~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------~~~~P 657 (723)
T 1xfd_A 596 LPAKGENQGQTFTCGSALSPITDFKLYAS-----AFSERYLGLHGLDNR---AYEMTKVAHRVSA----------LEEQQ 657 (723)
T ss_dssp CCCSSSTTCCCCSEEEEESCCCCTTSSBH-----HHHHHHHCCCSSCCS---STTTTCTHHHHTS----------CCSCE
T ss_pred HHhccccCCCeEEEEEEccCCcchHHhhh-----hccHhhcCCccCChh---HHHhcChhhHHhh----------cCCCC
Confidence 9999 999999999999988754321 1111 124432 111 1234566555655 66 79
Q ss_pred EEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 652 TLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 652 ~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
+||+||.+|.+||+.++.+++++|+++ +.++++++++++||++..... ..+....+.+||.++|++
T Consensus 658 ~lii~G~~D~~v~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~H~~~~~~~-~~~~~~~i~~fl~~~l~~ 723 (723)
T 1xfd_A 658 FLIIHPTADEKIHFQHTAELITQLIRG----------KANYSLQIYPDESHYFTSSSL-KQHLYRSIINFFVECFRI 723 (723)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHHHHT----------TCCCEEEEETTCCSSCCCHHH-HHHHHHHHHHHHTTTTCC
T ss_pred EEEEEeCCCCCcCHhHHHHHHHHHHHC----------CCCeEEEEECCCCcccccCcc-hHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999987 889999999999999865443 357788899999988864
No 14
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.92 E-value=1.2e-24 Score=233.89 Aligned_cols=275 Identities=13% Similarity=0.095 Sum_probs=200.0
Q ss_pred EEEEEecCCCCceEEEEECCCCC---CceEEEEeecCCCCCCCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEE
Q 004766 408 VFISFTSFLIPGIVYQCNLKTET---PEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCL 484 (732)
Q Consensus 408 l~~~~ss~~~p~~~y~~d~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~v 484 (732)
+++..+++.+|.++|.++..+.. ...+.+.. .++.....++++++++ || .+|+++++.|++. ++.|+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~-dg-~~i~~~l~~p~~~---~~~P~v 155 (386)
T 2jbw_A 85 LLMSAALCAQYAQFLWFDERRQKGQARKVELYQK----AAPLLSPPAERHELVV-DG-IPMPVYVRIPEGP---GPHPAV 155 (386)
T ss_dssp HHHHHHHHHHHHHTTCCSTHHHHHHHHHHHHHHH----HGGGSSSCEEEEEEEE-TT-EEEEEEEECCSSS---CCEEEE
T ss_pred HHHHHHHhhceeeeeccCCCCCHHHHHHHHHHHH----HHhhcCCCeEEEEEEe-CC-EEEEEEEEcCCCC---CCCCEE
Confidence 45566667778887776642110 00111110 1222335788899988 89 9999999999873 688999
Q ss_pred EEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEE
Q 004766 485 LYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLC 564 (732)
Q Consensus 485 v~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~ 564 (732)
|++||+.+.. ...|.. ...|.++||+|+++|+||+|+. ...........+|+.+++++|.+++.++++||+
T Consensus 156 l~~hG~~~~~-~~~~~~--~~~l~~~G~~v~~~d~rG~G~s------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~ 226 (386)
T 2jbw_A 156 IMLGGLESTK-EESFQM--ENLVLDRGMATATFDGPGQGEM------FEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIG 226 (386)
T ss_dssp EEECCSSCCT-TTTHHH--HHHHHHTTCEEEEECCTTSGGG------TTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred EEeCCCCccH-HHHHHH--HHHHHhCCCEEEEECCCCCCCC------CCCCCCCccHHHHHHHHHHHHHhCCCcCcccEE
Confidence 9998876543 223332 3445559999999999998764 112233445567899999999999999999999
Q ss_pred EEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCC---CccccccCCCCCHHHH-HHHHhcCcccCCCCCCC
Q 004766 565 IEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG---HAWVSDFGCSEEEEEF-YWLIKYSPLHNVRRPWE 640 (732)
Q Consensus 565 i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~---~~~~~~~g~p~~~~~~-~~~~~~sp~~~~~~~~~ 640 (732)
|+|+|+||++++.++.+ |++|+++|+. |+.++......... ..+...+|.+...+.+ ..+..++|..++.+
T Consensus 227 l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--- 301 (386)
T 2jbw_A 227 VLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQ--- 301 (386)
T ss_dssp EEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGG---
T ss_pred EEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHhccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcc---
Confidence 99999999999999999 9999999999 99988655431100 0111235655444555 67788999888776
Q ss_pred CCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHH-HHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHH
Q 004766 641 QNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATM-QYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRY 719 (732)
Q Consensus 641 ~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~ 719 (732)
+.+|+||+||.+|. ||+.++.+++++| +. ++++++++++||++.. . ..+....+.
T Consensus 302 -------i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~-------------~~~~~~~~~~gH~~~~--~-~~~~~~~i~ 357 (386)
T 2jbw_A 302 -------IACPTYILHGVHDE-VPLSFVDTVLELVPAE-------------HLNLVVEKDGDHCCHN--L-GIRPRLEMA 357 (386)
T ss_dssp -------CCSCEEEEEETTSS-SCTHHHHHHHHHSCGG-------------GEEEEEETTCCGGGGG--G-TTHHHHHHH
T ss_pred -------cCCCEEEEECCCCC-CCHHHHHHHHHHhcCC-------------CcEEEEeCCCCcCCcc--c-hHHHHHHHH
Confidence 78999999999999 9999999999988 42 4799999999997532 2 246677899
Q ss_pred HHHHHHhCCC
Q 004766 720 GFMAKMLGAS 729 (732)
Q Consensus 720 ~fl~~~l~~~ 729 (732)
+||.++|+..
T Consensus 358 ~fl~~~l~~~ 367 (386)
T 2jbw_A 358 DWLYDVLVAG 367 (386)
T ss_dssp HHHHHHHTSS
T ss_pred HHHHHhcCCc
Confidence 9999999864
No 15
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.91 E-value=1.2e-23 Score=221.49 Aligned_cols=247 Identities=19% Similarity=0.205 Sum_probs=179.0
Q ss_pred CCCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCC
Q 004766 446 RSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEY 525 (732)
Q Consensus 446 ~~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~ 525 (732)
...+.++.+.+++.|| .+|+++++.|++. .++.|+||++||+.+... +......++. +||+|+++|+||.|++
T Consensus 63 ~~~~~~~~~~~~~~dg-~~i~~~~~~P~~~--~~~~p~vv~~HG~g~~~~---~~~~~~~l~~-~G~~v~~~d~rG~g~s 135 (337)
T 1vlq_A 63 LKTVEAYDVTFSGYRG-QRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRG---FPHDWLFWPS-MGYICFVMDTRGQGSG 135 (337)
T ss_dssp CSSEEEEEEEEECGGG-CEEEEEEEEECCS--CSSEEEEEECCCTTCCCC---CGGGGCHHHH-TTCEEEEECCTTCCCS
T ss_pred CCCeEEEEEEEEcCCC-CEEEEEEEecCCC--CCCccEEEEEcCCCCCCC---Cchhhcchhh-CCCEEEEecCCCCCCc
Confidence 3456788999999999 9999999999863 467899999999876532 2222334444 9999999999999865
Q ss_pred chh-----------------HHhcccccCC----ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCC
Q 004766 526 GEE-----------------WHKGGALAKK----QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD 584 (732)
Q Consensus 526 g~~-----------------~~~~~~~~~~----~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~ 584 (732)
+.. |...+..... ...++|+.+++++|.++..+|++||+++|+|+||++++.++.++|
T Consensus 136 ~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p- 214 (337)
T 1vlq_A 136 WLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK- 214 (337)
T ss_dssp SSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-
T ss_pred ccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-
Confidence 432 0011111110 156899999999999998889999999999999999999999988
Q ss_pred eeeEEEEcCCcccccc-cccCCCCCccc--ccc--CCC-CCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeC
Q 004766 585 LFGCALAHVGVMDMLR-YHKFTIGHAWV--SDF--GCS-EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD 658 (732)
Q Consensus 585 ~f~a~v~~~p~~d~~~-~~~~~~~~~~~--~~~--g~p-~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~ 658 (732)
.++++|+.+|+++... .........|. .+| ..+ .....+..+..++|...+.+ +.+|+|+++|.
T Consensus 215 ~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------i~~P~lii~G~ 284 (337)
T 1vlq_A 215 KAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAAR----------AKIPALFSVGL 284 (337)
T ss_dssp SCCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTT----------CCSCEEEEEET
T ss_pred CccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHH----------cCCCEEEEeeC
Confidence 5889999998654322 11111111110 111 123 23344555667788877776 67999999999
Q ss_pred CCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 659 HDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 659 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
+|.+||+.++.+++++|+ .++++++++++||++.. .+....+++||.++|+.
T Consensus 285 ~D~~~p~~~~~~~~~~l~-------------~~~~~~~~~~~gH~~~~-----~~~~~~~~~fl~~~l~~ 336 (337)
T 1vlq_A 285 MDNICPPSTVFAAYNYYA-------------GPKEIRIYPYNNHEGGG-----SFQAVEQVKFLKKLFEK 336 (337)
T ss_dssp TCSSSCHHHHHHHHHHCC-------------SSEEEEEETTCCTTTTH-----HHHHHHHHHHHHHHHC-
T ss_pred CCCCCCchhHHHHHHhcC-------------CCcEEEEcCCCCCCCcc-----hhhHHHHHHHHHHHHhc
Confidence 999999999999888765 25899999999999742 23457788999998863
No 16
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.91 E-value=3.3e-23 Score=211.52 Aligned_cols=237 Identities=13% Similarity=0.093 Sum_probs=172.0
Q ss_pred EEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcc
Q 004766 454 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGG 533 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~ 533 (732)
..+.+.+| .++.+++..|.....+++.|+||++||+............+...|+++||.|+++|+||.|+...
T Consensus 17 ~~~~~~~g-~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~------ 89 (276)
T 3hxk_A 17 STFSLNDT-AWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTN------ 89 (276)
T ss_dssp EECCCBTT-BEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCC------
T ss_pred ccccCCCC-eEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCC------
Confidence 34566788 88888766554432347889999999975333233333345566666999999999999876320
Q ss_pred cccCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhh-CCCeeeEEEEcCCcccccccccCCCCCc
Q 004766 534 ALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQ-RPDLFGCALAHVGVMDMLRYHKFTIGHA 609 (732)
Q Consensus 534 ~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~-~p~~f~a~v~~~p~~d~~~~~~~~~~~~ 609 (732)
.......++|+.++++++.+.. .+|+++|+++|+|+||++++.++.+ .++.++++|+.+|+.++...... ...
T Consensus 90 -~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~--~~~ 166 (276)
T 3hxk_A 90 -YNFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPS--DLS 166 (276)
T ss_dssp -SCTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSS--SSS
T ss_pred -CCcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCc--chh
Confidence 0111246789999999998864 2688999999999999999999988 78999999999999886544221 111
Q ss_pred cccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCC
Q 004766 610 WVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT 689 (732)
Q Consensus 610 ~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 689 (732)
+ ..+- +... ..++|...+.+ +.+|+|++||.+|..||+.++.+++++|++. +
T Consensus 167 ~-~~~~-~~~~------~~~~~~~~~~~----------~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~----------~ 218 (276)
T 3hxk_A 167 H-FNFE-IENI------SEYNISEKVTS----------STPPTFIWHTADDEGVPIYNSLKYCDRLSKH----------Q 218 (276)
T ss_dssp S-SCCC-CSCC------GGGBTTTTCCT----------TSCCEEEEEETTCSSSCTHHHHHHHHHHHTT----------T
T ss_pred h-hhcC-chhh------hhCChhhcccc----------CCCCEEEEecCCCceeChHHHHHHHHHHHHc----------C
Confidence 1 1111 1111 34567766665 7899999999999999999999999999987 8
Q ss_pred CCEEEEEeCCCCCCCCCchH-----------HHHHHHHHHHHHHHHHhCC
Q 004766 690 NPIIGRIERKAGHGVGLPTQ-----------KMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 690 ~~~~~~~~~~~gH~~~~~~~-----------~~~~~~~~~~~fl~~~l~~ 728 (732)
.++++++++++||++..... ...+....+.+||.++...
T Consensus 219 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~ 268 (276)
T 3hxk_A 219 VPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKN 268 (276)
T ss_dssp CCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHhCccc
Confidence 89999999999998763211 3356777888999988744
No 17
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.91 E-value=1.2e-22 Score=212.85 Aligned_cols=240 Identities=17% Similarity=0.110 Sum_probs=171.7
Q ss_pred CceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHh-cCcEEEEEcccCCCCCc
Q 004766 448 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH-LGAVFCIANIRGGGEYG 526 (732)
Q Consensus 448 ~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~rG~g~~g 526 (732)
.+..+.+++++.|| +|++.+++|++. ..|+||++|||............+...|+. +||+|+.+|+|++++.
T Consensus 60 ~~~~~~~~~~~~~g--~i~~~~~~p~~~----~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~- 132 (326)
T 3ga7_A 60 SMTTRTCAVPTPYG--DVTTRLYSPQPT----SQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQA- 132 (326)
T ss_dssp CCEEEEEEECCTTS--CEEEEEEESSSS----CSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTS-
T ss_pred CcceEEEEeecCCC--CeEEEEEeCCCC----CCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCC-
Confidence 45568899999888 799999999863 349999999987433333333344555664 6999999999998764
Q ss_pred hhHHhcccccCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhhCCCe------eeEEEEcCCccc
Q 004766 527 EEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRPDL------FGCALAHVGVMD 597 (732)
Q Consensus 527 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p~~------f~a~v~~~p~~d 597 (732)
.....++|+.++++|+.++. .+|++||+|+|+|+||++++.++.++|+. ++++|+.+|+.+
T Consensus 133 ----------~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~ 202 (326)
T 3ga7_A 133 ----------RYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYG 202 (326)
T ss_dssp ----------CTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCS
T ss_pred ----------CCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccc
Confidence 23456799999999999873 46899999999999999999999887764 899999999887
Q ss_pred ccccccCCCCCccccccCC---CCCHHHHHH-HHh--------cCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCc
Q 004766 598 MLRYHKFTIGHAWVSDFGC---SEEEEEFYW-LIK--------YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVP 665 (732)
Q Consensus 598 ~~~~~~~~~~~~~~~~~g~---p~~~~~~~~-~~~--------~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~ 665 (732)
....... ..++. ....+.... +.. .+|+...... ......||+||+||+.|..|
T Consensus 203 ~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~P~li~~G~~D~~~-- 268 (326)
T 3ga7_A 203 LQDSVSR-------RLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNN-----DLTRDVPPCFIASAEFDPLI-- 268 (326)
T ss_dssp CSCCHHH-------HHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGS-----CCSSCCCCEEEEEETTCTTH--
T ss_pred cCCChhH-------hhhcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcc-----hhhcCCCCEEEEecCcCcCH--
Confidence 6432110 01110 011111111 111 1333221100 00126789999999999998
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc---hHHHHHHHHHHHHHHHHHhCC
Q 004766 666 LHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 666 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~ 728 (732)
.++.+++++|+++ |+++++++|++++|++... ..+..+..+.+.+||.++|+.
T Consensus 269 ~~~~~~~~~l~~~----------g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 269 DDSRLLHQTLQAH----------QQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp HHHHHHHHHHHHT----------TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHC----------CCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 4899999999998 9999999999999998432 123357788899999998864
No 18
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.90 E-value=1.3e-22 Score=207.13 Aligned_cols=236 Identities=11% Similarity=0.048 Sum_probs=165.4
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCC---CCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCc
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKN---IKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 526 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~---~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g 526 (732)
..+.+.+. .+| ..+++.++.|+. +...++.|+||++|||............+...|+++||.|+++|+||+|+.+
T Consensus 3 ~~~~~~~~-~~~-~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~ 80 (277)
T 3bxp_A 3 QVEQRTLN-TAA-HPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQ 80 (277)
T ss_dssp EEEEEEEC-STT-CCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTC
T ss_pred ceEEEEec-cCC-CcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCC
Confidence 45566664 477 799999999983 2235788999999997433222222223445565699999999999977322
Q ss_pred hhHHhcccccCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhhC--------------CCeeeEE
Q 004766 527 EEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQR--------------PDLFGCA 589 (732)
Q Consensus 527 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~--------------p~~f~a~ 589 (732)
. .....++|+.+++++|.+.. -++++||+++|+|+||++++.++.++ |..++++
T Consensus 81 ~---------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 151 (277)
T 3bxp_A 81 S---------VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAI 151 (277)
T ss_dssp C---------CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEE
T ss_pred c---------cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEE
Confidence 2 22356789999999998762 25788999999999999999999885 7789999
Q ss_pred EEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHH
Q 004766 590 LAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSL 669 (732)
Q Consensus 590 v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~ 669 (732)
|+.+|+.++..... ....+...+- ..+...+|...+.+ +.+|+||+||.+|..||+.++.
T Consensus 152 v~~~p~~~~~~~~~--~~~~~~~~~~--------~~~~~~~~~~~~~~----------~~~P~lii~G~~D~~vp~~~~~ 211 (277)
T 3bxp_A 152 ILGYPVIDLTAGFP--TTSAARNQIT--------TDARLWAAQRLVTP----------ASKPAFVWQTATDESVPPINSL 211 (277)
T ss_dssp EEESCCCBTTSSSS--SSHHHHHHHC--------SCGGGSBGGGGCCT----------TSCCEEEEECTTCCCSCTHHHH
T ss_pred EEeCCcccCCCCCC--Cccccchhcc--------chhhhcCHhhcccc----------CCCCEEEEeeCCCCccChHHHH
Confidence 99999887542211 0000000000 01234567666655 6789999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCch-------------HHHHHHHHHHHHHHHHHh
Q 004766 670 KLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT-------------QKMIDEAADRYGFMAKML 726 (732)
Q Consensus 670 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-------------~~~~~~~~~~~~fl~~~l 726 (732)
+++++|++. +.++++++++++||++.... ....+....+.+||.++.
T Consensus 212 ~~~~~l~~~----------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 212 KYVQAMLQH----------QVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHHHHHHHT----------TCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHC----------CCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 999999987 88999999999999765322 223567788899998763
No 19
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.90 E-value=8.3e-23 Score=215.26 Aligned_cols=285 Identities=12% Similarity=0.041 Sum_probs=177.1
Q ss_pred cCCcEEEEEEecCCCCceEEEEECCCCCCceEE-EEeecCC-CCCC---CCceEEEEEEEccCCCeeEEEEEEEcCCC-C
Q 004766 403 REDSVVFISFTSFLIPGIVYQCNLKTETPEMKI-FRETIIP-GFDR---SEFHVHQVFVPSKDGSTKIPMFIVSKKNI-K 476 (732)
Q Consensus 403 ~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~-l~~~~~~-~~~~---~~~~~~~~~~~s~dG~~~i~~~~~~p~~~-~ 476 (732)
++.+++++.++++..|...++++.. |+ ... +..+..+ ..++ ..+..+.+.+.+ | ..+++.++.|++. .
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~-g~--~~r~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~-~~~~~~~~~P~~~~~ 78 (338)
T 2o7r_A 5 HLETTGSSDPNTNLLKYLPIVLNPD-RT--ITRPIQIPSTAASPDPTSSSPVLTKDLALNP--L-HNTFVRLFLPRHALY 78 (338)
T ss_dssp -------------CTTTCSCEECTT-SC--EECCSCCCBCCCCCCTTSSCSEEEEEEEEET--T-TTEEEEEEEEGGGGG
T ss_pred CCCCceeeccCcccccccceEECCC-Ce--EEecCCCCCCCCCCCcccCCCEEEEEEEecC--C-CCeEEEEEeCCCCCc
Confidence 4556788888888888777777653 42 222 2222222 2333 356778888875 5 6788888999864 3
Q ss_pred CCCCccEEEEEcCCCCccCCCC---cChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHH
Q 004766 477 LDGSHPCLLYGYGGFNISVTPS---FSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLI 553 (732)
Q Consensus 477 ~~~~~P~vv~~hG~~~~~~~~~---~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~ 553 (732)
.+++.|+||++|||........ |......+..++||+|+++|+||+++. .....++|+.++++||.
T Consensus 79 ~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~-----------~~~~~~~d~~~~~~~l~ 147 (338)
T 2o7r_A 79 NSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEH-----------RLPAAYDDAMEALQWIK 147 (338)
T ss_dssp SSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTT-----------CTTHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCC-----------CCchHHHHHHHHHHHHH
Confidence 4578999999999864433322 443334444258999999999998763 23457899999999999
Q ss_pred HcC------CCCCCcEEEEecChhHHHHHHHHhhCCC--------eeeEEEEcCCcccccccccCCCCCccccccCCC-C
Q 004766 554 SAG------YTQSRKLCIEGGSNGGLLVGACINQRPD--------LFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCS-E 618 (732)
Q Consensus 554 ~~~------~~d~~~i~i~G~S~GG~l~~~~~~~~p~--------~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p-~ 618 (732)
++. .+|++|++|+|+|+||++++.++.++|+ +++++|+.+|+.+....... .......+ .
T Consensus 148 ~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~-----~~~~~~~~~~ 222 (338)
T 2o7r_A 148 DSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGS-----ELRLANDSRL 222 (338)
T ss_dssp TCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHH-----HHHTTTCSSS
T ss_pred hCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChh-----hhccCCCccc
Confidence 863 3677999999999999999999999888 89999999998876432110 00000000 0
Q ss_pred CHHHHHHH-Hhc------------CcccCC------CCCCCCCCCCCCCCC-eEEEEeeCCCCCCCchHHHHHHHHHHHh
Q 004766 619 EEEEFYWL-IKY------------SPLHNV------RRPWEQNPDKPFQYP-STLLLTADHDDRVVPLHSLKLLATMQYV 678 (732)
Q Consensus 619 ~~~~~~~~-~~~------------sp~~~~------~~~~~~~~~~~~~~~-p~Li~~g~~D~~v~~~~~~~~~~~l~~~ 678 (732)
.....+.+ ..+ +|+... +.. ...| |+||++|++|..|+ ++.+++++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~P~Lvi~G~~D~~~~--~~~~~~~~l~~~ 292 (338)
T 2o7r_A 223 PTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKI--------RSLGWRVMVVGCHGDPMID--RQMELAERLEKK 292 (338)
T ss_dssp CHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHH--------HHHTCEEEEEEETTSTTHH--HHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhh--------cCCCCCEEEEECCCCcchH--HHHHHHHHHHHC
Confidence 00111111 111 111110 000 0124 99999999999987 678899999987
Q ss_pred hcCCCCCCCCCCCEEEEEeCCCCCCCCC-chHHHHHHHHHHHHHHHHHhCCC
Q 004766 679 LCTSLENSPQTNPIIGRIERKAGHGVGL-PTQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
+.++++++++++||++.. ......+..+.+.+||.++++..
T Consensus 293 ----------~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~~~ 334 (338)
T 2o7r_A 293 ----------GVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCTTK 334 (338)
T ss_dssp ----------TCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC------
T ss_pred ----------CCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhcccc
Confidence 889999999999998753 22233567788999999887643
No 20
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.90 E-value=9.4e-23 Score=205.96 Aligned_cols=216 Identities=16% Similarity=0.099 Sum_probs=141.8
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhH
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 529 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~ 529 (732)
..|+.+....|| .+||++++.|++. ++.|+||++||+.+....+.+.. ..++|+++||+|+.+|+||+|+.+...
T Consensus 29 ~~e~~~~~~~dG-~~i~g~l~~P~~~---~~~p~Vl~~HG~g~~~~~~~~~~-~a~~la~~Gy~Vl~~D~rG~G~s~~~~ 103 (259)
T 4ao6_A 29 VQERGFSLEVDG-RTVPGVYWSPAEG---SSDRLVLLGHGGTTHKKVEYIEQ-VAKLLVGRGISAMAIDGPGHGERASVQ 103 (259)
T ss_dssp EEEEEEEEEETT-EEEEEEEEEESSS---CCSEEEEEEC--------CHHHH-HHHHHHHTTEEEEEECCCC--------
T ss_pred ceEEEEEEeeCC-eEEEEEEEeCCCC---CCCCEEEEeCCCcccccchHHHH-HHHHHHHCCCeEEeeccCCCCCCCCcc
Confidence 445544456799 9999999999863 57899999999987654444443 456677799999999999998765543
Q ss_pred HhcccccC---------------CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 530 HKGGALAK---------------KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 530 ~~~~~~~~---------------~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
........ ....+.|..+++++|... +|++||+++|+|+||+++..++...|+ ++|+|+..+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~ 180 (259)
T 4ao6_A 104 AGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLM 180 (259)
T ss_dssp -----CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESC
T ss_pred cccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEecc
Confidence 22111110 112356788888888754 789999999999999999999999885 555554433
Q ss_pred cccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHH
Q 004766 595 VMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLAT 674 (732)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~ 674 (732)
..+.. .. .++...+.+ +..|+||+||.+|.+||+.++.+++++
T Consensus 181 ~~~~~-------------------~~--------~~~~~~a~~----------i~~P~Li~hG~~D~~vp~~~~~~l~~a 223 (259)
T 4ao6_A 181 GVEGV-------------------NG--------EDLVRLAPQ----------VTCPVRYLLQWDDELVSLQSGLELFGK 223 (259)
T ss_dssp CTTST-------------------TH--------HHHHHHGGG----------CCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ccccc-------------------cc--------cchhhhhcc----------CCCCEEEEecCCCCCCCHHHHHHHHHH
Confidence 22110 00 012233333 788999999999999999999999988
Q ss_pred HHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 675 MQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 675 l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
|. ..+..++++++ +|... +. .+..+.+++||.++|.
T Consensus 224 l~------------~~~k~l~~~~G-~H~~~-p~---~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 224 LG------------TKQKTLHVNPG-KHSAV-PT---WEMFAGTVDYLDQRLK 259 (259)
T ss_dssp CC------------CSSEEEEEESS-CTTCC-CH---HHHTHHHHHHHHHHCC
T ss_pred hC------------CCCeEEEEeCC-CCCCc-CH---HHHHHHHHHHHHHhcC
Confidence 75 44568889987 56432 22 3456678999999984
No 21
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.90 E-value=1.5e-22 Score=201.73 Aligned_cols=225 Identities=15% Similarity=0.137 Sum_probs=165.8
Q ss_pred CceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCch
Q 004766 448 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE 527 (732)
Q Consensus 448 ~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~ 527 (732)
.+..+.+.+++ +| .+++++++.|++. .++.|+||++||..+.. ..+ ..+...|+++||.|+++|+||.|+...
T Consensus 3 ~~~~~~~~~~~-~~-~~~~~~~~~p~~~--~~~~p~vv~~HG~~g~~--~~~-~~~~~~l~~~G~~v~~~d~~g~g~~~~ 75 (241)
T 3f67_A 3 AIIAGETSIPS-QG-ENMPAYHARPKNA--DGPLPIVIVVQEIFGVH--EHI-RDLCRRLAQEGYLAIAPELYFRQGDPN 75 (241)
T ss_dssp CEEEEEEEEEE-TT-EEEEEEEEEETTC--CSCEEEEEEECCTTCSC--HHH-HHHHHHHHHTTCEEEEECTTTTTCCGG
T ss_pred cceeeeEEEec-CC-cceEEEEecCCCC--CCCCCEEEEEcCcCccC--HHH-HHHHHHHHHCCcEEEEecccccCCCCC
Confidence 45677888888 88 9999999999863 36789999999976653 222 234555666999999999999876544
Q ss_pred hHHhcc-------cccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccc
Q 004766 528 EWHKGG-------ALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR 600 (732)
Q Consensus 528 ~~~~~~-------~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~ 600 (732)
.+.... .........+|+.+++++|.+++ +|+++|+++|+|+||.+++.++.++|+ ++++|+..|....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~-- 151 (241)
T 3f67_A 76 EYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVG-- 151 (241)
T ss_dssp GCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSC--
T ss_pred chhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccC--
Confidence 322111 11112345789999999999887 888999999999999999999999998 6666665553211
Q ss_pred cccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhc
Q 004766 601 YHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLC 680 (732)
Q Consensus 601 ~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~ 680 (732)
.. ..+ ...+|...+.+ +.+|+|+++|.+|..||+.++.+++++|++.
T Consensus 152 -----~~----~~~------------~~~~~~~~~~~----------~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~-- 198 (241)
T 3f67_A 152 -----EK----SLN------------SPKHPVDIAVD----------LNAPVLGLYGAKDASIPQDTVETMRQALRAA-- 198 (241)
T ss_dssp -----CC----CSS------------SCCCHHHHGGG----------CCSCEEEEEETTCTTSCHHHHHHHHHHHHHT--
T ss_pred -----CC----ccC------------CccCHHHhhhh----------cCCCEEEEEecCCCCCCHHHHHHHHHHHHHc--
Confidence 00 000 11234444444 6789999999999999999999999999987
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCCCCc------hHHHHHHHHHHHHHHHH
Q 004766 681 TSLENSPQTNPIIGRIERKAGHGVGLP------TQKMIDEAADRYGFMAK 724 (732)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~gH~~~~~------~~~~~~~~~~~~~fl~~ 724 (732)
+.++++++++++||++... .....+.+..+.+||.+
T Consensus 199 --------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 199 --------NATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp --------TCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred --------CCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 8899999999999998632 22235667778888865
No 22
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.89 E-value=3.1e-22 Score=214.34 Aligned_cols=221 Identities=15% Similarity=0.131 Sum_probs=172.7
Q ss_pred eEEEEEEEcc-CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCC--------cCh-hHHHHHHhcCcEEEEEcc
Q 004766 450 HVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPS--------FSV-SRTILMRHLGAVFCIANI 519 (732)
Q Consensus 450 ~~~~~~~~s~-dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~--------~~~-~~~~~l~~~G~~v~~~~~ 519 (732)
..+.+.+.+. || .++++.++.|+++.+.+++|+||++||+.+....+. +.. ....+....|+.++.+++
T Consensus 143 ~~~~~~~~~~~dg-~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~ 221 (380)
T 3doh_A 143 DFLAFTFKDPETG-VEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQC 221 (380)
T ss_dssp GEEEEEEECTTTC-CEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECC
T ss_pred cccceeeccCCCC-cEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecC
Confidence 4567788888 99 999999999998666788999999999876533221 100 012233457899999999
Q ss_pred cCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccc
Q 004766 520 RGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDML 599 (732)
Q Consensus 520 rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~ 599 (732)
||++++|..|...+........+.|+.+++++++++..+|++||+|+|+|+||++++.++.++|++|+++|+.+|..+.
T Consensus 222 ~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~- 300 (380)
T 3doh_A 222 PPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV- 300 (380)
T ss_dssp CTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG-
T ss_pred CCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh-
Confidence 9999999999876555556778999999999999887789999999999999999999999999999999999887411
Q ss_pred ccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhh
Q 004766 600 RYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVL 679 (732)
Q Consensus 600 ~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~ 679 (732)
..+... ..+|+|++||.+|..||+.++.+++++|+++
T Consensus 301 ---------------------------------~~~~~~---------~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~- 337 (380)
T 3doh_A 301 ---------------------------------SKVERI---------KDIPIWVFHAEDDPVVPVENSRVLVKKLAEI- 337 (380)
T ss_dssp ---------------------------------GGGGGG---------TTSCEEEEEETTCSSSCTHHHHHHHHHHHHT-
T ss_pred ---------------------------------hhhhhc---------cCCCEEEEecCCCCccCHHHHHHHHHHHHHC-
Confidence 011111 2379999999999999999999999999988
Q ss_pred cCCCCCCCCCCCEEEEEeCCC---CCCCCCchHHHHHHHH--HHHHHHHHH
Q 004766 680 CTSLENSPQTNPIIGRIERKA---GHGVGLPTQKMIDEAA--DRYGFMAKM 725 (732)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~---gH~~~~~~~~~~~~~~--~~~~fl~~~ 725 (732)
|.++++++++++ +|++..... +...+. .+++||.++
T Consensus 338 ---------g~~~~~~~~~~~~h~~h~~~~H~~-~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 338 ---------GGKVRYTEYEKGFMEKHGWDPHGS-WIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp ---------TCCEEEEEECTTHHHHTTCCTTCT-HHHHHTCHHHHHHHHTC
T ss_pred ---------CCceEEEEecCCcccCCCCCCchh-HHHhcCCHHHHHHHHhh
Confidence 889999999999 443322111 223344 788898764
No 23
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.89 E-value=2e-22 Score=209.90 Aligned_cols=243 Identities=15% Similarity=0.122 Sum_probs=172.1
Q ss_pred CCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCc-cCCCCcChhHHHHHHhcCcEEEEEcccCCCCC
Q 004766 447 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNI-SVTPSFSVSRTILMRHLGAVFCIANIRGGGEY 525 (732)
Q Consensus 447 ~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~ 525 (732)
..+..+.+.+++.|| .+|+++++.|++ .++.|+||++||+.+. .. .+. ....++ ++||+|+++|+||.|+.
T Consensus 52 ~~~~~~~~~~~~~~g-~~i~~~~~~P~~---~~~~p~vv~~HG~~~~~~~--~~~-~~~~l~-~~g~~v~~~d~rg~g~s 123 (318)
T 1l7a_A 52 DGVKVYRLTYKSFGN-ARITGWYAVPDK---EGPHPAIVKYHGYNASYDG--EIH-EMVNWA-LHGYATFGMLVRGQQRS 123 (318)
T ss_dssp SSEEEEEEEEEEGGG-EEEEEEEEEESS---CSCEEEEEEECCTTCCSGG--GHH-HHHHHH-HTTCEEEEECCTTTSSS
T ss_pred CCeEEEEEEEEccCC-CEEEEEEEeeCC---CCCccEEEEEcCCCCCCCC--Ccc-cccchh-hCCcEEEEecCCCCCCC
Confidence 345778899999899 999999999986 4678999999998765 32 222 233444 48999999999999987
Q ss_pred chhHHhcccc----------cC----CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEE
Q 004766 526 GEEWHKGGAL----------AK----KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALA 591 (732)
Q Consensus 526 g~~~~~~~~~----------~~----~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~ 591 (732)
+..+...+.. .. -...++|+.+++++|.++..+|+++|+++|+|+||.+++.++.++|+ ++++|+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~ 202 (318)
T 1l7a_A 124 EDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVA 202 (318)
T ss_dssp CCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEE
T ss_pred CCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEe
Confidence 6543211100 00 02458999999999999988899999999999999999999999887 666777
Q ss_pred cCCccccc-ccccCCCCCcc------ccccCCC-CCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCC
Q 004766 592 HVGVMDML-RYHKFTIGHAW------VSDFGCS-EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRV 663 (732)
Q Consensus 592 ~~p~~d~~-~~~~~~~~~~~------~~~~g~p-~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v 663 (732)
.+|+++.. ..........| ...++.+ .....+..+..++|...+.+ +.+|+|+++|.+|..|
T Consensus 203 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~P~li~~g~~D~~~ 272 (318)
T 1l7a_A 203 DYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADR----------VKVPVLMSIGLIDKVT 272 (318)
T ss_dssp ESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGG----------CCSCEEEEEETTCSSS
T ss_pred cCCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhh----------CCCCEEEEeccCCCCC
Confidence 88865422 11111111111 0111112 11223333444566665555 6799999999999999
Q ss_pred CchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 664 VPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 664 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
|+.++.++++++. .++++++++++||+.. .+....+.+||.++|+
T Consensus 273 ~~~~~~~~~~~l~-------------~~~~~~~~~~~~H~~~------~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 273 PPSTVFAAYNHLE-------------TKKELKVYRYFGHEYI------PAFQTEKLAFFKQILK 317 (318)
T ss_dssp CHHHHHHHHHHCC-------------SSEEEEEETTCCSSCC------HHHHHHHHHHHHHHHC
T ss_pred CcccHHHHHhhcC-------------CCeeEEEccCCCCCCc------chhHHHHHHHHHHHhC
Confidence 9999988887764 2489999999999932 2345678899999885
No 24
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.88 E-value=3.7e-21 Score=204.21 Aligned_cols=245 Identities=14% Similarity=0.140 Sum_probs=164.2
Q ss_pred CCceEEEEEEEccCCCeeEEEEEEE-cCCC--------------------CCCCCccEEEEEcCCCCccCCCC---cChh
Q 004766 447 SEFHVHQVFVPSKDGSTKIPMFIVS-KKNI--------------------KLDGSHPCLLYGYGGFNISVTPS---FSVS 502 (732)
Q Consensus 447 ~~~~~~~~~~~s~dG~~~i~~~~~~-p~~~--------------------~~~~~~P~vv~~hG~~~~~~~~~---~~~~ 502 (732)
..+..+.+.+.+.+| +.+.++. |+.. ...++.|+||++|||........ |...
T Consensus 60 ~~v~~~dv~~~~~~g---l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~ 136 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG---LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSL 136 (365)
T ss_dssp TTEEEEEEEEETTTT---EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHH
T ss_pred CCCceeeEEecCCCC---ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHH
Confidence 345778888988888 4555555 7642 23467899999999854332222 3333
Q ss_pred HHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcC----CCCCC-cEEEEecChhHHHHHH
Q 004766 503 RTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG----YTQSR-KLCIEGGSNGGLLVGA 577 (732)
Q Consensus 503 ~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-~i~i~G~S~GG~l~~~ 577 (732)
...+..+.||+|+.+|+|++++.. ....++|+.++++||.++. .+|++ ||+|+|+|+||++++.
T Consensus 137 ~~~la~~~g~~Vv~~dyR~~p~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~ 205 (365)
T 3ebl_A 137 CRRFVKLSKGVVVSVNYRRAPEHR-----------YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHH 205 (365)
T ss_dssp HHHHHHHHTSEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHH
T ss_pred HHHHHHHCCCEEEEeeCCCCCCCC-----------CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHH
Confidence 334444349999999999977532 2356899999999999765 57999 9999999999999999
Q ss_pred HHhhCCC---eeeEEEEcCCcccccccccCCCCCcccccc-CCC-CCHHHHHHH-H------------hcCccc-CCCCC
Q 004766 578 CINQRPD---LFGCALAHVGVMDMLRYHKFTIGHAWVSDF-GCS-EEEEEFYWL-I------------KYSPLH-NVRRP 638 (732)
Q Consensus 578 ~~~~~p~---~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~-g~p-~~~~~~~~~-~------------~~sp~~-~~~~~ 638 (732)
++.+.++ .++++|+.+|+++........ ..+ ..+ ......+.+ . ..+|+. .....
T Consensus 206 ~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l 279 (365)
T 3ebl_A 206 VAVRAADEGVKVCGNILLNAMFGGTERTESE------RRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRL 279 (365)
T ss_dssp HHHHHHHTTCCCCEEEEESCCCCCSSCCHHH------HHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCC
T ss_pred HHHHHHhcCCceeeEEEEccccCCCcCChhh------hhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhh
Confidence 9987665 799999999998864322100 000 000 001111111 1 112332 11111
Q ss_pred CCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCC--chHHHHHHHH
Q 004766 639 WEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGL--PTQKMIDEAA 716 (732)
Q Consensus 639 ~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~ 716 (732)
.....||+||+||++|..+ .++.+++++|+++ |++++++++++++|++.. ...+..+.+.
T Consensus 280 ------~~~~~pP~Li~~G~~D~l~--~~~~~~~~~L~~~----------g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~ 341 (365)
T 3ebl_A 280 ------GGLPFAKSLIIVSGLDLTC--DRQLAYADALRED----------GHHVKVVQCENATVGFYLLPNTVHYHEVME 341 (365)
T ss_dssp ------TTSCCCCEEEEEETTSTTH--HHHHHHHHHHHHT----------TCCEEEEEETTCCTTGGGSSCSHHHHHHHH
T ss_pred ------ccCCCCCEEEEEcCcccch--hHHHHHHHHHHHC----------CCCEEEEEECCCcEEEeccCCCHHHHHHHH
Confidence 0002389999999999654 4678999999988 899999999999999751 1233467888
Q ss_pred HHHHHHHHHhCCC
Q 004766 717 DRYGFMAKMLGAS 729 (732)
Q Consensus 717 ~~~~fl~~~l~~~ 729 (732)
.+.+||.++++.+
T Consensus 342 ~i~~Fl~~~~~~~ 354 (365)
T 3ebl_A 342 EISDFLNANLYYG 354 (365)
T ss_dssp HHHHHHHHHCC--
T ss_pred HHHHHHHHhhhcc
Confidence 9999999998754
No 25
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.88 E-value=3.3e-22 Score=204.98 Aligned_cols=234 Identities=12% Similarity=0.013 Sum_probs=167.2
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCC---CCCCCccEEEEEcCCCCccCC-CCcChhHHHHHHhcCcEEEEEcccCCCCC
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNI---KLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGGEY 525 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~---~~~~~~P~vv~~hG~~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~g~~ 525 (732)
..+.+.+.+.+| ..+++.++ |+.. ..+++.|+||++||+...... ..|. .+...|+++||.|+++|+||.++.
T Consensus 18 ~~~~v~~~~~~g-~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~g~~~~ 94 (283)
T 3bjr_A 18 QGMQVIKQKLTA-TCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAE-SLAMAFAGHGYQAFYLEYTLLTDQ 94 (283)
T ss_dssp CSSEEEEEECTT-SSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHH-HHHHHHHTTTCEEEEEECCCTTTC
T ss_pred CCcceEEeecCC-CceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccH-HHHHHHHhCCcEEEEEeccCCCcc
Confidence 445677888899 88999888 7652 134788999999997532212 1232 244556669999999999998764
Q ss_pred chhHHhcccccCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhhCCCe-------------eeEE
Q 004766 526 GEEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRPDL-------------FGCA 589 (732)
Q Consensus 526 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p~~-------------f~a~ 589 (732)
+ ........|+.+++++|.+.. .+|+++|+++|+|+||.+++.++.++|+. ++++
T Consensus 95 ~---------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~ 165 (283)
T 3bjr_A 95 Q---------PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNV 165 (283)
T ss_dssp S---------SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSE
T ss_pred c---------cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEE
Confidence 3 122345789999999998753 36788999999999999999999999987 8999
Q ss_pred EEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHH
Q 004766 590 LAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSL 669 (732)
Q Consensus 590 v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~ 669 (732)
|+.+|+.++........ ..+...++ .+...+|...+.+ +.+|+|++||.+|..||+.++.
T Consensus 166 v~~~p~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~----------~~~P~lii~G~~D~~~p~~~~~ 225 (283)
T 3bjr_A 166 VLGYPVISPLLGFPKDD-ATLATWTP---------TPNELAADQHVNS----------DNQPTFIWTTADDPIVPATNTL 225 (283)
T ss_dssp EEESCCCCTTSBC---------CCCC---------CGGGGCGGGSCCT----------TCCCEEEEEESCCTTSCTHHHH
T ss_pred EEcCCcccccccccccc-chHHHHHH---------HhHhcCHHHhccC----------CCCCEEEEEcCCCCCCChHHHH
Confidence 99999887533211000 01111111 1234567666655 7899999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchH-----------HHHHHHHHHHHHHHHH
Q 004766 670 KLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQ-----------KMIDEAADRYGFMAKM 725 (732)
Q Consensus 670 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-----------~~~~~~~~~~~fl~~~ 725 (732)
+++++|+.. +.++++++++++||++..... ...+....+.+||.++
T Consensus 226 ~~~~~l~~~----------g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 226 AYATALATA----------KIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHHHHHHHT----------TCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHHHHHHHC----------CCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 999999987 889999999999997653321 1135566778888753
No 26
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.88 E-value=9.7e-22 Score=204.84 Aligned_cols=236 Identities=17% Similarity=0.105 Sum_probs=170.7
Q ss_pred CceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCc-cCCCCcChhHHHHHHhcCcEEEEEcccCCCCCc
Q 004766 448 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNI-SVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 526 (732)
Q Consensus 448 ~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g 526 (732)
.+.++.+.+++.|| ..|++.++.|++ ++.|+||++|||... .....+......++.+.||+|+.+|+|++++..
T Consensus 57 ~~~~~~~~i~~~~G-~~i~~~~~~P~~----~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~ 131 (317)
T 3qh4_A 57 GVAVADDVVTGEAG-RPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHP 131 (317)
T ss_dssp CCEEEEEEEECTTS-CEEEEEEEECSC----SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred cceEEEEEecCCCC-CeEEEEEEecCC----CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 45778899999999 999999999975 578999999997532 222334444455555569999999999887632
Q ss_pred hhHHhcccccCCccHHHHHHHHHHHHHHc---CCCCCCcEEEEecChhHHHHHHHHhhCCC----eeeEEEEcCCccccc
Q 004766 527 EEWHKGGALAKKQNCFDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQRPD----LFGCALAHVGVMDML 599 (732)
Q Consensus 527 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~p~----~f~a~v~~~p~~d~~ 599 (732)
....++|+.++++|+.++ -.+|++||+|+|+|+||.+++.++.++++ .++++|+.+|++|..
T Consensus 132 -----------~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 200 (317)
T 3qh4_A 132 -----------YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR 200 (317)
T ss_dssp -----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS
T ss_pred -----------CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC
Confidence 245689999999999885 34689999999999999999999987655 489999999999875
Q ss_pred ccccCCCCCccccccCC-C-CCHHH----HHHHHh-------cCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCch
Q 004766 600 RYHKFTIGHAWVSDFGC-S-EEEEE----FYWLIK-------YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPL 666 (732)
Q Consensus 600 ~~~~~~~~~~~~~~~g~-p-~~~~~----~~~~~~-------~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~ 666 (732)
.... ..++.. + ..... +..+.. .+|.....- ...||+||+||++|..++
T Consensus 201 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l---------~~lpP~li~~G~~D~~~~-- 262 (317)
T 3qh4_A 201 PTAS-------RSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGRRGQL---------AGLPATLITCGEIDPFRD-- 262 (317)
T ss_dssp CCHH-------HHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGGCSCC---------TTCCCEEEEEEEESTTHH--
T ss_pred CCcC-------HHHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCccccc---------CCCCceeEEecCcCCCch--
Confidence 1110 011110 1 11111 111111 123222111 245799999999999876
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCC---chHHHHHHHHHHHHHHHHHhC
Q 004766 667 HSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGL---PTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 667 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~~~~~fl~~~l~ 727 (732)
++.+++++|+++ |.+++++++++++|++.. ......+..+.+.+||.++|+
T Consensus 263 ~~~~~a~~l~~~----------g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 263 EVLDYAQRLLGA----------GVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHHHHHHHHHT----------TCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHc----------CCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 889999999988 999999999999999642 112345777889999999885
No 27
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.88 E-value=1.4e-21 Score=204.19 Aligned_cols=228 Identities=17% Similarity=0.009 Sum_probs=158.9
Q ss_pred eEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCC-cChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHH
Q 004766 464 KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPS-FSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCF 542 (732)
Q Consensus 464 ~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~ 542 (732)
.|++.++.|++ .++.|+||++|||........ +......++...||+|+.+|+|++++.. ....+
T Consensus 66 ~i~~~~~~p~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-----------~~~~~ 131 (322)
T 3fak_A 66 GCAAEWVRAPG---CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHP-----------FPAAV 131 (322)
T ss_dssp TEEEEEEECTT---CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSC-----------TTHHH
T ss_pred CeEEEEEeCCC---CCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCC-----------CCcHH
Confidence 48899999976 357899999999864322222 2222334444469999999999987532 34567
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCe----eeEEEEcCCcccccccccCCCCCccc-cccCCC
Q 004766 543 DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL----FGCALAHVGVMDMLRYHKFTIGHAWV-SDFGCS 617 (732)
Q Consensus 543 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~----f~a~v~~~p~~d~~~~~~~~~~~~~~-~~~g~p 617 (732)
+|+.++++||.++ .+|++||+|+|+|+||++++.++.+.|+. ++++|+.+|++|+........ .... ..+-..
T Consensus 132 ~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~-~~~~~~~~~~~ 209 (322)
T 3fak_A 132 EDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFK-TRAEADPMVAP 209 (322)
T ss_dssp HHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHH-HTTTTCCSCCS
T ss_pred HHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHH-HhCccCcccCH
Confidence 9999999999998 56999999999999999999999876664 999999999998743221000 0000 000000
Q ss_pred CCHH-HHHHH--------HhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCC
Q 004766 618 EEEE-EFYWL--------IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQ 688 (732)
Q Consensus 618 ~~~~-~~~~~--------~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 688 (732)
.... ....+ ...||+...-. ..||+||+||..|..+ .++.+++++|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~----------~~pP~li~~g~~D~~~--~~~~~~~~~l~~~---------- 267 (322)
T 3fak_A 210 GGINKMAARYLNGADAKHPYASPNFANLK----------GLPPLLIHVGRDEVLL--DDSIKLDAKAKAD---------- 267 (322)
T ss_dssp SHHHHHHHHHHTTSCTTCTTTCGGGSCCT----------TCCCEEEEEETTSTTH--HHHHHHHHHHHHT----------
T ss_pred HHHHHHHHHhcCCCCCCCcccCCCccccc----------CCChHhEEEcCcCccH--HHHHHHHHHHHHc----------
Confidence 1000 01111 12355533222 4689999999999764 5899999999998
Q ss_pred CCCEEEEEeCCCCCCCCCc---hHHHHHHHHHHHHHHHHHhCCC
Q 004766 689 TNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 689 ~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
|++++++++++++|++... ..+..+.++.+.+||.++|+..
T Consensus 268 g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3fak_A 268 GVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWAAL 311 (322)
T ss_dssp TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999987521 2234577788999999998654
No 28
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.87 E-value=1e-21 Score=222.35 Aligned_cols=258 Identities=13% Similarity=0.065 Sum_probs=178.6
Q ss_pred CCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCcc----CC-CCcChhHH---HHHHhcCcEEEEEc
Q 004766 447 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNIS----VT-PSFSVSRT---ILMRHLGAVFCIAN 518 (732)
Q Consensus 447 ~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~----~~-~~~~~~~~---~~l~~~G~~v~~~~ 518 (732)
..+..+.+.+++.|| .+|.++++.|++. ++.|+||+.||..+.. .. ..|...+. .+|+++||+|+.+|
T Consensus 21 ~~~~~~~v~i~~~DG-~~L~~~~~~P~~~---~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D 96 (615)
T 1mpx_A 21 NDYIKREVMIPMRDG-VKLHTVIVLPKGA---KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQD 96 (615)
T ss_dssp CSEEEEEEEEECTTS-CEEEEEEEEETTC---CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred CCCEEEEEEEECCCC-CEEEEEEEeCCCC---CCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEEC
Confidence 456778899999999 9999999999863 6789999999744321 11 11211111 45666999999999
Q ss_pred ccCCCCCchhHHhcc-----cccCCccHHHHHHHHHHHHHHc-CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEc
Q 004766 519 IRGGGEYGEEWHKGG-----ALAKKQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH 592 (732)
Q Consensus 519 ~rG~g~~g~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~ 592 (732)
+||+|+++..+.... ...++....+|+.++++||.++ ++.| .||+++|+||||+++++++.++|+.|+|+|+.
T Consensus 97 ~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~ 175 (615)
T 1mpx_A 97 VRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVPE 175 (615)
T ss_dssp CTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEEE
T ss_pred CCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEec
Confidence 999998877654331 1122226789999999999998 7877 59999999999999999998889999999999
Q ss_pred CCcccccc-cccCCCCC------ccccccC----CC--------C----------------------CHH---------H
Q 004766 593 VGVMDMLR-YHKFTIGH------AWVSDFG----CS--------E----------------------EEE---------E 622 (732)
Q Consensus 593 ~p~~d~~~-~~~~~~~~------~~~~~~g----~p--------~----------------------~~~---------~ 622 (732)
+|+.|+.. ......+. .|...++ .+ + .+- .
T Consensus 176 ~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 255 (615)
T 1mpx_A 176 SPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAY 255 (615)
T ss_dssp SCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSS
T ss_pred CCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCCc
Confidence 99999543 10000000 0100000 00 0 000 0
Q ss_pred HHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCC---CEEEEEeCC
Q 004766 623 FYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTN---PIIGRIERK 699 (732)
Q Consensus 623 ~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~ 699 (732)
-+++++.||..++++. .++.|+|++||.+|.+ ++.++.+++++|++. |. ++.+++.|.
T Consensus 256 d~~w~~~Sp~~~~~~~--------~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~----------g~p~~~~~lvigp~ 316 (615)
T 1mpx_A 256 DAFWQEQALDKVMART--------PLKVPTMWLQGLWDQE-DMWGAIHSYAAMEPR----------DKRNTLNYLVMGPW 316 (615)
T ss_dssp CHHHHTTCHHHHHHTS--------CCCSCEEEEEETTCSS-CSSHHHHHHHHHGGG----------CTTSSSEEEEEESC
T ss_pred ChhhhhcChhhhhhcc--------CCCCCEEEeecccCcc-ccccHHHHHHHHHhh----------cCCCcCCEEEECCC
Confidence 0234566777665441 1689999999999998 889999999999987 54 489999888
Q ss_pred CCCCCCC------------chHHHHHHHHHHHHHHHHHhCCC
Q 004766 700 AGHGVGL------------PTQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 700 ~gH~~~~------------~~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
+|+... ...........++.||.++|+..
T Consensus 317 -~H~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 357 (615)
T 1mpx_A 317 -RHSQVNYDGSALGALNFEGDTARQFRHDVLRPFFDQYLVDG 357 (615)
T ss_dssp -CTTGGGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred -CCCCccccccccCccccCcccchhhhhhHHHHHHHHHhcCC
Confidence 697510 11111223567899999999753
No 29
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.87 E-value=1e-21 Score=200.83 Aligned_cols=249 Identities=13% Similarity=0.119 Sum_probs=164.5
Q ss_pred eEEEEEEEc-cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCC----
Q 004766 450 HVHQVFVPS-KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGE---- 524 (732)
Q Consensus 450 ~~~~~~~~s-~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~---- 524 (732)
..+++.+.| .+| .++++.++.|++...++++|+||++||+.+....+........+++++|++|+++|.++.|.
T Consensus 14 ~~~~~~~~s~~~g-~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~ 92 (280)
T 3ls2_A 14 WHKQYTHSAVSTH-CTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPN 92 (280)
T ss_dssp EEEEEEEEETTTT-EEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCC
T ss_pred eEEEEEEechhcC-CceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCccccccccc
Confidence 445666665 478 99999999999876678899999999987654321111123456676899999999764432
Q ss_pred -------CchhHHhcccccC--Cc-cHHHHHHHH-HHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcC
Q 004766 525 -------YGEEWHKGGALAK--KQ-NCFDDFISA-SEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHV 593 (732)
Q Consensus 525 -------~g~~~~~~~~~~~--~~-~~~~D~~~~-~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~ 593 (732)
.|..|+....... .. ...+.+... +.++.+. +..++|++|+|+|+||++++.++.++|++|+++++.+
T Consensus 93 ~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s 171 (280)
T 3ls2_A 93 EDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQH-FPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFS 171 (280)
T ss_dssp CSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHH-SSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEES
T ss_pred ccccccccCCccccccccccccccccHHHHHHHHHHHHHHhh-CCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEec
Confidence 2233332221110 11 122333333 3444333 3335899999999999999999999999999999999
Q ss_pred CcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchH-HHHHH
Q 004766 594 GVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH-SLKLL 672 (732)
Q Consensus 594 p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~-~~~~~ 672 (732)
|++++..... .. ..+...+|.. .+ .+..++|...+++.. ....+|+||+||++|..|+... +.+++
T Consensus 172 ~~~~~~~~~~-~~-~~~~~~~g~~--~~---~~~~~~~~~~~~~~~------~~~~~p~li~~G~~D~~v~~~~~~~~~~ 238 (280)
T 3ls2_A 172 PIVNPINCPW-GV-KAFTGYLGAD--KT---TWAQYDSCKLMAKAE------QSNYLPMLVSQGDADNFLDEQLKPQNLV 238 (280)
T ss_dssp CCSCGGGSHH-HH-HHHHHHHCSC--GG---GTGGGCHHHHHHTCC------GGGCCCEEEEEETTCTTCCCCCCHHHHH
T ss_pred CccCcccCcc-hh-hHHHhhcCch--HH---HHHhcCHHHHHHhcc------ccCCCcEEEEEeCCCcccCCchhHHHHH
Confidence 9887643110 00 0001112321 11 123445555544420 0026799999999999999855 89999
Q ss_pred HHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 673 ATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 673 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
++|+++ |.+++++++++++|.+.. ........++|+.++|.
T Consensus 239 ~~l~~~----------g~~~~~~~~~g~~H~~~~----~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 239 AVAKQK----------DYPLTLEMQTGYDHSYFF----ISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HHHHHH----------TCCEEEEEETTCCSSHHH----HHHHHHHHHHHHHHHHC
T ss_pred HHHHHh----------CCCceEEEeCCCCCchhh----HHHHHHHHHHHHHHHhc
Confidence 999998 899999999999998632 23556678899998874
No 30
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.87 E-value=6.4e-22 Score=209.20 Aligned_cols=240 Identities=16% Similarity=0.148 Sum_probs=171.0
Q ss_pred CCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCc
Q 004766 447 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 526 (732)
Q Consensus 447 ~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g 526 (732)
..+..+.+.+.+.+| .+|+++++.|++ .++.|+||++||+.+.... |.. ...++. +||.|+++|+||.|+.+
T Consensus 78 ~~~~~~~~~~~~~~g-~~l~~~~~~P~~---~~~~p~vv~~HG~g~~~~~--~~~-~~~~~~-~G~~v~~~D~rG~g~s~ 149 (346)
T 3fcy_A 78 SFAECYDLYFTGVRG-ARIHAKYIKPKT---EGKHPALIRFHGYSSNSGD--WND-KLNYVA-AGFTVVAMDVRGQGGQS 149 (346)
T ss_dssp TTEEEEEEEEECGGG-CEEEEEEEEESC---SSCEEEEEEECCTTCCSCC--SGG-GHHHHT-TTCEEEEECCTTSSSSC
T ss_pred CceEEEEEEEEcCCC-CEEEEEEEecCC---CCCcCEEEEECCCCCCCCC--hhh-hhHHHh-CCcEEEEEcCCCCCCCC
Confidence 456788899999999 999999999986 4688999999999876533 332 335555 99999999999998765
Q ss_pred hhHHhc-----------ccc-cC----CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEE
Q 004766 527 EEWHKG-----------GAL-AK----KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCAL 590 (732)
Q Consensus 527 ~~~~~~-----------~~~-~~----~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v 590 (732)
...... +.. .. -...++|+.++++++.....+|++||+++|+|+||.+++.++.++|+ ++++|
T Consensus 150 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~v 228 (346)
T 3fcy_A 150 QDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVV 228 (346)
T ss_dssp CCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEE
T ss_pred CCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEE
Confidence 432111 000 00 01236999999999999888899999999999999999999999998 99999
Q ss_pred EcCCcccccc-cccCC-CCCccc--c---ccCCC---CCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCC
Q 004766 591 AHVGVMDMLR-YHKFT-IGHAWV--S---DFGCS---EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHD 660 (732)
Q Consensus 591 ~~~p~~d~~~-~~~~~-~~~~~~--~---~~g~p---~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D 660 (732)
+.+|+++-.. ..... ....+. . .+..| .....+..+..+++...+.+ +.+|+|+++|.+|
T Consensus 229 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----------i~~P~lii~G~~D 298 (346)
T 3fcy_A 229 SEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKR----------IKGDVLMCVGLMD 298 (346)
T ss_dssp EESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGG----------CCSEEEEEEETTC
T ss_pred ECCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHh----------cCCCEEEEeeCCC
Confidence 9999764321 11111 000000 0 01112 22333344444555555554 7899999999999
Q ss_pred CCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 661 DRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 661 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
..||+.++.++++++. + ++++++++++||++.. +....+.+||.+
T Consensus 299 ~~~~~~~~~~~~~~~~------------~-~~~~~~~~~~gH~~~~------~~~~~i~~fl~~ 343 (346)
T 3fcy_A 299 QVCPPSTVFAAYNNIQ------------S-KKDIKVYPDYGHEPMR------GFGDLAMQFMLE 343 (346)
T ss_dssp SSSCHHHHHHHHTTCC------------S-SEEEEEETTCCSSCCT------THHHHHHHHHHT
T ss_pred CcCCHHHHHHHHHhcC------------C-CcEEEEeCCCCCcCHH------HHHHHHHHHHHH
Confidence 9999998887776553 2 6899999999999872 234467788865
No 31
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.87 E-value=4.6e-22 Score=203.51 Aligned_cols=247 Identities=17% Similarity=0.111 Sum_probs=165.5
Q ss_pred eEEEEEEEc-cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCC----
Q 004766 450 HVHQVFVPS-KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGE---- 524 (732)
Q Consensus 450 ~~~~~~~~s-~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~---- 524 (732)
..+.+.+.+ .+| .++++.++.|++...+++.|+||++||+.+.............+++++|++|+++|.|+.|.
T Consensus 16 ~~~~~~~~s~~~g-~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~ 94 (280)
T 3i6y_A 16 WHKQYSHVSNTLN-CAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVAD 94 (280)
T ss_dssp EEEEEEEEETTTT-EEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCC
T ss_pred cEEEEEEeccccC-CeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCc
Confidence 456666655 578 99999999999876678899999999987664321111113466777899999999875442
Q ss_pred -------CchhHHhcccccC---CccHHHHHH-HHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcC
Q 004766 525 -------YGEEWHKGGALAK---KQNCFDDFI-SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHV 593 (732)
Q Consensus 525 -------~g~~~~~~~~~~~---~~~~~~D~~-~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~ 593 (732)
.|..|+....... .....+.+. +++.++.+...+ ++|++|+|+|+||++++.++.++|++|+++|+.+
T Consensus 95 ~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s 173 (280)
T 3i6y_A 95 DEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFS 173 (280)
T ss_dssp CSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEES
T ss_pred ccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeC
Confidence 1122222211100 001123332 344455444333 6899999999999999999999999999999999
Q ss_pred CcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchH-HHHHH
Q 004766 594 GVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH-SLKLL 672 (732)
Q Consensus 594 p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~-~~~~~ 672 (732)
|++++..... .. ..+...+|.. ... +..++|...++.. ...+|+||+||++|..|+..+ +.+++
T Consensus 174 ~~~~~~~~~~-~~-~~~~~~~~~~--~~~---~~~~~~~~~~~~~--------~~~~P~li~~G~~D~~v~~~~~~~~~~ 238 (280)
T 3i6y_A 174 PINNPVNCPW-GQ-KAFTAYLGKD--TDT---WREYDASLLMRAA--------KQYVPALVDQGEADNFLAEQLKPEVLE 238 (280)
T ss_dssp CCCCGGGSHH-HH-HHHHHHHCSC--GGG---TGGGCHHHHHHHC--------SSCCCEEEEEETTCTTHHHHTCHHHHH
T ss_pred CccccccCch-HH-HHHHHhcCCc--hHH---HHhcCHHHHHHhc--------CCCccEEEEEeCCCccccchhhHHHHH
Confidence 9887643110 00 0011112221 111 2345666555542 124899999999999999765 89999
Q ss_pred HHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 673 ATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 673 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
++|+++ |.+++++++++++|.+.. ......+.++|+.++|.
T Consensus 239 ~~l~~~----------g~~~~~~~~~g~~H~~~~----~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 239 AAASSN----------NYPLELRSHEGYDHSYYF----IASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHHHHT----------TCCEEEEEETTCCSSHHH----HHHHHHHHHHHHHHHHT
T ss_pred HHHHHc----------CCCceEEEeCCCCccHHH----HHHhHHHHHHHHHhhcc
Confidence 999988 899999999999998632 34566778899998875
No 32
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.87 E-value=1.9e-21 Score=220.89 Aligned_cols=254 Identities=13% Similarity=0.059 Sum_probs=178.0
Q ss_pred CceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCcc-CCCCcC-----hhH--H-HHHHhcCcEEEEEc
Q 004766 448 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNIS-VTPSFS-----VSR--T-ILMRHLGAVFCIAN 518 (732)
Q Consensus 448 ~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~-~~~~~~-----~~~--~-~~l~~~G~~v~~~~ 518 (732)
.+..+.+.+++.|| ++|.++++.|++. ++.|+||+.||..... ....|. ..+ . ++|+++||+|+.+|
T Consensus 34 ~~~~~~v~i~~~DG-~~L~~~l~~P~~~---~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D 109 (652)
T 2b9v_A 34 DYIKREVMVPMRDG-VKLYTVIVIPKNA---RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQD 109 (652)
T ss_dssp SEEEEEEEEECTTS-CEEEEEEEEETTC---CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred CcEEEEEEEECCCC-cEEEEEEEecCCC---CCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEe
Confidence 46678899999999 9999999999863 6789999998633220 011111 111 1 45566999999999
Q ss_pred ccCCCCCchhHHhcc-----cccCCccHHHHHHHHHHHHHHc-CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEc
Q 004766 519 IRGGGEYGEEWHKGG-----ALAKKQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH 592 (732)
Q Consensus 519 ~rG~g~~g~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~ 592 (732)
+||+|+++..|.... ...++....+|+.++++||.++ +++| .||+++|+|+||+++++++.++|+.|+|+|+.
T Consensus 110 ~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~ 188 (652)
T 2b9v_A 110 IRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAPE 188 (652)
T ss_dssp CTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEE
T ss_pred cCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEec
Confidence 999999887764432 1112236889999999999999 8887 59999999999999999999889999999999
Q ss_pred CCcccccc-cccCCCCC------ccccc------------------c----------------------------CCCCC
Q 004766 593 VGVMDMLR-YHKFTIGH------AWVSD------------------F----------------------------GCSEE 619 (732)
Q Consensus 593 ~p~~d~~~-~~~~~~~~------~~~~~------------------~----------------------------g~p~~ 619 (732)
+|+.|+.. ......+. .|... | +.|..
T Consensus 189 ~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 268 (652)
T 2b9v_A 189 SPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAY 268 (652)
T ss_dssp EECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCSS
T ss_pred ccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCCC
Confidence 99999753 11000000 01000 0 00000
Q ss_pred HHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCC--CCEEEEEe
Q 004766 620 EEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT--NPIIGRIE 697 (732)
Q Consensus 620 ~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~ 697 (732)
-+++++.||..++++. .++.|+|++||.+|.+ +..++.+++++|++. + +++.+++.
T Consensus 269 ---d~yw~~~Sp~~~~~~~--------~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~----------g~~~~~~lvig 326 (652)
T 2b9v_A 269 ---DAFWQGQALDKILAQR--------KPTVPMLWEQGLWDQE-DMWGAIHAWQALKDA----------DVKAPNTLVMG 326 (652)
T ss_dssp ---SHHHHTTCHHHHHHHH--------CCCSCEEEEEETTCSS-CSSHHHHHHHHHHHT----------TCSSCEEEEEE
T ss_pred ---ChHHhcCChhhhhhcC--------CCCCCEEEEeecCCcc-ccccHHHHHHHHHhc----------CCCCCCEEEEC
Confidence 0123456776554431 1688999999999998 778999999999987 6 88999998
Q ss_pred CCCCCCCCC-----c-------hHHHHHHHHHHHHHHHHHhCCC
Q 004766 698 RKAGHGVGL-----P-------TQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 698 ~~~gH~~~~-----~-------~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
|. +|+... . ..........++.||.++|+..
T Consensus 327 p~-~H~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 369 (652)
T 2b9v_A 327 PW-RHSGVNYNGSTLGPLEFEGDTAHQYRRDVFRPFFDEYLKPG 369 (652)
T ss_dssp SC-CTTGGGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred CC-CCCCcccccccCCccccccccchhhhhhHHHHHHHHHhCCC
Confidence 86 797511 0 1111223567899999999753
No 33
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.87 E-value=1.2e-20 Score=199.65 Aligned_cols=240 Identities=14% Similarity=0.087 Sum_probs=163.3
Q ss_pred CceEEEEEEEccCCCeeEEEEEEEcCCCC--------------CCCCccEEEEEcCCCCccCCCC---cChhHHHHHHhc
Q 004766 448 EFHVHQVFVPSKDGSTKIPMFIVSKKNIK--------------LDGSHPCLLYGYGGFNISVTPS---FSVSRTILMRHL 510 (732)
Q Consensus 448 ~~~~~~~~~~s~dG~~~i~~~~~~p~~~~--------------~~~~~P~vv~~hG~~~~~~~~~---~~~~~~~~l~~~ 510 (732)
.+..+.+.+.+ + ..+++.++.|++.. ..++.|+||++|||........ |......+..++
T Consensus 69 ~v~~~dv~~~~--~-~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~ 145 (351)
T 2zsh_A 69 GVFSFDVLIDR--R-INLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLC 145 (351)
T ss_dssp TEEEEEEEEET--T-TTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHH
T ss_pred CceEEEEEecC--C-CCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHc
Confidence 34566677765 5 57889999998642 2467899999999754322222 333333444268
Q ss_pred CcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcC----CCCCC-cEEEEecChhHHHHHHHHhhCCC-
Q 004766 511 GAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG----YTQSR-KLCIEGGSNGGLLVGACINQRPD- 584 (732)
Q Consensus 511 G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-~i~i~G~S~GG~l~~~~~~~~p~- 584 (732)
||+|+.+|+||+++.. ....++|+.++++||.++. .+|++ ||+++|+|+||++++.++.++|+
T Consensus 146 g~~vv~~d~rg~~~~~-----------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~ 214 (351)
T 2zsh_A 146 KCVVVSVNYRRAPENP-----------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGES 214 (351)
T ss_dssp TSEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTT
T ss_pred CCEEEEecCCCCCCCC-----------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhcc
Confidence 9999999999987632 2356899999999999864 47899 99999999999999999999888
Q ss_pred --eeeEEEEcCCcccccccccCCCCCccccccCCC-CCHHHHHH-HHhcC------------cccCCCCCCCCCCCCCC-
Q 004766 585 --LFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCS-EEEEEFYW-LIKYS------------PLHNVRRPWEQNPDKPF- 647 (732)
Q Consensus 585 --~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p-~~~~~~~~-~~~~s------------p~~~~~~~~~~~~~~~~- 647 (732)
+++++|+.+|+++...... ......+.+ ......+. +..+. |+...... ...
T Consensus 215 ~~~v~~~vl~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~i 283 (351)
T 2zsh_A 215 GIDVLGNILLNPMFGGNERTE-----SEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKS------LEGV 283 (351)
T ss_dssp TCCCCEEEEESCCCCCSSCCH-----HHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCC------CTTC
T ss_pred CCCeeEEEEECCccCCCcCCh-----hhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccc------hhhC
Confidence 8999999999887542211 000011111 11111111 12222 22111110 001
Q ss_pred CCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc--hHHHHHHHHHHHHHHHH
Q 004766 648 QYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP--TQKMIDEAADRYGFMAK 724 (732)
Q Consensus 648 ~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~~~~~~fl~~ 724 (732)
..||+||+||++|..++ ++.+++++|++. +.++++++++++||++... .....+....+.+||.+
T Consensus 284 ~~pP~Lii~G~~D~~~~--~~~~~~~~l~~~----------g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 284 SFPKSLVVVAGLDLIRD--WQLAYAEGLKKA----------GQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp CCCEEEEEEETTSTTHH--HHHHHHHHHHHT----------TCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcCCCcchH--HHHHHHHHHHHc----------CCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 23699999999999876 788999999987 8899999999999998651 12235677788889864
No 34
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.87 E-value=1.2e-20 Score=204.99 Aligned_cols=223 Identities=13% Similarity=0.055 Sum_probs=159.2
Q ss_pred eEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHH
Q 004766 464 KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFD 543 (732)
Q Consensus 464 ~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~ 543 (732)
.+.+.++.|++ .++.|+||++||+.+. .+. .+..+|+++||+|+++|+||.|+....+ ....++
T Consensus 144 ~l~~~l~~P~~---~~~~P~Vv~~hG~~~~----~~~-~~a~~La~~Gy~V~a~D~rG~g~~~~~~--------~~~~~~ 207 (422)
T 3k2i_A 144 RVRATLFLPPG---PGPFPGIIDIFGIGGG----LLE-YRASLLAGHGFATLALAYYNFEDLPNNM--------DNISLE 207 (422)
T ss_dssp TEEEEEEECSS---SCCBCEEEEECCTTCS----CCC-HHHHHHHTTTCEEEEEECSSSTTSCSSC--------SCEETH
T ss_pred cEEEEEEcCCC---CCCcCEEEEEcCCCcc----hhH-HHHHHHHhCCCEEEEEccCCCCCCCCCc--------ccCCHH
Confidence 78999999986 3678999999998664 122 2356677799999999999987653322 224579
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc----c--CC-C----------
Q 004766 544 DFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH----K--FT-I---------- 606 (732)
Q Consensus 544 D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~----~--~~-~---------- 606 (732)
|+.+++++|.++..+++++|+|+|+|+||.+++.++.++|+ ++++|+.+|........ . .. .
T Consensus 208 d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (422)
T 3k2i_A 208 YFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVA 286 (422)
T ss_dssp HHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEEC
T ss_pred HHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhcccC
Confidence 99999999999988889999999999999999999999998 89999888876332110 0 00 0
Q ss_pred --C-CccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHH-HHHHHHHHHhhcCC
Q 004766 607 --G-HAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHS-LKLLATMQYVLCTS 682 (732)
Q Consensus 607 --~-~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~-~~~~~~l~~~~~~~ 682 (732)
+ ..+...+..+... ...++...+. .+.+|+|++||.+|..||+.+. ..+.++|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~----------~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~---- 346 (422)
T 3k2i_A 287 FSGLVDIVDIRNALVGG------YKNPSMIPIE----------KAQGPILLIVGQDDHNWRSELYAQTVSERLQAH---- 346 (422)
T ss_dssp TTSCEECTTCBCCCTTG------GGSTTBCCGG----------GCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHT----
T ss_pred cchhHHHHHHHhhhhhc------ccccccccHH----------HCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhc----
Confidence 0 0000111112110 0111122223 3788999999999999999876 6888899987
Q ss_pred CCCCCCCCC-EEEEEeCCCCCCCCCc--------------------------hHHHHHHHHHHHHHHHHHhCCC
Q 004766 683 LENSPQTNP-IIGRIERKAGHGVGLP--------------------------TQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 683 ~~~~~~~~~-~~~~~~~~~gH~~~~~--------------------------~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
+++ +++++++++||++..+ .....+.+..+.+||.++|+..
T Consensus 347 ------g~~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 347 ------GKEKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp ------TCCCCEEEEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred ------CCCCCEEEEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 777 8999999999998321 1223567889999999999753
No 35
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.87 E-value=4e-22 Score=204.04 Aligned_cols=248 Identities=14% Similarity=0.096 Sum_probs=160.5
Q ss_pred eEEEEEEEc-cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcc--cCCCCCc
Q 004766 450 HVHQVFVPS-KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANI--RGGGEYG 526 (732)
Q Consensus 450 ~~~~~~~~s-~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--rG~g~~g 526 (732)
..+.+.+.+ .+| ..+++.++.|++.. .++.|+||++||+.+..........+..+++++||+|+++|+ ||.|+.|
T Consensus 15 ~~~~~~~~s~~~~-~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~ 92 (282)
T 3fcx_A 15 LQKVFEHDSVELN-CKMKFAVYLPPKAE-TGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKG 92 (282)
T ss_dssp EEEEEEEEETTTT-EEEEEEEEECGGGG-TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--
T ss_pred cEEEEEEEchhcC-CeeEEEEEcCCCCC-CCCCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCcccccc
Confidence 344455544 578 89999999998753 368999999999876543211111124566669999999999 8887655
Q ss_pred hh----------HHhcccccC---CccHHHHHH-HHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEc
Q 004766 527 EE----------WHKGGALAK---KQNCFDDFI-SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH 592 (732)
Q Consensus 527 ~~----------~~~~~~~~~---~~~~~~D~~-~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~ 592 (732)
.. |+....... .....+++. ++++++.++--+|++||+|+|+|+||++++.++.++|++|+++|+.
T Consensus 93 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~ 172 (282)
T 3fcx_A 93 EDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAF 172 (282)
T ss_dssp ------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEE
T ss_pred ccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEe
Confidence 43 121111000 001233344 3444444343478999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchH--HHH
Q 004766 593 VGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH--SLK 670 (732)
Q Consensus 593 ~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~--~~~ 670 (732)
+|+.++....... ..+...+|.... .+..++|...+.... .+.+|+||+||++|..||+.+ +.+
T Consensus 173 s~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-------~~~~p~li~~G~~D~~v~~~~~~~~~ 238 (282)
T 3fcx_A 173 APICNPVLCPWGK--KAFSGYLGTDQS-----KWKAYDATHLVKSYP-------GSQLDILIDQGKDDQFLLDGQLLPDN 238 (282)
T ss_dssp SCCCCGGGSHHHH--HHHHHHHC---C-----CGGGGCHHHHHTTCC----------CCEEEEEETTCHHHHTTSSCHHH
T ss_pred CCccCcccCchhH--HHHHHhcCCchh-----hhhhcCHHHHHHhcc-------cCCCcEEEEcCCCCcccccchhhHHH
Confidence 9988754311000 001111222100 112345544333310 157899999999999997666 669
Q ss_pred HHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 671 LLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 671 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
++++|+++ +.++++++++++||.+.. ........+.|+.++|.
T Consensus 239 ~~~~l~~~----------g~~~~~~~~~g~~H~~~~----~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 239 FIAACTEK----------KIPVVFRLQEDYDHSYYF----IATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHHHT----------TCCEEEEEETTCCSSHHH----HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHc----------CCceEEEECCCCCcCHHH----HHhhhHHHHHHHHHhhc
Confidence 99999988 899999999999998742 23455677889888875
No 36
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.86 E-value=6.6e-22 Score=202.04 Aligned_cols=247 Identities=12% Similarity=0.054 Sum_probs=166.7
Q ss_pred eEEEEEEEc-cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCch-
Q 004766 450 HVHQVFVPS-KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE- 527 (732)
Q Consensus 450 ~~~~~~~~s-~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~- 527 (732)
..+.+.+.+ .+| .++++.++.|++.. +++.|+||++||+.+.............+++++||+|+++|.||.|....
T Consensus 14 ~~~~~~~~s~~~g-~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~ 91 (278)
T 3e4d_A 14 MQGVFSHQSETLK-SEMTFAVYVPPKAI-HEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPD 91 (278)
T ss_dssp EEEEEEEEETTTT-EEEEEEEEECGGGG-TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCC
T ss_pred cEEEEEEeccccC-CcceEEEEcCCCCC-CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCccccc
Confidence 445555644 578 99999999998754 57899999999987654321111113456676799999999998765321
Q ss_pred -----------hHHhccccc--CCccHHHHHH--HHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEc
Q 004766 528 -----------EWHKGGALA--KKQNCFDDFI--SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH 592 (732)
Q Consensus 528 -----------~~~~~~~~~--~~~~~~~D~~--~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~ 592 (732)
.|+...... .....+.+++ ++++++.+.--+|++|++|+|+|+||++++.++.++|++|+++|+.
T Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~ 171 (278)
T 3e4d_A 92 ELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAF 171 (278)
T ss_dssp CTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEE
T ss_pred ccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEe
Confidence 111111110 0111233333 3566666664578899999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchH-HHHH
Q 004766 593 VGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH-SLKL 671 (732)
Q Consensus 593 ~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~-~~~~ 671 (732)
+|++++..... .. ..+...+|.. ... +..++|...+... ...+|+||+||++|..|+... +.++
T Consensus 172 ~~~~~~~~~~~-~~-~~~~~~~~~~--~~~---~~~~~~~~~~~~~--------~~~~p~li~~G~~D~~v~~~~~~~~~ 236 (278)
T 3e4d_A 172 APIVAPSSADW-SE-PALEKYLGAD--RAA---WRRYDACSLVEDG--------ARFPEFLIDQGKADSFLEKGLRPWLF 236 (278)
T ss_dssp SCCSCGGGCTT-TH-HHHHHHHCSC--GGG---GGGGCHHHHHHTT--------CCCSEEEEEEETTCTTHHHHTCTHHH
T ss_pred CCcccccCCcc-ch-hhHHHhcCCc--HHH---HHhcChhhHhhcC--------CCCCcEEEEecCCCcccccchhHHHH
Confidence 99887643210 00 0011122321 111 2344555554442 246799999999999998533 7899
Q ss_pred HHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 672 LATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 672 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
+++|+++ |.+++++++++++|.+.. ........+.|+.++|+
T Consensus 237 ~~~l~~~----------g~~~~~~~~~g~~H~~~~----~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 237 EEAIKGT----------DIGLTLRMHDRYDHSYYF----ISTFMDDHLKWHAERLG 278 (278)
T ss_dssp HHHHTTS----------SCEEEEEEETTCCSSHHH----HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHc----------CCCceEEEeCCCCcCHHH----HHHHHHHHHHHHHHhcC
Confidence 9999987 899999999999998632 23456678899998875
No 37
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.86 E-value=4.9e-20 Score=192.37 Aligned_cols=237 Identities=15% Similarity=0.091 Sum_probs=167.4
Q ss_pred CCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCcc-CCCCcChhHHHHHH-hcCcEEEEEcccCCCC
Q 004766 447 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNIS-VTPSFSVSRTILMR-HLGAVFCIANIRGGGE 524 (732)
Q Consensus 447 ~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~-~~~~~~~~~~~~l~-~~G~~v~~~~~rG~g~ 524 (732)
....++.+.+++.+| .|++.++.|++ .++.|+||++|||.... ....|.. +...|+ +.||.|+++|+||.|+
T Consensus 61 ~~~~~~~~~i~~~~~--~i~~~iy~P~~---~~~~p~vv~~HGGg~~~g~~~~~~~-~~~~La~~~g~~Vv~~Dyrg~~~ 134 (323)
T 3ain_A 61 EVGKIEDITIPGSET--NIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIESYDP-LCRAITNSCQCVTISVDYRLAPE 134 (323)
T ss_dssp CCSEEEEEEEECSSS--EEEEEEEECSS---CSCCCEEEEECCSTTTSCCTTTTHH-HHHHHHHHHTSEEEEECCCCTTT
T ss_pred CccEEEEEEecCCCC--eEEEEEEecCC---CCCCcEEEEECCCccccCChHHHHH-HHHHHHHhcCCEEEEecCCCCCC
Confidence 456788889988777 79999999976 36789999999975322 2233443 334454 3499999999999886
Q ss_pred CchhHHhcccccCCccHHHHHHHHHHHHHHcCC-C-CCCcEEEEecChhHHHHHHHHhhCCCee---eEEEEcCCccccc
Q 004766 525 YGEEWHKGGALAKKQNCFDDFISASEYLISAGY-T-QSRKLCIEGGSNGGLLVGACINQRPDLF---GCALAHVGVMDML 599 (732)
Q Consensus 525 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~-~-d~~~i~i~G~S~GG~l~~~~~~~~p~~f---~a~v~~~p~~d~~ 599 (732)
.. ....++|+.++++|+.+... . |++||+|+|+|+||.+++.++.++|+.. +++|+.+|+++..
T Consensus 135 ~~-----------~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~ 203 (323)
T 3ain_A 135 NK-----------FPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFD 203 (323)
T ss_dssp SC-----------TTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCC
T ss_pred CC-----------CcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCC
Confidence 42 23467999999999987631 1 7899999999999999999998888766 8999999988753
Q ss_pred ccccCCCCCccccccC-CC-CCHHHHHH-HH------------hcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCC
Q 004766 600 RYHKFTIGHAWVSDFG-CS-EEEEEFYW-LI------------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVV 664 (732)
Q Consensus 600 ~~~~~~~~~~~~~~~g-~p-~~~~~~~~-~~------------~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~ 664 (732)
.... .+ .++. .+ -......+ .. ..+|+.. .. ...||+||++|++|..+
T Consensus 204 ~~~~-----~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~--~l--------~~l~P~lii~G~~D~l~- 266 (323)
T 3ain_A 204 LITK-----SL-YDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILA--DL--------NDLPPALIITAEHDPLR- 266 (323)
T ss_dssp SCCH-----HH-HHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGS--CC--------TTCCCEEEEEETTCTTH-
T ss_pred CCCc-----cH-HHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccC--cc--------cCCCHHHEEECCCCccH-
Confidence 2210 00 0000 00 01111111 01 2345443 11 14579999999999987
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc---hHHHHHHHHHHHHHHHHHhCC
Q 004766 665 PLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 665 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~ 728 (732)
.++.+++++|+++ +.+++++++++++|++... .....+....+.+||.++|+.
T Consensus 267 -~~~~~~a~~l~~a----------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 322 (323)
T 3ain_A 267 -DQGEAYANKLLQS----------GVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFYG 322 (323)
T ss_dssp -HHHHHHHHHHHHT----------TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHc----------CCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhcC
Confidence 4889999999988 8999999999999997641 122356777889999988753
No 38
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.86 E-value=1.5e-20 Score=195.32 Aligned_cols=240 Identities=12% Similarity=0.059 Sum_probs=167.4
Q ss_pred CCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC-CCcChhHHHHHHhc-CcEEEEEcccCCCC
Q 004766 447 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHL-GAVFCIANIRGGGE 524 (732)
Q Consensus 447 ~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~-~~~~~~~~~~l~~~-G~~v~~~~~rG~g~ 524 (732)
....++.+.+++.+| +|++.++.|++. .++.|+||++|||...... ..|.. +...|+++ ||.|+.+|+||.|+
T Consensus 44 ~~~~~~~~~i~~~~g--~l~~~~~~P~~~--~~~~p~vv~~HGGg~~~g~~~~~~~-~~~~la~~~g~~v~~~d~rg~~~ 118 (310)
T 2hm7_A 44 PVAEVREFDMDLPGR--TLKVRMYRPEGV--EPPYPALVYYHGGSWVVGDLETHDP-VCRVLAKDGRAVVFSVDYRLAPE 118 (310)
T ss_dssp CCSEEEEEEEEETTE--EEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTTTTHH-HHHHHHHHHTSEEEEECCCCTTT
T ss_pred CcceEEEEEeccCCC--eEEEEEEecCCC--CCCCCEEEEECCCccccCChhHhHH-HHHHHHHhcCCEEEEeCCCCCCC
Confidence 345778888988766 899999999863 3678999999997533222 33433 34445444 99999999999886
Q ss_pred CchhHHhcccccCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhhCCC----eeeEEEEcCCccc
Q 004766 525 YGEEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRPD----LFGCALAHVGVMD 597 (732)
Q Consensus 525 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p~----~f~a~v~~~p~~d 597 (732)
.. .....+|+.++++|+.+.. .+|+++|+++|+|+||.+++.++.++|+ .++++|+.+|+.+
T Consensus 119 ~~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~ 187 (310)
T 2hm7_A 119 HK-----------FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTG 187 (310)
T ss_dssp SC-----------TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCC
T ss_pred CC-----------CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcC
Confidence 42 2345789999999998874 3578999999999999999999988776 6999999999887
Q ss_pred ccccccCCCCCccccccC-CC-CCHHHHHHH-H------------hcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCC
Q 004766 598 MLRYHKFTIGHAWVSDFG-CS-EEEEEFYWL-I------------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDR 662 (732)
Q Consensus 598 ~~~~~~~~~~~~~~~~~g-~p-~~~~~~~~~-~------------~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~ 662 (732)
...... ...+ .++. .+ .......++ . ..+|.....- ...+|+||+||.+|..
T Consensus 188 ~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l---------~~~~P~lii~G~~D~~ 254 (310)
T 2hm7_A 188 YDPAHP---PASI-EENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDL---------SGLPPAYIATAQYDPL 254 (310)
T ss_dssp CCTTSC---CHHH-HHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCC---------TTCCCEEEEEEEECTT
T ss_pred CCcccC---Ccch-hhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccc---------cCCCCEEEEEecCCCc
Confidence 641110 0000 0010 00 111111111 1 1234332111 1346999999999998
Q ss_pred CCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc---hHHHHHHHHHHHHHHHHHhC
Q 004766 663 VVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 663 v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~ 727 (732)
+ .++.+++++|+++ |.++++++++++||++... ..+..+....+.+||.++|+
T Consensus 255 ~--~~~~~~~~~l~~~----------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 255 R--DVGKLYAEALNKA----------GVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp H--HHHHHHHHHHHHT----------TCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred h--HHHHHHHHHHHHC----------CCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 7 6899999999987 8899999999999987531 12234667788999998874
No 39
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.86 E-value=1.9e-20 Score=204.34 Aligned_cols=222 Identities=15% Similarity=0.090 Sum_probs=158.4
Q ss_pred eEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHH
Q 004766 464 KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFD 543 (732)
Q Consensus 464 ~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~ 543 (732)
.|++.++.|++ .++.|+||++||+.+.. +. .+..+|+++||+|+++|+||.++.+.. .....++
T Consensus 160 ~l~~~l~~P~~---~~~~P~Vv~lhG~~~~~----~~-~~a~~La~~Gy~Vla~D~rG~~~~~~~--------~~~~~~~ 223 (446)
T 3hlk_A 160 RVRGTLFLPPE---PGPFPGIVDMFGTGGGL----LE-YRASLLAGKGFAVMALAYYNYEDLPKT--------METLHLE 223 (446)
T ss_dssp TEEEEEEECSS---SCCBCEEEEECCSSCSC----CC-HHHHHHHTTTCEEEEECCSSSTTSCSC--------CSEEEHH
T ss_pred eEEEEEEeCCC---CCCCCEEEEECCCCcch----hh-HHHHHHHhCCCEEEEeccCCCCCCCcc--------hhhCCHH
Confidence 68999999976 36789999999986642 22 235667779999999999998765432 1224589
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc----c-----CC---------
Q 004766 544 DFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH----K-----FT--------- 605 (732)
Q Consensus 544 D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~----~-----~~--------- 605 (732)
|+.+++++|.++..+|+++|+++|+|+||.+++.++.++|+ ++++|+.+|........ . ..
T Consensus 224 d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (446)
T 3hlk_A 224 YFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVT 302 (446)
T ss_dssp HHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEEC
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhccccc
Confidence 99999999999988899999999999999999999999998 88998888865321100 0 00
Q ss_pred -CC-CccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHH-HHHHHHHHHhhcCC
Q 004766 606 -IG-HAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHS-LKLLATMQYVLCTS 682 (732)
Q Consensus 606 -~~-~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~-~~~~~~l~~~~~~~ 682 (732)
.+ ..+...+..+.... .......+.+ +.+|+|++||.+|..||+.+. ..++++|+++
T Consensus 303 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~----------i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~---- 362 (446)
T 3hlk_A 303 KDGYADIVDVLNSPLEGP------DQKSFIPVER----------AESTFLFLVGQDDHNWKSEFYANEACKRLQAH---- 362 (446)
T ss_dssp SSSCEECTTCBCCTTSGG------GGGGBCCGGG----------CCSEEEEEEETTCCSSCHHHHHHHHHHHHHHT----
T ss_pred cchHHHHHHHHhchhhcc------ccccccCHHH----------CCCCEEEEEeCCCCCcChHHHHHHHHHHHHHc----
Confidence 00 00111122221110 0011112232 678999999999999999664 7899999987
Q ss_pred CCCCCCCCC-EEEEEeCCCCCCCCC--------------------------chHHHHHHHHHHHHHHHHHhCC
Q 004766 683 LENSPQTNP-IIGRIERKAGHGVGL--------------------------PTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 683 ~~~~~~~~~-~~~~~~~~~gH~~~~--------------------------~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
+.+ +++++++++||++.. ......+.+..+.+||.++|+.
T Consensus 363 ------g~~~~~l~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~ 429 (446)
T 3hlk_A 363 ------GRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGG 429 (446)
T ss_dssp ------TCCCCEEEEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred ------CCCCcEEEEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 777 899999999999831 1112356788999999999975
No 40
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.86 E-value=1.2e-20 Score=197.22 Aligned_cols=242 Identities=17% Similarity=0.137 Sum_probs=169.2
Q ss_pred CCceEEEEEEEccCCCe-eEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC-CCcChhHHHHHHhcCcEEEEEcccCCCC
Q 004766 447 SEFHVHQVFVPSKDGST-KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGGE 524 (732)
Q Consensus 447 ~~~~~~~~~~~s~dG~~-~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~g~ 524 (732)
..+.++.+.+++.+| . +|++.++.|++. .++.|+||++|||...... ..|......+..+.||.|+.+|+||.|+
T Consensus 47 ~~~~~~~~~i~~~~g-~~~l~~~~~~P~~~--~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~ 123 (323)
T 1lzl_A 47 DGVSLRELSAPGLDG-DPEVKIRFVTPDNT--AGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPE 123 (323)
T ss_dssp TTEEEEEEEECCSTT-CCCEEEEEEEESSC--CSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTT
T ss_pred CCceEEEEEecCCCC-CceeEEEEEecCCC--CCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCC
Confidence 356788899999999 7 899999999752 4678999999998632212 2333333444443599999999999886
Q ss_pred CchhHHhcccccCCccHHHHHHHHHHHHHHc---CCCCCCcEEEEecChhHHHHHHHHhhCCC----eeeEEEEcCCccc
Q 004766 525 YGEEWHKGGALAKKQNCFDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQRPD----LFGCALAHVGVMD 597 (732)
Q Consensus 525 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~p~----~f~a~v~~~p~~d 597 (732)
.. .....+|+.++++|+.+. -.+|++||+|+|+|+||++++.++.++|+ .++++|+.+|+.+
T Consensus 124 ~~-----------~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 192 (323)
T 1lzl_A 124 TT-----------FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELD 192 (323)
T ss_dssp SC-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCC
T ss_pred CC-----------CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccC
Confidence 42 234578999999999874 23678999999999999999999987766 4999999999987
Q ss_pred ccccccCCCCCccccccCC-C-CCHHH----HHHHH--------------hcCcccCCCCCCCCCCCCCCCCCeEEEEee
Q 004766 598 MLRYHKFTIGHAWVSDFGC-S-EEEEE----FYWLI--------------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTA 657 (732)
Q Consensus 598 ~~~~~~~~~~~~~~~~~g~-p-~~~~~----~~~~~--------------~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g 657 (732)
...... . ..++.. + ..... ++.+. ..+|.....- ...||+||+||
T Consensus 193 ~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~---------~~~~P~li~~G 257 (323)
T 1lzl_A 193 DRLETV-----S-MTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDL---------TGLPPTYLSTM 257 (323)
T ss_dssp TTCCSH-----H-HHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCC---------TTCCCEEEEEE
T ss_pred CCcCch-----h-HHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccCccc---------CCCChhheEEC
Confidence 643211 0 000100 0 01111 11111 1233322111 13489999999
Q ss_pred CCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc--hHHHHHHHHHHHHHHHHHhCCC
Q 004766 658 DHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP--TQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 658 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
++|..+ .++.+++++|+++ |.++++++++++||++... .....+....+.+||.++++..
T Consensus 258 ~~D~~~--~~~~~~~~~l~~~----------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 319 (323)
T 1lzl_A 258 ELDPLR--DEGIEYALRLLQA----------GVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRSL 319 (323)
T ss_dssp TTCTTH--HHHHHHHHHHHHT----------TCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC-
T ss_pred CcCCch--HHHHHHHHHHHHc----------CCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhccC
Confidence 999987 5889999999988 8999999999999986421 1223467778999999998743
No 41
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.86 E-value=3.4e-21 Score=191.32 Aligned_cols=212 Identities=14% Similarity=0.112 Sum_probs=157.0
Q ss_pred EEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhc-
Q 004766 454 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKG- 532 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~- 532 (732)
+.+++.|| .+++++++.|++ ++.|+||++||..+... .|. .+...|+++||.|+++|+||.|+.+..+...
T Consensus 6 ~~~~~~~g-~~l~~~~~~p~~----~~~p~vv~~hG~~~~~~--~~~-~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~ 77 (236)
T 1zi8_A 6 ISIQSYDG-HTFGALVGSPAK----APAPVIVIAQDIFGVNA--FMR-ETVSWLVDQGYAAVCPDLYARQAPGTALDPQD 77 (236)
T ss_dssp CCEECTTS-CEECEEEECCSS----CSEEEEEEECCTTBSCH--HHH-HHHHHHHHTTCEEEEECGGGGTSTTCBCCTTC
T ss_pred EEEecCCC-CeEEEEEECCCC----CCCCEEEEEcCCCCCCH--HHH-HHHHHHHhCCcEEEeccccccCCCcccccccc
Confidence 45778899 999999998874 57899999999876532 232 3455666689999999999988664311000
Q ss_pred ----------ccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc
Q 004766 533 ----------GALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH 602 (732)
Q Consensus 533 ----------~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~ 602 (732)
..........+|+.+++++|.++..++ ++++++|+|+||.+++.++.++| ++++|+..|....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~---- 150 (236)
T 1zi8_A 78 ERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE---- 150 (236)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG----
T ss_pred hhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc----
Confidence 001112334789999999998876544 69999999999999999999988 8888877663211
Q ss_pred cCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCC
Q 004766 603 KFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTS 682 (732)
Q Consensus 603 ~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~ 682 (732)
++...+.+ +.+|+|+++|.+|..||+.++.+++++++..
T Consensus 151 ---------------------------~~~~~~~~----------~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---- 189 (236)
T 1zi8_A 151 ---------------------------KQLNKVPE----------VKHPALFHMGGQDHFVPAPSRQLITEGFGAN---- 189 (236)
T ss_dssp ---------------------------GCGGGGGG----------CCSCEEEEEETTCTTSCHHHHHHHHHHHTTC----
T ss_pred ---------------------------cchhhhhh----------cCCCEEEEecCCCCCCCHHHHHHHHHHHHhC----
Confidence 11122222 5789999999999999999999999998754
Q ss_pred CCCCCCCCCEEEEEeCCCCCCCCCch------HHHHHHHHHHHHHHHHHhCC
Q 004766 683 LENSPQTNPIIGRIERKAGHGVGLPT------QKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~gH~~~~~~------~~~~~~~~~~~~fl~~~l~~ 728 (732)
+ ++++++++++||++.... ....+....+.+||.++|..
T Consensus 190 ------~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 190 ------P-LLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp ------T-TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred ------C-CceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 4 789999999999876432 11245667889999998864
No 42
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.85 E-value=2.7e-20 Score=182.85 Aligned_cols=215 Identities=15% Similarity=0.116 Sum_probs=158.2
Q ss_pred CceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCch
Q 004766 448 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE 527 (732)
Q Consensus 448 ~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~ 527 (732)
.+..+.+.+++ +| .+++++++.|++ +.|+||++||+.+....+.+. .+...|+++||.|+++|+||.|....
T Consensus 9 ~~~~~~~~~~~-~g-~~l~~~~~~p~~-----~~p~vv~~hG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~g~g~s~~ 80 (223)
T 2o2g_A 9 QPQEYAVSVSV-GE-VKLKGNLVIPNG-----ATGIVLFAHGSGSSRYSPRNR-YVAEVLQQAGLATLLIDLLTQEEEEI 80 (223)
T ss_dssp CCCEEEEEEEE-TT-EEEEEEEECCTT-----CCEEEEEECCTTCCTTCHHHH-HHHHHHHHHTCEEEEECSSCHHHHHH
T ss_pred CceeeEEEEec-CC-eEEEEEEecCCC-----CceEEEEecCCCCCCCccchH-HHHHHHHHCCCEEEEEcCCCcCCCCc
Confidence 45677788887 89 999999998864 579999999987665433332 34455666899999999998654322
Q ss_pred hHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCC
Q 004766 528 EWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG 607 (732)
Q Consensus 528 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~ 607 (732)
..........-....+|+.++++++..+..+|+++++++|+|+||.+++.++.++|++++++|+..|..++..
T Consensus 81 ~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~------- 153 (223)
T 2o2g_A 81 DLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLAP------- 153 (223)
T ss_dssp HHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGCT-------
T ss_pred cchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcCH-------
Confidence 2211000011123368899999999998888999999999999999999999999999999999988654310
Q ss_pred CccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCC
Q 004766 608 HAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSP 687 (732)
Q Consensus 608 ~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 687 (732)
..+.+ +.+|+|+++|.+|..||.. ..+.+++.
T Consensus 154 -------------------------~~~~~----------~~~P~l~i~g~~D~~~~~~----~~~~~~~~--------- 185 (223)
T 2o2g_A 154 -------------------------SALPH----------VKAPTLLIVGGYDLPVIAM----NEDALEQL--------- 185 (223)
T ss_dssp -------------------------TTGGG----------CCSCEEEEEETTCHHHHHH----HHHHHHHC---------
T ss_pred -------------------------HHHhc----------CCCCEEEEEccccCCCCHH----HHHHHHhh---------
Confidence 11122 5679999999999988632 23445554
Q ss_pred CCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 688 QTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 688 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
+.++++.+++++||.+..+.. ..+....+.+||.++|.
T Consensus 186 -~~~~~~~~~~~~~H~~~~~~~-~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 186 -QTSKRLVIIPRASHLFEEPGA-LTAVAQLASEWFMHYLR 223 (223)
T ss_dssp -CSSEEEEEETTCCTTCCSTTH-HHHHHHHHHHHHHHHCC
T ss_pred -CCCeEEEEeCCCCcccCChHH-HHHHHHHHHHHHHHhcC
Confidence 567899999999999866443 24667788999998874
No 43
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.85 E-value=7.7e-21 Score=202.42 Aligned_cols=244 Identities=14% Similarity=0.070 Sum_probs=166.4
Q ss_pred CceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCch
Q 004766 448 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE 527 (732)
Q Consensus 448 ~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~ 527 (732)
.+..+.+.+++.|| .+++++++.|++ .+.++.|+||++||+.+.. ..+...+...|+++||.|+++|+||.|+...
T Consensus 65 ~~~~~~~~~~~~~g-~~~~~~~~~p~~-~~~~~~p~vv~~hG~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~ 140 (367)
T 2hdw_A 65 KVEHRKVTFANRYG-ITLAADLYLPKN-RGGDRLPAIVIGGPFGAVK--EQSSGLYAQTMAERGFVTLAFDPSYTGESGG 140 (367)
T ss_dssp TEEEEEEEEECTTS-CEEEEEEEEESS-CCSSCEEEEEEECCTTCCT--TSHHHHHHHHHHHTTCEEEEECCTTSTTSCC
T ss_pred CceeEEEEEecCCC-CEEEEEEEeCCC-CCCCCCCEEEEECCCCCcc--hhhHHHHHHHHHHCCCEEEEECCCCcCCCCC
Confidence 35678899999999 999999999987 3356789999999987653 2333334555666999999999999886432
Q ss_pred hHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc--CC
Q 004766 528 EWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK--FT 605 (732)
Q Consensus 528 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~--~~ 605 (732)
.... ........+|+.+++++|.++..+|++|++++|+|+||.+++.++.++| .++++|+.+|+. +..... ..
T Consensus 141 ~~~~---~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~-~~~~~~~~~~ 215 (367)
T 2hdw_A 141 QPRN---VASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYD-MTRVMSKGYN 215 (367)
T ss_dssp SSSS---CCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCC-HHHHHHHTTT
T ss_pred cCcc---ccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEecccc-ccHHHhhhhc
Confidence 2110 1112346799999999999998888999999999999999999999988 588998888763 211000 00
Q ss_pred ---------------------------------CC---C---cc----cccc----C-CC--------CCHHHHHHHHhc
Q 004766 606 ---------------------------------IG---H---AW----VSDF----G-CS--------EEEEEFYWLIKY 629 (732)
Q Consensus 606 ---------------------------------~~---~---~~----~~~~----g-~p--------~~~~~~~~~~~~ 629 (732)
.. . .. ...| + .| ........+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (367)
T 2hdw_A 216 DSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNM 295 (367)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTS
T ss_pred cccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCC
Confidence 00 0 00 0000 0 00 000112233445
Q ss_pred CcccCCCCCCCCCCCCCCCC-CeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCch
Q 004766 630 SPLHNVRRPWEQNPDKPFQY-PSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT 708 (732)
Q Consensus 630 sp~~~~~~~~~~~~~~~~~~-~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 708 (732)
+|...+.+ +. +|+|++||.+|. ++.++.+++++ . +.++++++++++||......
T Consensus 296 ~~~~~~~~----------i~~~PvLii~G~~D~--~~~~~~~~~~~---~----------~~~~~~~~~~g~gH~~~~~~ 350 (367)
T 2hdw_A 296 PILTYIKE----------ISPRPILLIHGERAH--SRYFSETAYAA---A----------AEPKELLIVPGASHVDLYDR 350 (367)
T ss_dssp CSCTTGGG----------GTTSCEEEEEETTCT--THHHHHHHHHH---S----------CSSEEEEEETTCCTTHHHHC
T ss_pred ChhHhHHh----------hcCCceEEEecCCCC--CHHHHHHHHHh---C----------CCCeeEEEeCCCCeeeeecC
Confidence 56555554 67 899999999998 77777777765 3 67899999999999843211
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 004766 709 QKMIDEAADRYGFMAKML 726 (732)
Q Consensus 709 ~~~~~~~~~~~~fl~~~l 726 (732)
.. ......+.+||.++|
T Consensus 351 ~~-~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 351 LD-RIPFDRIAGFFDEHL 367 (367)
T ss_dssp TT-TSCHHHHHHHHHHHC
T ss_pred ch-hHHHHHHHHHHHhhC
Confidence 11 114567889998875
No 44
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.85 E-value=2e-20 Score=194.70 Aligned_cols=236 Identities=14% Similarity=0.128 Sum_probs=165.2
Q ss_pred CceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC-CCcChhHHHHHHh-cCcEEEEEcccCCCCC
Q 004766 448 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRH-LGAVFCIANIRGGGEY 525 (732)
Q Consensus 448 ~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~-~~~~~~~~~~l~~-~G~~v~~~~~rG~g~~ 525 (732)
....+.+.+++.+| +|++.++.|++ .++.|+||++|||...... ..|.. +...|++ .||.|+++|+||.|+.
T Consensus 48 ~~~~~~~~i~~~~g--~~~~~~~~P~~---~~~~p~vv~~HGgg~~~g~~~~~~~-~~~~la~~~g~~v~~~d~rg~g~~ 121 (313)
T 2wir_A 48 IHRVEDITIPGRGG--PIRARVYRPRD---GERLPAVVYYHGGGFVLGSVETHDH-VCRRLANLSGAVVVSVDYRLAPEH 121 (313)
T ss_dssp CSEEEEEEEEETTE--EEEEEEEECSC---CSSEEEEEEECCSTTTSCCTGGGHH-HHHHHHHHHCCEEEEEECCCTTTS
T ss_pred CceEEEEEeeCCCC--cEEEEEEecCC---CCCccEEEEECCCcccCCChHHHHH-HHHHHHHHcCCEEEEeecCCCCCC
Confidence 34678888988776 89999999976 2567999999998622222 23333 3344443 5999999999998864
Q ss_pred chhHHhcccccCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhhCCCe----eeEEEEcCCcccc
Q 004766 526 GEEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRPDL----FGCALAHVGVMDM 598 (732)
Q Consensus 526 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p~~----f~a~v~~~p~~d~ 598 (732)
. .....+|+.++++||.+.. .+|++||+++|+|+||.+++.++.++|+. ++++|+.+|++|+
T Consensus 122 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 190 (313)
T 2wir_A 122 K-----------FPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQVLIYPAVNL 190 (313)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCC
T ss_pred C-----------CCchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEEEEcCccCC
Confidence 2 2345789999999998752 25788999999999999999999988876 9999999999884
Q ss_pred cccccCCCCCccccccC----CCCCHHHHHHH-H------------hcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCC
Q 004766 599 LRYHKFTIGHAWVSDFG----CSEEEEEFYWL-I------------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDD 661 (732)
Q Consensus 599 ~~~~~~~~~~~~~~~~g----~p~~~~~~~~~-~------------~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~ 661 (732)
...... .+ ..+. .........++ . ..+|+...- ...||+||+||.+|.
T Consensus 191 ~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~----------~~~~P~lii~G~~D~ 255 (313)
T 2wir_A 191 TGSPTV----SR-VEYSGPEYVILTADLMAWFGRQYFSKPQDALSPYASPIFADL----------SNLPPALVITAEYDP 255 (313)
T ss_dssp SSCCCH----HH-HHTCSGGGCSSCHHHHHHHHHHHCSSGGGGGSTTTCGGGSCC----------TTCCCEEEEEEEECT
T ss_pred CCCCCc----CH-HHhcccCCCccCHHHHHHHHHHhCCCCCccCCCccCcCcccc----------cCCCcceEEEcCcCc
Confidence 322110 00 0010 00111111111 1 124542111 245899999999999
Q ss_pred CCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc---hHHHHHHHHHHHHHHHHHhC
Q 004766 662 RVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 662 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~ 727 (732)
.+ .++.+++++|+++ |.+++++++++++|++... ..+..+....+.+||.++++
T Consensus 256 ~~--~~~~~~~~~l~~~----------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 256 LR--DEGELYAHLLKTR----------GVRAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp TH--HHHHHHHHHHHHT----------TCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred Ch--HHHHHHHHHHHHC----------CCCEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 87 4788999999988 8999999999999997521 12335677788999988764
No 45
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.85 E-value=4e-20 Score=192.23 Aligned_cols=240 Identities=17% Similarity=0.137 Sum_probs=164.2
Q ss_pred CceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccC-CCCcChhHHHHHHhc-CcEEEEEcccCCCCC
Q 004766 448 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSFSVSRTILMRHL-GAVFCIANIRGGGEY 525 (732)
Q Consensus 448 ~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~-~~~~~~~~~~~l~~~-G~~v~~~~~rG~g~~ 525 (732)
...++.+.+++.+| +|++.+++|++. ++.|+||++||+..... ...|. .+...|+++ ||.|+++|+||.|+.
T Consensus 45 ~~~~~~~~i~~~~g--~i~~~~~~p~~~---~~~p~vv~~HGgg~~~g~~~~~~-~~~~~la~~~g~~v~~~d~rg~g~~ 118 (311)
T 2c7b_A 45 IAETRDVHIPVSGG--SIRARVYFPKKA---AGLPAVLYYHGGGFVFGSIETHD-HICRRLSRLSDSVVVSVDYRLAPEY 118 (311)
T ss_dssp CSEEEEEEEEETTE--EEEEEEEESSSC---SSEEEEEEECCSTTTSCCTGGGH-HHHHHHHHHHTCEEEEECCCCTTTS
T ss_pred cceEEEEEecCCCC--cEEEEEEecCCC---CCCcEEEEECCCcccCCChhhhH-HHHHHHHHhcCCEEEEecCCCCCCC
Confidence 44678888988776 899999999762 45799999999862211 22333 334445534 999999999998864
Q ss_pred chhHHhcccccCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhhCCC----eeeEEEEcCCcccc
Q 004766 526 GEEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRPD----LFGCALAHVGVMDM 598 (732)
Q Consensus 526 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p~----~f~a~v~~~p~~d~ 598 (732)
. .....+|+.++++|+.+.. .+|++||+++|+|+||++++.++.++|+ +++++|+.+|+.++
T Consensus 119 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 187 (311)
T 2c7b_A 119 K-----------FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNM 187 (311)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCC
T ss_pred C-----------CCccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCC
Confidence 2 2345789999999998762 3578899999999999999999987776 59999999999884
Q ss_pred cccccCCCCCccccccCC-CCCHHHHHHH-------------HhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCC
Q 004766 599 LRYHKFTIGHAWVSDFGC-SEEEEEFYWL-------------IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVV 664 (732)
Q Consensus 599 ~~~~~~~~~~~~~~~~g~-p~~~~~~~~~-------------~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~ 664 (732)
........ ..+ ..+.. +.......++ ...+|+...-. ..||+||+||++|..++
T Consensus 188 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~----------~~~P~lii~G~~D~~~~ 255 (311)
T 2c7b_A 188 TGVPTASL-VEF-GVAETTSLPIELMVWFGRQYLKRPEEAYDFKASPLLADLG----------GLPPALVVTAEYDPLRD 255 (311)
T ss_dssp SSCCCHHH-HHH-HHCTTCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCT----------TCCCEEEEEETTCTTHH
T ss_pred ccccccCC-ccH-HHhccCCCCHHHHHHHHHHhCCCCccccCcccCccccccc----------CCCcceEEEcCCCCchH
Confidence 21110000 000 00000 0001111110 12344433111 34699999999999885
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc---hHHHHHHHHHHHHHHHHHhCC
Q 004766 665 PLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 665 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~ 728 (732)
++..++++|+.. +.+++++++++++|++... ..+..+....+.+||.++++.
T Consensus 256 --~~~~~~~~l~~~----------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 310 (311)
T 2c7b_A 256 --EGELYAYKMKAS----------GSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQP 310 (311)
T ss_dssp --HHHHHHHHHHHT----------TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTCC
T ss_pred --HHHHHHHHHHHC----------CCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhcC
Confidence 677888999887 8899999999999998521 122356777889999998864
No 46
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.85 E-value=1.4e-19 Score=181.51 Aligned_cols=209 Identities=15% Similarity=0.095 Sum_probs=159.5
Q ss_pred EEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCC--CcChhHHHHHHhcCcEEEEEcccCCCCCchhHH
Q 004766 453 QVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP--SFSVSRTILMRHLGAVFCIANIRGGGEYGEEWH 530 (732)
Q Consensus 453 ~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~--~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~ 530 (732)
.+.+++.+| +|.++++.|++ ++.|+||++||..+..... .....+...|+++||.|+++|+||.|.....+
T Consensus 25 ~~~~~~~~g--~l~~~~~~p~~----~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~- 97 (249)
T 2i3d_A 25 EVIFNGPAG--RLEGRYQPSKE----KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEF- 97 (249)
T ss_dssp EEEEEETTE--EEEEEEECCSS----TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCC-
T ss_pred EEEEECCCc--eEEEEEEcCCC----CCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC-
Confidence 888988777 79999887754 5679999999964322111 11123455666699999999999987643221
Q ss_pred hcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCcc
Q 004766 531 KGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAW 610 (732)
Q Consensus 531 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~ 610 (732)
......++|+.+++++|.+++. ++++++++|+|+||++++.++.++|+ ++++|+..|..+...
T Consensus 98 -----~~~~~~~~d~~~~i~~l~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~---------- 160 (249)
T 2i3d_A 98 -----DHGAGELSDAASALDWVQSLHP-DSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD---------- 160 (249)
T ss_dssp -----CSSHHHHHHHHHHHHHHHHHCT-TCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC----------
T ss_pred -----CCccchHHHHHHHHHHHHHhCC-CCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh----------
Confidence 1223456999999999998854 77899999999999999999999998 999999988765311
Q ss_pred ccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCC
Q 004766 611 VSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTN 690 (732)
Q Consensus 611 ~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 690 (732)
...+.. +..|+|+++|.+|..||+.++.++++++... .+.
T Consensus 161 ---------------------~~~~~~----------~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~---------~~~ 200 (249)
T 2i3d_A 161 ---------------------FSFLAP----------CPSSGLIINGDADKVAPEKDVNGLVEKLKTQ---------KGI 200 (249)
T ss_dssp ---------------------CTTCTT----------CCSCEEEEEETTCSSSCHHHHHHHHHHHTTS---------TTC
T ss_pred ---------------------hhhhcc----------cCCCEEEEEcCCCCCCCHHHHHHHHHHHhhc---------cCC
Confidence 111222 6789999999999999999999999998752 156
Q ss_pred CEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 691 PIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 691 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
.+++++++++||.+.. . ..+....+.+||.+++..
T Consensus 201 ~~~~~~~~g~~H~~~~-~--~~~~~~~i~~fl~~~l~~ 235 (249)
T 2i3d_A 201 LITHRTLPGANHFFNG-K--VDELMGECEDYLDRRLNG 235 (249)
T ss_dssp CEEEEEETTCCTTCTT-C--HHHHHHHHHHHHHHHHTT
T ss_pred ceeEEEECCCCccccc-C--HHHHHHHHHHHHHHhcCC
Confidence 8999999999999863 2 235667789999998864
No 47
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.85 E-value=3.2e-20 Score=193.90 Aligned_cols=232 Identities=15% Similarity=0.073 Sum_probs=157.9
Q ss_pred CceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccE-EEEEcCCCCccCC-CCcChhHHHHHHhcCcEEEEEcccCCCCC
Q 004766 448 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPC-LLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGGEY 525 (732)
Q Consensus 448 ~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~-vv~~hG~~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~g~~ 525 (732)
....+.+.+ +| +.+ ++|++. ++.|+ ||++|||...... ..|......++...||+|+++|+|++++.
T Consensus 57 ~~~~~~~~~---~g-~~~----~~p~~~---~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~ 125 (322)
T 3k6k_A 57 GVELTLTDL---GG-VPC----IRQATD---GAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPEN 125 (322)
T ss_dssp TCEEEEEEE---TT-EEE----EEEECT---TCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTS
T ss_pred CceEEEEEE---CC-EeE----EecCCC---CCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCC
Confidence 445555544 67 666 466652 34445 9999998532222 22333234444435999999999998753
Q ss_pred chhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCe----eeEEEEcCCccccccc
Q 004766 526 GEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL----FGCALAHVGVMDMLRY 601 (732)
Q Consensus 526 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~----f~a~v~~~p~~d~~~~ 601 (732)
. ....++|+.++++||.++ .+|+++|+|+|+|+||.+++.++.+.|+. ++++|+.+|++|+...
T Consensus 126 ~-----------~~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~ 193 (322)
T 3k6k_A 126 P-----------FPAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLS 193 (322)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCC
T ss_pred C-----------CchHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccC
Confidence 2 345689999999999988 45899999999999999999999887765 9999999999886432
Q ss_pred ccCCCCCcccccc-CCC-CCHHHHHHH------------HhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchH
Q 004766 602 HKFTIGHAWVSDF-GCS-EEEEEFYWL------------IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH 667 (732)
Q Consensus 602 ~~~~~~~~~~~~~-g~p-~~~~~~~~~------------~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~ 667 (732)
... +.... ..+ ........+ ...||+..... ..||+||+||++|.. ..+
T Consensus 194 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~----------~~pP~li~~G~~D~~--~~~ 256 (322)
T 3k6k_A 194 RWS-----NSNLADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLS----------GLPEMLIHVGSEEAL--LSD 256 (322)
T ss_dssp SHH-----HHHTGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCT----------TCCCEEEEEESSCTT--HHH
T ss_pred ccc-----hhhccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCccccccc----------CCCcEEEEECCcCcc--HHH
Confidence 110 00000 000 111111111 11355544332 568999999999986 468
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc---hHHHHHHHHHHHHHHHHHhCCC
Q 004766 668 SLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 668 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
+.+++++|+++ |++++++++++++|++... ..+..+....+.+||.++|+..
T Consensus 257 ~~~~~~~l~~~----------g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3k6k_A 257 STTLAERAGAA----------GVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISKL 311 (322)
T ss_dssp HHHHHHHHHHT----------TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHC----------CCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhcc
Confidence 99999999998 9999999999999997531 1233567788999999998754
No 48
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.85 E-value=8.4e-21 Score=195.01 Aligned_cols=234 Identities=14% Similarity=0.145 Sum_probs=165.1
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhH
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 529 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~ 529 (732)
..+.+.+++ +| .+|.++++.|+ +.|+||++||+.+... .|. .+...|.++||.|+++|+||.|+.....
T Consensus 5 ~~~~~~~~~-~g-~~l~~~~~~p~------~~p~vv~~HG~~~~~~--~~~-~~~~~l~~~g~~v~~~d~~G~g~s~~~~ 73 (290)
T 3ksr_A 5 KLSSIEIPV-GQ-DELSGTLLTPT------GMPGVLFVHGWGGSQH--HSL-VRAREAVGLGCICMTFDLRGHEGYASMR 73 (290)
T ss_dssp EEEEEEEEE-TT-EEEEEEEEEEE------SEEEEEEECCTTCCTT--TTH-HHHHHHHTTTCEEECCCCTTSGGGGGGT
T ss_pred ceeeEEecC-CC-eEEEEEEecCC------CCcEEEEeCCCCCCcC--cHH-HHHHHHHHCCCEEEEeecCCCCCCCCCc
Confidence 456677776 88 99999999986 5799999999887543 333 3456677689999999999988654432
Q ss_pred HhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCC---
Q 004766 530 HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTI--- 606 (732)
Q Consensus 530 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~--- 606 (732)
.. .......+|+.+++++|.++..+|+++|+++|+|+||++++.++.++| .+++++.+|............
T Consensus 74 ~~----~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~~~ 147 (290)
T 3ksr_A 74 QS----VTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKVSL 147 (290)
T ss_dssp TT----CBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHHHH
T ss_pred cc----ccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhcccccc
Confidence 11 111334689999999999988888999999999999999999999988 677777777664332111000
Q ss_pred --CCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCC
Q 004766 607 --GHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLE 684 (732)
Q Consensus 607 --~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~ 684 (732)
...+...+..+.... ..++...+.+ +.+|+|++||.+|..|++.++.++++.++..
T Consensus 148 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~----------~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~------ 205 (290)
T 3ksr_A 148 NADPDLMDYRRRALAPG------DNLALAACAQ----------YKGDVLLVEAENDVIVPHPVMRNYADAFTNA------ 205 (290)
T ss_dssp HHSTTHHHHTTSCCCGG------GCHHHHHHHH----------CCSEEEEEEETTCSSSCHHHHHHHHHHTTTS------
T ss_pred cCChhhhhhhhhhhhhc------cccHHHHHHh----------cCCCeEEEEecCCcccChHHHHHHHHHhccC------
Confidence 000000011111100 0011111222 6779999999999999999999999988764
Q ss_pred CCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 685 NSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 685 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
+ ++++++++++||.+...... ......+.+||.++++.
T Consensus 206 ----~-~~~~~~~~~~gH~~~~~~~~-~~~~~~i~~fl~~~~~~ 243 (290)
T 3ksr_A 206 ----R-SLTSRVIAGADHALSVKEHQ-QEYTRALIDWLTEMVVG 243 (290)
T ss_dssp ----S-EEEEEEETTCCTTCCSHHHH-HHHHHHHHHHHHHHHHT
T ss_pred ----C-CceEEEcCCCCCCCCcchHH-HHHHHHHHHHHHHHhcC
Confidence 3 78999999999988665432 46667889999998754
No 49
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.85 E-value=1.7e-21 Score=199.70 Aligned_cols=247 Identities=10% Similarity=0.065 Sum_probs=160.2
Q ss_pred eEEEEEEEc-cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEccc--CCCC--
Q 004766 450 HVHQVFVPS-KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIR--GGGE-- 524 (732)
Q Consensus 450 ~~~~~~~~s-~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~r--G~g~-- 524 (732)
..+.+.+.| .+| .++++.++.|++.. +++.|+||++||+.+.............+++++|++|+++|.+ |.+.
T Consensus 21 ~~~~~~~~s~~~~-~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~ 98 (283)
T 4b6g_A 21 SQQVWAHHAQTLQ-CEMKFAVYLPNNPE-NRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPN 98 (283)
T ss_dssp EEEEEEEEETTTT-EEEEEEEEECCCTT-CCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCC
T ss_pred cEEEEEEechhhC-CceEEEEEeCCCCC-CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccccc
Confidence 344555544 478 99999999999864 5789999999998765432211112346677789999999964 4332
Q ss_pred -------CchhHHhcccccC--CccHHHHH-HHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 525 -------YGEEWHKGGALAK--KQNCFDDF-ISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 525 -------~g~~~~~~~~~~~--~~~~~~D~-~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
.|..|+....... ....+.++ ...+..+++..+.+++|++|+|+|+||++++.++.++|++|+++++.+|
T Consensus 99 ~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~ 178 (283)
T 4b6g_A 99 DDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSP 178 (283)
T ss_dssp CSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESC
T ss_pred cccccccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECC
Confidence 2222222211110 01122332 3233333333344578999999999999999999999999999999999
Q ss_pred cccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCc-hHHHHHHH
Q 004766 595 VMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVP-LHSLKLLA 673 (732)
Q Consensus 595 ~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~-~~~~~~~~ 673 (732)
++++..... .. ..+...+|.. ... +..++|...++.. ...+|+||+||+.|..|+. .++.++++
T Consensus 179 ~~~~~~~~~-~~-~~~~~~~g~~--~~~---~~~~~~~~~~~~~--------~~~~p~li~~G~~D~~~~~~~~~~~~~~ 243 (283)
T 4b6g_A 179 ILSPSLVPW-GE-KAFTAYLGKD--REK---WQQYDANSLIQQG--------YKVQGMRIDQGLEDEFLPTQLRTEDFIE 243 (283)
T ss_dssp CCCGGGSHH-HH-HHHHHHHCSC--GGG---GGGGCHHHHHHHT--------CCCSCCEEEEETTCTTHHHHTCHHHHHH
T ss_pred ccccccCcc-hh-hhHHhhcCCc--hHH---HHhcCHHHHHHhc--------ccCCCEEEEecCCCccCcchhhHHHHHH
Confidence 887643110 00 0011122321 111 1234555444432 2457999999999999987 33899999
Q ss_pred HHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 674 TMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 674 ~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
+|+++ |.+++++++++++|.+.. ........+.|+.++|.
T Consensus 244 ~l~~~----------g~~~~~~~~~g~~H~~~~----~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 244 TCRAA----------NQPVDVRFHKGYDHSYYF----IASFIGEHIAYHAAFLK 283 (283)
T ss_dssp HHHHH----------TCCCEEEEETTCCSSHHH----HHHHHHHHHHHHHTTCC
T ss_pred HHHHc----------CCCceEEEeCCCCcCHhH----HHHHHHHHHHHHHHhcC
Confidence 99998 899999999999998632 23456678889888763
No 50
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.84 E-value=1.1e-20 Score=195.58 Aligned_cols=215 Identities=12% Similarity=0.102 Sum_probs=153.2
Q ss_pred EEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHH
Q 004766 451 VHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWH 530 (732)
Q Consensus 451 ~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~ 530 (732)
...+.|. + ..+++.++.|++. .++.|+||++|||............+...|+++||+|+++|+||.++..
T Consensus 58 ~~~i~y~---~-~~~~~~~~~p~~~--~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~---- 127 (303)
T 4e15_A 58 VDHLRYG---E-GRQLVDVFYSEKT--TNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVT---- 127 (303)
T ss_dssp EEEEECS---S-TTCEEEEEECTTC--CTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSC----
T ss_pred eeeeccC---C-CCcEEEEEecCCC--CCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCC----
Confidence 3445554 4 4567788888753 4688999999998644333222222345555699999999999987642
Q ss_pred hcccccCCccHHHHHHHHHHHHHHc-CCCCCCcEEEEecChhHHHHHHHHhhCC-------CeeeEEEEcCCcccccccc
Q 004766 531 KGGALAKKQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACINQRP-------DLFGCALAHVGVMDMLRYH 602 (732)
Q Consensus 531 ~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p-------~~f~a~v~~~p~~d~~~~~ 602 (732)
.....+|+.++++||.+. ...+++||+|+|+|+||++++.++.+.+ +.++++|+.+|+.|+....
T Consensus 128 -------~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~ 200 (303)
T 4e15_A 128 -------LEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELS 200 (303)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHH
T ss_pred -------hhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhh
Confidence 123578999999999873 2345889999999999999999988644 3799999999999875543
Q ss_pred cCCCCCccccccCCCCCHHHHHHHHhcCcc-cCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcC
Q 004766 603 KFTIGHAWVSDFGCSEEEEEFYWLIKYSPL-HNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCT 681 (732)
Q Consensus 603 ~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~-~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~ 681 (732)
.... ......++.... .+...||+ ..+.... ..+.+|+||+||.+|..||+.++.+++++|+++
T Consensus 201 ~~~~-~~~~~~~~~~~~-----~~~~~sp~~~~~~~~~------~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~--- 265 (303)
T 4e15_A 201 NLES-VNPKNILGLNER-----NIESVSPMLWEYTDVT------VWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKK--- 265 (303)
T ss_dssp TCTT-TSGGGTTCCCTT-----TTTTTCGGGCCCCCGG------GGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHH---
T ss_pred cccc-cchhhhhcCCHH-----HHHHcCchhhcccccc------cCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHC---
Confidence 3110 111122332211 13456787 4554300 013899999999999999999999999999998
Q ss_pred CCCCCCCCCCEEEEEeCCCCCCC
Q 004766 682 SLENSPQTNPIIGRIERKAGHGV 704 (732)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~gH~~ 704 (732)
|.++++++++++||+.
T Consensus 266 -------g~~~~~~~~~g~~H~~ 281 (303)
T 4e15_A 266 -------GYKASFTLFKGYDHFD 281 (303)
T ss_dssp -------TCCEEEEEEEEEETTH
T ss_pred -------CCceEEEEeCCCCchH
Confidence 8999999999999953
No 51
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.84 E-value=2.7e-18 Score=181.08 Aligned_cols=301 Identities=10% Similarity=0.070 Sum_probs=194.7
Q ss_pred HHhhcCCCCCCCcEEeCCEEEEEEEcC----CCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEE
Q 004766 74 ITKLFDSPRYDAPFKRGNKYFYFHNTG----LQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYA 149 (732)
Q Consensus 74 ~~~~~~~~~~~~p~~~g~~~~~~~~~~----~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~ 149 (732)
+++++..+.++.|..+|.+++|..... ......||+.+..+++.+.| . .+..++|||||++|||+
T Consensus 8 ~~~l~~~~~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l---~--------~~~~~~~SpDg~~la~~ 76 (347)
T 2gop_A 8 EKTFAKFAYLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI---E--------NATMPRISPDGKKIAFM 76 (347)
T ss_dssp --CCCCSCEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE---E--------SCEEEEECTTSSEEEEE
T ss_pred cccceeeEEcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc---c--------cCCCeEECCCCCEEEEE
Confidence 345555566666666888888876432 22256789888666655554 1 13478999999999999
Q ss_pred EeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCC-------CCCC-CCCcccCCcccEEE
Q 004766 150 LSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEG-------KDMD-AGTETDSNLYHEFY 221 (732)
Q Consensus 150 ~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~-------~~~~-~~~~~~~~~~~~v~ 221 (732)
....+....+||++|+++|+....+.... ...++|||||+.|+|++.+.+... ..+. .+.........+||
T Consensus 77 ~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (347)
T 2gop_A 77 RANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFW 155 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEE
T ss_pred EeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEE
Confidence 87765556799999999988554332222 578999999999999975421100 0000 00000001245799
Q ss_pred EEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCc----c-eEEEEEEeCCCCCCCcccccccCCCCCcE
Q 004766 222 YHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCD----P-VNKVYYCDLSALPEGLEGFKKRDGLLPFV 296 (732)
Q Consensus 222 ~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~----~-~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 296 (732)
++++.++... ..+.. + ....+.||||| +++....... . ..+||+++ ++. .+
T Consensus 156 ~~d~~~~~~~-~~l~~-~----~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~--------------~~ 211 (347)
T 2gop_A 156 IFDTESEEVI-EEFEK-P----RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGK--------------EE 211 (347)
T ss_dssp EEETTTTEEE-EEEEE-E----TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTE--------------EE
T ss_pred EEECCCCeEE-eeecC-C----CcccccCCCCe--EEEEEecccccccccccccEEEeC--CCc--------------eE
Confidence 9999876430 12222 2 22468999999 6666543321 2 56899999 422 34
Q ss_pred EeeecccceEEEEEecCCeEEEEeCCCC----CCceEEEEeCCCCCCceEeccCCCCCceeE-EEEecCCEEEEEEecCC
Q 004766 297 KLIDGFDAQYEVIANDDTVFTFLTNKDA----PKYKIIRVDLKEPNDWFEVIPEAERDVLES-ATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 297 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~----~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~-~~~~~~~~l~~~~~~~g 371 (732)
.+..+ . ....++|||+.|++.++... ...+|+.+| ++. .+.+++.. +..+.. +.|+ ++ +++....++
T Consensus 212 ~l~~~-~-~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~~-~~~~~~~~~~s-dg-~~~~~~~~~ 283 (347)
T 2gop_A 212 KMFEK-V-SFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKE-VMGILDEV-DRGVGQAKIKD-GK-VYFTLFEEG 283 (347)
T ss_dssp EEEEE-E-SEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSC-EEESSTTC-CSEEEEEEEET-TE-EEEEEEETT
T ss_pred EeccC-c-ceeeECCCCCEEEEEEccccCCccccceEEEEC--CCc-eEeccccC-CcccCCccEEc-Cc-EEEEEecCC
Confidence 44444 2 23335999999999886532 356899999 444 46666543 345665 7777 56 888888888
Q ss_pred eeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEE
Q 004766 372 KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCN 425 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d 425 (732)
..+|+ ++ . |+. ..+....+.+..+++++ .++++.++..+|.++|.+|
T Consensus 284 ~~~l~-~~-~-g~~-~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 284 SVNLY-IW-D-GEI-KPIAKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEE-EE-S-SSE-EEEECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred cEEEE-Ec-C-Cce-EEEecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 88888 87 4 765 44443466777788777 5888899999999999998
No 52
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.84 E-value=1.5e-19 Score=191.93 Aligned_cols=246 Identities=15% Similarity=0.124 Sum_probs=164.7
Q ss_pred CceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCC---CcChhHHHHHHhcCcEEEEEcccCCCC
Q 004766 448 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP---SFSVSRTILMRHLGAVFCIANIRGGGE 524 (732)
Q Consensus 448 ~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~---~~~~~~~~~l~~~G~~v~~~~~rG~g~ 524 (732)
.+..+.+.+.+.+| ..+.+.++.|++. .++.|+||++|||....... .|.. +...|+++||+|+.+|+||+|+
T Consensus 79 ~~~~~~~~~~~~~g-~~l~~~v~~p~~~--~~~~p~vv~iHGgg~~~g~~~~~~~~~-~~~~la~~g~~vv~~d~r~~gg 154 (361)
T 1jkm_A 79 DVETSTETILGVDG-NEITLHVFRPAGV--EGVLPGLVYTHGGGMTILTTDNRVHRR-WCTDLAAAGSVVVMVDFRNAWT 154 (361)
T ss_dssp CEEEEEEEEECTTS-CEEEEEEEEETTC--CSCEEEEEEECCSTTTSSCSSSHHHHH-HHHHHHHTTCEEEEEECCCSEE
T ss_pred CceeeeeeeecCCC-CeEEEEEEeCCCC--CCCCeEEEEEcCCccccCCCcccchhH-HHHHHHhCCCEEEEEecCCCCC
Confidence 35667788888899 8999999999863 23789999999986222222 2332 3344555999999999999874
Q ss_pred CchhHHhcccccCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhh-----CCCeeeEEEEcCCcc
Q 004766 525 YGEEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQ-----RPDLFGCALAHVGVM 596 (732)
Q Consensus 525 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~-----~p~~f~a~v~~~p~~ 596 (732)
+. ........+.|+.++++|+.++- ..| +|+|+|+|+||.+++.++.+ .|++++++|+.+|+.
T Consensus 155 ~~-------~~~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~ 225 (361)
T 1jkm_A 155 AE-------GHHPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYI 225 (361)
T ss_dssp TT-------EECCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCC
T ss_pred CC-------CCCCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcc
Confidence 42 11233456899999999998762 233 99999999999999999988 788999999999998
Q ss_pred ccccccc----CCCCCccccccCCC-CCHHHHHHH-H------------hcCcccCCCCCCCCCCCCCCCCCeEEEEeeC
Q 004766 597 DMLRYHK----FTIGHAWVSDFGCS-EEEEEFYWL-I------------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD 658 (732)
Q Consensus 597 d~~~~~~----~~~~~~~~~~~g~p-~~~~~~~~~-~------------~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~ 658 (732)
+...... ......+ .++..+ ........+ . ..+|+....... ...+|+||+||+
T Consensus 226 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l-------~~l~P~Lii~G~ 297 (361)
T 1jkm_A 226 SGGYAWDHERRLTELPSL-VENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDEL-------RGLPPFVVAVNE 297 (361)
T ss_dssp CCCTTSCHHHHHHHCTHH-HHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHH-------TTCCCEEEEEET
T ss_pred ccccccccccccccCcch-hhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhH-------cCCCceEEEEcC
Confidence 8721100 0000000 001001 111111111 1 123331100000 123599999999
Q ss_pred CCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCC-Cc---hHHH-HHHHHHHHHHHHHHh
Q 004766 659 HDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVG-LP---TQKM-IDEAADRYGFMAKML 726 (732)
Q Consensus 659 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~---~~~~-~~~~~~~~~fl~~~l 726 (732)
+|..++ ++.+++++|+++ +.++++++++++||++. .. ..+. .+....+.+||.++.
T Consensus 298 ~D~~~~--~~~~~~~~l~~~----------g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 298 LDPLRD--EGIAFARRLARA----------GVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp TCTTHH--HHHHHHHHHHHT----------TCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcchh--hHHHHHHHHHHc----------CCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 999988 899999999987 88999999999999876 21 1222 456678889998764
No 53
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.83 E-value=5.4e-20 Score=184.81 Aligned_cols=236 Identities=13% Similarity=0.103 Sum_probs=156.3
Q ss_pred EEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcc
Q 004766 454 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGG 533 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~ 533 (732)
+.++ .|| .+|.++++.|++. .++.|+||++||..+......|.. +...|.++||.|+++|+||.|........
T Consensus 4 ~~~~-~~g-~~l~~~~~~p~~~--~~~~p~vvl~HG~~~~~~~~~~~~-~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-- 76 (251)
T 2wtm_A 4 MYID-CDG-IKLNAYLDMPKNN--PEKCPLCIIIHGFTGHSEERHIVA-VQETLNEIGVATLRADMYGHGKSDGKFED-- 76 (251)
T ss_dssp EEEE-ETT-EEEEEEEECCTTC--CSSEEEEEEECCTTCCTTSHHHHH-HHHHHHHTTCEEEEECCTTSTTSSSCGGG--
T ss_pred eEEe-cCC-cEEEEEEEccCCC--CCCCCEEEEEcCCCcccccccHHH-HHHHHHHCCCEEEEecCCCCCCCCCcccc--
Confidence 4454 489 9999999988752 256799999999876632223333 34556658999999999999865432111
Q ss_pred cccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc--------C-
Q 004766 534 ALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK--------F- 604 (732)
Q Consensus 534 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~--------~- 604 (732)
..-....+|+.+++++|.+...+ +++.++|+|+||.+++.++.++|++++++|+..|...+..... +
T Consensus 77 --~~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 152 (251)
T 2wtm_A 77 --HTLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFD 152 (251)
T ss_dssp --CCHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETTEECB
T ss_pred --CCHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhccccCC
Confidence 01122367888888988765433 4899999999999999999999999999999988754321100 0
Q ss_pred -CCCCccccccCC-CCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCC
Q 004766 605 -TIGHAWVSDFGC-SEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTS 682 (732)
Q Consensus 605 -~~~~~~~~~~g~-p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~ 682 (732)
.........+.. ......+..+..+++...+.+ +..|+|++||++|..||+..+.++++.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------i~~P~lii~G~~D~~v~~~~~~~~~~~~~------ 216 (251)
T 2wtm_A 153 PENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDK----------YTKPVLIVHGDQDEAVPYEASVAFSKQYK------ 216 (251)
T ss_dssp TTBCCSEEEETTTEEEETHHHHHHTTCCHHHHHHH----------CCSCEEEEEETTCSSSCHHHHHHHHHHSS------
T ss_pred chhcchHHhhhhccccchHHHHHHHccCHHHHHHh----------cCCCEEEEEeCCCCCcChHHHHHHHHhCC------
Confidence 000000001111 011122222223333333333 67899999999999999999888766542
Q ss_pred CCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 683 LENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
..++++++++||.. ... ..+....+.+||.+++.
T Consensus 217 --------~~~~~~~~~~gH~~-~~~--~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 217 --------NCKLVTIPGDTHCY-DHH--LELVTEAVKEFMLEQIA 250 (251)
T ss_dssp --------SEEEEEETTCCTTC-TTT--HHHHHHHHHHHHHHHHC
T ss_pred --------CcEEEEECCCCccc-chh--HHHHHHHHHHHHHHhcc
Confidence 36889999999998 433 24567788999988764
No 54
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.83 E-value=6e-19 Score=179.08 Aligned_cols=220 Identities=12% Similarity=-0.029 Sum_probs=153.5
Q ss_pred eEEEEEEEcc-CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcC----hhHHHHHHhc----CcEEEEEccc
Q 004766 450 HVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFS----VSRTILMRHL----GAVFCIANIR 520 (732)
Q Consensus 450 ~~~~~~~~s~-dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~----~~~~~~l~~~----G~~v~~~~~r 520 (732)
.++++.+.+. +| ..+++.++.|+++...++.|+||++||+.+....+... ..+...|.++ ||+|+.+|+|
T Consensus 31 ~~~~~~~~s~~~~-~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~ 109 (268)
T 1jjf_A 31 QVVNISYFSTATN-STRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTN 109 (268)
T ss_dssp EEEEEEEEETTTT-EEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCC
T ss_pred eEEEEEEeccccC-CceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCC
Confidence 5667777764 67 89999999999875567899999999987654332211 1123334435 5999999999
Q ss_pred CCCCC-chhHHhcccccCCccHHHH-HHHHHHHHHHcCCC--CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 521 GGGEY-GEEWHKGGALAKKQNCFDD-FISASEYLISAGYT--QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 521 G~g~~-g~~~~~~~~~~~~~~~~~D-~~~~~~~l~~~~~~--d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
+.+.. ...|. ...+| +.++++++.++.-+ |++|++|+|+|+||++++.++.++|++|+++|+.+|..
T Consensus 110 ~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~ 180 (268)
T 1jjf_A 110 AAGPGIADGYE---------NFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 180 (268)
T ss_dssp CCCTTCSCHHH---------HHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred CCCccccccHH---------HHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCC
Confidence 86531 11111 11233 34556666654333 88999999999999999999999999999999999976
Q ss_pred cccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHH
Q 004766 597 DMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQ 676 (732)
Q Consensus 597 d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~ 676 (732)
++.. +...|.... .. ... ..||+||+||.+|..||. +.+++++|+
T Consensus 181 ~~~~---------~~~~~~~~~--~~------------~~~----------~~pp~li~~G~~D~~v~~--~~~~~~~l~ 225 (268)
T 1jjf_A 181 NTYP---------NERLFPDGG--KA------------ARE----------KLKLLFIACGTNDSLIGF--GQRVHEYCV 225 (268)
T ss_dssp TSCC---------HHHHCTTTT--HH------------HHH----------HCSEEEEEEETTCTTHHH--HHHHHHHHH
T ss_pred CCCc---------hhhhcCcch--hh------------hhh----------cCceEEEEecCCCCCccH--HHHHHHHHH
Confidence 5421 111122111 00 001 246799999999999884 788999999
Q ss_pred HhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHH-hCC
Q 004766 677 YVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKM-LGA 728 (732)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~-l~~ 728 (732)
++ |.+++++++++++|++.. ..+.+...+.||.++ +..
T Consensus 226 ~~----------g~~~~~~~~~g~~H~~~~----~~~~~~~~~~~l~~~~~~~ 264 (268)
T 1jjf_A 226 AN----------NINHVYWLIQGGGHDFNV----WKPGLWNFLQMADEAGLTR 264 (268)
T ss_dssp HT----------TCCCEEEEETTCCSSHHH----HHHHHHHHHHHHHHHTTTC
T ss_pred HC----------CCceEEEEcCCCCcCHhH----HHHHHHHHHHHHHhcCccc
Confidence 87 889999999999998742 234566788898875 443
No 55
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.82 E-value=2.6e-20 Score=188.37 Aligned_cols=240 Identities=11% Similarity=-0.002 Sum_probs=160.3
Q ss_pred ceEEEEEEEcc-CCCeeEEEEEEEcCCCC----CCCCccEEEEEcCCCCccCCCCcCh--hHHHHHHhcCcEEEEEcccC
Q 004766 449 FHVHQVFVPSK-DGSTKIPMFIVSKKNIK----LDGSHPCLLYGYGGFNISVTPSFSV--SRTILMRHLGAVFCIANIRG 521 (732)
Q Consensus 449 ~~~~~~~~~s~-dG~~~i~~~~~~p~~~~----~~~~~P~vv~~hG~~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~rG 521 (732)
+.++.+.+.+. .| .++++.++.|++.. ++++.|+||++||+.+... .|.. ....++++.|++|+.+++|+
T Consensus 5 m~~~~~~~~s~~~~-~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~ 81 (263)
T 2uz0_A 5 PAVMKIEYYSQVLD-MEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHN--SWLKRTNVERLLRGTNLIVVMPNTSN 81 (263)
T ss_dssp CEEEEEEEEETTTT-EEEEEEEEECC---------CCBCEEEEECCTTCCTT--HHHHHSCHHHHTTTCCCEEEECCCTT
T ss_pred ceEeEEEEechhhC-CceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHH--HHHhccCHHHHHhcCCeEEEEECCCC
Confidence 45667777654 67 89999999998752 3578999999999876543 3332 24556666899999999988
Q ss_pred CCCCchhHHhcccccCCccH----HHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccc
Q 004766 522 GGEYGEEWHKGGALAKKQNC----FDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 597 (732)
Q Consensus 522 ~g~~g~~~~~~~~~~~~~~~----~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d 597 (732)
++..... ..... .+|+.+.++.+..+..+|+++++++|+|+||++++.++. +|++|+++|+.+|..+
T Consensus 82 ~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~ 152 (263)
T 2uz0_A 82 GWYTDTQ--------YGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALS 152 (263)
T ss_dssp STTSBCT--------TSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCC
T ss_pred CccccCC--------CcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcc
Confidence 7542110 11122 234444444443323458899999999999999999998 8999999999999987
Q ss_pred ccccccCCC---CC-ccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHH
Q 004766 598 MLRYHKFTI---GH-AWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLA 673 (732)
Q Consensus 598 ~~~~~~~~~---~~-~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~ 673 (732)
+........ .. .+...++.+... .+..++|...+.+. ...+|+|++||.+|..|+ ++.++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--------~~~~p~li~~G~~D~~v~--~~~~~~~ 218 (263)
T 2uz0_A 153 FQNFSPESQNLGSPAYWRGVFGEIRDW----TTSPYSLESLAKKS--------DKKTKLWAWCGEQDFLYE--ANNLAVK 218 (263)
T ss_dssp SSSCCGGGTTCSCHHHHHHHHCCCSCT----TTSTTSHHHHGGGC--------CSCSEEEEEEETTSTTHH--HHHHHHH
T ss_pred hhhccccccccccchhHHHHcCChhhh----ccccCCHHHHHHhc--------cCCCeEEEEeCCCchhhH--HHHHHHH
Confidence 654221000 00 011112322111 12344555555542 112899999999999884 6789999
Q ss_pred HHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC
Q 004766 674 TMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 674 ~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
+|++. |.+++++++++ ||.+.. ..+....+++||.++|...
T Consensus 219 ~l~~~----------g~~~~~~~~~g-~H~~~~----~~~~~~~~~~~l~~~l~~~ 259 (263)
T 2uz0_A 219 NLKKL----------GFDVTYSHSAG-THEWYY----WEKQLEVFLTTLPIDFKLE 259 (263)
T ss_dssp HHHHT----------TCEEEEEEESC-CSSHHH----HHHHHHHHHHHSSSCCCCC
T ss_pred HHHHC----------CCCeEEEECCC-CcCHHH----HHHHHHHHHHHHHhhccch
Confidence 99987 88999999999 997631 2355677889998888754
No 56
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.82 E-value=2.2e-19 Score=193.81 Aligned_cols=240 Identities=11% Similarity=0.139 Sum_probs=165.0
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHH-HHHHhcCcEEEEEcccCCCCCchh
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRT-ILMRHLGAVFCIANIRGGGEYGEE 528 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~-~~l~~~G~~v~~~~~rG~g~~g~~ 528 (732)
..+++.++. +| .+++++++.+. +++.|+||++||+.+... .|..... .++. +||.|+++|+||.|+....
T Consensus 134 ~~~~~~i~~-~~-~~l~~~~~~~~----~~~~p~vv~~HG~~~~~~--~~~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~ 204 (405)
T 3fnb_A 134 PLKSIEVPF-EG-ELLPGYAIISE----DKAQDTLIVVGGGDTSRE--DLFYMLGYSGWE-HDYNVLMVDLPGQGKNPNQ 204 (405)
T ss_dssp CCEEEEEEE-TT-EEEEEEEECCS----SSCCCEEEEECCSSCCHH--HHHHHTHHHHHH-TTCEEEEECCTTSTTGGGG
T ss_pred CcEEEEEeE-CC-eEEEEEEEcCC----CCCCCEEEEECCCCCCHH--HHHHHHHHHHHh-CCcEEEEEcCCCCcCCCCC
Confidence 456677776 68 89999988432 245699999999755432 2222222 4445 9999999999998875321
Q ss_pred HHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCC--
Q 004766 529 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTI-- 606 (732)
Q Consensus 529 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~-- 606 (732)
.........+|+.+++++|..++ ++|+++|+|+||++++.++.++| +++++|+.+|+.++........
T Consensus 205 -----~~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~ 274 (405)
T 3fnb_A 205 -----GLHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFST 274 (405)
T ss_dssp -----TCCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC-
T ss_pred -----CCCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhh
Confidence 11223345789999999987764 68999999999999999999999 8999999999998754321000
Q ss_pred ---CCccc-c----------------------ccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCC
Q 004766 607 ---GHAWV-S----------------------DFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHD 660 (732)
Q Consensus 607 ---~~~~~-~----------------------~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D 660 (732)
.+.+. . .++.......++.+..+++...+.+ +.+|+||++|.+|
T Consensus 275 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------i~~PvLii~G~~D 344 (405)
T 3fnb_A 275 ALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNK----------IDVPSLFLVGAGE 344 (405)
T ss_dssp -----------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGG----------CCSCEEEEEETTS
T ss_pred hhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhh----------CCCCEEEEecCCC
Confidence 00000 0 0111111122233344444433444 7899999999999
Q ss_pred CCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCC-chHHHHHHHHHHHHHHHHHhCC
Q 004766 661 DRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGL-PTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 661 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
..||+.++.+++++|++. +.+++++++++..|+... .........+.+.+||.++|+.
T Consensus 345 ~~v~~~~~~~l~~~l~~~----------~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 345 DSELMRQSQVLYDNFKQR----------GIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp CHHHHHHHHHHHHHHHHT----------TCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC-
T ss_pred cCCChHHHHHHHHHhccC----------CCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCc
Confidence 999999999999999987 788999999777666321 2223346677889999999974
No 57
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.82 E-value=3.6e-20 Score=180.06 Aligned_cols=187 Identities=10% Similarity=0.046 Sum_probs=130.1
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHH----HHH
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASE----YLI 553 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~----~l~ 553 (732)
.+..|+||++||..+... .|.. +...|...|+.|++|+.+|.+.|+..+...... ....+++..+.++ .+.
T Consensus 19 ~~a~~~Vv~lHG~G~~~~--~~~~-l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~ 93 (210)
T 4h0c_A 19 QRAKKAVVMLHGRGGTAA--DIIS-LQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQ--NQPALDSALALVGEVVAEIE 93 (210)
T ss_dssp TTCSEEEEEECCTTCCHH--HHHG-GGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGG--GTTHHHHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEEeCCCCCHH--HHHH-HHHHhCCCCeEEEeecCCCCCccccccCCCccc--chHHHHHHHHHHHHHHHHHH
Confidence 356789999999543321 1221 233445589999999999887666554433222 1223444444443 344
Q ss_pred HcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCccc
Q 004766 554 SAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLH 633 (732)
Q Consensus 554 ~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~ 633 (732)
+. .+|++||+++|+|+||++++.++.++|++|+++|+.+|.+-... . . +..
T Consensus 94 ~~-~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~---------~--------~-----------~~~ 144 (210)
T 4h0c_A 94 AQ-GIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQE---------L--------A-----------IGN 144 (210)
T ss_dssp HT-TCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSS---------C--------C-----------GGG
T ss_pred Hh-CCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChh---------h--------h-----------hhh
Confidence 44 47999999999999999999999999999999998877431100 0 0 000
Q ss_pred CCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHH
Q 004766 634 NVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMID 713 (732)
Q Consensus 634 ~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 713 (732)
.... ...+|+|++||.+|++||+.++++++++|+++ |.++++++||+.||++.. +
T Consensus 145 ~~~~---------~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~----------g~~v~~~~ypg~gH~i~~------~ 199 (210)
T 4h0c_A 145 YKGD---------FKQTPVFISTGNPDPHVPVSRVQESVTILEDM----------NAAVSQVVYPGRPHTISG------D 199 (210)
T ss_dssp CCBC---------CTTCEEEEEEEESCTTSCHHHHHHHHHHHHHT----------TCEEEEEEEETCCSSCCH------H
T ss_pred hhhh---------ccCCceEEEecCCCCccCHHHHHHHHHHHHHC----------CCCeEEEEECCCCCCcCH------H
Confidence 0111 14579999999999999999999999999998 999999999999998853 2
Q ss_pred HHHHHHHHHH
Q 004766 714 EAADRYGFMA 723 (732)
Q Consensus 714 ~~~~~~~fl~ 723 (732)
+.+.+.+||.
T Consensus 200 el~~i~~wL~ 209 (210)
T 4h0c_A 200 EIQLVNNTIL 209 (210)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHHHc
Confidence 3445666664
No 58
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.82 E-value=3.8e-19 Score=172.94 Aligned_cols=200 Identities=10% Similarity=0.029 Sum_probs=146.5
Q ss_pred EEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCC--ccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchh
Q 004766 451 VHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFN--ISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE 528 (732)
Q Consensus 451 ~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~--~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~ 528 (732)
.+.+.+++.|| +++++++.|++ .++.|+||++||++. ......+...+...|+++||.|+++|+||.|.....
T Consensus 6 ~~~~~~~~~~g--~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 80 (208)
T 3trd_A 6 NEDFLIQGPVG--QLEVMITRPKG---IEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGR 80 (208)
T ss_dssp SSCEEEECSSS--EEEEEEECCSS---CCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC
T ss_pred cceEEEECCCc--eEEEEEEcCCC---CCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCC
Confidence 45678888888 89999998875 357899999999632 111222223345666669999999999998865432
Q ss_pred HHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCC
Q 004766 529 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGH 608 (732)
Q Consensus 529 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~ 608 (732)
+ .......+|+.+++++|.++ .+.++++++|+|+||.+++.++ ++| .++++|+..|..+.
T Consensus 81 ~------~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~---------- 140 (208)
T 3trd_A 81 Y------DNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY---------- 140 (208)
T ss_dssp C------CTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS----------
T ss_pred c------cchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccccc----------
Confidence 2 23345689999999999987 4458999999999999999999 667 89999988886621
Q ss_pred ccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCC
Q 004766 609 AWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQ 688 (732)
Q Consensus 609 ~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 688 (732)
| ++..+.. +..|+|+++|.+|..||+.++.++++++..
T Consensus 141 -~--------------------~~~~~~~----------~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~----------- 178 (208)
T 3trd_A 141 -E--------------------GFASLTQ----------MASPWLIVQGDQDEVVPFEQVKAFVNQISS----------- 178 (208)
T ss_dssp -G--------------------GGTTCCS----------CCSCEEEEEETTCSSSCHHHHHHHHHHSSS-----------
T ss_pred -C--------------------Cchhhhh----------cCCCEEEEECCCCCCCCHHHHHHHHHHccC-----------
Confidence 1 0111222 467999999999999999998888776542
Q ss_pred CCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHH
Q 004766 689 TNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 722 (732)
Q Consensus 689 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 722 (732)
.+++++++++||.+..... +....+.+||
T Consensus 179 --~~~~~~~~~~~H~~~~~~~---~~~~~i~~fl 207 (208)
T 3trd_A 179 --PVEFVVMSGASHFFHGRLI---ELRELLVRNL 207 (208)
T ss_dssp --CCEEEEETTCCSSCTTCHH---HHHHHHHHHH
T ss_pred --ceEEEEeCCCCCcccccHH---HHHHHHHHHh
Confidence 3789999999999876432 3334455565
No 59
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.82 E-value=6.1e-19 Score=178.74 Aligned_cols=237 Identities=12% Similarity=0.031 Sum_probs=161.7
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhH
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 529 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~ 529 (732)
..+.+.++ .+| .+|.+.++.|++ .+.|+||++||+.+......|. .+...|.++||.|+++|+||.|......
T Consensus 21 ~~~~~~~~-~~g-~~l~~~~~~p~~----~~~p~vv~~HG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 93 (270)
T 3pfb_A 21 GMATITLE-RDG-LQLVGTREEPFG----EIYDMAIIFHGFTANRNTSLLR-EIANSLRDENIASVRFDFNGHGDSDGKF 93 (270)
T ss_dssp EEEEEEEE-ETT-EEEEEEEEECSS----SSEEEEEEECCTTCCTTCHHHH-HHHHHHHHTTCEEEEECCTTSTTSSSCG
T ss_pred cceEEEec-cCC-EEEEEEEEcCCC----CCCCEEEEEcCCCCCccccHHH-HHHHHHHhCCcEEEEEccccccCCCCCC
Confidence 44555555 589 999999998864 4589999999987763222233 3455566699999999999988754322
Q ss_pred HhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc------
Q 004766 530 HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK------ 603 (732)
Q Consensus 530 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------ 603 (732)
.. ..-....+|+.++++++.++. +.++++++|+|+||++++.++.++|++++++|+..|..+......
T Consensus 94 ~~----~~~~~~~~d~~~~i~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~ 167 (270)
T 3pfb_A 94 EN----MTVLNEIEDANAILNYVKTDP--HVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQG 167 (270)
T ss_dssp GG----CCHHHHHHHHHHHHHHHHTCT--TEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETT
T ss_pred Cc----cCHHHHHHhHHHHHHHHHhCc--CCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhc
Confidence 11 111234688999999998763 335999999999999999999999999999999999876532110
Q ss_pred CCCCCccc----cccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhh
Q 004766 604 FTIGHAWV----SDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVL 679 (732)
Q Consensus 604 ~~~~~~~~----~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~ 679 (732)
......+. ..............+...++...+.. +..|+|+++|.+|..||+..+.++.+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--- 234 (270)
T 3pfb_A 168 VTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQ----------FTKPVCLIHGTDDTVVSPNASKKYDQIYQ--- 234 (270)
T ss_dssp EECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTT----------CCSCEEEEEETTCSSSCTHHHHHHHHHCS---
T ss_pred cccCcccccccccccccccchhHhhcccccCHHHHHhh----------CCccEEEEEcCCCCCCCHHHHHHHHHhCC---
Confidence 00000000 00111112233344555555555555 78899999999999999999888776643
Q ss_pred cCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 004766 680 CTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 725 (732)
.+++++++++||.+.... ..+....+.+||.++
T Consensus 235 -----------~~~~~~~~~~gH~~~~~~--~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 235 -----------NSTLHLIEGADHCFSDSY--QKNAVNLTTDFLQNN 267 (270)
T ss_dssp -----------SEEEEEETTCCTTCCTHH--HHHHHHHHHHHHC--
T ss_pred -----------CCeEEEcCCCCcccCccc--hHHHHHHHHHHHhhc
Confidence 368999999999987432 245666777887654
No 60
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.81 E-value=2.4e-19 Score=185.45 Aligned_cols=248 Identities=14% Similarity=0.088 Sum_probs=164.5
Q ss_pred eEEEEEEEcc-CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChh--HHHHHHhcCcEEEEEcccCCCCCc
Q 004766 450 HVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVS--RTILMRHLGAVFCIANIRGGGEYG 526 (732)
Q Consensus 450 ~~~~~~~~s~-dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~--~~~~l~~~G~~v~~~~~rG~g~~g 526 (732)
.++.+.+.|. .| .+|+++ +.|.. ++.|+||++||+.+......|... +..++++.|++|+++|.++++.|.
T Consensus 8 ~v~~~~~~S~~~~-~~i~v~-~~p~~----~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~ 81 (304)
T 1sfr_A 8 PVEYLQVPSPSMG-RDIKVQ-FQSGG----ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYS 81 (304)
T ss_dssp CCEEEEEEETTTT-EEEEEE-EECCS----TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTC
T ss_pred eEEEEEEECccCC-CceEEE-ECCCC----CCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCcccc
Confidence 4566777775 46 788877 44443 578999999998532222233221 345677689999999998765442
Q ss_pred hhHHhccccc--CCccHHHHHH--HHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc
Q 004766 527 EEWHKGGALA--KKQNCFDDFI--SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH 602 (732)
Q Consensus 527 ~~~~~~~~~~--~~~~~~~D~~--~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~ 602 (732)
.|....... .....+++++ +++.++.++--+++++++|+|+||||++++.++.++|++|+++|+.+|.+++....
T Consensus 82 -~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~ 160 (304)
T 1sfr_A 82 -DWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAM 160 (304)
T ss_dssp -BCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTT
T ss_pred -ccCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccc
Confidence 121110000 0123344543 34444444323677899999999999999999999999999999999987654310
Q ss_pred c--------CCCCC-ccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCC------------
Q 004766 603 K--------FTIGH-AWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDD------------ 661 (732)
Q Consensus 603 ~--------~~~~~-~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~------------ 661 (732)
. ...+. .+...||.+... .+.+.+|...+.+.. ...+|++|.||.+|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~p~~~~~~l~-------~~~~pi~l~~G~~D~~~~~~~~~~~~~ 229 (304)
T 1sfr_A 161 GPTLIGLAMGDAGGYKASDMWGPKEDP----AWQRNDPLLNVGKLI-------ANNTRVWVYCGNGKPSDLGGNNLPAKF 229 (304)
T ss_dssp HHHHHHHHHHHTTSCCHHHHHCSTTST----HHHHSCTTTTHHHHH-------HHTCEEEEECCCSCCBTTBCCSHHHHH
T ss_pred hhhhhhHhhhhccccchHHhcCCcchh----hhHhcCHHHHHHHhh-------hcCCeEEEEecCCCCccccccccccch
Confidence 0 00000 112235655332 245678876654300 025899999999998
Q ss_pred --CCCchHHHHHHHHHHHhhcCCCCCCCCC-CCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC
Q 004766 662 --RVVPLHSLKLLATMQYVLCTSLENSPQT-NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 662 --~v~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
+|++.++.+++++|+++ | .++.+++|++++|.+. .+.+.+...+.||.+.|+..
T Consensus 230 ~e~~~~~~~~~~~~~L~~~----------G~~~v~~~~~~~g~H~~~----~w~~~l~~~l~~l~~~l~~~ 286 (304)
T 1sfr_A 230 LEGFVRTSNIKFQDAYNAG----------GGHNGVFDFPDSGTHSWE----YWGAQLNAMKPDLQRALGAT 286 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHT----------TCCSEEEECCSCCCSSHH----HHHHHHHHTHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHHHHHHhC----------CCCceEEEecCCCccCHH----HHHHHHHHHHHHHHHhcCCC
Confidence 78899999999999998 8 9999999988899752 13455677899999999864
No 61
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.81 E-value=5.1e-19 Score=183.81 Aligned_cols=228 Identities=15% Similarity=0.133 Sum_probs=157.6
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC-CCcChhHHHHHH-hcCcEEEEEcccCCCCCch
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMR-HLGAVFCIANIRGGGEYGE 527 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~-~~~~~~~~~~l~-~~G~~v~~~~~rG~g~~g~ 527 (732)
.++.+.+++.+| .|++.++ +. .++.|+||++|||...... ..+.. +...|+ +.||.|+.+|+||.|+..
T Consensus 55 ~~~~~~i~~~~g--~i~~~~y-~~----~~~~p~vv~~HGgg~~~g~~~~~~~-~~~~la~~~g~~Vv~~dyrg~g~~~- 125 (311)
T 1jji_A 55 RVEDRTIKGRNG--DIRVRVY-QQ----KPDSPVLVYYHGGGFVICSIESHDA-LCRRIARLSNSTVVSVDYRLAPEHK- 125 (311)
T ss_dssp EEEEEEEEETTE--EEEEEEE-ES----SSSEEEEEEECCSTTTSCCTGGGHH-HHHHHHHHHTSEEEEEECCCTTTSC-
T ss_pred eEEEEEecCCCC--cEEEEEE-cC----CCCceEEEEECCcccccCChhHhHH-HHHHHHHHhCCEEEEecCCCCCCCC-
Confidence 578888888777 7888888 42 3578999999998632222 23333 334444 579999999999988642
Q ss_pred hHHhcccccCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhhCCCe----eeEEEEcCCcccccc
Q 004766 528 EWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRPDL----FGCALAHVGVMDMLR 600 (732)
Q Consensus 528 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p~~----f~a~v~~~p~~d~~~ 600 (732)
.....+|+.++++|+.+.. .+|+++|+|+|+|+||.+++.++.++|+. ++++|+.+|+.|+..
T Consensus 126 ----------~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~ 195 (311)
T 1jji_A 126 ----------FPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVA 195 (311)
T ss_dssp ----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSS
T ss_pred ----------CCCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCC
Confidence 2345789999999998752 35788999999999999999999887765 999999999988642
Q ss_pred cccCCCCCccccccC-CC--CCHHHHHHH-------------HhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCC
Q 004766 601 YHKFTIGHAWVSDFG-CS--EEEEEFYWL-------------IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVV 664 (732)
Q Consensus 601 ~~~~~~~~~~~~~~g-~p--~~~~~~~~~-------------~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~ 664 (732)
... .+ .++. .+ .......++ ...+|+. ... ...||+||+||++|..++
T Consensus 196 ~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~l--------~~~~P~li~~G~~D~l~~ 259 (311)
T 1jji_A 196 PTP-----SL-LEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIF--ADL--------ENLPPALIITAEYDPLRD 259 (311)
T ss_dssp CCH-----HH-HHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGG--SCC--------TTCCCEEEEEEEECTTHH
T ss_pred CCc-----cH-HHhcCCCccCCHHHHHHHHHHhCCCCccCCCcccCccc--ccc--------cCCChheEEEcCcCcchH
Confidence 210 00 0000 00 011111111 1124443 111 135899999999999874
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc---hHHHHHHHHHHHHHHHH
Q 004766 665 PLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAK 724 (732)
Q Consensus 665 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~ 724 (732)
++.+++++|+++ +.+++++++++++|++... .....+..+.+.+||.+
T Consensus 260 --~~~~~~~~l~~~----------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 260 --EGEVFGQMLRRA----------GVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp --HHHHHHHHHHHT----------TCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHc----------CCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 788999999988 8899999999999987532 12334566778888753
No 62
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.81 E-value=1.2e-18 Score=176.22 Aligned_cols=206 Identities=16% Similarity=0.077 Sum_probs=156.2
Q ss_pred CceEEEEEEEcc--CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCC
Q 004766 448 EFHVHQVFVPSK--DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEY 525 (732)
Q Consensus 448 ~~~~~~~~~~s~--dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~ 525 (732)
.+.++.+.+++. +| . ..+.+++|... ..++.|+||++||..+... .|.. +...|+++||.|+++|+||.|..
T Consensus 22 ~~~~~~~~~~~~~~~~-~-~~~~l~~p~~~-~~~~~p~vv~~HG~~~~~~--~~~~-~~~~l~~~G~~v~~~d~~g~g~~ 95 (262)
T 1jfr_A 22 PYATSQTSVSSLVASG-F-GGGTIYYPTST-ADGTFGAVVISPGFTAYQS--SIAW-LGPRLASQGFVVFTIDTNTTLDQ 95 (262)
T ss_dssp SSCEEEEEECTTTCSS-S-CCEEEEEESCC-TTCCEEEEEEECCTTCCGG--GTTT-HHHHHHTTTCEEEEECCSSTTCC
T ss_pred CCCccceEecceeccC-C-CceeEEecCCC-CCCCCCEEEEeCCcCCCch--hHHH-HHHHHHhCCCEEEEeCCCCCCCC
Confidence 456677777665 44 2 35777888753 2467899999999876643 3333 44556669999999999998764
Q ss_pred chhHHhcccccCCccHHHHHHHHHHHHHH----cCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccc
Q 004766 526 GEEWHKGGALAKKQNCFDDFISASEYLIS----AGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY 601 (732)
Q Consensus 526 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~----~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~ 601 (732)
.. ....|+.++++++.+ ....+.++++++|+|+||++++.++.++|+ ++++|+..|+..
T Consensus 96 ~~------------~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~---- 158 (262)
T 1jfr_A 96 PD------------SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT---- 158 (262)
T ss_dssp HH------------HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS----
T ss_pred Cc------------hhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc----
Confidence 32 234688899999988 445678899999999999999999999998 888888776421
Q ss_pred ccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchH-HHHHHHHHHHhhc
Q 004766 602 HKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH-SLKLLATMQYVLC 680 (732)
Q Consensus 602 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~-~~~~~~~l~~~~~ 680 (732)
...+.+ +.+|+|+++|.+|..|++.+ +.++++.|..
T Consensus 159 ------------------------------~~~~~~----------~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~--- 195 (262)
T 1jfr_A 159 ------------------------------DKTWPE----------LRTPTLVVGADGDTVAPVATHSKPFYESLPG--- 195 (262)
T ss_dssp ------------------------------CCCCTT----------CCSCEEEEEETTCSSSCTTTTHHHHHHHSCT---
T ss_pred ------------------------------cccccc----------cCCCEEEEecCccccCCchhhHHHHHHHhhc---
Confidence 112222 67899999999999999998 9999988842
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC
Q 004766 681 TSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
+.++++++++++||.+..... .+....+.+||.++++..
T Consensus 196 --------~~~~~~~~~~~~~H~~~~~~~--~~~~~~i~~fl~~~l~~~ 234 (262)
T 1jfr_A 196 --------SLDKAYLELRGASHFTPNTSD--TTIAKYSISWLKRFIDSD 234 (262)
T ss_dssp --------TSCEEEEEETTCCTTGGGSCC--HHHHHHHHHHHHHHHSCC
T ss_pred --------CCCceEEEeCCCCcCCcccch--HHHHHHHHHHHHHHhcCc
Confidence 567899999999999765432 356678899999998653
No 63
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.81 E-value=4.4e-19 Score=204.40 Aligned_cols=252 Identities=14% Similarity=0.114 Sum_probs=165.3
Q ss_pred CCCCCceEEEEEE-----EccCCCee--EEEEEEEcCCCCCCCCccEEEEEcCCCCc--c---------C----------
Q 004766 444 FDRSEFHVHQVFV-----PSKDGSTK--IPMFIVSKKNIKLDGSHPCLLYGYGGFNI--S---------V---------- 495 (732)
Q Consensus 444 ~~~~~~~~~~~~~-----~s~dG~~~--i~~~~~~p~~~~~~~~~P~vv~~hG~~~~--~---------~---------- 495 (732)
++......+.+++ +..|| ++ |.+.|++|++. ++.|+||..||..+. . .
T Consensus 161 ~~~~~~~~e~~~ve~~v~~~~DG-~~d~L~a~l~~P~~~---~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~ 236 (763)
T 1lns_A 161 FDSSLLEREVLWVESPVDSEQRG-ENDLIKIQIIRPKST---EKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSH 236 (763)
T ss_dssp SCGGGCEEEEEEEECSCCTTCSS-SCCEEEEEEEECCCS---SCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSE
T ss_pred cCCccceeeeeEEecCcccCCCC-CeeeEEEEEEecCCC---CcccEEEecCCcCCCCcccccccccccccccccccCcc
Confidence 3433344444444 46799 99 99999999873 689999966543221 0 0
Q ss_pred -------------------------CCCcC----hhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHH
Q 004766 496 -------------------------TPSFS----VSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFI 546 (732)
Q Consensus 496 -------------------------~~~~~----~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~ 546 (732)
...|. .....+++++||+|+++|+||.|+.+..+ ........+|+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~-----~~~~~~e~~D~~ 311 (763)
T 1lns_A 237 EIHVEQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQ-----TSGDYQQIYSMT 311 (763)
T ss_dssp ECCCCCCCCCCCCCCCCCCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCC-----CTTSHHHHHHHH
T ss_pred ccccccccccccccccccccccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcC-----CCCCHHHHHHHH
Confidence 01121 11235566699999999999998764432 122335679999
Q ss_pred HHHHHHHHc---------------CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCC------
Q 004766 547 SASEYLISA---------------GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFT------ 605 (732)
Q Consensus 547 ~~~~~l~~~---------------~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~------ 605 (732)
++++||..+ .+ +.+||+++|+||||++++.++.++|+.++|+|+.+|+.|+.......
T Consensus 312 a~IdwL~~~~~~~~d~~~~~~v~q~~-~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~ 390 (763)
T 1lns_A 312 AVIDWLNGRARAYTSRKKTHEIKASW-ANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSP 390 (763)
T ss_dssp HHHHHHTTSSCEESSTTCCCEECCTT-EEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCC
T ss_pred HHHHHHhhcccccccccccccccccC-CCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhc
Confidence 999999843 33 35799999999999999999999999999999999998764422100
Q ss_pred CC-Cccc----cc--cCCCCCH-------HHH-------------------HHHHhcCcccCCCCCCCCCCCCCCCCCeE
Q 004766 606 IG-HAWV----SD--FGCSEEE-------EEF-------------------YWLIKYSPLHNVRRPWEQNPDKPFQYPST 652 (732)
Q Consensus 606 ~~-~~~~----~~--~g~p~~~-------~~~-------------------~~~~~~sp~~~~~~~~~~~~~~~~~~~p~ 652 (732)
.+ ..+. .. +.....+ +.+ +++...+|...+++ +++|+
T Consensus 391 ~g~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~----------I~~Pv 460 (763)
T 1lns_A 391 GGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDK----------VKADV 460 (763)
T ss_dssp TTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGG----------CCSEE
T ss_pred ccCCchhhhHHhHHHHhhhcCcchhhhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhc----------CCCCE
Confidence 00 0000 00 0000000 000 11233455555555 88999
Q ss_pred EEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 653 LLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 653 Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
|++||.+|..||+.++.+++++|+. +.+..+.+ .++||....... ..+....+.+||.++|+.
T Consensus 461 Lii~G~~D~~vp~~~a~~l~~al~~-----------~~~~~l~i-~~~gH~~~~~~~-~~~~~~~i~~Ffd~~Lkg 523 (763)
T 1lns_A 461 LIVHGLQDWNVTPEQAYNFWKALPE-----------GHAKHAFL-HRGAHIYMNSWQ-SIDFSETINAYFVAKLLD 523 (763)
T ss_dssp EEEEETTCCSSCTHHHHHHHHHSCT-----------TCCEEEEE-ESCSSCCCTTBS-SCCHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCChHHHHHHHHhhcc-----------CCCeEEEE-eCCcccCccccc-hHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999998863 34566655 578998643211 123466789999999965
No 64
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.80 E-value=1e-18 Score=171.38 Aligned_cols=208 Identities=13% Similarity=0.042 Sum_probs=153.9
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCC--ccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCch
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFN--ISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE 527 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~--~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~ 527 (732)
..+.+.+++.+| +++++++.|++.. .++.|+||++||+.. ......+...+...|+++||.|+++|+||.|....
T Consensus 9 ~~~~~~~~~~~g--~~~~~~~~p~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 85 (220)
T 2fuk_A 9 ESAALTLDGPVG--PLDVAVDLPEPDV-AVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAG 85 (220)
T ss_dssp SCEEEEEEETTE--EEEEEEECCCTTS-CCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCS
T ss_pred cceEEEEeCCCC--eEEEEEEeCCCCC-ccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCC
Confidence 457788888887 7999999987620 145899999999642 21122222234566676899999999999886543
Q ss_pred hHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCC
Q 004766 528 EWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG 607 (732)
Q Consensus 528 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~ 607 (732)
.+ .......+|+.++++++.++. +.++++++|+|+||.+++.++.++ .++++|+..|..+...
T Consensus 86 ~~------~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~------- 148 (220)
T 2fuk_A 86 SF------DHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD------- 148 (220)
T ss_dssp CC------CTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC-------
T ss_pred Cc------ccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh-------
Confidence 32 223456899999999999874 667999999999999999999886 7899999888765421
Q ss_pred CccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCC
Q 004766 608 HAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSP 687 (732)
Q Consensus 608 ~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 687 (732)
+..+. ...|+|+++|.+|..||+.++.++++++.
T Consensus 149 ------------------------~~~~~-----------~~~p~l~i~g~~D~~~~~~~~~~~~~~~~----------- 182 (220)
T 2fuk_A 149 ------------------------FSDVQ-----------PPAQWLVIQGDADEIVDPQAVYDWLETLE----------- 182 (220)
T ss_dssp ------------------------CTTCC-----------CCSSEEEEEETTCSSSCHHHHHHHHTTCS-----------
T ss_pred ------------------------hhhcc-----------cCCcEEEEECCCCcccCHHHHHHHHHHhC-----------
Confidence 11111 24589999999999999998888776653
Q ss_pred CCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 688 QTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 688 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
..+++++++++||.+.... .+....+.+||.++|..
T Consensus 183 --~~~~~~~~~~~~H~~~~~~---~~~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 183 --QQPTLVRMPDTSHFFHRKL---IDLRGALQHGVRRWLPA 218 (220)
T ss_dssp --SCCEEEEETTCCTTCTTCH---HHHHHHHHHHHGGGCSS
T ss_pred --cCCcEEEeCCCCceehhhH---HHHHHHHHHHHHHHhhc
Confidence 2468899999999987632 24566788899888754
No 65
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.80 E-value=1e-18 Score=180.98 Aligned_cols=193 Identities=16% Similarity=0.067 Sum_probs=149.4
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| .. .+.+++|... .+.|+||++||+.+... .|. .+...|+++||.|+++|+||.|+....
T Consensus 79 ~~g-~~-~~~~~~p~~~---~~~p~vv~~HG~~~~~~--~~~-~~~~~la~~G~~vv~~d~~g~g~s~~~---------- 140 (306)
T 3vis_A 79 ADG-FG-GGTIYYPREN---NTYGAIAISPGYTGTQS--SIA-WLGERIASHGFVVIAIDTNTTLDQPDS---------- 140 (306)
T ss_dssp CSS-SC-CEEEEEESSC---SCEEEEEEECCTTCCHH--HHH-HHHHHHHTTTEEEEEECCSSTTCCHHH----------
T ss_pred cCC-Cc-ceEEEeeCCC---CCCCEEEEeCCCcCCHH--HHH-HHHHHHHhCCCEEEEecCCCCCCCcch----------
Confidence 566 33 4677888763 37899999999876532 232 345667769999999999998765322
Q ss_pred ccHHHHHHHHHHHHHHc------CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCcccc
Q 004766 539 QNCFDDFISASEYLISA------GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVS 612 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~------~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~ 612 (732)
..+|+.++++++.+. ..+|++|++++|+|+||.+++.++.++|+ ++++|+..|+..
T Consensus 141 --~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~--------------- 202 (306)
T 3vis_A 141 --RARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL--------------- 202 (306)
T ss_dssp --HHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS---------------
T ss_pred --HHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC---------------
Confidence 237899999999987 67889999999999999999999999998 888888777432
Q ss_pred ccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCch-HHHHHHHHHHHhhcCCCCCCCCCCC
Q 004766 613 DFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPL-HSLKLLATMQYVLCTSLENSPQTNP 691 (732)
Q Consensus 613 ~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~ 691 (732)
...+.+ +.+|+|+++|.+|..||+. ++.+++++++.. + +
T Consensus 203 -------------------~~~~~~----------~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~----------~-~ 242 (306)
T 3vis_A 203 -------------------NKSWRD----------ITVPTLIIGAEYDTIASVTLHSKPFYNSIPSP----------T-D 242 (306)
T ss_dssp -------------------CCCCTT----------CCSCEEEEEETTCSSSCTTTTHHHHHHTCCTT----------S-C
T ss_pred -------------------cccccc----------CCCCEEEEecCCCcccCcchhHHHHHHHhccC----------C-C
Confidence 011222 6789999999999999998 699998888754 4 8
Q ss_pred EEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC
Q 004766 692 IIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 692 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
+++++++++||++..... .+....+.+||.++++..
T Consensus 243 ~~~~~~~g~gH~~~~~~~--~~~~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 243 KAYLELDGASHFAPNITN--KTIGMYSVAWLKRFVDED 278 (306)
T ss_dssp EEEEEETTCCTTGGGSCC--HHHHHHHHHHHHHHHSCC
T ss_pred ceEEEECCCCccchhhch--hHHHHHHHHHHHHHccCc
Confidence 999999999999764433 345568899999998754
No 66
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.80 E-value=2.7e-18 Score=180.66 Aligned_cols=242 Identities=12% Similarity=0.076 Sum_probs=165.3
Q ss_pred CceEEEE-EEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCc
Q 004766 448 EFHVHQV-FVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 526 (732)
Q Consensus 448 ~~~~~~~-~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g 526 (732)
.+..+++ .+.+.|| .+|.+.++.|.+ ++.|+||++||+.+... .|. .+...|.++||.|+++|+||.|...
T Consensus 31 ~~~~~~~~~~~~~dg-~~l~~~~~~p~~----~~~p~vv~~HG~~~~~~--~~~-~~~~~l~~~g~~vi~~D~~G~G~S~ 102 (342)
T 3hju_A 31 SIPYQDLPHLVNADG-QYLFCRYWKPTG----TPKALIFVSHGAGEHSG--RYE-ELARMLMGLDLLVFAHDHVGHGQSE 102 (342)
T ss_dssp SCBTTSSCEEECTTS-CEEEEEEECCSS----CCSEEEEEECCTTCCGG--GGH-HHHHHHHTTTEEEEEECCTTSTTSC
T ss_pred CcccccCceEEccCC-eEEEEEEeCCCC----CCCcEEEEECCCCcccc--hHH-HHHHHHHhCCCeEEEEcCCCCcCCC
Confidence 3333444 6778899 999999998864 56799999999876543 343 3456667689999999999988654
Q ss_pred hhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc---
Q 004766 527 EEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK--- 603 (732)
Q Consensus 527 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~--- 603 (732)
... .....-....+|+.+++++|..+ .+.++++++|+|+||++++.++.++|++++++|+..|+.+......
T Consensus 103 ~~~---~~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 177 (342)
T 3hju_A 103 GER---MVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTF 177 (342)
T ss_dssp SST---TCCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHH
T ss_pred CcC---CCcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHH
Confidence 211 11112233478999999999877 4567999999999999999999999999999999999865432110
Q ss_pred --------------CCCCCccccccCCCCCHHHHHHHHhcCcc----------------------cCCCCCCCCCCCCCC
Q 004766 604 --------------FTIGHAWVSDFGCSEEEEEFYWLIKYSPL----------------------HNVRRPWEQNPDKPF 647 (732)
Q Consensus 604 --------------~~~~~~~~~~~g~p~~~~~~~~~~~~sp~----------------------~~~~~~~~~~~~~~~ 647 (732)
..... ....+. ..+......+.. .|+ ..+.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 244 (342)
T 3hju_A 178 KVLAAKVLNLVLPNLSLGP-IDSSVL-SRNKTEVDIYNS-DPLICRAGLKVCFGIQLLNAVSRVERALPK---------- 244 (342)
T ss_dssp HHHHHHHHHHHCTTCBCCC-CCGGGS-CSCHHHHHHHHT-CTTCCCSCCBHHHHHHHHHHHHHHHHHGGG----------
T ss_pred HHHHHHHHHHhccccccCc-cccccc-ccchHHHHHHhc-CcccccccccHHHHHHHHHHHHHHHHHHHh----------
Confidence 00000 000000 011222211111 111 12222
Q ss_pred CCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCch-HHHHHHHHHHHHHHHHHh
Q 004766 648 QYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT-QKMIDEAADRYGFMAKML 726 (732)
Q Consensus 648 ~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~~fl~~~l 726 (732)
+.+|+|+++|.+|..|++.++.++++.+. +..+++++++++||.+.... ....+....+++||.+++
T Consensus 245 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (342)
T 3hju_A 245 LTVPFLLLQGSADRLCDSKGAYLLMELAK------------SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 312 (342)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHCC------------CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEEeCCCcccChHHHHHHHHHcC------------CCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhccc
Confidence 68899999999999999998888877764 23578999999999976432 223466677899999887
Q ss_pred C
Q 004766 727 G 727 (732)
Q Consensus 727 ~ 727 (732)
.
T Consensus 313 ~ 313 (342)
T 3hju_A 313 A 313 (342)
T ss_dssp H
T ss_pred C
Confidence 4
No 67
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.80 E-value=7.5e-17 Score=174.57 Aligned_cols=263 Identities=16% Similarity=0.086 Sum_probs=180.2
Q ss_pred CCEEEEEEEcCCCC-eeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCC
Q 004766 90 GNKYFYFHNTGLQP-QSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQ 168 (732)
Q Consensus 90 g~~~~~~~~~~~~~-~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g 168 (732)
+.+++|.....+.. ...|++.+..++..+.|.... ..+..++|||||++|||+...+|. .+|++||+++|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~-------~~v~~~~~Spdg~~la~~s~~~~~--~~i~~~d~~tg 213 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSP-------QPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 213 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEES-------SCEEEEEECTTSSEEEEEECTTSS--CEEEEEETTTC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCC-------CcceeeEEcCCCCEEEEEEecCCC--cEEEEEECCCC
Confidence 56777776643321 245777765444445554322 125689999999999999865543 58999999999
Q ss_pred ceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEe
Q 004766 169 IVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSG 248 (732)
Q Consensus 169 ~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~ 248 (732)
+.............++|||||+.|+|+.... ....||++++.++... .+. ........+
T Consensus 214 ~~~~l~~~~~~~~~~~~spdg~~la~~~~~~----------------g~~~i~~~d~~~~~~~--~l~---~~~~~~~~~ 272 (415)
T 2hqs_A 214 AVRQVASFPRHNGAPAFSPDGSKLAFALSKT----------------GSLNLYVMDLASGQIR--QVT---DGRSNNTEP 272 (415)
T ss_dssp CEEEEECCSSCEEEEEECTTSSEEEEEECTT----------------SSCEEEEEETTTCCEE--ECC---CCSSCEEEE
T ss_pred cEEEeecCCCcccCEEEcCCCCEEEEEEecC----------------CCceEEEEECCCCCEE--eCc---CCCCcccce
Confidence 8654322222347899999999999886432 2347999999876431 222 223355689
Q ss_pred EEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCCCCc
Q 004766 249 HVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKY 327 (732)
Q Consensus 249 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~ 327 (732)
.|||||++|++.+.+.. ...||++|+.++. ...++.... .....|+|||+.|++.+..++ ..
T Consensus 273 ~~spdg~~l~~~s~~~g--~~~i~~~d~~~~~--------------~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g-~~ 335 (415)
T 2hqs_A 273 TWFPDSQNLAFTSDQAG--RPQVYKVNINGGA--------------PQRITWEGSQNQDADVSSDGKFMVMVSSNGG-QQ 335 (415)
T ss_dssp EECTTSSEEEEEECTTS--SCEEEEEETTSSC--------------CEECCCSSSEEEEEEECTTSSEEEEEEECSS-CE
T ss_pred EECCCCCEEEEEECCCC--CcEEEEEECCCCC--------------EEEEecCCCcccCeEECCCCCEEEEEECcCC-ce
Confidence 99999999999875433 4579999998743 223322211 122369999999998876543 57
Q ss_pred eEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccC
Q 004766 328 KIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARRE 404 (732)
Q Consensus 328 ~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d 404 (732)
.|+.+|++++. ...+..+ ..+..+.|++++ .|++....++...|++||++ |+..+.|+.+.+.+..++++|.
T Consensus 336 ~i~~~d~~~~~-~~~l~~~---~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 336 HIAKQDLATGG-VQVLSST---FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp EEEEEETTTCC-EEECCCS---SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCC
T ss_pred EEEEEECCCCC-EEEecCC---CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccc
Confidence 89999999876 4444433 256788999864 56677777777899999997 5555788777788888888764
No 68
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.80 E-value=3e-18 Score=173.43 Aligned_cols=241 Identities=13% Similarity=0.049 Sum_probs=156.6
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCcc-CCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHH
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNIS-VTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWH 530 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~ 530 (732)
.+..+.+.|| .++++.++.|++ .++.|+||++||+.... ....|...+..++++. |.|+++|+||+++...
T Consensus 4 ~~~~~~~~dg-~~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~~--- 75 (275)
T 3h04_A 4 IKYKVITKDA-FALPYTIIKAKN---QPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVSL--- 75 (275)
T ss_dssp EEEEEECTTS-CEEEEEEECCSS---SSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSCH---
T ss_pred eEEEEecCCc-EEEEEEEEccCC---CCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCcccc---
Confidence 4566788899 999999998874 35789999999987322 2233444566778744 9999999999875422
Q ss_pred hcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc-CC----
Q 004766 531 KGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK-FT---- 605 (732)
Q Consensus 531 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~-~~---- 605 (732)
...++|+.++++++.++ .+.++++++|+|+||++++.++.+ +.++++|+.+|+.++..... ..
T Consensus 76 --------~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~ 143 (275)
T 3h04_A 76 --------DCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYY 143 (275)
T ss_dssp --------HHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHH
T ss_pred --------chhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchh
Confidence 33578999999999987 567899999999999999999998 78999999999887632110 00
Q ss_pred ------CCCccccc------cC-CCC--CHHHHHHHHhcCc----ccCCCCC---CCCCCC-CCCCCCeEEEEeeCCCCC
Q 004766 606 ------IGHAWVSD------FG-CSE--EEEEFYWLIKYSP----LHNVRRP---WEQNPD-KPFQYPSTLLLTADHDDR 662 (732)
Q Consensus 606 ------~~~~~~~~------~g-~p~--~~~~~~~~~~~sp----~~~~~~~---~~~~~~-~~~~~~p~Li~~g~~D~~ 662 (732)
........ .. .+. ....+........ +...... +..... ...+. |+||++|++|..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~ 222 (275)
T 3h04_A 144 AKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYD 222 (275)
T ss_dssp HHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSS
T ss_pred hcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCC
Confidence 00000000 00 000 0001100011000 0000000 000000 00134 999999999999
Q ss_pred CCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchH-HHHHHHHHHHHHHHHHhC
Q 004766 663 VVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQ-KMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 663 v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~~fl~~~l~ 727 (732)
||+.++.++++++. ...+++++++||.+..... ...+....+.+||.++|.
T Consensus 223 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 223 VPVEESEHIMNHVP--------------HSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp SCTHHHHHHHTTCS--------------SEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred CChHHHHHHHHhcC--------------CceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 99999888876543 3469999999999764322 124667788999998874
No 69
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.79 E-value=7.2e-19 Score=179.83 Aligned_cols=213 Identities=17% Similarity=0.117 Sum_probs=139.7
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
|..+.||++||..++.. .|.. +...|+++||.|+++|+||.|.......... -..-.+|+.+++++|.+.
T Consensus 49 G~~~~VlllHG~~~s~~--~~~~-la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~----~~~~~~d~~~~~~~l~~~--- 118 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGSPQ--SMRF-LAEGFARAGYTVATPRLTGHGTTPAEMAAST----ASDWTADIVAAMRWLEER--- 118 (281)
T ss_dssp CSSEEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEECCCTTSSSCHHHHHTCC----HHHHHHHHHHHHHHHHHH---
T ss_pred CCCceEEEECCCCCCHH--HHHH-HHHHHHHCCCEEEEECCCCCCCCCccccCCC----HHHHHHHHHHHHHHHHhC---
Confidence 45567999999766542 3333 4566776999999999999887644332211 112357888888888764
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc----cC-CCCCcc------------ccccCCCCCH-
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH----KF-TIGHAW------------VSDFGCSEEE- 620 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~----~~-~~~~~~------------~~~~g~p~~~- 620 (732)
.+++.++|+|+||++++.++.++|++++++|+..|...+.... .+ .....+ ..++..+..+
T Consensus 119 -~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (281)
T 4fbl_A 119 -CDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPV 197 (281)
T ss_dssp -CSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEG
T ss_pred -CCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCch
Confidence 3689999999999999999999999999999998876542210 00 000000 0111111100
Q ss_pred HHHHHHHhcCc--ccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeC
Q 004766 621 EEFYWLIKYSP--LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIER 698 (732)
Q Consensus 621 ~~~~~~~~~sp--~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 698 (732)
.....+..... -..+.+ +..|+||+||.+|..||+.++.++++++. +.++++++++
T Consensus 198 ~~~~~~~~~~~~~~~~l~~----------i~~P~Lii~G~~D~~v~~~~~~~l~~~l~------------~~~~~l~~~~ 255 (281)
T 4fbl_A 198 PAIKHLITIGAVAEMLLPR----------VKCPALIIQSREDHVVPPHNGELIYNGIG------------STEKELLWLE 255 (281)
T ss_dssp GGHHHHHHHHHHHHHHGGG----------CCSCEEEEEESSCSSSCTHHHHHHHHHCC------------CSSEEEEEES
T ss_pred HHHHHHHHhhhhccccccc----------cCCCEEEEEeCCCCCcCHHHHHHHHHhCC------------CCCcEEEEEC
Confidence 00111111000 011222 78899999999999999999999888765 4567999999
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHH
Q 004766 699 KAGHGVGLPTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 699 ~~gH~~~~~~~~~~~~~~~~~~fl~~~ 725 (732)
++||....... .....+.+.+||.+|
T Consensus 256 ~~gH~~~~e~~-~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 256 NSYHVATLDND-KELILERSLAFIRKH 281 (281)
T ss_dssp SCCSCGGGSTT-HHHHHHHHHHHHHTC
T ss_pred CCCCcCccccC-HHHHHHHHHHHHHhC
Confidence 99998654332 234567789999875
No 70
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.79 E-value=8.3e-19 Score=177.28 Aligned_cols=200 Identities=12% Similarity=0.055 Sum_probs=147.1
Q ss_pred EEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCc-cCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhc
Q 004766 454 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNI-SVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKG 532 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~ 532 (732)
..++-.+| ..+++.++.|++ ++.|+||++|||... .....|.. +...|+++||.|+++|+||++++.
T Consensus 41 ~~i~~~~~-~~~~~~~~~p~~----~~~p~vv~~HGgg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~~~~~~~~------ 108 (262)
T 2pbl_A 41 LNLSYGEG-DRHKFDLFLPEG----TPVGLFVFVHGGYWMAFDKSSWSH-LAVGALSKGWAVAMPSYELCPEVR------ 108 (262)
T ss_dssp EEEESSSS-TTCEEEEECCSS----SCSEEEEEECCSTTTSCCGGGCGG-GGHHHHHTTEEEEEECCCCTTTSC------
T ss_pred cccccCCC-CCceEEEEccCC----CCCCEEEEEcCcccccCChHHHHH-HHHHHHhCCCEEEEeCCCCCCCCC------
Confidence 34444566 678888888875 578999999997522 22223433 344565599999999999987532
Q ss_pred ccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC------CCeeeEEEEcCCcccccccccCCC
Q 004766 533 GALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR------PDLFGCALAHVGVMDMLRYHKFTI 606 (732)
Q Consensus 533 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~p~~d~~~~~~~~~ 606 (732)
.....+|+.+++++|..+.. ++++++|+|+||++++.++.++ |++++++|+.+|+.++......
T Consensus 109 -----~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~-- 178 (262)
T 2pbl_A 109 -----ISEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT-- 178 (262)
T ss_dssp -----HHHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS--
T ss_pred -----hHHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhh--
Confidence 12346899999999987643 6999999999999999999887 8999999999998876443221
Q ss_pred CCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCC
Q 004766 607 GHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENS 686 (732)
Q Consensus 607 ~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 686 (732)
.+...++. .. ..+...+|...+.. +.+|+|++||.+|..|++.++.++++++.
T Consensus 179 --~~~~~~~~--~~---~~~~~~~~~~~~~~----------~~~P~lii~G~~D~~~~~~~~~~~~~~~~---------- 231 (262)
T 2pbl_A 179 --SMNEKFKM--DA---DAAIAESPVEMQNR----------YDAKVTVWVGGAERPAFLDQAIWLVEAWD---------- 231 (262)
T ss_dssp --TTHHHHCC--CH---HHHHHTCGGGCCCC----------CSCEEEEEEETTSCHHHHHHHHHHHHHHT----------
T ss_pred --hhhhhhCC--CH---HHHHhcCcccccCC----------CCCCEEEEEeCCCCcccHHHHHHHHHHhC----------
Confidence 01111111 12 22456788877665 78999999999999999999999888764
Q ss_pred CCCCCEEEEEeCCCCCCCCCc
Q 004766 687 PQTNPIIGRIERKAGHGVGLP 707 (732)
Q Consensus 687 ~~~~~~~~~~~~~~gH~~~~~ 707 (732)
+++++++++||.....
T Consensus 232 -----~~~~~~~~~~H~~~~~ 247 (262)
T 2pbl_A 232 -----ADHVIAFEKHHFNVIE 247 (262)
T ss_dssp -----CEEEEETTCCTTTTTG
T ss_pred -----CeEEEeCCCCcchHHh
Confidence 4889999999987643
No 71
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.79 E-value=1.9e-18 Score=180.73 Aligned_cols=222 Identities=13% Similarity=0.056 Sum_probs=149.7
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCccC-CCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHH
Q 004766 465 IPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFD 543 (732)
Q Consensus 465 i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~ 543 (732)
++++++.|.+ ++.|+||++|||..... ...|......+..+.||.|+++|+||+++... ...++
T Consensus 84 ~~~~~~~p~~----~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~~-----------~~~~~ 148 (326)
T 3d7r_A 84 MQVFRFNFRH----QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHI-----------DDTFQ 148 (326)
T ss_dssp EEEEEEESTT----CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSCH-----------HHHHH
T ss_pred EEEEEEeeCC----CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCCc-----------hHHHH
Confidence 5567777764 46799999999854322 22233333344444699999999999775321 23579
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCe----eeEEEEcCCcccccccccCCCCCccccccCCCCC
Q 004766 544 DFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL----FGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEE 619 (732)
Q Consensus 544 D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~----f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~ 619 (732)
|+.+++++|.++ .++++++|+|+|+||++++.++.++|+. ++++|+.+|+.++........ ... ........
T Consensus 149 d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~-~~~-~~~~~~~~ 224 (326)
T 3d7r_A 149 AIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDIS-DAL-IEQDAVLS 224 (326)
T ss_dssp HHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCC-HHH-HHHCSSCC
T ss_pred HHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHH-hhh-cccCcccC
Confidence 999999999987 7889999999999999999999887776 999999999887643211000 000 00000001
Q ss_pred HHHHH----HHH--------hcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCC
Q 004766 620 EEEFY----WLI--------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSP 687 (732)
Q Consensus 620 ~~~~~----~~~--------~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 687 (732)
..... .+. ..+|+...- ...+|+||++|++|. +..++.+++++|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~P~lii~G~~D~--~~~~~~~~~~~l~~~--------- 283 (326)
T 3d7r_A 225 QFGVNEIMKKWANGLPLTDKRISPINGTI----------EGLPPVYMFGGGREM--THPDMKLFEQMMLQH--------- 283 (326)
T ss_dssp HHHHHHHHHHHHTTSCTTSTTTSGGGSCC----------TTCCCEEEEEETTST--THHHHHHHHHHHHHT---------
T ss_pred HHHHHHHHHHhcCCCCCCCCeECcccCCc----------ccCCCEEEEEeCccc--chHHHHHHHHHHHHC---------
Confidence 11111 111 123333211 145799999999996 455788999999987
Q ss_pred CCCCEEEEEeCCCCCCCCC-chHHHHHHHHHHHHHHHHHhC
Q 004766 688 QTNPIIGRIERKAGHGVGL-PTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 688 ~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~~fl~~~l~ 727 (732)
+.++++++++++||++.. +..+..+....+.+||.+++.
T Consensus 284 -~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 284 -HQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp -TCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred -CCcEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 889999999999998754 112234677788999987765
No 72
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.78 E-value=6.7e-19 Score=179.80 Aligned_cols=240 Identities=13% Similarity=0.072 Sum_probs=159.0
Q ss_pred ceEEEEEEEcc-CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcCh--hHHHHHHhcCcEEEEEcccCCCCC
Q 004766 449 FHVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSV--SRTILMRHLGAVFCIANIRGGGEY 525 (732)
Q Consensus 449 ~~~~~~~~~s~-dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~rG~g~~ 525 (732)
...+.+.+.|. +| .+++++ +.|++ .|+||++||+.+......|.. .+..+++++|++|+++|.++++.|
T Consensus 9 ~~~~~~~~~S~~~~-~~~~~~-~~P~~------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~ 80 (280)
T 1r88_A 9 APYENLMVPSPSMG-RDIPVA-FLAGG------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMY 80 (280)
T ss_dssp CCCEEEEEEETTTT-EEEEEE-EECCS------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTT
T ss_pred CCEEEEEEECcccC-CcceEE-EeCCC------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCcc
Confidence 35567777775 78 899999 77764 289999999853222222322 234667778999999999876544
Q ss_pred chhHHhcccccCCccHHHHHH--HHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc
Q 004766 526 GEEWHKGGALAKKQNCFDDFI--SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK 603 (732)
Q Consensus 526 g~~~~~~~~~~~~~~~~~D~~--~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~ 603 (732)
. .|..... ..+.+++ +++.++.++--+++++++|+|+||||++++.++.++|++|+++|+.+|.+++.....
T Consensus 81 ~-~~~~~~~-----~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~ 154 (280)
T 1r88_A 81 T-NWEQDGS-----KQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTT 154 (280)
T ss_dssp S-BCSSCTT-----CBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHH
T ss_pred C-CCCCCCC-----CcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccc
Confidence 1 1211110 1233322 334444443336788999999999999999999999999999999999887533110
Q ss_pred ---------CCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEe----eCCCCC-------C
Q 004766 604 ---------FTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLT----ADHDDR-------V 663 (732)
Q Consensus 604 ---------~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~----g~~D~~-------v 663 (732)
......+...||.+... .+.+.+|+.++++.. ...+|+||.| |.+|.+ |
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~p~~~~~~~~-------~~~~pv~i~~~~~~G~~D~~~~~~~~~~ 223 (280)
T 1r88_A 155 NGAIAAGMQQFGGVDTNGMWGAPQLG----RWKWHDPWVHASLLA-------QNNTRVWVWSPTNPGASDPAAMIGQAAE 223 (280)
T ss_dssp HHHHHHHHHHHHCCCTHHHHCCGGGS----TTGGGCTTTTHHHHH-------HTTCEEEEECCSSCCCSSGGGGTTCHHH
T ss_pred hhhHHHHhhhccccchhhhcCCCchh----hhHhcCHHHHHHhhh-------ccCCeEEEEeccCCCCCCcccccchhHH
Confidence 00000112234554321 234567776654410 0257999999 999985 6
Q ss_pred CchHHHHHHHHHHHhhcCCCCCCCCC-CCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 664 VPLHSLKLLATMQYVLCTSLENSPQT-NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 664 ~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
++.++.+++++|++. | .++++.++++++|.+.. +...+...+.|+.+.|-
T Consensus 224 ~~~~~~~~~~~L~~~----------g~~~~~~~~~~~g~H~~~~----w~~~l~~~l~~~~~~~~ 274 (280)
T 1r88_A 224 AMGNSRMFYNQYRSV----------GGHNGHFDFPASGDNGWGS----WAPQLGAMSGDIVGAIR 274 (280)
T ss_dssp HHHHHHHHHHHHHHT----------TCCSEEEECCSSCCSSHHH----HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHC----------CCcceEEEecCCCCcChhH----HHHHHHHHHHHHHHHHh
Confidence 899999999999987 8 99999999899997532 23455566777776653
No 73
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.78 E-value=1.4e-18 Score=187.28 Aligned_cols=235 Identities=10% Similarity=-0.007 Sum_probs=158.9
Q ss_pred ceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchh
Q 004766 449 FHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE 528 (732)
Q Consensus 449 ~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~ 528 (732)
...+++.++. +| ..|+++++.|++ .++.|+||++||..+... .+...+...+.++||.|+++|+||.|+....
T Consensus 166 ~~~~~v~i~~-~g-~~l~~~~~~P~~---~~~~P~vv~~hG~~~~~~--~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~ 238 (415)
T 3mve_A 166 YIIKQLEIPF-EK-GKITAHLHLTNT---DKPHPVVIVSAGLDSLQT--DMWRLFRDHLAKHDIAMLTVDMPSVGYSSKY 238 (415)
T ss_dssp SEEEEEEEEC-SS-SEEEEEEEESCS---SSCEEEEEEECCTTSCGG--GGHHHHHHTTGGGTCEEEEECCTTSGGGTTS
T ss_pred CCeEEEEEEE-CC-EEEEEEEEecCC---CCCCCEEEEECCCCccHH--HHHHHHHHHHHhCCCEEEEECCCCCCCCCCC
Confidence 3567788887 77 899999999976 467899999999765432 1222234556569999999999998754221
Q ss_pred HHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccc-cc--CC
Q 004766 529 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY-HK--FT 605 (732)
Q Consensus 529 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~-~~--~~ 605 (732)
...........++++++.....+|++||+++|+|+||++++.++..+|++++++|+..|+++.... .. ..
T Consensus 239 -------~~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~ 311 (415)
T 3mve_A 239 -------PLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQ 311 (415)
T ss_dssp -------CCCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHTT
T ss_pred -------CCCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHHH
Confidence 111112233467788888888889999999999999999999999889999999999998643211 00 00
Q ss_pred CCCc----cccccCCC-CCHH-HHHHHHhcCcccC----CCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHH
Q 004766 606 IGHA----WVSDFGCS-EEEE-EFYWLIKYSPLHN----VRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATM 675 (732)
Q Consensus 606 ~~~~----~~~~~g~p-~~~~-~~~~~~~~sp~~~----~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l 675 (732)
.... +...+|.. .... ....+..+++... +. .+.+|+||++|.+|..||+.++.++++
T Consensus 312 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~i~~PvLii~G~~D~~vp~~~~~~l~~-- 379 (415)
T 3mve_A 312 MPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSR----------KTKVPILAMSLEGDPVSPYSDNQMVAF-- 379 (415)
T ss_dssp SCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSS----------CBSSCEEEEEETTCSSSCHHHHHHHHH--
T ss_pred hHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccC----------CCCCCEEEEEeCCCCCCCHHHHHHHHH--
Confidence 0000 00112322 2222 2223344444322 12 378999999999999999998887665
Q ss_pred HHhhcCCCCCCCCCCCEEEEEeCC-CCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 676 QYVLCTSLENSPQTNPIIGRIERK-AGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
. +.+++++++++ .+|. ...+....+.+||.++|.
T Consensus 380 --~----------~~~~~l~~i~g~~~h~------~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 380 --F----------STYGKAKKISSKTITQ------GYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp --T----------BTTCEEEEECCCSHHH------HHHHHHHHHHHHHHHHHT
T ss_pred --h----------CCCceEEEecCCCccc------chHHHHHHHHHHHHHHhc
Confidence 3 55678899988 2221 224566788999999874
No 74
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.78 E-value=8.6e-19 Score=178.11 Aligned_cols=209 Identities=14% Similarity=0.114 Sum_probs=143.2
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHh--cCcEEEEEccc---CCCCCchhHHhc
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH--LGAVFCIANIR---GGGEYGEEWHKG 532 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~r---G~g~~g~~~~~~ 532 (732)
+..+ ++...+..+|.. ++++.|+||++||..+... .|.. +...|.. .++.+++++.+ ...+.|..|+..
T Consensus 46 ~~~~-~~~l~y~~~p~~--~~~~~plVI~LHG~G~~~~--~~~~-~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~ 119 (285)
T 4fhz_A 46 ADIM-TRKLTFGRRGAA--PGEATSLVVFLHGYGADGA--DLLG-LAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPI 119 (285)
T ss_dssp --CC-CCCCCEEEEESC--TTCCSEEEEEECCTTBCHH--HHHT-THHHHGGGSTTEEEEEECCSEECTTSSSCEESSCC
T ss_pred cccc-cccceeecCCCC--CCCCCcEEEEEcCCCCCHH--HHHH-HHHHHHHhCCCeEEEecCCCcccccCCCccccccc
Confidence 3344 444444455543 4678899999999544321 1211 2233332 38899998853 223456667532
Q ss_pred ccccC--Cc-------cHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc
Q 004766 533 GALAK--KQ-------NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK 603 (732)
Q Consensus 533 ~~~~~--~~-------~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~ 603 (732)
..... .. ....++.+.++.++++.-+|++||+++|+|+||.+++.++.++|+.|+++|+.++.+..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~----- 194 (285)
T 4fhz_A 120 PWLDGSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA----- 194 (285)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC-----
T ss_pred ccccCcccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC-----
Confidence 11111 11 12345666677777666689999999999999999999999999999999987763210
Q ss_pred CCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCC
Q 004766 604 FTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSL 683 (732)
Q Consensus 604 ~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~ 683 (732)
++.. .. . . ...+|+|++||++|++||+.++.+++++|+++
T Consensus 195 ----------------~~~~---~~-----~-~----------~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~----- 234 (285)
T 4fhz_A 195 ----------------PERL---AE-----E-A----------RSKPPVLLVHGDADPVVPFADMSLAGEALAEA----- 234 (285)
T ss_dssp ----------------HHHH---HH-----H-C----------CCCCCEEEEEETTCSSSCTHHHHHHHHHHHHT-----
T ss_pred ----------------chhh---hh-----h-h----------hhcCcccceeeCCCCCcCHHHHHHHHHHHHHC-----
Confidence 1111 00 0 0 14679999999999999999999999999998
Q ss_pred CCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 684 ENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
|.++++++|++.||++.. +++.++.+||.++|-.
T Consensus 235 -----g~~~~~~~y~g~gH~i~~------~~l~~~~~fL~~~Lpd 268 (285)
T 4fhz_A 235 -----GFTTYGHVMKGTGHGIAP------DGLSVALAFLKERLPD 268 (285)
T ss_dssp -----TCCEEEEEETTCCSSCCH------HHHHHHHHHHHHHCC-
T ss_pred -----CCCEEEEEECCCCCCCCH------HHHHHHHHHHHHHCcC
Confidence 999999999999998742 3456788999999843
No 75
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.78 E-value=2.1e-18 Score=167.90 Aligned_cols=184 Identities=13% Similarity=-0.032 Sum_probs=133.2
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhc------ccccC----CccHHHHHHHH
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKG------GALAK----KQNCFDDFISA 548 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~------~~~~~----~~~~~~D~~~~ 548 (732)
++.| ||++||..+... .|. .+...|. .|+.|+++|.++.+..+..|+.. ..... -....+++.+.
T Consensus 15 ~~~p-vv~lHG~g~~~~--~~~-~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~ 89 (209)
T 3og9_A 15 DLAP-LLLLHSTGGDEH--QLV-EIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTDE 89 (209)
T ss_dssp TSCC-EEEECCTTCCTT--TTH-HHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHHH
T ss_pred CCCC-EEEEeCCCCCHH--HHH-HHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHHH
Confidence 5678 999999766532 333 3456667 89999999976433334445430 00011 11234566666
Q ss_pred HHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHh
Q 004766 549 SEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIK 628 (732)
Q Consensus 549 ~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~ 628 (732)
++.+.++..+|+++++++|+|+||++++.++.++|++++++|+.+|......
T Consensus 90 ~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------------------------- 141 (209)
T 3og9_A 90 VSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF---------------------------- 141 (209)
T ss_dssp HHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC----------------------------
T ss_pred HHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc----------------------------
Confidence 7776666557889999999999999999999999999999999888543100
Q ss_pred cCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCch
Q 004766 629 YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT 708 (732)
Q Consensus 629 ~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 708 (732)
..... ...+|+|++||.+|..||+.++.+++++|++. +.++++++++ +||++..
T Consensus 142 ---~~~~~----------~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~----------~~~~~~~~~~-~gH~~~~-- 195 (209)
T 3og9_A 142 ---EQTVQ----------LDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDS----------GCQLEIYESS-LGHQLTQ-- 195 (209)
T ss_dssp ---CCCCC----------CTTCEEEEEECTTCSSSCHHHHHHHHHHHHHT----------TCEEEEEECS-STTSCCH--
T ss_pred ---ccccc----------ccCCCEEEEcCCCCCccCHHHHHHHHHHHHHc----------CCceEEEEcC-CCCcCCH--
Confidence 00011 15789999999999999999999999999988 8899999997 7999842
Q ss_pred HHHHHHHHHHHHHHHHH
Q 004766 709 QKMIDEAADRYGFMAKM 725 (732)
Q Consensus 709 ~~~~~~~~~~~~fl~~~ 725 (732)
+....+.+||.++
T Consensus 196 ----~~~~~~~~~l~~~ 208 (209)
T 3og9_A 196 ----EEVLAAKKWLTET 208 (209)
T ss_dssp ----HHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhh
Confidence 3345677888764
No 76
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.78 E-value=2e-18 Score=182.23 Aligned_cols=262 Identities=13% Similarity=0.045 Sum_probs=163.2
Q ss_pred CCceEEEEEEEccC--C-CeeEEEEEEEcCCCCCCCCccEEEEEcCCCCcc-CCCCcC----hhHHHHHH-hcCcEEEEE
Q 004766 447 SEFHVHQVFVPSKD--G-STKIPMFIVSKKNIKLDGSHPCLLYGYGGFNIS-VTPSFS----VSRTILMR-HLGAVFCIA 517 (732)
Q Consensus 447 ~~~~~~~~~~~s~d--G-~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~-~~~~~~----~~~~~~l~-~~G~~v~~~ 517 (732)
......++.|.|.| | ++.+.++++.|++. .++.|+|++.||..+.. ..+++. ......|+ ++||+|+++
T Consensus 39 ~~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~--~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~ 116 (377)
T 4ezi_A 39 YDLQLYKINYKTQSPDGNLTIASGLVAMPIHP--VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMP 116 (377)
T ss_dssp CCEEEEEEEEEEECTTSCEEEEEEEEEEESSC--SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEE
T ss_pred CCcEEEEEEEEEECCCCCEEEEEEEEEECCCC--CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEe
Confidence 34577888888765 4 24577999999874 47899999999986421 123221 12233344 599999999
Q ss_pred cccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHH-cCCCCCCcEEEEecChhHHHHHHHHhhCC----C-eeeEEEE
Q 004766 518 NIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLIS-AGYTQSRKLCIEGGSNGGLLVGACINQRP----D-LFGCALA 591 (732)
Q Consensus 518 ~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~~i~i~G~S~GG~l~~~~~~~~p----~-~f~a~v~ 591 (732)
|+||.|+.+...+.-.........+.|.+.++..+.+ .+..+++||+++|+|+||+++++++.++| + .+.++++
T Consensus 117 D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~ 196 (377)
T 4ezi_A 117 DYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAP 196 (377)
T ss_dssp CCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEE
T ss_pred CCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEe
Confidence 9999987664111000000112334555555554444 46667799999999999999999888654 3 5889999
Q ss_pred cCCcccccccccC---CCC---Cc-----------cccccC------CCCCHHHHH------------------------
Q 004766 592 HVGVMDMLRYHKF---TIG---HA-----------WVSDFG------CSEEEEEFY------------------------ 624 (732)
Q Consensus 592 ~~p~~d~~~~~~~---~~~---~~-----------~~~~~g------~p~~~~~~~------------------------ 624 (732)
..|..|+...... ... .. +..+|. ++.-...++
T Consensus 197 ~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (377)
T 4ezi_A 197 GSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIF 276 (377)
T ss_dssp ESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGB
T ss_pred cCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHh
Confidence 9988876432110 000 00 001111 110000000
Q ss_pred ------HHHh-cCc-ccCC-CCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEE
Q 004766 625 ------WLIK-YSP-LHNV-RRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGR 695 (732)
Q Consensus 625 ------~~~~-~sp-~~~~-~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 695 (732)
.+.. .+| +..+ .+ .+....++.+|+||+||.+|..||+.++.++++++++. |. ++++
T Consensus 277 ~~~~~~~~~~~~~p~~~~~l~~---~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~----------G~-v~~~ 342 (377)
T 4ezi_A 277 QPKFSNGIISKTDRNTEILKIN---FNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKY----------SD-FVWI 342 (377)
T ss_dssp CHHHHHHHHTTCSTTHHHHHHH---HCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTT----------CS-CEEE
T ss_pred chhhhhhcccccchHHHHHHHH---hcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhc----------CC-EEEE
Confidence 0000 011 0000 00 00001147899999999999999999999999999987 88 9999
Q ss_pred EeCC--CCCCCCCchHHHHHHHHHHHHHHHHHhCCC
Q 004766 696 IERK--AGHGVGLPTQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 696 ~~~~--~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
++++ .+|.... .......+.||.++++..
T Consensus 343 ~~~~~~~~H~~~~-----~~~~~~~~~wl~~~~~~~ 373 (377)
T 4ezi_A 343 KSVSDALDHVQAH-----PFVLKEQVDFFKQFERQE 373 (377)
T ss_dssp EESCSSCCTTTTH-----HHHHHHHHHHHHHHHTSS
T ss_pred EcCCCCCCccChH-----HHHHHHHHHHHHHhhcch
Confidence 9999 8998642 345667899999988754
No 77
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.78 E-value=8.5e-18 Score=169.87 Aligned_cols=236 Identities=14% Similarity=0.146 Sum_probs=152.2
Q ss_pred eEEEEEE-EccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchh
Q 004766 450 HVHQVFV-PSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE 528 (732)
Q Consensus 450 ~~~~~~~-~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~ 528 (732)
..+.+.+ .+.|| .++.+....+++ ...|+||++||+.+......+. .+..++.++||.|+++|+||.|.....
T Consensus 10 ~~~~~~~~~~~~g-~~l~~~~~~~~~----~~~~~vv~~HG~~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~ 83 (270)
T 3llc_A 10 ETHAITVGQGSDA-RSIAALVRAPAQ----DERPTCIWLGGYRSDMTGTKAL-EMDDLAASLGVGAIRFDYSGHGASGGA 83 (270)
T ss_dssp EEEEEEESSGGGC-EEEEEEEECCSS----TTSCEEEEECCTTCCTTSHHHH-HHHHHHHHHTCEEEEECCTTSTTCCSC
T ss_pred CcceEEEeeccCc-ceEEEEeccCCC----CCCCeEEEECCCccccccchHH-HHHHHHHhCCCcEEEeccccCCCCCCc
Confidence 3444555 66799 999887665542 2479999999987653322222 345667668999999999998876433
Q ss_pred HHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhh---CC---CeeeEEEEcCCcccccccc
Q 004766 529 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ---RP---DLFGCALAHVGVMDMLRYH 602 (732)
Q Consensus 529 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~---~p---~~f~a~v~~~p~~d~~~~~ 602 (732)
.... .-....+|+.++++++ ..+++.++|+|+||.+++.++.+ +| +.++++|+..|..++....
T Consensus 84 ~~~~----~~~~~~~d~~~~~~~l------~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~ 153 (270)
T 3llc_A 84 FRDG----TISRWLEEALAVLDHF------KPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDL 153 (270)
T ss_dssp GGGC----CHHHHHHHHHHHHHHH------CCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHT
T ss_pred cccc----cHHHHHHHHHHHHHHh------ccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhh
Confidence 2111 1111234555555554 25799999999999999999999 99 9999999999987654321
Q ss_pred cCC-CCC----------cc--ccccC-CC--CCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCch
Q 004766 603 KFT-IGH----------AW--VSDFG-CS--EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPL 666 (732)
Q Consensus 603 ~~~-~~~----------~~--~~~~g-~p--~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~ 666 (732)
... ... .+ ...|. .+ .....+...........+.+ +.+|+|+++|.+|..||+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~P~l~i~g~~D~~v~~~ 223 (270)
T 3llc_A 154 IEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMID----------TGCPVHILQGMADPDVPYQ 223 (270)
T ss_dssp TGGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCC----------CCSCEEEEEETTCSSSCHH
T ss_pred hhhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhc----------CCCCEEEEecCCCCCCCHH
Confidence 100 000 00 01111 11 12233334444444444444 7889999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 667 HSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 667 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
++.++++.+. +..+++++++++||.+..... ..+....+.+||.+
T Consensus 224 ~~~~~~~~~~------------~~~~~~~~~~~~gH~~~~~~~-~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 224 HALKLVEHLP------------ADDVVLTLVRDGDHRLSRPQD-IDRMRNAIRAMIEP 268 (270)
T ss_dssp HHHHHHHTSC------------SSSEEEEEETTCCSSCCSHHH-HHHHHHHHHHHHC-
T ss_pred HHHHHHHhcC------------CCCeeEEEeCCCccccccccc-HHHHHHHHHHHhcC
Confidence 8888877654 335899999999997665433 23455556666643
No 78
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.78 E-value=2.2e-19 Score=182.81 Aligned_cols=207 Identities=10% Similarity=0.012 Sum_probs=139.6
Q ss_pred CCCccEEEEEcCCCCcc---CCCCcChhHHHHH----HhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHH
Q 004766 478 DGSHPCLLYGYGGFNIS---VTPSFSVSRTILM----RHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASE 550 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~---~~~~~~~~~~~~l----~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~ 550 (732)
.++.|+||++|||.... ....|. .+...| +++||.|+++|+|++++. .....++|+.++++
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~-~~~~~L~~~a~~~g~~vi~~d~r~~~~~-----------~~~~~~~d~~~~~~ 105 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFN-QLANTIKSMDTESTVCQYSIEYRLSPEI-----------TNPRNLYDAVSNIT 105 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGH-HHHHHHHHHCTTCCEEEEEECCCCTTTS-----------CTTHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCcccCCcCChHHHH-HHHHHHhhhhccCCcEEEEeecccCCCC-----------CCCcHHHHHHHHHH
Confidence 35789999999975332 122333 334555 458999999999987642 12346789999999
Q ss_pred HHHHcCCCCCCcEEEEecChhHHHHHHHHhhC-----------------CCeeeEEEEcCCcccccccccCCCCC-ccc-
Q 004766 551 YLISAGYTQSRKLCIEGGSNGGLLVGACINQR-----------------PDLFGCALAHVGVMDMLRYHKFTIGH-AWV- 611 (732)
Q Consensus 551 ~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-----------------p~~f~a~v~~~p~~d~~~~~~~~~~~-~~~- 611 (732)
+++++ .++++++++|+|+||++++.++.++ |+.++++|+.+|+.++.......... .+.
T Consensus 106 ~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
T 1vkh_A 106 RLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTR 183 (273)
T ss_dssp HHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHH
T ss_pred HHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccHHHHHH
Confidence 99887 5778999999999999999999885 78999999999987764332100000 000
Q ss_pred cccCCCCCHHHHH-HHHhcCcccC-CCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCC
Q 004766 612 SDFGCSEEEEEFY-WLIKYSPLHN-VRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT 689 (732)
Q Consensus 612 ~~~g~p~~~~~~~-~~~~~sp~~~-~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 689 (732)
..++.. .+.+. .....+|+.. ... .+.+|+||+||.+|..||+.++.+++++|+.. +
T Consensus 184 ~~~~~~--~~~~~~~~~~~~~~~~~~~~---------~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~----------~ 242 (273)
T 1vkh_A 184 LAFPDG--IQMYEEEPSRVMPYVKKALS---------RFSIDMHLVHSYSDELLTLRQTNCLISCLQDY----------Q 242 (273)
T ss_dssp HHCTTC--GGGCCCCHHHHHHHHHHHHH---------HHTCEEEEEEETTCSSCCTHHHHHHHHHHHHT----------T
T ss_pred HHhccc--ccchhhcccccChhhhhccc---------ccCCCEEEEecCCcCCCChHHHHHHHHHHHhc----------C
Confidence 011111 00000 0011122110 000 15689999999999999999999999999987 8
Q ss_pred CCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHH
Q 004766 690 NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 722 (732)
Q Consensus 690 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 722 (732)
.++++++++++||...... .+....+.+||
T Consensus 243 ~~~~~~~~~~~gH~~~~~~---~~~~~~i~~fl 272 (273)
T 1vkh_A 243 LSFKLYLDDLGLHNDVYKN---GKVAKYIFDNI 272 (273)
T ss_dssp CCEEEEEECCCSGGGGGGC---HHHHHHHHHTC
T ss_pred CceEEEEeCCCcccccccC---hHHHHHHHHHc
Confidence 8999999999999865433 23444555554
No 79
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.77 E-value=4.2e-18 Score=176.32 Aligned_cols=213 Identities=12% Similarity=0.057 Sum_probs=143.3
Q ss_pred EEEEEE---ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchh
Q 004766 452 HQVFVP---SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE 528 (732)
Q Consensus 452 ~~~~~~---s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~ 528 (732)
..+.+. +.+| .++.++++.|++. ..+.|+||++||+.+... .|...+...+.++||+|+++|+|+.+..+..
T Consensus 25 ~~~~~~~~~~~~~-~~l~~~~~~P~~~--~~~~p~vv~lHG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~ 99 (304)
T 3d0k_A 25 NAIPYLDDDRNAD-RPFTLNTYRPYGY--TPDRPVVVVQHGVLRNGA--DYRDFWIPAADRHKLLIVAPTFSDEIWPGVE 99 (304)
T ss_dssp EEEEECC---CTT-CCEEEEEEECTTC--CTTSCEEEEECCTTCCHH--HHHHHTHHHHHHHTCEEEEEECCTTTSCHHH
T ss_pred ceEEecccCCCCC-ceEEEEEEeCCCC--CCCCcEEEEeCCCCCCHH--HHHHHHHHHHHHCCcEEEEeCCccccCCCcc
Confidence 345565 6788 8999999999864 246799999999877642 2322335666669999999999976332222
Q ss_pred HHhccc--c------cCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCC-eeeEEEEc-CCcccc
Q 004766 529 WHKGGA--L------AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD-LFGCALAH-VGVMDM 598 (732)
Q Consensus 529 ~~~~~~--~------~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-~f~a~v~~-~p~~d~ 598 (732)
|+..+. + ......++|+.+++++|.++..+|++||+|+|+|+||++++.++.++|+ .++++|+. .|+.++
T Consensus 100 ~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~~~ 179 (304)
T 3d0k_A 100 SYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWYTL 179 (304)
T ss_dssp HTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSCCC
T ss_pred ccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCccccc
Confidence 322211 0 0113456889999999998877899999999999999999999999995 67777744 476654
Q ss_pred cccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCC--------------
Q 004766 599 LRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVV-------------- 664 (732)
Q Consensus 599 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~-------------- 664 (732)
..... .| .+|.... ..+|...... ..+|+|++||.+|..+.
T Consensus 180 ~~~~~-----~~--~~~~~~~--------~~~~~~~~~~----------~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~ 234 (304)
T 3d0k_A 180 PTFEH-----RF--PEGLDGV--------GLTEDHLARL----------LAYPMTILAGDQDIATDDPNLPSEPAALRQG 234 (304)
T ss_dssp SSTTS-----BT--TTSSBTT--------TCCHHHHHHH----------HHSCCEEEEETTCCCC--CCSCCSHHHHTTC
T ss_pred CCccc-----cC--ccccCCC--------CCCHHHHHhh----------hcCCEEEEEeCCCCCccccccccChhhhccC
Confidence 32210 11 1121110 0122211111 45799999999999752
Q ss_pred ---chHHHHHHHHHH----HhhcCCCCCCCCCCC--EEEEEeCCCCCCC
Q 004766 665 ---PLHSLKLLATMQ----YVLCTSLENSPQTNP--IIGRIERKAGHGV 704 (732)
Q Consensus 665 ---~~~~~~~~~~l~----~~~~~~~~~~~~~~~--~~~~~~~~~gH~~ 704 (732)
...+.++++.++ +. +.+ ++++++|++||.+
T Consensus 235 ~~~~~~~~~~~~~l~~~a~~~----------g~~~~~~~~~~pg~gH~~ 273 (304)
T 3d0k_A 235 PHRYARARHYYEAGQRAAAQR----------GLPFGWQLQVVPGIGHDG 273 (304)
T ss_dssp SSHHHHHHHHHHHHHHHHHHH----------TCCCCCEEEEETTCCSCH
T ss_pred ccHHHHHHHHHHHHHHHHHhc----------CCCcceEEEEeCCCCCch
Confidence 245667777776 45 666 8999999999987
No 80
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.77 E-value=8.5e-18 Score=186.17 Aligned_cols=240 Identities=12% Similarity=0.071 Sum_probs=162.9
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCc---------------------ChhHHHHHH
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSF---------------------SVSRTILMR 508 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~---------------------~~~~~~~l~ 508 (732)
..+.+.+++.|| ++|.+.++.|++ .++.|+||+.||.... ..+.+ ......+|+
T Consensus 40 ~~~~v~i~~~DG-~~L~a~l~~P~~---~~~~P~vl~~~pyg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la 114 (560)
T 3iii_A 40 MEKDGTVEMRDG-EKLYINIFRPNK---DGKFPVVMSADTYGKD-NKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWV 114 (560)
T ss_dssp EEEEEEEECTTS-CEEEEEEEECSS---SSCEEEEEEEESSCTT-CCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHG
T ss_pred EEEEEEEECCCC-cEEEEEEEecCC---CCCCCEEEEecCCCCC-cccccccccccccccccccccccccccCCCHHHHH
Confidence 557799999999 999999999986 3789999998875433 11111 001135566
Q ss_pred hcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeE
Q 004766 509 HLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGC 588 (732)
Q Consensus 509 ~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a 588 (732)
++||+|+.+|+||.|+++..+. ..+....+|+.++++||.++.++| +||+++|+|+||+++++++.++|+.++|
T Consensus 115 ~~Gy~vv~~D~RG~G~S~G~~~-----~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~a 188 (560)
T 3iii_A 115 PNDYVVVKVALRGSDKSKGVLS-----PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKA 188 (560)
T ss_dssp GGTCEEEEEECTTSTTCCSCBC-----TTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEE
T ss_pred hCCCEEEEEcCCCCCCCCCccc-----cCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEE
Confidence 6999999999999998876553 223467899999999999998887 8999999999999999999999999999
Q ss_pred EEEcCCcccccccccCCCCC-------cccc----ccC-CCCCHHHHH----------HHHhcCcccCCCCCCCCCCCCC
Q 004766 589 ALAHVGVMDMLRYHKFTIGH-------AWVS----DFG-CSEEEEEFY----------WLIKYSPLHNVRRPWEQNPDKP 646 (732)
Q Consensus 589 ~v~~~p~~d~~~~~~~~~~~-------~~~~----~~g-~p~~~~~~~----------~~~~~sp~~~~~~~~~~~~~~~ 646 (732)
+|+.+|+.|+.+...+..+. .|.. .|. .+...+..+ ++++.++ ++.
T Consensus 189 iv~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~--~~~---------- 256 (560)
T 3iii_A 189 MIPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQV--PLS---------- 256 (560)
T ss_dssp EEEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBC--CGG----------
T ss_pred EEecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcchHhhccCC--chh----------
Confidence 99999999976421111110 1110 011 010000111 2233333 233
Q ss_pred CCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 647 FQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 647 ~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
+++.|+|+++|-.|..+....+.+.+++|+. ....+++.+ .+|... .. ..+..+..+.||+++|
T Consensus 257 ~I~vPvl~v~Gw~D~~~~~~g~l~~y~~l~~------------~~k~l~ih~-~~~~~~--~~-~~~~~~~~~~wfD~~L 320 (560)
T 3iii_A 257 QIKTPLLTCASWSTQGLHNRGSFEGFKQAAS------------EEKWLYVHG-RKEWES--YY-ARENLERQKSFFDFYL 320 (560)
T ss_dssp GCCSCEEEEEEGGGTTTTHHHHHHHHHHCCC------------SSEEEEEES-SCHHHH--HH-SHHHHHHHHHHHHHHT
T ss_pred hCCCCEEEeCCcCCCcccchhHHHHHHhccc------------cCcEEEECC-CCCcCc--cc-ChhHHHHHHHHHHHHh
Confidence 3899999999999987777778777776653 233555522 222210 01 1234567889999999
Q ss_pred CC
Q 004766 727 GA 728 (732)
Q Consensus 727 ~~ 728 (732)
+.
T Consensus 321 kG 322 (560)
T 3iii_A 321 KE 322 (560)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 81
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.77 E-value=8e-19 Score=178.76 Aligned_cols=231 Identities=13% Similarity=0.061 Sum_probs=152.2
Q ss_pred eEEEEEEEcc-CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcC---cEEEEEcccCCCCC
Q 004766 450 HVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLG---AVFCIANIRGGGEY 525 (732)
Q Consensus 450 ~~~~~~~~s~-dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G---~~v~~~~~rG~g~~ 525 (732)
..+.+.+.|. +| .++.++++.|+++..++++|+|+++||+........+......+.++.| ++|+.+++|+++.+
T Consensus 17 ~~~~~~~~s~~~g-~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~ 95 (275)
T 2qm0_A 17 NTEQWKMYSKLEG-KEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAF 95 (275)
T ss_dssp TEEEEEEECTTTC-CEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSC
T ss_pred CceEEEEEecCCC-CEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcC
Confidence 5677888886 78 8999999999998666789999999998532110011100111234467 99999999987655
Q ss_pred chh-H-Hhccc-----------------ccCCccHHHHHH--HHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCC
Q 004766 526 GEE-W-HKGGA-----------------LAKKQNCFDDFI--SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD 584 (732)
Q Consensus 526 g~~-~-~~~~~-----------------~~~~~~~~~D~~--~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~ 584 (732)
+.. + ..... ...+...+.|++ +.+.++.++-.+|++|++|+|+|+||++++.++.++|+
T Consensus 96 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~ 175 (275)
T 2qm0_A 96 SGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLN 175 (275)
T ss_dssp CHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGG
T ss_pred cccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCch
Confidence 321 1 01100 001112455554 34555555545788999999999999999999999999
Q ss_pred eeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCC
Q 004766 585 LFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVV 664 (732)
Q Consensus 585 ~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~ 664 (732)
+|+++++.+|.+.+..... . ...+.+ +...+ .. ...+|++|.||..|..++
T Consensus 176 ~f~~~~~~s~~~~~~~~~~--------~-----~~~~~~--~~~~~----~~----------~~~~~~~l~~G~~D~~~~ 226 (275)
T 2qm0_A 176 AFQNYFISSPSIWWNNKSV--------L-----EKEENL--IIELN----NA----------KFETGVFLTVGSLEREHM 226 (275)
T ss_dssp GCSEEEEESCCTTHHHHGG--------G-----GGTTHH--HHHHH----TC----------SSCEEEEEEEETTSCHHH
T ss_pred hhceeEEeCceeeeChHHH--------H-----HHHHHH--Hhhhc----cc----------CCCceEEEEeCCcccchh
Confidence 9999999999864321100 0 000111 11111 11 156899999999999999
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHH
Q 004766 665 PLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 722 (732)
Q Consensus 665 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 722 (732)
+.++.+++++|++. ...|.++.+.++++++|+... ...+...+.||
T Consensus 227 ~~~~~~~~~~L~~~-------~~~g~~~~~~~~~g~~H~~~~-----~~~l~~~l~~l 272 (275)
T 2qm0_A 227 VVGANELSERLLQV-------NHDKLKFKFYEAEGENHASVV-----PTSLSKGLRFI 272 (275)
T ss_dssp HHHHHHHHHHHHHC-------CCTTEEEEEEEETTCCTTTHH-----HHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhc-------ccCCceEEEEECCCCCccccH-----HHHHHHHHHHH
Confidence 99999999999532 112889999999999997531 22334455665
No 82
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.77 E-value=7.7e-18 Score=166.79 Aligned_cols=220 Identities=14% Similarity=-0.001 Sum_probs=153.0
Q ss_pred EEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcc--
Q 004766 456 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGG-- 533 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~-- 533 (732)
+...+| . ++.++.|.+ +.|+||++||..+... .|.. +...|+++||.|+++|+||.|.....+....
T Consensus 7 ~~~~~g-~--~~~~~~~~~-----~~~~vv~~hG~~~~~~--~~~~-~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~ 75 (238)
T 1ufo_A 7 RLTLAG-L--SVLARIPEA-----PKALLLALHGLQGSKE--HILA-LLPGYAERGFLLLAFDAPRHGEREGPPPSSKSP 75 (238)
T ss_dssp EEEETT-E--EEEEEEESS-----CCEEEEEECCTTCCHH--HHHH-TSTTTGGGTEEEEECCCTTSTTSSCCCCCTTST
T ss_pred ccccCC-E--EEEEEecCC-----CccEEEEECCCcccch--HHHH-HHHHHHhCCCEEEEecCCCCccCCCCCCccccc
Confidence 334466 4 455566653 6799999999876532 2222 2344555899999999999876433211100
Q ss_pred -----cccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCC
Q 004766 534 -----ALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGH 608 (732)
Q Consensus 534 -----~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~ 608 (732)
....-....+|+.++++++.+.+. ++++++|+|+||.+++.++.++|+.++++++..|..... ...
T Consensus 76 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~-~~~----- 146 (238)
T 1ufo_A 76 RYVEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMK-LPQ----- 146 (238)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCC-CCT-----
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccch-hhh-----
Confidence 000012346788889999887654 799999999999999999999999998888776643211 000
Q ss_pred ccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCC-CCeEEEEeeCCCCCCCchHHHHHHHHHH-HhhcCCCCCC
Q 004766 609 AWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQ-YPSTLLLTADHDDRVVPLHSLKLLATMQ-YVLCTSLENS 686 (732)
Q Consensus 609 ~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~-~~p~Li~~g~~D~~v~~~~~~~~~~~l~-~~~~~~~~~~ 686 (732)
..+..|. ....+..+++...+.. + .+|+|+++|.+|..||+.++.++++++. ..
T Consensus 147 ---~~~~~~~---~~~~~~~~~~~~~~~~----------~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-------- 202 (238)
T 1ufo_A 147 ---GQVVEDP---GVLALYQAPPATRGEA----------YGGVPLLHLHGSRDHIVPLARMEKTLEALRPHY-------- 202 (238)
T ss_dssp ---TCCCCCH---HHHHHHHSCGGGCGGG----------GTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGC--------
T ss_pred ---hhccCCc---ccchhhcCChhhhhhh----------ccCCcEEEEECCCCCccCcHHHHHHHHHHhhcC--------
Confidence 0112221 2445667777777665 4 7899999999999999999999999998 65
Q ss_pred CCCC-CEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 687 PQTN-PIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 687 ~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
+. ++++++++++||.+.. +....+.+||.++|+
T Consensus 203 --~~~~~~~~~~~~~~H~~~~------~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 203 --PEGRLARFVEEGAGHTLTP------LMARVGLAFLEHWLE 236 (238)
T ss_dssp --TTCCEEEEEETTCCSSCCH------HHHHHHHHHHHHHHH
T ss_pred --CCCceEEEEeCCCCcccHH------HHHHHHHHHHHHHHh
Confidence 65 7899999999998753 234467788888764
No 83
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.77 E-value=4.1e-17 Score=167.48 Aligned_cols=237 Identities=12% Similarity=0.041 Sum_probs=160.3
Q ss_pred EEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccc
Q 004766 455 FVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGA 534 (732)
Q Consensus 455 ~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~ 534 (732)
.+.+.|| .+|.+.++.|++ ++.|+||++||..+... .|.. +...|.++||.|+++|+||.|....... .
T Consensus 21 ~~~~~~g-~~l~~~~~~~~~----~~~~~vv~~hG~~~~~~--~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~~~~---~ 89 (303)
T 3pe6_A 21 HLVNADG-QYLFCRYWAPTG----TPKALIFVSHGAGEHSG--RYEE-LARMLMGLDLLVFAHDHVGHGQSEGERM---V 89 (303)
T ss_dssp EEECTTS-CEEEEEEECCSS----CCSEEEEEECCTTCCGG--GGHH-HHHHHHHTTEEEEEECCTTSTTSCSSTT---C
T ss_pred eEecCCC-eEEEEEEeccCC----CCCeEEEEECCCCchhh--HHHH-HHHHHHhCCCcEEEeCCCCCCCCCCCCC---C
Confidence 5677899 999999988764 46799999999876543 3443 4455665899999999999886542210 1
Q ss_pred ccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc------------
Q 004766 535 LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH------------ 602 (732)
Q Consensus 535 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~------------ 602 (732)
...-....+|+.++++++..+ .+.+++.++|+|+||++++.++.++|++++++|+..|........
T Consensus 90 ~~~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 167 (303)
T 3pe6_A 90 VSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVL 167 (303)
T ss_dssp CSSTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHH
Confidence 112233478889999998876 345699999999999999999999999999999999976542110
Q ss_pred ----cCCCCCccccccCCCCCHHHHHHHHhcCcc----------------------cCCCCCCCCCCCCCCCCCeEEEEe
Q 004766 603 ----KFTIGHAWVSDFGCSEEEEEFYWLIKYSPL----------------------HNVRRPWEQNPDKPFQYPSTLLLT 656 (732)
Q Consensus 603 ----~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~----------------------~~~~~~~~~~~~~~~~~~p~Li~~ 656 (732)
...........+. ..+......+.. .+. ..+. .+..|+|+++
T Consensus 168 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~i~~P~l~i~ 235 (303)
T 3pe6_A 168 NSVLPNLSSGPIDSSVL-SRNKTEVDIYNS-DPLICRAGLKVCFGIQLLNAVSRVERALP----------KLTVPFLLLQ 235 (303)
T ss_dssp HTTCCSCCCCCCCGGGT-CSCHHHHHHHHT-CTTSCCSCCCHHHHHHHHHHHHHHHHHGG----------GCCSCEEEEE
T ss_pred HHhcccccCCccchhhh-hcchhHHHHhcc-CccccccchhhhhHHHHHHHHHHHHHHhh----------cCCCCEEEEe
Confidence 0000000000010 011222211111 111 1122 2688999999
Q ss_pred eCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCch-HHHHHHHHHHHHHHHHHhCC
Q 004766 657 ADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT-QKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 657 g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~~fl~~~l~~ 728 (732)
|.+|..|++..+.++++.+. +..+.+++++++||...... ....+....+++||.+++..
T Consensus 236 g~~D~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~ 296 (303)
T 3pe6_A 236 GSADRLCDSKGAYLLMELAK------------SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 296 (303)
T ss_dssp ETTCSSBCHHHHHHHHHHCC------------CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC-
T ss_pred eCCCCCCChHHHHHHHHhcc------------cCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCC
Confidence 99999999998888877664 23578999999999976432 22346667789999988753
No 84
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.76 E-value=2.1e-16 Score=169.21 Aligned_cols=260 Identities=13% Similarity=0.084 Sum_probs=168.2
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccccccee-eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFK-FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~-~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
.++|||||++|||+.+.+|. .+||++|+++|+....+..... ...++|||||+.|+|+..+
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~--~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---------------- 101 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGP--WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---------------- 101 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSS--CEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT----------------
T ss_pred CccCCCCCCEEEEEEcCCCC--ceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC----------------
Confidence 37899999999999876554 5899999999986554432221 1367999999999998632
Q ss_pred CcccEEEEEECCCCCCCCeEEEecCCCCeeEE--EeEEecCCcEEEEEEecC-----------------CcceEEEEEEe
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWKDPEHPKYIF--SGHVTEDGQYLVMCIEEN-----------------CDPVNKVYYCD 275 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~--~~~~SpDg~~l~~~~~~~-----------------~~~~~~l~~~d 275 (732)
..|+++++.++... .++..+. .+.. ....+|||+.++...... ......|+++|
T Consensus 102 ---~~l~~~d~~~g~~~--~~~~~~~--~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 174 (388)
T 3pe7_A 102 ---RNLMRVDLATLEEN--VVYQVPA--EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVD 174 (388)
T ss_dssp ---TEEEEEETTTCCEE--EEEECCT--TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEE
T ss_pred ---CeEEEEECCCCcce--eeeechh--hcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEE
Confidence 36999999886533 4555443 2322 234599999987654221 11247899999
Q ss_pred CCCCCCCcccccccCCCCCcEEeeeccc-ceEEEEEe-cCCeEEEEeCCCC--CCceEEEEeCCCCCCceEeccCCCCCc
Q 004766 276 LSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIAN-DDTVFTFLTNKDA--PKYKIIRVDLKEPNDWFEVIPEAERDV 351 (732)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~-dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~ 351 (732)
+++++ .+.+..... .....|+| ||+.|+|.++... ...+|+.+|++++. .+.+..+.....
T Consensus 175 ~~~g~--------------~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~ 239 (388)
T 3pe7_A 175 LKTGE--------------STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGES 239 (388)
T ss_dssp TTTCC--------------EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEE
T ss_pred CCCCc--------------eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcc
Confidence 98753 334443222 22346999 9999998886421 25589999988765 455655442234
Q ss_pred eeEEEEecCC-EEEEEEecCCee--EEEEEeCCCCceeeecccccce------eeEeecccCCcEEEEEEec-----CCC
Q 004766 352 LESATAVNLN-QMIVSYLSDVKY--VLQIRDLKNGSLLHQLPIEIGS------VNAISARREDSVVFISFTS-----FLI 417 (732)
Q Consensus 352 l~~~~~~~~~-~l~~~~~~~g~~--~l~~~d~~~g~~~~~l~~~~g~------v~~~~~s~d~~~l~~~~ss-----~~~ 417 (732)
+..+.|++++ .|++....++.. .|+++|+++|+. +.+....+. .....++|||+.++++.+. ...
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 318 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN 318 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-EEEEEECCEEEEEECTTSSEEEEEECCC------------CC
T ss_pred cccceECCCCCEEEEEecCCCCCcceEEEEecCCCce-EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCC
Confidence 6678898864 476666665544 499999998875 444321111 1123467899888776532 245
Q ss_pred CceEEEEECCCCCCceEEEEe
Q 004766 418 PGIVYQCNLKTETPEMKIFRE 438 (732)
Q Consensus 418 p~~~y~~d~~~~~~~~~~l~~ 438 (732)
...+|++|+.+++ .+.+..
T Consensus 319 ~~~i~~~d~~~~~--~~~l~~ 337 (388)
T 3pe7_A 319 DPFLYVFNMKNGT--QHRVAR 337 (388)
T ss_dssp CCEEEEEETTTTE--EEEEEE
T ss_pred CCEEEEEeccCCc--eEEecc
Confidence 6789999999884 555554
No 85
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.76 E-value=6.6e-18 Score=172.55 Aligned_cols=244 Identities=11% Similarity=0.024 Sum_probs=158.2
Q ss_pred eEEEEEEEcc-CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcCh--hHHHHHHhcCcEEEEEcccCCCCCc
Q 004766 450 HVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSV--SRTILMRHLGAVFCIANIRGGGEYG 526 (732)
Q Consensus 450 ~~~~~~~~s~-dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~rG~g~~g 526 (732)
.++.+.+.|. .| .++++++ |++. + |+||++||..+......|.. ....++.++|++|+++|.+|++.|.
T Consensus 5 ~~~~~~~~s~~~~-~~~~v~~--~p~~---~--~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~ 76 (280)
T 1dqz_A 5 PVEYLQVPSASMG-RDIKVQF--QGGG---P--HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYT 76 (280)
T ss_dssp CEEEEEEEETTTT-EEEEEEE--ECCS---S--SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTS
T ss_pred eEEEEEEECcccC-ceeEEEE--cCCC---C--CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCcccc
Confidence 3455666654 56 7777763 3332 1 58999999853111223322 1234566689999999988655442
Q ss_pred hhHHhcccc--cCCccHHHHHH--HHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc
Q 004766 527 EEWHKGGAL--AKKQNCFDDFI--SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH 602 (732)
Q Consensus 527 ~~~~~~~~~--~~~~~~~~D~~--~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~ 602 (732)
. |...... ......+++++ +++.++.++--+++++++|+|+||||++++.++.++|++|+++|+.+|.+++....
T Consensus 77 ~-~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~ 155 (280)
T 1dqz_A 77 D-WYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESW 155 (280)
T ss_dssp B-CSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTT
T ss_pred C-CCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcc
Confidence 1 1111000 00123444543 34444444223577899999999999999999999999999999999988754310
Q ss_pred -----c----CCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCC------------
Q 004766 603 -----K----FTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDD------------ 661 (732)
Q Consensus 603 -----~----~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~------------ 661 (732)
. ......+...||+|..+ .+.+.+|..++.+.. ...+|++|.||..|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~p~~~~~~l~-------~~~~~~~l~~G~~D~~~~~~~~~~~~~ 224 (280)
T 1dqz_A 156 WPTLIGLAMNDSGGYNANSMWGPSSDP----AWKRNDPMVQIPRLV-------ANNTRIWVYCGNGTPSDLGGDNIPAKF 224 (280)
T ss_dssp HHHHHHHHHHHTTSCCHHHHHCSTTSH----HHHHTCTTTTHHHHH-------HHTCEEEEECCCSCCCTTCCCSHHHHH
T ss_pred hhhhHHHHhhhccCcCHHHhcCCCCch----hhhhcCHHHHHHHHH-------hcCCeEEEEeCCCCcccccccccchhh
Confidence 0 00011122346666433 245668876654300 024799999999997
Q ss_pred --CCCchHHHHHHHHHHHhhcCCCCCCCCC-CCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 662 --RVVPLHSLKLLATMQYVLCTSLENSPQT-NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 662 --~v~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
.+++.++++++++|+++ | .++.+.++++++|.... +...+...+.||.+.||
T Consensus 225 ~e~~~~~~~~~~~~~L~~~----------g~~~~~~~~~~~g~H~~~~----w~~~l~~~l~~l~~~l~ 279 (280)
T 1dqz_A 225 LEGLTLRTNQTFRDTYAAD----------GGRNGVFNFPPNGTHSWPY----WNEQLVAMKADIQHVLN 279 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHT----------TCCSEEEECCSCCCSSHHH----HHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC----------CCCceEEEecCCCccChHH----HHHHHHHHHHHHHHHhC
Confidence 57889999999999988 8 99999999999997522 34556678889988876
No 86
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.75 E-value=2.1e-17 Score=163.34 Aligned_cols=201 Identities=12% Similarity=0.057 Sum_probs=138.6
Q ss_pred EEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCc------hhHHh-cc---cccCC
Q 004766 469 IVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG------EEWHK-GG---ALAKK 538 (732)
Q Consensus 469 ~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g------~~~~~-~~---~~~~~ 538 (732)
++.|+. .++.|+||++||..+... .|. .+...|.++||.|+++|.+|.+... ..|++ .+ .....
T Consensus 14 ~~~p~~---~~~~~~vv~lHG~~~~~~--~~~-~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~ 87 (232)
T 1fj2_A 14 AIVPAA---RKATAAVIFLHGLGDTGH--GWA-EAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQED 87 (232)
T ss_dssp EEECCS---SCCSEEEEEECCSSSCHH--HHH-HHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBC
T ss_pred cccCCC---CCCCceEEEEecCCCccc--hHH-HHHHHHhcCCcEEEecCCCccccccccccccccccccccCCcccccc
Confidence 556654 357899999999876532 232 2345556579999999555411100 00100 00 00011
Q ss_pred cc----HHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCcccccc
Q 004766 539 QN----CFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDF 614 (732)
Q Consensus 539 ~~----~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~ 614 (732)
.. ..+|+.++++++.+ ..+|+++++++|+|+||.+++.++.++|++++++|+.+|..+......
T Consensus 88 ~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~----------- 155 (232)
T 1fj2_A 88 ESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFP----------- 155 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSC-----------
T ss_pred cHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcccc-----------
Confidence 12 24556666666665 346789999999999999999999999999999999999765432110
Q ss_pred CCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCC--E
Q 004766 615 GCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNP--I 692 (732)
Q Consensus 615 g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~ 692 (732)
. ...... .+.+|+|+++|.+|..|++.++.+++++|++. +.+ +
T Consensus 156 ---~------------~~~~~~----------~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~----------~~~~~~ 200 (232)
T 1fj2_A 156 ---Q------------GPIGGA----------NRDISILQCHGDCDPLVPLMFGSLTVEKLKTL----------VNPANV 200 (232)
T ss_dssp ---S------------SCCCST----------TTTCCEEEEEETTCSSSCHHHHHHHHHHHHHH----------SCGGGE
T ss_pred ---c------------cccccc----------cCCCCEEEEecCCCccCCHHHHHHHHHHHHHh----------CCCCce
Confidence 0 001122 26789999999999999999999999999987 644 9
Q ss_pred EEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 693 IGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 693 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
++++++++||.+. .+....+.+||.++|..
T Consensus 201 ~~~~~~~~~H~~~------~~~~~~i~~~l~~~l~~ 230 (232)
T 1fj2_A 201 TFKTYEGMMHSSC------QQEMMDVKQFIDKLLPP 230 (232)
T ss_dssp EEEEETTCCSSCC------HHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCCcccC------HHHHHHHHHHHHHhcCC
Confidence 9999999999983 23346789999998864
No 87
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.75 E-value=5.9e-16 Score=180.89 Aligned_cols=301 Identities=13% Similarity=0.068 Sum_probs=194.5
Q ss_pred CCCCcEE--eCCEEEEEEE-cCCCCeeEEEEEeCCCCCceEEeCCCCcCCC------------------CCEEEEeEEEC
Q 004766 82 RYDAPFK--RGNKYFYFHN-TGLQPQSVLYVQDSLDAKAKVLLDPNTLSDD------------------GTAALIKVSVS 140 (732)
Q Consensus 82 ~~~~p~~--~g~~~~~~~~-~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~------------------~~~~~~~~~~S 140 (732)
.+..+.+ +|.+++|... +++.....||+.+..+++.+.+++.....++ +...+..++||
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 3444444 6777888776 5444456788888766776677765332210 00235688999
Q ss_pred CCCcEEEEEEeccCCceEEEEEEECCCC---ceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcc
Q 004766 141 EDAKYLAYALSYSGSDWATIKLMRIEDQ---IVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLY 217 (732)
Q Consensus 141 PDG~~la~~~~~~G~e~~~i~v~dl~~g---~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~ 217 (732)
|||++|+|+.. .+|++||+.++ +.............++|||||+.|+|++.
T Consensus 118 pDg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-------------------- 171 (741)
T 2ecf_A 118 PDAQRLLFPLG------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-------------------- 171 (741)
T ss_dssp TTSSEEEEEET------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET--------------------
T ss_pred CCCCEEEEEeC------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC--------------------
Confidence 99999999974 48999999998 64433322223478999999999999852
Q ss_pred cEEEEEECCCCCCCCeEEEecCCCCe--------------eEEEeEEecCCcEEEEEEecCCc-----------------
Q 004766 218 HEFYYHFLGTKQSEDILCWKDPEHPK--------------YIFSGHVTEDGQYLVMCIEENCD----------------- 266 (732)
Q Consensus 218 ~~v~~~~lgt~~~~~~~v~~~~~~~~--------------~~~~~~~SpDg~~l~~~~~~~~~----------------- 266 (732)
..|+++++.++... .+........ ....++|||||++|++...+...
T Consensus 172 ~~i~~~d~~~g~~~--~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~ 249 (741)
T 2ecf_A 172 RNLWVIDLASGRQM--QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVI 249 (741)
T ss_dssp TEEEEEETTTTEEE--ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEE
T ss_pred CcEEEEecCCCCEE--EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccce
Confidence 26999998765321 1211111100 02468999999999998765321
Q ss_pred -----------ceEEEEEEeCCC-CCCCcccccccCCCCCcEEeeec--cc--ceEEEEEecCCeEEEEeC-CCCCCceE
Q 004766 267 -----------PVNKVYYCDLSA-LPEGLEGFKKRDGLLPFVKLIDG--FD--AQYEVIANDDTVFTFLTN-KDAPKYKI 329 (732)
Q Consensus 267 -----------~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~l~~~--~~--~~~~~~s~dg~~l~~~s~-~~~~~~~l 329 (732)
....|+++|+.+ +. ...+... .. .....| |||+.|++.+. +......|
T Consensus 250 ~~~~~~~g~~~~~~~l~~~d~~~~~~--------------~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i 314 (741)
T 2ecf_A 250 EQRYPAAGDANVQVKLGVISPAEQAQ--------------TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDL 314 (741)
T ss_dssp EEECCBTTSCCCEEEEEEECSSTTCC--------------CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEE
T ss_pred EeecCCCCCCCCeeEEEEEECCCCCc--------------eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEE
Confidence 134799999877 53 1222211 11 112358 99999998764 44456789
Q ss_pred EEEeCCCCCCceEeccCCCCC---ceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEe-ecccCC
Q 004766 330 IRVDLKEPNDWFEVIPEAERD---VLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAI-SARRED 405 (732)
Q Consensus 330 ~~~d~~~~~~~~~l~~~~~~~---~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~-~~s~d~ 405 (732)
+++|++++. ...++...... .+..+.|++++.+++....++..+|+.++++ |+ .+.++.....+..+ .+++|+
T Consensus 315 ~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~-~~-~~~l~~~~~~v~~~~~~s~dg 391 (741)
T 2ecf_A 315 VEVTLASNQ-QRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSK-GK-AAALTHGNWSVDELLAVDEKA 391 (741)
T ss_dssp EEEETTTCC-EEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSS-SC-EEESCCSSSCEEEEEEEETTT
T ss_pred EEEECCCCc-eEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCC-CC-eeeeeecceEEEeEeEEeCCC
Confidence 999999887 44444432222 3356788887778888888888899999986 54 57777555555555 588999
Q ss_pred cEEEEEEecCCC--CceEEEEECCCC
Q 004766 406 SVVFISFTSFLI--PGIVYQCNLKTE 429 (732)
Q Consensus 406 ~~l~~~~ss~~~--p~~~y~~d~~~~ 429 (732)
+.++++.+. .. ...+|.++..++
T Consensus 392 ~~l~~~~~~-~~~~~~~l~~~~~~g~ 416 (741)
T 2ecf_A 392 GLAYFRAGI-ESARESQIYAVPLQGG 416 (741)
T ss_dssp TEEEEEECS-SCTTCBEEEEEETTCC
T ss_pred CEEEEEEeC-CCCceEEEEEEEcCCC
Confidence 988766543 33 345777776444
No 88
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.75 E-value=5e-16 Score=181.25 Aligned_cols=303 Identities=10% Similarity=0.048 Sum_probs=184.7
Q ss_pred CcEE-eCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccC----CceEE
Q 004766 85 APFK-RGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSG----SDWAT 159 (732)
Q Consensus 85 ~p~~-~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G----~e~~~ 159 (732)
.+.+ .++.+++.. + . .|++-+..+++.++++....+..- .....+++|||||++|||..+... +....
T Consensus 21 ~~~w~~dg~~~~~~-~---~--~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ-E---N--NILVFNAEYGNSSVFLENSTFDEF-GHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CEEECSSSEEEEEE-T---T--EEEEEETTTCCEEEEECTTTTTTC-CSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccEECCCCcEEEEc-C---C--cEEEEECCCCceEEEEechhhhhh-cccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 4444 344555553 2 2 356556556666777766443211 111235899999999999986321 22368
Q ss_pred EEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecC
Q 004766 160 IKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDP 239 (732)
Q Consensus 160 i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~ 239 (732)
++++|+++|+..+.+........++|||||+.|+|++. ..||++++.++... .+....
T Consensus 94 ~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~--------------------~~i~~~~~~~~~~~--~lt~~g 151 (740)
T 4a5s_A 94 YDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN--------------------NDIYVKIEPNLPSY--RITWTG 151 (740)
T ss_dssp EEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEET--------------------TEEEEESSTTSCCE--ECCSCC
T ss_pred EEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEEC--------------------CeEEEEECCCCceE--EEcCCC
Confidence 99999999986554332223478999999999999852 25888888765432 111111
Q ss_pred CCC----------------eeEEEeEEecCCcEEEEEEecCC-------------------------------cceEEEE
Q 004766 240 EHP----------------KYIFSGHVTEDGQYLVMCIEENC-------------------------------DPVNKVY 272 (732)
Q Consensus 240 ~~~----------------~~~~~~~~SpDg~~l~~~~~~~~-------------------------------~~~~~l~ 272 (732)
... .....++|||||++|++.+.+.. .....|+
T Consensus 152 ~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~ 231 (740)
T 4a5s_A 152 KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFF 231 (740)
T ss_dssp BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEE
T ss_pred CccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEE
Confidence 000 00124889999999999864432 1123688
Q ss_pred EEeCCC---CCCCcccccccCCCCCcEEeeec-----ccc--eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC----
Q 004766 273 YCDLSA---LPEGLEGFKKRDGLLPFVKLIDG-----FDA--QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN---- 338 (732)
Q Consensus 273 ~~d~~~---~~~~~~~~~~~~~~~~~~~l~~~-----~~~--~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~---- 338 (732)
++|+++ +.. .....+... .+. ....|||||+.+++..++......|+++|+++++
T Consensus 232 v~d~~~~~~~~~-----------~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~ 300 (740)
T 4a5s_A 232 VVNTDSLSSVTN-----------ATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWN 300 (740)
T ss_dssp EEETTSCCSSSC-----------CCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEE
T ss_pred EEECCCCCCCCc-----------ceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccc
Confidence 888877 421 012233221 111 1125999999888888877667789999998765
Q ss_pred --CceEeccCCCCCce-----eEEEEecCC-EEE-EEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEE
Q 004766 339 --DWFEVIPEAERDVL-----ESATAVNLN-QMI-VSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVF 409 (732)
Q Consensus 339 --~~~~l~~~~~~~~l-----~~~~~~~~~-~l~-~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~ 409 (732)
....++.+.....+ ..+.|++|+ .++ +...++|..+|+++++++++. +.|+.....+..+. .+|++.++
T Consensus 301 ~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~-~~lT~g~~~v~~~~-~~d~~~i~ 378 (740)
T 4a5s_A 301 CLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC-TFITKGTWEVIGIE-ALTSDYLY 378 (740)
T ss_dssp ECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC-EESCCSSSCEEEEE-EECSSEEE
T ss_pred eeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce-EecccCCEEEEEEE-EEeCCEEE
Confidence 12223222222222 357788764 555 666788889999999985554 77875554454432 25578887
Q ss_pred EEEec---CCCCceEEEEECCCC
Q 004766 410 ISFTS---FLIPGIVYQCNLKTE 429 (732)
Q Consensus 410 ~~~ss---~~~p~~~y~~d~~~~ 429 (732)
|..+. -..-..+|.+++.++
T Consensus 379 f~~~~~~~~~~~~~ly~v~~~g~ 401 (740)
T 4a5s_A 379 YISNEYKGMPGGRNLYKIQLIDY 401 (740)
T ss_dssp EEESCGGGCTTCBEEEEEETTEE
T ss_pred EEEecCCCCCceeEEEEEECCCC
Confidence 76654 122357888888765
No 89
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.75 E-value=9.7e-16 Score=165.81 Aligned_cols=245 Identities=13% Similarity=0.118 Sum_probs=169.9
Q ss_pred CCCcEEEEEEeccCCc-eEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccE
Q 004766 141 EDAKYLAYALSYSGSD-WATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHE 219 (732)
Q Consensus 141 PDG~~la~~~~~~G~e-~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (732)
+.+++|+|+....+.+ ..+|++||++++..............++|||||+.|+|++.+. ....
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~----------------~~~~ 204 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES----------------GRSA 204 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTT----------------SSCE
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecC----------------CCcE
Confidence 4588999998754332 2699999998765433222222357899999999999997542 2357
Q ss_pred EEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEee
Q 004766 220 FYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI 299 (732)
Q Consensus 220 v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~ 299 (732)
|++|++.++... .+... ......++|||||++|++...... ...||++|+.++. ...+.
T Consensus 205 i~~~d~~tg~~~--~l~~~---~~~~~~~~~spdg~~la~~~~~~g--~~~i~~~d~~~~~--------------~~~l~ 263 (415)
T 2hqs_A 205 LVIQTLANGAVR--QVASF---PRHNGAPAFSPDGSKLAFALSKTG--SLNLYVMDLASGQ--------------IRQVT 263 (415)
T ss_dssp EEEEETTTCCEE--EEECC---SSCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTTCC--------------EEECC
T ss_pred EEEEECCCCcEE--EeecC---CCcccCEEEcCCCCEEEEEEecCC--CceEEEEECCCCC--------------EEeCc
Confidence 999999876532 33322 234568999999999998876443 4679999998743 23333
Q ss_pred ecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEEEEEecCCeeEEEE
Q 004766 300 DGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQI 377 (732)
Q Consensus 300 ~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~~~~~~~g~~~l~~ 377 (732)
..... ....|+|||+.|++.+++++ ..+|+.+|+.++. ...+..+. ..+..+.|++++ .|++....++...|++
T Consensus 264 ~~~~~~~~~~~spdg~~l~~~s~~~g-~~~i~~~d~~~~~-~~~l~~~~--~~~~~~~~spdG~~l~~~~~~~g~~~i~~ 339 (415)
T 2hqs_A 264 DGRSNNTEPTWFPDSQNLAFTSDQAG-RPQVYKVNINGGA-PQRITWEG--SQNQDADVSSDGKFMVMVSSNGGQQHIAK 339 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTSSC-CEECCCSS--SEEEEEEECTTSSEEEEEEECSSCEEEEE
T ss_pred CCCCcccceEECCCCCEEEEEECCCC-CcEEEEEECCCCC-EEEEecCC--CcccCeEECCCCCEEEEEECcCCceEEEE
Confidence 32222 22369999999999887543 4689999998876 45554443 456778898864 5666666666789999
Q ss_pred EeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 378 RDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 378 ~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
||+++|+. +.+.... .+..+.++||++.+++.... .....+|.+|+.++
T Consensus 340 ~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~-~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 340 QDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQ-GMGSVLNLVSTDGR 388 (415)
T ss_dssp EETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEEE-TTEEEEEEEETTSC
T ss_pred EECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEcC-CCccEEEEEECCCC
Confidence 99987775 5555433 56678899999977765543 33458999998765
No 90
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.75 E-value=1.7e-17 Score=164.96 Aligned_cols=195 Identities=10% Similarity=0.021 Sum_probs=135.9
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhc-----CcEEEEEcccCC------CCCchhHHhcc----cccCCccHHH
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHL-----GAVFCIANIRGG------GEYGEEWHKGG----ALAKKQNCFD 543 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~-----G~~v~~~~~rG~------g~~g~~~~~~~----~~~~~~~~~~ 543 (732)
++.|+||++||..+... .|.. +...|..+ |+.|++++.++. +..+..|+... ........++
T Consensus 21 ~~~p~vv~lHG~g~~~~--~~~~-~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 97 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQ--GLRM-WIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESID 97 (239)
T ss_dssp CCCEEEEEECCTTCCHH--HHHH-HHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHH
T ss_pred CCCcEEEEEecCCCchh--hHHH-HHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHH
Confidence 57899999999765432 2322 23334433 799999998643 33444554411 1111223455
Q ss_pred HHHHHHHHHHHc---CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCH
Q 004766 544 DFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEE 620 (732)
Q Consensus 544 D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~ 620 (732)
++...+..+++. ..+++++++|+|+|+||++++.++.++|+.++++|+.+|+.+....
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------------------- 158 (239)
T 3u0v_A 98 VMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA------------------- 158 (239)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH-------------------
T ss_pred HHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH-------------------
Confidence 555555555433 3368899999999999999999999999999999999887643110
Q ss_pred HHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCC
Q 004766 621 EEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKA 700 (732)
Q Consensus 621 ~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (732)
.+..+. .. . ...||+|++||.+|..||+.++.+++++|++. +.++++++++++
T Consensus 159 -~~~~~~------~~-~---------~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~----------~~~~~~~~~~g~ 211 (239)
T 3u0v_A 159 -VYQALQ------KS-N---------GVLPELFQCHGTADELVLHSWAEETNSMLKSL----------GVTTKFHSFPNV 211 (239)
T ss_dssp -HHHHHH------HC-C---------SCCCCEEEEEETTCSSSCHHHHHHHHHHHHHT----------TCCEEEEEETTC
T ss_pred -HHHHHH------hh-c---------cCCCCEEEEeeCCCCccCHHHHHHHHHHHHHc----------CCcEEEEEeCCC
Confidence 111111 11 1 13456999999999999999999999999987 888999999999
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 701 GHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 701 gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
||.+. .+....+.+||.++|..
T Consensus 212 ~H~~~------~~~~~~~~~~l~~~l~~ 233 (239)
T 3u0v_A 212 YHELS------KTELDILKLWILTKLPG 233 (239)
T ss_dssp CSSCC------HHHHHHHHHHHHHHCC-
T ss_pred CCcCC------HHHHHHHHHHHHHhCCC
Confidence 99986 23456788999998864
No 91
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.74 E-value=2.2e-17 Score=162.38 Aligned_cols=197 Identities=17% Similarity=0.131 Sum_probs=140.5
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccccc-CC---
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALA-KK--- 538 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~-~~--- 538 (732)
..+...+..|.. ...|+||++||+.+... .|. .+...|+ .||.|+++|.++....|..|+...... ..
T Consensus 16 ~~l~~~~~~~~~----~~~p~vv~lHG~g~~~~--~~~-~~~~~l~-~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~ 87 (223)
T 3b5e_A 16 LAFPYRLLGAGK----ESRECLFLLHGSGVDET--TLV-PLARRIA-PTATLVAARGRIPQEDGFRWFERIDPTRFEQKS 87 (223)
T ss_dssp SSSCEEEESTTS----SCCCEEEEECCTTBCTT--TTH-HHHHHHC-TTSEEEEECCSEEETTEEESSCEEETTEECHHH
T ss_pred CCceEEEeCCCC----CCCCEEEEEecCCCCHH--HHH-HHHHhcC-CCceEEEeCCCCCcCCccccccccCCCcccHHH
Confidence 566666554432 23499999999876543 333 3455667 599999999887433255554322110 11
Q ss_pred -ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCC
Q 004766 539 -QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCS 617 (732)
Q Consensus 539 -~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p 617 (732)
....+|+.+.++++.++.-+++++++++|+|+||.+++.++.++|++++++|+.+|...... +
T Consensus 88 ~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~----------------~ 151 (223)
T 3b5e_A 88 ILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH----------------V 151 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS----------------C
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc----------------c
Confidence 12356667777777766346889999999999999999999999999999999988653200 0
Q ss_pred CCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEe
Q 004766 618 EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIE 697 (732)
Q Consensus 618 ~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 697 (732)
+ .. . ...+|+|++||.+|..||+.++. +++.|++. +.+++++++
T Consensus 152 -------------~--~~-~---------~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~----------g~~~~~~~~ 195 (223)
T 3b5e_A 152 -------------P--AT-D---------LAGIRTLIIAGAADETYGPFVPA-LVTLLSRH----------GAEVDARII 195 (223)
T ss_dssp -------------C--CC-C---------CTTCEEEEEEETTCTTTGGGHHH-HHHHHHHT----------TCEEEEEEE
T ss_pred -------------c--cc-c---------ccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHC----------CCceEEEEe
Confidence 0 11 1 25689999999999999999999 99999987 888999999
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 698 RKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 698 ~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
+ +||.+.. +....+.+||.+.+
T Consensus 196 ~-~gH~~~~------~~~~~i~~~l~~~~ 217 (223)
T 3b5e_A 196 P-SGHDIGD------PDAAIVRQWLAGPI 217 (223)
T ss_dssp S-CCSCCCH------HHHHHHHHHHHCC-
T ss_pred c-CCCCcCH------HHHHHHHHHHHhhh
Confidence 9 9999852 22346778887654
No 92
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.74 E-value=9.3e-17 Score=156.94 Aligned_cols=190 Identities=16% Similarity=0.108 Sum_probs=134.6
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHh--cCcEEEEEcccC------CCCCchhHHhc-ccc---cCCccHH----
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRH--LGAVFCIANIRG------GGEYGEEWHKG-GAL---AKKQNCF---- 542 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~rG------~g~~g~~~~~~-~~~---~~~~~~~---- 542 (732)
++.|+||++||..+... .|. .+...|.+ +||.|+++|.+| +|..+..|++. +.. ......+
T Consensus 12 ~~~~~vv~~HG~~~~~~--~~~-~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~ 88 (218)
T 1auo_A 12 PADACVIWLHGLGADRY--DFM-PVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSA 88 (218)
T ss_dssp CCSEEEEEECCTTCCTT--TTH-HHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHH
T ss_pred CCCcEEEEEecCCCChh--hHH-HHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHHHHH
Confidence 67899999999876543 233 34567776 899999999874 22222233321 111 1112233
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHh-hCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHH
Q 004766 543 DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACIN-QRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEE 621 (732)
Q Consensus 543 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~-~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~ 621 (732)
+|+.+.++++.+. .+++++++++|+|+||++++.++. ++|++++++|+.+|..+. . .+..++
T Consensus 89 ~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~---~------~~~~~~------- 151 (218)
T 1auo_A 89 KMVTDLIEAQKRT-GIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT---F------GDELEL------- 151 (218)
T ss_dssp HHHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT---C------CTTCCC-------
T ss_pred HHHHHHHHHHHHc-CCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC---c------hhhhhh-------
Confidence 4444455555542 367889999999999999999999 999999999999997654 0 010100
Q ss_pred HHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCC
Q 004766 622 EFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAG 701 (732)
Q Consensus 622 ~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 701 (732)
. .. .+.+|+|+++|.+|..||+.++.++++.++.. +.++++++++ +|
T Consensus 152 --------~----~~----------~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~----------g~~~~~~~~~-~g 198 (218)
T 1auo_A 152 --------S----AS----------QQRIPALCLHGQYDDVVQNAMGRSAFEHLKSR----------GVTVTWQEYP-MG 198 (218)
T ss_dssp --------C----HH----------HHTCCEEEEEETTCSSSCHHHHHHHHHHHHTT----------TCCEEEEEES-CS
T ss_pred --------h----hc----------ccCCCEEEEEeCCCceecHHHHHHHHHHHHhC----------CCceEEEEec-CC
Confidence 0 01 15679999999999999999999999999976 7789999999 99
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 702 HGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 702 H~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
|.+.. +....+.+||.++|+
T Consensus 199 H~~~~------~~~~~~~~~l~~~l~ 218 (218)
T 1auo_A 199 HEVLP------QEIHDIGAWLAARLG 218 (218)
T ss_dssp SSCCH------HHHHHHHHHHHHHHC
T ss_pred CccCH------HHHHHHHHHHHHHhC
Confidence 98743 234568889988763
No 93
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.74 E-value=5.2e-17 Score=164.49 Aligned_cols=214 Identities=15% Similarity=0.136 Sum_probs=144.1
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
++.|+||++||..+... .|. .+...|.++||.|+++|+||.|......... .-....+|+.++++++.++
T Consensus 38 g~~~~vv~~HG~~~~~~--~~~-~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~----~~~~~~~d~~~~i~~l~~~--- 107 (270)
T 3rm3_A 38 NGPVGVLLVHGFTGTPH--SMR-PLAEAYAKAGYTVCLPRLKGHGTHYEDMERT----TFHDWVASVEEGYGWLKQR--- 107 (270)
T ss_dssp CSSEEEEEECCTTCCGG--GTH-HHHHHHHHTTCEEEECCCTTCSSCHHHHHTC----CHHHHHHHHHHHHHHHHTT---
T ss_pred CCCeEEEEECCCCCChh--HHH-HHHHHHHHCCCEEEEeCCCCCCCCccccccC----CHHHHHHHHHHHHHHHHhh---
Confidence 35599999999876543 243 3455666689999999999998765433221 1223467888889888866
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc----CCCCCccccccCCC-------------CCHH
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK----FTIGHAWVSDFGCS-------------EEEE 621 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~----~~~~~~~~~~~g~p-------------~~~~ 621 (732)
.++++++|+|+||++++.++.++|+ ++++|+..|..++..... ......|...++.. ....
T Consensus 108 -~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (270)
T 3rm3_A 108 -CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTA 185 (270)
T ss_dssp -CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCCSEEEHH
T ss_pred -CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHhhcccccChh
Confidence 5799999999999999999999999 999999998776532211 00001121211111 0011
Q ss_pred HHHHHHh-c-CcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCC
Q 004766 622 EFYWLIK-Y-SPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERK 699 (732)
Q Consensus 622 ~~~~~~~-~-sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 699 (732)
.+..+.. . .....+.+ +.+|+|+++|.+|..||+.++.++++++. +.++++.++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~----------~~~P~lii~G~~D~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 243 (270)
T 3rm3_A 186 SLLQLARLMAQTKAKLDR----------IVCPALIFVSDEDHVVPPGNADIIFQGIS------------STEKEIVRLRN 243 (270)
T ss_dssp HHHHHHHHHHHHHHTGGG----------CCSCEEEEEETTCSSSCTTHHHHHHHHSC------------CSSEEEEEESS
T ss_pred HHHHHHHHHHHHHhhhhh----------cCCCEEEEECCCCcccCHHHHHHHHHhcC------------CCcceEEEeCC
Confidence 1111111 0 11122333 67899999999999999999988887765 44679999999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 700 AGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 700 ~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
+||.+..... ..+....+.+||.++.|
T Consensus 244 ~gH~~~~~~~-~~~~~~~i~~fl~~~~~ 270 (270)
T 3rm3_A 244 SYHVATLDYD-QPMIIERSLEFFAKHAG 270 (270)
T ss_dssp CCSCGGGSTT-HHHHHHHHHHHHHHHC-
T ss_pred CCcccccCcc-HHHHHHHHHHHHHhcCC
Confidence 9999865433 23566778999988754
No 94
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.74 E-value=6e-17 Score=159.58 Aligned_cols=190 Identities=16% Similarity=0.124 Sum_probs=133.9
Q ss_pred CCCCccEEEEEcCCCCccCCCCcChhHHHHHHh--cCcEEEEEcccCC------CCCchhHHhc-ccc---cCCccHHHH
Q 004766 477 LDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH--LGAVFCIANIRGG------GEYGEEWHKG-GAL---AKKQNCFDD 544 (732)
Q Consensus 477 ~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~rG~------g~~g~~~~~~-~~~---~~~~~~~~D 544 (732)
.+++.|+||++||+.+... .|. .+...|++ +||.|+++|.||. |..+..|.+. +.. ......+++
T Consensus 20 ~~~~~~~vv~lHG~~~~~~--~~~-~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~ 96 (226)
T 3cn9_A 20 APNADACIIWLHGLGADRT--DFK-PVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNA 96 (226)
T ss_dssp CTTCCEEEEEECCTTCCGG--GGH-HHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHHHH
T ss_pred CCCCCCEEEEEecCCCChH--HHH-HHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhHHH
Confidence 3567899999999876542 233 34556666 8999999998853 2112222221 111 112233444
Q ss_pred HHH----HHHHHHHcCCCCCCcEEEEecChhHHHHHHHHh-hCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCC
Q 004766 545 FIS----ASEYLISAGYTQSRKLCIEGGSNGGLLVGACIN-QRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEE 619 (732)
Q Consensus 545 ~~~----~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~-~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~ 619 (732)
..+ +++++.+. .+++++++++|+|+||++++.++. ++|++++++|+.+|+.+.....
T Consensus 97 ~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~----------------- 158 (226)
T 3cn9_A 97 SADQVIALIDEQRAK-GIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL----------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC-----------------
T ss_pred HHHHHHHHHHHHHHc-CCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh-----------------
Confidence 444 44444432 367789999999999999999999 9999999999999976542111
Q ss_pred HHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCC
Q 004766 620 EEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERK 699 (732)
Q Consensus 620 ~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 699 (732)
.+.+ . .+.+|+|+++|.+|..||+.++.++++.|... +.++++++++
T Consensus 159 --------~~~~----~----------~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~----------g~~~~~~~~~- 205 (226)
T 3cn9_A 159 --------ALDE----R----------HKRIPVLHLHGSQDDVVDPALGRAAHDALQAQ----------GVEVGWHDYP- 205 (226)
T ss_dssp --------CCCT----G----------GGGCCEEEEEETTCSSSCHHHHHHHHHHHHHT----------TCCEEEEEES-
T ss_pred --------hhcc----c----------ccCCCEEEEecCCCCccCHHHHHHHHHHHHHc----------CCceeEEEec-
Confidence 0011 1 26789999999999999999999999999987 7789999999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 700 AGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 700 ~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
+||.+.. +....+.+||.++|
T Consensus 206 ~gH~~~~------~~~~~i~~~l~~~l 226 (226)
T 3cn9_A 206 MGHEVSL------EEIHDIGAWLRKRL 226 (226)
T ss_dssp CCSSCCH------HHHHHHHHHHHHHC
T ss_pred CCCCcch------hhHHHHHHHHHhhC
Confidence 9998742 23456888998765
No 95
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.73 E-value=2.1e-17 Score=165.68 Aligned_cols=184 Identities=13% Similarity=0.086 Sum_probs=133.9
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEE--cccCCCCCchhHHhcc-cccCC----ccHHHHHHHHHHH
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIA--NIRGGGEYGEEWHKGG-ALAKK----QNCFDDFISASEY 551 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~--~~rG~g~~g~~~~~~~-~~~~~----~~~~~D~~~~~~~ 551 (732)
++.|+||++||+.+... .|. .+...|+ .+|.|+++ +.||.|+++ |.... ..... ....+|+.+++++
T Consensus 60 ~~~p~vv~~HG~~~~~~--~~~-~~~~~l~-~~~~v~~~~~d~~g~g~s~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 133 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDEN--QFF-DFGARLL-PQATILSPVGDVSEHGAAR--FFRRTGEGVYDMVDLERATGKMADFIKA 133 (251)
T ss_dssp TTSCEEEEECCTTCCHH--HHH-HHHHHHS-TTSEEEEECCSEEETTEEE--SSCBCGGGCBCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHh--HHH-HHHHhcC-CCceEEEecCCcCCCCCcc--cccCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 56899999999876532 232 2445666 57999999 788876432 22110 01111 1236788888888
Q ss_pred HHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCc
Q 004766 552 LISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSP 631 (732)
Q Consensus 552 l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp 631 (732)
+.++. +.++++++|+|+||++++.++.++|++++++|+.+|+.+... .+
T Consensus 134 ~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-----------------------------~~ 182 (251)
T 2r8b_A 134 NREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-----------------------------KI 182 (251)
T ss_dssp HHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC-----------------------------CC
T ss_pred HHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc-----------------------------cc
Confidence 87663 778999999999999999999999999999999998764311 00
Q ss_pred ccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHH
Q 004766 632 LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKM 711 (732)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 711 (732)
... .+.+|+|+++|.+|..||+.++.+++++|+++ +.++.+ +++++||++..
T Consensus 183 ---~~~---------~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~----------~~~~~~-~~~~~gH~~~~----- 234 (251)
T 2r8b_A 183 ---SPA---------KPTRRVLITAGERDPICPVQLTKALEESLKAQ----------GGTVET-VWHPGGHEIRS----- 234 (251)
T ss_dssp ---CCC---------CTTCEEEEEEETTCTTSCHHHHHHHHHHHHHH----------SSEEEE-EEESSCSSCCH-----
T ss_pred ---ccc---------ccCCcEEEeccCCCccCCHHHHHHHHHHHHHc----------CCeEEE-EecCCCCccCH-----
Confidence 111 25789999999999999999999999999987 777777 55678998842
Q ss_pred HHHHHHHHHHHHHHhCC
Q 004766 712 IDEAADRYGFMAKMLGA 728 (732)
Q Consensus 712 ~~~~~~~~~fl~~~l~~ 728 (732)
+....+.+||.++|+.
T Consensus 235 -~~~~~~~~~l~~~l~~ 250 (251)
T 2r8b_A 235 -GEIDAVRGFLAAYGGG 250 (251)
T ss_dssp -HHHHHHHHHHGGGC--
T ss_pred -HHHHHHHHHHHHhcCC
Confidence 3345688999988864
No 96
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.73 E-value=3.1e-17 Score=163.56 Aligned_cols=216 Identities=12% Similarity=0.056 Sum_probs=143.7
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCC-chhHHhcccccCCccHHHHHHHHHHHHHHcC
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEY-GEEWHKGGALAKKQNCFDDFISASEYLISAG 556 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~-g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 556 (732)
.+..|+||++||..+... .|. .+...|.++||.|+++|+||.|.. +....... ......+|+.++++++..+
T Consensus 19 ~~~~~~vv~~HG~~~~~~--~~~-~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~---~~~~~~~d~~~~i~~l~~~- 91 (251)
T 3dkr_A 19 EGTDTGVVLLHAYTGSPN--DMN-FMARALQRSGYGVYVPLFSGHGTVEPLDILTKG---NPDIWWAESSAAVAHMTAK- 91 (251)
T ss_dssp CCSSEEEEEECCTTCCGG--GGH-HHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHC---CHHHHHHHHHHHHHHHHTT-
T ss_pred CCCCceEEEeCCCCCCHH--HHH-HHHHHHHHCCCEEEecCCCCCCCCChhhhcCcc---cHHHHHHHHHHHHHHHHHh-
Confidence 356789999999876643 343 345566669999999999998876 33332210 1122367888889998876
Q ss_pred CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCC---CccccccCCCCCHHH--------HHH
Q 004766 557 YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG---HAWVSDFGCSEEEEE--------FYW 625 (732)
Q Consensus 557 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~---~~~~~~~g~p~~~~~--------~~~ 625 (732)
.++++++|+|+||++++.++.++|++++++|+..|+............ ..+....+....... ...
T Consensus 92 ---~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (251)
T 3dkr_A 92 ---YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAA 168 (251)
T ss_dssp ---CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred ---cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHHhhhHHHHHH
Confidence 579999999999999999999999999999999988763211100000 000000111101111 111
Q ss_pred HHhc--CcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCC
Q 004766 626 LIKY--SPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHG 703 (732)
Q Consensus 626 ~~~~--sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 703 (732)
+... .+...+.+ +.+|+|+++|.+|..||+.++.++++++.. ..++.+++++++||.
T Consensus 169 ~~~~~~~~~~~~~~----------~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~gH~ 227 (251)
T 3dkr_A 169 IDQFATTVAADLNL----------VKQPTFIGQAGQDELVDGRLAYQLRDALIN-----------AARVDFHWYDDAKHV 227 (251)
T ss_dssp HHHHHHHHHHTGGG----------CCSCEEEEEETTCSSBCTTHHHHHHHHCTT-----------CSCEEEEEETTCCSC
T ss_pred HHHHHHHHhccccc----------cCCCEEEEecCCCcccChHHHHHHHHHhcC-----------CCCceEEEeCCCCcc
Confidence 1111 01223333 678999999999999999999998888763 046899999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHHH
Q 004766 704 VGLPTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 704 ~~~~~~~~~~~~~~~~~fl~~~ 725 (732)
...... ..+....+.+||.+.
T Consensus 228 ~~~~~~-~~~~~~~i~~fl~~~ 248 (251)
T 3dkr_A 228 ITVNSA-HHALEEDVIAFMQQE 248 (251)
T ss_dssp TTTSTT-HHHHHHHHHHHHHTT
T ss_pred cccccc-hhHHHHHHHHHHHhh
Confidence 865532 245667788898764
No 97
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.73 E-value=1.4e-16 Score=154.22 Aligned_cols=199 Identities=15% Similarity=0.082 Sum_probs=141.2
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChh-HHHHHHhcCcEEEEEcccCCCCCchhHH
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVS-RTILMRHLGAVFCIANIRGGGEYGEEWH 530 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~-~~~~l~~~G~~v~~~~~rG~g~~g~~~~ 530 (732)
+...++ .+| .+|+++++.|.+ +.|+||++||+.+... .|... +...|.++||.|+++|+||.|....
T Consensus 5 ~~~~~~-~~g-~~l~~~~~~~~~-----~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~--- 72 (207)
T 3bdi_A 5 QEEFID-VNG-TRVFQRKMVTDS-----NRRSIALFHGYSFTSM--DWDKADLFNNYSKIGYNVYAPDYPGFGRSAS--- 72 (207)
T ss_dssp EEEEEE-ETT-EEEEEEEECCTT-----CCEEEEEECCTTCCGG--GGGGGTHHHHHHTTTEEEEEECCTTSTTSCC---
T ss_pred eeEEEe-eCC-cEEEEEEEeccC-----CCCeEEEECCCCCCcc--ccchHHHHHHHHhCCCeEEEEcCCcccccCc---
Confidence 333343 489 999999998864 5789999999877643 34331 4556666999999999999775410
Q ss_pred hcccccCCcc-HHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCc
Q 004766 531 KGGALAKKQN-CFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHA 609 (732)
Q Consensus 531 ~~~~~~~~~~-~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~ 609 (732)
.. ...... .++++.+.+..++++ .+.++++++|+|+||.++..++.++|++++++|+..|.... .
T Consensus 73 ~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~-~--------- 138 (207)
T 3bdi_A 73 SE--KYGIDRGDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVE-S--------- 138 (207)
T ss_dssp CT--TTCCTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCG-G---------
T ss_pred cc--CCCCCcchHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCcccc-c---------
Confidence 00 011222 678888888877765 34579999999999999999999999999999998886211 0
Q ss_pred cccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCC
Q 004766 610 WVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT 689 (732)
Q Consensus 610 ~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 689 (732)
+ . ..+.+ +..|+|+++|.+|..|++..+.++.+.+.
T Consensus 139 ----~--------~---------~~~~~----------~~~p~l~i~g~~D~~~~~~~~~~~~~~~~------------- 174 (207)
T 3bdi_A 139 ----L--------K---------GDMKK----------IRQKTLLVWGSKDHVVPIALSKEYASIIS------------- 174 (207)
T ss_dssp ----G--------H---------HHHTT----------CCSCEEEEEETTCTTTTHHHHHHHHHHST-------------
T ss_pred ----h--------h---------HHHhh----------ccCCEEEEEECCCCccchHHHHHHHHhcC-------------
Confidence 0 0 01122 56799999999999999988887776653
Q ss_pred CCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 690 NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 690 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
++.+.+++++||...... ..+....+.+||.
T Consensus 175 -~~~~~~~~~~~H~~~~~~--~~~~~~~i~~fl~ 205 (207)
T 3bdi_A 175 -GSRLEIVEGSGHPVYIEK--PEEFVRITVDFLR 205 (207)
T ss_dssp -TCEEEEETTCCSCHHHHS--HHHHHHHHHHHHH
T ss_pred -CceEEEeCCCCCCccccC--HHHHHHHHHHHHh
Confidence 358889999999864322 1234555667775
No 98
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.73 E-value=2.8e-16 Score=168.48 Aligned_cols=257 Identities=12% Similarity=0.046 Sum_probs=161.8
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceee-eeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKF-SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~-~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
..++|||||++|||+.+.+|. .+|+++|+++|+....+...... ..+.|||||+.|+|++.+
T Consensus 39 ~~~~~SpdG~~l~~~~~~~g~--~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~--------------- 101 (396)
T 3c5m_A 39 YQKCFTQDGKKLLFAGDFDGN--RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE--------------- 101 (396)
T ss_dssp TSCCBCTTSCEEEEEECTTSS--CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT---------------
T ss_pred ecCcCCCCCCEEEEEEecCCC--ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC---------------
Confidence 467899999999999887665 47899999999865433322221 348999999999998632
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEE-------------------eEEecCCcEEEEEEecCCcceEEEEEE
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFS-------------------GHVTEDGQYLVMCIEENCDPVNKVYYC 274 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~-------------------~~~SpDg~~l~~~~~~~~~~~~~l~~~ 274 (732)
.+||++++.++.. ..++..+.. +... +.|||||+++++...........||++
T Consensus 102 ----~~l~~~d~~~~~~--~~~~~~~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~ 173 (396)
T 3c5m_A 102 ----LNLMKVDLETLEE--QVIYTVDEE--WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKV 173 (396)
T ss_dssp ----TEEEEEETTTCCE--EEEEECCTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEE
T ss_pred ----CcEEEEECCCCCc--EEEEecccc--cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEE
Confidence 2699999877643 244443321 2111 345666666554321001125789999
Q ss_pred eCCCCCCCcccccccCCCCCcEEeeeccc-ceEEEEEe-cCCeEEEEeCCCC--CCceEEEEeCCCCCCceEeccCCCCC
Q 004766 275 DLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIAN-DDTVFTFLTNKDA--PKYKIIRVDLKEPNDWFEVIPEAERD 350 (732)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~-dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~ 350 (732)
|++++. ...+..... .....|+| ||++|++.++... ...+|+.++++++. ++.+..+....
T Consensus 174 d~~~g~--------------~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~ 238 (396)
T 3c5m_A 174 DIETGE--------------LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN-VRKIKEHAEGE 238 (396)
T ss_dssp ETTTCC--------------EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC-CEESSCCCTTE
T ss_pred ECCCCc--------------EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc-eeEeeccCCCc
Confidence 998753 233333221 22336899 8888998876221 12689999998765 55665532234
Q ss_pred ceeEEEEecCC-EEEEEEecCCeeE--EEEEeCCCCceeeecccccceeeEeeccc-CCcEEEEEEecCCCC--------
Q 004766 351 VLESATAVNLN-QMIVSYLSDVKYV--LQIRDLKNGSLLHQLPIEIGSVNAISARR-EDSVVFISFTSFLIP-------- 418 (732)
Q Consensus 351 ~l~~~~~~~~~-~l~~~~~~~g~~~--l~~~d~~~g~~~~~l~~~~g~v~~~~~s~-d~~~l~~~~ss~~~p-------- 418 (732)
.+..+.|++++ .|++....++... |+++|+++|+. +.+....+ .. +.+++ |++.+++.. +. .|
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~-~~-~~~s~~dg~~l~~~~-~~-~p~~~~~~~~ 313 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-EEVMVMPP-CS-HLMSNFDGSLMVGDG-CD-APVDVADADS 313 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-EEEEECCS-EE-EEEECSSSSEEEEEE-CC-C---------
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe-EEeeeCCC-CC-CCccCCCCceEEEec-CC-cceeeccccc
Confidence 56778888764 5777766655544 99999987765 44432122 22 66778 888655433 22 33
Q ss_pred ------ceEEEEECCCCCCceEEEEe
Q 004766 419 ------GIVYQCNLKTETPEMKIFRE 438 (732)
Q Consensus 419 ------~~~y~~d~~~~~~~~~~l~~ 438 (732)
..+|.+|+.+++ .+.+..
T Consensus 314 ~~~~~~~~i~~~d~~~~~--~~~l~~ 337 (396)
T 3c5m_A 314 YNIENDPFLYVLNTKAKS--AQKLCK 337 (396)
T ss_dssp -CCCCCCEEEEEETTTTB--CCEEEE
T ss_pred cccCCCCcEEEEecccCc--eEEccC
Confidence 789999998874 444443
No 99
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.72 E-value=2.3e-16 Score=163.13 Aligned_cols=238 Identities=13% Similarity=0.074 Sum_probs=150.7
Q ss_pred ceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchh
Q 004766 449 FHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE 528 (732)
Q Consensus 449 ~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~ 528 (732)
+..+.+.+++ +| ..+.+.++.... .++..|+||++||..+... .|.. +...|.++||.|+++|+||.|....
T Consensus 18 ~~~~~~~~~~-~~-~~~~~~~~~~~~--~~~~~p~vv~~hG~~~~~~--~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~- 89 (315)
T 4f0j_A 18 YPVHYLDFTS-QG-QPLSMAYLDVAP--KKANGRTILLMHGKNFCAG--TWER-TIDVLADAGYRVIAVDQVGFCKSSK- 89 (315)
T ss_dssp SCCEEEEEEE-TT-EEEEEEEEEECC--SSCCSCEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEEECCTTSTTSCC-
T ss_pred ccceeEEEec-CC-CCeeEEEeecCC--CCCCCCeEEEEcCCCCcch--HHHH-HHHHHHHCCCeEEEeecCCCCCCCC-
Confidence 3556677765 56 677766555543 2367799999999876643 3443 4455665899999999999886432
Q ss_pred HHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc---cCC
Q 004766 529 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH---KFT 605 (732)
Q Consensus 529 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~---~~~ 605 (732)
......+++|+.+.+..+++. .+.+++.++|+|+||++++.++.++|++++++|+..|........ ...
T Consensus 90 ------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 161 (315)
T 4f0j_A 90 ------PAHYQYSFQQLAANTHALLER--LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWR 161 (315)
T ss_dssp ------CSSCCCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCC
T ss_pred ------CCccccCHHHHHHHHHHHHHH--hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhh
Confidence 111245678888888877776 345699999999999999999999999999999988853210000 000
Q ss_pred CCCcccc----------------cc-C---CCCCHH-----------------------HHHHHHhcCcccCCCCCCCCC
Q 004766 606 IGHAWVS----------------DF-G---CSEEEE-----------------------EFYWLIKYSPLHNVRRPWEQN 642 (732)
Q Consensus 606 ~~~~~~~----------------~~-g---~p~~~~-----------------------~~~~~~~~sp~~~~~~~~~~~ 642 (732)
....|.. .+ . .+.... .+..+...+....+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----- 236 (315)
T 4f0j_A 162 SVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDR----- 236 (315)
T ss_dssp CHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGG-----
T ss_pred hhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhccc-----
Confidence 0000000 00 0 000000 0111112222233333
Q ss_pred CCCCCCCCeEEEEeeCCCCCCCchHH------------HHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHH
Q 004766 643 PDKPFQYPSTLLLTADHDDRVVPLHS------------LKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQK 710 (732)
Q Consensus 643 ~~~~~~~~p~Li~~g~~D~~v~~~~~------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 710 (732)
+.+|+|+++|.+|..||..+. .+....+.+. ...+.+++++++||.......
T Consensus 237 -----~~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~gH~~~~~~p- 300 (315)
T 4f0j_A 237 -----LQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARR----------IPQATLVEFPDLGHTPQIQAP- 300 (315)
T ss_dssp -----CCSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHH----------STTEEEEEETTCCSCHHHHSH-
T ss_pred -----CCCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhh----------cCCceEEEeCCCCcchhhhCH-
Confidence 789999999999999996554 5666666665 456799999999998643222
Q ss_pred HHHHHHHHHHHHHH
Q 004766 711 MIDEAADRYGFMAK 724 (732)
Q Consensus 711 ~~~~~~~~~~fl~~ 724 (732)
.+....+.+||.+
T Consensus 301 -~~~~~~i~~fl~~ 313 (315)
T 4f0j_A 301 -ERFHQALLEGLQT 313 (315)
T ss_dssp -HHHHHHHHHHHCC
T ss_pred -HHHHHHHHHHhcc
Confidence 2445566677643
No 100
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.72 E-value=2.7e-16 Score=161.67 Aligned_cols=206 Identities=10% Similarity=-0.033 Sum_probs=135.8
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCC---cC-hhHHHHHHhc----CcEEEEEcccC
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPS---FS-VSRTILMRHL----GAVFCIANIRG 521 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~---~~-~~~~~~l~~~----G~~v~~~~~rG 521 (732)
.++.+.+.|.+| .++++++.|+++..++++|+|+++||+.+....+. .. ......|.++ |++|+++|.+|
T Consensus 40 ~~~~~~~~s~~~--~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~ 117 (297)
T 1gkl_A 40 RIVKETYTGING--TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNG 117 (297)
T ss_dssp EEEEEEEEETTE--EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCS
T ss_pred eEEEEEEEcCCC--EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcC
Confidence 567788888765 89999999998765678999999999876543221 01 1223333335 59999999998
Q ss_pred CCCCchhHHhcccccCCccHHHHHHHHHHHHHHcC---------CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEc
Q 004766 522 GGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG---------YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH 592 (732)
Q Consensus 522 ~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---------~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~ 592 (732)
+.+.+..|.. ...+|++..++...... ..|+++++|+|+||||++++.++.++|++|+++++.
T Consensus 118 ~~~~~~~~~~--------~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~ 189 (297)
T 1gkl_A 118 GNCTAQNFYQ--------EFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPL 189 (297)
T ss_dssp TTCCTTTHHH--------HHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CccchHHHHH--------HHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEe
Confidence 6544333321 11234444333221110 037789999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHH
Q 004766 593 VGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLL 672 (732)
Q Consensus 593 ~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~ 672 (732)
+|...+... +. ........+... ..++. ...++++.+|.+|.. +.++.+++
T Consensus 190 sg~~~~~~~-------------~~-~~~~~~~~~~~~---~~~~~----------~~~~l~~~~G~~D~~--~~~~~~l~ 240 (297)
T 1gkl_A 190 SGDYWYGNS-------------PQ-DKANSIAEAINR---SGLSK----------REYFVFAATGSEDIA--YANMNPQI 240 (297)
T ss_dssp SCCCCBSSS-------------HH-HHHHHHHHHHHH---HTCCT----------TSCEEEEEEETTCTT--HHHHHHHH
T ss_pred ccccccCCc-------------cc-hhhhHHHHHHhh---ccCCc----------CcEEEEEEeCCCccc--chhHHHHH
Confidence 997532110 00 000111111111 12222 235777889999976 45889999
Q ss_pred HHHHHhhcCCCCCCCCC----------CCEEEEEeCCCCCCC
Q 004766 673 ATMQYVLCTSLENSPQT----------NPIIGRIERKAGHGV 704 (732)
Q Consensus 673 ~~l~~~~~~~~~~~~~~----------~~~~~~~~~~~gH~~ 704 (732)
++|+++ | .++.+.+++++||.+
T Consensus 241 ~~L~~~----------g~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 241 EAMKAL----------PHFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp HHHHTS----------TTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred HHHHHc----------CCccccccccCCceEEEECCCCCcCH
Confidence 999987 5 589999999999974
No 101
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.72 E-value=1.3e-16 Score=158.70 Aligned_cols=215 Identities=13% Similarity=0.105 Sum_probs=135.4
Q ss_pred ceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHh--cCcEEEEEcccCC----
Q 004766 449 FHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH--LGAVFCIANIRGG---- 522 (732)
Q Consensus 449 ~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~rG~---- 522 (732)
+..+.+.+.+ ..+...++.|+. ...++||++||..+... .|.. +...+.. .++.+++|+.+-.
T Consensus 13 ~~~~~~~~~~----~~l~y~ii~P~~----~~~~~VI~LHG~G~~~~--dl~~-l~~~l~~~~~~~~~i~P~Ap~~~~~~ 81 (246)
T 4f21_A 13 LGTENLYFQS----NAMNYELMEPAK----QARFCVIWLHGLGADGH--DFVD-IVNYFDVSLDEIRFIFPHADIIPVTI 81 (246)
T ss_dssp --------------CCCCEEEECCSS----CCCEEEEEEEC--CCCC--CGGG-GGGGCCSCCTTEEEEEECGGGSCTTT
T ss_pred cccceEEEec----CCcCceEeCCCC----cCCeEEEEEcCCCCCHH--HHHH-HHHHhhhcCCCeEEEeCCCCcccccc
Confidence 3445556654 346677888864 35679999999654432 2221 1122221 3788899886422
Q ss_pred --CCCchhHHhcccccC-------CccHHHHHHHHHHHH----HHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEE
Q 004766 523 --GEYGEEWHKGGALAK-------KQNCFDDFISASEYL----ISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCA 589 (732)
Q Consensus 523 --g~~g~~~~~~~~~~~-------~~~~~~D~~~~~~~l----~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~ 589 (732)
+..|..|+....... ....+...++.++.+ .+. -++++||++.|+|+||.+++.++.++|+.|+++
T Consensus 82 ~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~-gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~ 160 (246)
T 4f21_A 82 NMGMQMRAWYDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQ-GIASENIILAGFSQGGIIATYTAITSQRKLGGI 160 (246)
T ss_dssp HHHHHHHSCTTCCCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC--CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEE
T ss_pred CCCCCcccccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHc-CCChhcEEEEEeCchHHHHHHHHHhCccccccc
Confidence 122455654321111 111223333333333 344 379999999999999999999999999999999
Q ss_pred EEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHH
Q 004766 590 LAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSL 669 (732)
Q Consensus 590 v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~ 669 (732)
|+.+|.+..... +- ...++ . ...+|+|++||.+|++||+..+.
T Consensus 161 i~~sG~lp~~~~------------~~-----------~~~~~---~-----------~~~~Pvl~~HG~~D~vVp~~~~~ 203 (246)
T 4f21_A 161 MALSTYLPAWDN------------FK-----------GKITS---I-----------NKGLPILVCHGTDDQVLPEVLGH 203 (246)
T ss_dssp EEESCCCTTHHH------------HS-----------TTCCG---G-----------GTTCCEEEEEETTCSSSCHHHHH
T ss_pred eehhhccCcccc------------cc-----------ccccc---c-----------ccCCchhhcccCCCCccCHHHHH
Confidence 998885421100 00 00000 0 13579999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 670 KLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 670 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
+.++.|+++ |.++++++|++.||.+.. ++..++.+||.+.|.+
T Consensus 204 ~~~~~L~~~----------g~~v~~~~y~g~gH~i~~------~~l~~~~~fL~k~l~l 246 (246)
T 4f21_A 204 DLSDKLKVS----------GFANEYKHYVGMQHSVCM------EEIKDISNFIAKTFKI 246 (246)
T ss_dssp HHHHHHHTT----------TCCEEEEEESSCCSSCCH------HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHC----------CCCeEEEEECCCCCccCH------HHHHHHHHHHHHHhCC
Confidence 999999988 999999999999998752 3456788999998863
No 102
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.71 E-value=6.5e-16 Score=179.45 Aligned_cols=297 Identities=14% Similarity=0.089 Sum_probs=188.3
Q ss_pred CCCCcEEeCCEEEEEEEcCCCCeeEEEEEeCCCCCc--eEEeCCCCc----CCC-CC-----EEEEeEEECCCCcEEEEE
Q 004766 82 RYDAPFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKA--KVLLDPNTL----SDD-GT-----AALIKVSVSEDAKYLAYA 149 (732)
Q Consensus 82 ~~~~p~~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~--~~l~D~~~l----~~~-~~-----~~~~~~~~SPDG~~la~~ 149 (732)
.+..+.+.|+.++|...+ . | +.+..+++. ++|++.+.+ +.. +. ..+..++|||| ++++|+
T Consensus 27 ~~~~~~w~g~~~~~~~~~-----~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~ 98 (706)
T 2z3z_A 27 YVVGLQWMGDNYVFIEGD-----D-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF 98 (706)
T ss_dssp -CTTCEEETTEEEEEETT-----E-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE
T ss_pred cCCCCcCcCCeEEEEeCC-----c-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE
Confidence 445566667776665422 1 4 555556777 788887543 111 11 34678999999 889988
Q ss_pred EeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCC--
Q 004766 150 LSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT-- 227 (732)
Q Consensus 150 ~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt-- 227 (732)
.+ .+|++||+.+|+.............++|||||+.|+|+.. ..|+++++.+
T Consensus 99 ~~------~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~--------------------~~i~v~~~~~~~ 152 (706)
T 2z3z_A 99 TQ------GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRN--------------------HNLYIARGGKLG 152 (706)
T ss_dssp ET------TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEET--------------------TEEEEEECBCTT
T ss_pred EC------CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEEC--------------------CeEEEEecCccc
Confidence 64 3899999999986543322223478999999999999731 3699999987
Q ss_pred ---CCCCCeEEEecCCCC------------eeEEEeEEecCCcEEEEEEecCC---------------------------
Q 004766 228 ---KQSEDILCWKDPEHP------------KYIFSGHVTEDGQYLVMCIEENC--------------------------- 265 (732)
Q Consensus 228 ---~~~~~~~v~~~~~~~------------~~~~~~~~SpDg~~l~~~~~~~~--------------------------- 265 (732)
+... .+....... .....+.|||||++|++.+.+..
T Consensus 153 ~~~g~~~--~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 153 EGMSRAI--AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp SCCCCCE--ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred ccCCCcE--EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 5432 121111110 01247899999999998873311
Q ss_pred -cceEEEEEEeCCCCCCCcccccccCCCCCcEEeeec--ccc--eEEEEEecCCeEEEEe-CCCCCCceEEEEeCCCCCC
Q 004766 266 -DPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG--FDA--QYEVIANDDTVFTFLT-NKDAPKYKIIRVDLKEPND 339 (732)
Q Consensus 266 -~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~--~~~~~s~dg~~l~~~s-~~~~~~~~l~~~d~~~~~~ 339 (732)
.....|+++|++++. ...+... ... ....|+|||+.|++.+ ++......|+.+|++++..
T Consensus 231 ~~~~~~l~~~d~~~~~--------------~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~ 296 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGK--------------TVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF 296 (706)
T ss_dssp CCCEEEEEEEETTTTE--------------EEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCE
T ss_pred CCCeeEEEEEECCCCc--------------eEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCce
Confidence 124679999998743 1122211 111 1235999999998865 3344567899999998833
Q ss_pred ceEeccCCCCC---ceeEEEEec--CCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeE-eecccCCcEEEEEEe
Q 004766 340 WFEVIPEAERD---VLESATAVN--LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNA-ISARREDSVVFISFT 413 (732)
Q Consensus 340 ~~~l~~~~~~~---~l~~~~~~~--~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~-~~~s~d~~~l~~~~s 413 (732)
.+.+..+.... .+..+.+++ ++.+++....++..+|+.++.+ |+.++.|+.+...+.. +.+++|++.++++.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~-~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~ 375 (706)
T 2z3z_A 297 VRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTT-GRLIRQVTKGEWEVTNFAGFDPKGTRLYFEST 375 (706)
T ss_dssp EEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETT-SCEEEECCCSSSCEEEEEEECTTSSEEEEEES
T ss_pred eeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECC-CCEEEecCCCCeEEEeeeEEcCCCCEEEEEec
Confidence 45554332221 235678888 7888888888888899999875 5555777655555544 688999998877654
Q ss_pred cCCCC--ceEEEEECCCCC
Q 004766 414 SFLIP--GIVYQCNLKTET 430 (732)
Q Consensus 414 s~~~p--~~~y~~d~~~~~ 430 (732)
. ..| ..+|.+|+.+++
T Consensus 376 ~-~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 376 E-ASPLERHFYCIDIKGGK 393 (706)
T ss_dssp S-SCTTCBEEEEEETTCCC
T ss_pred C-CCCceEEEEEEEcCCCC
Confidence 4 333 489999988774
No 103
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.71 E-value=3.4e-16 Score=154.00 Aligned_cols=184 Identities=12% Similarity=0.052 Sum_probs=134.9
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEE--cccCCCCCchhHHhcc-cccCC----ccHHHHHHHHHHH
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIA--NIRGGGEYGEEWHKGG-ALAKK----QNCFDDFISASEY 551 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~--~~rG~g~~g~~~~~~~-~~~~~----~~~~~D~~~~~~~ 551 (732)
++.|+||++||+.+... .|. .+...|+ .||.|+++ |.||.|... |.... ..... ....+++.+.+++
T Consensus 36 ~~~~~vv~~HG~~~~~~--~~~-~~~~~l~-~g~~v~~~~~d~~g~g~s~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 109 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNEL--DLL-PLAEIVD-SEASVLSVRGNVLENGMPR--FFRRLAEGIFDEEDLIFRTKELNEFLDE 109 (226)
T ss_dssp TTSCEEEEECCTTCCTT--TTH-HHHHHHH-TTSCEEEECCSEEETTEEE--SSCEEETTEECHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCChh--HHH-HHHHHhc-cCceEEEecCcccCCcchh--hccccCccCcChhhHHHHHHHHHHHHHH
Confidence 47899999999876542 333 3456778 59999999 788876421 11110 00001 1224456666777
Q ss_pred HHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCc
Q 004766 552 LISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSP 631 (732)
Q Consensus 552 l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp 631 (732)
+.++..+++++++++|+|+||++++.++.++|++++++|+.+|..+...
T Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------------------- 158 (226)
T 2h1i_A 110 AAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG------------------------------- 158 (226)
T ss_dssp HHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-------------------------------
T ss_pred HHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc-------------------------------
Confidence 6776666889999999999999999999999999999999998754310
Q ss_pred ccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHH
Q 004766 632 LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKM 711 (732)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 711 (732)
..... .+.+|+|+++|.+|..|++.++.++++++... +.++.+ +++++||.+.
T Consensus 159 -~~~~~---------~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~----------~~~~~~-~~~~~gH~~~------ 211 (226)
T 2h1i_A 159 -MQLAN---------LAGKSVFIAAGTNDPICSSAESEELKVLLENA----------NANVTM-HWENRGHQLT------ 211 (226)
T ss_dssp -CCCCC---------CTTCEEEEEEESSCSSSCHHHHHHHHHHHHTT----------TCEEEE-EEESSTTSCC------
T ss_pred -ccccc---------ccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhc----------CCeEEE-EeCCCCCCCC------
Confidence 01111 15689999999999999999999999999976 778888 9999999884
Q ss_pred HHHHHHHHHHHHHHh
Q 004766 712 IDEAADRYGFMAKML 726 (732)
Q Consensus 712 ~~~~~~~~~fl~~~l 726 (732)
.+....+.+||.++|
T Consensus 212 ~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 212 MGEVEKAKEWYDKAF 226 (226)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhC
Confidence 234456788888764
No 104
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=2.9e-17 Score=158.91 Aligned_cols=189 Identities=13% Similarity=-0.001 Sum_probs=119.9
Q ss_pred ccEEEEEcCCCCccCCCCcC-hhHHHHHHhc--CcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCC
Q 004766 481 HPCLLYGYGGFNISVTPSFS-VSRTILMRHL--GAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 557 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~-~~~~~~l~~~--G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 557 (732)
.|+|||+||..++.. ++. ..+..++.++ ||.|+++|++|.|+ |..+.++.+++.
T Consensus 2 mptIl~lHGf~ss~~--s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~-------------------~~~~~l~~~~~~-- 58 (202)
T 4fle_A 2 MSTLLYIHGFNSSPS--SAKATTFKSWLQQHHPHIEMQIPQLPPYPA-------------------EAAEMLESIVMD-- 58 (202)
T ss_dssp -CEEEEECCTTCCTT--CHHHHHHHHHHHHHCTTSEEECCCCCSSHH-------------------HHHHHHHHHHHH--
T ss_pred CcEEEEeCCCCCCCC--ccHHHHHHHHHHHcCCCcEEEEeCCCCCHH-------------------HHHHHHHHHHHh--
Confidence 389999999544322 221 1234556555 49999999998651 233334444433
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCC--CCHHHHHHHHhcCcccCC
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCS--EEEEEFYWLIKYSPLHNV 635 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p--~~~~~~~~~~~~sp~~~~ 635 (732)
..+++|+|+|+|+||++++.++.++|+...+++...+..+......... .....+.+ .......... +....+
T Consensus 59 ~~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~ 133 (202)
T 4fle_A 59 KAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGEN---QNPYTGQKYVLESRHIYDLK--AMQIEK 133 (202)
T ss_dssp HTTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEE---ECTTTCCEEEECHHHHHHHH--TTCCSS
T ss_pred cCCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhh---ccccccccccchHHHHHHHH--hhhhhh
Confidence 2457999999999999999999999999888887777655443221100 00011111 1122222122 233333
Q ss_pred CCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHH
Q 004766 636 RRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEA 715 (732)
Q Consensus 636 ~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 715 (732)
.+ +.+|+||+||++|.+||+.++.+++. .+++.+++++||.+.... +..
T Consensus 134 ~~----------~~~P~LiihG~~D~~Vp~~~s~~l~~-----------------~~~l~i~~g~~H~~~~~~----~~~ 182 (202)
T 4fle_A 134 LE----------SPDLLWLLQQTGDEVLDYRQAVAYYT-----------------PCRQTVESGGNHAFVGFD----HYF 182 (202)
T ss_dssp CS----------CGGGEEEEEETTCSSSCHHHHHHHTT-----------------TSEEEEESSCCTTCTTGG----GGH
T ss_pred hc----------cCceEEEEEeCCCCCCCHHHHHHHhh-----------------CCEEEEECCCCcCCCCHH----HHH
Confidence 33 78999999999999999999887642 137888999999886532 234
Q ss_pred HHHHHHHHHHhCC
Q 004766 716 ADRYGFMAKMLGA 728 (732)
Q Consensus 716 ~~~~~fl~~~l~~ 728 (732)
..+.+||.-..|+
T Consensus 183 ~~I~~FL~~a~~l 195 (202)
T 4fle_A 183 SPIVTFLGLATAL 195 (202)
T ss_dssp HHHHHHHTCCCCT
T ss_pred HHHHHHHhhhhhc
Confidence 5678898654444
No 105
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.71 E-value=9.5e-17 Score=170.93 Aligned_cols=148 Identities=15% Similarity=0.110 Sum_probs=102.1
Q ss_pred CceEEEEEEEccCCCeeEEEEEEEcCCCC--CCCCccEEEEEcCCCCccCCCCcC---hhHHHHHHhcCcEEEEEcccCC
Q 004766 448 EFHVHQVFVPSKDGSTKIPMFIVSKKNIK--LDGSHPCLLYGYGGFNISVTPSFS---VSRTILMRHLGAVFCIANIRGG 522 (732)
Q Consensus 448 ~~~~~~~~~~s~dG~~~i~~~~~~p~~~~--~~~~~P~vv~~hG~~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~rG~ 522 (732)
.+..+.+.+++.|| .++.++.+.|.... ..++.|+||++||..+....+... ..+...|+++||.|+++|+||.
T Consensus 24 ~~~~~~~~~~~~dG-~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~ 102 (377)
T 1k8q_A 24 GYPAEEYEVVTEDG-YILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGN 102 (377)
T ss_dssp TCCCEEEEEECTTS-EEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTS
T ss_pred CCCceEEEeEcCCC-CEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCC
Confidence 35567788889999 99999888665321 124789999999987765432211 1233456668999999999998
Q ss_pred CCCchhHH--hcccc--cCCc-cHHH-HHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCC---eeeEEEEcC
Q 004766 523 GEYGEEWH--KGGAL--AKKQ-NCFD-DFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD---LFGCALAHV 593 (732)
Q Consensus 523 g~~g~~~~--~~~~~--~~~~-~~~~-D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~ 593 (732)
|.....-. ..... .... ...+ |+.++++++.+. .+.+++.++|+|+||.+++.++.++|+ +++++|+..
T Consensus 103 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~ 180 (377)
T 1k8q_A 103 TWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKK--TGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALA 180 (377)
T ss_dssp TTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHH--HCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEES
T ss_pred CCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHh--cCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeC
Confidence 86532100 00000 1111 1134 777888887765 334689999999999999999999998 899999988
Q ss_pred Ccccc
Q 004766 594 GVMDM 598 (732)
Q Consensus 594 p~~d~ 598 (732)
|...+
T Consensus 181 ~~~~~ 185 (377)
T 1k8q_A 181 PVATV 185 (377)
T ss_dssp CCSCC
T ss_pred Cchhc
Confidence 86543
No 106
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.71 E-value=6.7e-17 Score=173.19 Aligned_cols=149 Identities=11% Similarity=0.004 Sum_probs=111.4
Q ss_pred CCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC------------CCcC---hhHHHHHHhcC
Q 004766 447 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT------------PSFS---VSRTILMRHLG 511 (732)
Q Consensus 447 ~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~------------~~~~---~~~~~~l~~~G 511 (732)
..+..+.+.+++.+| ..|+++++.|++. .++.|+||++||..+.... ..|. ..+...|+++|
T Consensus 83 ~g~~~e~v~~~~~~g-~~l~~~l~~P~~~--~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G 159 (391)
T 3g8y_A 83 EGYILEKWEFYPFPK-SVSTFLVLKPEHL--KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEG 159 (391)
T ss_dssp TTEEEEEEEECCSTT-CCEEEEEEEETTC--CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTT
T ss_pred CCEEEEEEEEEcCCC-CEEEEEEEeCCCC--CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCC
Confidence 457788899999999 9999999999864 4789999999997654321 0111 13456677799
Q ss_pred cEEEEEcccCCCCCchhHHh----------cc------cccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHH
Q 004766 512 AVFCIANIRGGGEYGEEWHK----------GG------ALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLV 575 (732)
Q Consensus 512 ~~v~~~~~rG~g~~g~~~~~----------~~------~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~ 575 (732)
|+|+++|+||.|+.+..-.. .. ..........|+.+++++|.++..+|++||+|+|+|+||+++
T Consensus 160 ~~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~a 239 (391)
T 3g8y_A 160 YVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPM 239 (391)
T ss_dssp CEEEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHH
T ss_pred CEEEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHH
Confidence 99999999998876532110 00 000011123799999999999999999999999999999999
Q ss_pred HHHHhhCCCeeeEEEEcCCccccc
Q 004766 576 GACINQRPDLFGCALAHVGVMDML 599 (732)
Q Consensus 576 ~~~~~~~p~~f~a~v~~~p~~d~~ 599 (732)
+.++.. +++++++|+..++.++.
T Consensus 240 l~~a~~-~~~i~a~v~~~~~~~~~ 262 (391)
T 3g8y_A 240 MVLGVL-DKDIYAFVYNDFLCQTQ 262 (391)
T ss_dssp HHHHHH-CTTCCEEEEESCBCCHH
T ss_pred HHHHHc-CCceeEEEEccCCCCcc
Confidence 998887 56789998888777663
No 107
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.71 E-value=3.3e-17 Score=184.10 Aligned_cols=140 Identities=15% Similarity=0.088 Sum_probs=109.6
Q ss_pred eEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC-CCcChhHHHHHHhcCcEEEEEcccCCCCCchh
Q 004766 450 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGGEYGEE 528 (732)
Q Consensus 450 ~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~ 528 (732)
..+.+.+++.|| ++|.+.++.|++ .++.|+||+.||....... ..|.......|+++||+|+.+|+||.|+.+..
T Consensus 8 ~~~~v~i~~~DG-~~L~~~~~~P~~---~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~ 83 (587)
T 3i2k_A 8 VASNVMVPMRDG-VRLAVDLYRPDA---DGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGE 83 (587)
T ss_dssp EEEEEEEECTTS-CEEEEEEEEECC---SSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEEEEEEECCCC-CEEEEEEEECCC---CCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCc
Confidence 346688999999 999999999986 3578999998864332110 01221110445559999999999999987655
Q ss_pred HHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc-ccccc
Q 004766 529 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV-MDMLR 600 (732)
Q Consensus 529 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~-~d~~~ 600 (732)
+.. .....+|+.++++||.++.+.+ +||+++|+||||++++.++.++|+.++|+|+.+|. .|+..
T Consensus 84 ~~~------~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~ 149 (587)
T 3i2k_A 84 FVP------HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRA 149 (587)
T ss_dssp CCT------TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCC
T ss_pred ccc------ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccccc
Confidence 432 1357899999999999988776 89999999999999999999999999999999998 77654
No 108
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.71 E-value=7.1e-16 Score=156.83 Aligned_cols=230 Identities=12% Similarity=0.009 Sum_probs=141.4
Q ss_pred EEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCC-CcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccc
Q 004766 456 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP-SFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGA 534 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~ 534 (732)
++..+| .+ +.++.|++ ++.|+|||+|||....... .+......++.+.|+.|+.+|||+.++.
T Consensus 9 ~~~~~~-~~--~~~y~p~~----~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~--------- 72 (274)
T 2qru_A 9 QTLANG-AT--VTIYPTTT----EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT--------- 72 (274)
T ss_dssp EECTTS-CE--EEEECCSS----SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS---------
T ss_pred ccccCC-ee--EEEEcCCC----CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC---------
Confidence 344466 54 45666653 4679999999986433222 2333445667768999999999987652
Q ss_pred ccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHh---hCCCeeeEEEEcCCccccccccc-----CC-
Q 004766 535 LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACIN---QRPDLFGCALAHVGVMDMLRYHK-----FT- 605 (732)
Q Consensus 535 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~---~~p~~f~a~v~~~p~~d~~~~~~-----~~- 605 (732)
.-...++|+.++++||.++.. +++||+|+|+|+||.|++.++. ..|...+++|..+|+.|...... ..
T Consensus 73 --~~p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~ 149 (274)
T 2qru_A 73 --KIDHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQA 149 (274)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSC
T ss_pred --CCcHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhcccc
Confidence 123458999999999998743 2789999999999999999887 35778888998888777211000 00
Q ss_pred CCCcccccc-C-CC-----C-C-HHH---------HHHHHhcCcc-----cCCCCCCCCCCCCCCCCCeEEEEeeCCCCC
Q 004766 606 IGHAWVSDF-G-CS-----E-E-EEE---------FYWLIKYSPL-----HNVRRPWEQNPDKPFQYPSTLLLTADHDDR 662 (732)
Q Consensus 606 ~~~~~~~~~-g-~p-----~-~-~~~---------~~~~~~~sp~-----~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~ 662 (732)
....+...+ . .+ . . ... +..+...... ..+.. .+.... ||+||++|+.|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~l-pP~li~~G~~D~~ 223 (274)
T 2qru_A 150 ISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSD-----ETLKTF-PPCFSTASSSDEE 223 (274)
T ss_dssp CCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCH-----HHHHTS-CCEEEEEETTCSS
T ss_pred ccHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCCh-----hhhcCC-CCEEEEEecCCCC
Confidence 000000000 0 00 0 0 000 0000000000 00100 000014 9999999999999
Q ss_pred CCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCc--hHHHHHHHHHHHHHHHH
Q 004766 663 VVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP--TQKMIDEAADRYGFMAK 724 (732)
Q Consensus 663 v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~~~~~~fl~~ 724 (732)
++..++.++.+++ .+++++++++++|++... .....+....+.+||.+
T Consensus 224 ~~~~~~~~l~~~~--------------~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 224 VPFRYSKKIGRTI--------------PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp SCTHHHHHHHHHS--------------TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHhC--------------CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 9988877776553 346999999999998532 12223556777888864
No 109
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.71 E-value=6.9e-16 Score=159.32 Aligned_cols=236 Identities=14% Similarity=0.078 Sum_probs=143.0
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCC-CCCchhHH
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGG-GEYGEEWH 530 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~-g~~g~~~~ 530 (732)
+...+++.|| .+|.++.+.|++. ..+..|+||++||..+... .|.. ....|+++||.|+++|+||+ |......
T Consensus 8 ~~~~i~~~dG-~~l~~~~~~p~~~-~~~~~~~VvllHG~g~~~~--~~~~-~~~~L~~~G~~Vi~~D~rGh~G~S~~~~- 81 (305)
T 1tht_A 8 IAHVLRVNNG-QELHVWETPPKEN-VPFKNNTILIASGFARRMD--HFAG-LAEYLSTNGFHVFRYDSLHHVGLSSGSI- 81 (305)
T ss_dssp EEEEEEETTT-EEEEEEEECCCTT-SCCCSCEEEEECTTCGGGG--GGHH-HHHHHHTTTCCEEEECCCBCC--------
T ss_pred eEEEEEcCCC-CEEEEEEecCccc-CCCCCCEEEEecCCccCch--HHHH-HHHHHHHCCCEEEEeeCCCCCCCCCCcc-
Confidence 4556778899 9999998877542 1235689999999766532 3443 45667668999999999997 6442211
Q ss_pred hcccccCC-ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc----cC-
Q 004766 531 KGGALAKK-QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH----KF- 604 (732)
Q Consensus 531 ~~~~~~~~-~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~----~~- 604 (732)
.... ..-.+|+.+++++|...+ .+++.++|+||||++++.++.+ | +++++|+..|+.++.... ..
T Consensus 82 ----~~~~~~~~~~D~~~~~~~l~~~~---~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~~~~~ 152 (305)
T 1tht_A 82 ----DEFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKALGFD 152 (305)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHHHSSC
T ss_pred ----cceehHHHHHHHHHHHHHHHhCC---CCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHHhhhh
Confidence 1111 122477888888887543 4689999999999999999888 7 788888877765432110 00
Q ss_pred --CCCCcccc---cc-CCCCCHHHH-HHHHhcC------cccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHH
Q 004766 605 --TIGHAWVS---DF-GCSEEEEEF-YWLIKYS------PLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKL 671 (732)
Q Consensus 605 --~~~~~~~~---~~-g~p~~~~~~-~~~~~~s------p~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~ 671 (732)
........ .+ +.......+ ....... +...+.+ +..|+||+||.+|..||+.++.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------i~~PvLii~G~~D~~vp~~~~~~l 222 (305)
T 1tht_A 153 YLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVAN----------TSVPLIAFTANNDDWVKQEEVYDM 222 (305)
T ss_dssp GGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTT----------CCSCEEEEEETTCTTSCHHHHHHH
T ss_pred hhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhh----------cCCCEEEEEeCCCCccCHHHHHHH
Confidence 00000000 00 100011111 1111110 1112233 788999999999999999988877
Q ss_pred HHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 672 LATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 672 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
++.+. ....++++++++||..........+.+..+..|...
T Consensus 223 ~~~i~------------~~~~~l~~i~~agH~~~e~p~~~~~fl~~~~~~~~~ 263 (305)
T 1tht_A 223 LAHIR------------TGHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAAIA 263 (305)
T ss_dssp HTTCT------------TCCEEEEEETTCCSCTTSSHHHHHHHHHHHHHHHHH
T ss_pred HHhcC------------CCCcEEEEeCCCCCchhhCchHHHHHHHHHHHHHHH
Confidence 66543 234789999999999863332223344444445443
No 110
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.70 E-value=2e-17 Score=177.58 Aligned_cols=148 Identities=7% Similarity=-0.016 Sum_probs=110.9
Q ss_pred CCceEEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccC------------CCCcC---hhHHHHHHhcC
Q 004766 447 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV------------TPSFS---VSRTILMRHLG 511 (732)
Q Consensus 447 ~~~~~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~------------~~~~~---~~~~~~l~~~G 511 (732)
..+..+.+.+++.+| .+++++++.|++. .++.|+||++||+.+... ...|. ..+...|+++|
T Consensus 88 ~g~~~e~v~~~~~~g-~~l~~~l~~P~~~--~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~G 164 (398)
T 3nuz_A 88 EGYRLEKWEFYPLPK-CVSTFLVLIPDNI--NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEG 164 (398)
T ss_dssp SSEEEEEEEECCSTT-BCEEEEEEEESSC--CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTT
T ss_pred CCEEEEEEEEEcCCC-cEEEEEEEeCCCC--CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCC
Confidence 457889999999999 9999999999874 478999999999866432 11222 13556777799
Q ss_pred cEEEEEcccCCCCCchhHHhc----------------ccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHH
Q 004766 512 AVFCIANIRGGGEYGEEWHKG----------------GALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLV 575 (732)
Q Consensus 512 ~~v~~~~~rG~g~~g~~~~~~----------------~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~ 575 (732)
|+|+++|+||.|+.+...... ...........|+.++++||.+++.+|++||+|+|+|+||+++
T Consensus 165 y~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a 244 (398)
T 3nuz_A 165 YIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPM 244 (398)
T ss_dssp CEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHH
T ss_pred CEEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHH
Confidence 999999999988765332100 0001111234799999999999999999999999999999999
Q ss_pred HHHHhhCCCeeeEEEEcCCcccc
Q 004766 576 GACINQRPDLFGCALAHVGVMDM 598 (732)
Q Consensus 576 ~~~~~~~p~~f~a~v~~~p~~d~ 598 (732)
+.++.. ++.++|+|+.+++..+
T Consensus 245 ~~~aa~-~~~i~a~v~~~~~~~~ 266 (398)
T 3nuz_A 245 MVLGTL-DTSIYAFVYNDFLCQT 266 (398)
T ss_dssp HHHHHH-CTTCCEEEEESCBCCH
T ss_pred HHHHhc-CCcEEEEEEecccccc
Confidence 988887 4577888886665543
No 111
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.70 E-value=4.1e-15 Score=159.12 Aligned_cols=308 Identities=11% Similarity=0.019 Sum_probs=183.8
Q ss_pred cEEeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEEC
Q 004766 86 PFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRI 165 (732)
Q Consensus 86 p~~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl 165 (732)
.+++|.+++|.....+. ..||+.+..+++.+.+++..... +..+.|||||++|+|+... .+|+++|+
T Consensus 43 ~SpDg~~l~~~~~~~g~--~~l~~~d~~~g~~~~lt~~~~~~------~~~~~~spdg~~l~~~~~~-----~~l~~~d~ 109 (388)
T 3pe7_A 43 FTRDGSKLLFGGAFDGP--WNYYLLDLNTQVATQLTEGRGDN------TFGGFLSPDDDALFYVKDG-----RNLMRVDL 109 (388)
T ss_dssp BCTTSCEEEEEECTTSS--CEEEEEETTTCEEEECCCSSCBC------SSSCEECTTSSEEEEEETT-----TEEEEEET
T ss_pred CCCCCCEEEEEEcCCCC--ceEEEEeCCCCceEEeeeCCCCC------ccceEEcCCCCEEEEEeCC-----CeEEEEEC
Confidence 34578888888763332 35888887666666666443211 1246799999999999732 37999999
Q ss_pred CCCceeccc-ccceee--eeEEEEeCCcEEEEEEecCCCCCCCCCCCC----cccCCcccEEEEEECCCCCCCCeEEEec
Q 004766 166 EDQIVEADA-LSWFKF--SSIAWTHDSKGFFYSRYPAPKEGKDMDAGT----ETDSNLYHEFYYHFLGTKQSEDILCWKD 238 (732)
Q Consensus 166 ~~g~~~~~~-~~~~~~--~~~~WspDg~~l~y~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~lgt~~~~~~~v~~~ 238 (732)
++|+..... ...... ....++|||+.++.......... ...... .........|+++++.++... .+...
T Consensus 110 ~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~--~l~~~ 186 (388)
T 3pe7_A 110 ATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWV-PLTDWKKFHEFYFTKPCCRLMRVDLKTGEST--VILQE 186 (388)
T ss_dssp TTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCC-CCCSHHHHHHHGGGCCCEEEEEEETTTCCEE--EEEEE
T ss_pred CCCcceeeeechhhcccccceeECCCCCeeccccccCcccc-cccccchhhhhhccCCcceEEEEECCCCceE--EeecC
Confidence 999854321 111111 22344899998887653321000 000000 000123367999999887432 34433
Q ss_pred CCCCeeEEEeEEec-CCcEEEEEEecCC-cceEEEEEEeCCCCCCCcccccccCCCCCcEEeeeccc---ceEEEEEecC
Q 004766 239 PEHPKYIFSGHVTE-DGQYLVMCIEENC-DPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD---AQYEVIANDD 313 (732)
Q Consensus 239 ~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~s~dg 313 (732)
. .....+.||| ||++|++...... ....+||+++++++. .+.+..... .....|+|||
T Consensus 187 ~---~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--------------~~~l~~~~~~~~~~~~~~spdg 249 (388)
T 3pe7_A 187 N---QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--------------MRKVKTHAEGESCTHEFWVPDG 249 (388)
T ss_dssp S---SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--------------CEESCCCCTTEEEEEEEECTTS
T ss_pred C---ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--------------eEEeeeCCCCcccccceECCCC
Confidence 2 2456899999 9999999876421 114579999987642 233333221 1224699999
Q ss_pred CeEEEEeCCCCC-CceEEEEeCCCCCCceEeccCCCCCc----eeEEEEecC-CEEEEEEec------CCeeEEEEEeCC
Q 004766 314 TVFTFLTNKDAP-KYKIIRVDLKEPNDWFEVIPEAERDV----LESATAVNL-NQMIVSYLS------DVKYVLQIRDLK 381 (732)
Q Consensus 314 ~~l~~~s~~~~~-~~~l~~~d~~~~~~~~~l~~~~~~~~----l~~~~~~~~-~~l~~~~~~------~g~~~l~~~d~~ 381 (732)
+.|+|.++..+. ...|+++|+++++ .+.+........ ..+..|+++ +.|++...+ .+...|+++|++
T Consensus 250 ~~l~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 250 SALVYVSYLKGSPDRFIYSADPETLE-NRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp SCEEEEEEETTCCCEEEEEECTTTCC-EEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred CEEEEEecCCCCCcceEEEEecCCCc-eEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 999888876432 3469999999886 344433221000 111245554 456655433 556789999998
Q ss_pred CCceeeecccccc-----------eeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 382 NGSLLHQLPIEIG-----------SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 382 ~g~~~~~l~~~~g-----------~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+|+. +.|+.+.+ .+..+.+++||+.+++.... .....+|.+++..+
T Consensus 329 ~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~-~g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 329 NGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV-HGKPALYLATLPES 385 (388)
T ss_dssp TTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEECCGG
T ss_pred CCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecC-CCceeEEEEECChh
Confidence 7665 66664433 34567789999988876544 45678999998754
No 112
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.70 E-value=5.6e-16 Score=166.67 Aligned_cols=150 Identities=15% Similarity=0.100 Sum_probs=101.0
Q ss_pred ceEEEEEEEccC--C-CeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC---------CCcChhHHHHHHhcCcEEEE
Q 004766 449 FHVHQVFVPSKD--G-STKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT---------PSFSVSRTILMRHLGAVFCI 516 (732)
Q Consensus 449 ~~~~~~~~~s~d--G-~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~---------~~~~~~~~~~l~~~G~~v~~ 516 (732)
....++.|.+.+ | ++.+.++++.|++....++.|+||++||+.+.... ..|.. +...|.++||+|++
T Consensus 44 v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~G~~V~~ 122 (397)
T 3h2g_A 44 VRVAEFTYATIGVEGEPATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDP-LVTRLASQGYVVVG 122 (397)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSH-HHHTTGGGTCEEEE
T ss_pred eEEEEEEEEecCCCCCeEEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHH-HHHHHHHCCCEEEE
Confidence 456677776654 3 24688999999876556789999999998876432 12333 34445559999999
Q ss_pred EcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHc-CCCCCCcEEEEecChhHHHHHHHHh-hCC----C-eeeEE
Q 004766 517 ANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACIN-QRP----D-LFGCA 589 (732)
Q Consensus 517 ~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~-~~p----~-~f~a~ 589 (732)
+|+||.|+.+...+...........+.|.+.++..+.++ ++.++++|+++|+|+||+++++++. ..+ + .+.++
T Consensus 123 ~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~ 202 (397)
T 3h2g_A 123 SDYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVAS 202 (397)
T ss_dssp ECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEE
T ss_pred ecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEE
Confidence 999999875321111000000123456666666666544 6667889999999999999988763 222 2 57888
Q ss_pred EEcCCccccc
Q 004766 590 LAHVGVMDML 599 (732)
Q Consensus 590 v~~~p~~d~~ 599 (732)
++..+..|+.
T Consensus 203 ~~~~~~~~l~ 212 (397)
T 3h2g_A 203 APISGPYALE 212 (397)
T ss_dssp EEESCCSSHH
T ss_pred ecccccccHH
Confidence 8888877764
No 113
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.69 E-value=1.6e-15 Score=176.51 Aligned_cols=281 Identities=10% Similarity=0.034 Sum_probs=174.5
Q ss_pred EEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccC----CceEEEEEEECCCCce---eccccccee
Q 004766 107 LYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSG----SDWATIKLMRIEDQIV---EADALSWFK 179 (732)
Q Consensus 107 l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G----~e~~~i~v~dl~~g~~---~~~~~~~~~ 179 (732)
|++.+..+++.+.+++...... ..+..++|||||++|||+.+.++ +...+|++||+++|+. .+.. . .
T Consensus 38 i~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~-~--~ 111 (719)
T 1z68_A 38 IVLYNIETGQSYTILSNRTMKS---VNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP-R--P 111 (719)
T ss_dssp EEEEESSSCCEEEEECHHHHHT---TTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC-S--S
T ss_pred EEEEEcCCCcEEEEEccccccc---cceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC-c--c
Confidence 7777766677778887643310 01348899999999999986543 2347999999999987 3222 2 2
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCC----------------e
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHP----------------K 243 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~----------------~ 243 (732)
...++|||||+.|+|++. ..|+++++.++... .+....... .
T Consensus 112 ~~~~~~SPDG~~la~~~~--------------------~~i~~~~~~~g~~~--~l~~~~~~~~v~~g~~~~v~~ee~~~ 169 (719)
T 1z68_A 112 IQYLCWSPVGSKLAYVYQ--------------------NNIYLKQRPGDPPF--QITFNGRENKIFNGIPDWVYEEEMLA 169 (719)
T ss_dssp BCCEEECSSTTCEEEEET--------------------TEEEEESSTTSCCE--ECCCCCBTTTEEESSCCHHHHHHTTC
T ss_pred cccceECCCCCEEEEEEC--------------------CeEEEEeCCCCCcE--EEecCCCcCCeEcccccceeeeeccc
Confidence 478999999999999852 26999998776432 121111000 0
Q ss_pred eEEEeEEecCCcEEEEEEecCCc-----------------------------ceEEEEEEeCCCCCCCcccccccCCCCC
Q 004766 244 YIFSGHVTEDGQYLVMCIEENCD-----------------------------PVNKVYYCDLSALPEGLEGFKKRDGLLP 294 (732)
Q Consensus 244 ~~~~~~~SpDg~~l~~~~~~~~~-----------------------------~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 294 (732)
....++|||||++|++.+.+... ....|+++|++++... .
T Consensus 170 ~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~-----------~ 238 (719)
T 1z68_A 170 TKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYV-----------G 238 (719)
T ss_dssp SSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHH-----------C
T ss_pred CcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcc-----------c
Confidence 01368999999999998765321 2347899998874210 0
Q ss_pred cEEeee-----ccc--ceEEEEEecCCeEEEEeCCCCCCceEEEEe----CCCCCCceEecc---CCCCCcee-----EE
Q 004766 295 FVKLID-----GFD--AQYEVIANDDTVFTFLTNKDAPKYKIIRVD----LKEPNDWFEVIP---EAERDVLE-----SA 355 (732)
Q Consensus 295 ~~~l~~-----~~~--~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d----~~~~~~~~~l~~---~~~~~~l~-----~~ 355 (732)
...+.. +.. .....|||||+.++...++.....+|+.+| +++++ ...++. +.....+. .+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ 317 (719)
T 1z68_A 239 PQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD-CPKTQEHIEESRTGWAGGFFVSTP 317 (719)
T ss_dssp CEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE-CCGGGEEEEECSSSCSSSSSCCCC
T ss_pred eeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc-eEEEEecccccCCceEccccCCcc
Confidence 011110 111 112359999654444445555567899999 77665 333442 22123333 67
Q ss_pred EEecCC-EEEE-EEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEec---CCCCceEEEEECCCC
Q 004766 356 TAVNLN-QMIV-SYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTS---FLIPGIVYQCNLKTE 429 (732)
Q Consensus 356 ~~~~~~-~l~~-~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss---~~~p~~~y~~d~~~~ 429 (732)
.|++++ .+++ ....++..+|+++++++++. +.|+.+...+..+..+ +++.++++.+. ...-..+|.+++.++
T Consensus 318 ~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~-~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 318 VFSYDAISYYKIFSDKDGYKHIHYIKDTVENA-IQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp EECTTSSCEEEEEECTTSCEEEEEESSCSTTC-EECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred EECCCCCeEEEEEEccCCceEEEEEECCCCce-EecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 788764 4544 56677888999999986664 6676544445555555 88888776643 123357888887555
No 114
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.69 E-value=3.8e-16 Score=167.09 Aligned_cols=207 Identities=14% Similarity=0.110 Sum_probs=137.0
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCch--------------h
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE--------------E 528 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~--------------~ 528 (732)
..+|..+..|.. .+++.|+||++||+.+... .|. .+...|+++||+|+++|+||+|.... .
T Consensus 82 ~~~p~~~~~P~~--~~~~~P~Vv~~HG~~~~~~--~~~-~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~ 156 (383)
T 3d59_A 82 MTTPANWNSPLR--PGEKYPLVVFSHGLGAFRT--LYS-AIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKS 156 (383)
T ss_dssp CEESSEETCCBC--CSSCEEEEEEECCTTCCTT--TTH-HHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCE
T ss_pred eeeccccCCCcc--cCCCCCEEEEcCCCCCCch--HHH-HHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCce
Confidence 667666554433 2468999999999877643 333 34566666999999999999875321 1
Q ss_pred HHhc----cc------ccCCccHHHHHHHHHHHHHH--------------------cCCCCCCcEEEEecChhHHHHHHH
Q 004766 529 WHKG----GA------LAKKQNCFDDFISASEYLIS--------------------AGYTQSRKLCIEGGSNGGLLVGAC 578 (732)
Q Consensus 529 ~~~~----~~------~~~~~~~~~D~~~~~~~l~~--------------------~~~~d~~~i~i~G~S~GG~l~~~~ 578 (732)
|... +. ...-....+|+.+++++|.+ .+.+|++||+++|+|+||.+++.+
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~ 236 (383)
T 3d59_A 157 WLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQT 236 (383)
T ss_dssp EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHH
Confidence 1000 00 00001125788999999876 456788999999999999999999
Q ss_pred HhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeC
Q 004766 579 INQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD 658 (732)
Q Consensus 579 ~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~ 658 (732)
+.+.| +|+|+|+..|... |...+ .+ .+ +..|+|++||+
T Consensus 237 a~~~~-~v~a~v~~~~~~~-------------------p~~~~---------~~---~~----------i~~P~Lii~g~ 274 (383)
T 3d59_A 237 LSEDQ-RFRCGIALDAWMF-------------------PLGDE---------VY---SR----------IPQPLFFINSE 274 (383)
T ss_dssp HHHCT-TCCEEEEESCCCT-------------------TCCGG---------GG---GS----------CCSCEEEEEET
T ss_pred HhhCC-CccEEEEeCCccC-------------------CCchh---------hh---cc----------CCCCEEEEecc
Confidence 88755 6999998877321 10000 01 12 56799999999
Q ss_pred CCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCC--------------------chHHHHHHH-HH
Q 004766 659 HDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGL--------------------PTQKMIDEA-AD 717 (732)
Q Consensus 659 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--------------------~~~~~~~~~-~~ 717 (732)
+|..+ ...+..++|... +.+.+++++++++|++.. ......+.+ +.
T Consensus 275 ~D~~~---~~~~~~~~l~~~----------~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 341 (383)
T 3d59_A 275 YFQYP---ANIIKMKKCYSP----------DKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKA 341 (383)
T ss_dssp TTCCH---HHHHHHHTTCCT----------TSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHH
T ss_pred cccch---hhHHHHHHHHhc----------CCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHH
Confidence 99743 223333444433 778999999999998621 122223333 46
Q ss_pred HHHHHHHHhCCC
Q 004766 718 RYGFMAKMLGAS 729 (732)
Q Consensus 718 ~~~fl~~~l~~~ 729 (732)
+.+||.++|+..
T Consensus 342 ~~~Fl~~~L~~~ 353 (383)
T 3d59_A 342 SLAFLQKHLGLH 353 (383)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHcCCc
Confidence 899999999754
No 115
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.68 E-value=2.6e-14 Score=145.83 Aligned_cols=255 Identities=13% Similarity=0.056 Sum_probs=165.3
Q ss_pred eEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC-Cceeccccc--ceeee
Q 004766 105 SVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED-QIVEADALS--WFKFS 181 (732)
Q Consensus 105 ~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~-g~~~~~~~~--~~~~~ 181 (732)
..|++.+..+++...++.... .+..++|||||++|++.. . ..|++||+++ ++....... .....
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~-------~v~~~~~spdg~~l~~~~--~----~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPE-------LFEAPNWSPDGKYLLLNS--E----GLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESS-------CCEEEEECTTSSEEEEEE--T----TEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred eeEEEEeCCCCceeeeccCCc-------ceEeeEECCCCCEEEEEc--C----CeEEEEeCCCCCCceEecccccccccc
Confidence 457776655555454444321 245899999999999874 2 2799999999 875432211 12346
Q ss_pred eEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEE
Q 004766 182 SIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCI 261 (732)
Q Consensus 182 ~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 261 (732)
.++|+|||+.|++..... ....+||.+++.++... .+ ... . ....+.|||||++|++..
T Consensus 89 ~~~~spdg~~l~~~~~~~---------------~~~~~l~~~~~~~~~~~--~~-~~~--~-~~~~~~~spdg~~l~~~~ 147 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVE---------------FGKSAIYLLPSTGGTPR--LM-TKN--L-PSYWHGWSPDGKSFTYCG 147 (297)
T ss_dssp CCEECTTSSEEEEEECTT---------------TSSCEEEEEETTCCCCE--EC-CSS--S-SEEEEEECTTSSEEEEEE
T ss_pred ceEECCCCCEEEEEEeCC---------------CCcceEEEEECCCCceE--Ee-ecC--C-CccceEECCCCCEEEEEE
Confidence 799999999999987432 13457899988765421 22 111 1 245789999999999877
Q ss_pred ecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCc
Q 004766 262 EENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW 340 (732)
Q Consensus 262 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~ 340 (732)
.... ...||.+++.++. ...+..... .....|+|+|+.|++.+..++ ..+|+.+++.+.. .
T Consensus 148 ~~~~--~~~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-~~~i~~~~~~~~~-~ 209 (297)
T 2ojh_A 148 IRDQ--VFDIYSMDIDSGV--------------ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTG-QMQIWRVRVDGSS-V 209 (297)
T ss_dssp EETT--EEEEEEEETTTCC--------------EEECCCSSSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTSSC-E
T ss_pred CCCC--ceEEEEEECCCCc--------------ceEcccCCCccccceECCCCCEEEEEecCCC-CccEEEECCCCCC-c
Confidence 5443 5689988887642 223322221 122358999999988776443 5789999877665 4
Q ss_pred eEeccCCCCCceeEEEEecCC-EEEEEEecC--------CeeEEEEEeCCCCceeeecc---cccceeeEeecccCCcEE
Q 004766 341 FEVIPEAERDVLESATAVNLN-QMIVSYLSD--------VKYVLQIRDLKNGSLLHQLP---IEIGSVNAISARREDSVV 408 (732)
Q Consensus 341 ~~l~~~~~~~~l~~~~~~~~~-~l~~~~~~~--------g~~~l~~~d~~~g~~~~~l~---~~~g~v~~~~~s~d~~~l 408 (732)
..+..+. ..+..+.|++++ .|++..... +...|++||+++++. ..+. .+.+.+..+.++++++.+
T Consensus 210 ~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~l 286 (297)
T 2ojh_A 210 ERITDSA--YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV-ETLFDLFGGQGTMNSPNWSPDGDEF 286 (297)
T ss_dssp EECCCCS--EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC-EEEEEEEESTTTSCSCCBCTTSSEE
T ss_pred EEEecCC--cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc-eeeeccCCCCcccccceECCCCCEE
Confidence 5554433 456778888764 455555443 346899999987765 3332 224456677889999988
Q ss_pred EEEEec
Q 004766 409 FISFTS 414 (732)
Q Consensus 409 ~~~~ss 414 (732)
++....
T Consensus 287 ~~~~~~ 292 (297)
T 2ojh_A 287 AYVRYF 292 (297)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 776554
No 116
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.68 E-value=5.4e-16 Score=146.06 Aligned_cols=173 Identities=12% Similarity=0.032 Sum_probs=122.1
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
++.|+||++||..+....+.+ ..+...|.++||.|+.+|+||.|.... ........+++.++++++.+..
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~-------~~~~~~~~~~~~~~~~~~~~~~-- 71 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKV-TALAEVAERLGWTHERPDFTDLDARRD-------LGQLGDVRGRLQRLLEIARAAT-- 71 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHH-HHHHHHHHHTTCEEECCCCHHHHTCGG-------GCTTCCHHHHHHHHHHHHHHHH--
T ss_pred CCCcEEEEEeCCCCCccHHHH-HHHHHHHHHCCCEEEEeCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHhcC--
Confidence 467999999998765322222 134566666899999999999765321 1112223445556677776653
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCC
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRP 638 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~ 638 (732)
+.++++++|+|+||.++..++.++| ++++|+..|..+... + . . ...
T Consensus 72 ~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~---------~-~-----~----------------~~~- 117 (176)
T 2qjw_A 72 EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGP---------L-P-----A----------------LDA- 117 (176)
T ss_dssp TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTT---------B-C-----C----------------CCC-
T ss_pred CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccc---------c-C-----c----------------ccc-
Confidence 4579999999999999999999988 899998888765421 1 0 0 222
Q ss_pred CCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHH
Q 004766 639 WEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADR 718 (732)
Q Consensus 639 ~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 718 (732)
+.+|+|+++|.+|..||+.++.++++.+ . ++++++ ++||.+... ..+....+
T Consensus 118 ---------~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~--------------~~~~~~-~~~H~~~~~---~~~~~~~i 169 (176)
T 2qjw_A 118 ---------AAVPISIVHAWHDELIPAADVIAWAQAR-S--------------ARLLLV-DDGHRLGAH---VQAASRAF 169 (176)
T ss_dssp ---------CSSCEEEEEETTCSSSCHHHHHHHHHHH-T--------------CEEEEE-SSCTTCTTC---HHHHHHHH
T ss_pred ---------cCCCEEEEEcCCCCccCHHHHHHHHHhC-C--------------ceEEEe-CCCcccccc---HHHHHHHH
Confidence 6789999999999999999999888776 2 367778 899998422 23455566
Q ss_pred HHHHH
Q 004766 719 YGFMA 723 (732)
Q Consensus 719 ~~fl~ 723 (732)
.+||.
T Consensus 170 ~~fl~ 174 (176)
T 2qjw_A 170 AELLQ 174 (176)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 67765
No 117
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.68 E-value=4.5e-16 Score=166.74 Aligned_cols=223 Identities=14% Similarity=0.088 Sum_probs=147.6
Q ss_pred eEEEEEEEcc-CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcE----EEEEcccCCCC
Q 004766 450 HVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAV----FCIANIRGGGE 524 (732)
Q Consensus 450 ~~~~~~~~s~-dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~----v~~~~~rG~g~ 524 (732)
.++.+.+.|. .| ..++++++.|++.. .+++|+|+++||+...... .+. .....|.++|++ |+++|++|++.
T Consensus 167 ~v~~~~~~S~~~g-~~~~~~vy~P~~~~-~~~~PvlvllHG~~~~~~~-~~~-~~~~~l~~~g~~~p~iVV~~d~~~~~~ 242 (403)
T 3c8d_A 167 PAKEIIWKSERLK-NSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQSM-PVW-PVLTSLTHRQQLPPAVYVLIDAIDTTH 242 (403)
T ss_dssp CCEEEEEEETTTT-EEEEEEEEEC------CCCCEEEESSHHHHHHTS-CCH-HHHHHHHHTTSSCSCEEEEECCCSHHH
T ss_pred ceEEEEEEccccC-CcEEEEEEeCCCCC-CCCCCEEEEeCCHHHhhcC-cHH-HHHHHHHHcCCCCCeEEEEECCCCCcc
Confidence 4567777775 67 89999999998753 5789999999996432211 122 233444447875 99999986321
Q ss_pred CchhHHhcccccCCccHHHHHH--HHHHHHHHc-C-CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccc
Q 004766 525 YGEEWHKGGALAKKQNCFDDFI--SASEYLISA-G-YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR 600 (732)
Q Consensus 525 ~g~~~~~~~~~~~~~~~~~D~~--~~~~~l~~~-~-~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~ 600 (732)
.... . .....+.|++ +++.++.++ . ..|+++++|+|+||||++++.++.++|++|+++++.+|.+++..
T Consensus 243 r~~~-----~--~~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~ 315 (403)
T 3c8d_A 243 RAHE-----L--PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPH 315 (403)
T ss_dssp HHHH-----S--SSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTC
T ss_pred cccc-----C--CChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCC
Confidence 1111 0 1123455554 466676664 2 35889999999999999999999999999999999999875322
Q ss_pred cccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhc
Q 004766 601 YHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLC 680 (732)
Q Consensus 601 ~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~ 680 (732)
. +++.+....+.+.. . .... ..+|++|.||..|+.+ +.++.+++++|+++
T Consensus 316 ~-------------~~~~~~~~~~~~~~-~---~~~~----------~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~-- 365 (403)
T 3c8d_A 316 R-------------GGQQEGVLLEKLKA-G---EVSA----------EGLRIVLEAGIREPMI-MRANQALYAQLHPI-- 365 (403)
T ss_dssp T-------------TSSSCCHHHHHHHT-T---SSCC----------CSCEEEEEEESSCHHH-HHHHHHHHHHTGGG--
T ss_pred C-------------CCCcHHHHHHHHHh-c---cccC----------CCceEEEEeeCCCchh-HHHHHHHHHHHHhC--
Confidence 1 11111112222222 1 1111 5689999999998754 67899999999988
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 681 TSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
|.+++++++++ ||... .....+...+.||.+.+
T Consensus 366 --------G~~v~~~~~~G-gH~~~----~w~~~l~~~l~~l~~~~ 398 (403)
T 3c8d_A 366 --------KESIFWRQVDG-GHDAL----CWRGGLMQGLIDLWQPL 398 (403)
T ss_dssp --------TTSEEEEEESC-CSCHH----HHHHHHHHHHHHHHGGG
T ss_pred --------CCCEEEEEeCC-CCCHH----HHHHHHHHHHHHHhccc
Confidence 99999999998 69742 22355667778887654
No 118
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.67 E-value=5.9e-16 Score=155.94 Aligned_cols=185 Identities=15% Similarity=0.142 Sum_probs=129.2
Q ss_pred EEEEEcCCCCC-CCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHH
Q 004766 467 MFIVSKKNIKL-DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDF 545 (732)
Q Consensus 467 ~~~~~p~~~~~-~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~ 545 (732)
+.+++|+.... +++.|+||++||+.+.. ..|. .+...|+++||.|+++|+||++ ...|+
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~~--~~~~-~~~~~l~~~G~~v~~~d~~~s~-----------------~~~~~ 93 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAGP--STYA-GLLSHWASHGFVVAAAETSNAG-----------------TGREM 93 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCCG--GGGH-HHHHHHHHHTCEEEEECCSCCT-----------------TSHHH
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCCc--hhHH-HHHHHHHhCCeEEEEecCCCCc-----------------cHHHH
Confidence 77788875321 23789999999987753 2333 3455566689999999999641 11455
Q ss_pred HHHHHHHHHc---------CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCC
Q 004766 546 ISASEYLISA---------GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGC 616 (732)
Q Consensus 546 ~~~~~~l~~~---------~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~ 616 (732)
..+++++.+. ..++.++++++|+|+||++++.++ .+++++++|+..|.....
T Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~----------------- 154 (258)
T 2fx5_A 94 LACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGL----------------- 154 (258)
T ss_dssp HHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSST-----------------
T ss_pred HHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccccc-----------------
Confidence 5566666542 345778999999999999998887 356889998876643210
Q ss_pred CCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchH-HHHHHHHHHHhhcCCCCCCCCCCCEEEE
Q 004766 617 SEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH-SLKLLATMQYVLCTSLENSPQTNPIIGR 695 (732)
Q Consensus 617 p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 695 (732)
+.. ...+.. +.+|+|++||++|..||+.. +.+++++ . +.+++++
T Consensus 155 ~~~------------~~~~~~----------i~~P~lii~G~~D~~~~~~~~~~~~~~~---~----------~~~~~~~ 199 (258)
T 2fx5_A 155 GHD------------SASQRR----------QQGPMFLMSGGGDTIAFPYLNAQPVYRR---A----------NVPVFWG 199 (258)
T ss_dssp TCC------------GGGGGC----------CSSCEEEEEETTCSSSCHHHHTHHHHHH---C----------SSCEEEE
T ss_pred ccc------------hhhhcc----------CCCCEEEEEcCCCcccCchhhHHHHHhc---c----------CCCeEEE
Confidence 000 011222 67899999999999999886 7776655 3 5678999
Q ss_pred EeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 696 IERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 696 ~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
+++++||+......+ .....+.+||.++|.
T Consensus 200 ~~~g~~H~~~~~~~~--~~~~~i~~fl~~~l~ 229 (258)
T 2fx5_A 200 ERRYVSHFEPVGSGG--AYRGPSTAWFRFQLM 229 (258)
T ss_dssp EESSCCTTSSTTTCG--GGHHHHHHHHHHHHH
T ss_pred EECCCCCccccchHH--HHHHHHHHHHHHHhc
Confidence 999999997653322 445668889987763
No 119
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.67 E-value=9.9e-15 Score=169.93 Aligned_cols=284 Identities=12% Similarity=0.087 Sum_probs=174.3
Q ss_pred EEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCc----eEEEEEEECCCCceecccccc---ee
Q 004766 107 LYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSD----WATIKLMRIEDQIVEADALSW---FK 179 (732)
Q Consensus 107 l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e----~~~i~v~dl~~g~~~~~~~~~---~~ 179 (732)
|++-+..+++...+++...... ..+..++|||||++|||..+..+.. ..+|++||+++|+........ ..
T Consensus 39 i~~~d~~~g~~~~~~~~~~~~~---~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~ 115 (723)
T 1xfd_A 39 VRLWNVETNTSTVLIEGKKIES---LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAK 115 (723)
T ss_dssp EEEBCGGGCCCEEEECTTTTTT---TTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCC
T ss_pred EEEEECCCCcEEEEeccccccc---cccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccc
Confidence 5555555566666676543210 1245899999999999997644321 258999999998853222111 11
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCe----------------
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPK---------------- 243 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~---------------- 243 (732)
...++|||||+.|+|++. ..||++++.++... .+........
T Consensus 116 ~~~~~~SPdG~~la~~~~--------------------~~i~~~~~~~g~~~--~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIFE--------------------NNIYYCAHVGKQAI--RVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp CSBCCBCSSTTCEEEEET--------------------TEEEEESSSSSCCE--EEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred ccccEECCCCCEEEEEEC--------------------CeEEEEECCCCceE--EEecCCCCCceECcccceeEEEEecc
Confidence 367999999999999862 36999998776432 3332211111
Q ss_pred eEEEeEEecCCcEEEEEEecCC-----------------------------cceEEEEEEeCCCCCCCcccccccCCCCC
Q 004766 244 YIFSGHVTEDGQYLVMCIEENC-----------------------------DPVNKVYYCDLSALPEGLEGFKKRDGLLP 294 (732)
Q Consensus 244 ~~~~~~~SpDg~~l~~~~~~~~-----------------------------~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 294 (732)
....++|||||++|++.+.+.. .....|+++|++++..
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~------------- 240 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH------------- 240 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC-------------
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce-------------
Confidence 0146899999999999875431 1134799999887431
Q ss_pred cEEeeec-------ccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCce----eEEEEecCC-E
Q 004766 295 FVKLIDG-------FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVL----ESATAVNLN-Q 362 (732)
Q Consensus 295 ~~~l~~~-------~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l----~~~~~~~~~-~ 362 (732)
...+... .......|||||+.+++.+++......|+++|+++++ ...++.......+ ..+.|++++ .
T Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~spdg~~ 319 (723)
T 1xfd_A 241 DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV-CTKKHEDESEAWLHRQNEEPVFSKDGRK 319 (723)
T ss_dssp CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC-EEEEEEEECSSCCCCCCCCCEECTTSCS
T ss_pred eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc-ceEEEEeccCCEEeccCCCceEcCCCCe
Confidence 1222211 1111235999999877776665556789999998886 3444322111222 267888764 4
Q ss_pred EEEE-EecCC----eeEEEEEe-CCCCce--eeecccccceee-EeecccCCcEEEEEEecCC-CCceEEEEECCCC
Q 004766 363 MIVS-YLSDV----KYVLQIRD-LKNGSL--LHQLPIEIGSVN-AISARREDSVVFISFTSFL-IPGIVYQCNLKTE 429 (732)
Q Consensus 363 l~~~-~~~~g----~~~l~~~d-~~~g~~--~~~l~~~~g~v~-~~~~s~d~~~l~~~~ss~~-~p~~~y~~d~~~~ 429 (732)
|++. ...++ ..+|+++| ..+++. .+.++.....+. .+.+++|++.|++..+... .-..+|.+++.++
T Consensus 320 l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~ 396 (723)
T 1xfd_A 320 FFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN 396 (723)
T ss_dssp EEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT
T ss_pred EEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC
Confidence 6665 55666 66899999 554441 356653333333 3578999998877654420 2345777766543
No 120
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.66 E-value=2.4e-15 Score=152.99 Aligned_cols=223 Identities=10% Similarity=0.039 Sum_probs=143.1
Q ss_pred eEEEEEEEccC-CCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHh-cCcEEEEEcccCCCCC--
Q 004766 450 HVHQVFVPSKD-GSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH-LGAVFCIANIRGGGEY-- 525 (732)
Q Consensus 450 ~~~~~~~~s~d-G~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~rG~g~~-- 525 (732)
..+.+.+.|.. | .++.++++.|+++.+.+++|+|++.||+.... .....+...+.+ .+.+|+.++++++..+
T Consensus 12 ~~~~~~~~S~~~~-~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~---~~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~ 87 (278)
T 2gzs_A 12 HFSATSFDSVDGT-RHYRVWTAVPNTTAPASGYPILYMLDGNAVMD---RLDDELLKQLSEKTPPVIVAVGYQTNLPFDL 87 (278)
T ss_dssp EEEEEEEECTTSS-CEEEEEEEEESSCCCTTCEEEEEESSHHHHHH---HCCHHHHHHHTTSCCCEEEEEEESSSSSCCH
T ss_pred ceEEEEEEcCCCC-ceEEEEEECCCCCCCCCCCCEEEEeeChhHHH---HHHHHHHHHhccCCCeEEEEEcCCCCCcCcc
Confidence 56777888876 6 89999999999986667899887777764321 111223333443 5788888888765322
Q ss_pred ---chhHHhcc-------------cccCCccHHHHHHH--HHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeee
Q 004766 526 ---GEEWHKGG-------------ALAKKQNCFDDFIS--ASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFG 587 (732)
Q Consensus 526 ---g~~~~~~~-------------~~~~~~~~~~D~~~--~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~ 587 (732)
+.++.... ....+...+.+++. .+.++.++..+|++|++|+|+||||++++.++.+ |++|+
T Consensus 88 ~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~ 166 (278)
T 2gzs_A 88 NSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFR 166 (278)
T ss_dssp HHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCS
T ss_pred cccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccC
Confidence 11221110 00111233444442 2334444445788999999999999999999999 99999
Q ss_pred EEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCC----
Q 004766 588 CALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRV---- 663 (732)
Q Consensus 588 a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v---- 663 (732)
++++.+|.+.+.. ......+..+.+ .. ...+|++|.||..|.++
T Consensus 167 ~~~~~s~~~~~~~-------------------~~~~~~~~~~~~----~~---------~~~~~i~l~~G~~d~~~~~~~ 214 (278)
T 2gzs_A 167 SYYSASPSLGRGY-------------------DALLSRVTAVEP----LQ---------FCTKHLAIMEGSATQGDNRET 214 (278)
T ss_dssp EEEEESGGGSTTH-------------------HHHHHHHHTSCT----TT---------TTTCEEEEEECCC--------
T ss_pred eEEEeCcchhcCc-------------------chHHHHHHHhhc----cC---------CCCCcEEEEecCccccccccc
Confidence 9999998642210 111122222221 01 13579999999999875
Q ss_pred ----CchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 664 ----VPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 664 ----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
++.++.+++++|+++ |.++.+.++++++|+... .......+.||.+
T Consensus 215 ~~~~~~~~~~~~~~~L~~~----------g~~~~~~~~~g~~H~~~~-----~~~~~~~l~fl~~ 264 (278)
T 2gzs_A 215 HAVGVLSKIHTTLTILKDK----------GVNAVFWDFPNLGHGPMF-----NASFRQALLDISG 264 (278)
T ss_dssp ---CHHHHHHHHHHHHHHT----------TCCEEEEECTTCCHHHHH-----HHHHHHHHHHHTT
T ss_pred hhhhhHHHHHHHHHHHHcC----------CCeeEEEEcCCCCccchh-----HHHHHHHHHHHhh
Confidence 478999999999988 999999999999997432 2223445667754
No 121
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.65 E-value=2e-15 Score=152.98 Aligned_cols=221 Identities=19% Similarity=0.180 Sum_probs=130.4
Q ss_pred EEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccc
Q 004766 456 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 535 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~ 535 (732)
+++.|| ++|.+... +..|.||++||..+... .|... ...|.++||.|+++|+||.|.....+
T Consensus 3 ~~~~~g-~~l~y~~~--------G~g~~vvllHG~~~~~~--~w~~~-~~~l~~~g~~vi~~D~~G~G~S~~~~------ 64 (271)
T 3ia2_A 3 FVAKDG-TQIYFKDW--------GSGKPVLFSHGWLLDAD--MWEYQ-MEYLSSRGYRTIAFDRRGFGRSDQPW------ 64 (271)
T ss_dssp EECTTS-CEEEEEEE--------SSSSEEEEECCTTCCGG--GGHHH-HHHHHTTTCEEEEECCTTSTTSCCCS------
T ss_pred EEcCCC-CEEEEEcc--------CCCCeEEEECCCCCcHH--HHHHH-HHHHHhCCceEEEecCCCCccCCCCC------
Confidence 567799 88876543 23467899999876643 34433 34455589999999999988653221
Q ss_pred cCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhh-CCCeeeEEEEcCCccccccccc-CCCC--C---
Q 004766 536 AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ-RPDLFGCALAHVGVMDMLRYHK-FTIG--H--- 608 (732)
Q Consensus 536 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~-~p~~f~a~v~~~p~~d~~~~~~-~~~~--~--- 608 (732)
...+++++.+.+..+++. .+.+++.++|+||||++++.++.+ .|++++++|+..+......... ...+ .
T Consensus 65 --~~~~~~~~a~d~~~~l~~--l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 140 (271)
T 3ia2_A 65 --TGNDYDTFADDIAQLIEH--LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVF 140 (271)
T ss_dssp --SCCSHHHHHHHHHHHHHH--HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHH
T ss_pred --CCCCHHHHHHHHHHHHHH--hCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHH
Confidence 123445555544444443 234689999999999877666555 5999999988765432211000 0000 0
Q ss_pred ------------cccc----c-c----CCCCCHHH----------------HHHHHhc---CcccCCCCCCCCCCCCCCC
Q 004766 609 ------------AWVS----D-F----GCSEEEEE----------------FYWLIKY---SPLHNVRRPWEQNPDKPFQ 648 (732)
Q Consensus 609 ------------~~~~----~-~----g~p~~~~~----------------~~~~~~~---sp~~~~~~~~~~~~~~~~~ 648 (732)
.+.. . + +....+.. ++.+..+ +....+. .+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~i 210 (271)
T 3ia2_A 141 ARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMA----------KI 210 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHT----------TC
T ss_pred HHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCccccc----------CC
Confidence 0000 0 0 00001100 0011111 1111122 37
Q ss_pred CCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 649 YPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 649 ~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
..|+||++|++|..||+.++.++.+++.. ..++++++++||....... .+..+.+.+||.
T Consensus 211 ~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~-------------~~~~~~~~~~gH~~~~e~p--~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 211 DVPTLVIHGDGDQIVPFETTGKVAAELIK-------------GAELKVYKDAPHGFAVTHA--QQLNEDLLAFLK 270 (271)
T ss_dssp CSCEEEEEETTCSSSCGGGTHHHHHHHST-------------TCEEEEETTCCTTHHHHTH--HHHHHHHHHHHT
T ss_pred CCCEEEEEeCCCCcCChHHHHHHHHHhCC-------------CceEEEEcCCCCcccccCH--HHHHHHHHHHhh
Confidence 89999999999999999986666555432 2588999999998753322 345566777874
No 122
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.65 E-value=3.3e-15 Score=159.79 Aligned_cols=249 Identities=12% Similarity=-0.019 Sum_probs=155.9
Q ss_pred CceEEEEEEEccC--C-CeeEEEEEEEcCCCCCCCCccEEEEEcCCCCcc--CCCCc----------------Ch-hHHH
Q 004766 448 EFHVHQVFVPSKD--G-STKIPMFIVSKKNIKLDGSHPCLLYGYGGFNIS--VTPSF----------------SV-SRTI 505 (732)
Q Consensus 448 ~~~~~~~~~~s~d--G-~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~--~~~~~----------------~~-~~~~ 505 (732)
.....++.|.|.| | ++.+.+.++.|++. .++.|+|.|.||-.+.. ..|++ .. .+..
T Consensus 72 ~~~a~ri~Y~std~~G~p~~~~gtv~~P~~~--~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~ 149 (462)
T 3guu_A 72 NAASFQLQYRTTNTQNEAVADVATVWIPAKP--ASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIG 149 (462)
T ss_dssp TCEEEEEEEEEECTTSCEEEEEEEEEECSSC--CSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHH
T ss_pred CceEEEEEEEEECCCCCEEEEEEEEEecCCC--CCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHH
Confidence 4477888887764 4 23367889999874 24589999999976542 12221 11 1244
Q ss_pred H-HHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC--
Q 004766 506 L-MRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-- 582 (732)
Q Consensus 506 ~-l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-- 582 (732)
+ ++ +||+|+++|++|.|. .|... ... .....|.+.++..+. +.....+++++|+|+||..+++++...
T Consensus 150 ~~l~-~G~~Vv~~Dy~G~G~---~y~~~-~~~--~~~vlD~vrAa~~~~--~~~~~~~v~l~G~S~GG~aal~aa~~~~~ 220 (462)
T 3guu_A 150 WALQ-QGYYVVSSDHEGFKA---AFIAG-YEE--GMAILDGIRALKNYQ--NLPSDSKVALEGYSGGAHATVWATSLAES 220 (462)
T ss_dssp HHHH-TTCEEEEECTTTTTT---CTTCH-HHH--HHHHHHHHHHHHHHT--TCCTTCEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHh-CCCEEEEecCCCCCC---cccCC-cch--hHHHHHHHHHHHHhc--cCCCCCCEEEEeeCccHHHHHHHHHhChh
Confidence 5 55 999999999999774 22211 000 122345555554443 433357999999999999998887753
Q ss_pred --CC-eeeEEEEcCCcccccccccCCCCCcc---------------------ccccCCC---------------------
Q 004766 583 --PD-LFGCALAHVGVMDMLRYHKFTIGHAW---------------------VSDFGCS--------------------- 617 (732)
Q Consensus 583 --p~-~f~a~v~~~p~~d~~~~~~~~~~~~~---------------------~~~~g~p--------------------- 617 (732)
|+ .++++++..+..|+........+..+ ..++-+|
T Consensus 221 yapel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~ 300 (462)
T 3guu_A 221 YAPELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVL 300 (462)
T ss_dssp HCTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHH
T ss_pred hcCccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHH
Confidence 45 58888888887776432110000000 0001011
Q ss_pred -----------------CCHHHHHHHHhcCccc-CCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhh
Q 004766 618 -----------------EEEEEFYWLIKYSPLH-NVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVL 679 (732)
Q Consensus 618 -----------------~~~~~~~~~~~~sp~~-~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~ 679 (732)
.++...+.+.+.+.-. .... ...+...|+||+||.+|.+||+.++.++++++++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~------g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~- 373 (462)
T 3guu_A 301 TYPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASY------TVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAK- 373 (462)
T ss_dssp HCTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSS------CCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHT-
T ss_pred hhccCCHHHHcCCCccccCHHHHHHHHhhccccccccc------CCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHc-
Confidence 1112222222221100 0000 01247889999999999999999999999999988
Q ss_pred cCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 680 CTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
|.++++++|++++|+... .....+.++||.+++..
T Consensus 374 ---------G~~V~~~~y~~~~H~~~~-----~~~~~d~l~WL~~r~~G 408 (462)
T 3guu_A 374 ---------GANINFSPYPIAEHLTAE-----IFGLVPSLWFIKQAFDG 408 (462)
T ss_dssp ---------TCEEEEEEESSCCHHHHH-----HHTHHHHHHHHHHHHHT
T ss_pred ---------CCCeEEEEECcCCccCch-----hhhHHHHHHHHHHHhCC
Confidence 889999999999997642 23466789999998754
No 123
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.65 E-value=7.1e-16 Score=165.89 Aligned_cols=239 Identities=13% Similarity=0.074 Sum_probs=146.7
Q ss_pred EEccCCCeeEEEEEEEcCC---CCCCCCccEEEEEcCCCCccCCCCcChhHHHHHH----hcCc---EEEEEcccCCCCC
Q 004766 456 VPSKDGSTKIPMFIVSKKN---IKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMR----HLGA---VFCIANIRGGGEY 525 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~---~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~----~~G~---~v~~~~~rG~g~~ 525 (732)
+.+.|| .+|.+..+.|.+ ..+.++.|+||++||..+... .|.... ..|. +.|| .|+++|+||.|..
T Consensus 25 ~~~~dg-~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~--~~~~~~-~~L~~~~~~~G~~~~~vi~~D~~G~G~S 100 (398)
T 2y6u_A 25 LCATDR-LELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKV--VWEYYL-PRLVAADAEGNYAIDKVLLIDQVNHGDS 100 (398)
T ss_dssp SSTTCC-CEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGG--GGGGGG-GGSCCCBTTTTEEEEEEEEECCTTSHHH
T ss_pred ccCCCc-eEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHH--HHHHHH-HHHHHhhhhcCcceeEEEEEcCCCCCCC
Confidence 457799 999999998865 122345689999999877643 344333 3344 3589 9999999996643
Q ss_pred chhHHhcccccCCccHHHHHHHHHHHHHHc--C--CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccc
Q 004766 526 GEEWHKGGALAKKQNCFDDFISASEYLISA--G--YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY 601 (732)
Q Consensus 526 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--~--~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~ 601 (732)
.. ..........++.+....+..+++. + -.++.++.++|+|+||.+++.++.++|++++++|+..|.......
T Consensus 101 ~~---~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 177 (398)
T 2y6u_A 101 AV---RNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKA 177 (398)
T ss_dssp HH---HTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCC
T ss_pred CC---CCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEeccccccccc
Confidence 21 1100011123444444443333332 2 134456999999999999999999999999999999887654110
Q ss_pred -------cc---------------CCCCCccc---------c--ccCCCCCHHHHHHHHhcC------------------
Q 004766 602 -------HK---------------FTIGHAWV---------S--DFGCSEEEEEFYWLIKYS------------------ 630 (732)
Q Consensus 602 -------~~---------------~~~~~~~~---------~--~~g~p~~~~~~~~~~~~s------------------ 630 (732)
.. ......|. . .+....+++..+.+....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T 2y6u_A 178 IGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKM 257 (398)
T ss_dssp CSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESS
T ss_pred cccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecC
Confidence 00 00000000 0 011122333333332210
Q ss_pred ------------------cccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCE
Q 004766 631 ------------------PLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPI 692 (732)
Q Consensus 631 ------------------p~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 692 (732)
+...+. .+.+|+|+++|.+|..||+..+.++++.+. .+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~l~----------~i~~PvLii~G~~D~~~~~~~~~~l~~~~~--------------~~ 313 (398)
T 2y6u_A 258 EQAQNLLCYMNMQTFAPFLISNVK----------FVRKRTIHIVGARSNWCPPQNQLFLQKTLQ--------------NY 313 (398)
T ss_dssp CHHHHHHTTSCGGGTHHHHHHHGG----------GCCSEEEEEEETTCCSSCHHHHHHHHHHCS--------------SE
T ss_pred CchhhhhhhcccccchHHHHHhcc----------ccCCCEEEEEcCCCCCCCHHHHHHHHHhCC--------------Cc
Confidence 001112 378999999999999999988877766543 36
Q ss_pred EEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 693 IGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 693 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
.+++++++||...... ..+....+.+||.+++.
T Consensus 314 ~~~~~~~~gH~~~~e~--p~~~~~~i~~fl~~~~~ 346 (398)
T 2y6u_A 314 HLDVIPGGSHLVNVEA--PDLVIERINHHIHEFVL 346 (398)
T ss_dssp EEEEETTCCTTHHHHS--HHHHHHHHHHHHHHHHH
T ss_pred eEEEeCCCCccchhcC--HHHHHHHHHHHHHHHHH
Confidence 8999999999864322 23456678889988763
No 124
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.65 E-value=2.5e-15 Score=157.06 Aligned_cols=203 Identities=8% Similarity=-0.013 Sum_probs=138.3
Q ss_pred eEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcCh------hHHHHHHhcCcEEEEEcccCCCCCchhHHhcc----
Q 004766 464 KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSV------SRTILMRHLGAVFCIANIRGGGEYGEEWHKGG---- 533 (732)
Q Consensus 464 ~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~------~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~---- 533 (732)
.+.+.++.|.+ .+.|.||++||+..... .|.. .+...|.++||.|+++|+||.|..+..-....
T Consensus 49 ~~~~~~~~p~~----~~~~~vvl~HG~g~~~~--~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~ 122 (328)
T 1qlw_A 49 QMYVRYQIPQR----AKRYPITLIHGCCLTGM--TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKL 122 (328)
T ss_dssp CEEEEEEEETT----CCSSCEEEECCTTCCGG--GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHT
T ss_pred eEEEEEEccCC----CCCccEEEEeCCCCCCC--ccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccc
Confidence 45555566654 23477999999875543 3332 24555666999999999999876543211000
Q ss_pred ------------------------cc-cC---------CccHHHH------------------HHHHHHHHHHcCCCCCC
Q 004766 534 ------------------------AL-AK---------KQNCFDD------------------FISASEYLISAGYTQSR 561 (732)
Q Consensus 534 ------------------------~~-~~---------~~~~~~D------------------~~~~~~~l~~~~~~d~~ 561 (732)
.. .+ ....+++ +.+++..++++ . +
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~--~ 198 (328)
T 1qlw_A 123 GKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIK--L--D 198 (328)
T ss_dssp TSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHH--H--T
T ss_pred cccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHH--h--C
Confidence 00 00 0001333 55555666554 1 3
Q ss_pred cEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCC
Q 004766 562 KLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQ 641 (732)
Q Consensus 562 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~ 641 (732)
++.++|+|+||.+++.++.++|++++++|+..|... . ++ ....+
T Consensus 199 ~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------~-------------~~-~~~~~---- 242 (328)
T 1qlw_A 199 GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------P-------------KP-EDVKP---- 242 (328)
T ss_dssp SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC------------------C-------------CG-GGCGG----
T ss_pred CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC------------------C-------------CH-HHHhh----
Confidence 899999999999999999999999999999887430 0 00 11111
Q ss_pred CCCCCCCCCeEEEEeeCCCCCCCc-----hHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCC-----CCCCCchHHH
Q 004766 642 NPDKPFQYPSTLLLTADHDDRVVP-----LHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAG-----HGVGLPTQKM 711 (732)
Q Consensus 642 ~~~~~~~~~p~Li~~g~~D~~v~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g-----H~~~~~~~~~ 711 (732)
....|+||+||++|..||+ .++.+++++++.+ |.++++++++++| |......+.
T Consensus 243 -----~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~----------g~~~~~~~~~~~gi~G~~H~~~~~~~~- 306 (328)
T 1qlw_A 243 -----LTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAA----------GGKGQLMSLPALGVHGNSHMMMQDRNN- 306 (328)
T ss_dssp -----GTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHT----------TCCEEEEEGGGGTCCCCCTTGGGSTTH-
T ss_pred -----ccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHh----------CCCceEEEcCCCCcCCCcccchhccCH-
Confidence 1457999999999999997 8899999999987 7889999999666 987655422
Q ss_pred HHHHHHHHHHHHHHhCC
Q 004766 712 IDEAADRYGFMAKMLGA 728 (732)
Q Consensus 712 ~~~~~~~~~fl~~~l~~ 728 (732)
.+....+.+||.+++..
T Consensus 307 ~~~~~~i~~fl~~~~~~ 323 (328)
T 1qlw_A 307 LQVADLILDWIGRNTAK 323 (328)
T ss_dssp HHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHhcccC
Confidence 45677888999987653
No 125
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.65 E-value=1.7e-14 Score=157.75 Aligned_cols=235 Identities=14% Similarity=0.044 Sum_probs=139.6
Q ss_pred EEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhc
Q 004766 453 QVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKG 532 (732)
Q Consensus 453 ~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~ 532 (732)
.+.+.+.|| .+|.+... +..|+||++||+.+... .|.. +...|.++||.|+++|+||.|.....
T Consensus 5 ~~~~~~~dG-~~l~y~~~--------G~gp~VV~lHG~~~~~~--~~~~-l~~~La~~Gy~Vi~~D~rG~G~S~~~---- 68 (456)
T 3vdx_A 5 TVGQENSTS-IDLYYEDH--------GTGVPVVLIHGFPLSGH--SWER-QSAALLDAGYRVITYDRRGFGQSSQP---- 68 (456)
T ss_dssp EEEEETTEE-EEEEEEEE--------SSSEEEEEECCTTCCGG--GGTT-HHHHHHHHTEEEEEECCTTSTTSCCC----
T ss_pred eecccccCC-eEEEEEEe--------CCCCEEEEECCCCCcHH--HHHH-HHHHHHHCCcEEEEECCCCCCCCCCC----
Confidence 345567788 77775432 35689999999877643 3444 34555449999999999998865321
Q ss_pred ccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC-CCeeeEEEEcCCcccccccccCCC-CC--
Q 004766 533 GALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVGVMDMLRYHKFTI-GH-- 608 (732)
Q Consensus 533 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~~f~a~v~~~p~~d~~~~~~~~~-~~-- 608 (732)
....+++++.+.+..+++. .+.+++.++|+|+||++++.++.++ |++++++|+..|............ +.
T Consensus 69 ----~~~~s~~~~a~dl~~~l~~--l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~ 142 (456)
T 3vdx_A 69 ----TTGYDYDTFAADLNTVLET--LDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAP 142 (456)
T ss_dssp ----SSCCSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBC
T ss_pred ----CCCCCHHHHHHHHHHHHHH--hCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccch
Confidence 1223455555544444443 2456899999999999888888876 999999999988764322111000 00
Q ss_pred ----------------ccc----cc-cC------CCCCHHHHHHHHh----cCcc-------cCCCCCCCCCCCCCCCCC
Q 004766 609 ----------------AWV----SD-FG------CSEEEEEFYWLIK----YSPL-------HNVRRPWEQNPDKPFQYP 650 (732)
Q Consensus 609 ----------------~~~----~~-~g------~p~~~~~~~~~~~----~sp~-------~~~~~~~~~~~~~~~~~~ 650 (732)
.+. .. +. ....++....+.. ..+. ..... .......+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~l~~i~~ 219 (456)
T 3vdx_A 143 QEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTD---FRADIPRIDV 219 (456)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCC---CTTTSTTCCS
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhh---HHHHhhhCCC
Confidence 000 00 00 0111111111110 0000 00000 0011123789
Q ss_pred eEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 651 STLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 651 p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
|+|+++|.+|..||+.+..+..+++ ...+.+++++++||....... ......+.+||.+++.
T Consensus 220 PvLiI~G~~D~~vp~~~~~~~l~~~-------------~~~~~~~~i~gagH~~~~e~p--~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 220 PALILHGTGDRTLPIENTARVFHKA-------------LPSAEYVEVEGAPHGLLWTHA--EEVNTALLAFLAKALE 281 (456)
T ss_dssp CCEEEEETTCSSSCGGGTHHHHHHH-------------CTTSEEEEETTCCSCTTTTTH--HHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCcCHHHHHHHHHHH-------------CCCceEEEeCCCCCcchhhCH--HHHHHHHHHHHHHhhc
Confidence 9999999999999998444433332 223588999999999765333 3566678889988763
No 126
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.64 E-value=2.8e-15 Score=159.09 Aligned_cols=236 Identities=14% Similarity=0.102 Sum_probs=144.3
Q ss_pred CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCC-----------CcChhHH---HHHHhcCcEEEEEcccC--CC
Q 004766 460 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP-----------SFSVSRT---ILMRHLGAVFCIANIRG--GG 523 (732)
Q Consensus 460 dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~-----------~~~~~~~---~~l~~~G~~v~~~~~rG--~g 523 (732)
+| .++.+...-+.+ ....|+||++||..+..... .|..... .++. +||.|+++|+|| .|
T Consensus 29 ~g-~~l~y~~~g~~~---~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~vi~~D~~G~~~G 103 (366)
T 2pl5_A 29 SP-VVIAYETYGTLS---SSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDT-NQYFIICSNVIGGCKG 103 (366)
T ss_dssp SS-EEEEEEEEECCC---TTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEET-TTCEEEEECCTTCSSS
T ss_pred cC-ceeeEEeccCcC---CCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccc-cccEEEEecCCCcccC
Confidence 44 556555444332 12368999999988775421 3433221 2234 899999999999 56
Q ss_pred CCchhHHhcc-----cccCCccHHHHHHHHHHHHHHcCCCCCCcE-EEEecChhHHHHHHHHhhCCCeeeEEEEcCCccc
Q 004766 524 EYGEEWHKGG-----ALAKKQNCFDDFISASEYLISAGYTQSRKL-CIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 597 (732)
Q Consensus 524 ~~g~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i-~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d 597 (732)
..+..-.... .......+++++.+.+..+++. ...+++ .++|+|+||++++.++.++|++++++|+..|...
T Consensus 104 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 181 (366)
T 2pl5_A 104 SSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVES--LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAE 181 (366)
T ss_dssp SSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSB
T ss_pred CCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHH--cCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCcc
Confidence 5432100000 0000124678888777777765 345688 8999999999999999999999999999888654
Q ss_pred ccccc------------c--------C--------------------CCCCccccccC----------------------
Q 004766 598 MLRYH------------K--------F--------------------TIGHAWVSDFG---------------------- 615 (732)
Q Consensus 598 ~~~~~------------~--------~--------------------~~~~~~~~~~g---------------------- 615 (732)
..... . + .....+...+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (366)
T 2pl5_A 182 HSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQ 261 (366)
T ss_dssp CCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGST
T ss_pred CCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHH
Confidence 31100 0 0 00000000000
Q ss_pred -----CCCCHHHH----HHHHhcCccc------CCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhc
Q 004766 616 -----CSEEEEEF----YWLIKYSPLH------NVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLC 680 (732)
Q Consensus 616 -----~p~~~~~~----~~~~~~sp~~------~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~ 680 (732)
....+..+ ..+..+.... .+. .+..|+||++|.+|..||+..+.++++.+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~-- 329 (366)
T 2pl5_A 262 GESFVDRFDANSYIYVTKALDHYSLGKGKELTAALS----------NATCRFLVVSYSSDWLYPPAQSREIVKSLEAA-- 329 (366)
T ss_dssp TCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHT----------TCCSEEEEEEETTCCSSCHHHHHHHHHHHHHT--
T ss_pred HHhhhcccChhHHHHHHhhhhhhccccccchhhhhc----------cCCCCEEEEecCCCcccCHHHHHHHHHHhhhc--
Confidence 00112211 1222222111 222 27889999999999999999999999999865
Q ss_pred CCCCCCCCCCCEEEEEe-CCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 681 TSLENSPQTNPIIGRIE-RKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 681 ~~~~~~~~~~~~~~~~~-~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
+..+.++++ +++||....... .+....+.+||.+
T Consensus 330 --------~~~~~~~~~~~~~gH~~~~e~p--~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 330 --------DKRVFYVELQSGEGHDSFLLKN--PKQIEILKGFLEN 364 (366)
T ss_dssp --------TCCEEEEEECCCBSSGGGGSCC--HHHHHHHHHHHHC
T ss_pred --------ccCeEEEEeCCCCCcchhhcCh--hHHHHHHHHHHcc
Confidence 556789999 899998754332 2455567788864
No 127
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.64 E-value=1.7e-15 Score=157.13 Aligned_cols=215 Identities=14% Similarity=0.033 Sum_probs=136.5
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| ..+.+... ++.|+||++||+.+... .|. .+...|+ .||.|+++|+||.|... ....
T Consensus 55 ~~~-~~~~~~~~--------g~~p~vv~lhG~~~~~~--~~~-~~~~~L~-~~~~v~~~D~~G~G~S~--------~~~~ 113 (314)
T 3kxp_A 55 IGR-ITLNVREK--------GSGPLMLFFHGITSNSA--VFE-PLMIRLS-DRFTTIAVDQRGHGLSD--------KPET 113 (314)
T ss_dssp CSS-CEEEEEEE--------CCSSEEEEECCTTCCGG--GGH-HHHHTTT-TTSEEEEECCTTSTTSC--------CCSS
T ss_pred ECC-EEEEEEec--------CCCCEEEEECCCCCCHH--HHH-HHHHHHH-cCCeEEEEeCCCcCCCC--------CCCC
Confidence 367 77766543 23689999999876542 333 3456677 58999999999988653 1223
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc------CCCCCc-c-
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK------FTIGHA-W- 610 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------~~~~~~-~- 610 (732)
...++|+.+.+..+++. .+.+++.++|+|+||++++.++.++|++++++|+..|......... ...... +
T Consensus 114 ~~~~~~~~~dl~~~l~~--l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (314)
T 3kxp_A 114 GYEANDYADDIAGLIRT--LARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFE 191 (314)
T ss_dssp CCSHHHHHHHHHHHHHH--HTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBS
T ss_pred CCCHHHHHHHHHHHHHH--hCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhc
Confidence 34567777776666654 2346999999999999999999999999999999877653321100 000000 0
Q ss_pred ---------ccccCCCCCHHHHHHHHhc---------------------------CcccCCCCCCCCCCCCCCCCCeEEE
Q 004766 611 ---------VSDFGCSEEEEEFYWLIKY---------------------------SPLHNVRRPWEQNPDKPFQYPSTLL 654 (732)
Q Consensus 611 ---------~~~~g~p~~~~~~~~~~~~---------------------------sp~~~~~~~~~~~~~~~~~~~p~Li 654 (732)
...+.. ...+....+... +....+.+ +..|+|+
T Consensus 192 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------i~~P~Li 260 (314)
T 3kxp_A 192 DIKAVEAYLAGRYPN-IPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRD----------VTKPVLI 260 (314)
T ss_dssp SHHHHHHHHHHHSTT-SCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHH----------CCSCEEE
T ss_pred CHHHHHHHHHhhccc-CchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhc----------CCCCEEE
Confidence 000000 111111111100 11111222 6889999
Q ss_pred EeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 655 LTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 655 ~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
++|++|..+|+..+.++.+.+.. +++++++++||...... .....+.+.+||.
T Consensus 261 i~G~~D~~~~~~~~~~~~~~~~~--------------~~~~~~~g~gH~~~~e~--~~~~~~~i~~fl~ 313 (314)
T 3kxp_A 261 VRGESSKLVSAAALAKTSRLRPD--------------LPVVVVPGADHYVNEVS--PEITLKAITNFID 313 (314)
T ss_dssp EEETTCSSSCHHHHHHHHHHCTT--------------SCEEEETTCCSCHHHHC--HHHHHHHHHHHHH
T ss_pred EecCCCccCCHHHHHHHHHhCCC--------------ceEEEcCCCCCcchhhC--HHHHHHHHHHHHh
Confidence 99999999999988888776542 47788999999864322 2345566777775
No 128
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.63 E-value=9.4e-15 Score=156.55 Aligned_cols=300 Identities=12% Similarity=0.050 Sum_probs=178.6
Q ss_pred EEeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECC
Q 004766 87 FKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIE 166 (732)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~ 166 (732)
+++|.+++|.....+. ..||+.+..+++...+.....-. ...+.|||||++|+|+.... +|+++|+.
T Consensus 44 SpdG~~l~~~~~~~g~--~~l~~~d~~~~~~~~l~~~~~~~------~~~~~~spdg~~l~~~~~~~-----~l~~~d~~ 110 (396)
T 3c5m_A 44 TQDGKKLLFAGDFDGN--RNYYLLNLETQQAVQLTEGKGDN------TFGGFISTDERAFFYVKNEL-----NLMKVDLE 110 (396)
T ss_dssp CTTSCEEEEEECTTSS--CEEEEEETTTTEEEECCCSSCBC------TTTCEECTTSSEEEEEETTT-----EEEEEETT
T ss_pred CCCCCEEEEEEecCCC--ceEEEEECCCCcEEEeecCCCCc------cccceECCCCCEEEEEEcCC-----cEEEEECC
Confidence 3477788888765333 34788776555545544332110 11378999999999997432 79999999
Q ss_pred CCceecccccceeeeeEEEEeCCcEEEEEEecCCCC----CCCCC-CCCcc------cCCcccEEEEEECCCCCCCCeEE
Q 004766 167 DQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKE----GKDMD-AGTET------DSNLYHEFYYHFLGTKQSEDILC 235 (732)
Q Consensus 167 ~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~----~~~~~-~~~~~------~~~~~~~v~~~~lgt~~~~~~~v 235 (732)
+|+....... ...|+|||+.|+|........ ...+. ++... .......|+++++.++... .+
T Consensus 111 ~~~~~~~~~~-----~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~--~~ 183 (396)
T 3c5m_A 111 TLEEQVIYTV-----DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELE--VI 183 (396)
T ss_dssp TCCEEEEEEC-----CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEE--EE
T ss_pred CCCcEEEEec-----ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEE--ee
Confidence 9875432211 112888888887743210000 00000 00000 0023457999999876432 33
Q ss_pred EecCCCCeeEEEeEEec-CCcEEEEEEecCCc-ceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc---cceEEEEE
Q 004766 236 WKDPEHPKYIFSGHVTE-DGQYLVMCIEENCD-PVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF---DAQYEVIA 310 (732)
Q Consensus 236 ~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~-~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~s 310 (732)
... ......+.||| ||++|++....... ...+||+++++++. .+.+.... ......|+
T Consensus 184 ~~~---~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--------------~~~l~~~~~~~~~~~~~~s 246 (396)
T 3c5m_A 184 HQD---TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN--------------VRKIKEHAEGESCTHEFWI 246 (396)
T ss_dssp EEE---SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--------------CEESSCCCTTEEEEEEEEC
T ss_pred ccC---CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--------------eeEeeccCCCccccceEEC
Confidence 332 22456789999 89999888742211 12579999987642 22333211 11223699
Q ss_pred ecCCeEEEEeCCCC-CCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCEEEEEEe--------------cCCeeE
Q 004766 311 NDDTVFTFLTNKDA-PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQMIVSYL--------------SDVKYV 374 (732)
Q Consensus 311 ~dg~~l~~~s~~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~l~~~~~--------------~~g~~~ 374 (732)
|||+.|++.++..+ ....|+++|++++. .+.+.... . .. +.+++ ++.+++... .++...
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~~-~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~ 321 (396)
T 3c5m_A 247 PDGSAMAYVSYFKGQTDRVIYKANPETLE-NEEVMVMP-P--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPF 321 (396)
T ss_dssp TTSSCEEEEEEETTTCCEEEEEECTTTCC-EEEEEECC-S--EE-EEEECSSSSEEEEEECCC----------CCCCCCE
T ss_pred CCCCEEEEEecCCCCccceEEEEECCCCC-eEEeeeCC-C--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCc
Confidence 99999998876533 23459999998876 34443322 1 22 67776 666555432 124478
Q ss_pred EEEEeCCCCceeeecccccc-----------eeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 375 LQIRDLKNGSLLHQLPIEIG-----------SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 375 l~~~d~~~g~~~~~l~~~~g-----------~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
|+++|+++|+. +.|+.... ....+.+++|++.+++.... ..+..+|.+++.++.
T Consensus 322 i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~-~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 322 LYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF-EGVPAIYIADVPESY 386 (396)
T ss_dssp EEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEECCTTC
T ss_pred EEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecC-CCCceEEEEEEcccc
Confidence 99999987764 55553322 13345678999988776544 456789999998774
No 129
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.63 E-value=3.8e-15 Score=149.58 Aligned_cols=212 Identities=15% Similarity=0.064 Sum_probs=136.2
Q ss_pred EEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccc
Q 004766 455 FVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGA 534 (732)
Q Consensus 455 ~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~ 534 (732)
.+.+.|| .++.+... ++.|+||++||+.+... .|. .+...|+ +||.|+++|+||.|.....
T Consensus 6 ~~~~~~g-~~l~~~~~--------g~~~~vv~lHG~~~~~~--~~~-~~~~~l~-~~~~vi~~d~~G~G~S~~~------ 66 (262)
T 3r0v_A 6 TVPSSDG-TPIAFERS--------GSGPPVVLVGGALSTRA--GGA-PLAERLA-PHFTVICYDRRGRGDSGDT------ 66 (262)
T ss_dssp EEECTTS-CEEEEEEE--------ECSSEEEEECCTTCCGG--GGH-HHHHHHT-TTSEEEEECCTTSTTCCCC------
T ss_pred eEEcCCC-cEEEEEEc--------CCCCcEEEECCCCcChH--HHH-HHHHHHh-cCcEEEEEecCCCcCCCCC------
Confidence 3566789 88876654 23578999999877643 233 4456777 8999999999998865321
Q ss_pred ccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCC-------
Q 004766 535 LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG------- 607 (732)
Q Consensus 535 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~------- 607 (732)
...+++|+.+.+..+++. .+ +++.++|+|+||.+++.++.++| +++++|+..|.............
T Consensus 67 ---~~~~~~~~~~~~~~~~~~--l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 139 (262)
T 3r0v_A 67 ---PPYAVEREIEDLAAIIDA--AG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLD 139 (262)
T ss_dssp ---SSCCHHHHHHHHHHHHHH--TT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHh--cC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHH
Confidence 134566666666666654 23 68999999999999999999999 99999998886543211100000
Q ss_pred ------------Cccccc-cCCCCCHHHHHHHHhc------------------------CcccCCCCCCCCCCCCCCCCC
Q 004766 608 ------------HAWVSD-FGCSEEEEEFYWLIKY------------------------SPLHNVRRPWEQNPDKPFQYP 650 (732)
Q Consensus 608 ------------~~~~~~-~g~p~~~~~~~~~~~~------------------------sp~~~~~~~~~~~~~~~~~~~ 650 (732)
..+... .+.+ ++..+.+... .+...+. .+.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~i~~ 207 (262)
T 3r0v_A 140 ALLAEGRRGDAVTYFMTEGVGVP--PDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFA----------SISI 207 (262)
T ss_dssp HHHHTTCHHHHHHHHHHHTSCCC--HHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHT----------TCCS
T ss_pred HHhhccchhhHHHHHhhcccCCC--HHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcC----------cCCC
Confidence 000001 1111 1111111110 0111222 2788
Q ss_pred eEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 651 STLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 651 p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
|+|+++|.+|..||+..+.++.+.+. ..++++++++||. ..+ .+..+.+.+||.
T Consensus 208 P~lii~G~~D~~~~~~~~~~~~~~~~--------------~~~~~~~~~~gH~-~~p----~~~~~~i~~fl~ 261 (262)
T 3r0v_A 208 PTLVMDGGASPAWIRHTAQELADTIP--------------NARYVTLENQTHT-VAP----DAIAPVLVEFFT 261 (262)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHST--------------TEEEEECCCSSSS-CCH----HHHHHHHHHHHC
T ss_pred CEEEEeecCCCCCCHHHHHHHHHhCC--------------CCeEEEecCCCcc-cCH----HHHHHHHHHHHh
Confidence 99999999999999888877776653 2588999999994 221 244556777774
No 130
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.62 E-value=5.3e-15 Score=141.79 Aligned_cols=181 Identities=10% Similarity=-0.064 Sum_probs=121.7
Q ss_pred CccEEEEEcCCCCccC-CCCcChhHHHHHHhc-CcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCC
Q 004766 480 SHPCLLYGYGGFNISV-TPSFSVSRTILMRHL-GAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 557 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~-~~~~~~~~~~~l~~~-G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 557 (732)
+.|+||++||+.+... ...|...+...|.++ ||.|+++|+||.+. . ++...++.+++.--
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~--------------~----~~~~~~~~~~~~l~ 64 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT--------------A----RESIWLPFMETELH 64 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT--------------C----CHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc--------------c----cHHHHHHHHHHHhC
Confidence 5689999999887642 223444345667756 99999999998431 0 22333444444311
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccc-cCCCCCHHHHHHHHhcCcccCCC
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSD-FGCSEEEEEFYWLIKYSPLHNVR 636 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~-~g~p~~~~~~~~~~~~sp~~~~~ 636 (732)
. .+++.++|+|+||++++.++.++| ++++|+..|......... ..... +..+... +.+ .
T Consensus 65 ~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~~---------~ 124 (194)
T 2qs9_A 65 C-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDEN-----ERASGYFTRPWQW---EKI---------K 124 (194)
T ss_dssp C-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHH-----HHHTSTTSSCCCH---HHH---------H
T ss_pred c-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhh-----hHHHhhhcccccH---HHH---------H
Confidence 1 378999999999999999999999 899998888764321100 00011 1122111 111 1
Q ss_pred CCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHH
Q 004766 637 RPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAA 716 (732)
Q Consensus 637 ~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 716 (732)
. ..+|+|+++|.+|..||+.++.++++.+ . .++.+++++||....... +.++
T Consensus 125 ~----------~~~p~lii~G~~D~~vp~~~~~~~~~~~-~--------------~~~~~~~~~gH~~~~~~p---~~~~ 176 (194)
T 2qs9_A 125 A----------NCPYIVQFGSTDDPFLPWKEQQEVADRL-E--------------TKLHKFTDCGHFQNTEFH---ELIT 176 (194)
T ss_dssp H----------HCSEEEEEEETTCSSSCHHHHHHHHHHH-T--------------CEEEEESSCTTSCSSCCH---HHHH
T ss_pred h----------hCCCEEEEEeCCCCcCCHHHHHHHHHhc-C--------------CeEEEeCCCCCccchhCH---HHHH
Confidence 1 4579999999999999999999988877 4 278899999999765432 4556
Q ss_pred HHHHHHHHHh
Q 004766 717 DRYGFMAKML 726 (732)
Q Consensus 717 ~~~~fl~~~l 726 (732)
.++.||.+..
T Consensus 177 ~~~~fl~~~~ 186 (194)
T 2qs9_A 177 VVKSLLKVPA 186 (194)
T ss_dssp HHHHHHTCCC
T ss_pred HHHHHHHhhh
Confidence 6778987654
No 131
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.62 E-value=8.4e-15 Score=140.05 Aligned_cols=183 Identities=11% Similarity=0.006 Sum_probs=122.4
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCC
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 559 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 559 (732)
..|+||++||..+.... .|...+...|.++||.|+++|+|.++. .+++++.+.+..+++.-
T Consensus 3 g~p~vv~~HG~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~~~---------------~~~~~~~~~~~~~~~~~--- 63 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTN-HWFPWLKKRLLADGVQADILNMPNPLQ---------------PRLEDWLDTLSLYQHTL--- 63 (192)
T ss_dssp -CCEEEEECCTTCCTTS-TTHHHHHHHHHHTTCEEEEECCSCTTS---------------CCHHHHHHHHHTTGGGC---
T ss_pred CCCEEEEEcCCCCCcch-hHHHHHHHHHHhCCcEEEEecCCCCCC---------------CCHHHHHHHHHHHHHhc---
Confidence 35889999998775431 344444445655999999999993221 14566666666555442
Q ss_pred CCcEEEEecChhHHHHHHHHhhCCC--eeeEEEEcCCcccccccccCCCCCccccccC-CCCCHHHHHHHHhcCcccCCC
Q 004766 560 SRKLCIEGGSNGGLLVGACINQRPD--LFGCALAHVGVMDMLRYHKFTIGHAWVSDFG-CSEEEEEFYWLIKYSPLHNVR 636 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~p~--~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g-~p~~~~~~~~~~~~sp~~~~~ 636 (732)
.+++.++|+|+||++++.++.++|+ +++++|+..|+........ . ...|. .|.+.+ . +.
T Consensus 64 ~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~-----~-~~~~~~~~~~~~---~---------~~ 125 (192)
T 1uxo_A 64 HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQ-----M-LDEFTQGSFDHQ---K---------II 125 (192)
T ss_dssp CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCG-----G-GGGGTCSCCCHH---H---------HH
T ss_pred cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccch-----h-hhhhhhcCCCHH---H---------HH
Confidence 5799999999999999999999999 9999999998765422111 0 01121 122211 1 11
Q ss_pred CCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHH
Q 004766 637 RPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAA 716 (732)
Q Consensus 637 ~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 716 (732)
+ +.+|+|+++|.+|..||+.++.++++.+ . ..+++++++||....... +.+.
T Consensus 126 ~----------~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~--------------~~~~~~~~~gH~~~~~~~---~~~~ 177 (192)
T 1uxo_A 126 E----------SAKHRAVIASKDDQIVPFSFSKDLAQQI-D--------------AALYEVQHGGHFLEDEGF---TSLP 177 (192)
T ss_dssp H----------HEEEEEEEEETTCSSSCHHHHHHHHHHT-T--------------CEEEEETTCTTSCGGGTC---SCCH
T ss_pred h----------hcCCEEEEecCCCCcCCHHHHHHHHHhc-C--------------ceEEEeCCCcCccccccc---ccHH
Confidence 1 4569999999999999999988887766 3 378899999999754321 1122
Q ss_pred HHHHHHHHHhC
Q 004766 717 DRYGFMAKMLG 727 (732)
Q Consensus 717 ~~~~fl~~~l~ 727 (732)
.+.+||.+.+.
T Consensus 178 ~~~~~l~~~l~ 188 (192)
T 1uxo_A 178 IVYDVLTSYFS 188 (192)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 35566665553
No 132
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.62 E-value=3.4e-15 Score=153.75 Aligned_cols=222 Identities=12% Similarity=0.009 Sum_probs=138.8
Q ss_pred CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCc
Q 004766 460 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQ 539 (732)
Q Consensus 460 dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~ 539 (732)
+| .++.+... ++.|+||++||..+... .|......++. +||.|+++|+||.|.... ....
T Consensus 17 ~g-~~l~~~~~--------g~~~~vv~~HG~~~~~~--~~~~~~~~l~~-~g~~v~~~d~~G~G~S~~--------~~~~ 76 (309)
T 3u1t_A 17 EG-ATIAYVDE--------GSGQPVLFLHGNPTSSY--LWRNIIPYVVA-AGYRAVAPDLIGMGDSAK--------PDIE 76 (309)
T ss_dssp TT-EEEEEEEE--------ECSSEEEEECCTTCCGG--GGTTTHHHHHH-TTCEEEEECCTTSTTSCC--------CSSC
T ss_pred CC-eEEEEEEc--------CCCCEEEEECCCcchhh--hHHHHHHHHHh-CCCEEEEEccCCCCCCCC--------CCcc
Confidence 78 88776543 23689999999876643 34444444466 899999999999886432 1123
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccc-----------------c
Q 004766 540 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY-----------------H 602 (732)
Q Consensus 540 ~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~-----------------~ 602 (732)
.+++++.+.+..+++. ...+++.++|+|+||++++.++.++|++++++|+..|....... .
T Consensus 77 ~~~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (309)
T 3u1t_A 77 YRLQDHVAYMDGFIDA--LGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDL 154 (309)
T ss_dssp CCHHHHHHHHHHHHHH--HTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHH--cCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHH
Confidence 4567777666666654 23468999999999999999999999999999988765432200 0
Q ss_pred cCC--------CCCcccc----c--cCCCCCHHHHHHHHh-----------------cCcc--------------cCCCC
Q 004766 603 KFT--------IGHAWVS----D--FGCSEEEEEFYWLIK-----------------YSPL--------------HNVRR 637 (732)
Q Consensus 603 ~~~--------~~~~~~~----~--~g~p~~~~~~~~~~~-----------------~sp~--------------~~~~~ 637 (732)
... ....+.. . ......++..+.+.. .... ..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 233 (309)
T 3u1t_A 155 RTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLM- 233 (309)
T ss_dssp TSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHH-
T ss_pred hccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhcc-
Confidence 000 0000000 0 001111211111111 0000 0011
Q ss_pred CCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHH
Q 004766 638 PWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAAD 717 (732)
Q Consensus 638 ~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 717 (732)
.+..|+|+++|.+|..+|+..+.++.+.+.. ..+.+++++||...... ..+....
T Consensus 234 ---------~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~--------------~~~~~~~~~gH~~~~~~--p~~~~~~ 288 (309)
T 3u1t_A 234 ---------ASPIPKLLFHAEPGALAPKPVVDYLSENVPN--------------LEVRFVGAGTHFLQEDH--PHLIGQG 288 (309)
T ss_dssp ---------HCCSCEEEEEEEECSSSCHHHHHHHHHHSTT--------------EEEEEEEEESSCHHHHC--HHHHHHH
T ss_pred ---------cCCCCEEEEecCCCCCCCHHHHHHHHhhCCC--------------CEEEEecCCcccchhhC--HHHHHHH
Confidence 2578999999999999999888787776542 35566689999754322 2355667
Q ss_pred HHHHHHHHhCCC
Q 004766 718 RYGFMAKMLGAS 729 (732)
Q Consensus 718 ~~~fl~~~l~~~ 729 (732)
+.+||.++....
T Consensus 289 i~~fl~~~~~~~ 300 (309)
T 3u1t_A 289 IADWLRRNKPHA 300 (309)
T ss_dssp HHHHHHHHCCCC
T ss_pred HHHHHHhcchhh
Confidence 889999886543
No 133
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.62 E-value=3.1e-15 Score=151.33 Aligned_cols=118 Identities=14% Similarity=0.089 Sum_probs=85.8
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| .++.+... ++.|+||++||..+.... |.. +...|. .||.|+++|.||.|..... ....
T Consensus 10 ~~~-~~~~y~~~--------g~~~~vv~~HG~~~~~~~--~~~-~~~~L~-~~~~vi~~d~~G~G~s~~~------~~~~ 70 (278)
T 3oos_A 10 TPR-GKFEYFLK--------GEGPPLCVTHLYSEYNDN--GNT-FANPFT-DHYSVYLVNLKGCGNSDSA------KNDS 70 (278)
T ss_dssp ETT-EEEEEEEE--------CSSSEEEECCSSEECCTT--CCT-TTGGGG-GTSEEEEECCTTSTTSCCC------SSGG
T ss_pred cCC-ceEEEEec--------CCCCeEEEEcCCCcchHH--HHH-HHHHhh-cCceEEEEcCCCCCCCCCC------CCcc
Confidence 367 67765432 356789999998766543 332 235577 5999999999998864321 0112
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccc
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 597 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d 597 (732)
..+++|+.+.+..+++. .+.+++.++|+|+||.+++.++.++|++++++|+..|...
T Consensus 71 ~~~~~~~~~~~~~~~~~--l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 127 (278)
T 3oos_A 71 EYSMTETIKDLEAIREA--LYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAAS 127 (278)
T ss_dssp GGSHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB
T ss_pred cCcHHHHHHHHHHHHHH--hCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccc
Confidence 33567777777666655 3446899999999999999999999999999999998876
No 134
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.62 E-value=2.2e-15 Score=160.36 Aligned_cols=249 Identities=10% Similarity=0.039 Sum_probs=146.6
Q ss_pred EEEEccCCCeeEEEEEEEcCC-CCCCCCccEEEEEcCCCCccCC----------CC-cChhH--HHHHHhcCcEEEEEcc
Q 004766 454 VFVPSKDGSTKIPMFIVSKKN-IKLDGSHPCLLYGYGGFNISVT----------PS-FSVSR--TILMRHLGAVFCIANI 519 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~-~~~~~~~P~vv~~hG~~~~~~~----------~~-~~~~~--~~~l~~~G~~v~~~~~ 519 (732)
..++..+| ..|...|.+..- .....+.|+||++||..+.... .. |.... ...|..+||.|+++|.
T Consensus 15 ~~~~~~~g-~~l~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~ 93 (377)
T 3i1i_A 15 KEYTFENG-RTIPVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDN 93 (377)
T ss_dssp EEEECTTS-CEEEEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECC
T ss_pred cceeecCC-CEeeeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecc
Confidence 35666778 766434444321 1112346999999998877543 11 22211 0223348999999999
Q ss_pred cCCCC--------CchhHHhc--cc---ccCCccHHHHHHHHHHHHHHcCCCCCCcEE-EEecChhHHHHHHHHhhCCCe
Q 004766 520 RGGGE--------YGEEWHKG--GA---LAKKQNCFDDFISASEYLISAGYTQSRKLC-IEGGSNGGLLVGACINQRPDL 585 (732)
Q Consensus 520 rG~g~--------~g~~~~~~--~~---~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~p~~ 585 (732)
||.|. .|..-... +. ......+++|+.+.+..+++. ...+++. ++|||+||.+++.++.++|++
T Consensus 94 ~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~--l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~ 171 (377)
T 3i1i_A 94 LCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKD--MGIARLHAVMGPSAGGMIAQQWAVHYPHM 171 (377)
T ss_dssp TTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCCCBSEEEEETHHHHHHHHHHHHCTTT
T ss_pred cccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHH--cCCCcEeeEEeeCHhHHHHHHHHHHChHH
Confidence 97743 11110000 00 011234778888888887765 3445785 999999999999999999999
Q ss_pred eeEEEE-cCCcccccc-----------c---cc-C------------------------CCCCcc-ccccCC--------
Q 004766 586 FGCALA-HVGVMDMLR-----------Y---HK-F------------------------TIGHAW-VSDFGC-------- 616 (732)
Q Consensus 586 f~a~v~-~~p~~d~~~-----------~---~~-~------------------------~~~~~~-~~~~g~-------- 616 (732)
++++|+ ..+...... . .. + .....+ ...++.
T Consensus 172 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (377)
T 3i1i_A 172 VERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPY 251 (377)
T ss_dssp BSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGG
T ss_pred HHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhcccccc
Confidence 999998 444322000 0 00 0 000000 001111
Q ss_pred ----------------------CCCHHHHHH----HHhcCc-------ccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCC
Q 004766 617 ----------------------SEEEEEFYW----LIKYSP-------LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRV 663 (732)
Q Consensus 617 ----------------------p~~~~~~~~----~~~~sp-------~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v 663 (732)
..+...+.. +..+.+ ...+. .+..|+||++|.+|..|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~i~~Pvlii~G~~D~~~ 321 (377)
T 3i1i_A 252 EKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALS----------NVEANVLMIPCKQDLLQ 321 (377)
T ss_dssp TCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHH----------TCCSEEEEECBTTCSSS
T ss_pred ccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHh----------hCCCCEEEEecCCcccc
Confidence 001111110 111111 01112 27789999999999999
Q ss_pred CchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCC-CCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 664 VPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERK-AGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 664 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
|+..+.++++.++.. +..++++++++ +||....... .+..+.+.+||.+++.
T Consensus 322 ~~~~~~~~~~~~~~~----------g~~~~~~~i~~~~gH~~~~e~p--~~~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 322 PSRYNYKMVDLLQKQ----------GKYAEVYEIESINGHMAGVFDI--HLFEKKVYEFLNRKVS 374 (377)
T ss_dssp CTHHHHHHHHHHHHT----------TCCEEECCBCCTTGGGHHHHCG--GGTHHHHHHHHHSCCS
T ss_pred CHHHHHHHHHHHHhc----------CCCceEEEcCCCCCCcchhcCH--HHHHHHHHHHHHhhhh
Confidence 999999999999875 56689999998 9997543222 2345567889987654
No 135
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.62 E-value=6.3e-16 Score=150.08 Aligned_cols=192 Identities=11% Similarity=-0.010 Sum_probs=129.7
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChh-HHHHHHhcCcEEEEEcccCCCCCchhHHhcccccC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVS-RTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 537 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~-~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 537 (732)
.+| .++.+..+.|++ +++.|+||++||+.+... .|... ....|+++||.|+++|+||.|........ . .
T Consensus 14 ~~g-~~l~~~~~~p~~---~~~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~---~-~ 83 (210)
T 1imj_A 14 VQG-QALFFREALPGS---GQARFSVLLLHGIRFSSE--TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAP---A-P 83 (210)
T ss_dssp ETT-EEECEEEEECSS---SCCSCEEEECCCTTCCHH--HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCS---S-C
T ss_pred eCC-eEEEEEEeCCCC---CCCCceEEEECCCCCccc--eeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCc---c-h
Confidence 388 999999998865 246899999999876542 33332 34556669999999999997643221100 0 0
Q ss_pred CccHH--HHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccC
Q 004766 538 KQNCF--DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFG 615 (732)
Q Consensus 538 ~~~~~--~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g 615 (732)
-.... +|+.+.++.+ +.++++++|+|+||.++..++.++|++++++|+..|..... +
T Consensus 84 ~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~----------~----- 142 (210)
T 1imj_A 84 IGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK----------I----- 142 (210)
T ss_dssp TTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG----------S-----
T ss_pred hhhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc----------c-----
Confidence 01111 4555555544 34689999999999999999999999999999988864310 0
Q ss_pred CCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEE
Q 004766 616 CSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGR 695 (732)
Q Consensus 616 ~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 695 (732)
.... +.. +..|+|+++|.+|. +++..+.++ +.+ ....+.
T Consensus 143 ---~~~~------------~~~----------~~~p~l~i~g~~D~-~~~~~~~~~-~~~--------------~~~~~~ 181 (210)
T 1imj_A 143 ---NAAN------------YAS----------VKTPALIVYGDQDP-MGQTSFEHL-KQL--------------PNHRVL 181 (210)
T ss_dssp ---CHHH------------HHT----------CCSCEEEEEETTCH-HHHHHHHHH-TTS--------------SSEEEE
T ss_pred ---cchh------------hhh----------CCCCEEEEEcCccc-CCHHHHHHH-hhC--------------CCCCEE
Confidence 0111 112 56799999999999 987776655 322 246889
Q ss_pred EeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 696 IERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 696 ~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
+++++||....... ....+.+.+||.+
T Consensus 182 ~~~~~~H~~~~~~~--~~~~~~i~~fl~~ 208 (210)
T 1imj_A 182 IMKGAGHPCYLDKP--EEWHTGLLDFLQG 208 (210)
T ss_dssp EETTCCTTHHHHCH--HHHHHHHHHHHHT
T ss_pred EecCCCcchhhcCH--HHHHHHHHHHHHh
Confidence 99999998532221 2345566777754
No 136
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.61 E-value=1.8e-14 Score=146.52 Aligned_cols=226 Identities=13% Similarity=0.028 Sum_probs=131.1
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccC
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 537 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 537 (732)
+.+| .++.+... +..|.||++||..+... .|.. ....|.++||.|+++|.||.|..... .
T Consensus 9 ~~~g-~~l~y~~~--------g~g~pvvllHG~~~~~~--~~~~-~~~~L~~~g~~vi~~D~~G~G~S~~~--------~ 68 (277)
T 1brt_A 9 NSTS-IDLYYEDH--------GTGQPVVLIHGFPLSGH--SWER-QSAALLDAGYRVITYDRRGFGQSSQP--------T 68 (277)
T ss_dssp TTEE-EEEEEEEE--------CSSSEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEEECCTTSTTSCCC--------S
T ss_pred cCCC-cEEEEEEc--------CCCCeEEEECCCCCcHH--HHHH-HHHHHhhCCCEEEEeCCCCCCCCCCC--------C
Confidence 4577 77765433 12345999999876542 3443 34556658999999999998865321 1
Q ss_pred CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCC-eeeEEEEcCCccccccc-ccCCCC--------
Q 004766 538 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD-LFGCALAHVGVMDMLRY-HKFTIG-------- 607 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-~f~a~v~~~p~~d~~~~-~~~~~~-------- 607 (732)
...+++++.+.+..+++. .+.+++.++|+|+||.+++.++.++|+ +++++|+..|....... .....+
T Consensus 69 ~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (277)
T 1brt_A 69 TGYDYDTFAADLNTVLET--LDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFD 146 (277)
T ss_dssp SCCSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHH
T ss_pred CCccHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHH
Confidence 123455555544444443 234689999999999999999999999 99999988764321100 000000
Q ss_pred ----------Cccc----c-cc------CCCCCHHHHHHHHh----cCc------ccCCCCCCCCCCCCCCCCCeEEEEe
Q 004766 608 ----------HAWV----S-DF------GCSEEEEEFYWLIK----YSP------LHNVRRPWEQNPDKPFQYPSTLLLT 656 (732)
Q Consensus 608 ----------~~~~----~-~~------g~p~~~~~~~~~~~----~sp------~~~~~~~~~~~~~~~~~~~p~Li~~ 656 (732)
..+. . .+ +....++..+.+.. .++ +..... +..+....+..|+|+++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~i~~P~lii~ 224 (277)
T 1brt_A 147 GIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYT--DFRADIPRIDVPALILH 224 (277)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTC--CCTTTGGGCCSCEEEEE
T ss_pred HHHHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhc--cchhhcccCCCCeEEEe
Confidence 0000 0 01 11122222211110 000 000000 00011124789999999
Q ss_pred eCCCCCCCchHH-HHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 657 ADHDDRVVPLHS-LKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 657 g~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
|.+|..+|+..+ .++.+.+.. .++++++++||...... ..+..+.+.+||.
T Consensus 225 G~~D~~~~~~~~~~~~~~~~~~--------------~~~~~i~~~gH~~~~e~--p~~~~~~i~~fl~ 276 (277)
T 1brt_A 225 GTGDRTLPIENTARVFHKALPS--------------AEYVEVEGAPHGLLWTH--AEEVNTALLAFLA 276 (277)
T ss_dssp ETTCSSSCGGGTHHHHHHHCTT--------------SEEEEETTCCTTHHHHT--HHHHHHHHHHHHH
T ss_pred cCCCccCChHHHHHHHHHHCCC--------------CcEEEeCCCCcchhhhC--HHHHHHHHHHHHh
Confidence 999999999887 666655432 47888999999864322 2345556777874
No 137
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.61 E-value=3.4e-14 Score=143.96 Aligned_cols=118 Identities=22% Similarity=0.182 Sum_probs=81.8
Q ss_pred EEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccc
Q 004766 456 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 535 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~ 535 (732)
+++.|| .++.+... +..|.||++||..+... .|... ...|.++||.|+++|.||.|.....
T Consensus 3 ~~~~~g-~~l~y~~~--------g~~~~vvllHG~~~~~~--~~~~~-~~~L~~~g~~vi~~D~~G~G~S~~~------- 63 (273)
T 1a8s_A 3 FTTRDG-TQIYYKDW--------GSGQPIVFSHGWPLNAD--SWESQ-MIFLAAQGYRVIAHDRRGHGRSSQP------- 63 (273)
T ss_dssp EECTTS-CEEEEEEE--------SCSSEEEEECCTTCCGG--GGHHH-HHHHHHTTCEEEEECCTTSTTSCCC-------
T ss_pred EecCCC-cEEEEEEc--------CCCCEEEEECCCCCcHH--HHhhH-HhhHhhCCcEEEEECCCCCCCCCCC-------
Confidence 567788 88765433 23478999999876542 34443 3455558999999999998865321
Q ss_pred cCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC-CCeeeEEEEcCCc
Q 004766 536 AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVGV 595 (732)
Q Consensus 536 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~~f~a~v~~~p~ 595 (732)
....+++++.+.+..+++. .+.+++.++|+|+||++++.++.++ |++++++|+..+.
T Consensus 64 -~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 121 (273)
T 1a8s_A 64 -WSGNDMDTYADDLAQLIEH--LDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAV 121 (273)
T ss_dssp -SSCCSHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred -CCCCCHHHHHHHHHHHHHH--hCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEccc
Confidence 1123455555555555543 2346899999999999998866665 9999999887653
No 138
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.61 E-value=6.3e-14 Score=142.10 Aligned_cols=223 Identities=14% Similarity=0.075 Sum_probs=131.6
Q ss_pred EEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccc
Q 004766 456 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 535 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~ 535 (732)
+++.|| .++.+... +..|.||++||..+... .|... ...|.++||.|+++|.||.|.....
T Consensus 3 ~~~~~g-~~l~y~~~--------g~g~~vvllHG~~~~~~--~w~~~-~~~l~~~g~~vi~~D~~G~G~S~~~------- 63 (274)
T 1a8q_A 3 CTTRDG-VEIFYKDW--------GQGRPVVFIHGWPLNGD--AWQDQ-LKAVVDAGYRGIAHDRRGHGHSTPV------- 63 (274)
T ss_dssp EECTTS-CEEEEEEE--------CSSSEEEEECCTTCCGG--GGHHH-HHHHHHTTCEEEEECCTTSTTSCCC-------
T ss_pred EEccCC-CEEEEEec--------CCCceEEEECCCcchHH--HHHHH-HHHHHhCCCeEEEEcCCCCCCCCCC-------
Confidence 567788 88765433 23478999999876543 34433 3445558999999999998865321
Q ss_pred cCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC-CCeeeEEEEcCCcccccccc-cCCCC--Cc--
Q 004766 536 AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVGVMDMLRYH-KFTIG--HA-- 609 (732)
Q Consensus 536 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~~f~a~v~~~p~~d~~~~~-~~~~~--~~-- 609 (732)
....+++++.+.+..+++. .+.+++.++|||+||++++.++.++ |++++++|+..|........ ....+ ..
T Consensus 64 -~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 140 (274)
T 1a8q_A 64 -WDGYDFDTFADDLNDLLTD--LDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVF 140 (274)
T ss_dssp -SSCCSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHH
T ss_pred -CCCCcHHHHHHHHHHHHHH--cCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHH
Confidence 1123455555555555543 2346899999999999998877665 99999998877542110000 00000 00
Q ss_pred -------------cc-----cccC-----CCCCHHHHHH----------------HHhc---CcccCCCCCCCCCCCCCC
Q 004766 610 -------------WV-----SDFG-----CSEEEEEFYW----------------LIKY---SPLHNVRRPWEQNPDKPF 647 (732)
Q Consensus 610 -------------~~-----~~~g-----~p~~~~~~~~----------------~~~~---sp~~~~~~~~~~~~~~~~ 647 (732)
+. ..++ ....++..+. +..+ +....+. .
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~ 210 (274)
T 1a8q_A 141 DALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLK----------K 210 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHT----------T
T ss_pred HHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhh----------c
Confidence 00 0011 0011111111 1111 1111222 2
Q ss_pred CCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 648 QYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 648 ~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
+..|+|+++|.+|..||+.+..+..+++. ...++++++++||.......+..+..+.+.+||.
T Consensus 211 i~~P~lii~G~~D~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 211 FDIPTLVVHGDDDQVVPIDATGRKSAQII-------------PNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp CCSCEEEEEETTCSSSCGGGTHHHHHHHS-------------TTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred CCCCEEEEecCcCCCCCcHHHHHHHHhhC-------------CCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 78999999999999999986555444332 2358899999999887541112345566778874
No 139
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.61 E-value=7.7e-12 Score=133.67 Aligned_cols=242 Identities=11% Similarity=0.060 Sum_probs=158.0
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
+..++|||||++|+++...+ .+|++||+.+++.+...........++|+|||+.|+++..
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d----~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~---------------- 93 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHS----NDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNM---------------- 93 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGG----TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET----------------
T ss_pred cceEEECCCCCEEEEECCCC----CeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEEC----------------
Confidence 46889999999987775333 3799999999986543222224578999999999988742
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 293 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 293 (732)
....|+++++.++.. +..+... .....++|+|||++|++.... ...|+++|+.++.
T Consensus 94 --~~~~v~v~d~~~~~~--~~~~~~~---~~~~~~~~s~dg~~l~~~~~~----~~~v~~~d~~~~~------------- 149 (391)
T 1l0q_A 94 --ASSTLSVIDTTSNTV--AGTVKTG---KSPLGLALSPDGKKLYVTNNG----DKTVSVINTVTKA------------- 149 (391)
T ss_dssp --TTTEEEEEETTTTEE--EEEEECS---SSEEEEEECTTSSEEEEEETT----TTEEEEEETTTTE-------------
T ss_pred --CCCEEEEEECCCCeE--EEEEeCC---CCcceEEECCCCCEEEEEeCC----CCEEEEEECCCCc-------------
Confidence 224699999987542 2223222 234688999999999776532 2468999987642
Q ss_pred CcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEEEEEecCCe
Q 004766 294 PFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVK 372 (732)
Q Consensus 294 ~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~~~~~~~g~ 372 (732)
....+..+.......|+|+|+.+++.... ...|+.+|+.++. ....+... ..+..+.+++++ .+++.......
T Consensus 150 ~~~~~~~~~~~~~~~~~~dg~~l~~~~~~---~~~v~~~d~~~~~-~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~ 223 (391)
T 1l0q_A 150 VINTVSVGRSPKGIAVTPDGTKVYVANFD---SMSISVIDTVTNS-VIDTVKVE--AAPSGIAVNPEGTKAYVTNVDKYF 223 (391)
T ss_dssp EEEEEECCSSEEEEEECTTSSEEEEEETT---TTEEEEEETTTTE-EEEEEECS--SEEEEEEECTTSSEEEEEEECSSC
T ss_pred EEEEEecCCCcceEEECCCCCEEEEEeCC---CCEEEEEECCCCe-EEEEEecC--CCccceEECCCCCEEEEEecCcCC
Confidence 12222222222233589999988766543 3479999998875 33334433 456778888754 45555542234
Q ss_pred eEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 373 YVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 373 ~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
..|++||+.+++.+..+..+. .+..+.++++++.++++.+. -..++.+|+.++
T Consensus 224 ~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~---d~~v~v~d~~~~ 276 (391)
T 1l0q_A 224 NTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSF---XNTVSVIDTATN 276 (391)
T ss_dssp CEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETT---TTEEEEEETTTT
T ss_pred CcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCC---CCEEEEEECCCC
Confidence 689999998787655555433 34567778888877665432 256777777655
No 140
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.60 E-value=5.1e-15 Score=149.97 Aligned_cols=209 Identities=12% Similarity=0.070 Sum_probs=132.6
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
+..|+||++||..+... .|.. ....|+ ++|.|+++|.||.|.... ......+++++.+.+..+++. .
T Consensus 13 ~~~~~vvllHG~~~~~~--~w~~-~~~~L~-~~~~vi~~Dl~G~G~S~~-------~~~~~~~~~~~a~dl~~~l~~--l 79 (268)
T 3v48_A 13 ADAPVVVLISGLGGSGS--YWLP-QLAVLE-QEYQVVCYDQRGTGNNPD-------TLAEDYSIAQMAAELHQALVA--A 79 (268)
T ss_dssp TTCCEEEEECCTTCCGG--GGHH-HHHHHH-TTSEEEECCCTTBTTBCC-------CCCTTCCHHHHHHHHHHHHHH--T
T ss_pred CCCCEEEEeCCCCccHH--HHHH-HHHHHh-hcCeEEEECCCCCCCCCC-------CccccCCHHHHHHHHHHHHHH--c
Confidence 35689999999876542 4444 345677 789999999999885321 111234677777777776665 2
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc------------------------CCCCCcccccc
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK------------------------FTIGHAWVSDF 614 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------------------------~~~~~~~~~~~ 614 (732)
..+++.++|+|+||.+++.++.++|++++++|+..+......... +.....|....
T Consensus 80 ~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (268)
T 3v48_A 80 GIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAAR 159 (268)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTT
T ss_pred CCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhcc
Confidence 336899999999999999999999999999998776432110000 00000010000
Q ss_pred -------------CCCCCHHH---HHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHh
Q 004766 615 -------------GCSEEEEE---FYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYV 678 (732)
Q Consensus 615 -------------g~p~~~~~---~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~ 678 (732)
..+..... +..+...+....+. .+..|+||++|++|..+|+..+.++.+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~----------~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~- 228 (268)
T 3v48_A 160 APRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHAD----------RIRCPVQIICASDDLLVPTACSSELHAALPD- 228 (268)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGG----------GCCSCEEEEEETTCSSSCTHHHHHHHHHCSS-
T ss_pred cccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhh----------cCCCCeEEEEeCCCcccCHHHHHHHHHhCCc-
Confidence 00000000 11112222112222 3889999999999999999988888766542
Q ss_pred hcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 679 LCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
..+.+++++||....... ....+.+.+||.+.+
T Consensus 229 -------------~~~~~~~~~GH~~~~e~p--~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 229 -------------SQKMVMPYGGHACNVTDP--ETFNALLLNGLASLL 261 (268)
T ss_dssp -------------EEEEEESSCCTTHHHHCH--HHHHHHHHHHHHHHH
T ss_pred -------------CeEEEeCCCCcchhhcCH--HHHHHHHHHHHHHhc
Confidence 478889999998643322 345567788988754
No 141
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.59 E-value=5.6e-15 Score=146.49 Aligned_cols=186 Identities=13% Similarity=0.069 Sum_probs=121.0
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHH----
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLIS---- 554 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~---- 554 (732)
++.|+||++||..+.... |. . ...|. +||.|+++|+||.|... .....+++++.+.+..+++
T Consensus 14 ~~~~~vv~~hG~~~~~~~--~~-~-~~~l~-~g~~v~~~d~~g~g~s~---------~~~~~~~~~~~~~~~~~~~~~~~ 79 (245)
T 3e0x_A 14 KSPNTLLFVHGSGCNLKI--FG-E-LEKYL-EDYNCILLDLKGHGESK---------GQCPSTVYGYIDNVANFITNSEV 79 (245)
T ss_dssp TCSCEEEEECCTTCCGGG--GT-T-GGGGC-TTSEEEEECCTTSTTCC---------SCCCSSHHHHHHHHHHHHHHCTT
T ss_pred CCCCEEEEEeCCcccHHH--HH-H-HHHHH-hCCEEEEecCCCCCCCC---------CCCCcCHHHHHHHHHHHHHhhhh
Confidence 357899999998776543 33 2 23355 89999999999988643 1123356666666665551
Q ss_pred cCCCCCCcEEEEecChhHHHHHHHHhh-CCCeeeEEEEcCCccccccccc--------CC------------CCCccccc
Q 004766 555 AGYTQSRKLCIEGGSNGGLLVGACINQ-RPDLFGCALAHVGVMDMLRYHK--------FT------------IGHAWVSD 613 (732)
Q Consensus 555 ~~~~d~~~i~i~G~S~GG~l~~~~~~~-~p~~f~a~v~~~p~~d~~~~~~--------~~------------~~~~~~~~ 613 (732)
+.... ++.++|+|+||.++..++.+ +|+ ++++|+..|..+...... .. ....+...
T Consensus 80 ~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (245)
T 3e0x_A 80 TKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEK 156 (245)
T ss_dssp TTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHHHH
T ss_pred HhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHHHH
Confidence 11223 89999999999999999999 999 999999998776521110 00 00000000
Q ss_pred c-CC-CCCHHH----HHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCC
Q 004766 614 F-GC-SEEEEE----FYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSP 687 (732)
Q Consensus 614 ~-g~-p~~~~~----~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 687 (732)
+ .. ..++.. +..+..++....+.+ +..|+|+++|.+|..||+..+.++++.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----------- 215 (245)
T 3e0x_A 157 YFETLEKDPDIMINDLIACKLIDLVDNLKN----------IDIPVKAIVAKDELLTLVEYSEIIKKEVE----------- 215 (245)
T ss_dssp HHTTSCSSHHHHHHHHHHHHHCBCGGGGGG----------CCSCEEEEEETTCSSSCHHHHHHHHHHSS-----------
T ss_pred HHHHHhcCcHHHHHHHHHhccccHHHHHHh----------CCCCEEEEEeCCCCCCCHHHHHHHHHHcC-----------
Confidence 0 00 012211 122233344444444 78899999999999999998877776643
Q ss_pred CCCCEEEEEeCCCCCCCC
Q 004766 688 QTNPIIGRIERKAGHGVG 705 (732)
Q Consensus 688 ~~~~~~~~~~~~~gH~~~ 705 (732)
.+++.+++++||...
T Consensus 216 ---~~~~~~~~~~gH~~~ 230 (245)
T 3e0x_A 216 ---NSELKIFETGKHFLL 230 (245)
T ss_dssp ---SEEEEEESSCGGGHH
T ss_pred ---CceEEEeCCCCcceE
Confidence 268899999999854
No 142
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.59 E-value=1.6e-14 Score=144.80 Aligned_cols=215 Identities=7% Similarity=-0.023 Sum_probs=130.8
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
.|+||++||..+... .|... ...|+++||.|+++|.||.|...... ....+++++.+.+..+++.-.. .
T Consensus 4 g~~vv~lHG~~~~~~--~~~~~-~~~l~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~l~~l~~-~ 72 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAW--IWYKL-KPLLESAGHRVTAVELAASGIDPRPI-------QAVETVDEYSKPLIETLKSLPE-N 72 (258)
T ss_dssp CCEEEEECCTTCCGG--GGTTH-HHHHHHTTCEEEEECCTTSTTCSSCG-------GGCCSHHHHHHHHHHHHHTSCT-T
T ss_pred CCcEEEECCCCCccc--cHHHH-HHHHHhCCCEEEEecCCCCcCCCCCC-------CccccHHHhHHHHHHHHHHhcc-c
Confidence 389999999887643 34443 45566589999999999988653221 1124566666666655554211 3
Q ss_pred CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc------C-CCCCcccc---------------------
Q 004766 561 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK------F-TIGHAWVS--------------------- 612 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------~-~~~~~~~~--------------------- 612 (732)
+++.++|+|+||+++..++.++|++++++|+..|......... . .....|..
T Consensus 73 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (258)
T 3dqz_A 73 EEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPK 152 (258)
T ss_dssp CCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHH
T ss_pred CceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHH
Confidence 7899999999999999999999999999998877543211000 0 00000100
Q ss_pred ----ccCCCCCHHHHHHHHh-cCcccC-------CCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhc
Q 004766 613 ----DFGCSEEEEEFYWLIK-YSPLHN-------VRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLC 680 (732)
Q Consensus 613 ----~~g~p~~~~~~~~~~~-~sp~~~-------~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~ 680 (732)
.+.....++....+.. ..+... .... ........|+|+++|.+|..||+..+.++.+.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--- 225 (258)
T 3dqz_A 153 FMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKF----SEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNV--- 225 (258)
T ss_dssp HHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCC----CTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSCC---
T ss_pred HHHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccc----cccccccCCEEEEECCCCeeeCHHHHHHHHHhCCc---
Confidence 0001111222222111 111111 0000 00112467999999999999999888777766542
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 681 TSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
..+++++++||....... .+..+.+.+|+.++|
T Consensus 226 -----------~~~~~~~~~gH~~~~~~p--~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 226 -----------SKVYEIDGGDHMVMLSKP--QKLFDSLSAIATDYM 258 (258)
T ss_dssp -----------SCEEEETTCCSCHHHHSH--HHHHHHHHHHHHHTC
T ss_pred -----------ccEEEcCCCCCchhhcCh--HHHHHHHHHHHHHhC
Confidence 277889999998654322 345566788888764
No 143
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.59 E-value=2.3e-14 Score=160.95 Aligned_cols=125 Identities=14% Similarity=0.144 Sum_probs=88.3
Q ss_pred EEEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHH
Q 004766 451 VHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWH 530 (732)
Q Consensus 451 ~~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~ 530 (732)
.+..++++.|| .++.+... ++.|+||++||+.+... .|... ...|.++||.|+++|+||.|.....
T Consensus 237 ~~~~~~~~~dg-~~l~~~~~--------g~~p~vv~~HG~~~~~~--~~~~~-~~~l~~~G~~v~~~D~~G~G~S~~~-- 302 (555)
T 3i28_A 237 MSHGYVTVKPR-VRLHFVEL--------GSGPAVCLCHGFPESWY--SWRYQ-IPALAQAGYRVLAMDMKGYGESSAP-- 302 (555)
T ss_dssp SEEEEEEEETT-EEEEEEEE--------CSSSEEEEECCTTCCGG--GGTTH-HHHHHHTTCEEEEECCTTSTTSCCC--
T ss_pred cceeEEEeCCC-cEEEEEEc--------CCCCEEEEEeCCCCchh--HHHHH-HHHHHhCCCEEEEecCCCCCCCCCC--
Confidence 34556677799 88876544 35689999999877643 44443 3456658999999999998864321
Q ss_pred hcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 531 KGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 531 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
......+++++.+.+..+++. .+.+++.++|||+||++++.++.++|++++++|+..|.
T Consensus 303 ----~~~~~~~~~~~~~d~~~~~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 361 (555)
T 3i28_A 303 ----PEIEEYCMEVLCKEMVTFLDK--LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 361 (555)
T ss_dssp ----SCGGGGSHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ----CCcccccHHHHHHHHHHHHHH--cCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccC
Confidence 111123355555544444433 24468999999999999999999999999999987664
No 144
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.59 E-value=7.4e-14 Score=142.35 Aligned_cols=117 Identities=17% Similarity=0.083 Sum_probs=79.1
Q ss_pred EccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccccc
Q 004766 457 PSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALA 536 (732)
Q Consensus 457 ~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~ 536 (732)
.+.+| .++.+... |+.|.||++||..+... .|...... |.++||.|+++|.||.|.....
T Consensus 12 ~~~~g-~~l~y~~~--------G~g~~vvllHG~~~~~~--~w~~~~~~-l~~~g~~vi~~D~~G~G~S~~~-------- 71 (281)
T 3fob_A 12 ENQAP-IEIYYEDH--------GTGKPVVLIHGWPLSGR--SWEYQVPA-LVEAGYRVITYDRRGFGKSSQP-------- 71 (281)
T ss_dssp ETTEE-EEEEEEEE--------SSSEEEEEECCTTCCGG--GGTTTHHH-HHHTTEEEEEECCTTSTTSCCC--------
T ss_pred CCCCc-eEEEEEEC--------CCCCeEEEECCCCCcHH--HHHHHHHH-HHhCCCEEEEeCCCCCCCCCCC--------
Confidence 34567 66655432 33567899999887654 34443434 4448999999999998865321
Q ss_pred CCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhh-CCCeeeEEEEcCCc
Q 004766 537 KKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ-RPDLFGCALAHVGV 595 (732)
Q Consensus 537 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~-~p~~f~a~v~~~p~ 595 (732)
....+++++.+.+..+++. ...+++.++|+|+||.+++.++.+ +|++++++|+..+.
T Consensus 72 ~~~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~ 129 (281)
T 3fob_A 72 WEGYEYDTFTSDLHQLLEQ--LELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAV 129 (281)
T ss_dssp SSCCSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred ccccCHHHHHHHHHHHHHH--cCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCC
Confidence 1234556666666555554 234689999999999877766555 58999999877654
No 145
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.59 E-value=7.9e-15 Score=147.69 Aligned_cols=210 Identities=11% Similarity=0.053 Sum_probs=129.8
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCC
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 559 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 559 (732)
..|+||++||..+... .|.. +...|. .||.|+++|+||.|........ .....+++++.+.+..+++. .+
T Consensus 19 ~~p~vv~~HG~~~~~~--~~~~-~~~~l~-~g~~v~~~D~~G~G~S~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~ 88 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQS--AWNR-ILPFFL-RDYRVVLYDLVCAGSVNPDFFD----FRRYTTLDPYVDDLLHILDA--LG 88 (269)
T ss_dssp CSSEEEEECCTTCCGG--GGTT-TGGGGT-TTCEEEEECCTTSTTSCGGGCC----TTTCSSSHHHHHHHHHHHHH--TT
T ss_pred CCCEEEEEeCCCCcHH--HHHH-HHHHHh-CCcEEEEEcCCCCCCCCCCCCC----ccccCcHHHHHHHHHHHHHh--cC
Confidence 4589999999876543 3333 335577 4999999999998875331111 11222456666666655554 24
Q ss_pred CCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCC-----------------Cccccc----cCCCC
Q 004766 560 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG-----------------HAWVSD----FGCSE 618 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~-----------------~~~~~~----~g~p~ 618 (732)
.+++.++|+|+||++++.++.++|++++++|+..|............. ..|... ...+.
T Consensus 89 ~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (269)
T 4dnp_A 89 IDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGAD 168 (269)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSS
T ss_pred CCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCC
Confidence 468999999999999999999999999999998886543221110000 000000 00111
Q ss_pred CHHHHH-------------------HHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhh
Q 004766 619 EEEEFY-------------------WLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVL 679 (732)
Q Consensus 619 ~~~~~~-------------------~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~ 679 (732)
.++..+ .+...+....+.+ +..|+|+++|.+|..||+..+.++.+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--- 235 (269)
T 4dnp_A 169 VPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGL----------VKVPCHIFQTARDHSVPASVATYLKNHLG--- 235 (269)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGG----------CCSCEEEEEEESBTTBCHHHHHHHHHHSS---
T ss_pred ChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhcc----------ccCCEEEEecCCCcccCHHHHHHHHHhCC---
Confidence 111111 1111222222333 78899999999999999998887776653
Q ss_pred cCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 680 CTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
..+++++++++||....... .+....+.+||.+
T Consensus 236 ----------~~~~~~~~~~~gH~~~~~~p--~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 236 ----------GKNTVHWLNIEGHLPHLSAP--TLLAQELRRALSH 268 (269)
T ss_dssp ----------SCEEEEEEEEESSCHHHHCH--HHHHHHHHHHHC-
T ss_pred ----------CCceEEEeCCCCCCccccCH--HHHHHHHHHHHhh
Confidence 22789999999998643222 2344566677654
No 146
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.58 E-value=1.8e-15 Score=152.74 Aligned_cols=220 Identities=13% Similarity=-0.000 Sum_probs=132.5
Q ss_pred CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHh-cCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 460 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH-LGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 460 dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
+| .++.+... ++.|+||++||..+... .|... ...|.+ +||.|+++|+||.|.....- .
T Consensus 9 ~g-~~l~y~~~--------g~~~~vv~lhG~~~~~~--~~~~~-~~~l~~~~g~~v~~~d~~G~G~s~~~~--------~ 68 (272)
T 3fsg_A 9 TR-SNISYFSI--------GSGTPIIFLHGLSLDKQ--STCLF-FEPLSNVGQYQRIYLDLPGMGNSDPIS--------P 68 (272)
T ss_dssp CT-TCCEEEEE--------CCSSEEEEECCTTCCHH--HHHHH-HTTSTTSTTSEEEEECCTTSTTCCCCS--------S
T ss_pred cC-CeEEEEEc--------CCCCeEEEEeCCCCcHH--HHHHH-HHHHhccCceEEEEecCCCCCCCCCCC--------C
Confidence 67 67765432 35678999999876532 23322 223553 59999999999987642211 1
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCC------Ccccc
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG------HAWVS 612 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~------~~~~~ 612 (732)
.+++++.+.+..+++.- .+.+++.++|+|+||.++..++.++|++++++|+..|............. ..+..
T Consensus 69 -~~~~~~~~~~~~~l~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (272)
T 3fsg_A 69 -STSDNVLETLIEAIEEI-IGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINP 146 (272)
T ss_dssp -CSHHHHHHHHHHHHHHH-HTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCC
T ss_pred -CCHHHHHHHHHHHHHHH-hCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhc
Confidence 34455554444444331 13468999999999999999999999999999998877532211100000 00000
Q ss_pred cc-----------CCCCCHHHHHHH-------------------HhcCcc-----cCCCCCCCCCCCCCCCCCeEEEEee
Q 004766 613 DF-----------GCSEEEEEFYWL-------------------IKYSPL-----HNVRRPWEQNPDKPFQYPSTLLLTA 657 (732)
Q Consensus 613 ~~-----------g~p~~~~~~~~~-------------------~~~sp~-----~~~~~~~~~~~~~~~~~~p~Li~~g 657 (732)
.+ .....+..+..+ .....+ .... .+..|+|+++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~P~l~i~g 216 (272)
T 3fsg_A 147 VENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNI----------NYQFPFKIMVG 216 (272)
T ss_dssp CTTGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTC----------CCSSCEEEEEE
T ss_pred ccCHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhc----------cCCCCEEEEEe
Confidence 00 000111111111 100000 0112 37899999999
Q ss_pred CCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 004766 658 DHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 658 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 727 (732)
.+|..||+..+.++.+.+. .+++++++++||...... ..+....+.+||.+...
T Consensus 217 ~~D~~~~~~~~~~~~~~~~--------------~~~~~~~~~~gH~~~~~~--~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 217 RNDQVVGYQEQLKLINHNE--------------NGEIVLLNRTGHNLMIDQ--REAVGFHFDLFLDELNS 270 (272)
T ss_dssp TTCTTTCSHHHHHHHTTCT--------------TEEEEEESSCCSSHHHHT--HHHHHHHHHHHHHHHHC
T ss_pred CCCCcCCHHHHHHHHHhcC--------------CCeEEEecCCCCCchhcC--HHHHHHHHHHHHHHhhc
Confidence 9999999998877765443 368899999999865422 23455678889887643
No 147
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.58 E-value=1.2e-14 Score=147.54 Aligned_cols=122 Identities=16% Similarity=0.156 Sum_probs=90.7
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| .++.+....+ +..|+||++||..+... .|.. +...|.++||.|+++|+||.|...... ...
T Consensus 11 ~~g-~~l~~~~~g~------~~~~~vv~~hG~~~~~~--~~~~-~~~~l~~~G~~v~~~d~~G~G~s~~~~------~~~ 74 (286)
T 3qit_A 11 FGG-NQICLCSWGS------PEHPVVLCIHGILEQGL--AWQE-VALPLAAQGYRVVAPDLFGHGRSSHLE------MVT 74 (286)
T ss_dssp ETT-EEEEEEEESC------TTSCEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEEECCTTSTTSCCCS------SGG
T ss_pred cCC-ceEEEeecCC------CCCCEEEEECCCCcccc--hHHH-HHHHhhhcCeEEEEECCCCCCCCCCCC------CCC
Confidence 478 8998877643 34689999999877643 3443 445566689999999999987643211 112
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccc
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDM 598 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~ 598 (732)
...++++.+.+..+++. .+.+++.++|+|+||++++.++.++|++++++|+..|....
T Consensus 75 ~~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 132 (286)
T 3qit_A 75 SYSSLTFLAQIDRVIQE--LPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPA 132 (286)
T ss_dssp GCSHHHHHHHHHHHHHH--SCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred CcCHHHHHHHHHHHHHh--cCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCC
Confidence 34566777776666655 24468999999999999999999999999999999887654
No 148
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.58 E-value=1.9e-14 Score=147.47 Aligned_cols=122 Identities=20% Similarity=0.147 Sum_probs=80.8
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| .++.+...-+ ....|.||++||+++.... |...+..++. +||.|+++|.||.|.....- ..
T Consensus 12 ~~g-~~l~~~~~g~-----~~~~~~vvllHG~~~~~~~--~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~-------~~ 75 (293)
T 1mtz_A 12 VNG-IYIYYKLCKA-----PEEKAKLMTMHGGPGMSHD--YLLSLRDMTK-EGITVLFYDQFGCGRSEEPD-------QS 75 (293)
T ss_dssp ETT-EEEEEEEECC-----SSCSEEEEEECCTTTCCSG--GGGGGGGGGG-GTEEEEEECCTTSTTSCCCC-------GG
T ss_pred ECC-EEEEEEEECC-----CCCCCeEEEEeCCCCcchh--HHHHHHHHHh-cCcEEEEecCCCCccCCCCC-------CC
Confidence 378 7876654422 1123789999998765432 2222334444 89999999999988643211 01
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccc
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 597 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d 597 (732)
..+++++.+.+..+++.- ...+++.++|+|+||.++..++.++|++++++|+..|...
T Consensus 76 ~~~~~~~~~dl~~~~~~l-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 133 (293)
T 1mtz_A 76 KFTIDYGVEEAEALRSKL-FGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSS 133 (293)
T ss_dssp GCSHHHHHHHHHHHHHHH-HTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB
T ss_pred cccHHHHHHHHHHHHHHh-cCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccC
Confidence 123455544444444331 0235899999999999999999999999999999888654
No 149
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.58 E-value=5.9e-14 Score=142.38 Aligned_cols=120 Identities=18% Similarity=0.162 Sum_probs=82.1
Q ss_pred EEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccc
Q 004766 456 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 535 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~ 535 (732)
+++.|| .++.+...-|+ ..|.||++||..+... .|... ...|.++||.|+++|+||.|.....
T Consensus 3 ~~~~~g-~~l~y~~~g~~------~~~~vvllHG~~~~~~--~w~~~-~~~l~~~g~~vi~~D~~G~G~S~~~------- 65 (275)
T 1a88_A 3 VTTSDG-TNIFYKDWGPR------DGLPVVFHHGWPLSAD--DWDNQ-MLFFLSHGYRVIAHDRRGHGRSDQP------- 65 (275)
T ss_dssp EECTTS-CEEEEEEESCT------TSCEEEEECCTTCCGG--GGHHH-HHHHHHTTCEEEEECCTTSTTSCCC-------
T ss_pred EEccCC-CEEEEEEcCCC------CCceEEEECCCCCchh--hHHHH-HHHHHHCCceEEEEcCCcCCCCCCC-------
Confidence 556789 88876554321 3478999999866542 34443 3455658999999999998865321
Q ss_pred cCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC-CCeeeEEEEcCCc
Q 004766 536 AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVGV 595 (732)
Q Consensus 536 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~~f~a~v~~~p~ 595 (732)
....+++++.+.+..+++. ...+++.++|||+||++++.++.++ |++++++|+..+.
T Consensus 66 -~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 123 (275)
T 1a88_A 66 -STGHDMDTYAADVAALTEA--LDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAV 123 (275)
T ss_dssp -SSCCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCC
T ss_pred -CCCCCHHHHHHHHHHHHHH--cCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCC
Confidence 1123455555444444433 2335899999999999998877776 9999999887754
No 150
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.58 E-value=5.5e-14 Score=140.90 Aligned_cols=224 Identities=13% Similarity=0.087 Sum_probs=128.5
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| .++.+...- ...|.||++||..+.. ...|.. ....|.++||.|+++|+||.|..... .....
T Consensus 9 ~~g-~~l~~~~~g-------~~~~~vvllHG~~~~~-~~~~~~-~~~~l~~~g~~vi~~D~~G~G~S~~~-----~~~~~ 73 (254)
T 2ocg_A 9 VNG-VQLHYQQTG-------EGDHAVLLLPGMLGSG-ETDFGP-QLKNLNKKLFTVVAWDPRGYGHSRPP-----DRDFP 73 (254)
T ss_dssp ETT-EEEEEEEEE-------CCSEEEEEECCTTCCH-HHHCHH-HHHHSCTTTEEEEEECCTTSTTCCSS-----CCCCC
T ss_pred ECC-EEEEEEEec-------CCCCeEEEECCCCCCC-ccchHH-HHHHHhhCCCeEEEECCCCCCCCCCC-----CCCCC
Confidence 378 887765432 1236899999976641 112443 34556658999999999998865321 01111
Q ss_pred ccHH-HHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccc-----cccCCCCCcccc
Q 004766 539 QNCF-DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR-----YHKFTIGHAWVS 612 (732)
Q Consensus 539 ~~~~-~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~-----~~~~~~~~~~~~ 612 (732)
...+ +|+.++++++.+.+ .+++.++|+|+||++++.++.++|++++++|+..|...... +........|..
T Consensus 74 ~~~~~~~~~~~~~~l~~l~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (254)
T 2ocg_A 74 ADFFERDAKDAVDLMKALK---FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSE 150 (254)
T ss_dssp TTHHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCH
T ss_pred hHHHHHHHHHHHHHHHHhC---CCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHH
Confidence 1113 33444455554443 36899999999999999999999999999998776432110 000000001110
Q ss_pred --------ccCCCCCH----HHHHHHHhcC--cc-cCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHH
Q 004766 613 --------DFGCSEEE----EEFYWLIKYS--PL-HNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQY 677 (732)
Q Consensus 613 --------~~g~p~~~----~~~~~~~~~s--p~-~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~ 677 (732)
.++..... ...+.+.... +- ..... ....+..|+|+++|++|..||+..+.++.+.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 224 (254)
T 2ocg_A 151 RTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRH------LLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKG 224 (254)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGG------GGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTT
T ss_pred HhHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhh------hhhcccCCEEEEecCCCccCCHHHHHHHHHhCCC
Confidence 01110000 0011111110 00 00000 0113789999999999999999888777665442
Q ss_pred hhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHH
Q 004766 678 VLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 722 (732)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 722 (732)
.++.+++++||....... ....+.+.+||
T Consensus 225 --------------~~~~~~~~~gH~~~~e~p--~~~~~~i~~fl 253 (254)
T 2ocg_A 225 --------------SRLHLMPEGKHNLHLRFA--DEFNKLAEDFL 253 (254)
T ss_dssp --------------CEEEEETTCCTTHHHHTH--HHHHHHHHHHH
T ss_pred --------------CEEEEcCCCCCchhhhCH--HHHHHHHHHHh
Confidence 478889999998653222 24445566776
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.58 E-value=9.4e-14 Score=157.34 Aligned_cols=240 Identities=8% Similarity=-0.095 Sum_probs=156.3
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
+..+++||||++|||+.+.+| ++.||++++|+....+... .....++|||| +++|++....
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g----~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~------------ 85 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEG----SVNAYLYDGGETVKLNREPINSVLDPHYGVG--RVILVRDVSK------------ 85 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETT----EEEEEEEETTEEEECCSSCCSEECEECTTCS--EEEEEEECST------------
T ss_pred hheeecCCCCCeEEEEEccCC----ceeEEEEcCCCcEeeecccccccccccCCCC--eEEEEeccCC------------
Confidence 568889999999999987655 3455556788765444332 23478999999 5777664310
Q ss_pred cCCcccEEEEEEC--CCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 213 DSNLYHEFYYHFL--GTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 213 ~~~~~~~v~~~~l--gt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
.....+||.+++ .+.. ..+. . .... ...+|||||+.+++.+.... ... ++|++++.
T Consensus 86 -g~~~~~l~~~~~~~~g~~---~~l~-~--~~~~-~~~~~s~dg~~~~~~s~~~~--~~~--l~d~~~g~---------- 143 (582)
T 3o4h_A 86 -GAEQHALFKVNTSRPGEE---QRLE-A--VKPM-RILSGVDTGEAVVFTGATED--RVA--LYALDGGG---------- 143 (582)
T ss_dssp -TSCCEEEEEEETTSTTCC---EECT-T--SCSB-EEEEEEECSSCEEEEEECSS--CEE--EEEEETTE----------
T ss_pred -CCcceEEEEEeccCCCcc---cccc-C--CCCc-eeeeeCCCCCeEEEEecCCC--Cce--EEEccCCc----------
Confidence 123346888887 4322 1221 1 1122 25689999999888765443 233 55777642
Q ss_pred CCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecC
Q 004766 291 GLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSD 370 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~ 370 (732)
.+.++.... ....|||||+.|++.+++.+....|+++|+++++ .+.|..+. ..+..+.|++|++.++....+
T Consensus 144 ----~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~-~~~l~~~~--~~~~~~~~SpDG~~l~~~~~~ 215 (582)
T 3o4h_A 144 ----LRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG-LRVFDSGE--GSFSSASISPGMKVTAGLETA 215 (582)
T ss_dssp ----EEEEEEESS-CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC-CEEECCSS--CEEEEEEECTTSCEEEEEECS
T ss_pred ----EEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC-ceEeecCC--CccccceECCCCCEEEEccCC
Confidence 334444332 3345999999999887765444679999998887 56676554 456889999877666677777
Q ss_pred CeeEEEEEeCCCCceeeecccccceeeEee--------cccCCcEEEEEEecCCCCceEEEEEC
Q 004766 371 VKYVLQIRDLKNGSLLHQLPIEIGSVNAIS--------ARREDSVVFISFTSFLIPGIVYQCNL 426 (732)
Q Consensus 371 g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~--------~s~d~~~l~~~~ss~~~p~~~y~~d~ 426 (732)
+..+|++||+++|+. +.++...+.+..+. +++|| .++++.+.. .++..|++
T Consensus 216 ~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~---g~~~l~~~ 274 (582)
T 3o4h_A 216 REARLVTVDPRDGSV-EDLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARRE---GRSAVFID 274 (582)
T ss_dssp SCEEEEEECTTTCCE-EECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEET---TEEEEEET
T ss_pred CeeEEEEEcCCCCcE-EEccCCCcChhhhhhccccceeEcCCC-cEEEEEEcC---CcEEEEEE
Confidence 777999999997776 34433344444455 88999 677666543 35666666
No 152
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.58 E-value=4.8e-16 Score=170.31 Aligned_cols=218 Identities=14% Similarity=0.107 Sum_probs=141.4
Q ss_pred eEEEEEEEcCCCCCCCCccEEEEEcCCCC---ccCCCCcChhHHHHHHhcCcEEEEEcccC-CCCCchhHHhcccccCCc
Q 004766 464 KIPMFIVSKKNIKLDGSHPCLLYGYGGFN---ISVTPSFSVSRTILMRHLGAVFCIANIRG-GGEYGEEWHKGGALAKKQ 539 (732)
Q Consensus 464 ~i~~~~~~p~~~~~~~~~P~vv~~hG~~~---~~~~~~~~~~~~~~l~~~G~~v~~~~~rG-~g~~g~~~~~~~~~~~~~ 539 (732)
-+.+.++.|+.. .++.|+||++|||.. ......+.. ..++.+.|++|+.+|||. ..+|+..-... ....+.
T Consensus 82 cL~l~v~~P~~~--~~~~PviV~iHGGg~~~g~~~~~~~~~--~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~-~~~~~n 156 (489)
T 1qe3_A 82 CLYVNVFAPDTP--SQNLPVMVWIHGGAFYLGAGSEPLYDG--SKLAAQGEVIVVTLNYRLGPFGFLHLSSFD-EAYSDN 156 (489)
T ss_dssp CCEEEEEEECSS--CCSEEEEEEECCSTTTSCCTTSGGGCC--HHHHHHHTCEEEEECCCCHHHHSCCCTTTC-TTSCSC
T ss_pred CCEEEEEeCCCC--CCCCCEEEEECCCccccCCCCCcccCH--HHHHhcCCEEEEecCccCcccccCcccccc-ccCCCC
Confidence 356677788752 245899999999853 222222332 344553359999999993 32333210000 012334
Q ss_pred cHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhhC--CCeeeEEEEcCCcccccccccCC-CCCccccc
Q 004766 540 NCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQR--PDLFGCALAHVGVMDMLRYHKFT-IGHAWVSD 613 (732)
Q Consensus 540 ~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~--p~~f~a~v~~~p~~d~~~~~~~~-~~~~~~~~ 613 (732)
..+.|+.++++|+.++. ..||+||.|+|+|+||++++.++... +++|+++|+.+|..++....... ....+...
T Consensus 157 ~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~~~~~ 236 (489)
T 1qe3_A 157 LGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAASTAAAFLQV 236 (489)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 46899999999998762 35999999999999999999888753 57999999999987443221100 00011123
Q ss_pred cCCCC-CHH------HHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCC
Q 004766 614 FGCSE-EEE------EFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENS 686 (732)
Q Consensus 614 ~g~p~-~~~------~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 686 (732)
.|++. ..+ .-+.+...+++.+... ..+|.+++++..|.+|.+.++.++.++++..
T Consensus 237 ~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~----------~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~-------- 298 (489)
T 1qe3_A 237 LGINESQLDRLHTVAAEDLLKAADQLRIAEK----------ENIFQLFFQPALDPKTLPEEPEKSIAEGAAS-------- 298 (489)
T ss_dssp HTCCTTCGGGGGTSCHHHHHHHHHHHHTSTT----------CCTTSCSSCCBCBTTTBCSCHHHHHHTTTTT--------
T ss_pred cCCCHHHHHHHHcCCHHHHHHHHHHhhhccc----------cccCCccceEeECCeecCcCHHHHHhcCCCC--------
Confidence 45442 110 1112333334332212 3456788999999999999999998887765
Q ss_pred CCCCCEEEEEeCCCCCCCCC
Q 004766 687 PQTNPIIGRIERKAGHGVGL 706 (732)
Q Consensus 687 ~~~~~~~~~~~~~~gH~~~~ 706 (732)
++|+.+-.++++||.+..
T Consensus 299 --~vp~~~g~~~~Eg~~~~~ 316 (489)
T 1qe3_A 299 --GIPLLIGTTRDEGYLFFT 316 (489)
T ss_dssp --TCCEEEEEETTGGGGTCC
T ss_pred --CCCEEEeeecchhHhhcc
Confidence 899999999999998764
No 153
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.58 E-value=9.5e-15 Score=149.54 Aligned_cols=207 Identities=13% Similarity=0.089 Sum_probs=126.0
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
++.|+||++||..+... .|.......+.++||.|+++|+||.|... .....+++++.+.+..+++. .
T Consensus 41 g~~~~vv~lHG~~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~s~---------~~~~~~~~~~~~~~~~~l~~--l 107 (293)
T 3hss_A 41 GTGDPVVFIAGRGGAGR--TWHPHQVPAFLAAGYRCITFDNRGIGATE---------NAEGFTTQTMVADTAALIET--L 107 (293)
T ss_dssp CSSEEEEEECCTTCCGG--GGTTTTHHHHHHTTEEEEEECCTTSGGGT---------TCCSCCHHHHHHHHHHHHHH--H
T ss_pred CCCCEEEEECCCCCchh--hcchhhhhhHhhcCCeEEEEccCCCCCCC---------CcccCCHHHHHHHHHHHHHh--c
Confidence 45689999999877653 34422233343499999999999986321 11123455665555555543 2
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc-------------CCCCCccc------cccCCC--
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK-------------FTIGHAWV------SDFGCS-- 617 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~-------------~~~~~~~~------~~~g~p-- 617 (732)
+.+++.++|+|+||.++..++.++|++++++|+..|......... ......+. ..+...
T Consensus 108 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (293)
T 3hss_A 108 DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTL 187 (293)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHH
T ss_pred CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhcccccc
Confidence 346899999999999999999999999999999988654321100 00000000 000000
Q ss_pred CCHH---HH---------------HHHHhc----CcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHH
Q 004766 618 EEEE---EF---------------YWLIKY----SPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATM 675 (732)
Q Consensus 618 ~~~~---~~---------------~~~~~~----sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l 675 (732)
.+.. .+ ...... +....+. .+.+|+|+++|.+|..+|+..+.++.+.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~i~~P~lii~g~~D~~~~~~~~~~~~~~~ 257 (293)
T 3hss_A 188 NDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYR----------NIAAPVLVIGFADDVVTPPYLGREVADAL 257 (293)
T ss_dssp TCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHT----------TCCSCEEEEEETTCSSSCHHHHHHHHHHS
T ss_pred cccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHh----------hCCCCEEEEEeCCCCCCCHHHHHHHHHHC
Confidence 0000 00 000000 0011112 37889999999999999998888777665
Q ss_pred HHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 676 QYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
. .+.+.+++++||....... .+....+.+||.+
T Consensus 258 ~--------------~~~~~~~~~~gH~~~~~~p--~~~~~~i~~fl~~ 290 (293)
T 3hss_A 258 P--------------NGRYLQIPDAGHLGFFERP--EAVNTAMLKFFAS 290 (293)
T ss_dssp T--------------TEEEEEETTCCTTHHHHSH--HHHHHHHHHHHHT
T ss_pred C--------------CceEEEeCCCcchHhhhCH--HHHHHHHHHHHHh
Confidence 4 2588999999998643222 2445567777764
No 154
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.58 E-value=6.2e-14 Score=142.40 Aligned_cols=120 Identities=17% Similarity=0.160 Sum_probs=82.6
Q ss_pred EEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccc
Q 004766 456 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 535 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~ 535 (732)
+++.|| .+|.+...-|+ ..|.||++||..+... .|... ...|.++||.|+++|.||.|.....
T Consensus 4 ~~~~~g-~~l~y~~~g~~------~~~~vvllHG~~~~~~--~w~~~-~~~L~~~g~~vi~~D~~G~G~S~~~------- 66 (276)
T 1zoi_A 4 VTTKDG-VQIFYKDWGPR------DAPVIHFHHGWPLSAD--DWDAQ-LLFFLAHGYRVVAHDRRGHGRSSQV------- 66 (276)
T ss_dssp EECTTS-CEEEEEEESCT------TSCEEEEECCTTCCGG--GGHHH-HHHHHHTTCEEEEECCTTSTTSCCC-------
T ss_pred EECCCC-cEEEEEecCCC------CCCeEEEECCCCcchh--HHHHH-HHHHHhCCCEEEEecCCCCCCCCCC-------
Confidence 456789 88876654321 3478999999876542 45443 3456658999999999998865321
Q ss_pred cCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC-CCeeeEEEEcCCc
Q 004766 536 AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVGV 595 (732)
Q Consensus 536 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~~f~a~v~~~p~ 595 (732)
....+++++.+.+..+++. .+.+++.++|+|+||.+++.++.++ |++++++|+..+.
T Consensus 67 -~~~~~~~~~~~d~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 124 (276)
T 1zoi_A 67 -WDGHDMDHYADDVAAVVAH--LGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAV 124 (276)
T ss_dssp -SSCCSHHHHHHHHHHHHHH--HTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCC
T ss_pred -CCCCCHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCC
Confidence 1123455555444444433 2345899999999999999877776 9999999887753
No 155
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.57 E-value=5.1e-15 Score=150.10 Aligned_cols=209 Identities=11% Similarity=0.064 Sum_probs=132.9
Q ss_pred cEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCC
Q 004766 482 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSR 561 (732)
Q Consensus 482 P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 561 (732)
|+||++||..+... .|.. +...|. +||.|+++|+||.|........ .....+++++.+.+..+++. .+.+
T Consensus 29 ~~vv~lHG~~~~~~--~~~~-~~~~l~-~g~~v~~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~ 98 (282)
T 3qvm_A 29 KTVLLAHGFGCDQN--MWRF-MLPELE-KQFTVIVFDYVGSGQSDLESFS----TKRYSSLEGYAKDVEEILVA--LDLV 98 (282)
T ss_dssp CEEEEECCTTCCGG--GGTT-THHHHH-TTSEEEECCCTTSTTSCGGGCC----TTGGGSHHHHHHHHHHHHHH--TTCC
T ss_pred CeEEEECCCCCCcc--hHHH-HHHHHh-cCceEEEEecCCCCCCCCCCCC----ccccccHHHHHHHHHHHHHH--cCCC
Confidence 89999999876643 3433 356678 5999999999998865432210 01223566666666666554 2347
Q ss_pred cEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc-CC--C---------------CCcccc-----ccCCCC
Q 004766 562 KLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK-FT--I---------------GHAWVS-----DFGCSE 618 (732)
Q Consensus 562 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~-~~--~---------------~~~~~~-----~~g~p~ 618 (732)
++.++|+|+||.++..++.++|++++++|+..|......... +. . ...|.. .++.+.
T Consensus 99 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T 3qvm_A 99 NVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASH 178 (282)
T ss_dssp SEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTS
T ss_pred ceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCcc
Confidence 899999999999999999999999999999988764332110 00 0 000000 011122
Q ss_pred CHHHHHHH-------------------HhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhh
Q 004766 619 EEEEFYWL-------------------IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVL 679 (732)
Q Consensus 619 ~~~~~~~~-------------------~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~ 679 (732)
.+...+.+ ...+....+. .+..|+|+++|.+|..||+..+.++.+.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--- 245 (282)
T 3qvm_A 179 SSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLE----------DISTPALIFQSAKDSLASPEVGQYMAENIP--- 245 (282)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGG----------GCCSCEEEEEEEECTTCCHHHHHHHHHHSS---
T ss_pred chhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHh----------cCCCCeEEEEeCCCCcCCHHHHHHHHHhCC---
Confidence 22111111 1111112222 378999999999999999988887766553
Q ss_pred cCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 680 CTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
..++++++++||...... ..+....+.+||.++.
T Consensus 246 -----------~~~~~~~~~~gH~~~~~~--~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 246 -----------NSQLELIQAEGHCLHMTD--AGLITPLLIHFIQNNQ 279 (282)
T ss_dssp -----------SEEEEEEEEESSCHHHHC--HHHHHHHHHHHHHHC-
T ss_pred -----------CCcEEEecCCCCcccccC--HHHHHHHHHHHHHhcC
Confidence 258899999999864322 2345667888887753
No 156
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.57 E-value=1.2e-14 Score=146.55 Aligned_cols=219 Identities=12% Similarity=0.072 Sum_probs=130.0
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
...|+||++||..+... .|.. ....|.++||.|+++|+||.|...... ....+++++.+.+..+++.- .
T Consensus 10 ~~~~~vvllHG~~~~~~--~~~~-~~~~l~~~g~~v~~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~l~~l-~ 78 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAW--CWYK-IVALMRSSGHNVTALDLGASGINPKQA-------LQIPNFSDYLSPLMEFMASL-P 78 (267)
T ss_dssp CCCCEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEEECCTTSTTCSCCG-------GGCCSHHHHHHHHHHHHHTS-C
T ss_pred CCCCeEEEECCCCCCcc--hHHH-HHHHHHhcCCeEEEeccccCCCCCCcC-------CccCCHHHHHHHHHHHHHhc-C
Confidence 46799999999886643 3443 445566589999999999988653321 11245666666666666542 1
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc------cC-CCCCccc--------------------
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH------KF-TIGHAWV-------------------- 611 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~------~~-~~~~~~~-------------------- 611 (732)
+.+++.++|+|+||+++..++.++|++++++|+..|........ .. .....|.
T Consensus 79 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (267)
T 3sty_A 79 ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAG 158 (267)
T ss_dssp TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECC
T ss_pred CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhh
Confidence 45799999999999999999999999999999877754221100 00 0000010
Q ss_pred -----cccCCCCCHHHHHHHHh-cCcccCCC--CC--CCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcC
Q 004766 612 -----SDFGCSEEEEEFYWLIK-YSPLHNVR--RP--WEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCT 681 (732)
Q Consensus 612 -----~~~g~p~~~~~~~~~~~-~sp~~~~~--~~--~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~ 681 (732)
..+.....++....+.. ..+..... .. ............|+|+++|.+|..+|+....++.+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----- 233 (267)
T 3sty_A 159 PKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNP----- 233 (267)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSC-----
T ss_pred HHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhCC-----
Confidence 00111111222211111 11110000 00 00000000135799999999999999888777766543
Q ss_pred CCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 682 SLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
+ ..+++++++||....... .+....+.+|+.+
T Consensus 234 -------~--~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 265 (267)
T 3sty_A 234 -------P--DEVKEIEGSDHVTMMSKP--QQLFTTLLSIANK 265 (267)
T ss_dssp -------C--SEEEECTTCCSCHHHHSH--HHHHHHHHHHHHH
T ss_pred -------C--ceEEEeCCCCccccccCh--HHHHHHHHHHHHh
Confidence 2 488999999998643322 2455567778765
No 157
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.57 E-value=4.2e-14 Score=144.66 Aligned_cols=230 Identities=13% Similarity=0.021 Sum_probs=136.3
Q ss_pred EEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccc
Q 004766 455 FVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGA 534 (732)
Q Consensus 455 ~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~ 534 (732)
.+.+.+| .++.+...-|+ ..|.||++||..+.... .|.. ....|+ +||.|+++|.||.|..... .
T Consensus 6 ~~~~~~g-~~l~~~~~G~~------~~~~vvllHG~~~~~~~-~w~~-~~~~L~-~~~~vi~~Dl~G~G~S~~~-----~ 70 (286)
T 2yys_A 6 GYVPVGE-AELYVEDVGPV------EGPALFVLHGGPGGNAY-VLRE-GLQDYL-EGFRVVYFDQRGSGRSLEL-----P 70 (286)
T ss_dssp EEEECSS-CEEEEEEESCT------TSCEEEEECCTTTCCSH-HHHH-HHGGGC-TTSEEEEECCTTSTTSCCC-----C
T ss_pred eEEeECC-EEEEEEeecCC------CCCEEEEECCCCCcchh-HHHH-HHHHhc-CCCEEEEECCCCCCCCCCC-----c
Confidence 4445688 88877655331 35789999998876420 3443 334566 7999999999998864320 0
Q ss_pred ccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccc---cc--c---CCC
Q 004766 535 LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR---YH--K---FTI 606 (732)
Q Consensus 535 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~---~~--~---~~~ 606 (732)
......+++++.+.+..+++. ...+++.++|||+||.+++.++.++|+ ++++|+..|..+... .. . ...
T Consensus 71 ~~~~~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 147 (286)
T 2yys_A 71 QDPRLFTVDALVEDTLLLAEA--LGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPL 147 (286)
T ss_dssp SCGGGCCHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCC
T ss_pred cCcccCcHHHHHHHHHHHHHH--hCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccc
Confidence 000023566666666655554 234689999999999999999999999 999998887642211 00 0 000
Q ss_pred --------------C-Cccccc--cCCCC---CHHHHHHHH------------hcCcccCCCCCCCCCCCCCCCCCeEEE
Q 004766 607 --------------G-HAWVSD--FGCSE---EEEEFYWLI------------KYSPLHNVRRPWEQNPDKPFQYPSTLL 654 (732)
Q Consensus 607 --------------~-~~~~~~--~g~p~---~~~~~~~~~------------~~sp~~~~~~~~~~~~~~~~~~~p~Li 654 (732)
. ..+... +..+. ..+..+... .+........ .+....+..|+||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~i~~P~lv 223 (286)
T 2yys_A 148 PDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDY----TPYLTPERRPLYV 223 (286)
T ss_dssp SCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBC----GGGCCCCSSCEEE
T ss_pred hhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCCh----hhhhhhcCCCEEE
Confidence 0 000000 00000 000000000 0000000000 0011137899999
Q ss_pred EeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 655 LTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 655 ~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
++|++|..+|+. +.++.+ +... ++.+++++||....... .+..+.+.+||.+
T Consensus 224 i~G~~D~~~~~~-~~~~~~-~~~~--------------~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 275 (286)
T 2yys_A 224 LVGERDGTSYPY-AEEVAS-RLRA--------------PIRVLPEAGHYLWIDAP--EAFEEAFKEALAA 275 (286)
T ss_dssp EEETTCTTTTTT-HHHHHH-HHTC--------------CEEEETTCCSSHHHHCH--HHHHHHHHHHHHT
T ss_pred EEeCCCCcCCHh-HHHHHh-CCCC--------------CEEEeCCCCCCcChhhH--HHHHHHHHHHHHh
Confidence 999999999999 888887 6532 67889999998643322 3455677888875
No 158
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.57 E-value=1.9e-14 Score=143.86 Aligned_cols=208 Identities=17% Similarity=0.183 Sum_probs=124.1
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccH-HHHHHHHHHHHHHcCCCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNC-FDDFISASEYLISAGYTQ 559 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~-~~D~~~~~~~l~~~~~~d 559 (732)
.|.||++||..+... .|.. ....|.++||.|+++|+||.|...... ....... .+|+.+++++|.+.++
T Consensus 16 ~~~vvllHG~~~~~~--~~~~-~~~~L~~~g~~vi~~D~~GhG~s~~~~-----~~~~~~~~~~d~~~~~~~l~~~~~-- 85 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSA--DVRM-LGRFLESKGYTCHAPIYKGHGVPPEEL-----VHTGPDDWWQDVMNGYEFLKNKGY-- 85 (247)
T ss_dssp SCEEEEECCTTCCTH--HHHH-HHHHHHHTTCEEEECCCTTSSSCHHHH-----TTCCHHHHHHHHHHHHHHHHHHTC--
T ss_pred CcEEEEECCCCCChH--HHHH-HHHHHHHCCCEEEecccCCCCCCHHHh-----cCCCHHHHHHHHHHHHHHHHHcCC--
Confidence 478999999776542 3333 345566589999999999988532211 0111112 3556666777766554
Q ss_pred CCcEEEEecChhHHHHHHHHhhCCCeeeEEEE-cCCcccc-ccccc--CC-CCCccccccCCC----------------C
Q 004766 560 SRKLCIEGGSNGGLLVGACINQRPDLFGCALA-HVGVMDM-LRYHK--FT-IGHAWVSDFGCS----------------E 618 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~-~~p~~d~-~~~~~--~~-~~~~~~~~~g~p----------------~ 618 (732)
+++.++|+||||.+++.++.++| ++++|+ ..|.... ..... +. ....+....+.. .
T Consensus 86 -~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (247)
T 1tqh_A 86 -EKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMK 162 (247)
T ss_dssp -CCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCT
T ss_pred -CeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhhhhcccCCCHH
Confidence 58999999999999999999999 677764 3443210 00000 00 000000000000 0
Q ss_pred CHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeC
Q 004766 619 EEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIER 698 (732)
Q Consensus 619 ~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 698 (732)
.-..+..+. .+....+.+ +..|+||++|.+|..||+..+.++++.+. +...++++++
T Consensus 163 ~~~~~~~~~-~~~~~~l~~----------i~~P~Lii~G~~D~~~p~~~~~~~~~~~~------------~~~~~~~~~~ 219 (247)
T 1tqh_A 163 TLKALQELI-ADVRDHLDL----------IYAPTFVVQARHDEMINPDSANIIYNEIE------------SPVKQIKWYE 219 (247)
T ss_dssp THHHHHHHH-HHHHHTGGG----------CCSCEEEEEETTCSSSCTTHHHHHHHHCC------------CSSEEEEEET
T ss_pred HHHHHHHHH-HHHHhhccc----------CCCCEEEEecCCCCCCCcchHHHHHHhcC------------CCceEEEEeC
Confidence 000000000 011122333 78899999999999999999888876654 3347999999
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHH
Q 004766 699 KAGHGVGLPTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 699 ~~gH~~~~~~~~~~~~~~~~~~fl~~~ 725 (732)
++||....... ..+..+.+.+||.+.
T Consensus 220 ~~gH~~~~e~~-~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 220 QSGHVITLDQE-KDQLHEDIYAFLESL 245 (247)
T ss_dssp TCCSSGGGSTT-HHHHHHHHHHHHHHS
T ss_pred CCceeeccCcc-HHHHHHHHHHHHHhc
Confidence 99998754322 124556788898753
No 159
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.57 E-value=3.4e-14 Score=143.67 Aligned_cols=224 Identities=12% Similarity=0.014 Sum_probs=133.7
Q ss_pred EEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccc
Q 004766 455 FVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGA 534 (732)
Q Consensus 455 ~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~ 534 (732)
.+.+.|| .+|.+...-+ +..|+||++||...... .|... ...|+ ++|.|+++|.||.|....
T Consensus 8 ~~~~~~g-~~l~y~~~G~------~~~p~lvl~hG~~~~~~--~w~~~-~~~L~-~~~~vi~~D~rG~G~S~~------- 69 (266)
T 3om8_A 8 FLATSDG-ASLAYRLDGA------AEKPLLALSNSIGTTLH--MWDAQ-LPALT-RHFRVLRYDARGHGASSV------- 69 (266)
T ss_dssp EEECTTS-CEEEEEEESC------TTSCEEEEECCTTCCGG--GGGGG-HHHHH-TTCEEEEECCTTSTTSCC-------
T ss_pred EEeccCC-cEEEEEecCC------CCCCEEEEeCCCccCHH--HHHHH-HHHhh-cCcEEEEEcCCCCCCCCC-------
Confidence 3566799 8988765532 24689999999766532 35443 45677 689999999999886532
Q ss_pred ccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccc---------ccC-
Q 004766 535 LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY---------HKF- 604 (732)
Q Consensus 535 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~---------~~~- 604 (732)
.....+++++.+.+..+++. ...+++.++|+|+||.+++.++.++|++++++|+..+..-.... ...
T Consensus 70 -~~~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 146 (266)
T 3om8_A 70 -PPGPYTLARLGEDVLELLDA--LEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQA 146 (266)
T ss_dssp -CCSCCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHC
T ss_pred -CCCCCCHHHHHHHHHHHHHH--hCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHcc
Confidence 11224566666655555544 23358999999999999999999999999999986543211000 000
Q ss_pred CCCCc----cccccCCC----CCHHHHHHH----HhcCc---------c--cCCCCCCCCCCCCCCCCCeEEEEeeCCCC
Q 004766 605 TIGHA----WVSDFGCS----EEEEEFYWL----IKYSP---------L--HNVRRPWEQNPDKPFQYPSTLLLTADHDD 661 (732)
Q Consensus 605 ~~~~~----~~~~~g~p----~~~~~~~~~----~~~sp---------~--~~~~~~~~~~~~~~~~~~p~Li~~g~~D~ 661 (732)
..... ....|-.+ .+++..+.+ ....+ + ..... ....+..|+||++|++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~------~l~~i~~P~Lvi~G~~D~ 220 (266)
T 3om8_A 147 EDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRA------QLARIERPTLVIAGAYDT 220 (266)
T ss_dssp SSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTT------TGGGCCSCEEEEEETTCS
T ss_pred ccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhh------HhcCCCCCEEEEEeCCCC
Confidence 00000 00000000 011111111 11111 0 00111 111478999999999999
Q ss_pred CCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHH
Q 004766 662 RVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 722 (732)
Q Consensus 662 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 722 (732)
.+|+.++..+++.+.. .++++++ +||....... .+..+.+.+||
T Consensus 221 ~~~~~~~~~l~~~ip~--------------a~~~~i~-~gH~~~~e~p--~~~~~~i~~Fl 264 (266)
T 3om8_A 221 VTAASHGELIAASIAG--------------ARLVTLP-AVHLSNVEFP--QAFEGAVLSFL 264 (266)
T ss_dssp SSCHHHHHHHHHHSTT--------------CEEEEES-CCSCHHHHCH--HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCC--------------CEEEEeC-CCCCccccCH--HHHHHHHHHHh
Confidence 9999998888776653 3667776 7997643222 23445566776
No 160
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.56 E-value=1.1e-14 Score=145.07 Aligned_cols=208 Identities=14% Similarity=0.031 Sum_probs=125.3
Q ss_pred CCccEEEEEcCCCCccCCCC-cChhHHHHHHhcCcEEEEEcccCCCC--------------------CchhHHhcccccC
Q 004766 479 GSHPCLLYGYGGFNISVTPS-FSVSRTILMRHLGAVFCIANIRGGGE--------------------YGEEWHKGGALAK 537 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~rG~g~--------------------~g~~~~~~~~~~~ 537 (732)
.+.|+||++||..++..... ....+...|.++||.|+.+|.|+... ....|....
T Consensus 3 ~~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~---- 78 (243)
T 1ycd_A 3 VQIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHS---- 78 (243)
T ss_dssp CCCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCC----
T ss_pred CcCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCC----
Confidence 35689999999866532111 11134455664699999999993211 112332210
Q ss_pred CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCC------CeeeEEEEcCCcccccccccCCCCCccc
Q 004766 538 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRP------DLFGCALAHVGVMDMLRYHKFTIGHAWV 611 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p------~~f~a~v~~~p~~d~~~~~~~~~~~~~~ 611 (732)
......|+.+++++|.+.-..+..+++|+|+|+||++++.++.+++ ..+++++..+++.......... +.
T Consensus 79 ~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~-~~--- 154 (243)
T 1ycd_A 79 EISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDPEHP-GE--- 154 (243)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECTTST-TC---
T ss_pred CCcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcccccc-cc---
Confidence 1123456666667666542234468999999999999999988643 2467777766654321110000 00
Q ss_pred cccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCC--
Q 004766 612 SDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT-- 689 (732)
Q Consensus 612 ~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~-- 689 (732)
..+.. .+ . ..+..+.. +.+|+|++||.+|..||+.++.++++.+... +
T Consensus 155 ~~~~~-----~~---~--~~~~~~~~----------~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~----------~g~ 204 (243)
T 1ycd_A 155 LRITE-----KF---R--DSFAVKPD----------MKTKMIFIYGASDQAVPSVRSKYLYDIYLKA----------QNG 204 (243)
T ss_dssp EEECG-----GG---T--TTTCCCTT----------CCCEEEEEEETTCSSSCHHHHHHHHHHHHHH----------TTT
T ss_pred cccch-----hH---H--HhccCccc----------CCCCEEEEEeCCCCccCHHHHHHHHHHhhhh----------ccc
Confidence 00000 00 0 11222222 6789999999999999999999999998763 2
Q ss_pred -CCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 690 -NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 690 -~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
......+++++||.+.... .....+.+||.+++..
T Consensus 205 ~~~~~~~~~~~~gH~~~~~~----~~~~~i~~fl~~~~~~ 240 (243)
T 1ycd_A 205 NKEKVLAYEHPGGHMVPNKK----DIIRPIVEQITSSLQE 240 (243)
T ss_dssp CTTTEEEEEESSSSSCCCCH----HHHHHHHHHHHHHHC-
T ss_pred cccccEEEecCCCCcCCchH----HHHHHHHHHHHHhhhh
Confidence 1123345567899876532 3667788999988764
No 161
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.56 E-value=1.1e-13 Score=142.28 Aligned_cols=122 Identities=12% Similarity=0.068 Sum_probs=86.3
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.|| .++.+...-+ ...|.||++||..+.. ..|...+...|+++||.|+++|.||.|..... . ....
T Consensus 8 ~~g-~~l~y~~~G~------~~~~~vvllHG~~~~~--~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~--~---~~~~ 73 (298)
T 1q0r_A 8 SGD-VELWSDDFGD------PADPALLLVMGGNLSA--LGWPDEFARRLADGGLHVIRYDHRDTGRSTTR--D---FAAH 73 (298)
T ss_dssp ETT-EEEEEEEESC------TTSCEEEEECCTTCCG--GGSCHHHHHHHHTTTCEEEEECCTTSTTSCCC--C---TTTS
T ss_pred cCC-eEEEEEeccC------CCCCeEEEEcCCCCCc--cchHHHHHHHHHhCCCEEEeeCCCCCCCCCCC--C---CCcC
Confidence 588 8887665432 2357899999987654 34555454566768999999999998865320 0 0112
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
..+++++.+.+..+++. ...+++.++|+|+||.+++.++.++|++++++|+..+..
T Consensus 74 ~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (298)
T 1q0r_A 74 PYGFGELAADAVAVLDG--WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGG 129 (298)
T ss_dssp CCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CcCHHHHHHHHHHHHHH--hCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccC
Confidence 24566666655555554 234689999999999999999999999999998876543
No 162
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.56 E-value=2.1e-14 Score=146.53 Aligned_cols=220 Identities=13% Similarity=0.023 Sum_probs=132.3
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC-CCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 537 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 537 (732)
.+| .++.+... |..|.||++||....... ..|.... ..|+ +||.|+++|.||.|..... ..
T Consensus 12 ~~g-~~l~y~~~--------G~g~~vvllHG~~~~~~~~~~w~~~~-~~L~-~~~~vi~~Dl~G~G~S~~~-------~~ 73 (282)
T 1iup_A 12 AAG-VLTNYHDV--------GEGQPVILIHGSGPGVSAYANWRLTI-PALS-KFYRVIAPDMVGFGFTDRP-------EN 73 (282)
T ss_dssp ETT-EEEEEEEE--------CCSSEEEEECCCCTTCCHHHHHTTTH-HHHT-TTSEEEEECCTTSTTSCCC-------TT
T ss_pred ECC-EEEEEEec--------CCCCeEEEECCCCCCccHHHHHHHHH-Hhhc-cCCEEEEECCCCCCCCCCC-------CC
Confidence 378 78766543 234689999996432211 1344333 4466 8999999999998864321 11
Q ss_pred CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccc-------ccCCCCC--
Q 004766 538 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY-------HKFTIGH-- 608 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~-------~~~~~~~-- 608 (732)
...+++++.+.+..+++. ...+++.++|+|+||.+++.++.++|++++++|+..|....... .......
T Consensus 74 ~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (282)
T 1iup_A 74 YNYSKDSWVDHIIGIMDA--LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIEN 151 (282)
T ss_dssp CCCCHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHH
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcCCCcHHH
Confidence 123566666666655554 23468999999999999999999999999999988765321100 0000000
Q ss_pred --ccccc-cCCC--CCHHHH-------------HHHHhcC--c-------c----cCCCCCCCCCCCCCCCCCeEEEEee
Q 004766 609 --AWVSD-FGCS--EEEEEF-------------YWLIKYS--P-------L----HNVRRPWEQNPDKPFQYPSTLLLTA 657 (732)
Q Consensus 609 --~~~~~-~g~p--~~~~~~-------------~~~~~~s--p-------~----~~~~~~~~~~~~~~~~~~p~Li~~g 657 (732)
.+... +.++ ..++.. ..+.... + + ..+. .+..|+|+++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~i~~P~lii~G 221 (282)
T 1iup_A 152 MRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIK----------TLPNETLIIHG 221 (282)
T ss_dssp HHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHT----------TCCSCEEEEEE
T ss_pred HHHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhh----------hcCCCEEEEec
Confidence 00000 0000 011110 0011100 0 0 1112 37899999999
Q ss_pred CCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 658 DHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 658 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
++|..+|+..+.++++.+.. .++++++++||....... .+..+.+.+||.+
T Consensus 222 ~~D~~~p~~~~~~~~~~~~~--------------~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 272 (282)
T 1iup_A 222 REDQVVPLSSSLRLGELIDR--------------AQLHVFGRCGHWTQIEQT--DRFNRLVVEFFNE 272 (282)
T ss_dssp TTCSSSCHHHHHHHHHHCTT--------------EEEEEESSCCSCHHHHSH--HHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHhCCC--------------CeEEEECCCCCCccccCH--HHHHHHHHHHHhc
Confidence 99999999888777665432 588999999998643222 3455667788875
No 163
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.56 E-value=1e-13 Score=143.79 Aligned_cols=123 Identities=16% Similarity=0.140 Sum_probs=85.1
Q ss_pred EEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcc
Q 004766 454 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGG 533 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~ 533 (732)
.+++..+| .++.+...-+ ...|.||++||+++...... +..++...||.|+++|.||.|.....
T Consensus 17 ~~~~~~~g-~~l~~~~~g~------~~g~~vvllHG~~~~~~~~~----~~~~~~~~~~~vi~~D~~G~G~S~~~----- 80 (317)
T 1wm1_A 17 GWLDTGDG-HRIYWELSGN------PNGKPAVFIHGGPGGGISPH----HRQLFDPERYKVLLFDQRGCGRSRPH----- 80 (317)
T ss_dssp EEEECSSS-CEEEEEEEEC------TTSEEEEEECCTTTCCCCGG----GGGGSCTTTEEEEEECCTTSTTCBST-----
T ss_pred eEEEcCCC-cEEEEEEcCC------CCCCcEEEECCCCCcccchh----hhhhccccCCeEEEECCCCCCCCCCC-----
Confidence 34566688 8887654422 12466899999876543222 22334347999999999998865321
Q ss_pred cccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 534 ALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 534 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
......+++++.+.+..+++. ...+++.++|+|+||.+++.++.++|++++++|+..+.
T Consensus 81 -~~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 139 (317)
T 1wm1_A 81 -ASLDNNTTWHLVADIERLREM--AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIF 139 (317)
T ss_dssp -TCCTTCSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -cccccccHHHHHHHHHHHHHH--cCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccC
Confidence 111234566777766666655 23468999999999999999999999999999987654
No 164
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.56 E-value=4.5e-15 Score=150.39 Aligned_cols=232 Identities=13% Similarity=0.064 Sum_probs=135.3
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHh
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHK 531 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 531 (732)
+...+++.+| ++.+... .++.|+||++||..+... .|......++. +||.|+++|+||.|.......
T Consensus 4 ~~~~~~~~~~--~~~~~~~-------~~~~~~vv~lHG~~~~~~--~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~- 70 (279)
T 4g9e_A 4 NYHELETSHG--RIAVRES-------EGEGAPLLMIHGNSSSGA--IFAPQLEGEIG-KKWRVIAPDLPGHGKSTDAID- 70 (279)
T ss_dssp EEEEEEETTE--EEEEEEC-------CCCEEEEEEECCTTCCGG--GGHHHHHSHHH-HHEEEEEECCTTSTTSCCCSC-
T ss_pred EEEEEEcCCc--eEEEEec-------CCCCCeEEEECCCCCchh--HHHHHHhHHHh-cCCeEEeecCCCCCCCCCCCC-
Confidence 3445666555 4443322 245689999999876542 34443334456 899999999999886543100
Q ss_pred cccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc-CCCC---
Q 004766 532 GGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK-FTIG--- 607 (732)
Q Consensus 532 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~-~~~~--- 607 (732)
.....+++|+.+.+..+++. .+.+++.++|+|+||++++.++.++|+..+.+++..|......... +...
T Consensus 71 ----~~~~~~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~ 144 (279)
T 4g9e_A 71 ----PDRSYSMEGYADAMTEVMQQ--LGIADAVVFGWSLGGHIGIEMIARYPEMRGLMITGTPPVAREEVGQGFKSGPDM 144 (279)
T ss_dssp ----HHHHSSHHHHHHHHHHHHHH--HTCCCCEEEEETHHHHHHHHHTTTCTTCCEEEEESCCCCCGGGHHHHBCCSTTG
T ss_pred ----cccCCCHHHHHHHHHHHHHH--hCCCceEEEEECchHHHHHHHHhhCCcceeEEEecCCCCCCCccchhhccchhh
Confidence 00122456666666655554 2346899999999999999999999995555555555433211100 0000
Q ss_pred -----Cc--------ccc-ccCCCCCHHHHHHHHhcCc------------------ccCCCCCCCCCCCCCCCCCeEEEE
Q 004766 608 -----HA--------WVS-DFGCSEEEEEFYWLIKYSP------------------LHNVRRPWEQNPDKPFQYPSTLLL 655 (732)
Q Consensus 608 -----~~--------~~~-~~g~p~~~~~~~~~~~~sp------------------~~~~~~~~~~~~~~~~~~~p~Li~ 655 (732)
.. +.. .+..+..+...+.+....+ ...+. .+..|+|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~i~~P~l~i 214 (279)
T 4g9e_A 145 ALAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVA----------EAQLPIAVV 214 (279)
T ss_dssp GGGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHH----------HCCSCEEEE
T ss_pred hhcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHH----------hcCCCEEEE
Confidence 00 000 0112222222221211111 01112 267899999
Q ss_pred eeCCCCCCCchHHHHHH-HHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 656 TADHDDRVVPLHSLKLL-ATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 656 ~g~~D~~v~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
+|.+|..||+..+.++. +.+. .+.+++++++||....... .+..+.+.+||.+.-..
T Consensus 215 ~g~~D~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~gH~~~~~~p--~~~~~~i~~fl~~~~~~ 272 (279)
T 4g9e_A 215 NGRDEPFVELDFVSKVKFGNLW--------------EGKTHVIDNAGHAPFREAP--AEFDAYLARFIRDCTQL 272 (279)
T ss_dssp EETTCSSBCHHHHTTCCCSSBG--------------GGSCEEETTCCSCHHHHSH--HHHHHHHHHHHHHHHSS
T ss_pred EcCCCcccchHHHHHHhhccCC--------------CCeEEEECCCCcchHHhCH--HHHHHHHHHHHHHhhhh
Confidence 99999999988776654 2222 2477889999998643222 34566788899887544
No 165
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.56 E-value=1e-13 Score=143.16 Aligned_cols=235 Identities=13% Similarity=0.092 Sum_probs=136.6
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCC-CCCchhHH
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGG-GEYGEEWH 530 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~-g~~g~~~~ 530 (732)
+...++. +| .++.+...-+ +..|+||++||+.+.... |.. +...|+ +||.|+++|+||. |....
T Consensus 46 ~~~~v~~-~~-~~~~~~~~g~------~~~~~vv~lHG~~~~~~~--~~~-~~~~L~-~g~~vi~~D~~G~gG~s~~--- 110 (306)
T 2r11_A 46 KSFYIST-RF-GQTHVIASGP------EDAPPLVLLHGALFSSTM--WYP-NIADWS-SKYRTYAVDIIGDKNKSIP--- 110 (306)
T ss_dssp EEEEECC-TT-EEEEEEEESC------TTSCEEEEECCTTTCGGG--GTT-THHHHH-HHSEEEEECCTTSSSSCEE---
T ss_pred ceEEEec-CC-ceEEEEeeCC------CCCCeEEEECCCCCCHHH--HHH-HHHHHh-cCCEEEEecCCCCCCCCCC---
Confidence 3444544 45 5776655321 346899999999876533 443 345577 5999999999998 43211
Q ss_pred hcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc------C
Q 004766 531 KGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK------F 604 (732)
Q Consensus 531 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------~ 604 (732)
.....+++++.+.+..+++. ...+++.++|+|+||++++.++.++|++++++|+..|......... .
T Consensus 111 -----~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 183 (306)
T 2r11_A 111 -----ENVSGTRTDYANWLLDVFDN--LGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYAL 183 (306)
T ss_dssp -----CSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHHHHh--cCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHh
Confidence 11234566666666666654 2346899999999999999999999999999999998776421110 0
Q ss_pred C-CCCccc----ccc-CCC-CCHHHH---HHH-Hhc-CcccCCC---CCCC---CCCCCCCCCCeEEEEeeCCCCCCCch
Q 004766 605 T-IGHAWV----SDF-GCS-EEEEEF---YWL-IKY-SPLHNVR---RPWE---QNPDKPFQYPSTLLLTADHDDRVVPL 666 (732)
Q Consensus 605 ~-~~~~~~----~~~-g~p-~~~~~~---~~~-~~~-sp~~~~~---~~~~---~~~~~~~~~~p~Li~~g~~D~~v~~~ 666 (732)
. ....+. ..+ +.. .....+ +.. ... ..+.... .... .......+.+|+|+++|.+|..||+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 263 (306)
T 2r11_A 184 GLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPH 263 (306)
T ss_dssp TTTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHH
T ss_pred HHHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHH
Confidence 0 000000 000 110 010000 000 000 0000000 0000 00001136789999999999999988
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 667 HSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 667 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
++.++.+++. ..+++++++++||....... .+....+.+||.
T Consensus 264 ~~~~~~~~~~-------------~~~~~~~~~~~gH~~~~e~p--~~~~~~i~~fl~ 305 (306)
T 2r11_A 264 SALHRASSFV-------------PDIEAEVIKNAGHVLSMEQP--TYVNERVMRFFN 305 (306)
T ss_dssp HHHHHHHHHS-------------TTCEEEEETTCCTTHHHHSH--HHHHHHHHHHHC
T ss_pred HHHHHHHHHC-------------CCCEEEEeCCCCCCCcccCH--HHHHHHHHHHHh
Confidence 8776665432 23588999999997643222 244556677764
No 166
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.55 E-value=4.1e-14 Score=143.01 Aligned_cols=219 Identities=12% Similarity=0.024 Sum_probs=133.5
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| .++.+...-+.+ .+.|+||++||..+... .|.. +...|+ .+|.|+++|.||.|..... ..
T Consensus 9 ~~g-~~l~y~~~g~~~----~~~~~vvllHG~~~~~~--~~~~-~~~~L~-~~~~vi~~D~~G~G~S~~~--------~~ 71 (266)
T 2xua_A 9 VNG-TELHYRIDGERH----GNAPWIVLSNSLGTDLS--MWAP-QVAALS-KHFRVLRYDTRGHGHSEAP--------KG 71 (266)
T ss_dssp CSS-SEEEEEEESCSS----SCCCEEEEECCTTCCGG--GGGG-GHHHHH-TTSEEEEECCTTSTTSCCC--------SS
T ss_pred ECC-EEEEEEEcCCcc----CCCCeEEEecCccCCHH--HHHH-HHHHHh-cCeEEEEecCCCCCCCCCC--------CC
Confidence 478 888877653321 12689999999766543 4444 345567 6799999999998864321 12
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccc------cc---c-cCCCC-
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDML------RY---H-KFTIG- 607 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~------~~---~-~~~~~- 607 (732)
..+++++.+.+..+++. ...+++.++|+|+||.++..++.++|++++++|+..|..... .. . .....
T Consensus 72 ~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (266)
T 2xua_A 72 PYTIEQLTGDVLGLMDT--LKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHA 149 (266)
T ss_dssp CCCHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHH
T ss_pred CCCHHHHHHHHHHHHHh--cCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHH
Confidence 24566666655555544 233589999999999999999999999999999876643210 00 0 00000
Q ss_pred --CccccccCCC----CCHHHH-------------------HHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCC
Q 004766 608 --HAWVSDFGCS----EEEEEF-------------------YWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDR 662 (732)
Q Consensus 608 --~~~~~~~g~p----~~~~~~-------------------~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~ 662 (732)
......|-.+ .+++.. ..+........+. .+..|+|+++|.+|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~i~~P~lvi~G~~D~~ 219 (266)
T 2xua_A 150 LADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAP----------GIKVPALVISGTHDLA 219 (266)
T ss_dssp HHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGG----------GCCSCEEEEEETTCSS
T ss_pred HHHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhc----------cCCCCEEEEEcCCCCc
Confidence 0000011000 011111 1111222222222 3789999999999999
Q ss_pred CCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 663 VVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 663 v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
+|+..+.++.+.+.. .++++++ +||....... .+..+.+.+||.
T Consensus 220 ~~~~~~~~~~~~~~~--------------~~~~~~~-~gH~~~~e~p--~~~~~~i~~fl~ 263 (266)
T 2xua_A 220 ATPAQGRELAQAIAG--------------ARYVELD-ASHISNIERA--DAFTKTVVDFLT 263 (266)
T ss_dssp SCHHHHHHHHHHSTT--------------CEEEEES-CCSSHHHHTH--HHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhCCC--------------CEEEEec-CCCCchhcCH--HHHHHHHHHHHH
Confidence 999888777665542 3788899 9998643222 244556677774
No 167
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.55 E-value=2.8e-14 Score=146.76 Aligned_cols=225 Identities=15% Similarity=0.101 Sum_probs=133.2
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCC-CccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGF-NISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 537 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 537 (732)
.+| .++.+... ++.|.||++||.. +......|... ...|. ++|.|+++|+||.|.... ..
T Consensus 23 ~~g-~~l~y~~~--------g~g~~vvllHG~~~~~~~~~~~~~~-~~~L~-~~~~vi~~Dl~G~G~S~~--------~~ 83 (296)
T 1j1i_A 23 AGG-VETRYLEA--------GKGQPVILIHGGGAGAESEGNWRNV-IPILA-RHYRVIAMDMLGFGKTAK--------PD 83 (296)
T ss_dssp ETT-EEEEEEEE--------CCSSEEEEECCCSTTCCHHHHHTTT-HHHHT-TTSEEEEECCTTSTTSCC--------CS
T ss_pred ECC-EEEEEEec--------CCCCeEEEECCCCCCcchHHHHHHH-HHHHh-hcCEEEEECCCCCCCCCC--------CC
Confidence 478 88776532 2347899999974 22212234433 35566 569999999999886531 11
Q ss_pred CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc-C----CCCCcc--
Q 004766 538 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK-F----TIGHAW-- 610 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~-~----~~~~~~-- 610 (732)
...+++++.+.+..+++.-.. .+++.++|+|+||++++.++.++|++++++|+..|......... . .....+
T Consensus 84 ~~~~~~~~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (296)
T 1j1i_A 84 IEYTQDRRIRHLHDFIKAMNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREG 162 (296)
T ss_dssp SCCCHHHHHHHHHHHHHHSCC-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCC-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchH
Confidence 123556666655555544111 26899999999999999999999999999998877542110000 0 000000
Q ss_pred ----ccc-cCCC--CCHHHH-------------HHHHh----c---C-cc---cCCCCCCCCCCCCCCCCCeEEEEeeCC
Q 004766 611 ----VSD-FGCS--EEEEEF-------------YWLIK----Y---S-PL---HNVRRPWEQNPDKPFQYPSTLLLTADH 659 (732)
Q Consensus 611 ----~~~-~g~p--~~~~~~-------------~~~~~----~---s-p~---~~~~~~~~~~~~~~~~~~p~Li~~g~~ 659 (732)
... +.++ ..++.. ..+.. . . .. ..+. .+..|+|+++|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~i~~P~Lii~G~~ 232 (296)
T 1j1i_A 163 MVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIR----------KVQVPTLVVQGKD 232 (296)
T ss_dssp HHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHT----------TCCSCEEEEEETT
T ss_pred HHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhh----------cCCCCEEEEEECC
Confidence 000 1111 111110 00110 0 0 00 1122 3789999999999
Q ss_pred CCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC
Q 004766 660 DDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 729 (732)
Q Consensus 660 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 729 (732)
|..||+..+.++.+.+. ..++.+++++||....... .+..+.+.+||.+.++..
T Consensus 233 D~~~~~~~~~~~~~~~~--------------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~~~~~~ 286 (296)
T 1j1i_A 233 DKVVPVETAYKFLDLID--------------DSWGYIIPHCGHWAMIEHP--EDFANATLSFLSLRVDIT 286 (296)
T ss_dssp CSSSCHHHHHHHHHHCT--------------TEEEEEESSCCSCHHHHSH--HHHHHHHHHHHHHC----
T ss_pred CcccCHHHHHHHHHHCC--------------CCEEEEECCCCCCchhcCH--HHHHHHHHHHHhccCCcC
Confidence 99999988887766543 2578899999998643222 345567889999887654
No 168
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.55 E-value=2.3e-14 Score=152.62 Aligned_cols=114 Identities=15% Similarity=0.110 Sum_probs=78.0
Q ss_pred ccEEEEEcCCCCccCCC-------CcChhHH--HHHHhcCcEEEEEcccC-CCCC-chhHHhc--cc---ccCCccHHHH
Q 004766 481 HPCLLYGYGGFNISVTP-------SFSVSRT--ILMRHLGAVFCIANIRG-GGEY-GEEWHKG--GA---LAKKQNCFDD 544 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~-------~~~~~~~--~~l~~~G~~v~~~~~rG-~g~~-g~~~~~~--~~---~~~~~~~~~D 544 (732)
.|+||++||..+..... .|..... ..|+++||.|+++|+|| .|+. +..-... +. ......+++|
T Consensus 59 ~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~ 138 (377)
T 2b61_A 59 NNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQD 138 (377)
T ss_dssp CCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHH
T ss_pred CCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCccccccccccCCcccHHH
Confidence 68999999998775431 1332211 13534899999999999 3432 2210000 00 0011346788
Q ss_pred HHHHHHHHHHcCCCCCCcEE-EEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 545 FISASEYLISAGYTQSRKLC-IEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 545 ~~~~~~~l~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
+.+.+..+++. .+.+++. ++|+|+||++++.++.++|++++++|+..|..
T Consensus 139 ~~~~l~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 189 (377)
T 2b61_A 139 IVKVQKALLEH--LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSI 189 (377)
T ss_dssp HHHHHHHHHHH--TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCS
T ss_pred HHHHHHHHHHH--cCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCc
Confidence 88888877765 3446887 99999999999999999999999999988854
No 169
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.55 E-value=4.7e-14 Score=143.52 Aligned_cols=116 Identities=12% Similarity=-0.009 Sum_probs=79.1
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccC
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 537 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 537 (732)
+.+| .++.+... + ..|.||++||..+... .|... ...|.++||.|+++|+||.|..... .
T Consensus 9 ~~~g-~~l~y~~~---g-----~~~pvvllHG~~~~~~--~~~~~-~~~L~~~g~~vi~~D~~G~G~S~~~--------~ 68 (279)
T 1hkh_A 9 NSTP-IELYYEDQ---G-----SGQPVVLIHGYPLDGH--SWERQ-TRELLAQGYRVITYDRRGFGGSSKV--------N 68 (279)
T ss_dssp TTEE-EEEEEEEE---S-----SSEEEEEECCTTCCGG--GGHHH-HHHHHHTTEEEEEECCTTSTTSCCC--------S
T ss_pred CCCC-eEEEEEec---C-----CCCcEEEEcCCCchhh--HHhhh-HHHHHhCCcEEEEeCCCCCCCCCCC--------C
Confidence 3467 67654432 1 2345999999876542 34443 4556658999999999998865321 1
Q ss_pred CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCC-eeeEEEEcCCc
Q 004766 538 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD-LFGCALAHVGV 595 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-~f~a~v~~~p~ 595 (732)
...+++++.+.+..+++. .+.+++.++|||+||.+++.++.++|+ +++++|+..|+
T Consensus 69 ~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~ 125 (279)
T 1hkh_A 69 TGYDYDTFAADLHTVLET--LDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASL 125 (279)
T ss_dssp SCCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred CCCCHHHHHHHHHHHHHh--cCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccC
Confidence 223445554444444433 234689999999999999999999999 99999988764
No 170
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.54 E-value=2.1e-12 Score=131.45 Aligned_cols=232 Identities=9% Similarity=0.010 Sum_probs=155.4
Q ss_pred ceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCC-CCCCCeE
Q 004766 156 DWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT-KQSEDIL 234 (732)
Q Consensus 156 e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt-~~~~~~~ 234 (732)
...+|++||+.+++.............++|||||+.|++.. ...|+++++.+ +... .
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--------------------~~~i~~~d~~~~~~~~--~ 77 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS--------------------EGLLYRLSLAGDPSPE--K 77 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE--------------------TTEEEEEESSSCCSCE--E
T ss_pred cceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc--------------------CCeEEEEeCCCCCCce--E
Confidence 34799999999988553322222357899999999999864 12699999987 5322 2
Q ss_pred EEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCC
Q 004766 235 CWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDT 314 (732)
Q Consensus 235 v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~ 314 (732)
+.... .......+.|||||++|++...... ....||.+++.++. ...+..........|+|||+
T Consensus 78 ~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~--------------~~~~~~~~~~~~~~~spdg~ 141 (297)
T 2ojh_A 78 VDTGF-ATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGGT--------------PRLMTKNLPSYWHGWSPDGK 141 (297)
T ss_dssp CCCTT-CCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCCC--------------CEECCSSSSEEEEEECTTSS
T ss_pred ecccc-ccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCCc--------------eEEeecCCCccceEECCCCC
Confidence 32222 1123457899999999988874322 25779999987642 22333222222336999999
Q ss_pred eEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEEEEEecCCeeEEEEEeCCCCceeeeccccc
Q 004766 315 VFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEI 393 (732)
Q Consensus 315 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~ 393 (732)
.|++....++ ..+|+.+++.++. ...+..+. ..+..+.|++++ .+++....++..+|+.+++.+++ ...+....
T Consensus 142 ~l~~~~~~~~-~~~l~~~~~~~~~-~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~ 216 (297)
T 2ojh_A 142 SFTYCGIRDQ-VFDIYSMDIDSGV-ETRLTHGE--GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSS-VERITDSA 216 (297)
T ss_dssp EEEEEEEETT-EEEEEEEETTTCC-EEECCCSS--SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-EEECCCCS
T ss_pred EEEEEECCCC-ceEEEEEECCCCc-ceEcccCC--CccccceECCCCCEEEEEecCCCCccEEEECCCCCC-cEEEecCC
Confidence 9987765443 4689999887765 44444433 457788998765 46666656777788888876444 36666555
Q ss_pred ceeeEeecccCCcEEEEEEecCC-------CCceEEEEECCCCC
Q 004766 394 GSVNAISARREDSVVFISFTSFL-------IPGIVYQCNLKTET 430 (732)
Q Consensus 394 g~v~~~~~s~d~~~l~~~~ss~~-------~p~~~y~~d~~~~~ 430 (732)
..+..+.++++++.+++...... ....++.+|+.+++
T Consensus 217 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 217 YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 66777889999998877655432 23679999998875
No 171
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.54 E-value=2.4e-12 Score=155.94 Aligned_cols=290 Identities=9% Similarity=-0.002 Sum_probs=175.8
Q ss_pred CCCCCcEEeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEecc-CCceEE
Q 004766 81 PRYDAPFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYS-GSDWAT 159 (732)
Q Consensus 81 ~~~~~p~~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~-G~e~~~ 159 (732)
..+..|.+.|++++|... ..||+.+..+++.+.|... ...+..++|||||++|||+.... .....+
T Consensus 15 ~~~~~~~~S~~~iaf~~~------~~l~~~~~~gg~~~~lt~~-------~~~v~~~~~SPDG~~la~~s~~~~~~~~~~ 81 (1045)
T 1k32_A 15 NLLLNPDIHGDRIIFVCC------DDLWEHDLKSGSTRKIVSN-------LGVINNARFFPDGRKIAIRVMRGSSLNTAD 81 (1045)
T ss_dssp CCCEEEEEETTEEEEEET------TEEEEEETTTCCEEEEECS-------SSEEEEEEECTTSSEEEEEEEESTTCCEEE
T ss_pred ceEeCcEEeCCEEEEEEC------CcEEEEECCCCcEEEeeeC-------CCcccCeEECCCCCEEEEEEeeccCCCCCe
Confidence 445566667888888764 2488887766666666542 23467899999999999998651 012369
Q ss_pred EEEEECCCCceecccccceee-------eeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCC
Q 004766 160 IKLMRIEDQIVEADALSWFKF-------SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSED 232 (732)
Q Consensus 160 i~v~dl~~g~~~~~~~~~~~~-------~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~ 232 (732)
|++||+++|+....+...... ..++|||||+ |+|+...... .....+||.+++.++....
T Consensus 82 i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~------------~~~~~~l~~~~~~~g~~~~ 148 (1045)
T 1k32_A 82 LYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQP------------FSSMTCLYRVENDGINFVP 148 (1045)
T ss_dssp EEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCC-EEEEECTTSS------------STTCCEEEEEEGGGTEEEE
T ss_pred EEEEECCCCCeEEcccCCCcccccccccccccCCCCCE-EEEEECCcCC------------CcccceEEEEECCCCCeEE
Confidence 999999999855444333333 6799999999 7777643211 1122345555553321100
Q ss_pred e-------------EEEe-------------------------c-------CCCCeeEEEeEEecCCcEEEEEEecCCcc
Q 004766 233 I-------------LCWK-------------------------D-------PEHPKYIFSGHVTEDGQYLVMCIEENCDP 267 (732)
Q Consensus 233 ~-------------~v~~-------------------------~-------~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 267 (732)
+ +++. . ..+......+.|++| .+++.+....
T Consensus 149 l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d--~l~~~~~~dg-- 224 (1045)
T 1k32_A 149 LNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH--RIYFITDIDG-- 224 (1045)
T ss_dssp CCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT--EEEEEECTTS--
T ss_pred ecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC--EEEEEEeccC--
Confidence 0 0000 0 011122345678877 5666654332
Q ss_pred eEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC
Q 004766 268 VNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA 347 (732)
Q Consensus 268 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~ 347 (732)
...||.+++.++. .+.++.........|+|||+.|++.. ...|+.+++.+.. ...+..+.
T Consensus 225 ~~~l~~~~~~g~~--------------~~~l~~~~~~~~~~~SpDG~~la~~~-----~~~i~~~d~~~~~-l~~l~~~~ 284 (1045)
T 1k32_A 225 FGQIYSTDLDGKD--------------LRKHTSFTDYYPRHLNTDGRRILFSK-----GGSIYIFNPDTEK-IEKIEIGD 284 (1045)
T ss_dssp SCEEEEEETTSCS--------------CEECCCCCSSCEEEEEESSSCEEEEE-----TTEEEEECTTTCC-EEECCCCC
T ss_pred ceEEEEEeCCCCc--------------ceEecCCCCcceeeEcCCCCEEEEEe-----CCEEEEecCCceE-eeeeccCc
Confidence 4678988876532 23333322222346999999988864 3479999985443 33332211
Q ss_pred ---------CCCceeEEEEe-cCCE-EEEEEecCCeeEEEEEeCCCCceeeecccccc-eeeEeecccCCcEEEEEEecC
Q 004766 348 ---------ERDVLESATAV-NLNQ-MIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIG-SVNAISARREDSVVFISFTSF 415 (732)
Q Consensus 348 ---------~~~~l~~~~~~-~~~~-l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g-~v~~~~~s~d~~~l~~~~ss~ 415 (732)
....+..+.|+ +++. +++.. + ..|+++++.+++. ..+..+.+ .+..+.++ |++.+++...
T Consensus 285 ~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~--~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~s-dg~~l~~~s~-- 356 (1045)
T 1k32_A 285 LESPEDRIISIPSKFAEDFSPLDGDLIAFVS--R--GQAFIQDVSGTYV-LKVPEPLRIRYVRRGGD-TKVAFIHGTR-- 356 (1045)
T ss_dssp CCBCCSEEEECGGGGEEEEEECGGGCEEEEE--T--TEEEEECTTSSBE-EECSCCSCEEEEEECSS-SEEEEEEEET--
T ss_pred ccccccccccccccceeeecCCCCCEEEEEE--c--CEEEEEcCCCCce-EEccCCCcceEEeeeEc-CCCeEEEEEC--
Confidence 01246788999 8654 54444 2 4799999986665 45654445 67788888 8877765433
Q ss_pred CCCceEE-EEECCCCC
Q 004766 416 LIPGIVY-QCNLKTET 430 (732)
Q Consensus 416 ~~p~~~y-~~d~~~~~ 430 (732)
...++ .+|+.+++
T Consensus 357 --~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 357 --EGDFLGIYDYRTGK 370 (1045)
T ss_dssp --TEEEEEEEETTTCC
T ss_pred --CCceEEEEECCCCC
Confidence 45888 88987764
No 172
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.54 E-value=9.6e-14 Score=132.59 Aligned_cols=174 Identities=11% Similarity=-0.062 Sum_probs=118.9
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
++.|.||++||..+.... .|...+...+. .+ +.++.+|.+ ...++++.+.+..+++. .
T Consensus 15 g~~~~vv~~HG~~~~~~~-~~~~~~~~~~~-~~---~~v~~~~~~---------------~~~~~~~~~~~~~~~~~--~ 72 (191)
T 3bdv_A 15 SQQLTMVLVPGLRDSDDE-HWQSHWERRFP-HW---QRIRQREWY---------------QADLDRWVLAIRRELSV--C 72 (191)
T ss_dssp HTTCEEEEECCTTCCCTT-SHHHHHHHHCT-TS---EECCCSCCS---------------SCCHHHHHHHHHHHHHT--C
T ss_pred CCCceEEEECCCCCCchh-hHHHHHHHhcC-Ce---EEEeccCCC---------------CcCHHHHHHHHHHHHHh--c
Confidence 456899999998765422 33333322233 33 345666632 23456777777666664 2
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCC
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRP 638 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~ 638 (732)
+ +++.++|+|+||++++.++.++|++++++|+..|........ +.. ....+
T Consensus 73 ~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~--------------~~~-------------~~~~~- 123 (191)
T 3bdv_A 73 T-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFEI--------------DDR-------------IQASP- 123 (191)
T ss_dssp S-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGTC--------------TTT-------------SCSSC-
T ss_pred C-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccccC--------------ccc-------------ccccc-
Confidence 3 799999999999999999999999999999999876543111 000 12222
Q ss_pred CCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchH-HHHHHHHH
Q 004766 639 WEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQ-KMIDEAAD 717 (732)
Q Consensus 639 ~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~ 717 (732)
+..|+|+++|.+|..||+.++.++++.+ . .++++++++||....... ..-+..+.
T Consensus 124 ---------~~~P~lii~g~~D~~~~~~~~~~~~~~~-~--------------~~~~~~~~~gH~~~~~~~~~~~~~~~~ 179 (191)
T 3bdv_A 124 ---------LSVPTLTFASHNDPLMSFTRAQYWAQAW-D--------------SELVDVGEAGHINAEAGFGPWEYGLKR 179 (191)
T ss_dssp ---------CSSCEEEEECSSBTTBCHHHHHHHHHHH-T--------------CEEEECCSCTTSSGGGTCSSCHHHHHH
T ss_pred ---------CCCCEEEEecCCCCcCCHHHHHHHHHhc-C--------------CcEEEeCCCCcccccccchhHHHHHHH
Confidence 6789999999999999999988888776 2 478899999999754210 11234467
Q ss_pred HHHHHHHHhC
Q 004766 718 RYGFMAKMLG 727 (732)
Q Consensus 718 ~~~fl~~~l~ 727 (732)
+.+||.+..|
T Consensus 180 i~~fl~~~~~ 189 (191)
T 3bdv_A 180 LAEFSEILIP 189 (191)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHHHHhcc
Confidence 7788876543
No 173
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.53 E-value=5e-14 Score=144.11 Aligned_cols=213 Identities=13% Similarity=-0.016 Sum_probs=126.6
Q ss_pred CccEEEEEcCCC-CccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 480 SHPCLLYGYGGF-NISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 480 ~~P~vv~~hG~~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
+.|.||++||.. +......|.......|. .+|.|+++|.||.|..... .....+++++.+.+..+++. .
T Consensus 32 ~g~~vvllHG~~~~~~~~~~w~~~~~~~L~-~~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~--l 101 (286)
T 2puj_A 32 NGETVIMLHGGGPGAGGWSNYYRNVGPFVD-AGYRVILKDSPGFNKSDAV-------VMDEQRGLVNARAVKGLMDA--L 101 (286)
T ss_dssp CSSEEEEECCCSTTCCHHHHHTTTHHHHHH-TTCEEEEECCTTSTTSCCC-------CCSSCHHHHHHHHHHHHHHH--T
T ss_pred CCCcEEEECCCCCCCCcHHHHHHHHHHHHh-ccCEEEEECCCCCCCCCCC-------CCcCcCHHHHHHHHHHHHHH--h
Confidence 357899999974 32222234443314566 5699999999998864321 11134677777766666654 2
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc------------C--CCCCccc----cc-cCCC--
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK------------F--TIGHAWV----SD-FGCS-- 617 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------------~--~~~~~~~----~~-~g~p-- 617 (732)
..+++.++|+|+||.+++.++.++|++++++|+..|......... . ....... .. +.++
T Consensus 102 ~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (286)
T 2puj_A 102 DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSL 181 (286)
T ss_dssp TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGG
T ss_pred CCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCcc
Confidence 346899999999999999999999999999998876532110000 0 0000000 00 0111
Q ss_pred CCHHHH--------------HHHHh-c--Cc--ccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHh
Q 004766 618 EEEEEF--------------YWLIK-Y--SP--LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYV 678 (732)
Q Consensus 618 ~~~~~~--------------~~~~~-~--sp--~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~ 678 (732)
..++.. ..+.. + .+ ...... ....+..|+||++|++|..+|+..+.++++.+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~-- 253 (286)
T 2puj_A 182 ITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTA------RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNID-- 253 (286)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGG------GGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSS--
T ss_pred CCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhh------HHhhcCCCEEEEEECCCCccCHHHHHHHHHHCC--
Confidence 011111 11100 0 00 000100 011378999999999999999998887766543
Q ss_pred hcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 679 LCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
..++++++++||....... .+..+.+.+||.+
T Consensus 254 ------------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 285 (286)
T 2puj_A 254 ------------DARLHVFSKCGAWAQWEHA--DEFNRLVIDFLRH 285 (286)
T ss_dssp ------------SEEEEEESSCCSCHHHHTH--HHHHHHHHHHHHH
T ss_pred ------------CCeEEEeCCCCCCccccCH--HHHHHHHHHHHhc
Confidence 2588899999998643222 2445567788864
No 174
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.53 E-value=1.3e-14 Score=148.60 Aligned_cols=116 Identities=13% Similarity=0.051 Sum_probs=86.1
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| .++.+...-+ ...|+||++||..+... .|.. +...|+ +||.|+++|.||.|.... ...
T Consensus 17 ~~g-~~l~~~~~g~------~~~~~vl~lHG~~~~~~--~~~~-~~~~l~-~~~~v~~~d~~G~G~s~~--------~~~ 77 (299)
T 3g9x_A 17 VLG-ERMHYVDVGP------RDGTPVLFLHGNPTSSY--LWRN-IIPHVA-PSHRCIAPDLIGMGKSDK--------PDL 77 (299)
T ss_dssp ETT-EEEEEEEESC------SSSCCEEEECCTTCCGG--GGTT-THHHHT-TTSCEEEECCTTSTTSCC--------CCC
T ss_pred eCC-eEEEEEecCC------CCCCEEEEECCCCccHH--HHHH-HHHHHc-cCCEEEeeCCCCCCCCCC--------CCC
Confidence 378 8887765532 23578999999877643 3443 345566 799999999999886432 112
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
..+++++.+.+..+++. .+.+++.++|+|+||+++..++.++|++++++|+..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 132 (299)
T 3g9x_A 78 DYFFDDHVRYLDAFIEA--LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFI 132 (299)
T ss_dssp CCCHHHHHHHHHHHHHH--TTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEEC
T ss_pred cccHHHHHHHHHHHHHH--hCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCC
Confidence 45677777777777665 34568999999999999999999999999999887643
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.53 E-value=1.8e-12 Score=150.33 Aligned_cols=257 Identities=11% Similarity=0.072 Sum_probs=164.6
Q ss_pred ECCCCcEEEEEEeccCCceEEEEEEECCCCcee--cc--c--ccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 139 VSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE--AD--A--LSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 139 ~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~--~~--~--~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
++|||++++|....+|.....||+++..+|+.. .+ . ... ....+++|||||+.|+|+....
T Consensus 79 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~------------ 146 (710)
T 2xdw_A 79 HFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSAS------------ 146 (710)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEET------------
T ss_pred CEEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCC------------
Confidence 349999999999888876678999998777532 11 1 111 1347899999999999997643
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCC-----------cceEEEEEEeCCCCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENC-----------DPVNKVYYCDLSALP 280 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-----------~~~~~l~~~d~~~~~ 280 (732)
.....+|+++++.++......+ .... ..+++|||||+.|++...+.. ....+||++++.++.
T Consensus 147 --G~~~~~i~v~d~~tg~~~~~~~-~~~~----~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 147 --GSDWVTIKFMKVDGAKELPDVL-ERVK----FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp --TCSCEEEEEEETTTTEEEEEEE-EEEC----SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG
T ss_pred --CCceEEEEEEECCCCCCCcccc-cCcc----cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCc
Confidence 1223479999998875332222 1111 236899999999999886543 124579999997743
Q ss_pred CCcccccccCCCCCcEEeeeccc-c---eEEEEEecCCeEEEEeCCCCC-CceEEEEeCCC------CC-CceEeccCCC
Q 004766 281 EGLEGFKKRDGLLPFVKLIDGFD-A---QYEVIANDDTVFTFLTNKDAP-KYKIIRVDLKE------PN-DWFEVIPEAE 348 (732)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~~~-~---~~~~~s~dg~~l~~~s~~~~~-~~~l~~~d~~~------~~-~~~~l~~~~~ 348 (732)
.. ...+....+ . ....|||||+.|++.+.+... ...|+.+|+++ +. .++.|..+..
T Consensus 220 ~~------------~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~ 287 (710)
T 2xdw_A 220 SE------------DILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE 287 (710)
T ss_dssp GG------------CEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS
T ss_pred cc------------ceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC
Confidence 10 112222111 1 123599999999998875432 56899999986 42 3677776552
Q ss_pred CCceeEEEEecCCEEEEEEecCC-eeEEEEEeCCCCc--eeeecccc-c-ceeeEeecccCCcEEEEEEecCCCCceEEE
Q 004766 349 RDVLESATAVNLNQMIVSYLSDV-KYVLQIRDLKNGS--LLHQLPIE-I-GSVNAISARREDSVVFISFTSFLIPGIVYQ 423 (732)
Q Consensus 349 ~~~l~~~~~~~~~~l~~~~~~~g-~~~l~~~d~~~g~--~~~~l~~~-~-g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~ 423 (732)
.....+. .+++.+++....++ ..+|+++++++++ ..+.|..+ . ..+..+.++ +++.+++++..- .-.+++.
T Consensus 288 -~~~~~~s-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~-g~~~l~~ 363 (710)
T 2xdw_A 288 -GEYDYVT-NEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHD-VKNTLQL 363 (710)
T ss_dssp -SCEEEEE-EETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEET-TEEEEEE
T ss_pred -cEEEEEe-ccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEEC-CEEEEEE
Confidence 3222222 23477888877654 5689999998664 12444433 2 256666666 355677766553 3457899
Q ss_pred EECCCCC
Q 004766 424 CNLKTET 430 (732)
Q Consensus 424 ~d~~~~~ 430 (732)
+++.+++
T Consensus 364 ~~~~~g~ 370 (710)
T 2xdw_A 364 HDLATGA 370 (710)
T ss_dssp EETTTCC
T ss_pred EECCCCC
Confidence 9986664
No 176
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.52 E-value=2.4e-13 Score=140.80 Aligned_cols=123 Identities=14% Similarity=0.031 Sum_probs=84.8
Q ss_pred EEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcc
Q 004766 454 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGG 533 (732)
Q Consensus 454 ~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~ 533 (732)
..++..+| .++.+...-+ ...|.||++||+++...... +..++..+||.|+++|.||.|.....
T Consensus 14 ~~~~~~~g-~~l~y~~~G~------~~g~pvvllHG~~~~~~~~~----~~~~~~~~~~~vi~~D~~G~G~S~~~----- 77 (313)
T 1azw_A 14 GSLKVDDR-HTLYFEQCGN------PHGKPVVMLHGGPGGGCNDK----MRRFHDPAKYRIVLFDQRGSGRSTPH----- 77 (313)
T ss_dssp EEEECSSS-CEEEEEEEEC------TTSEEEEEECSTTTTCCCGG----GGGGSCTTTEEEEEECCTTSTTSBST-----
T ss_pred ceEEcCCC-CEEEEEecCC------CCCCeEEEECCCCCccccHH----HHHhcCcCcceEEEECCCCCcCCCCC-----
Confidence 34566688 8887654432 12466899999876542221 12334347999999999998865321
Q ss_pred cccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 534 ALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 534 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
......+++++.+.+..+++. ...+++.++|+|+||++++.++.++|++++++|+..+.
T Consensus 78 -~~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 78 -ADLVDNTTWDLVADIERLRTH--LGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp -TCCTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -cccccccHHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 111234566776666666654 23358999999999999999999999999999987654
No 177
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.52 E-value=1.3e-13 Score=144.14 Aligned_cols=126 Identities=13% Similarity=0.051 Sum_probs=80.8
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| .++.+...-+.+. +.+.+.||++||+++... .|...+..+..+.||.|+++|.||.|.....-. ....
T Consensus 35 ~~g-~~l~y~~~G~~~~--~~~g~plvllHG~~~~~~--~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~----~~~~ 105 (330)
T 3nwo_A 35 FGD-HETWVQVTTPENA--QPHALPLIVLHGGPGMAH--NYVANIAALADETGRTVIHYDQVGCGNSTHLPD----APAD 105 (330)
T ss_dssp ETT-EEEEEEEECCSSC--CTTCCCEEEECCTTTCCS--GGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTT----SCGG
T ss_pred ecC-cEEEEEEecCccC--CCCCCcEEEECCCCCCch--hHHHHHHHhccccCcEEEEECCCCCCCCCCCCC----Cccc
Confidence 378 8998877765321 111236888999887653 344444444433699999999999886532000 0001
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
..+++++.+.+..+++. ...+++.++|+|+||++++.++.++|+++.++|+..+.
T Consensus 106 ~~~~~~~a~dl~~ll~~--lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~ 160 (330)
T 3nwo_A 106 FWTPQLFVDEFHAVCTA--LGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSP 160 (330)
T ss_dssp GCCHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCC
T ss_pred cccHHHHHHHHHHHHHH--cCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCC
Confidence 12334444433333332 12358999999999999999999999999999876654
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.52 E-value=4.5e-12 Score=133.16 Aligned_cols=236 Identities=12% Similarity=0.026 Sum_probs=148.8
Q ss_pred EEEEeEEECCCCcEEEEEEecc----CCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYS----GSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~----G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
..++.+++ ||++|||+.... +....+||++|+++|+.... . ....++|||||+.|+|.+.+..
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l--~--~~~~~~~SpDg~~la~~~~~~~------- 81 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI--E--NATMPRISPDGKKIAFMRANEE------- 81 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE--E--SCEEEEECTTSSEEEEEEEETT-------
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc--c--cCCCeEECCCCCEEEEEEeccC-------
Confidence 34678888 999999997542 22357899999999875433 2 2478999999999999875431
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCC----------------------
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENC---------------------- 265 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~---------------------- 265 (732)
....+||++++.++.. ..+...+ . ...+.|||||++|++.+.+..
T Consensus 82 -------~~~~~l~~~~~~~g~~--~~l~~~~---~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (347)
T 2gop_A 82 -------KKVSEIWVADLETLSS--KKILEAK---N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFD 148 (347)
T ss_dssp -------TTEEEEEEEETTTTEE--EEEEEES---E-EEEEEECTTSSEEEEEEECCCC---------CCCC--------
T ss_pred -------CCcceEEEEECCCCce--EEEEcCC---C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccccc
Confidence 1234699999876543 2343332 2 568999999999999875310
Q ss_pred cceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCC-----C-CceEEEEeCCCCCC
Q 004766 266 DPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDA-----P-KYKIIRVDLKEPND 339 (732)
Q Consensus 266 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~-----~-~~~l~~~d~~~~~~ 339 (732)
.....||++++.++. ..+.+... ......|+||| ++|.++.+. . ..+|+.+| ++.
T Consensus 149 ~~~~~l~~~d~~~~~-------------~~~~l~~~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~- 209 (347)
T 2gop_A 149 GEKTTFWIFDTESEE-------------VIEEFEKP-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGK- 209 (347)
T ss_dssp -CEEEEEEEETTTTE-------------EEEEEEEE-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTE-
T ss_pred CccceEEEEECCCCe-------------EEeeecCC-CcccccCCCCe--EEEEEecccccccccccccEEEeC--CCc-
Confidence 114679999998743 11333332 33344699998 666665432 1 56899999 444
Q ss_pred ceEeccCCCCCceeEEEEecC-CEEEEEEecC-----CeeEEEEEeCCCCceeeecccc-cceeeE-eecccCCcEEEEE
Q 004766 340 WFEVIPEAERDVLESATAVNL-NQMIVSYLSD-----VKYVLQIRDLKNGSLLHQLPIE-IGSVNA-ISARREDSVVFIS 411 (732)
Q Consensus 340 ~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~-----g~~~l~~~d~~~g~~~~~l~~~-~g~v~~-~~~s~d~~~l~~~ 411 (732)
.+.+..+ ..+..+ +++ +.|++..... ...+|+++| +|+. +.+... .+.+.. +.++ |+ ++++
T Consensus 210 ~~~l~~~---~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~~~~~~~~~~~~s-dg--~~~~ 278 (347)
T 2gop_A 210 EEKMFEK---VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV-MGILDEVDRGVGQAKIKD-GK--VYFT 278 (347)
T ss_dssp EEEEEEE---ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE-EESSTTCCSEEEEEEEET-TE--EEEE
T ss_pred eEEeccC---cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCce-EeccccCCcccCCccEEc-Cc--EEEE
Confidence 4556543 223333 554 4566665443 236899998 4665 455433 455654 6677 65 5555
Q ss_pred EecCCCCceEEEEE
Q 004766 412 FTSFLIPGIVYQCN 425 (732)
Q Consensus 412 ~ss~~~p~~~y~~d 425 (732)
.+.. .-..+| ++
T Consensus 279 ~~~~-~~~~l~-~~ 290 (347)
T 2gop_A 279 LFEE-GSVNLY-IW 290 (347)
T ss_dssp EEET-TEEEEE-EE
T ss_pred EecC-CcEEEE-Ec
Confidence 4432 245677 77
No 179
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.52 E-value=7e-14 Score=144.89 Aligned_cols=224 Identities=13% Similarity=0.041 Sum_probs=145.0
Q ss_pred eEEEEEEEcc-CCCeeEEEEEEEcCCCCC-CCCccEEEEEcCCCCccCCCCcChhHHHHHHh------cCcEEEEEcccC
Q 004766 450 HVHQVFVPSK-DGSTKIPMFIVSKKNIKL-DGSHPCLLYGYGGFNISVTPSFSVSRTILMRH------LGAVFCIANIRG 521 (732)
Q Consensus 450 ~~~~~~~~s~-dG~~~i~~~~~~p~~~~~-~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~------~G~~v~~~~~rG 521 (732)
.++.+.+.|. -| .+..++++.|+++.. .+++|+|++.||..... . ...+...+.. .+++||.++..
T Consensus 11 ~v~~~~~~S~~l~-~~r~~~VylP~~y~~~~~~yPVlylldG~~~f~---~-~~~~~~~l~~~~~~~~~~~IvV~i~~~- 84 (331)
T 3gff_A 11 EYQSKRLESRLLK-ETREYVIALPEGYAQSLEAYPVVYLLDGEDQFD---H-MASLLQFLSQGTMPQIPKVIIVGIHNT- 84 (331)
T ss_dssp CEEEEEEEETTTT-EEEEEEEECCTTGGGSCCCEEEEEESSHHHHHH---H-HHHHHHHHTCSSSCSSCCCEEEEECCS-
T ss_pred eEEEEEEEecCCC-CeEEEEEEeCCCCCCCCCCccEEEEecChhhhH---H-HHHHHHHHHhhhhcCCCCEEEEEECCC-
Confidence 4566667665 57 899999999999765 67899999999952110 0 1123344442 36888887751
Q ss_pred CCCCchhHHhc-------c-------cccCCccHHHHHH--HHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCe
Q 004766 522 GGEYGEEWHKG-------G-------ALAKKQNCFDDFI--SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL 585 (732)
Q Consensus 522 ~g~~g~~~~~~-------~-------~~~~~~~~~~D~~--~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~ 585 (732)
....++... | ....+...+.+++ .++.++.++-.+++.| +|+|+|+||++++.++.++|++
T Consensus 85 --~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~~p~~ 161 (331)
T 3gff_A 85 --NRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRTDRPL 161 (331)
T ss_dssp --SHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHTTCSS
T ss_pred --CcccccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHhCchh
Confidence 111111100 0 0022334566666 4566666665567655 8999999999999999999999
Q ss_pred eeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCC----
Q 004766 586 FGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDD---- 661 (732)
Q Consensus 586 f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~---- 661 (732)
|+++++.+|.+.+ .++ ...+.+... +..... ...|+++.||..|.
T Consensus 162 F~~~~~~S~~~w~----------------~~~---~~~~~~~~~--~~~~~~----------~~~~l~l~~G~~d~~~~~ 210 (331)
T 3gff_A 162 FSAYLALDTSLWF----------------DSP---HYLTLLEER--VVKGDF----------KQKQLFMAIANNPLSPGF 210 (331)
T ss_dssp CSEEEEESCCTTT----------------TTT---HHHHHHHHH--HHHCCC----------SSEEEEEEECCCSEETTT
T ss_pred hheeeEeCchhcC----------------ChH---HHHHHHHHH--hhcccC----------CCCeEEEEeCCCCCCCcc
Confidence 9999999996421 111 111111111 111111 34699999999998
Q ss_pred ---CCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 004766 662 ---RVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 662 ---~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 725 (732)
+++..++.+++++|+.. ...|.++.+.++|+++|+... .......+.||...
T Consensus 211 ~~~~~~~~~~~~l~~~Lk~~-------~~~g~~~~~~~~pg~~H~sv~-----~~~~~~~l~~lf~~ 265 (331)
T 3gff_A 211 GVSSYHKDLNLAFADKLTKL-------APKGLGFMAKYYPEETHQSVS-----HIGLYDGIRHLFKD 265 (331)
T ss_dssp EECCHHHHHHHHHHHHHHHH-------CCTTEEEEEEECTTCCTTTHH-----HHHHHHHHHHHHGG
T ss_pred chHHHHHHHHHHHHHHHHhc-------cCCCceEEEEECCCCCccccH-----HHHHHHHHHHHHhh
Confidence 78888899999999986 233678999999999998643 22334455565543
No 180
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.52 E-value=9.7e-14 Score=141.76 Aligned_cols=233 Identities=12% Similarity=0.012 Sum_probs=130.1
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCC-CccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccccc
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGF-NISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALA 536 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~ 536 (732)
..+| .++.+...-+ ...|+||++||.. +......|... ...|. ++|.|+++|+||.|..... .
T Consensus 13 ~~~g-~~l~y~~~g~------~g~p~vvllHG~~~~~~~~~~~~~~-~~~L~-~~~~vi~~D~~G~G~S~~~-------~ 76 (285)
T 1c4x_A 13 PSGT-LASHALVAGD------PQSPAVVLLHGAGPGAHAASNWRPI-IPDLA-ENFFVVAPDLIGFGQSEYP-------E 76 (285)
T ss_dssp CCTT-SCEEEEEESC------TTSCEEEEECCCSTTCCHHHHHGGG-HHHHH-TTSEEEEECCTTSTTSCCC-------S
T ss_pred EECC-EEEEEEecCC------CCCCEEEEEeCCCCCCcchhhHHHH-HHHHh-hCcEEEEecCCCCCCCCCC-------C
Confidence 4478 7887654311 1246799999974 22222234433 35566 5699999999998864321 1
Q ss_pred CCccHHHHH----HHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccc--------ccC
Q 004766 537 KKQNCFDDF----ISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY--------HKF 604 (732)
Q Consensus 537 ~~~~~~~D~----~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~--------~~~ 604 (732)
....+++++ .+.+..+++. ...+++.++|+|+||.+++.++.++|++++++|+..|....... ...
T Consensus 77 ~~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 154 (285)
T 1c4x_A 77 TYPGHIMSWVGMRVEQILGLMNH--FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAF 154 (285)
T ss_dssp SCCSSHHHHHHHHHHHHHHHHHH--HTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTG
T ss_pred CcccchhhhhhhHHHHHHHHHHH--hCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHH
Confidence 112345555 5444444433 12368999999999999999999999999999988775421100 000
Q ss_pred CCCCc------cccc-cCCCC----CHHH-------------HHHHHh-cCcccC-CCCCCCCCCCCCCCCCeEEEEeeC
Q 004766 605 TIGHA------WVSD-FGCSE----EEEE-------------FYWLIK-YSPLHN-VRRPWEQNPDKPFQYPSTLLLTAD 658 (732)
Q Consensus 605 ~~~~~------~~~~-~g~p~----~~~~-------------~~~~~~-~sp~~~-~~~~~~~~~~~~~~~~p~Li~~g~ 658 (732)
..... +... +.++. .++. ...+.. +.|... ....+........+..|+|+++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 234 (285)
T 1c4x_A 155 YADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGR 234 (285)
T ss_dssp GGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEET
T ss_pred hccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeC
Confidence 00000 0000 01111 1111 111100 000000 000000000001378899999999
Q ss_pred CCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 659 HDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 659 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
+|..||+..+.++++.+. ..++++++++||....... .+..+.+.+||.+
T Consensus 235 ~D~~~p~~~~~~~~~~~~--------------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 235 QDRIVPLDTSLYLTKHLK--------------HAELVVLDRCGHWAQLERW--DAMGPMLMEHFRA 284 (285)
T ss_dssp TCSSSCTHHHHHHHHHCS--------------SEEEEEESSCCSCHHHHSH--HHHHHHHHHHHHC
T ss_pred CCeeeCHHHHHHHHHhCC--------------CceEEEeCCCCcchhhcCH--HHHHHHHHHHHhc
Confidence 999999998887766543 3588999999998643222 2445567778753
No 181
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.52 E-value=3.6e-14 Score=155.01 Aligned_cols=116 Identities=11% Similarity=0.049 Sum_probs=77.4
Q ss_pred CccEEEEEcCCCCccCCCC-cChhHH--HHHHhcCcEEEEEcccCC--CCCchhHHhc--cc-----ccCCccHHHHHHH
Q 004766 480 SHPCLLYGYGGFNISVTPS-FSVSRT--ILMRHLGAVFCIANIRGG--GEYGEEWHKG--GA-----LAKKQNCFDDFIS 547 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~-~~~~~~--~~l~~~G~~v~~~~~rG~--g~~g~~~~~~--~~-----~~~~~~~~~D~~~ 547 (732)
..|+||++||..+...... |..... ..|..+||.|+++|.||+ |..+..-... +. ......+++|+.+
T Consensus 108 ~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a~ 187 (444)
T 2vat_A 108 RDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVR 187 (444)
T ss_dssp SCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHH
T ss_pred CCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccccccccccccccccHHHHHH
Confidence 3589999999987754311 332221 124348999999999994 4332110000 00 0011246777777
Q ss_pred HHHHHHHcCCCCCCc-EEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccc
Q 004766 548 ASEYLISAGYTQSRK-LCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 597 (732)
Q Consensus 548 ~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d 597 (732)
.+..+++. ...++ +.++|||+||++++.++.++|++++++|+..|...
T Consensus 188 dl~~ll~~--l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~ 236 (444)
T 2vat_A 188 IHRQVLDR--LGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCR 236 (444)
T ss_dssp HHHHHHHH--HTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSB
T ss_pred HHHHHHHh--cCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEecccc
Confidence 77766654 23457 99999999999999999999999999998887653
No 182
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.51 E-value=2.2e-13 Score=139.37 Aligned_cols=212 Identities=15% Similarity=0.045 Sum_probs=124.6
Q ss_pred cEEEEEcCCC-CccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 482 PCLLYGYGGF-NISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 482 P~vv~~hG~~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
|+||++||.. +......|.......|. ++|.|+++|+||.|..... .....+++++.+.+..+++. .+.
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~--l~~ 106 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVE-AGYRVILLDCPGWGKSDSV-------VNSGSRSDLNARILKSVVDQ--LDI 106 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHH-TTCEEEEECCTTSTTSCCC-------CCSSCHHHHHHHHHHHHHHH--TTC
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHh-cCCeEEEEcCCCCCCCCCC-------CccccCHHHHHHHHHHHHHH--hCC
Confidence 3899999964 22212234433325577 5699999999998864321 11135677777777766654 234
Q ss_pred CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc------------C--CCCC----ccccc-cCCC--CC
Q 004766 561 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK------------F--TIGH----AWVSD-FGCS--EE 619 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------------~--~~~~----~~~~~-~g~p--~~ 619 (732)
+++.++|+|+||.+++.++.++|++++++|+..|......... . .... .+... +.++ ..
T Consensus 107 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
T 1u2e_A 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLT 186 (289)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCC
T ss_pred CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCC
Confidence 6899999999999999999999999999998776542110000 0 0000 00000 0111 01
Q ss_pred HHH--------------HHHHH-hc--CcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCC
Q 004766 620 EEE--------------FYWLI-KY--SPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTS 682 (732)
Q Consensus 620 ~~~--------------~~~~~-~~--sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~ 682 (732)
++. +..+. .+ .+..... ..+....+..|+|+++|.+|..||+..+.++++.+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~----- 257 (289)
T 1u2e_A 187 DALFEARLNNMLSRRDHLENFVKSLEANPKQFPD----FGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAG----- 257 (289)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCC----CGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSTT-----
T ss_pred HHHHHHHHHHhhcChhHHHHHHHHHHhccccccc----hhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCCC-----
Confidence 111 11000 00 0100000 0001113789999999999999999998887766542
Q ss_pred CCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 683 LENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
.++++++++||....... .+..+.+.+||.
T Consensus 258 ---------~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 287 (289)
T 1u2e_A 258 ---------SELHIFRDCGHWAQWEHA--DAFNQLVLNFLA 287 (289)
T ss_dssp ---------CEEEEESSCCSCHHHHTH--HHHHHHHHHHHT
T ss_pred ---------cEEEEeCCCCCchhhcCH--HHHHHHHHHHhc
Confidence 478889999998543222 234455667764
No 183
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.51 E-value=9.7e-14 Score=142.56 Aligned_cols=120 Identities=11% Similarity=-0.021 Sum_probs=86.8
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccC
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 537 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 537 (732)
..+| .++.+... +..|+||++||..+... .|.. +...|. .||.|+++|.||.|.....-.. ...
T Consensus 19 ~~~g-~~l~~~~~--------g~~~~vv~lHG~~~~~~--~~~~-~~~~l~-~~~~v~~~D~~G~G~S~~~~~~---~~~ 82 (306)
T 3r40_A 19 NTSS-GRIFARVG--------GDGPPLLLLHGFPQTHV--MWHR-VAPKLA-ERFKVIVADLPGYGWSDMPESD---EQH 82 (306)
T ss_dssp CCTT-CCEEEEEE--------ECSSEEEEECCTTCCGG--GGGG-THHHHH-TTSEEEEECCTTSTTSCCCCCC---TTC
T ss_pred EeCC-EEEEEEEc--------CCCCeEEEECCCCCCHH--HHHH-HHHHhc-cCCeEEEeCCCCCCCCCCCCCC---ccc
Confidence 4478 88877653 24579999999987643 3443 356677 5999999999998864321100 000
Q ss_pred CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 538 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
...+++++.+.+..+++. ...+++.++|+|+||.++..++.++|++++++|+..|.
T Consensus 83 ~~~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 138 (306)
T 3r40_A 83 TPYTKRAMAKQLIEAMEQ--LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDIL 138 (306)
T ss_dssp GGGSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCC
Confidence 134567777776666655 34468999999999999999999999999999998864
No 184
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.50 E-value=5.9e-14 Score=143.58 Aligned_cols=121 Identities=11% Similarity=0.013 Sum_probs=85.0
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccC
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 537 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 537 (732)
..+| .++.+... ++.|+||++||..+.... |... ...|+ .+|.|+++|+||.|.....- ....
T Consensus 14 ~~~g-~~l~~~~~--------g~~~~vv~lHG~~~~~~~--~~~~-~~~l~-~~~~vi~~D~~G~G~S~~~~----~~~~ 76 (297)
T 2qvb_A 14 EIAG-KRMAYIDE--------GKGDAIVFQHGNPTSSYL--WRNI-MPHLE-GLGRLVACDLIGMGASDKLS----PSGP 76 (297)
T ss_dssp EETT-EEEEEEEE--------SSSSEEEEECCTTCCGGG--GTTT-GGGGT-TSSEEEEECCTTSTTSCCCS----SCST
T ss_pred EECC-EEEEEEec--------CCCCeEEEECCCCchHHH--HHHH-HHHHh-hcCeEEEEcCCCCCCCCCCC----Cccc
Confidence 3478 88876544 235899999998876532 4332 34466 56999999999988643210 0001
Q ss_pred CccHHHHHHHHHHHHHHcCCCCC-CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccc
Q 004766 538 KQNCFDDFISASEYLISAGYTQS-RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 597 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~~~d~-~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d 597 (732)
...+++++.+.+..+++. .+. +++.++|+|+||.+++.++.++|++++++|+..|...
T Consensus 77 ~~~~~~~~~~~~~~~l~~--~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 135 (297)
T 2qvb_A 77 DRYSYGEQRDFLFALWDA--LDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVT 135 (297)
T ss_dssp TSSCHHHHHHHHHHHHHH--TTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCS
T ss_pred cCcCHHHHHHHHHHHHHH--cCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccC
Confidence 114566666666665554 234 6899999999999999999999999999998887653
No 185
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.50 E-value=7.5e-14 Score=145.95 Aligned_cols=212 Identities=13% Similarity=0.043 Sum_probs=124.7
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
.|+||++||..+... .| ..++...||.|+++|.||.|.... ......+++++.+.+..+++. .+.
T Consensus 81 ~~~vv~~hG~~~~~~--~~----~~~~~~lg~~Vi~~D~~G~G~S~~-------~~~~~~~~~~~a~dl~~~l~~--l~~ 145 (330)
T 3p2m_A 81 APRVIFLHGGGQNAH--TW----DTVIVGLGEPALAVDLPGHGHSAW-------REDGNYSPQLNSETLAPVLRE--LAP 145 (330)
T ss_dssp CCSEEEECCTTCCGG--GG----HHHHHHSCCCEEEECCTTSTTSCC-------CSSCBCCHHHHHHHHHHHHHH--SST
T ss_pred CCeEEEECCCCCccc--hH----HHHHHHcCCeEEEEcCCCCCCCCC-------CCCCCCCHHHHHHHHHHHHHH--hCC
Confidence 578999999876532 23 334444699999999999875421 112344566777666666654 345
Q ss_pred CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccccccc-----------CC-CCCccc--c----cc--CCC-CC
Q 004766 561 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK-----------FT-IGHAWV--S----DF--GCS-EE 619 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~-----------~~-~~~~~~--~----~~--g~p-~~ 619 (732)
+++.++|+|+||++++.++.++|++++++|+..|......... .. ....+. . .+ ..+ ..
T Consensus 146 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (330)
T 3p2m_A 146 GAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRD 225 (330)
T ss_dssp TCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHHHHHHHHHHHCTTSC
T ss_pred CCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHHHHHhcCCCCC
Confidence 7899999999999999999999999999999887544211100 00 000000 0 00 001 11
Q ss_pred HHHHHHHHhcCcccC--------CCCCCCCC------CCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCC
Q 004766 620 EEEFYWLIKYSPLHN--------VRRPWEQN------PDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLEN 685 (732)
Q Consensus 620 ~~~~~~~~~~sp~~~--------~~~~~~~~------~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 685 (732)
...+........... ........ +....+..|+|+++|.+|..||+..+.++.+.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~~~-------- 297 (330)
T 3p2m_A 226 VKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATH-------- 297 (330)
T ss_dssp HHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHCSS--------
T ss_pred HHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--------
Confidence 111111110000000 00000000 00012678999999999999999888777765532
Q ss_pred CCCCCCEE-EEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 686 SPQTNPII-GRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 686 ~~~~~~~~-~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
.. +++++++||....... .+....+.+||.
T Consensus 298 ------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 328 (330)
T 3p2m_A 298 ------FRGVHIVEKSGHSVQSDQP--RALIEIVRGVLD 328 (330)
T ss_dssp ------EEEEEEETTCCSCHHHHCH--HHHHHHHHHHTT
T ss_pred ------CeeEEEeCCCCCCcchhCH--HHHHHHHHHHHh
Confidence 46 8999999998643222 244455667764
No 186
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.50 E-value=2.5e-13 Score=143.60 Aligned_cols=123 Identities=13% Similarity=0.072 Sum_probs=85.9
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccC
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 537 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 537 (732)
..+| .++.+...-|++ +..|+||++||..+... .|... ...|.++||.|+++|+||.|..... ...
T Consensus 9 ~~~g-~~l~y~~~G~~~----~~~~~vv~~hG~~~~~~--~~~~~-~~~l~~~g~~vi~~d~~g~g~s~~~------~~~ 74 (356)
T 2e3j_A 9 NCRG-TRIHAVADSPPD----QQGPLVVLLHGFPESWY--SWRHQ-IPALAGAGYRVVAIDQRGYGRSSKY------RVQ 74 (356)
T ss_dssp EETT-EEEEEEEECCTT----CCSCEEEEECCTTCCGG--GGTTT-HHHHHHTTCEEEEECCTTSTTSCCC------CSG
T ss_pred ccCC-eEEEEEEecCCC----CCCCEEEEECCCCCcHH--HHHHH-HHHHHHcCCEEEEEcCCCCCCCCCC------Ccc
Confidence 3478 899888765542 35689999999877643 34433 3445548999999999998754221 000
Q ss_pred CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 538 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
...+++++.+.+..+++. .+.+++.++|+|+||.+++.++.++|++++++|+..+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 75 KAYRIKELVGDVVGVLDS--YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp GGGSHHHHHHHHHHHHHH--TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred cccCHHHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 122455555555544443 345689999999999999999999999999998876543
No 187
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.49 E-value=3.1e-13 Score=141.37 Aligned_cols=116 Identities=13% Similarity=0.086 Sum_probs=81.5
Q ss_pred eEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEc----ccCCCCCchhHHhcccccCCc
Q 004766 464 KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIAN----IRGGGEYGEEWHKGGALAKKQ 539 (732)
Q Consensus 464 ~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~----~rG~g~~g~~~~~~~~~~~~~ 539 (732)
.+.+..+.|. .+..|+||++||..+......+...+...|+ +||.|+.+| +||.|.... .
T Consensus 25 ~~~y~~~g~~----~~~~~~vvllHG~~~~~~~~~~~~~l~~~L~-~g~~Vi~~Dl~~D~~G~G~S~~-----------~ 88 (335)
T 2q0x_A 25 YCKIPVFMMN----MDARRCVLWVGGQTESLLSFDYFTNLAEELQ-GDWAFVQVEVPSGKIGSGPQDH-----------A 88 (335)
T ss_dssp TEEEEEEEEC----TTSSSEEEEECCTTCCTTCSTTHHHHHHHHT-TTCEEEEECCGGGBTTSCSCCH-----------H
T ss_pred ceeEEEeccC----CCCCcEEEEECCCCccccchhHHHHHHHHHH-CCcEEEEEeccCCCCCCCCccc-----------c
Confidence 5555544431 1345889999997654333333233445565 899999995 578765421 1
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHh--hCCCeeeEEEEcCCccc
Q 004766 540 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACIN--QRPDLFGCALAHVGVMD 597 (732)
Q Consensus 540 ~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~--~~p~~f~a~v~~~p~~d 597 (732)
...+|+.+++++|.+. .+.+++.++|+||||++++.++. .+|++++++|+..|+.+
T Consensus 89 ~~~~d~~~~~~~l~~~--l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 89 HDAEDVDDLIGILLRD--HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCD 146 (335)
T ss_dssp HHHHHHHHHHHHHHHH--SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCC
T ss_pred CcHHHHHHHHHHHHHH--cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCccc
Confidence 2457888888888774 34579999999999999999988 47999999998877643
No 188
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.49 E-value=3.2e-13 Score=140.95 Aligned_cols=120 Identities=15% Similarity=0.146 Sum_probs=80.4
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccC
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 537 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 537 (732)
..+| .++.+... +..|.||++||.++... .|... ...|.++||.|+++|.||.|.....-. ...
T Consensus 17 ~~~g-~~l~y~~~--------G~g~~vvllHG~~~~~~--~w~~~-~~~L~~~g~~via~Dl~G~G~S~~~~~----~~~ 80 (328)
T 2cjp_A 17 AVNG-LNMHLAEL--------GEGPTILFIHGFPELWY--SWRHQ-MVYLAERGYRAVAPDLRGYGDTTGAPL----NDP 80 (328)
T ss_dssp EETT-EEEEEEEE--------CSSSEEEEECCTTCCGG--GGHHH-HHHHHTTTCEEEEECCTTSTTCBCCCT----TCG
T ss_pred cCCC-cEEEEEEc--------CCCCEEEEECCCCCchH--HHHHH-HHHHHHCCcEEEEECCCCCCCCCCcCc----CCc
Confidence 3478 88776543 23479999999877542 44433 345655899999999999886532100 001
Q ss_pred CccHHHHHHHHHHHHHHc-CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 538 KQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
...+++++.+.+..+++. +. +.+++.++|+|+||+++..++.++|++++++|+..+
T Consensus 81 ~~~~~~~~a~dl~~~l~~l~~-~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~ 137 (328)
T 2cjp_A 81 SKFSILHLVGDVVALLEAIAP-NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSV 137 (328)
T ss_dssp GGGSHHHHHHHHHHHHHHHCT-TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred ccccHHHHHHHHHHHHHHhcC-CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEcc
Confidence 122344444444443332 21 246899999999999999999999999999988653
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.48 E-value=3e-12 Score=148.06 Aligned_cols=254 Identities=11% Similarity=-0.019 Sum_probs=162.2
Q ss_pred EECCCCcEEEEEEeccCCceEEEEEEECCCCce--ecccc-----cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 138 SVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV--EADAL-----SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 138 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~--~~~~~-----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
.++|||++++|+...+|.+...||+++..+|+. +.+.. ......+++|||||+.|+|+....
T Consensus 74 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~----------- 142 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPN----------- 142 (695)
T ss_dssp CCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEET-----------
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCC-----------
Confidence 356999999999988887778899999877763 22111 111357899999999999997653
Q ss_pred cccCCcccEEEEEECCCCCCC-CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCC--------cceEEEEEEeCCCCCC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSE-DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENC--------DPVNKVYYCDLSALPE 281 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~-~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~--------~~~~~l~~~d~~~~~~ 281 (732)
......|+++++.++... .. . .+. ..+ .+++|||||+.|++.+.+.. ....+||++++.++..
T Consensus 143 ---G~~~~~i~v~dl~tg~~~~~~-~--~~~-~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~ 214 (695)
T 2bkl_A 143 ---AADEAVLHVIDVDSGEWSKVD-V--IEG-GKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS 214 (695)
T ss_dssp ---TCSCCEEEEEETTTCCBCSSC-C--BSC-CTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG
T ss_pred ---CCceEEEEEEECCCCCCcCCc-c--cCc-ccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch
Confidence 223468999999887532 11 0 111 111 47899999999999886543 2356799999987431
Q ss_pred CcccccccCCCCCcEEeeeccc----ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEE
Q 004766 282 GLEGFKKRDGLLPFVKLIDGFD----AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATA 357 (732)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~----~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~ 357 (732)
. .+.+....+ .....|||||+.|++.++.......|+.++..++. ++.|..+.. .. ....+
T Consensus 215 ~------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~-~~-~~~~~ 279 (695)
T 2bkl_A 215 K------------DTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVG-AK-YEVHA 279 (695)
T ss_dssp G------------CEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSS-CC-EEEEE
T ss_pred h------------ceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCC-ce-EEEEe
Confidence 1 112222111 11235999999999887654245689999876655 677776552 22 33344
Q ss_pred ecCCEEEEEEecC-CeeEEEEEeCCCCce--eeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 358 VNLNQMIVSYLSD-VKYVLQIRDLKNGSL--LHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 358 ~~~~~l~~~~~~~-g~~~l~~~d~~~g~~--~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.+++ +++....+ ...+|+++|+++++. .+.+..+ ...+..++++ ++.+++++..- .-.+++.+++.++
T Consensus 280 ~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~d-g~~~l~~~~~~g~ 352 (695)
T 2bkl_A 280 WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKD-ATSEVRVATLKGK 352 (695)
T ss_dssp ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEET-TEEEEEEEETTCC
T ss_pred cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEEC-CEEEEEEEeCCCC
Confidence 4434 76666544 357899999986652 2344322 3345556655 45677666543 3467888887543
No 190
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.48 E-value=4.4e-12 Score=134.08 Aligned_cols=255 Identities=13% Similarity=0.029 Sum_probs=154.2
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCc-eEEEEEEECCCCceeccc-----ccceeeeeEEEEeCCcEEEEEEecCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSD-WATIKLMRIEDQIVEADA-----LSWFKFSSIAWTHDSKGFFYSRYPAPKEG 203 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e-~~~i~v~dl~~g~~~~~~-----~~~~~~~~~~WspDg~~l~y~~~~~~~~~ 203 (732)
+...+..++|||||++||-..+....- ...|++|+..++...... .....+..++|+||++.| .+..+
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~d----- 114 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDS----- 114 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETT-----
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECC-----
Confidence 445688999999999998765432211 257999999887643211 111124789999998644 44322
Q ss_pred CCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCc
Q 004766 204 KDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGL 283 (732)
Q Consensus 204 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 283 (732)
..|.+|++.++.......+....+...+..++|||||++|+..+.++ .|.++|+.++.
T Consensus 115 --------------g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-----~v~iwd~~~~~--- 172 (357)
T 4g56_B 115 --------------GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-----SVKVWDLSQKA--- 172 (357)
T ss_dssp --------------SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTTE---
T ss_pred --------------CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCc---
Confidence 24788888765432222222222344567899999999997665433 37788987642
Q ss_pred ccccccCCCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-C
Q 004766 284 EGFKKRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-N 361 (732)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~ 361 (732)
....+........ ..|+++++.+++....+ ..|..+|+.+++....+........+..+.++++ +
T Consensus 173 ----------~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~d---g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 239 (357)
T 4g56_B 173 ----------VLKSYNAHSSEVNCVAACPGKDTIFLSCGED---GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKD 239 (357)
T ss_dssp ----------EEEEECCCSSCEEEEEECTTCSSCEEEEETT---SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTST
T ss_pred ----------EEEEEcCCCCCEEEEEEccCCCceeeeeccC---CceEEEECCCCceeeeeeeccccccccchhhhhccc
Confidence 1222222222222 24788887655544433 4688889887763332222222355778888874 5
Q ss_pred EEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 362 QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 362 ~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.+++....++ .|++||+.+++.++.+..+...|..+.+++++..++++.+.. ..++.+|+.+++
T Consensus 240 ~~la~g~~d~--~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D---~~i~iwd~~~~~ 303 (357)
T 4g56_B 240 DTFACGDETG--NVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISED---CTVAVLDADFSE 303 (357)
T ss_dssp TEEEEEESSS--CEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT---SCEEEECTTSCE
T ss_pred ceEEEeeccc--ceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC---CEEEEEECCCCc
Confidence 6777777664 688999988877667766667788889999987666655442 468899988774
No 191
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.48 E-value=1.5e-13 Score=141.02 Aligned_cols=122 Identities=9% Similarity=-0.006 Sum_probs=86.0
Q ss_pred EccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccccc
Q 004766 457 PSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALA 536 (732)
Q Consensus 457 ~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~ 536 (732)
...+| .++.+... ++.|+||++||..+... .|... ...|+ .+|.|+++|+||.|.....- ...
T Consensus 14 ~~~~g-~~l~~~~~--------g~~~~vv~lHG~~~~~~--~~~~~-~~~L~-~~~~vi~~D~~G~G~S~~~~----~~~ 76 (302)
T 1mj5_A 14 IEIKG-RRMAYIDE--------GTGDPILFQHGNPTSSY--LWRNI-MPHCA-GLGRLIACDLIGMGDSDKLD----PSG 76 (302)
T ss_dssp EEETT-EEEEEEEE--------SCSSEEEEECCTTCCGG--GGTTT-GGGGT-TSSEEEEECCTTSTTSCCCS----SCS
T ss_pred EEECC-EEEEEEEc--------CCCCEEEEECCCCCchh--hhHHH-HHHhc-cCCeEEEEcCCCCCCCCCCC----CCC
Confidence 34588 88876543 23589999999887643 33332 34466 56899999999987643210 001
Q ss_pred CCccHHHHHHHHHHHHHHcCCCCC-CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccc
Q 004766 537 KKQNCFDDFISASEYLISAGYTQS-RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 597 (732)
Q Consensus 537 ~~~~~~~D~~~~~~~l~~~~~~d~-~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d 597 (732)
....+++++.+.+..+++. .+. +++.++|+|+||.+++.++.++|++++++|+..|...
T Consensus 77 ~~~~~~~~~~~~~~~~l~~--l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 136 (302)
T 1mj5_A 77 PERYAYAEHRDYLDALWEA--LDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAM 136 (302)
T ss_dssp TTSSCHHHHHHHHHHHHHH--TTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCS
T ss_pred cccccHHHHHHHHHHHHHH--hCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCC
Confidence 1124567777776666654 234 7899999999999999999999999999998887653
No 192
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.48 E-value=1.1e-13 Score=146.00 Aligned_cols=114 Identities=11% Similarity=0.054 Sum_probs=79.5
Q ss_pred CCccEEEEEcCCCCccCCC---CcC----------hhHHHHHHhcCcEEEEEcccCCCCCchhHHh-cccc-cCC-ccHH
Q 004766 479 GSHPCLLYGYGGFNISVTP---SFS----------VSRTILMRHLGAVFCIANIRGGGEYGEEWHK-GGAL-AKK-QNCF 542 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~---~~~----------~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~-~~~~-~~~-~~~~ 542 (732)
++.|+||++||+.+..... .|. ..+...|.++||.|+++|+||.|.....-.. .+.. ... ....
T Consensus 48 ~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 127 (354)
T 2rau_A 48 GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWI 127 (354)
T ss_dssp CCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHH
T ss_pred CCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHH
Confidence 4678999999987764311 122 1344556658999999999998764321100 0000 111 2235
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC-CCeeeEEEEcCC
Q 004766 543 DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVG 594 (732)
Q Consensus 543 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~~f~a~v~~~p 594 (732)
+|+.++++++.++ .+.+++.++|+|+||++++.++.++ |++++++|+..+
T Consensus 128 ~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~ 178 (354)
T 2rau_A 128 SDIKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDG 178 (354)
T ss_dssp HHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESC
T ss_pred HHHHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecc
Confidence 7888888888765 3457999999999999999999998 999999998844
No 193
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.48 E-value=2.6e-11 Score=127.36 Aligned_cols=249 Identities=8% Similarity=0.009 Sum_probs=157.9
Q ss_pred EEeEEECCCCcEEEEEEeccCC---ceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGS---DWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~---e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
...+.+||||++|+++.. .+. ....|+++|+++++.+..........+++|+|||+.++++..
T Consensus 43 ~~~~~~s~dg~~l~~~~~-~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~------------- 108 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATS-QSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNT------------- 108 (353)
T ss_dssp EEEEEEETTTTEEEEEEC-CCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEET-------------
T ss_pred ccceEECCCCCEEEEEcC-CCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEec-------------
Confidence 347889999999965543 321 246899999999986543222223468999999998887742
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCC-------CeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCc
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEH-------PKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGL 283 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~-------~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 283 (732)
....|+.+++.++... ..+..... +.....+.+||||+++++..... ...|+++|+.++.
T Consensus 109 -----~~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~---~~~i~~~d~~~~~--- 175 (353)
T 3vgz_A 109 -----VNSAVTAIDAKTGEVK--GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK---ESVIWVVDGGNIK--- 175 (353)
T ss_dssp -----TTTEEEEEETTTCCEE--EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS---SCEEEEEETTTTE---
T ss_pred -----CCCEEEEEeCCCCeeE--EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC---CceEEEEcCCCCc---
Confidence 2347888998776432 12222111 11245789999999987765322 3569999988742
Q ss_pred ccccccCCCCCcEEee-ecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEecc-C-CCCCceeEEEEecC
Q 004766 284 EGFKKRDGLLPFVKLI-DGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIP-E-AERDVLESATAVNL 360 (732)
Q Consensus 284 ~~~~~~~~~~~~~~l~-~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~l~~~~~~~~ 360 (732)
....+. .+.......|+|||+.+|+... ...|+.+|+.+++....+.. . .......++.++++
T Consensus 176 ----------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 241 (353)
T 3vgz_A 176 ----------LKTAIQNTGKMSTGLALDSEGKRLYTTNA----DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTA 241 (353)
T ss_dssp ----------EEEEECCCCTTCCCCEEETTTTEEEEECT----TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETT
T ss_pred ----------eEEEecCCCCccceEEECCCCCEEEEEcC----CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCC
Confidence 111221 1111222358999998887543 34789999988762222221 1 12344667888875
Q ss_pred C-EEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 361 N-QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 361 ~-~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+ .+++....+ ..|++||+.+++.+..+..+.. ..+.++++++.++++... ...++.+|+.+++
T Consensus 242 g~~l~~~~~~~--~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~---~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 242 RQRAFITDSKA--AEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQ---AGKVSVIDAKSYK 305 (353)
T ss_dssp TTEEEEEESSS--SEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETT---TTEEEEEETTTTE
T ss_pred CCEEEEEeCCC--CEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECC---CCeEEEEECCCCe
Confidence 4 466554333 5899999988887666665432 346678999987765432 3689999998774
No 194
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.48 E-value=2.5e-13 Score=137.44 Aligned_cols=105 Identities=11% Similarity=0.064 Sum_probs=77.3
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
|+.|.||++||..+... .|.. ....|. .+|.|+++|.||.|..... .....+++++.+.+..+++. .
T Consensus 14 G~g~~vvllHG~~~~~~--~~~~-~~~~L~-~~~~vi~~Dl~G~G~S~~~-------~~~~~~~~~~~~dl~~~l~~--l 80 (269)
T 2xmz_A 14 ETNQVLVFLHGFLSDSR--TYHN-HIEKFT-DNYHVITIDLPGHGEDQSS-------MDETWNFDYITTLLDRILDK--Y 80 (269)
T ss_dssp CCSEEEEEECCTTCCGG--GGTT-THHHHH-TTSEEEEECCTTSTTCCCC-------TTSCCCHHHHHHHHHHHHGG--G
T ss_pred CCCCeEEEEcCCCCcHH--HHHH-HHHHHh-hcCeEEEecCCCCCCCCCC-------CCCccCHHHHHHHHHHHHHH--c
Confidence 34457999999887654 3443 345567 5699999999998864321 01134667777766666655 2
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
..+++.++|+|+||.++..++.++|++++++|+..|..
T Consensus 81 ~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 118 (269)
T 2xmz_A 81 KDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSP 118 (269)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCS
T ss_pred CCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCc
Confidence 34689999999999999999999999999999887643
No 195
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.48 E-value=1.2e-11 Score=128.56 Aligned_cols=238 Identities=14% Similarity=0.061 Sum_probs=157.1
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...+..+.++|+++.++-.. ...+|++||+++++.+... ........++|+|||+.|+....
T Consensus 80 ~~~v~~~~~~~~~~~l~s~s-----~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~------------ 142 (321)
T 3ow8_A 80 QLGVVSVDISHTLPIAASSS-----LDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTH------------ 142 (321)
T ss_dssp SSCEEEEEECSSSSEEEEEE-----TTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECT------------
T ss_pred CCCEEEEEECCCCCEEEEEe-----CCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcC------------
Confidence 34577889999999877442 2248999999999855321 11122367999999999887642
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
...|.+|++.++.. ...+.. .......++|||||++|+....++ .|.++|+.++.
T Consensus 143 -------dg~v~i~~~~~~~~--~~~~~~--~~~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~~--------- 197 (321)
T 3ow8_A 143 -------VGKVNIFGVESGKK--EYSLDT--RGKFILSIAYSPDGKYLASGAIDG-----IINIFDIATGK--------- 197 (321)
T ss_dssp -------TSEEEEEETTTCSE--EEEEEC--SSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTE---------
T ss_pred -------CCcEEEEEcCCCce--eEEecC--CCceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCc---------
Confidence 33688889876542 222222 234567899999999998766443 38888987642
Q ss_pred CCCCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 290 DGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 290 ~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
....+..... .....|+|+|+.|+..+. ...|..+|+.++.....+..+. ..+..+.+++++..+++..
T Consensus 198 ----~~~~~~~h~~~v~~l~~spd~~~l~s~s~----dg~i~iwd~~~~~~~~~~~~h~--~~v~~~~~sp~~~~l~s~s 267 (321)
T 3ow8_A 198 ----LLHTLEGHAMPIRSLTFSPDSQLLVTASD----DGYIKIYDVQHANLAGTLSGHA--SWVLNVAFCPDDTHFVSSS 267 (321)
T ss_dssp ----EEEEECCCSSCCCEEEECTTSCEEEEECT----TSCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEE
T ss_pred ----EEEEEcccCCceeEEEEcCCCCEEEEEcC----CCeEEEEECCCcceeEEEcCCC--CceEEEEECCCCCEEEEEe
Confidence 1222222111 122358999887665433 3458888988776344444443 5678899998777777877
Q ss_pred cCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEEC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNL 426 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~ 426 (732)
.++ .|.+||+.+++.+..+..+.+.|..+.++++++.++ +.+. -..+..||.
T Consensus 268 ~D~--~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~-s~~~---d~~i~vwd~ 319 (321)
T 3ow8_A 268 SDK--SVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIV-SVGD---DQEIHIYDC 319 (321)
T ss_dssp TTS--CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEET---TCCEEEEEC
T ss_pred CCC--cEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-EEeC---CCeEEEEeC
Confidence 774 688999988877666665567788889999988654 3332 234555553
No 196
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.48 E-value=5e-12 Score=145.45 Aligned_cols=262 Identities=10% Similarity=-0.027 Sum_probs=159.4
Q ss_pred EEEeEEECCCCcEEEEEEecc-CCceEEEEEEECCCCceecccccceeee---------eEEEE--eCCcE-EEEEEecC
Q 004766 133 ALIKVSVSEDAKYLAYALSYS-GSDWATIKLMRIEDQIVEADALSWFKFS---------SIAWT--HDSKG-FFYSRYPA 199 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~-G~e~~~i~v~dl~~g~~~~~~~~~~~~~---------~~~Ws--pDg~~-l~y~~~~~ 199 (732)
.+..+++|+| +++|+..+. ......||++ ..+|+....+....... .+.|+ |||+. |+|+..
T Consensus 25 ~~~~~~~s~~--~~~~~~~~~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~-- 99 (662)
T 3azo_A 25 RPACVGAVGD--EVWWVAPRPAEAGRATLVRR-RADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF-- 99 (662)
T ss_dssp CCEEEEEETT--EEEEEEEETTTTTEEEEEEE-CTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT--
T ss_pred ccceeEEcCC--eEEEEecCcccCCcEEEEEE-CCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC--
Confidence 3568889865 688887632 2234677776 45565433222211112 56787 99999 998742
Q ss_pred CCCCCCCCCCCcccCCcccEEEEEECC--C-CCCCCeEEEecCC--CCeeEEEeEEecCCcEEEEEEecCC-----cceE
Q 004766 200 PKEGKDMDAGTETDSNLYHEFYYHFLG--T-KQSEDILCWKDPE--HPKYIFSGHVTEDGQYLVMCIEENC-----DPVN 269 (732)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~v~~~~lg--t-~~~~~~~v~~~~~--~~~~~~~~~~SpDg~~l~~~~~~~~-----~~~~ 269 (732)
...+||.++++ + +.. ..+...+. .......++|||||++|++.+.+.. ....
T Consensus 100 ----------------~~~~l~~~~~~~~g~~~~--~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~ 161 (662)
T 3azo_A 100 ----------------GDQRLYAFEPDAPGGAVP--RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRR 161 (662)
T ss_dssp ----------------TTCCEEEECTTSTTCCCC--EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEE
T ss_pred ----------------CCCeEEEEcCCCCCCCCC--EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCcee
Confidence 13469999986 3 332 22222110 2334568999999999999876521 2247
Q ss_pred EEEEEeCCCCCCCcccccccCCCCCcEEee-ecccc-eEEEEEecCCeEEEEeCCCC----CCceEEEEeCC-CCC--Cc
Q 004766 270 KVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFDA-QYEVIANDDTVFTFLTNKDA----PKYKIIRVDLK-EPN--DW 340 (732)
Q Consensus 270 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~-~~~~~s~dg~~l~~~s~~~~----~~~~l~~~d~~-~~~--~~ 340 (732)
+||++++.+++.. .....+.++ .+... ....|||||+.|++.+.... ....|+++|++ ++. ..
T Consensus 162 ~i~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~ 233 (662)
T 3azo_A 162 FLAAVPLDGSAAA--------DRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADT 233 (662)
T ss_dssp EEEEEETTSTTTT--------CGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEE
T ss_pred EEEEEECCCCccc--------cCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccccc
Confidence 8999999872000 000133444 32211 12359999999998875431 23589999998 451 24
Q ss_pred eEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccce---------eeEeecccCCcEEEEE
Q 004766 341 FEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGS---------VNAISARREDSVVFIS 411 (732)
Q Consensus 341 ~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~---------v~~~~~s~d~~~l~~~ 411 (732)
+.+.... ...+..+.|++|+.+++....++..+|+++++++|+. +.+...... +..+.+++++. ++++
T Consensus 234 ~~l~~~~-~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~ 310 (662)
T 3azo_A 234 RTLLGGP-EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA-TQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVV 310 (662)
T ss_dssp EEEEEET-TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE-EESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEE
T ss_pred EEeCCCC-CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCce-eecccccccccCccccccCceEeEeCCCE-EEEE
Confidence 5555432 2456788999877788888888777999999876765 444422111 22344556665 5555
Q ss_pred EecCCCCceEEEEECCCCC
Q 004766 412 FTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 412 ~ss~~~p~~~y~~d~~~~~ 430 (732)
.+. .-..+|.+|+.+++
T Consensus 311 ~~~--~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 311 HGK--GAAVLGILDPESGE 327 (662)
T ss_dssp EBS--SSCEEEEEETTTTE
T ss_pred EEc--CccEEEEEECCCCc
Confidence 554 55789999987763
No 197
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.47 E-value=2.2e-13 Score=139.73 Aligned_cols=115 Identities=9% Similarity=-0.043 Sum_probs=84.5
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccC
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 537 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 537 (732)
..+| .++.+...- ..|+||++||..+... .|... ...|.++ |.|+++|.||.|..... .
T Consensus 16 ~~~g-~~l~~~~~g--------~~~~vv~lHG~~~~~~--~~~~~-~~~L~~~-~~vi~~D~~G~G~S~~~--------~ 74 (301)
T 3kda_A 16 EVDG-VKLHYVKGG--------QGPLVMLVHGFGQTWY--EWHQL-MPELAKR-FTVIAPDLPGLGQSEPP--------K 74 (301)
T ss_dssp EETT-EEEEEEEEE--------SSSEEEEECCTTCCGG--GGTTT-HHHHTTT-SEEEEECCTTSTTCCCC--------S
T ss_pred eeCC-eEEEEEEcC--------CCCEEEEECCCCcchh--HHHHH-HHHHHhc-CeEEEEcCCCCCCCCCC--------C
Confidence 3488 888876542 4579999999987653 34443 4556645 99999999998865332 2
Q ss_pred CccHHHHHHHHHHHHHHcCCCCCCc-EEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 538 KQNCFDDFISASEYLISAGYTQSRK-LCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
...+++++.+.+..+++. ...++ +.++|+|+||.++..++.++|++++++|+..|.
T Consensus 75 ~~~~~~~~~~~l~~~l~~--l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 131 (301)
T 3kda_A 75 TGYSGEQVAVYLHKLARQ--FSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAP 131 (301)
T ss_dssp SCSSHHHHHHHHHHHHHH--HCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSC
T ss_pred CCccHHHHHHHHHHHHHH--cCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccC
Confidence 234566666666655544 23457 999999999999999999999999999988875
No 198
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.47 E-value=5e-13 Score=134.03 Aligned_cols=204 Identities=16% Similarity=0.055 Sum_probs=119.8
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCC
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 559 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 559 (732)
..|.||++||..+... .|.. ....|+ ..|.|+++|.||.|..... ...+++++.+.+..+++. ..
T Consensus 15 ~~~~vvllHG~~~~~~--~w~~-~~~~L~-~~~~via~Dl~G~G~S~~~---------~~~~~~~~a~dl~~~l~~--l~ 79 (255)
T 3bf7_A 15 NNSPIVLVHGLFGSLD--NLGV-LARDLV-NDHNIIQVDVRNHGLSPRE---------PVMNYPAMAQDLVDTLDA--LQ 79 (255)
T ss_dssp CCCCEEEECCTTCCTT--TTHH-HHHHHT-TTSCEEEECCTTSTTSCCC---------SCCCHHHHHHHHHHHHHH--HT
T ss_pred CCCCEEEEcCCcccHh--HHHH-HHHHHH-hhCcEEEecCCCCCCCCCC---------CCcCHHHHHHHHHHHHHH--cC
Confidence 4578999999877643 3443 345566 5599999999998864321 122444544444433332 12
Q ss_pred CCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcC--Ccccccc-c------c---cC-CCCCcc-ccc-cCC-CCCHHHH
Q 004766 560 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHV--GVMDMLR-Y------H---KF-TIGHAW-VSD-FGC-SEEEEEF 623 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~--p~~d~~~-~------~---~~-~~~~~~-~~~-~g~-p~~~~~~ 623 (732)
.+++.++|+|+||.+++.++.++|++++++|+.. |...... . . .. ...... ..+ +.. ..++...
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (255)
T 3bf7_A 80 IDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVI 159 (255)
T ss_dssp CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCHHHH
T ss_pred CCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchhHHH
Confidence 3589999999999999999999999999998753 3211100 0 0 00 000000 000 000 0111111
Q ss_pred HHHHh--------------------cCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCC
Q 004766 624 YWLIK--------------------YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSL 683 (732)
Q Consensus 624 ~~~~~--------------------~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~ 683 (732)
..+.. ......+. .+..|+|+++|.+|..+++.++.++.+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~------- 222 (255)
T 3bf7_A 160 QFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIP----------AWDHPALFIPGGNSPYVSEQYRDDLLAQFP------- 222 (255)
T ss_dssp HHHHTTEETTEESSCHHHHHHTHHHHHCCCCCC----------CCCSCEEEECBTTCSTTCGGGHHHHHHHCT-------
T ss_pred HHHHHhccCCceeecHHHHHhhhhhcccccccc----------ccCCCeEEEECCCCCCCCHHHHHHHHHHCC-------
Confidence 11110 00001111 378999999999999999988776655432
Q ss_pred CCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 684 ENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
..++++++++||....... ....+.+.+||.+
T Consensus 223 -------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 223 -------QARAHVIAGAGHWVHAEKP--DAVLRAIRRYLND 254 (255)
T ss_dssp -------TEEECCBTTCCSCHHHHCH--HHHHHHHHHHHHT
T ss_pred -------CCeEEEeCCCCCccccCCH--HHHHHHHHHHHhc
Confidence 2688999999998643322 2445567788864
No 199
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.47 E-value=8.9e-13 Score=124.64 Aligned_cols=169 Identities=12% Similarity=-0.047 Sum_probs=117.1
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCc---EEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGA---VFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 557 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~---~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 557 (732)
.|+||++||..+... .|. .+...|.++|| .|+.+|+||.|.... ..++++.+.++.+++.
T Consensus 3 ~~~vv~~HG~~~~~~--~~~-~~~~~l~~~G~~~~~v~~~d~~g~g~s~~------------~~~~~~~~~~~~~~~~-- 65 (181)
T 1isp_A 3 HNPVVMVHGIGGASF--NFA-GIKSYLVSQGWSRDKLYAVDFWDKTGTNY------------NNGPVLSRFVQKVLDE-- 65 (181)
T ss_dssp CCCEEEECCTTCCGG--GGH-HHHHHHHHTTCCGGGEEECCCSCTTCCHH------------HHHHHHHHHHHHHHHH--
T ss_pred CCeEEEECCcCCCHh--HHH-HHHHHHHHcCCCCccEEEEecCCCCCchh------------hhHHHHHHHHHHHHHH--
Confidence 578999999876542 343 34556666898 599999999775422 2456666666666654
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhC--CCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCC
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQR--PDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNV 635 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~--p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~ 635 (732)
.+.+++.++|+|+||+++..++.++ |++++++|+..|......... + +. .
T Consensus 66 ~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~----------~--~~----------------~ 117 (181)
T 1isp_A 66 TGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKA----------L--PG----------------T 117 (181)
T ss_dssp HCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSBC----------C--CC----------------S
T ss_pred cCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccccc----------C--CC----------------C
Confidence 2457899999999999999999987 899999999988755321100 0 00 0
Q ss_pred CCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHH
Q 004766 636 RRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEA 715 (732)
Q Consensus 636 ~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 715 (732)
.. ....|+|+++|++|..||+..+. + ...++++++++||....... +..
T Consensus 118 ~~---------~~~~p~l~i~G~~D~~v~~~~~~-----~--------------~~~~~~~~~~~gH~~~~~~~---~~~ 166 (181)
T 1isp_A 118 DP---------NQKILYTSIYSSADMIVMNYLSR-----L--------------DGARNVQIHGVGHIGLLYSS---QVN 166 (181)
T ss_dssp CT---------TCCCEEEEEEETTCSSSCHHHHC-----C--------------BTSEEEEESSCCTGGGGGCH---HHH
T ss_pred CC---------ccCCcEEEEecCCCccccccccc-----C--------------CCCcceeeccCchHhhccCH---HHH
Confidence 01 13569999999999999987431 1 12478889999998754332 455
Q ss_pred HHHHHHHHHH
Q 004766 716 ADRYGFMAKM 725 (732)
Q Consensus 716 ~~~~~fl~~~ 725 (732)
+.+.+||.+.
T Consensus 167 ~~i~~fl~~~ 176 (181)
T 1isp_A 167 SLIKEGLNGG 176 (181)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHhcc
Confidence 6677887653
No 200
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.46 E-value=5.2e-13 Score=136.87 Aligned_cols=214 Identities=14% Similarity=0.027 Sum_probs=124.5
Q ss_pred CCccEEEEEcCC-CCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCC
Q 004766 479 GSHPCLLYGYGG-FNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 557 (732)
Q Consensus 479 ~~~P~vv~~hG~-~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 557 (732)
++.|.||++||. ++......|.... ..|. ..|.|+++|.||.|..... .....+++++.+.+..+++.
T Consensus 34 g~~~~vvllHG~~pg~~~~~~w~~~~-~~L~-~~~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~-- 102 (291)
T 2wue_A 34 GNDQTVVLLHGGGPGAASWTNFSRNI-AVLA-RHFHVLAVDQPGYGHSDKR-------AEHGQFNRYAAMALKGLFDQ-- 102 (291)
T ss_dssp TCSSEEEEECCCCTTCCHHHHTTTTH-HHHT-TTSEEEEECCTTSTTSCCC-------SCCSSHHHHHHHHHHHHHHH--
T ss_pred CCCCcEEEECCCCCccchHHHHHHHH-HHHH-hcCEEEEECCCCCCCCCCC-------CCCCcCHHHHHHHHHHHHHH--
Confidence 344699999997 4322222344433 4566 5599999999998864321 11134667776666655554
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc------------cC-CCCC-----ccccc-cCCC-
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH------------KF-TIGH-----AWVSD-FGCS- 617 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~------------~~-~~~~-----~~~~~-~g~p- 617 (732)
...+++.++|+|+||.++..++.++|++++++|+..|........ .. .... .+... +.++
T Consensus 103 l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (291)
T 2wue_A 103 LGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKN 182 (291)
T ss_dssp HTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTSCSSGG
T ss_pred hCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhccCCHHHHHHHHHHhccCcc
Confidence 234689999999999999999999999999999887653210000 00 0000 00000 0111
Q ss_pred -CCHHH-------------HHHHHh----cC--cccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHH
Q 004766 618 -EEEEE-------------FYWLIK----YS--PLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQY 677 (732)
Q Consensus 618 -~~~~~-------------~~~~~~----~s--p~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~ 677 (732)
..++. +..+.. +. ...... .| +....+..|+||++|.+|..+|+..+.++++.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~p- 257 (291)
T 2wue_A 183 LITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGM-MW---REVYRLRQPVLLIWGREDRVNPLDGALVALKTIP- 257 (291)
T ss_dssp GSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGC-GG---GTGGGCCSCEEEEEETTCSSSCGGGGHHHHHHST-
T ss_pred cCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccch-hH---HHHhhCCCCeEEEecCCCCCCCHHHHHHHHHHCC-
Confidence 01111 111111 00 000000 00 0011378999999999999999998887766543
Q ss_pred hhcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHH
Q 004766 678 VLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 723 (732)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 723 (732)
..++++++++||....... .+..+.+.+||.
T Consensus 258 -------------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 288 (291)
T 2wue_A 258 -------------RAQLHVFGQCGHWVQVEKF--DEFNKLTIEFLG 288 (291)
T ss_dssp -------------TEEEEEESSCCSCHHHHTH--HHHHHHHHHHTT
T ss_pred -------------CCeEEEeCCCCCChhhhCH--HHHHHHHHHHHh
Confidence 2588899999998643222 234455667764
No 201
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.46 E-value=1.5e-12 Score=132.71 Aligned_cols=123 Identities=17% Similarity=0.143 Sum_probs=83.4
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHh
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHK 531 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 531 (732)
+...+.+.+| .++.+...-+++ +.|.||++||..+... .|.. +...|+ .||.|+++|.||.|.....
T Consensus 6 ~~~~~~~~~g-~~l~~~~~g~~~-----~~~~vvllHG~~~~~~--~~~~-~~~~L~-~~~~vi~~Dl~G~G~S~~~--- 72 (285)
T 3bwx_A 6 EDRYWTSSDG-LRLHFRAYEGDI-----SRPPVLCLPGLTRNAR--DFED-LATRLA-GDWRVLCPEMRGRGDSDYA--- 72 (285)
T ss_dssp EEEEEECTTS-CEEEEEEECBCT-----TSCCEEEECCTTCCGG--GGHH-HHHHHB-BTBCEEEECCTTBTTSCCC---
T ss_pred ccCeeecCCC-ceEEEEEcCCCC-----CCCcEEEECCCCcchh--hHHH-HHHHhh-cCCEEEeecCCCCCCCCCC---
Confidence 3445677799 899887664332 2578999999876542 3443 456677 5999999999998864321
Q ss_pred cccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEc
Q 004766 532 GGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH 592 (732)
Q Consensus 532 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~ 592 (732)
......+++++.+.+..+++. ...+++.++|+|+||.++..++.++|++++++|+.
T Consensus 73 ---~~~~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~ 128 (285)
T 3bwx_A 73 ---KDPMTYQPMQYLQDLEALLAQ--EGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLN 128 (285)
T ss_dssp ---SSGGGCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred ---CCccccCHHHHHHHHHHHHHh--cCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEe
Confidence 000112344444333333332 12358999999999999999999999999999875
No 202
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.46 E-value=3.2e-11 Score=126.63 Aligned_cols=253 Identities=12% Similarity=0.046 Sum_probs=155.1
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCc-eEEEEEEECCCCceec----cc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSD-WATIKLMRIEDQIVEA----DA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e-~~~i~v~dl~~g~~~~----~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 205 (732)
..+..++|||||++|+-..+..+.- ...+++++........ .. ........++|+||+ .|+....+
T Consensus 31 ~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~d------- 102 (344)
T 4gqb_B 31 RQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDS------- 102 (344)
T ss_dssp SEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETT-------
T ss_pred CCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECC-------
Confidence 3477899999999988665332211 1244444432211110 00 011124789999996 46655432
Q ss_pred CCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccc
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG 285 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 285 (732)
..|.+|++.+++......+....+...+..++|||||++|+..+.++. |.++|+.++.
T Consensus 103 ------------g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~-----i~iwd~~~~~----- 160 (344)
T 4gqb_B 103 ------------GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDIC-----IKVWDLAQQV----- 160 (344)
T ss_dssp ------------SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSC-----EEEEETTTTE-----
T ss_pred ------------CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCe-----EEEEECCCCc-----
Confidence 368999998775443222222223445678999999999987654433 7888988742
Q ss_pred ccccCCCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCEE
Q 004766 286 FKKRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQM 363 (732)
Q Consensus 286 ~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~l 363 (732)
....+........ ..|++++..+++....+ ..|..+|+.+++....+........+..+.+++ ++.+
T Consensus 161 --------~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 229 (344)
T 4gqb_B 161 --------VLSSYRAHAAQVTCVAASPHKDSVFLSCSED---NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEV 229 (344)
T ss_dssp --------EEEEECCCSSCEEEEEECSSCTTEEEEEETT---SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTE
T ss_pred --------EEEEEcCcCCceEEEEecCCCCCceeeeccc---cccccccccccceeeeeecceeeccceeeeecCCCCcc
Confidence 1223322222222 24888887766554433 368888998876444443333345577788886 3567
Q ss_pred EEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 364 IVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 364 ~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+++...++ .|++||+.+++.+..+..+...|..+.++|++..++++.+.. ..++.+|+.+++
T Consensus 230 l~sg~~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D---~~i~vwd~~~~~ 291 (344)
T 4gqb_B 230 FVFGDENG--TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSED---CSLAVLDSSLSE 291 (344)
T ss_dssp EEEEETTS--EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETT---SCEEEECTTCCE
T ss_pred eEEeccCC--cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCC---CeEEEEECCCCc
Confidence 77777774 789999988887777776677788899999987666665543 468889988773
No 203
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.45 E-value=5.8e-13 Score=134.92 Aligned_cols=210 Identities=11% Similarity=0.042 Sum_probs=125.4
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
.|+||++||..+... .|... ...|+ .+|.|+++|.||.|.....-. ......+++++.+.+..+++. .+.
T Consensus 20 ~~~vvllHG~~~~~~--~w~~~-~~~L~-~~~~vi~~Dl~G~G~S~~~~~----~~~~~~~~~~~a~dl~~~l~~--l~~ 89 (271)
T 1wom_A 20 KASIMFAPGFGCDQS--VWNAV-APAFE-EDHRVILFDYVGSGHSDLRAY----DLNRYQTLDGYAQDVLDVCEA--LDL 89 (271)
T ss_dssp SSEEEEECCTTCCGG--GGTTT-GGGGT-TTSEEEECCCSCCSSSCCTTC----CTTGGGSHHHHHHHHHHHHHH--TTC
T ss_pred CCcEEEEcCCCCchh--hHHHH-HHHHH-hcCeEEEECCCCCCCCCCCcc----cccccccHHHHHHHHHHHHHH--cCC
Confidence 378999999766543 34432 34466 689999999999886532100 001123455555555544443 234
Q ss_pred CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcccccccc-----cCC-------------CCCcccc-----ccCCC
Q 004766 561 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH-----KFT-------------IGHAWVS-----DFGCS 617 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~-----~~~-------------~~~~~~~-----~~g~p 617 (732)
+++.++|+|+||.+++.++.++|++++++|+..|........ .+. ....|.. .++.+
T Consensus 90 ~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (271)
T 1wom_A 90 KETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQP 169 (271)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCT
T ss_pred CCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 689999999999999999999999999999877642111000 000 0000100 01222
Q ss_pred CCHHHHHH----HHhcCc---------------ccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHh
Q 004766 618 EEEEEFYW----LIKYSP---------------LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYV 678 (732)
Q Consensus 618 ~~~~~~~~----~~~~sp---------------~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~ 678 (732)
..++..+. +....| ...+. .+..|+|+++|.+|..+|+..+.++.+.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~-- 237 (271)
T 1wom_A 170 DRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLS----------KVTVPSLILQCADDIIAPATVGKYMHQHLP-- 237 (271)
T ss_dssp TCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHT----------TCCSCEEEEEEETCSSSCHHHHHHHHHHSS--
T ss_pred CchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhcc----------ccCCCEEEEEcCCCCcCCHHHHHHHHHHCC--
Confidence 22221111 111111 01112 378999999999999999887776665433
Q ss_pred hcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 679 LCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
..++++++++||....... .+..+.+.+||.+++
T Consensus 238 ------------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 238 ------------YSSLKQMEARGHCPHMSHP--DETIQLIGDYLKAHV 271 (271)
T ss_dssp ------------SEEEEEEEEESSCHHHHCH--HHHHHHHHHHHHHHC
T ss_pred ------------CCEEEEeCCCCcCccccCH--HHHHHHHHHHHHhcC
Confidence 2588899999998643222 345566788987753
No 204
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.45 E-value=1.4e-12 Score=132.33 Aligned_cols=215 Identities=14% Similarity=0.117 Sum_probs=127.5
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
.|.||++||.++.. ..|... ...|+++||.|+++|.||.|..... .....+++++.+.+..+++.-- ..
T Consensus 4 ~~~vvllHG~~~~~--~~w~~~-~~~L~~~g~rVia~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~-~~ 72 (273)
T 1xkl_A 4 GKHFVLVHGACHGG--WSWYKL-KPLLEAAGHKVTALDLAASGTDLRK-------IEELRTLYDYTLPLMELMESLS-AD 72 (273)
T ss_dssp CCEEEEECCTTCCG--GGGTTH-HHHHHHTTCEEEECCCTTSTTCCCC-------GGGCCSHHHHHHHHHHHHHTSC-SS
T ss_pred CCeEEEECCCCCCc--chHHHH-HHHHHhCCCEEEEecCCCCCCCccC-------cccccCHHHHHHHHHHHHHHhc-cC
Confidence 47899999987654 245543 4556558999999999998865321 0112356777766666665411 13
Q ss_pred CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccccc---------ccccCCCCCccc----cccCCC----------
Q 004766 561 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDML---------RYHKFTIGHAWV----SDFGCS---------- 617 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~---------~~~~~~~~~~~~----~~~g~p---------- 617 (732)
+++.++|+||||+++..++.++|++++++|+..+..... ..........|. ..++.+
T Consensus 73 ~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T 1xkl_A 73 EKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFG 152 (273)
T ss_dssp SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECC
T ss_pred CCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccC
Confidence 589999999999999999999999999999776532100 000000000010 001100
Q ss_pred -----------CCHHHHHHHHh-cCcccCC-------CCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHh
Q 004766 618 -----------EEEEEFYWLIK-YSPLHNV-------RRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYV 678 (732)
Q Consensus 618 -----------~~~~~~~~~~~-~sp~~~~-------~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~ 678 (732)
..++....... ..|.... ... ........|+|+++|.+|..+|+..+.++++.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p~- 227 (273)
T 1xkl_A 153 PKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYF----TDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGV- 227 (273)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCC----CTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCC-
T ss_pred HHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhccccc----chhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCCC-
Confidence 01111111111 0111000 000 00001357999999999999999988887776542
Q ss_pred hcCCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 679 LCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
.++++++++||....... .+..+.+.+|+.+..
T Consensus 228 -------------~~~~~i~~aGH~~~~e~P--~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 228 -------------TEAIEIKGADHMAMLCEP--QKLCASLLEIAHKYN 260 (273)
T ss_dssp -------------SEEEEETTCCSCHHHHSH--HHHHHHHHHHHHHCC
T ss_pred -------------CeEEEeCCCCCCchhcCH--HHHHHHHHHHHHHhc
Confidence 378889999998653332 245567788987754
No 205
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.45 E-value=7.1e-13 Score=136.29 Aligned_cols=117 Identities=13% Similarity=0.079 Sum_probs=79.9
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHH
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCF 542 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~ 542 (732)
.++.+...-+. ...|.||++||.++... .|.... ..|.++||.|+++|.||.|..... ......++
T Consensus 33 ~~l~y~~~G~~-----~~g~~vvllHG~~~~~~--~w~~~~-~~L~~~g~rvia~Dl~G~G~S~~~------~~~~~~~~ 98 (297)
T 2xt0_A 33 LRMHYVDEGPR-----DAEHTFLCLHGEPSWSF--LYRKML-PVFTAAGGRVVAPDLFGFGRSDKP------TDDAVYTF 98 (297)
T ss_dssp CCEEEEEESCT-----TCSCEEEEECCTTCCGG--GGTTTH-HHHHHTTCEEEEECCTTSTTSCEE------SCGGGCCH
T ss_pred eEEEEEEccCC-----CCCCeEEEECCCCCcce--eHHHHH-HHHHhCCcEEEEeCCCCCCCCCCC------CCcccCCH
Confidence 56766544221 11578999999876543 444433 446658999999999998864321 00012345
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 543 DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 543 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
+++.+.+..+++. ...+++.++|+|+||.+++.++.++|++++++|+..+.
T Consensus 99 ~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~ 149 (297)
T 2xt0_A 99 GFHRRSLLAFLDA--LQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTA 149 (297)
T ss_dssp HHHHHHHHHHHHH--HTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCC
T ss_pred HHHHHHHHHHHHH--hCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCC
Confidence 5555555555443 12368999999999999999999999999999987764
No 206
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.45 E-value=1.3e-12 Score=131.83 Aligned_cols=105 Identities=14% Similarity=0.207 Sum_probs=75.3
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHc-CC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA-GY 557 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~ 557 (732)
+..|.||++||..++.. .|... ...|.++||.|+++|.||.|.....- ....+++++.+.+..+++. +.
T Consensus 8 ~~g~~vvllHG~~~~~~--~w~~~-~~~L~~~g~~via~Dl~G~G~S~~~~-------~~~~~~~~~a~dl~~~l~~l~~ 77 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAW--IWYKL-KPLLESAGHKVTAVDLSAAGINPRRL-------DEIHTFRDYSEPLMEVMASIPP 77 (264)
T ss_dssp -CCCEEEEECCTTCCGG--GGTTH-HHHHHHTTCEEEEECCTTSTTCSCCG-------GGCCSHHHHHHHHHHHHHHSCT
T ss_pred CCCCeEEEECCCccccc--hHHHH-HHHHHhCCCEEEEeecCCCCCCCCCc-------ccccCHHHHHHHHHHHHHHhCC
Confidence 45688999999876542 45543 45565589999999999988653210 1123566666665555544 21
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
.+++.++||||||+++..++.++|++++++|+..+.
T Consensus 78 --~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~ 113 (264)
T 2wfl_A 78 --DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAM 113 (264)
T ss_dssp --TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSC
T ss_pred --CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeec
Confidence 258999999999999999999999999999877653
No 207
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.45 E-value=4.8e-13 Score=138.51 Aligned_cols=117 Identities=14% Similarity=0.077 Sum_probs=80.3
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHH
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCF 542 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~ 542 (732)
.++.+...-+. +..|.||++||.++... .|... ...|+++||.|+++|.||.|..... ......++
T Consensus 34 ~~l~y~~~G~~-----~~g~~vvllHG~~~~~~--~w~~~-~~~L~~~g~rvia~Dl~G~G~S~~~------~~~~~y~~ 99 (310)
T 1b6g_A 34 LRAHYLDEGNS-----DAEDVFLCLHGEPTWSY--LYRKM-IPVFAESGARVIAPDFFGFGKSDKP------VDEEDYTF 99 (310)
T ss_dssp CEEEEEEEECT-----TCSCEEEECCCTTCCGG--GGTTT-HHHHHHTTCEEEEECCTTSTTSCEE------SCGGGCCH
T ss_pred eEEEEEEeCCC-----CCCCEEEEECCCCCchh--hHHHH-HHHHHhCCCeEEEeCCCCCCCCCCC------CCcCCcCH
Confidence 56766544321 11578999999877643 44443 3456658999999999998864321 00112345
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 543 DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 543 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
+++.+.+..|++. ...+++.++|+|+||.++..++.++|++++++|+..+.
T Consensus 100 ~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~ 150 (310)
T 1b6g_A 100 EFHRNFLLALIER--LDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAX 150 (310)
T ss_dssp HHHHHHHHHHHHH--HTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHH--cCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccc
Confidence 6666555555443 12358999999999999999999999999999887653
No 208
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.45 E-value=2e-13 Score=139.40 Aligned_cols=125 Identities=10% Similarity=0.002 Sum_probs=83.3
Q ss_pred CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC---CCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhccccc
Q 004766 460 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT---PSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALA 536 (732)
Q Consensus 460 dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~---~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~ 536 (732)
+| .+|.+...-+. +...|+||++||..+.... +.|.......|+ ++|.|+++|+||.|....... ..
T Consensus 19 ~~-~~l~y~~~G~~----~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~s~~~~~----~~ 88 (286)
T 2qmq_A 19 PY-GSVTFTVYGTP----KPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEII-QNFVRVHVDAPGMEEGAPVFP----LG 88 (286)
T ss_dssp TT-EEEEEEEESCC----CTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHH-TTSCEEEEECTTTSTTCCCCC----TT
T ss_pred CC-eEEEEEeccCC----CCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHh-cCCCEEEecCCCCCCCCCCCC----CC
Confidence 67 78877655332 1256899999998766421 012211446677 689999999999764211100 00
Q ss_pred CCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 537 KKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 537 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
....+++++.+.+..+++. .+.+++.++|+|+||++++.++.++|++++++|+..|..
T Consensus 89 ~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 146 (286)
T 2qmq_A 89 YQYPSLDQLADMIPCILQY--LNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDP 146 (286)
T ss_dssp CCCCCHHHHHHTHHHHHHH--HTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CCccCHHHHHHHHHHHHHH--hCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCC
Confidence 0012556666655555443 233589999999999999999999999999999988855
No 209
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.44 E-value=1.8e-12 Score=134.54 Aligned_cols=115 Identities=16% Similarity=0.079 Sum_probs=83.2
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| .++.+...- .++.|.||++||.+++.. .|... ...|+ .+|.|+++|.||.|.... ...
T Consensus 14 ~~g-~~l~y~~~G------~g~~~pvvllHG~~~~~~--~w~~~-~~~L~-~~~~via~Dl~G~G~S~~--------~~~ 74 (316)
T 3afi_E 14 VLG-SSMAYRETG------AQDAPVVLFLHGNPTSSH--IWRNI-LPLVS-PVAHCIAPDLIGFGQSGK--------PDI 74 (316)
T ss_dssp ETT-EEEEEEEES------CTTSCEEEEECCTTCCGG--GGTTT-HHHHT-TTSEEEEECCTTSTTSCC--------CSS
T ss_pred eCC-EEEEEEEeC------CCCCCeEEEECCCCCchH--HHHHH-HHHHh-hCCEEEEECCCCCCCCCC--------CCC
Confidence 378 787665431 133358999999887653 34443 35566 569999999999886532 112
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
..+++++.+.+..+++. ...+++.++|+|+||.+++.++.++|++++++|+..+
T Consensus 75 ~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~ 128 (316)
T 3afi_E 75 AYRFFDHVRYLDAFIEQ--RGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEF 128 (316)
T ss_dssp CCCHHHHHHHHHHHHHH--TTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHH--cCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeecc
Confidence 34567777776666654 2336899999999999999999999999999987764
No 210
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.44 E-value=4.8e-13 Score=134.66 Aligned_cols=208 Identities=13% Similarity=0.023 Sum_probs=125.4
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCC
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 557 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 557 (732)
.+..|+||++||+.+.. ..|. .+...|+ .+|.|+++|+||.|... ......+++++.+.+..+++.
T Consensus 17 ~~~~~~vv~~HG~~~~~--~~~~-~~~~~l~-~~~~v~~~d~~G~G~s~--------~~~~~~~~~~~~~~~~~~l~~-- 82 (267)
T 3fla_A 17 PDARARLVCLPHAGGSA--SFFF-PLAKALA-PAVEVLAVQYPGRQDRR--------HEPPVDSIGGLTNRLLEVLRP-- 82 (267)
T ss_dssp TTCSEEEEEECCTTCCG--GGGH-HHHHHHT-TTEEEEEECCTTSGGGT--------TSCCCCSHHHHHHHHHHHTGG--
T ss_pred CCCCceEEEeCCCCCCc--hhHH-HHHHHhc-cCcEEEEecCCCCCCCC--------CCCCCcCHHHHHHHHHHHHHh--
Confidence 35679999999987653 2333 3456677 67999999999976421 112233566666666655554
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhCCCe----eeEEEEcCCcccccccccCCCC---Ccc---ccccCC-C----CCHH-
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQRPDL----FGCALAHVGVMDMLRYHKFTIG---HAW---VSDFGC-S----EEEE- 621 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~----f~a~v~~~p~~d~~~~~~~~~~---~~~---~~~~g~-p----~~~~- 621 (732)
.+.+++.++|+|+||++++.++.++|++ ++++|+..+............. ..+ ...++. + .+++
T Consensus 83 ~~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (267)
T 3fla_A 83 FGDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPEL 162 (267)
T ss_dssp GTTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHH
T ss_pred cCCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHH
Confidence 2457899999999999999999999986 7888776654322111000000 000 001110 0 0111
Q ss_pred ----------HHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCC
Q 004766 622 ----------EFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNP 691 (732)
Q Consensus 622 ----------~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 691 (732)
.+..+..+.+... . .+..|+|+++|.+|..||+..+.++.+.+ ..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-------------~~~ 218 (267)
T 3fla_A 163 LAMVLPAIRSDYRAVETYRHEPG--R---------RVDCPVTVFTGDHDPRVSVGEARAWEEHT-------------TGP 218 (267)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCTT--C---------CBSSCEEEEEETTCTTCCHHHHHGGGGGB-------------SSC
T ss_pred HHHHHHHHHHHHHhhhccccccc--C---------cCCCCEEEEecCCCCCCCHHHHHHHHHhc-------------CCC
Confidence 1112222322211 1 37889999999999999987776655433 235
Q ss_pred EEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 692 IIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 692 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
+.++++++ ||...... ..+....+.+||.+..
T Consensus 219 ~~~~~~~g-gH~~~~~~--~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 219 ADLRVLPG-GHFFLVDQ--AAPMIATMTEKLAGPA 250 (267)
T ss_dssp EEEEEESS-STTHHHHT--HHHHHHHHHHHTC---
T ss_pred ceEEEecC-CceeeccC--HHHHHHHHHHHhcccc
Confidence 79999998 99865322 2345556777876653
No 211
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.44 E-value=2.3e-10 Score=119.98 Aligned_cols=227 Identities=8% Similarity=0.035 Sum_probs=144.0
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccce---------eeeeEEEEeCCcEEEEEEecCCCCCC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWF---------KFSSIAWTHDSKGFFYSRYPAPKEGK 204 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~---------~~~~~~WspDg~~l~y~~~~~~~~~~ 204 (732)
..+.|||||++++++.... ..|+++|+++++.+... .... ...+++|+|||+.++++...
T Consensus 92 ~~~~~s~dg~~l~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------ 161 (353)
T 3vgz_A 92 FGATINNTTQTLWFGNTVN----SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG------ 161 (353)
T ss_dssp CSEEEETTTTEEEEEETTT----TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES------
T ss_pred ceEEECCCCCEEEEEecCC----CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC------
Confidence 3688999999887665322 27999999999854321 1110 13568999999998877521
Q ss_pred CCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 205 DMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
....|+++++.++... ..+.... .....+.|||||++|++... ...++++|+.++..
T Consensus 162 -----------~~~~i~~~d~~~~~~~--~~~~~~~--~~~~~~~~s~dg~~l~~~~~-----~~~i~~~d~~~~~~--- 218 (353)
T 3vgz_A 162 -----------KESVIWVVDGGNIKLK--TAIQNTG--KMSTGLALDSEGKRLYTTNA-----DGELITIDTADNKI--- 218 (353)
T ss_dssp -----------SSCEEEEEETTTTEEE--EEECCCC--TTCCCCEEETTTTEEEEECT-----TSEEEEEETTTTEE---
T ss_pred -----------CCceEEEEcCCCCceE--EEecCCC--CccceEEECCCCCEEEEEcC-----CCeEEEEECCCCeE---
Confidence 2346999998765321 1222111 12346889999999877642 24688999887420
Q ss_pred cccccCCCCCcEEeeec---ccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec
Q 004766 285 GFKKRDGLLPFVKLIDG---FDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN 359 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~~~---~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~ 359 (732)
...+..+ ..... ..|+|||+.+|+.... ...|+.+|+.+++... .++.. .. ..+.+++
T Consensus 219 ----------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~~~~~-~~~~~--~~-~~~~~s~ 281 (353)
T 3vgz_A 219 ----------LSRKKLLDDGKEHFFINISLDTARQRAFITDSK---AAEVLVVDTRNGNILA-KVAAP--ES-LAVLFNP 281 (353)
T ss_dssp ----------EEEEECCCSSSCCCEEEEEEETTTTEEEEEESS---SSEEEEEETTTCCEEE-EEECS--SC-CCEEEET
T ss_pred ----------EEEEEcCCCCCCcccceEEECCCCCEEEEEeCC---CCEEEEEECCCCcEEE-EEEcC--CC-ceEEECC
Confidence 1111111 11111 2589999988765432 3579999998876322 23322 11 3577777
Q ss_pred CC-EEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEec
Q 004766 360 LN-QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTS 414 (732)
Q Consensus 360 ~~-~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss 414 (732)
++ .+++....+ ..|.+||+.+++.+..+..+. ....+.+++|++.++++..+
T Consensus 282 dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 282 ARNEAYVTHRQA--GKVSVIDAKSYKVVKTFDTPT-HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TTTEEEEEETTT--TEEEEEETTTTEEEEEEECCS-EEEEEEECTTSCEEEEEEEC
T ss_pred CCCEEEEEECCC--CeEEEEECCCCeEEEEEecCC-CCCeEEEcCCCCEEEEEEcc
Confidence 54 466665444 479999998888766665443 45677889999988888766
No 212
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.44 E-value=2e-11 Score=147.92 Aligned_cols=264 Identities=8% Similarity=0.069 Sum_probs=169.8
Q ss_pred CCCCcEEeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEE
Q 004766 82 RYDAPFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIK 161 (732)
Q Consensus 82 ~~~~p~~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~ 161 (732)
....|.+.+++++|.....+ ...||..+..++..+.+...... ..+.|||||++|||.. . .+|+
T Consensus 205 ~v~~~~~s~d~l~~~~~~dg--~~~l~~~~~~g~~~~~l~~~~~~--------~~~~~SpDG~~la~~~--~----~~i~ 268 (1045)
T 1k32_A 205 HVSSPVIVGHRIYFITDIDG--FGQIYSTDLDGKDLRKHTSFTDY--------YPRHLNTDGRRILFSK--G----GSIY 268 (1045)
T ss_dssp CCEEEEEETTEEEEEECTTS--SCEEEEEETTSCSCEECCCCCSS--------CEEEEEESSSCEEEEE--T----TEEE
T ss_pred cccceEEeCCEEEEEEeccC--ceEEEEEeCCCCcceEecCCCCc--------ceeeEcCCCCEEEEEe--C----CEEE
Confidence 34455666777777754332 34588877544444555443322 2568999999999984 2 3799
Q ss_pred EEECCCCceeccccc-----------ceeeeeEEEE-eCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCC
Q 004766 162 LMRIEDQIVEADALS-----------WFKFSSIAWT-HDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQ 229 (732)
Q Consensus 162 v~dl~~g~~~~~~~~-----------~~~~~~~~Ws-pDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~ 229 (732)
++|++++........ ......++|| |||+.|++... ..|+.+++.++.
T Consensus 269 ~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~--------------------~~i~~~~~~~~~ 328 (1045)
T 1k32_A 269 IFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSR--------------------GQAFIQDVSGTY 328 (1045)
T ss_dssp EECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEET--------------------TEEEEECTTSSB
T ss_pred EecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEEc--------------------CEEEEEcCCCCc
Confidence 999965543311110 0024689999 99999999851 258888876543
Q ss_pred CCCeEEEecCCCCe-eEEEeEEecCCcEEEEEEecCCcceEEEE-EEeCCCCCCCcccccccCCCCCcEEeeec-ccceE
Q 004766 230 SEDILCWKDPEHPK-YIFSGHVTEDGQYLVMCIEENCDPVNKVY-YCDLSALPEGLEGFKKRDGLLPFVKLIDG-FDAQY 306 (732)
Q Consensus 230 ~~~~~v~~~~~~~~-~~~~~~~SpDg~~l~~~~~~~~~~~~~l~-~~d~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~ 306 (732)
.. . ...... ....+.|| ||+.|++.+. ...+| ++++.++. ...+... .....
T Consensus 329 ~~--~---~~~~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~d~~~~~--------------~~~l~~~~~~~~~ 383 (1045)
T 1k32_A 329 VL--K---VPEPLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIYDYRTGK--------------AEKFEENLGNVFA 383 (1045)
T ss_dssp EE--E---CSCCSCEEEEEECSS-SEEEEEEEET-----TEEEEEEEETTTCC--------------EEECCCCCCSEEE
T ss_pred eE--E---ccCCCcceEEeeeEc-CCCeEEEEEC-----CCceEEEEECCCCC--------------ceEecCCccceee
Confidence 11 1 122223 45688999 9999988764 35799 99987642 2333321 11123
Q ss_pred EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCE-EEEEEecC-------CeeEEEEE
Q 004766 307 EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MIVSYLSD-------VKYVLQIR 378 (732)
Q Consensus 307 ~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~-l~~~~~~~-------g~~~l~~~ 378 (732)
..|+|||+.|++.+++ ..|+++|++++. ...++... ...+..+.|++|+. |++..... ....|++|
T Consensus 384 ~~~SpDG~~la~~~~~----~~v~~~d~~tg~-~~~~~~~~-~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~ 457 (1045)
T 1k32_A 384 MGVDRNGKFAVVANDR----FEIMTVDLETGK-PTVIERSR-EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVY 457 (1045)
T ss_dssp EEECTTSSEEEEEETT----SEEEEEETTTCC-EEEEEECS-SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEE
T ss_pred eEECCCCCEEEEECCC----CeEEEEECCCCc-eEEeccCC-CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEE
Confidence 3599999999987654 379999999887 45555322 24567889998755 54444432 34689999
Q ss_pred eCCCCceeeecccccceeeEeecccCCcEEEEEEe
Q 004766 379 DLKNGSLLHQLPIEIGSVNAISARREDSVVFISFT 413 (732)
Q Consensus 379 d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~s 413 (732)
|+++|+ ...++.+...+..+.+++||+.+++...
T Consensus 458 d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 458 DMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp ETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred ECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 998776 3666655445566788999998876554
No 213
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.43 E-value=4.4e-13 Score=136.51 Aligned_cols=251 Identities=12% Similarity=0.055 Sum_probs=148.2
Q ss_pred eEEEEEEEcc-CCCeeEEEEEEEcCCCC-----CCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEccc---
Q 004766 450 HVHQVFVPSK-DGSTKIPMFIVSKKNIK-----LDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIR--- 520 (732)
Q Consensus 450 ~~~~~~~~s~-dG~~~i~~~~~~p~~~~-----~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~r--- 520 (732)
...++++.|. -| .++.+.++.|+++. .++++|+|.++||..+....+.-......++++.|.++++++..
T Consensus 13 ~~~~~~~~S~~l~-~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~ 91 (299)
T 4fol_A 13 RLIKLSHNSNSTK-TSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRG 91 (299)
T ss_dssp EEEEEEEECTTTS-SEEEEEEEECGGGGCC------CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCS
T ss_pred EEEEEEEECcccC-CceEEEEEcCCCCCccccccCCCcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcce
Confidence 5566777764 67 89999999998763 35689999999998765332222223456777789999998752
Q ss_pred ----CCC--C----CchhHHhccccc--CCccHH-----HHHHHHHHHHH----HcCCCCCCcEEEEecChhHHHHHHHH
Q 004766 521 ----GGG--E----YGEEWHKGGALA--KKQNCF-----DDFISASEYLI----SAGYTQSRKLCIEGGSNGGLLVGACI 579 (732)
Q Consensus 521 ----G~g--~----~g~~~~~~~~~~--~~~~~~-----~D~~~~~~~l~----~~~~~d~~~i~i~G~S~GG~l~~~~~ 579 (732)
++. . .+..|+...... .+...+ ++++..++.-. ++...+.++.+|.|+||||+-++.++
T Consensus 92 ~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~a 171 (299)
T 4fol_A 92 DEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGY 171 (299)
T ss_dssp TTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHH
T ss_pred eecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHH
Confidence 110 0 011111111000 011112 33444433221 12335668899999999999999988
Q ss_pred hhC--CCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEee
Q 004766 580 NQR--PDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTA 657 (732)
Q Consensus 580 ~~~--p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g 657 (732)
.++ |+.|+++.+.+|..+........ ..+...+|... . ...+++|...+++... ...+++||-+|
T Consensus 172 l~~~~~~~~~~~~s~s~~~~p~~~~~~~--~~~~~~~g~~~--~---~~~~~d~~~l~~~~~~------~~~~~i~id~G 238 (299)
T 4fol_A 172 LKGYSGKRYKSCSAFAPIVNPSNVPWGQ--KAFKGYLGEEK--A---QWEAYDPCLLIKNIRH------VGDDRILIHVG 238 (299)
T ss_dssp HHTGGGTCCSEEEEESCCCCGGGSHHHH--HHHHHHTC----------CGGGCHHHHGGGSCC------CTTCCEEEEEE
T ss_pred HhCCCCCceEEEEecccccCcccccccc--cccccccccch--h---hhhhcCHHHHHHhccc------CCCCceEEEec
Confidence 874 78999999999988764321100 00011223221 0 1133444433322100 13578999999
Q ss_pred CCCCCCCch-HHHHHHHHHHHhhcCCCCCCCCCCC--EEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 004766 658 DHDDRVVPL-HSLKLLATMQYVLCTSLENSPQTNP--IIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 728 (732)
Q Consensus 658 ~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 728 (732)
.+|....-. .+.+|.++++++ |.+ +.++..+|.+|...- ......+.+.|..++||+
T Consensus 239 ~~D~f~~~~l~~~~f~~a~~~~----------g~~~~~~~r~~~GydHsy~f----~~~fi~dhl~fha~~Lgl 298 (299)
T 4fol_A 239 DSDPFLEEHLKPELLLEAVKAT----------SWQDYVEIKKVHGFDHSYYF----VSTFVPEHAEFHARNLGL 298 (299)
T ss_dssp TTCTTHHHHTCTHHHHHHHTTS----------TTTTCEEEEEETTCCSSHHH----HHHHHHHHHHHHHHHTTC
T ss_pred CCCcchhhhcCHHHHHHHHHhc----------CCCceEEEEeCCCCCCCHHH----HHHHHHHHHHHHHHhcCC
Confidence 999765321 246788888776 655 789999988996421 235566788999999986
No 214
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.43 E-value=1.5e-10 Score=119.24 Aligned_cols=241 Identities=11% Similarity=0.091 Sum_probs=155.5
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+..++|||||++||-... ..+|++||++++..+... .........+|+||++.|+....+
T Consensus 15 ~V~~~~fsp~~~~l~s~~~-----dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d------------- 76 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLY-----SGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD------------- 76 (304)
T ss_dssp CEEEEEECSSSSEEEEEET-----TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-------------
T ss_pred ceEEEEECCCCCEEEEEcC-----CCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC-------------
Confidence 3678999999999886532 248999999998754321 111224678999999988877533
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
..|.+|++.++.. +..+.. +...+..++|+|++++|+..+.++ .|.++|+.++.
T Consensus 77 ------~~i~vwd~~~~~~--~~~~~~--h~~~v~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~~----------- 130 (304)
T 2ynn_A 77 ------FRIRVFNYNTGEK--VVDFEA--HPDYIRSIAVHPTKPYVLSGSDDL-----TVKLWNWENNW----------- 130 (304)
T ss_dssp ------SEEEEEETTTCCE--EEEEEC--CSSCEEEEEECSSSSEEEEEETTS-----CEEEEEGGGTT-----------
T ss_pred ------CEEEEEECCCCcE--EEEEeC--CCCcEEEEEEcCCCCEEEEECCCC-----eEEEEECCCCc-----------
Confidence 3689999987642 223332 344567899999999987655433 37778887631
Q ss_pred CCCcEEeeecccceE--EEEEec-CCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec--CCEEEEE
Q 004766 292 LLPFVKLIDGFDAQY--EVIAND-DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN--LNQMIVS 366 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~--~~~s~d-g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~--~~~l~~~ 366 (732)
.......+....+ ..|+|+ +..|+. ... ...|..+|+.+......+.... ...+..+.+.+ ++.++++
T Consensus 131 --~~~~~~~~h~~~v~~v~~~p~~~~~l~s-gs~---D~~v~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s 203 (304)
T 2ynn_A 131 --ALEQTFEGHEHFVMCVAFNPKDPSTFAS-GCL---DRTVKVWSLGQSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMIT 203 (304)
T ss_dssp --EEEEEECCCCSCEEEEEECTTCTTEEEE-EET---TSEEEEEETTCSSCSEEEECCC-TTCEEEEEECCSTTCCEEEE
T ss_pred --chhhhhcccCCcEEEEEECCCCCCEEEE-EeC---CCeEEEEECCCCCccceeccCC-cCcEEEEEEEEcCCCCEEEE
Confidence 1122222222222 247884 555553 332 3468888987665333343322 24456666654 4567777
Q ss_pred EecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 367 YLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 367 ~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
...++ .|.+||+.+++.+..+..+...+..+.++|+++.++ +.+. -..+..+|+.+++
T Consensus 204 ~s~D~--~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~---Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 204 ASDDL--TIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIII-SGSE---DGTLKIWNSSTYK 261 (304)
T ss_dssp EETTS--EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEE-EEET---TSCEEEEETTTCC
T ss_pred EcCCC--eEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEE-EEcC---CCeEEEEECCCCc
Confidence 77774 799999988877677766667787888899988543 4433 2568889988775
No 215
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.43 E-value=1e-11 Score=126.47 Aligned_cols=117 Identities=13% Similarity=0.030 Sum_probs=90.5
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcc--------cCCCCCchhHHhc-c
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANI--------RGGGEYGEEWHKG-G 533 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--------rG~g~~g~~~~~~-~ 533 (732)
..+++.|+.|++. .++.|+||.+||+. +. +. +||+++.+|. ||+.++|. |++. +
T Consensus 90 ~~~~~~i~lP~~~--~~p~Pvii~i~~~~-------~~------~~-~G~a~~~~~~~~v~~~~~~gs~g~g~-f~~ly~ 152 (375)
T 3pic_A 90 ISFTVTITYPSSG--TAPYPAIIGYGGGS-------LP------AP-AGVAMINFNNDNIAAQVNTGSRGQGK-FYDLYG 152 (375)
T ss_dssp EEEEEEEECCSSS--CSSEEEEEEETTCS-------SC------CC-TTCEEEEECHHHHSCCSSGGGTTCSH-HHHHHC
T ss_pred eEEEEEEECCCCC--CCCccEEEEECCCc-------cc------cC-CCeEEEEecccccccccCCCCcccee-cccccC
Confidence 5688999999864 37899999998841 11 33 8999999987 66667777 4422 2
Q ss_pred -cccCCccH--HHHHHHHHHHHHHcC--CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccc
Q 004766 534 -ALAKKQNC--FDDFISASEYLISAG--YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 597 (732)
Q Consensus 534 -~~~~~~~~--~~D~~~~~~~l~~~~--~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d 597 (732)
...++.-. .-|+..+++||..+. .+|++||+|+|+|+||..++++++.. ++|+++|+.+|..+
T Consensus 153 ~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g~~ 220 (375)
T 3pic_A 153 SSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESGAG 220 (375)
T ss_dssp TTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCCTT
T ss_pred CccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCCCC
Confidence 12222222 258999999999998 89999999999999999999999985 58999999987653
No 216
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.42 E-value=2.9e-11 Score=126.90 Aligned_cols=239 Identities=9% Similarity=-0.002 Sum_probs=153.4
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc---c--ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD---A--LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~---~--~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
+..++||||++ |+... .+ .+|+|||+++++.+.. . .....+..++|+|||+.|+....+.
T Consensus 85 v~~~~~s~d~~-l~~~s-~d----g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~--------- 149 (344)
T 4gqb_B 85 VADLTWVGERG-ILVAS-DS----GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI--------- 149 (344)
T ss_dssp EEEEEEETTTE-EEEEE-TT----SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS---------
T ss_pred EEEEEEeCCCe-EEEEE-CC----CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC---------
Confidence 67899999975 44332 22 4799999999874321 1 1112357899999999988775432
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
.|.+|++.++. ++.....+...+..+.|+|+++.++++.+.. ..|.++|+.++.
T Consensus 150 ----------~i~iwd~~~~~----~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D----~~v~iwd~~~~~-------- 203 (344)
T 4gqb_B 150 ----------CIKVWDLAQQV----VLSSYRAHAAQVTCVAASPHKDSVFLSCSED----NRILLWDTRCPK-------- 203 (344)
T ss_dssp ----------CEEEEETTTTE----EEEEECCCSSCEEEEEECSSCTTEEEEEETT----SCEEEEETTSSS--------
T ss_pred ----------eEEEEECCCCc----EEEEEcCcCCceEEEEecCCCCCceeeeccc----cccccccccccc--------
Confidence 58899987653 2322223344567899999998766655432 237788987743
Q ss_pred cCCCCCcEEeeecc---cceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEE
Q 004766 289 RDGLLPFVKLIDGF---DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMI 364 (732)
Q Consensus 289 ~~~~~~~~~l~~~~---~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~ 364 (732)
+...+.... ......|+|++..+++.... +..|..+|+.+++....+..+. ..+..+.+++++ .++
T Consensus 204 -----~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~---dg~v~~wd~~~~~~~~~~~~h~--~~v~~v~fsp~g~~~l 273 (344)
T 4gqb_B 204 -----PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE---NGTVSLVDTKSTSCVLSSAVHS--QCVTGLVFSPHSVPFL 273 (344)
T ss_dssp -----CEEECC----CCCEEEEEECSSCTTEEEEEET---TSEEEEEESCC--CCEEEECCS--SCEEEEEECSSSSCCE
T ss_pred -----eeeeeecceeeccceeeeecCCCCcceEEecc---CCcEEEEECCCCcEEEEEcCCC--CCEEEEEEccCCCeEE
Confidence 122221111 11122478876666554433 3468889998877556665554 568889998754 577
Q ss_pred EEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 365 VSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 365 ~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
++...|+ .|++||+.+++. ..+..+.+.|..+.++|++..++.+.+.. .++..+++.+.
T Consensus 274 asgs~D~--~i~vwd~~~~~~-~~~~~H~~~V~~v~~sp~~~~llas~s~D---~~v~~w~v~~~ 332 (344)
T 4gqb_B 274 ASLSEDC--SLAVLDSSLSEL-FRSQAHRDFVRDATWSPLNHSLLTTVGWD---HQVVHHVVPTE 332 (344)
T ss_dssp EEEETTS--CEEEECTTCCEE-EEECCCSSCEEEEEECSSSTTEEEEEETT---SCEEEEECCC-
T ss_pred EEEeCCC--eEEEEECCCCcE-EEEcCCCCCEEEEEEeCCCCeEEEEEcCC---CeEEEEECCCC
Confidence 7877774 688999987765 34444567788999999998777665542 45777777654
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.42 E-value=3.4e-11 Score=139.06 Aligned_cols=259 Identities=12% Similarity=0.077 Sum_probs=166.1
Q ss_pred EeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccC--------CceEE
Q 004766 88 KRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSG--------SDWAT 159 (732)
Q Consensus 88 ~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G--------~e~~~ 159 (732)
++|.++.|.....+.....||+++..+++... +. +. ......++|| ||+.|+|+..... ....+
T Consensus 138 pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~--~~--~~---~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~ 209 (693)
T 3iuj_A 138 RDGRILAYSLSLAGSDWREIHLMDVESKQPLE--TP--LK---DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHK 209 (693)
T ss_dssp TTSSEEEEEEECSSCCEEEEEEEETTTCSEEE--EE--EE---EEESCCCEEE-TTTEEEEEESSCCC-------CCCCE
T ss_pred CCCCEEEEEEecCCCceEEEEEEECCCCCCCc--cc--cC---CceeccEEEe-CCCEEEEEEecCcccccccccCCCcE
Confidence 36777888877777777788888876554221 11 10 0112478899 9999999987642 23468
Q ss_pred EEEEECCCCce----eccccc--ceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCe
Q 004766 160 IKLMRIEDQIV----EADALS--WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDI 233 (732)
Q Consensus 160 i~v~dl~~g~~----~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~ 233 (732)
||++++.++.. +-.... ...+.++.|||||++|++++... ....+||++++.++...-+
T Consensus 210 v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~---------------~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 210 VYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS---------------TSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp EEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS---------------SSCCEEEEEETTSTTCCCE
T ss_pred EEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC---------------CCCcEEEEEECCCCCCceE
Confidence 99999987652 211111 11236789999999999987533 2335899999987654444
Q ss_pred EEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecC
Q 004766 234 LCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDD 313 (732)
Q Consensus 234 ~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg 313 (732)
.+....+ . ...+ ++++|++|+|.++... ....|+.++++++. ...++.++....... .|+++|
T Consensus 275 ~l~~~~~-~--~~~~-~~~~g~~l~~~t~~~~-~~~~l~~~d~~~~~-----------~~~~~~l~~~~~~~~-~~s~~g 337 (693)
T 3iuj_A 275 TVQGDLD-A--DVSL-VDNKGSTLYLLTNRDA-PNRRLVTVDAANPG-----------PAHWRDLIPERQQVL-TVHSGS 337 (693)
T ss_dssp EEECSSS-S--CEEE-EEEETTEEEEEECTTC-TTCEEEEEETTSCC-----------GGGCEEEECCCSSCE-EEEEET
T ss_pred EEeCCCC-c--eEEE-EeccCCEEEEEECCCC-CCCEEEEEeCCCCC-----------ccccEEEecCCCCEE-EEEEEC
Confidence 4443322 1 1223 7899999999876543 35789999998743 122566666544445 789999
Q ss_pred CeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEec-CCeeEEEEEeCCCCceeeecc
Q 004766 314 TVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLS-DVKYVLQIRDLKNGSLLHQLP 390 (732)
Q Consensus 314 ~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~-~g~~~l~~~d~~~g~~~~~l~ 390 (732)
++|++...+++ ..+|++++++++. .+.+..+. ...+..+.+.++ +.+++.... .....|+.+|+++|+. +.+.
T Consensus 338 ~~lv~~~~~~g-~~~l~~~d~~g~~-~~~l~~p~-~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~-~~l~ 412 (693)
T 3iuj_A 338 GYLFAEYMVDA-TARVEQFDYEGKR-VREVALPG-LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI-SLYR 412 (693)
T ss_dssp TEEEEEEEETT-EEEEEEECTTSCE-EEEECCSS-SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE-EEEE
T ss_pred CEEEEEEEECC-eeEEEEEECCCCe-eEEeecCC-CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE-EEEE
Confidence 99988777654 5689999998654 34442222 234555555543 567666654 3446899999987764 4443
No 218
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.42 E-value=8.5e-13 Score=132.49 Aligned_cols=96 Identities=14% Similarity=0.054 Sum_probs=70.3
Q ss_pred cc-EEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCC
Q 004766 481 HP-CLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 559 (732)
Q Consensus 481 ~P-~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 559 (732)
.| .||++||..+... .|.. ....|. .+|.|+++|.||.|..... ...+++++. +.+.+. .+
T Consensus 12 g~~~vvllHG~~~~~~--~w~~-~~~~L~-~~~~vi~~Dl~G~G~S~~~---------~~~~~~~~~---~~l~~~--l~ 73 (258)
T 1m33_A 12 GNVHLVLLHGWGLNAE--VWRC-IDEELS-SHFTLHLVDLPGFGRSRGF---------GALSLADMA---EAVLQQ--AP 73 (258)
T ss_dssp CSSEEEEECCTTCCGG--GGGG-THHHHH-TTSEEEEECCTTSTTCCSC---------CCCCHHHHH---HHHHTT--SC
T ss_pred CCCeEEEECCCCCChH--HHHH-HHHHhh-cCcEEEEeeCCCCCCCCCC---------CCcCHHHHH---HHHHHH--hC
Confidence 46 8999999766543 3444 345577 7999999999998864322 123455543 444432 33
Q ss_pred CCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 560 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
+++.++|+|+||.++..++.++|++++++|+..+.
T Consensus 74 -~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 108 (258)
T 1m33_A 74 -DKAIWLGWSLGGLVASQIALTHPERVRALVTVASS 108 (258)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCC
Confidence 78999999999999999999999999999886543
No 219
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.42 E-value=1.9e-10 Score=120.54 Aligned_cols=244 Identities=10% Similarity=0.029 Sum_probs=156.0
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+..+.|||||++|+-.. ...+|++||+.+++.+... ........++|+|||+.|+....+
T Consensus 56 ~~v~~~~~s~d~~~l~s~s-----~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d------------ 118 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSAS-----QDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD------------ 118 (340)
T ss_dssp SCEEEEEECTTSSEEEEEE-----TTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT------------
T ss_pred CceEEEEECCCCCEEEEEe-----CCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC------------
Confidence 3467889999999887553 2248999999988754321 112224678999999988876533
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
..+.+|++.+.............+...+..+.|+++++ ++..+.+ ..+.++|+.++.
T Consensus 119 -------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d-----~~i~~wd~~~~~---------- 175 (340)
T 1got_B 119 -------NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD-----TTCALWDIETGQ---------- 175 (340)
T ss_dssp -------CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETT-----SCEEEEETTTTE----------
T ss_pred -------CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECC-----CcEEEEECCCCc----------
Confidence 36888888765433223322223344566788999987 4333322 237888987642
Q ss_pred CCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEec
Q 004766 291 GLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLS 369 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~ 369 (732)
....+........ ..|+|+++.|+..+. ...|..+|+.++.....+..+. ..+..+.+++++.++++...
T Consensus 176 ---~~~~~~~h~~~v~~~~~~~~~~~l~sg~~----d~~v~~wd~~~~~~~~~~~~h~--~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 176 ---QTTTFTGHTGDVMSLSLAPDTRLFVSGAC----DASAKLWDVREGMCRQTFTGHE--SDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp ---EEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCSEEEEECCCS--SCEEEEEECTTSSEEEEEET
T ss_pred ---EEEEEcCCCCceEEEEECCCCCEEEEEeC----CCcEEEEECCCCeeEEEEcCCc--CCEEEEEEcCCCCEEEEEcC
Confidence 1222222211112 248898876654333 3468888988776444444443 56888999987777788877
Q ss_pred CCeeEEEEEeCCCCceeeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 370 DVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
++ .|.+||+.+++.+..+..+ ...+..+.+++++..++.... -..+..||+.+++
T Consensus 247 d~--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~----d~~i~vwd~~~~~ 303 (340)
T 1got_B 247 DA--TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD----DFNCNVWDALKAD 303 (340)
T ss_dssp TS--CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET----TSEEEEEETTTCC
T ss_pred CC--cEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECC----CCeEEEEEcccCc
Confidence 75 6889999877654444432 235778889999986654432 2578999987764
No 220
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.41 E-value=2.1e-12 Score=133.00 Aligned_cols=104 Identities=17% Similarity=0.138 Sum_probs=77.7
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhHHHHHHhc--CcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHc
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHL--GAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA 555 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 555 (732)
.+..|.||++||..+... .|.. +...|.++ ||.|+++|+||.|..... ....++|+.+.+..+++.
T Consensus 33 ~~~~~~vvllHG~~~~~~--~~~~-~~~~L~~~~~g~~vi~~D~~G~G~s~~~---------~~~~~~~~~~~l~~~~~~ 100 (302)
T 1pja_A 33 RASYKPVIVVHGLFDSSY--SFRH-LLEYINETHPGTVVTVLDLFDGRESLRP---------LWEQVQGFREAVVPIMAK 100 (302)
T ss_dssp --CCCCEEEECCTTCCGG--GGHH-HHHHHHHHSTTCCEEECCSSCSGGGGSC---------HHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEECCCCCChh--HHHH-HHHHHHhcCCCcEEEEeccCCCccchhh---------HHHHHHHHHHHHHHHhhc
Confidence 356788999999876643 3444 34556657 999999999998642211 123577888888777766
Q ss_pred CCCCCCcEEEEecChhHHHHHHHHhhCCC-eeeEEEEcCCcc
Q 004766 556 GYTQSRKLCIEGGSNGGLLVGACINQRPD-LFGCALAHVGVM 596 (732)
Q Consensus 556 ~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-~f~a~v~~~p~~ 596 (732)
. .+++.++|||+||+++..++.++|+ +++++|+..|..
T Consensus 101 ~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 139 (302)
T 1pja_A 101 A---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQ 139 (302)
T ss_dssp C---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred C---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCc
Confidence 4 4689999999999999999999999 799998877654
No 221
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.41 E-value=2.6e-13 Score=149.69 Aligned_cols=229 Identities=14% Similarity=0.101 Sum_probs=141.1
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCccC-CCCcChhHHHHHHhcCcEEEEEcccCCC-CCchhHHhcccccCCccHH
Q 004766 465 IPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSFSVSRTILMRHLGAVFCIANIRGGG-EYGEEWHKGGALAKKQNCF 542 (732)
Q Consensus 465 i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~rG~g-~~g~~~~~~~~~~~~~~~~ 542 (732)
+.+.++.|+....+++.|+||++|||..... ...+..........+|++|+.+|||.+. +|+..-.... .......+
T Consensus 86 l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~-~~~~n~gl 164 (522)
T 1ukc_A 86 LFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQ-NGDLNAGL 164 (522)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHH-SSCTTHHH
T ss_pred CEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccc-cCCCChhH
Confidence 5567778876444567899999999953322 2344443222222469999999999532 3332111110 01234568
Q ss_pred HHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhhC----CCeeeEEEEcCCcccccccccCCC--CCccccc
Q 004766 543 DDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQR----PDLFGCALAHVGVMDMLRYHKFTI--GHAWVSD 613 (732)
Q Consensus 543 ~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~----p~~f~a~v~~~p~~d~~~~~~~~~--~~~~~~~ 613 (732)
.|+.+|++|+.++. -.||+||.|+|+|+||.+++.++... +.+|+++|+.+|............ .......
T Consensus 165 ~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~~~~~~ 244 (522)
T 1ukc_A 165 LDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRTVSEMEFQFERFVND 244 (522)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCCSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcCCHHHHHHHHHHHHHH
Confidence 99999999998762 35999999999999999988877653 679999999999764322111000 0001123
Q ss_pred cCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCe--EEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCC
Q 004766 614 FGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPS--TLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNP 691 (732)
Q Consensus 614 ~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p--~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 691 (732)
.|++...+..+.|++.++-..+.... .+.......+| ++..+...|..+.+.++.++.++.+.. ++|
T Consensus 245 ~gc~~~~~~~~~Lr~~~~~~l~~a~~-~~~~~~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g~~~----------~vp 313 (522)
T 1ukc_A 245 TGCSSARDSLECLREQDIATIQKGNT-GSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFDAGNFI----------KVP 313 (522)
T ss_dssp TTCTTCSSHHHHHHHSCHHHHHHHSS-CCCCTTCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHTCSC----------CCC
T ss_pred cCCCCHHHHHHHHHcCCHHHHHHHHH-hccccccccCcccccccccccCCcccCCCHHHHHhcCCCC----------CCC
Confidence 46553334455666654422111100 00000012234 566677788889999988887665443 789
Q ss_pred EEEEEeCCCCCCCC
Q 004766 692 IIGRIERKAGHGVG 705 (732)
Q Consensus 692 ~~~~~~~~~gH~~~ 705 (732)
+.+-...++||.+.
T Consensus 314 ~l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 314 VLVGDDTDEGSNFA 327 (522)
T ss_dssp EEEEEETBGGGGTS
T ss_pred EEEEeecchhHHhh
Confidence 99999999999875
No 222
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.41 E-value=3.5e-11 Score=140.15 Aligned_cols=255 Identities=9% Similarity=0.005 Sum_probs=159.8
Q ss_pred EECCCCcEEEEEEeccCCceEEEEEEECC---CCce--ecc----cccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 138 SVSEDAKYLAYALSYSGSDWATIKLMRIE---DQIV--EAD----ALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 138 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~---~g~~--~~~----~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
.++|||++++|....+|.+...||+++.. +++. +.+ +..+ ....+++|||||+.|+|+....
T Consensus 113 ~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~-------- 184 (741)
T 1yr2_A 113 LPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDG-------- 184 (741)
T ss_dssp CCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEET--------
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCC--------
Confidence 35699999999999888767899999987 5542 211 1111 1347899999999999997653
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCc---------ceEEEEEEeCCC
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCD---------PVNKVYYCDLSA 278 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~---------~~~~l~~~d~~~ 278 (732)
.....+|+++++.++......+ .. ....+++|||| +.|++...+... ...+||++++.+
T Consensus 185 ------G~e~~~i~v~dl~tg~~~~~~~-~~----~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt 252 (741)
T 1yr2_A 185 ------GSDWRTVKFVGVADGKPLADEL-KW----VKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGT 252 (741)
T ss_dssp ------TCSEEEEEEEETTTCCEEEEEE-EE----EESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTS
T ss_pred ------CCceEEEEEEECCCCCCCCccC-CC----ceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCC
Confidence 1233579999998875321111 11 01136899999 999998754431 135699999876
Q ss_pred CCCCcccccccCCCCCcEEeeeccc----ceEEEEEecCCeEEEEeCCC-CCCceEEEEeCCCCC-C-ceEeccCCCCCc
Q 004766 279 LPEGLEGFKKRDGLLPFVKLIDGFD----AQYEVIANDDTVFTFLTNKD-APKYKIIRVDLKEPN-D-WFEVIPEAERDV 351 (732)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~s~dg~~l~~~s~~~-~~~~~l~~~d~~~~~-~-~~~l~~~~~~~~ 351 (732)
+... -..+....+ .....|||||+.|++.+.+. .....|+.+|++++. . ++.|.++.. ..
T Consensus 253 ~~~~------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~ 319 (741)
T 1yr2_A 253 PQSA------------DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK-AQ 319 (741)
T ss_dssp CGGG------------CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS-SC
T ss_pred Cchh------------CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC-ce
Confidence 4210 112222211 11235899999999888654 135689999998762 3 567766542 33
Q ss_pred eeEEEEecCCEEEEEEecCC-eeEEEEEeCCCC-ceeeecccc-cceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 352 LESATAVNLNQMIVSYLSDV-KYVLQIRDLKNG-SLLHQLPIE-IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 352 l~~~~~~~~~~l~~~~~~~g-~~~l~~~d~~~g-~~~~~l~~~-~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
...+. ..++.+++....++ ..+|++++++++ ...+.+... ...+..++++ ++.++++...- .-.+++.+++.+
T Consensus 320 ~~~~~-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~d-g~~~l~~~~~~g 395 (741)
T 1yr2_A 320 WDFVD-GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHD-AKSQVLAFDLDG 395 (741)
T ss_dssp EEEEE-EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEET-TEEEEEEEETTS
T ss_pred EEEEe-ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEEC-CEEEEEEEeCCC
Confidence 33332 34477888877654 568999999864 233444322 3445455544 55677766543 345788888754
Q ss_pred C
Q 004766 429 E 429 (732)
Q Consensus 429 ~ 429 (732)
+
T Consensus 396 ~ 396 (741)
T 1yr2_A 396 K 396 (741)
T ss_dssp C
T ss_pred C
Confidence 3
No 223
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.40 E-value=7.8e-11 Score=124.82 Aligned_cols=205 Identities=12% Similarity=0.000 Sum_probs=131.4
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
+..++|||||++||.+. |+...+|+|||+++++.+..........+++|||||+.|+....+
T Consensus 136 ~~~v~fSpDg~~la~as---~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~--------------- 197 (365)
T 4h5i_A 136 TKLVYISREGTVAAIAS---SKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS--------------- 197 (365)
T ss_dssp EEEEEECTTSSCEEEEE---SCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS---------------
T ss_pred EEEEEEcCCCCEEEEEE---CCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce---------------
Confidence 55788999999998874 333468999999999865332222235789999999999887422
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 293 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 293 (732)
.+.+++..++... .......+...+..++|||||++++..+.++. ....++.+++...... ..
T Consensus 198 -----~~~~~~~~~~~~~--~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~-~~~~i~~~~~~~~~~~---------~~ 260 (365)
T 4h5i_A 198 -----SLEVISTVTGSCI--ARKTDFDKNWSLSKINFIADDTVLIAASLKKG-KGIVLTKISIKSGNTS---------VL 260 (365)
T ss_dssp -----CEEEEETTTCCEE--EEECCCCTTEEEEEEEEEETTEEEEEEEESSS-CCEEEEEEEEETTEEE---------EE
T ss_pred -----eEEEEEeccCcce--eeeecCCCCCCEEEEEEcCCCCEEEEEecCCc-ceeEEeecccccceec---------ce
Confidence 2555665544321 11111223345668999999999988776543 2345777776542100 00
Q ss_pred CcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEec-cCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 294 PFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVI-PEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 294 ~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~-~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
....+........ ..|+|||+.|+..+.+ ..|.++|+.+++....+. .|. ..+..+.+++++.++++...|+
T Consensus 261 ~~~~~~~~~~~V~~~~~Spdg~~lasgs~D----~~V~iwd~~~~~~~~~~~~gH~--~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 261 RSKQVTNRFKGITSMDVDMKGELAVLASND----NSIALVKLKDLSMSKIFKQAHS--FAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEEEESSCSCEEEEEECTTSCEEEEEETT----SCEEEEETTTTEEEEEETTSSS--SCEEEEEECTTSCEEEEEETTS
T ss_pred eeeeecCCCCCeEeEEECCCCCceEEEcCC----CEEEEEECCCCcEEEEecCccc--CCEEEEEECCCCCEEEEEeCCC
Confidence 0111222222222 2489999988765543 358889998876334433 233 6789999999888888988884
Q ss_pred eeEEEEEeCC
Q 004766 372 KYVLQIRDLK 381 (732)
Q Consensus 372 ~~~l~~~d~~ 381 (732)
.|++|++.
T Consensus 335 --tvrvw~ip 342 (365)
T 4h5i_A 335 --TIHIIKLP 342 (365)
T ss_dssp --EEEEEECC
T ss_pred --eEEEEEcC
Confidence 78888875
No 224
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.40 E-value=1.4e-11 Score=126.67 Aligned_cols=116 Identities=13% Similarity=-0.004 Sum_probs=89.4
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcc--------cCCCCCchhHHhccc
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANI--------RGGGEYGEEWHKGGA 534 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--------rG~g~~g~~~~~~~~ 534 (732)
..+++.|++|++ .++.|+||.+||+. . .+. +||+++.+|. +|+.++|. |++.-.
T Consensus 123 ~sf~~~i~lP~g---~~P~Pvii~~~~~~-~------------~~~-~G~A~i~f~~~~va~d~~~gsrG~g~-f~~ly~ 184 (433)
T 4g4g_A 123 ISFSASIRKPSG---AGPFPAIIGIGGAS-I------------PIP-SNVATITFNNDEFGAQMGSGSRGQGK-FYDLFG 184 (433)
T ss_dssp EEEEEEEECCSS---SCCEEEEEEESCCC-S------------CCC-TTSEEEEECHHHHSCCSSGGGTTCSH-HHHHHC
T ss_pred EEEEEEEECCCC---CCCccEEEEECCCc-c------------ccC-CCeEEEEeCCcccccccCCCcCCccc-cccccC
Confidence 456899999976 47899999998741 1 033 8999999997 55667777 553222
Q ss_pred c--cCCccH--HHHHHHHHHHHHH----cCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccc
Q 004766 535 L--AKKQNC--FDDFISASEYLIS----AGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 597 (732)
Q Consensus 535 ~--~~~~~~--~~D~~~~~~~l~~----~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d 597 (732)
. .++.-. .-|+..+++||.. +..+|++||+++|+|+||..++++++.. ++|+++|+.+|..+
T Consensus 185 ~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~sg~~ 254 (433)
T 4g4g_A 185 RDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQESGAG 254 (433)
T ss_dssp TTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCTT
T ss_pred CccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecCCCC
Confidence 1 222221 2589999999999 7889999999999999999999999985 58999999988654
No 225
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.40 E-value=2.5e-12 Score=129.19 Aligned_cols=213 Identities=12% Similarity=0.058 Sum_probs=124.6
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
.|.||++||..... ..|.. ....|.++||.|+++|.||.|..... .....+++++.+.+..+++.-- ..
T Consensus 3 ~~~vvllHG~~~~~--~~w~~-~~~~L~~~g~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~-~~ 71 (257)
T 3c6x_A 3 FAHFVLIHTICHGA--WIWHK-LKPLLEALGHKVTALDLAASGVDPRQ-------IEEIGSFDEYSEPLLTFLEALP-PG 71 (257)
T ss_dssp CCEEEEECCTTCCG--GGGTT-HHHHHHHTTCEEEEECCTTSTTCSCC-------GGGCCSHHHHTHHHHHHHHTSC-TT
T ss_pred CCcEEEEcCCccCc--CCHHH-HHHHHHhCCCEEEEeCCCCCCCCCCC-------cccccCHHHHHHHHHHHHHhcc-cc
Confidence 36799999987553 24554 34556558999999999998865321 0112457777776666665410 12
Q ss_pred CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc---c--c---cc-ccc-CC-CCCcccc-----------------
Q 004766 561 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM---D--M---LR-YHK-FT-IGHAWVS----------------- 612 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~---d--~---~~-~~~-~~-~~~~~~~----------------- 612 (732)
+++.++||||||+++..++.++|++++++|...+.. . . .. ... .. ....+..
T Consensus 72 ~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (257)
T 3c6x_A 72 EKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFT 151 (257)
T ss_dssp CCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHH
T ss_pred CCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHH
Confidence 589999999999999999999999999998765532 0 0 00 000 00 0000000
Q ss_pred ----ccCCCCCHHHHHHHHh-cCcccCC-------CCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhc
Q 004766 613 ----DFGCSEEEEEFYWLIK-YSPLHNV-------RRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLC 680 (732)
Q Consensus 613 ----~~g~p~~~~~~~~~~~-~sp~~~~-------~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~ 680 (732)
.+......+....... ..|.... ... ........|+|+++|++|..+|+..+.++++.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~~~--- 224 (257)
T 3c6x_A 152 LLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFF----TKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKP--- 224 (257)
T ss_dssp HHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCC----CTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCC---
T ss_pred HHHHHHhcCCCHHHHHHHHHhcCCCccchhhhcccccc----ChhhcCcccEEEEEeCCCcccCHHHHHHHHHHCCC---
Confidence 0000011111111111 1111000 000 00001356999999999999999988877766542
Q ss_pred CCCCCCCCCCCEEEEEeCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 681 TSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
.++++++++||....... .+..+.+.+|+..
T Consensus 225 -----------~~~~~i~~~gH~~~~e~P--~~~~~~l~~f~~~ 255 (257)
T 3c6x_A 225 -----------DKVYKVEGGDHKLQLTKT--KEIAEILQEVADT 255 (257)
T ss_dssp -----------SEEEECCSCCSCHHHHSH--HHHHHHHHHHHHH
T ss_pred -----------CeEEEeCCCCCCcccCCH--HHHHHHHHHHHHh
Confidence 388899999998643322 2444566777754
No 226
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.40 E-value=1.3e-11 Score=126.51 Aligned_cols=117 Identities=16% Similarity=0.073 Sum_probs=82.8
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| .++.+... |..|.||++||.++... .|.. ....|+ ..|.|+++|.||.|..... . .....
T Consensus 16 ~~g-~~l~y~~~--------G~g~~lvllHG~~~~~~--~w~~-~~~~L~-~~~~via~Dl~G~G~S~~~-~---~~~~~ 78 (294)
T 1ehy_A 16 LPD-VKIHYVRE--------GAGPTLLLLHGWPGFWW--EWSK-VIGPLA-EHYDVIVPDLRGFGDSEKP-D---LNDLS 78 (294)
T ss_dssp CSS-CEEEEEEE--------ECSSEEEEECCSSCCGG--GGHH-HHHHHH-TTSEEEEECCTTSTTSCCC-C---TTCGG
T ss_pred ECC-EEEEEEEc--------CCCCEEEEECCCCcchh--hHHH-HHHHHh-hcCEEEecCCCCCCCCCCC-c---ccccc
Confidence 478 88876543 23478999999877643 4444 345567 5599999999998865321 0 00001
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
..+++++.+.+..+++. ...+++.++|||+||.++..++.++|++++++|+..+
T Consensus 79 ~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~ 132 (294)
T 1ehy_A 79 KYSLDKAADDQAALLDA--LGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDP 132 (294)
T ss_dssp GGCHHHHHHHHHHHHHH--TTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECC
T ss_pred CcCHHHHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecC
Confidence 24566666666666654 2335899999999999999999999999999988775
No 227
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.39 E-value=1.2e-10 Score=121.13 Aligned_cols=247 Identities=13% Similarity=0.020 Sum_probs=149.3
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccc-----eeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSW-----FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~-----~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
..++|||||++++++.... ..|+++|+.+++.+... ... .....++|+|||+.|+++......
T Consensus 37 ~~~~~s~dg~~l~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~------- 105 (337)
T 1pby_B 37 MVPMVAPGGRIAYATVNKS----ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRL------- 105 (337)
T ss_dssp CCEEECTTSSEEEEEETTT----TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEE-------
T ss_pred cceEEcCCCCEEEEEeCCC----CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccc-------
Confidence 3788999999887775322 37999999998854321 111 123679999999999887521100
Q ss_pred CCcccCC--cccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 209 GTETDSN--LYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 209 ~~~~~~~--~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
..... ....|+++++.++... ..+.... ....+.|||||++|++. . ..++++|+.++..
T Consensus 106 --~~~~~~~~~~~i~v~d~~~~~~~--~~~~~~~---~~~~~~~s~dg~~l~~~--~-----~~i~~~d~~~~~~----- 166 (337)
T 1pby_B 106 --ELTHFEVQPTRVALYDAETLSRR--KAFEAPR---QITMLAWARDGSKLYGL--G-----RDLHVMDPEAGTL----- 166 (337)
T ss_dssp --CSSCEEECCCEEEEEETTTTEEE--EEEECCS---SCCCEEECTTSSCEEEE--S-----SSEEEEETTTTEE-----
T ss_pred --ccccccccCceEEEEECCCCcEE--EEEeCCC---CcceeEECCCCCEEEEe--C-----CeEEEEECCCCcE-----
Confidence 00000 2357999998765321 2222222 12467899999998776 2 2488999887420
Q ss_pred cccCCCCCcEEeeecc-cceEEEEEecCCeEEEEeCCCCC--------------------CceEEEEeCCCCCCceEecc
Q 004766 287 KKRDGLLPFVKLIDGF-DAQYEVIANDDTVFTFLTNKDAP--------------------KYKIIRVDLKEPNDWFEVIP 345 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~s~~~~~--------------------~~~l~~~d~~~~~~~~~l~~ 345 (732)
...+..+. .... .|+|||+.+++....+.. .+.|+.+|+++++ ...+..
T Consensus 167 --------~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-~~~~~~ 236 (337)
T 1pby_B 167 --------VEDKPIQSWEAET-YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE-MAMREV 236 (337)
T ss_dssp --------EEEECSTTTTTTT-BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC-EEEEEE
T ss_pred --------eeeeeccccCCCc-eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCC-ceEeec
Confidence 11111111 1111 478888877654322110 1168899998876 222211
Q ss_pred CCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEE
Q 004766 346 EAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCN 425 (732)
Q Consensus 346 ~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d 425 (732)
......+.++.+++++..++.. + ..|++||+++++.+..+..+ ..+..+.+++|++.+++. + ....++.+|
T Consensus 237 ~~~~~~~~~~~~s~dg~~l~~~--~--~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~--~--~~~~i~v~d 307 (337)
T 1pby_B 237 RIMDVFYFSTAVNPAKTRAFGA--Y--NVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLG--G--ALGDLAAYD 307 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEE--E--SEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEE--S--BSSEEEEEE
T ss_pred CCCCCceeeEEECCCCCEEEEe--C--CeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEE--c--CCCcEEEEE
Confidence 1112345678888865444443 2 58999999888765566543 234567888999977764 2 247899999
Q ss_pred CCCCC
Q 004766 426 LKTET 430 (732)
Q Consensus 426 ~~~~~ 430 (732)
+.+++
T Consensus 308 ~~~~~ 312 (337)
T 1pby_B 308 AETLE 312 (337)
T ss_dssp TTTCC
T ss_pred CcCCc
Confidence 98885
No 228
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.39 E-value=5.8e-13 Score=136.36 Aligned_cols=150 Identities=12% Similarity=0.019 Sum_probs=98.0
Q ss_pred CCCCCcEEEEecChhHHHHHHHHhhCCCeee-EEEEcCCcccccccccCCCCCccccccCCCCCHHHHHHHHhcCcccCC
Q 004766 557 YTQSRKLCIEGGSNGGLLVGACINQRPDLFG-CALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNV 635 (732)
Q Consensus 557 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~-a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~ 635 (732)
.+|++||+|+|+|+||+|++.++..+|++|+ ++++.++......... .....+...++.+..++........+|+..+
T Consensus 7 ~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 85 (318)
T 2d81_A 7 NVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQ-YYTSCMYNGYPSITTPTANMKSWSGNQIASV 85 (318)
T ss_dssp CEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSS-CGGGGSTTCCCCCHHHHHHHHHHBTTTBCCG
T ss_pred CcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchH-HHHHHhhccCCCCCCHHHHHHHhhcccCChh
Confidence 4799999999999999999999999999998 7665554221110000 0000000001212122222111111455544
Q ss_pred CCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCC--CCEEEEEeCCCCCCCCCchH----
Q 004766 636 RRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT--NPIIGRIERKAGHGVGLPTQ---- 709 (732)
Q Consensus 636 ~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~---- 709 (732)
.+. ..+|+||+||++|.+||+.++.+++++|++. + .++++++++++||++.....
T Consensus 86 ~~l---------~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~----------g~~~~ve~~~~~g~gH~~~~~~~~~~~ 146 (318)
T 2d81_A 86 ANL---------GQRKIYMWTGSSDTTVGPNVMNQLKAQLGNF----------DNSANVSYVTTTGAVHTFPTDFNGAGD 146 (318)
T ss_dssp GGG---------GGCEEEEEEETTCCSSCHHHHHHHHHHHTTT----------SCGGGEEEEEETTCCSSEEESSCCTTC
T ss_pred HcC---------CCCcEEEEeCCCCCCcCHHHHHHHHHHHHhc----------CCCcceEEEEeCCCCCCCccCCcccCc
Confidence 442 3479999999999999999999999999976 5 37999999999998642211
Q ss_pred -------------HHHHHHHHHHHHHHHHh
Q 004766 710 -------------KMIDEAADRYGFMAKML 726 (732)
Q Consensus 710 -------------~~~~~~~~~~~fl~~~l 726 (732)
..++....++.||...|
T Consensus 147 ~~c~~~~~pyi~~~~~d~~~~i~~ff~g~~ 176 (318)
T 2d81_A 147 NSCSLSTSPYISNCNYDGAGAALKWIYGSL 176 (318)
T ss_dssp CCTTSCCTTCEEECSSCHHHHHHHHHHSSC
T ss_pred cccccCCCCcccCCCChHHHHHHHHHhccC
Confidence 01566678889987654
No 229
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.39 E-value=3.6e-12 Score=127.94 Aligned_cols=116 Identities=13% Similarity=0.019 Sum_probs=85.2
Q ss_pred CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCc
Q 004766 460 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQ 539 (732)
Q Consensus 460 dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~ 539 (732)
+| .++.+...-+ ...|+||++||..+... .|.. ....|+ ++|.|+++|.||.|..... ...
T Consensus 7 ~g-~~l~~~~~g~------~~~~~vv~lHG~~~~~~--~~~~-~~~~L~-~~~~v~~~D~~G~G~S~~~--------~~~ 67 (264)
T 3ibt_A 7 NG-TLMTYSESGD------PHAPTLFLLSGWCQDHR--LFKN-LAPLLA-RDFHVICPDWRGHDAKQTD--------SGD 67 (264)
T ss_dssp TT-EECCEEEESC------SSSCEEEEECCTTCCGG--GGTT-HHHHHT-TTSEEEEECCTTCSTTCCC--------CSC
T ss_pred CC-eEEEEEEeCC------CCCCeEEEEcCCCCcHh--HHHH-HHHHHH-hcCcEEEEccccCCCCCCC--------ccc
Confidence 67 7777654422 23589999999887653 3444 345666 6799999999998864321 223
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC-CCeeeEEEEcCCcc
Q 004766 540 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVGVM 596 (732)
Q Consensus 540 ~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~~f~a~v~~~p~~ 596 (732)
.+++++.+.+..+++. .+.+++.++|+|+||+++..++.++ |++++++|+..|..
T Consensus 68 ~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~ 123 (264)
T 3ibt_A 68 FDSQTLAQDLLAFIDA--KGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL 123 (264)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS
T ss_pred cCHHHHHHHHHHHHHh--cCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC
Confidence 4566666666666554 2345899999999999999999999 99999999988755
No 230
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.37 E-value=3.4e-12 Score=132.58 Aligned_cols=116 Identities=12% Similarity=0.058 Sum_probs=82.9
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| .++.+... + .++.|.||++||..+... .|... ...|+ ..|.|+++|.||.|..... ...
T Consensus 28 ~~g-~~l~y~~~---G---~g~~~~vvllHG~~~~~~--~w~~~-~~~L~-~~~~via~Dl~GhG~S~~~-------~~~ 89 (318)
T 2psd_A 28 VLD-SFINYYDS---E---KHAENAVIFLHGNATSSY--LWRHV-VPHIE-PVARCIIPDLIGMGKSGKS-------GNG 89 (318)
T ss_dssp ETT-EEEEEEEC---C---SCTTSEEEEECCTTCCGG--GGTTT-GGGTT-TTSEEEEECCTTSTTCCCC-------TTS
T ss_pred eCC-eEEEEEEc---C---CCCCCeEEEECCCCCcHH--HHHHH-HHHhh-hcCeEEEEeCCCCCCCCCC-------CCC
Confidence 478 77765432 2 234578999999876643 34432 34466 5689999999998864321 112
Q ss_pred ccHHHHHHHHHHHHHHcCCCCC-CcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 539 QNCFDDFISASEYLISAGYTQS-RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~-~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
..+++++.+.+..+++. .+. +++.++|+||||.+++.++.++|++++++|+..|
T Consensus 90 ~~~~~~~a~dl~~ll~~--l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~ 144 (318)
T 2psd_A 90 SYRLLDHYKYLTAWFEL--LNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMES 144 (318)
T ss_dssp CCSHHHHHHHHHHHHTT--SCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHHh--cCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEecc
Confidence 24577777777777765 333 6899999999999999999999999999988543
No 231
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.37 E-value=4.9e-10 Score=116.42 Aligned_cols=238 Identities=10% Similarity=0.010 Sum_probs=155.3
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc------ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA------LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~------~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
+..+.|||||++|+... + ..|++||+.+++..... ........++|+||++.|+....+
T Consensus 54 v~~~~~~~~~~~l~~~~--d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------- 118 (337)
T 1gxr_A 54 VCAVTISNPTRHVYTGG--K----GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA--------- 118 (337)
T ss_dssp CCEEEECSSSSEEEEEC--B----SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS---------
T ss_pred eEEEEEecCCcEEEEcC--C----CeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC---------
Confidence 55889999999998763 2 47999999887532111 122235789999999988887532
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
..|++|++.++.......+.. +......+.|+|+|++|+....++ .++++|+.++.
T Consensus 119 ----------~~i~~~d~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~~~~------- 174 (337)
T 1gxr_A 119 ----------STLSIWDLAAPTPRIKAELTS--SAPACYALAISPDSKVCFSCCSDG-----NIAVWDLHNQT------- 174 (337)
T ss_dssp ----------SEEEEEECCCC--EEEEEEEC--SSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTE-------
T ss_pred ----------CcEEEEECCCCCcceeeeccc--CCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCc-------
Confidence 368899988764322222222 233456889999999988765433 38888987632
Q ss_pred ccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEE
Q 004766 288 KRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVS 366 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~ 366 (732)
....+....... ...|+|+++.|+..+. ...|..+|+.++.. ...+.. ...+..+.+++++.+++.
T Consensus 175 ------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~~-~~~~~~--~~~v~~~~~s~~~~~l~~ 241 (337)
T 1gxr_A 175 ------LVRQFQGHTDGASCIDISNDGTKLWTGGL----DNTVRSWDLREGRQ-LQQHDF--TSQIFSLGYCPTGEWLAV 241 (337)
T ss_dssp ------EEEEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTTEE-EEEEEC--SSCEEEEEECTTSSEEEE
T ss_pred ------eeeeeecccCceEEEEECCCCCEEEEEec----CCcEEEEECCCCce-EeeecC--CCceEEEEECCCCCEEEE
Confidence 122222111111 2258899888776553 34689999987752 222333 245788899886666666
Q ss_pred EecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 367 YLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 367 ~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
...++ .|++|++.+++. ..+......+..+.++++++.++.. +. -..+..||+.+++
T Consensus 242 ~~~~~--~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~-~~---dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 242 GMESS--NVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVST-GK---DNLLNAWRTPYGA 298 (337)
T ss_dssp EETTS--CEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEE-ET---TSEEEEEETTTCC
T ss_pred EcCCC--cEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEe-cC---CCcEEEEECCCCe
Confidence 66664 688999986664 4454456677888899999866533 22 3579999998874
No 232
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.36 E-value=6.9e-10 Score=116.81 Aligned_cols=242 Identities=10% Similarity=0.008 Sum_probs=151.9
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+..++|||||++|+.... + ..|++||+.+++.+.... .......++|+||++.|+....+
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~-d----g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d------------ 95 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSK-D----SSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD------------ 95 (369)
T ss_dssp SCEEEEEECTTSCEEEEEES-S----SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT------------
T ss_pred ceEEEEEEcCCCCEEEEEeC-C----CEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC------------
Confidence 34778999999999887642 2 379999999988553221 22235789999999988876533
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
..|++|++.++.. +..+. .......+.|+|+|++++....+.......+.++++....... .+.. .
T Consensus 96 -------g~i~iwd~~~~~~--~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~-~~~~-~ 161 (369)
T 3zwl_B 96 -------YSIKLWDVSNGQC--VATWK---SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATH-ELTK-V 161 (369)
T ss_dssp -------TEEEEEETTTCCE--EEEEE---CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTC-CEEE-E
T ss_pred -------CeEEEEECCCCcE--EEEee---cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccce-eecc-c
Confidence 3689999987642 22333 2234568999999999988765421122457777776532110 0000 0
Q ss_pred CCCCcEEeeecc---cceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCC-CCceEeccCCCCCceeEEEEecCCEEEEE
Q 004766 291 GLLPFVKLIDGF---DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP-NDWFEVIPEAERDVLESATAVNLNQMIVS 366 (732)
Q Consensus 291 ~~~~~~~l~~~~---~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~-~~~~~l~~~~~~~~l~~~~~~~~~~l~~~ 366 (732)
...+...+.... ......|+|+++.|+..+. ...|..+|+.+. .....+..+ ...+..+.+++++.+++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~ 235 (369)
T 3zwl_B 162 SEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK----DGKISKYDVSNNYEYVDSIDLH--EKSISDMQFSPDLTYFIT 235 (369)
T ss_dssp CSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET----TSEEEEEETTTTTEEEEEEECC--SSCEEEEEECTTSSEEEE
T ss_pred ccceeeeccCCcCccceeEEEEcCCCCEEEEEcC----CCEEEEEECCCCcEeEEEEecC--CCceeEEEECCCCCEEEE
Confidence 001122222111 1122358899888776543 347899999873 323333333 356888999987667777
Q ss_pred EecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEe
Q 004766 367 YLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFT 413 (732)
Q Consensus 367 ~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~s 413 (732)
...++ .|++||+.+++.+..+. ....+..+.+++++..+++...
T Consensus 236 ~~~d~--~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~ 279 (369)
T 3zwl_B 236 SSRDT--NSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGG 279 (369)
T ss_dssp EETTS--EEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEEC
T ss_pred ecCCc--eEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeec
Confidence 77664 78999998887655555 3445667788899887766543
No 233
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.36 E-value=7e-10 Score=116.34 Aligned_cols=258 Identities=14% Similarity=0.102 Sum_probs=138.2
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee--cc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE--AD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~--~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
..++|||||+ |+++ +..+ +...|++||+++|+.. .. .........++|+|||+.|+++...
T Consensus 43 ~~~a~spdg~-l~~~-~~~~-~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~------------- 106 (347)
T 3hfq_A 43 TYLALSAKDC-LYSV-DKED-DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH------------- 106 (347)
T ss_dssp CCEEECTTCE-EEEE-EEET-TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT-------------
T ss_pred ceEEEccCCe-EEEE-EecC-CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC-------------
Confidence 3688999999 5444 3322 2368999999888732 21 1112234679999999998887522
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEe--cCC-------CCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCC-CCCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWK--DPE-------HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS-ALPE 281 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~--~~~-------~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~-~~~~ 281 (732)
...+.+|++...... ..+.. ... .......++|||||+ +++.. ... ..++++++. ++.
T Consensus 107 -----~~~v~v~~~~~~g~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~-~~~---~~v~~~~~~~~g~- 174 (347)
T 3hfq_A 107 -----KGTAEVMKIAADGAL-TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID-LGS---DKVYVYNVSDAGQ- 174 (347)
T ss_dssp -----TTEEEEEEECTTSCE-EEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE-TTT---TEEEEEEECTTSC-
T ss_pred -----CCEEEEEEeCCCCCe-eecceeecCCCCCCccccCCCceEEEECCCCc-EEEEe-CCC---CEEEEEEECCCCc-
Confidence 235677776432211 11111 110 011345689999999 54433 222 357777876 321
Q ss_pred CcccccccCCCCCcEEeee--cccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceE---eccCCC----CCce
Q 004766 282 GLEGFKKRDGLLPFVKLID--GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFE---VIPEAE----RDVL 352 (732)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~--~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~---l~~~~~----~~~l 352 (732)
......+.. +.......|+|||+.+|+....+ ....++.++..++. ++. +..... ....
T Consensus 175 ----------~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-~~v~v~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~ 242 (347)
T 3hfq_A 175 ----------LSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS-SQIASLKYDTQTGA-FTQLGIVKTIPADYTAHNGA 242 (347)
T ss_dssp ----------EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-TEEEEEEEETTTTE-EEEEEEEESSCTTCCSCCEE
T ss_pred ----------EEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC-CEEEEEEecCCCCc-eEEeeeeeecCCCCCCCCcc
Confidence 000111111 11122236999999888765443 23345544443343 221 111111 1346
Q ss_pred eEEEEecCCE-EEEEEecCCeeEEEEEeCC-CCce--eeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 353 ESATAVNLNQ-MIVSYLSDVKYVLQIRDLK-NGSL--LHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 353 ~~~~~~~~~~-l~~~~~~~g~~~l~~~d~~-~g~~--~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
..+.++++++ |++....+ ..|.+|+++ +|+. +..+......+..+.+++|++.++++-. ....-.+|.+|..+
T Consensus 243 ~~i~~spdG~~l~v~~~~~--~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-~~~~v~v~~~d~~t 319 (347)
T 3hfq_A 243 AAIRLSHDGHFLYVSNRGY--NTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ-NTDNATLYARDLTS 319 (347)
T ss_dssp EEEEECTTSCEEEEEEETT--TEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET-TTTEEEEEEECTTT
T ss_pred eeEEECCCCCEEEEEeCCC--CEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc-CCCcEEEEEEeCCC
Confidence 6788888654 66665545 467778775 2332 2223222233557788999997765433 22334556668777
Q ss_pred CCCceEEEE
Q 004766 429 ETPEMKIFR 437 (732)
Q Consensus 429 ~~~~~~~l~ 437 (732)
++ ++.+.
T Consensus 320 g~--l~~~~ 326 (347)
T 3hfq_A 320 GK--LSLLQ 326 (347)
T ss_dssp CC--EEEEE
T ss_pred Ce--EEecc
Confidence 75 44443
No 234
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.36 E-value=2e-09 Score=113.19 Aligned_cols=251 Identities=12% Similarity=0.022 Sum_probs=158.8
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
..+..+.|||||++|+.... + ..|++||+.+++.+...........++|+||++.|+....+.
T Consensus 75 ~~v~~~~~~~~~~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~------------ 137 (369)
T 3zwl_B 75 GTIWSIDVDCFTKYCVTGSA-D----YSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNV------------ 137 (369)
T ss_dssp SCEEEEEECTTSSEEEEEET-T----TEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCB------------
T ss_pred CcEEEEEEcCCCCEEEEEeC-C----CeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCc------------
Confidence 34778999999999986642 2 379999999998654332333457899999999998876431
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEE---------ecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCW---------KDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEG 282 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~---------~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 282 (732)
......|.+|++.+......... ...........++|+|||++|+....+ ..|+++|+.+..
T Consensus 138 --~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~-- 208 (369)
T 3zwl_B 138 --MKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-----GKISKYDVSNNY-- 208 (369)
T ss_dssp --TTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-----SEEEEEETTTTT--
T ss_pred --cCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-----CEEEEEECCCCc--
Confidence 11234677777765432211111 111111145688999999998776533 348888987621
Q ss_pred cccccccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC
Q 004766 283 LEGFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN 361 (732)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~ 361 (732)
.....+....... ...|+|+++.|+..+. ...|..+|+.++.... .+.. ...+..+.+++++
T Consensus 209 ----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~~~-~~~~--~~~~~~~~~~~~~ 271 (369)
T 3zwl_B 209 ----------EYVDSIDLHEKSISDMQFSPDLTYFITSSR----DTNSFLVDVSTLQVLK-KYET--DCPLNTAVITPLK 271 (369)
T ss_dssp ----------EEEEEEECCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTCCEEE-EEEC--SSCEEEEEECSSS
T ss_pred ----------EeEEEEecCCCceeEEEECCCCCEEEEecC----CceEEEEECCCCceee-eecC--CCCceeEEecCCC
Confidence 1122222221111 2258899988876544 3468899998876333 3333 3567788888765
Q ss_pred EEEEEEecCC------------eeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 362 QMIVSYLSDV------------KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 362 ~l~~~~~~~g------------~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
..++....++ ...+.+||..+++.+..+..+.+.+..+.++++++.++ +.+. -..+..|++.++
T Consensus 272 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~---dg~v~iw~~~~~ 347 (369)
T 3zwl_B 272 EFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYA-SGGE---DGFIRLHHFEKS 347 (369)
T ss_dssp SEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEE-EEET---TSEEEEEEECHH
T ss_pred ceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEE-EEcC---CCeEEEEECccc
Confidence 5555544433 12789999988887666665677788899999988554 3332 357888887654
No 235
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.36 E-value=1e-09 Score=112.03 Aligned_cols=266 Identities=12% Similarity=0.141 Sum_probs=168.8
Q ss_pred CCcEEeCCEEEEEEEcCCCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCC--------
Q 004766 84 DAPFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGS-------- 155 (732)
Q Consensus 84 ~~p~~~g~~~~~~~~~~~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~-------- 155 (732)
.....+|+++||..... ...||+++..+...+.|.|-. .--++|+|++|.|+....+.
T Consensus 19 g~~~~~g~~iy~~n~~d---~~~ly~~~~dg~~~~~l~~~~-----------~~~i~~~g~~Iyy~~~~~~~~~~~~~~~ 84 (302)
T 3s25_A 19 GLFCESDGEVFFSNTND---NGRLYAMNIDGSNIHKLSNDT-----------AMYINADKNYVYYVRNNNQKITSQTFFS 84 (302)
T ss_dssp TCEEEETTEEEEEEGGG---TTEEEEEETTSCSCEEEEEEE-----------EEEEEECSSEEEEEEECC------CCSS
T ss_pred eEEEEeCCEEEEEeCCC---CceEEEEcCCCCCCEEccCCc-----------eeeEEEcCCEEEEEECCCCcccccceec
Confidence 34467899888875322 245999987555555555421 22468999999999876542
Q ss_pred -ceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeE
Q 004766 156 -DWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDIL 234 (732)
Q Consensus 156 -e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~ 234 (732)
....||.+++++++....... ....|+++|++|+|+.... .....||+.++.+... ..
T Consensus 85 ~n~~~Iy~i~~dg~~~~~l~~~----~~~~~s~~g~~Iy~~~~~~---------------~~~~~Iy~~~~dGs~~--~~ 143 (302)
T 3s25_A 85 YDRNSLCRIKRNGHGSTVLDPD----PCIYASLIGNYIYYLHYDT---------------QTATSLYRIRIDGEEK--KK 143 (302)
T ss_dssp CCSEEEEEEETTSCCCEEEECS----CEEEEEEETTEEEEEEESS---------------SSCEEEEEEETTSCCC--EE
T ss_pred cCCCeEEEEeCCCCcceEeecC----CccEEEEeCCEEEEEeecC---------------CCCceEEEEECCCCCe--EE
Confidence 247899999998874332221 3348999999999985211 1235799999976433 24
Q ss_pred EEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCC
Q 004766 235 CWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDT 314 (732)
Q Consensus 235 v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~ 314 (732)
|..... ..++++|++|+++.. + ...||+++++++. .+.+..+ .....+.|+|+
T Consensus 144 lt~~~~-------~~~~~~g~~iy~t~~-g---~~~Iy~~~l~g~~--------------~~~l~~~--~~~~~~~P~g~ 196 (302)
T 3s25_A 144 IKNHYL-------FTCNTSDRYFYYNNP-K---NGQLYRYDTASQS--------------EALFYDC--NCYKPVVLDDT 196 (302)
T ss_dssp EESSCC-------CCSEEETTEEEEECT-T---TCCEEEEETTTTE--------------EEEEECS--CEEEEEEEETT
T ss_pred EeCCCc-------eEeeEECCEEEEEeC-C---CceEEEEECCCCC--------------EEEEeCC--CccceeeecCC
Confidence 443211 356899999998854 2 3569999998742 2334332 12223568999
Q ss_pred eEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccc
Q 004766 315 VFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIG 394 (732)
Q Consensus 315 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g 394 (732)
.||+....+ .++|+++++++.. .+.|+.. .+..+.+.. +.|++.....+ ..|+.++++ |...++|...
T Consensus 197 ~iy~t~~~~--~~~I~~~~ldG~~-~~~Lt~~----~~~~~~~~g-~~Iy~~~~~~~-~~i~~~~~D-G~~r~~l~~~-- 264 (302)
T 3s25_A 197 NVYYMDVNR--DNAIVHVNINNPN-PVVLTEA----NIEHYNVYG-SLIFYQRGGDN-PALCVVKND-GTGFKELAKG-- 264 (302)
T ss_dssp EEEEEEGGG--TTEEEEECSSSCC-CEECSCS----CEEEEEEET-TEEEEEECSSS-CEEEEEETT-SCCCEEEEES--
T ss_pred EEEEEEcCC--CcEEEEEECCCCC-eEEEeCC----CcceEEECC-CEEEEEECCCC-cEEEEEECC-CCccEEeeCC--
Confidence 999865432 2789999999876 4555432 245555554 78877654443 789999997 6544566532
Q ss_pred eeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 395 SVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 395 ~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
.+.. .+..++.++++ .+.+. .+++..+..
T Consensus 265 ~~~~--i~i~~d~Iy~t--d~~~~-~i~~~~~dG 293 (302)
T 3s25_A 265 EFCN--INVTSQYVYFT--DFVSN-KEYCTSTQN 293 (302)
T ss_dssp CEEE--EEECSSEEEEE--ETTTC-CEEEEESSS
T ss_pred ccce--EEEeCCEEEEE--ECCCC-eEEEEECCC
Confidence 2223 34467777765 43333 488887653
No 236
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.05 E-value=6.3e-14 Score=143.82 Aligned_cols=120 Identities=18% Similarity=0.110 Sum_probs=81.6
Q ss_pred CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCc
Q 004766 460 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQ 539 (732)
Q Consensus 460 dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~ 539 (732)
+| .++.+... +..|+||++||..+... .|.. +...|. +||.|+++|+||.|.....-. ......
T Consensus 13 ~g-~~~~~~~~--------g~~p~vv~lHG~~~~~~--~~~~-~~~~l~-~g~~v~~~D~~G~G~s~~~~~---~~~~~~ 76 (304)
T 3b12_A 13 GD-VTINCVVG--------GSGPALLLLHGFPQNLH--MWAR-VAPLLA-NEYTVVCADLRGYGGSSKPVG---APDHAN 76 (304)
Confidence 67 67665432 35688999999877543 3333 345677 899999999999876433210 000122
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCccc
Q 004766 540 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 597 (732)
Q Consensus 540 ~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d 597 (732)
.+++++.+.+..+++. .+.+++.++|+|+||.++..++.++|++++++|+..|...
T Consensus 77 ~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (304)
T 3b12_A 77 YSFRAMASDQRELMRT--LGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPT 132 (304)
Confidence 3444454444444433 2346899999999999999999999999999998887654
No 237
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.35 E-value=9e-10 Score=114.49 Aligned_cols=247 Identities=10% Similarity=-0.003 Sum_probs=145.2
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCce-ecccccceeeee-EEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV-EADALSWFKFSS-IAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~-~~~~~~~~~~~~-~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
.+.|||||++|+++.... ..|+++|+++++. ............ ++|+|||+.|+ +....
T Consensus 44 ~~~~s~dg~~l~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~-------------- 104 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFC----QTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV-TVTGL-------------- 104 (331)
T ss_dssp EEEECSSSCEEEEEESTT----CEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-ECCCS--------------
T ss_pred eEEEcCCCCEEEEEeCCC----CeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-EecCC--------------
Confidence 789999999877665322 3899999999885 322222222345 99999999988 42211
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 293 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 293 (732)
.....|+++++.++... ..+.... ....++|||||++|++...... ..++++++..... +. ..
T Consensus 105 -~~~~~i~v~d~~~~~~~--~~~~~~~---~~~~~~~spdg~~l~~~~~~~~---~~i~~~~~~~~g~-~~-------~~ 167 (331)
T 3u4y_A 105 -NHPFNMQSYSFLKNKFI--STIPIPY---DAVGIAISPNGNGLILIDRSSA---NTVRRFKIDADGV-LF-------DT 167 (331)
T ss_dssp -SSSCEEEEEETTTTEEE--EEEECCT---TEEEEEECTTSSCEEEEEETTT---TEEEEEEECTTCC-EE-------EE
T ss_pred -CCcccEEEEECCCCCeE--EEEECCC---CccceEECCCCCEEEEEecCCC---ceEEEEEECCCCc-Ee-------ec
Confidence 12237999998765321 2222222 2357899999999877654322 2255555543110 00 00
Q ss_pred CcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCC---ceEeccCCCCCceeEEEEecCCE-EEEEEec
Q 004766 294 PFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND---WFEVIPEAERDVLESATAVNLNQ-MIVSYLS 369 (732)
Q Consensus 294 ~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~---~~~l~~~~~~~~l~~~~~~~~~~-l~~~~~~ 369 (732)
....+..+.......|+|||+.+|+.... ...|..+|+++++. ... ++.. .....+.+++++. +++...
T Consensus 168 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~~~~~~~~-~~~~--~~~~~~~~spdg~~l~v~~~- 240 (331)
T 3u4y_A 168 GQEFISGGTRPFNITFTPDGNFAFVANLI---GNSIGILETQNPENITLLNA-VGTN--NLPGTIVVSRDGSTVYVLTE- 240 (331)
T ss_dssp EEEEECSSSSEEEEEECTTSSEEEEEETT---TTEEEEEECSSTTSCEEEEE-EECS--SCCCCEEECTTSSEEEEECS-
T ss_pred CCccccCCCCccceEECCCCCEEEEEeCC---CCeEEEEECCCCcccceeee-ccCC--CCCceEEECCCCCEEEEEEc-
Confidence 00111112222233589999988876543 34788999987763 333 3332 4456788888655 554433
Q ss_pred CCeeEEEEEeCCCCce--eeecc----ccc---ceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 370 DVKYVLQIRDLKNGSL--LHQLP----IEI---GSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~~--~~~l~----~~~---g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+...|+++|+++|+. +..+. ... .....+.+++|++.++++... -..+..+|+.+.
T Consensus 241 -~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~ 305 (331)
T 3u4y_A 241 -STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI---SRELKVFTISGK 305 (331)
T ss_dssp -SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT---TTEEEEEETTSC
T ss_pred -CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCC---CCcEEEEEecCC
Confidence 346799999987765 12111 111 112346788999988765432 357888898755
No 238
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.35 E-value=3.4e-10 Score=121.91 Aligned_cols=242 Identities=12% Similarity=0.036 Sum_probs=157.8
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...+..+.|||||++|+-.. ...+|+|||+++|+...... .......++|+|||+.|+....+.
T Consensus 108 ~~~V~~~~~~p~~~~l~s~s-----~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~---------- 172 (410)
T 1vyh_C 108 RSPVTRVIFHPVFSVMVSAS-----EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADM---------- 172 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEE-----SSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTS----------
T ss_pred CCcEEEEEEcCCCCEEEEEe-----CCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCC----------
Confidence 34577899999999887553 22479999999987543211 111347899999999887765433
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
.|.+|++.+.. ++.....+...+..+.|+|+|++|+..+.+ ..+.++|+.++.
T Consensus 173 ---------~i~iwd~~~~~----~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~--------- 225 (410)
T 1vyh_C 173 ---------TIKLWDFQGFE----CIRTMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGY--------- 225 (410)
T ss_dssp ---------CCCEEETTSSC----EEECCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCC---------
T ss_pred ---------eEEEEeCCCCc----eeEEEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCc---------
Confidence 46778876542 232222334456789999999998765533 348888987742
Q ss_pred CCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC--------
Q 004766 290 DGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-------- 360 (732)
Q Consensus 290 ~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-------- 360 (732)
+...+....... ...++++|..|+..+.. ..|..+|+.++.....+..+. ..+..+.+.++
T Consensus 226 ----~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D----~~v~vwd~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~~~~ 295 (410)
T 1vyh_C 226 ----CVKTFTGHREWVRMVRPNQDGTLIASCSND----QTVRVWVVATKECKAELREHR--HVVECISWAPESSYSSISE 295 (410)
T ss_dssp ----EEEEEECCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCCEEEEECCCS--SCEEEEEECCSCGGGGGGG
T ss_pred ----EEEEEeCCCccEEEEEECCCCCEEEEEcCC----CeEEEEECCCCceeeEecCCC--ceEEEEEEcCcccccchhh
Confidence 122332221111 12477888766654432 357888888776334444443 56777777763
Q ss_pred ------------CEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 361 ------------NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 361 ------------~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+.++++...++ .|++||+.+|+.+..+..+...|..+.+++++..++ +.+. -..+..||+.+
T Consensus 296 ~~~~~~~~~~~~g~~l~sgs~D~--~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~-s~s~---D~~i~vwd~~~ 369 (410)
T 1vyh_C 296 ATGSETKKSGKPGPFLLSGSRDK--TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCAD---DKTLRVWDYKN 369 (410)
T ss_dssp CCSCC-------CCEEEEEETTS--EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEE-EEET---TTEEEEECCTT
T ss_pred hccccccccCCCCCEEEEEeCCC--eEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEE-EEeC---CCeEEEEECCC
Confidence 34677777774 699999988887666665566788888899988655 3332 35788999877
Q ss_pred CC
Q 004766 429 ET 430 (732)
Q Consensus 429 ~~ 430 (732)
++
T Consensus 370 ~~ 371 (410)
T 1vyh_C 370 KR 371 (410)
T ss_dssp SC
T ss_pred Cc
Confidence 64
No 239
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.35 E-value=5.9e-10 Score=115.79 Aligned_cols=234 Identities=14% Similarity=0.005 Sum_probs=150.6
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce--ec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV--EA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~--~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
..+..+.|||||++|+.... ...|++||+.+++. .. ..........++|+||++.|+....+
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------- 162 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGE-----ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD---------- 162 (337)
T ss_dssp SBEEEEEECTTSSEEEEEES-----SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT----------
T ss_pred CcEEEEEEcCCCCEEEEEcC-----CCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC----------
Confidence 34778999999999987642 24799999998872 21 11111224789999999988877533
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
..|++|++.++. .+.....+......+.|+|||++|+....+ ..++++|+.++.
T Consensus 163 ---------g~v~~~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~-------- 216 (337)
T 1gxr_A 163 ---------GNIAVWDLHNQT----LVRQFQGHTDGASCIDISNDGTKLWTGGLD-----NTVRSWDLREGR-------- 216 (337)
T ss_dssp ---------SCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTE--------
T ss_pred ---------CcEEEEeCCCCc----eeeeeecccCceEEEEECCCCCEEEEEecC-----CcEEEEECCCCc--------
Confidence 258889987653 222222233456789999999998876532 348888987642
Q ss_pred cCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 289 RDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 289 ~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
....+..........|+|+|+.+++.+.. ..|..+|+.++. ...+..+. ..+..+.+++++.+++...
T Consensus 217 -----~~~~~~~~~~v~~~~~s~~~~~l~~~~~~----~~i~~~~~~~~~-~~~~~~~~--~~v~~~~~~~~~~~l~~~~ 284 (337)
T 1gxr_A 217 -----QLQQHDFTSQIFSLGYCPTGEWLAVGMES----SNVEVLHVNKPD-KYQLHLHE--SCVLSLKFAYCGKWFVSTG 284 (337)
T ss_dssp -----EEEEEECSSCEEEEEECTTSSEEEEEETT----SCEEEEETTSSC-EEEECCCS--SCEEEEEECTTSSEEEEEE
T ss_pred -----eEeeecCCCceEEEEECCCCCEEEEEcCC----CcEEEEECCCCC-eEEEcCCc--cceeEEEECCCCCEEEEec
Confidence 11122111111223588999888765543 358889988776 34444443 5688899998767777777
Q ss_pred cCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEE
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCN 425 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d 425 (732)
.++ .|++|++.+++.+.... ....+..+.++++++.++.... -..++.|+
T Consensus 285 ~dg--~i~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~----dg~i~iw~ 334 (337)
T 1gxr_A 285 KDN--LLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSG----DKKATVYE 334 (337)
T ss_dssp TTS--EEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEET----TSCEEEEE
T ss_pred CCC--cEEEEECCCCeEEEEec-CCCcEEEEEECCCCCEEEEecC----CCeEEEEE
Confidence 774 78999998777643322 3556778888999886654332 23455555
No 240
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.34 E-value=4.9e-10 Score=122.30 Aligned_cols=245 Identities=11% Similarity=0.087 Sum_probs=153.5
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECC--CCceeccc---ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIE--DQIVEADA---LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~--~g~~~~~~---~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
.+..++|||||++|+++.+.+ ..|++||+. +++.+... ........++|+|||+.|+....
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---------- 169 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSD----KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK---------- 169 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGG----TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET----------
T ss_pred ceEEEEEcCCCCEEEEEECCC----CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC----------
Confidence 477899999999986665433 379999998 77654321 11123478999999999988753
Q ss_pred CCCcccCCcccEEEEEECCCCCCCC--eEEEecCCCCeeEEEeEEecC---CcEEEEEEecCCcceEEEEEEeCCCCCCC
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSED--ILCWKDPEHPKYIFSGHVTED---GQYLVMCIEENCDPVNKVYYCDLSALPEG 282 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~--~~v~~~~~~~~~~~~~~~SpD---g~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 282 (732)
...++.+++.++.... ...+.. +...+..+.|+|| |++|+....+ ..|+++|+.++.
T Consensus 170 ---------~g~v~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~~~-- 231 (450)
T 2vdu_B 170 ---------FGDVYSIDINSIPEEKFTQEPILG--HVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQCF-- 231 (450)
T ss_dssp ---------TSEEEEEETTSCCCSSCCCCCSEE--CSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESCTT--
T ss_pred ---------CCcEEEEecCCcccccccceeeec--ccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCCCc--
Confidence 2368889887654321 001111 2234668999999 8888766543 237788877632
Q ss_pred cccccccCCCCCcEEeeecccce--EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccC--------------
Q 004766 283 LEGFKKRDGLLPFVKLIDGFDAQ--YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPE-------------- 346 (732)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~--~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~-------------- 346 (732)
....+..+.... ...|+ +|+.|+..+. ...|..+|+.++.....+..+
T Consensus 232 -----------~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~----d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (450)
T 2vdu_B 232 -----------IVDKWLFGHKHFVSSICCG-KDYLLLSAGG----DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAP 295 (450)
T ss_dssp -----------CEEEECCCCSSCEEEEEEC-STTEEEEEES----SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-
T ss_pred -----------eeeeeecCCCCceEEEEEC-CCCEEEEEeC----CCeEEEEECCCCcEeeeecchhhhhhhhhhccccc
Confidence 122222222221 22478 8887776543 347899999887633333210
Q ss_pred ---------CCCCceeEEEEecCCEEEEEEe-cCCeeEEEEEeC--CCC---ceeeecccccceeeEeecccCCcEEEEE
Q 004766 347 ---------AERDVLESATAVNLNQMIVSYL-SDVKYVLQIRDL--KNG---SLLHQLPIEIGSVNAISARREDSVVFIS 411 (732)
Q Consensus 347 ---------~~~~~l~~~~~~~~~~l~~~~~-~~g~~~l~~~d~--~~g---~~~~~l~~~~g~v~~~~~s~d~~~l~~~ 411 (732)
.....+..+.+++++.+++... .+ ..|++|++ .++ +.+..+..+ +.+..+.++++ .++++
T Consensus 296 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d--~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~--~~~v~ 370 (450)
T 2vdu_B 296 PRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT--KCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHND--EFQVT 370 (450)
T ss_dssp ---------CBCCCEEEEEECSSSSEEEEEETTC--SEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETT--EEEEE
T ss_pred ccccccccccceEEEEEEEEeCCCCEEEEEECCC--CeEEEEEeccCCCCceeeccEeccC-CceEEEEecCC--cEEEE
Confidence 1124577888887655554444 55 46888888 444 333444444 56777888773 57778
Q ss_pred EecCCCCc------eEEEEECCCCC
Q 004766 412 FTSFLIPG------IVYQCNLKTET 430 (732)
Q Consensus 412 ~ss~~~p~------~~y~~d~~~~~ 430 (732)
..+...|. .+|.++..+++
T Consensus 371 ~~~~~~~~~~~~~i~v~~~~~~~~~ 395 (450)
T 2vdu_B 371 LDNKESSGVQKNFAKFIEYNLNENS 395 (450)
T ss_dssp ECCTTCCSSCCCSEEEEEEETTTTE
T ss_pred EecccCCCCCCcceEEEEEEcCCCe
Confidence 88877775 89999887763
No 241
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.34 E-value=2.6e-10 Score=129.69 Aligned_cols=241 Identities=8% Similarity=-0.058 Sum_probs=155.1
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
.+.|||||++||+.. +. .+++||+.+++.... .........++|||||+.|+....+
T Consensus 23 ~~~~spdg~~l~~~~---~~---~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d---------------- 80 (611)
T 1nr0_A 23 VLGNTPAGDKIQYCN---GT---SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH---------------- 80 (611)
T ss_dssp CCEECTTSSEEEEEE---TT---EEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETT----------------
T ss_pred EEeeCCCCCEEEeCC---CC---EEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCC----------------
Confidence 567999999999874 22 789999987764321 1112234789999999999877543
Q ss_pred CcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCC
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLP 294 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 294 (732)
..|.+|++.++... +......+...+..++|||||++|+....... ....++++|....
T Consensus 81 ---~~v~lWd~~~~~~~--~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~-~~~~v~~wd~~~~--------------- 139 (611)
T 1nr0_A 81 ---GNVRIWDTTQTTHI--LKTTIPVFSGPVKDISWDSESKRIAAVGEGRE-RFGHVFLFDTGTS--------------- 139 (611)
T ss_dssp ---SEEEEEESSSTTCC--EEEEEECSSSCEEEEEECTTSCEEEEEECCSS-CSEEEEETTTCCB---------------
T ss_pred ---CCEEEeECCCCcce--eeEeecccCCceEEEEECCCCCEEEEEECCCC-ceeEEEEeeCCCC---------------
Confidence 36889998654332 22222222345678999999999987664322 2356888774321
Q ss_pred cEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCee
Q 004766 295 FVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKY 373 (732)
Q Consensus 295 ~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~ 373 (732)
...+....... ...|+|++...++....+ ..+..+|..+.+....+..+. ..+..+.+++++.++++...|+
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D---~~v~lwd~~~~~~~~~l~~H~--~~V~~v~fspdg~~las~s~D~-- 212 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDD---NTVAIFEGPPFKFKSTFGEHT--KFVHSVRYNPDGSLFASTGGDG-- 212 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETT---SCEEEEETTTBEEEEEECCCS--SCEEEEEECTTSSEEEEEETTS--
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCC---CeEEEEECCCCeEeeeecccc--CceEEEEECCCCCEEEEEECCC--
Confidence 11122111111 224899887544443332 357777876654233444443 5688999998778888888885
Q ss_pred EEEEEeCCCCceeeecc-------cccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 374 VLQIRDLKNGSLLHQLP-------IEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 374 ~l~~~d~~~g~~~~~l~-------~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.|++||+.+|+....+. .+.+.|..+.++|++..++ +.+. -..+..+|+.+++
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-s~s~---D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA-SASA---DKTIKIWNVATLK 272 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE-EEET---TSEEEEEETTTTE
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEE-EEeC---CCeEEEEeCCCCc
Confidence 68899988787655553 2456788899999998654 3332 2578899998774
No 242
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.34 E-value=7.2e-10 Score=118.65 Aligned_cols=240 Identities=16% Similarity=0.072 Sum_probs=145.7
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccccc-------------------ceeeeeEEEEeCCcEEEE
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALS-------------------WFKFSSIAWTHDSKGFFY 194 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~-------------------~~~~~~~~WspDg~~l~y 194 (732)
+..++|||||++||...+ ..+++|++.+|+.+..... ......++|+|||+.|+.
T Consensus 67 V~~v~fspdg~~la~g~~------~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 67 VCCVKFSNDGEYLATGCN------KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp CCEEEECTTSSEEEEECB------SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCCEEEEEcC------CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 458899999999997532 2688999998875321100 001367999999999887
Q ss_pred EEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEE
Q 004766 195 SRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYC 274 (732)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~ 274 (732)
...+ ..|++|++.++.. +..+. .+...+..++|+|||++|+..+.+ ..+.++
T Consensus 141 ~~~d-------------------~~i~iwd~~~~~~--~~~~~--~h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iw 192 (393)
T 1erj_A 141 GAED-------------------RLIRIWDIENRKI--VMILQ--GHEQDIYSLDYFPSGDKLVSGSGD-----RTVRIW 192 (393)
T ss_dssp EETT-------------------SCEEEEETTTTEE--EEEEC--CCSSCEEEEEECTTSSEEEEEETT-----SEEEEE
T ss_pred EcCC-------------------CeEEEEECCCCcE--EEEEc--cCCCCEEEEEEcCCCCEEEEecCC-----CcEEEE
Confidence 6533 3588999876531 22332 233456789999999998765533 347788
Q ss_pred eCCCCCCCcccccccCCCCCcEEeeecccceEEEEEe-cCCeEEEEeCCCCCCceEEEEeCCCCCCceEecc-----CCC
Q 004766 275 DLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIP-----EAE 348 (732)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~-----~~~ 348 (732)
|+.++.. ...+..........|+| +|+.|+..+. ...|..+|+.++.....+.. ...
T Consensus 193 d~~~~~~-------------~~~~~~~~~v~~~~~~~~~~~~l~~~s~----d~~v~iwd~~~~~~~~~~~~~~~~~~~h 255 (393)
T 1erj_A 193 DLRTGQC-------------SLTLSIEDGVTTVAVSPGDGKYIAAGSL----DRAVRVWDSETGFLVERLDSENESGTGH 255 (393)
T ss_dssp ETTTTEE-------------EEEEECSSCEEEEEECSTTCCEEEEEET----TSCEEEEETTTCCEEEEEC------CCC
T ss_pred ECCCCee-------------EEEEEcCCCcEEEEEECCCCCEEEEEcC----CCcEEEEECCCCcEEEeecccccCCCCC
Confidence 9877421 11222111112234788 6766665443 23577888887652233311 111
Q ss_pred CCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCcee------------eecccccceeeEeecccCCcEEEEEEecCC
Q 004766 349 RDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLL------------HQLPIEIGSVNAISARREDSVVFISFTSFL 416 (732)
Q Consensus 349 ~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~------------~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~ 416 (732)
...+..+.+++++.++++...++ .|.+||+.++... ..+..+...+..+.+++++..++ +.+.
T Consensus 256 ~~~v~~v~~~~~g~~l~s~s~d~--~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-sgs~-- 330 (393)
T 1erj_A 256 KDSVYSVVFTRDGQSVVSGSLDR--SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYIL-SGSK-- 330 (393)
T ss_dssp SSCEEEEEECTTSSEEEEEETTS--EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEE-EEET--
T ss_pred CCCEEEEEECCCCCEEEEEeCCC--EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEE-EEeC--
Confidence 25678899998777778887774 6888888643221 11222234566777888887554 3332
Q ss_pred CCceEEEEECCCCC
Q 004766 417 IPGIVYQCNLKTET 430 (732)
Q Consensus 417 ~p~~~y~~d~~~~~ 430 (732)
-..++.+|+.+++
T Consensus 331 -D~~v~iwd~~~~~ 343 (393)
T 1erj_A 331 -DRGVLFWDKKSGN 343 (393)
T ss_dssp -TSEEEEEETTTCC
T ss_pred -CCeEEEEECCCCe
Confidence 3578999998875
No 243
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.33 E-value=1.1e-12 Score=134.10 Aligned_cols=102 Identities=13% Similarity=0.110 Sum_probs=75.0
Q ss_pred ccEEEEEcCC--CCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 481 HPCLLYGYGG--FNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 481 ~P~vv~~hG~--~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
.|+||++||. .+.. ..|.. +...|. +||.|+++|+||.|... .......+++++.+.+..+++.-
T Consensus 41 ~p~vv~lHG~G~~~~~--~~~~~-~~~~L~-~~~~vi~~D~~G~G~S~-------~~~~~~~~~~~~~~~l~~~l~~~-- 107 (292)
T 3l80_A 41 NPCFVFLSGAGFFSTA--DNFAN-IIDKLP-DSIGILTIDAPNSGYSP-------VSNQANVGLRDWVNAILMIFEHF-- 107 (292)
T ss_dssp SSEEEEECCSSSCCHH--HHTHH-HHTTSC-TTSEEEEECCTTSTTSC-------CCCCTTCCHHHHHHHHHHHHHHS--
T ss_pred CCEEEEEcCCCCCcHH--HHHHH-HHHHHh-hcCeEEEEcCCCCCCCC-------CCCcccccHHHHHHHHHHHHHHh--
Confidence 4899999973 2221 13332 345566 79999999999988643 11223356788887777777652
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
..+++.++|+|+||.++..++.++|++++++|+..|.
T Consensus 108 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 144 (292)
T 3l80_A 108 KFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPT 144 (292)
T ss_dssp CCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCC
T ss_pred CCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCC
Confidence 3458999999999999999999999999999988853
No 244
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.33 E-value=1.3e-09 Score=118.04 Aligned_cols=245 Identities=11% Similarity=0.009 Sum_probs=156.1
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...+..+.|+|||+.++-.. ....|++||+++++.+.... .......++|+|||+.++++..
T Consensus 169 ~~~v~~~~~~~~~~~~~s~~-----~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------ 231 (433)
T 3bws_A 169 LGFVETISIPEHNELWVSQM-----QANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNW------------ 231 (433)
T ss_dssp CCEEEEEEEGGGTEEEEEEG-----GGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEET------------
T ss_pred CCceeEEEEcCCCEEEEEEC-----CCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEec------------
Confidence 34577889999998665432 22479999999987543221 1223478999999998887742
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCc---ceEEEEEEeCCCCCCCcccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCD---PVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~---~~~~l~~~d~~~~~~~~~~~ 286 (732)
....|++|++.++. .+..... ......++|+|||++|++....... ....|+++|+.++.
T Consensus 232 ------~~~~i~~~d~~~~~----~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~------ 294 (433)
T 3bws_A 232 ------ISEDISVIDRKTKL----EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK------ 294 (433)
T ss_dssp ------TTTEEEEEETTTTE----EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE------
T ss_pred ------CCCcEEEEECCCCc----EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc------
Confidence 23468999987653 2222222 2345689999999999877643321 14579999988642
Q ss_pred cccCCCCCcEEeee-cccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCE-EE
Q 004766 287 KKRDGLLPFVKLID-GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MI 364 (732)
Q Consensus 287 ~~~~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~-l~ 364 (732)
...... ........|+|+|+.+++.... ...|..+|+.+++ ....++.. ..+..+.+++++. ++
T Consensus 295 --------~~~~~~~~~~~~~~~~~~~g~~l~~~~~~---~~~v~v~d~~~~~-~~~~~~~~--~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 295 --------LIDTIGPPGNKRHIVSGNTENKIYVSDMC---CSKIEVYDLKEKK-VQKSIPVF--DKPNTIALSPDGKYLY 360 (433)
T ss_dssp --------EEEEEEEEECEEEEEECSSTTEEEEEETT---TTEEEEEETTTTE-EEEEEECS--SSEEEEEECTTSSEEE
T ss_pred --------EEeeccCCCCcceEEECCCCCEEEEEecC---CCEEEEEECCCCc-EEEEecCC--CCCCeEEEcCCCCEEE
Confidence 111221 1112223589999888876554 3479999998765 23334433 4567889988654 55
Q ss_pred EEEecCCe------------eEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 365 VSYLSDVK------------YVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 365 ~~~~~~g~------------~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
+....+.. ..|++||+.+++.+..+.. ...+..+.++++++.++++.+. -..++.|++.
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~---d~~i~v~~~~ 431 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFL---DHQIRVYRRD 431 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETT---TTEEEEEEET
T ss_pred EEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECC---CCeEEEEEec
Confidence 55443321 3899999988877555553 3456678889999877654321 2467676653
No 245
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.33 E-value=6e-10 Score=115.86 Aligned_cols=242 Identities=12% Similarity=0.078 Sum_probs=144.9
Q ss_pred EEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCC
Q 004766 137 VSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSN 215 (732)
Q Consensus 137 ~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~ 215 (732)
..++++++++..+...+ .+|+++|+++|+.+... ...... .++|+|||+.|+++..
T Consensus 3 ~~~~~~~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~------------------ 59 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHL----RRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSD------------------ 59 (331)
T ss_dssp ----CCCCEEEEEEGGG----TEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEES------------------
T ss_pred eeEcCCCCEEEEEecCC----CeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeC------------------
Confidence 45778887666554322 38999999999864322 222233 8999999998887753
Q ss_pred cccEEEEEECCCCCCCCeEEEecCCCCeeEEE-eEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCC
Q 004766 216 LYHEFYYHFLGTKQSEDILCWKDPEHPKYIFS-GHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLP 294 (732)
Q Consensus 216 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~-~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 294 (732)
....|+.+++.++... .........+ .. +++||||++|+ ...... ....|+++|+.++. .
T Consensus 60 ~~~~i~~~d~~~~~~~-~~~~~~~~~~---~~~~~~s~dg~~l~-~~~~~~-~~~~i~v~d~~~~~-------------~ 120 (331)
T 3u4y_A 60 FCQTLVQIETQLEPPK-VVAIQEGQSS---MADVDITPDDQFAV-TVTGLN-HPFNMQSYSFLKNK-------------F 120 (331)
T ss_dssp TTCEEEEEECSSSSCE-EEEEEECSSC---CCCEEECTTSSEEE-ECCCSS-SSCEEEEEETTTTE-------------E
T ss_pred CCCeEEEEECCCCcee-EEecccCCCC---ccceEECCCCCEEE-EecCCC-CcccEEEEECCCCC-------------e
Confidence 2237999999876431 1222222222 24 88999999998 332221 12379999988742 1
Q ss_pred cEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCc----eEeccCCCCCceeEEEEecCCE-EEEEEec
Q 004766 295 FVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW----FEVIPEAERDVLESATAVNLNQ-MIVSYLS 369 (732)
Q Consensus 295 ~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~----~~l~~~~~~~~l~~~~~~~~~~-l~~~~~~ 369 (732)
...+..+.......|+|||+.+|+....+. . .|..++++..... ..+++.. .....+.+++++. +++....
T Consensus 121 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~-~i~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~~ 196 (331)
T 3u4y_A 121 ISTIPIPYDAVGIAISPNGNGLILIDRSSA-N-TVRRFKIDADGVLFDTGQEFISGG--TRPFNITFTPDGNFAFVANLI 196 (331)
T ss_dssp EEEEECCTTEEEEEECTTSSCEEEEEETTT-T-EEEEEEECTTCCEEEEEEEEECSS--SSEEEEEECTTSSEEEEEETT
T ss_pred EEEEECCCCccceEECCCCCEEEEEecCCC-c-eEEEEEECCCCcEeecCCccccCC--CCccceEECCCCCEEEEEeCC
Confidence 222222222233469999998876654322 2 1444554433211 2223322 3467788888654 6666554
Q ss_pred CCeeEEEEEeCCCCce---eeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 370 DVKYVLQIRDLKNGSL---LHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~~---~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+ ..|++||+++++. +..+..+ ..+..+.+++|++.++++.. ....++.+|+.+++
T Consensus 197 ~--~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~---~~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 197 G--NSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTE---STVDVFNFNQLSGT 254 (331)
T ss_dssp T--TEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECS---SEEEEEEEETTTTE
T ss_pred C--CeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEc---CCCEEEEEECCCCc
Confidence 4 4799999988876 4555432 34456788999997776533 34569999998884
No 246
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.33 E-value=3.2e-09 Score=109.43 Aligned_cols=226 Identities=13% Similarity=0.065 Sum_probs=144.9
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+..+.|||||++|+.... ...|++||+.+++.+.... .......++|+||++.|+....+
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~-----d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------------ 128 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASD-----DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD------------ 128 (312)
T ss_dssp SCEEEEEECTTSSEEEEEET-----TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT------------
T ss_pred CceEEEEEcCCCCEEEEECC-----CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC------------
Confidence 34778999999999886642 2479999999988543221 11224678999999988876533
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
..|++|++.++.. +.....+...+..+.|+|||++|+....++ .|.++|+.++.
T Consensus 129 -------~~i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~---------- 182 (312)
T 4ery_A 129 -------ESVRIWDVKTGKC----LKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASGQ---------- 182 (312)
T ss_dssp -------SCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCC----------
T ss_pred -------CcEEEEECCCCEE----EEEecCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCc----------
Confidence 3588999876532 222222333466899999999987665433 37888987642
Q ss_pred CCCCcEEeeecccc--eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEe-cCCEEEEEE
Q 004766 291 GLLPFVKLIDGFDA--QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAV-NLNQMIVSY 367 (732)
Q Consensus 291 ~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~-~~~~l~~~~ 367 (732)
....+...... ....|+|+|+.|+..+. ...|..+|+.++.....+..+..........+. +++.++++.
T Consensus 183 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg 255 (312)
T 4ery_A 183 ---CLKTLIDDDNPPVSFVKFSPNGKYILAATL----DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSG 255 (312)
T ss_dssp ---EEEEECCSSCCCEEEEEECTTSSEEEEEET----TTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEEC
T ss_pred ---eeeEEeccCCCceEEEEECCCCCEEEEEcC----CCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEE
Confidence 12222222221 12358999988776544 346888998877633444443322211122333 346677777
Q ss_pred ecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEE
Q 004766 368 LSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVF 409 (732)
Q Consensus 368 ~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~ 409 (732)
..++ .|++||+.+++.+..+..+...+..+.++|+++.++
T Consensus 256 ~~dg--~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 295 (312)
T 4ery_A 256 SEDN--LVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 295 (312)
T ss_dssp CTTS--CEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred CCCC--EEEEEECCCchhhhhhhccCCcEEEEeecCcCCceE
Confidence 7774 689999988877677766666677888899888654
No 247
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.33 E-value=1.8e-09 Score=120.48 Aligned_cols=287 Identities=11% Similarity=0.059 Sum_probs=164.8
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEEC--CCCceecccccceeeeeEEEEe----CCcEEEEEEecCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRI--EDQIVEADALSWFKFSSIAWTH----DSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl--~~g~~~~~~~~~~~~~~~~Wsp----Dg~~l~y~~~~~~~~~~~~~ 207 (732)
...+.+||||++|+.+. .+ .+|++||+ .+++.+.....+....+++||| ||++|+....
T Consensus 181 ~~~v~~spdg~~l~v~~-~d----~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~---------- 245 (543)
T 1nir_A 181 VHISRMSASGRYLLVIG-RD----ARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAY---------- 245 (543)
T ss_dssp EEEEEECTTSCEEEEEE-TT----SEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE----------
T ss_pred cceEEECCCCCEEEEEC-CC----CeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEc----------
Confidence 45788999999886553 22 37999999 7887554322233347899999 9999887643
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecC----C-----CCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDP----E-----HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~----~-----~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
.+..|.+++..+..... .+... + .......+.+|||++.+++.... ...|+++|..+
T Consensus 246 --------~~~~v~v~D~~t~~~~~--~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~----~g~i~vvd~~~ 311 (543)
T 1nir_A 246 --------WPPQFAIMDGETLEPKQ--IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE----TGKVLLVNYKD 311 (543)
T ss_dssp --------ESSEEEEEETTTCCEEE--EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT----TTEEEEEECTT
T ss_pred --------cCCeEEEEeccccccce--eecccCcccCccccccCCceEEEEECCCCCEEEEEECC----CCeEEEEEecC
Confidence 23467788877654221 11110 0 01134578899999988766532 35699999876
Q ss_pred CCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCC-CCceeEEE-
Q 004766 279 LPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE-RDVLESAT- 356 (732)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~l~~~~- 356 (732)
... .....+..+....-..|+|||++|+...+. ...|.++|+++++ ....++... .+.-.++.
T Consensus 312 ~~~-----------l~~~~i~~~~~~~~~~~spdg~~l~va~~~---~~~v~v~D~~tg~-l~~~i~~g~~ph~g~g~~~ 376 (543)
T 1nir_A 312 IDN-----------LTVTSIGAAPFLHDGGWDSSHRYFMTAANN---SNKVAVIDSKDRR-LSALVDVGKTPHPGRGANF 376 (543)
T ss_dssp SSS-----------CEEEEEECCSSCCCEEECTTSCEEEEEEGG---GTEEEEEETTTTE-EEEEEECSSSBCCTTCEEE
T ss_pred CCc-----------ceeEEeccCcCccCceECCCCCEEEEEecC---CCeEEEEECCCCe-EEEeeccCCCCCCCCCccc
Confidence 321 001122111111123589999988765543 2368889998876 232232110 01101222
Q ss_pred EecC-CEEEEEEecCCeeEEEEEeCCC-------CceeeecccccceeeEeecccCCcEEEEEEecCCCC-----ceEEE
Q 004766 357 AVNL-NQMIVSYLSDVKYVLQIRDLKN-------GSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIP-----GIVYQ 423 (732)
Q Consensus 357 ~~~~-~~l~~~~~~~g~~~l~~~d~~~-------g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p-----~~~y~ 423 (732)
+.++ +.++++.. .+...|.+||.++ ++.++.|..+.+.+..+.++|+++.|++.. ...| .++.+
T Consensus 377 ~~p~~g~~~~s~~-~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~--~~~~~~~~~~~v~v 453 (543)
T 1nir_A 377 VHPKYGPVWSTSH-LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT--TFNPDARISQSVAV 453 (543)
T ss_dssp EETTTEEEEEEEB-SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC--TTCSSHHHHTCEEE
T ss_pred CCCCCccEEEecc-CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec--CCCCCcccCceEEE
Confidence 2444 45655543 2335799999987 666677776544444678899999887532 2233 48999
Q ss_pred EECCCCCCceEEEEeecCCCCCCCCceEEEEEEEccCCCeeEEEEE
Q 004766 424 CNLKTETPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFI 469 (732)
Q Consensus 424 ~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dG~~~i~~~~ 469 (732)
+|..+++...+.+.-....++....-.+..+.| ++|| .+|-...
T Consensus 454 ~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~g-~~~~~s~ 497 (543)
T 1nir_A 454 FDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEY-NKRG-DEVWFSV 497 (543)
T ss_dssp EETTCTTSCCEEECHHHHHCCCSSCCEEEEEEE-CSSS-SEEEEEE
T ss_pred EECCCCCCCeEEeechhhcccCCCCCceEeccC-CCCC-CEEEEEe
Confidence 999988632233321111112221224455555 4677 6665443
No 248
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.32 E-value=1.8e-09 Score=111.35 Aligned_cols=242 Identities=16% Similarity=0.119 Sum_probs=151.3
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+..+.|||||++||.... + ..|++||+.+++..... ........++|+||++.|+....+
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~-d----g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d------------ 86 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSA-D----KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD------------ 86 (312)
T ss_dssp SCEEEEEECTTSSEEEEEET-T----SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT------------
T ss_pred CcEEEEEECCCCCEEEEeeC-C----CeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC------------
Confidence 34678999999999886642 2 37999999988754321 122235789999999988877533
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
..|.+|++.++.. +..+.. +...+..+.|+|++++|+....++ .+.++|+.++.
T Consensus 87 -------~~i~vwd~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~---------- 140 (312)
T 4ery_A 87 -------KTLKIWDVSSGKC--LKTLKG--HSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTGK---------- 140 (312)
T ss_dssp -------SEEEEEETTTCCE--EEEEEC--CSSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCC----------
T ss_pred -------CEEEEEECCCCcE--EEEEcC--CCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCE----------
Confidence 3688999876542 222322 234566889999999987665433 38888987642
Q ss_pred CCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEec
Q 004766 291 GLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLS 369 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~ 369 (732)
....+....... ...|+|+|+.|+..+.. ..|..+|+.++.....+.... ...+..+.+++++..++....
T Consensus 141 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~ 212 (312)
T 4ery_A 141 ---CLKTLPAHSDPVSAVHFNRDGSLIVSSSYD----GLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATL 212 (312)
T ss_dssp ---EEEEECCCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCCEEEEECCSS-CCCEEEEEECTTSSEEEEEET
T ss_pred ---EEEEecCCCCcEEEEEEcCCCCEEEEEeCC----CcEEEEECCCCceeeEEeccC-CCceEEEEECCCCCEEEEEcC
Confidence 122222221111 22488988877654432 368889998776334443332 356777888887667777777
Q ss_pred CCeeEEEEEeCCCCceeeeccccccee--eEeecc-cCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 370 DVKYVLQIRDLKNGSLLHQLPIEIGSV--NAISAR-REDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~~~~~l~~~~g~v--~~~~~s-~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
++ .|.+||+.+++.+..+..+.... ....++ +++. ++++.+ .-..++.+|+.+++
T Consensus 213 d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~---~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 213 DN--TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGS---EDNLVYIWNLQTKE 270 (312)
T ss_dssp TT--EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSC-EEEECC---TTSCEEEEETTTCC
T ss_pred CC--eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCc-EEEEEC---CCCEEEEEECCCch
Confidence 74 78999998887655554332111 111222 3444 333322 34578899988774
No 249
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.32 E-value=5.7e-10 Score=131.41 Aligned_cols=242 Identities=11% Similarity=0.057 Sum_probs=159.8
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+..++|||||++||.... + ..|+|||+.+|+.+... ........++|+|||+.|+....+
T Consensus 15 ~v~~i~~sp~~~~la~~~~-~----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------------- 76 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLY-S----GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD------------- 76 (814)
T ss_dssp CEEEEEECSSSSEEEEEET-T----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-------------
T ss_pred ceEEEEECCCCCEEEEEeC-C----CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC-------------
Confidence 3678999999999998752 2 37999999998754322 122235789999999999987532
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
..|.+|++.++.. +..+. .+...+..++|+|||++|+....+ ..+.++++.++.
T Consensus 77 ------g~i~vw~~~~~~~--~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~----------- 130 (814)
T 3mkq_A 77 ------FRIRVFNYNTGEK--VVDFE--AHPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNW----------- 130 (814)
T ss_dssp ------SEEEEEETTTCCE--EEEEE--CCSSCEEEEEECSSSSEEEEEETT-----SEEEEEEGGGTS-----------
T ss_pred ------CeEEEEECCCCcE--EEEEe--cCCCCEEEEEEeCCCCEEEEEcCC-----CEEEEEECCCCc-----------
Confidence 3689999877642 22232 233456789999999998865532 347778877631
Q ss_pred CCCcEEeeecccce-EEEEEe-cCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec--CCEEEEEE
Q 004766 292 LLPFVKLIDGFDAQ-YEVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN--LNQMIVSY 367 (732)
Q Consensus 292 ~~~~~~l~~~~~~~-~~~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~--~~~l~~~~ 367 (732)
.....+....... ...|+| +++.|+..+. ...|..+|+.++.....+..+. ...+..+.+++ ++.+++..
T Consensus 131 -~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~----dg~v~vwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~ 204 (814)
T 3mkq_A 131 -ALEQTFEGHEHFVMCVAFNPKDPSTFASGCL----DRTVKVWSLGQSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITA 204 (814)
T ss_dssp -EEEEEEECCSSCEEEEEEETTEEEEEEEEET----TSEEEEEETTCSSCSEEEECCC-TTCCCEEEECCSTTCCEEEEE
T ss_pred -eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC----CCeEEEEECCCCcceeEEecCC-CCCEEEEEEEECCCCCEEEEE
Confidence 1112222211111 235888 6666665443 2468889987765333343332 24567778876 56677777
Q ss_pred ecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 368 LSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 368 ~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
..++ .|.+||+.+++.+..+..+.+.+..+.++++++.++... . -..++.+|+.+++
T Consensus 205 ~~dg--~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 205 SDDL--TIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGS-E---DGTLKIWNSSTYK 261 (814)
T ss_dssp CTTS--EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEE-T---TSCEEEEETTTCS
T ss_pred eCCC--EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe-C---CCeEEEEECCCCc
Confidence 7774 789999988877666665566788888999998655432 2 2568899988774
No 250
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.31 E-value=3.8e-10 Score=117.20 Aligned_cols=241 Identities=16% Similarity=0.048 Sum_probs=152.9
Q ss_pred EEEEeEEECCC----CcEEEEEEeccCCceEEEEEEECCCCcee-cccc--cceeeeeEEEEeCCcEEEEEEecCCCCCC
Q 004766 132 AALIKVSVSED----AKYLAYALSYSGSDWATIKLMRIEDQIVE-ADAL--SWFKFSSIAWTHDSKGFFYSRYPAPKEGK 204 (732)
Q Consensus 132 ~~~~~~~~SPD----G~~la~~~~~~G~e~~~i~v~dl~~g~~~-~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~ 204 (732)
-.+..++|||+ +++|+-. + ...+|+|||+.+++.. .... .......++|+|+++.++....+
T Consensus 33 ~~V~~v~~~~~~~~~~~~l~tg-s----~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D------ 101 (321)
T 3ow8_A 33 DAIWSVAWGTNKKENSETVVTG-S----LDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD------ 101 (321)
T ss_dssp SCEEEEEEC-------CEEEEE-E----TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT------
T ss_pred CcEEEEEEecCCCCCCCEEEEE-c----CCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC------
Confidence 34678899986 4556533 2 2247899998877532 1111 11234788999999877766433
Q ss_pred CCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 205 DMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
..|.+|++.++.. +..+... ......++|+|||++|+....+ ..+.++++.++.
T Consensus 102 -------------~~i~lWd~~~~~~--~~~~~~~--~~~~~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~---- 155 (321)
T 3ow8_A 102 -------------AHIRLWDLENGKQ--IKSIDAG--PVDAWTLAFSPDSQYLATGTHV-----GKVNIFGVESGK---- 155 (321)
T ss_dssp -------------SEEEEEETTTTEE--EEEEECC--TTCCCCEEECTTSSEEEEECTT-----SEEEEEETTTCS----
T ss_pred -------------CcEEEEECCCCCE--EEEEeCC--CccEEEEEECCCCCEEEEEcCC-----CcEEEEEcCCCc----
Confidence 3689999876532 1222222 2233468999999998765432 347888887642
Q ss_pred cccccCCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEE
Q 004766 285 GFKKRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQM 363 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l 363 (732)
....+...... ....|+|+|+.|+..+.. ..|..+|+.+++....+..+. ..+..+.+++++.+
T Consensus 156 ---------~~~~~~~~~~~v~~~~~spdg~~lasg~~d----g~i~iwd~~~~~~~~~~~~h~--~~v~~l~~spd~~~ 220 (321)
T 3ow8_A 156 ---------KEYSLDTRGKFILSIAYSPDGKYLASGAID----GIINIFDIATGKLLHTLEGHA--MPIRSLTFSPDSQL 220 (321)
T ss_dssp ---------EEEEEECSSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTTEEEEEECCCS--SCCCEEEECTTSCE
T ss_pred ---------eeEEecCCCceEEEEEECCCCCEEEEEcCC----CeEEEEECCCCcEEEEEcccC--CceeEEEEcCCCCE
Confidence 11222221111 123589999887765443 358888998876334443333 56788999987778
Q ss_pred EEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 364 IVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 364 ~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+++...++ .|++||+.+++....+..+...+..+.++|++..++ +.+. -..+..+|+.+++
T Consensus 221 l~s~s~dg--~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~-s~s~---D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 221 LVTASDDG--YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFV-SSSS---DKSVKVWDVGTRT 281 (321)
T ss_dssp EEEECTTS--CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEET---TSCEEEEETTTTE
T ss_pred EEEEcCCC--eEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEE-EEeC---CCcEEEEeCCCCE
Confidence 88887774 688999987776666665566788889999988654 3333 2468899988774
No 251
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.31 E-value=1.5e-12 Score=132.55 Aligned_cols=187 Identities=12% Similarity=-0.027 Sum_probs=107.7
Q ss_pred cEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCCC
Q 004766 482 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSR 561 (732)
Q Consensus 482 P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 561 (732)
|.||++||..+... .|.. +...|. .||.|+++|+||.|.... .....+++++.+.+..+++.- ...+
T Consensus 52 ~~lvllHG~~~~~~--~~~~-l~~~L~-~~~~v~~~D~~G~G~S~~--------~~~~~~~~~~a~~~~~~l~~~-~~~~ 118 (280)
T 3qmv_A 52 LRLVCFPYAGGTVS--AFRG-WQERLG-DEVAVVPVQLPGRGLRLR--------ERPYDTMEPLAEAVADALEEH-RLTH 118 (280)
T ss_dssp EEEEEECCTTCCGG--GGTT-HHHHHC-TTEEEEECCCTTSGGGTT--------SCCCCSHHHHHHHHHHHHHHT-TCSS
T ss_pred ceEEEECCCCCChH--HHHH-HHHhcC-CCceEEEEeCCCCCCCCC--------CCCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 88999999876643 3443 456677 599999999999774311 122334566655555444431 1346
Q ss_pred cEEEEecChhHHHHHHHHhhCCCeee----EEEEcCCcc-cccccccC-CCC-Cc---cccccC-CCC----C-------
Q 004766 562 KLCIEGGSNGGLLVGACINQRPDLFG----CALAHVGVM-DMLRYHKF-TIG-HA---WVSDFG-CSE----E------- 619 (732)
Q Consensus 562 ~i~i~G~S~GG~l~~~~~~~~p~~f~----a~v~~~p~~-d~~~~~~~-~~~-~~---~~~~~g-~p~----~------- 619 (732)
++.++|+|+||.++..++.++|++.. .+++..+.. ........ ... .. +...++ .+. +
T Consensus 119 ~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (280)
T 3qmv_A 119 DYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRR 198 (280)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCTT
T ss_pred CEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHH
Confidence 89999999999999999998887665 444432211 11100000 000 00 000111 110 0
Q ss_pred ----HHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEE
Q 004766 620 ----EEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGR 695 (732)
Q Consensus 620 ----~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 695 (732)
...+..+..+.+. ... .+..|+|+++|.+|..+++....++.+.+ ...+.++
T Consensus 199 ~~~~~~~~~~~~~~~~~-~~~----------~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-------------~~~~~~~ 254 (280)
T 3qmv_A 199 LPVLRADLRACERYDWH-PRP----------PLDCPTTAFSAAADPIATPEMVEAWRPYT-------------TGSFLRR 254 (280)
T ss_dssp HHHHHHHHHHHHTCCCC-CCC----------CBCSCEEEEEEEECSSSCHHHHHTTGGGB-------------SSCEEEE
T ss_pred HHHHHHHHHHHHhcccc-CCC----------ceecCeEEEEecCCCCcChHHHHHHHHhc-------------CCceEEE
Confidence 0111222223221 112 37889999999999999987766554432 3346777
Q ss_pred EeCCCCCCCCC
Q 004766 696 IERKAGHGVGL 706 (732)
Q Consensus 696 ~~~~~gH~~~~ 706 (732)
++++ ||....
T Consensus 255 ~~~g-gH~~~~ 264 (280)
T 3qmv_A 255 HLPG-NHFFLN 264 (280)
T ss_dssp EEEE-ETTGGG
T ss_pred EecC-CCeEEc
Confidence 7765 998754
No 252
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.31 E-value=9.9e-10 Score=112.07 Aligned_cols=225 Identities=11% Similarity=0.079 Sum_probs=148.3
Q ss_pred EEeCCEEEEEEEcCCC---------CeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEE-eccCCc
Q 004766 87 FKRGNKYFYFHNTGLQ---------PQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYAL-SYSGSD 156 (732)
Q Consensus 87 ~~~g~~~~~~~~~~~~---------~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~-~~~G~e 156 (732)
...|+++||.....+. .+..||+.+..+++.++|.+.. ...|||+|++|+|+. +..+.
T Consensus 61 ~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~-----------~~~~s~~g~~Iy~~~~~~~~~- 128 (302)
T 3s25_A 61 NADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP-----------CIYASLIGNYIYYLHYDTQTA- 128 (302)
T ss_dssp EECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC-----------EEEEEEETTEEEEEEESSSSC-
T ss_pred EEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC-----------ccEEEEeCCEEEEEeecCCCC-
Confidence 4578999999765421 2456898887655555655422 236899999999986 23333
Q ss_pred eEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEE
Q 004766 157 WATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCW 236 (732)
Q Consensus 157 ~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~ 236 (732)
..|+.+++++......+.... .+|+|+|+.|+|+.. ...+|++.++.++.. ..|+
T Consensus 129 -~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~------------------g~~~Iy~~~l~g~~~--~~l~ 183 (302)
T 3s25_A 129 -TSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNP------------------KNGQLYRYDTASQSE--ALFY 183 (302)
T ss_dssp -EEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECT------------------TTCCEEEEETTTTEE--EEEE
T ss_pred -ceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeC------------------CCceEEEEECCCCCE--EEEe
Confidence 689999998765333222221 456889999999842 223699999876543 3455
Q ss_pred ecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeE
Q 004766 237 KDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVF 316 (732)
Q Consensus 237 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l 316 (732)
+. ... .+ ++|+|++|+++..... ..|+.+++++.. .+.|+... ...++|+|++|
T Consensus 184 ~~---~~~--~~-~~P~g~~iy~t~~~~~---~~I~~~~ldG~~--------------~~~Lt~~~---~~~~~~~g~~I 237 (302)
T 3s25_A 184 DC---NCY--KP-VVLDDTNVYYMDVNRD---NAIVHVNINNPN--------------PVVLTEAN---IEHYNVYGSLI 237 (302)
T ss_dssp CS---CEE--EE-EEEETTEEEEEEGGGT---TEEEEECSSSCC--------------CEECSCSC---EEEEEEETTEE
T ss_pred CC---Ccc--ce-eeecCCEEEEEEcCCC---cEEEEEECCCCC--------------eEEEeCCC---cceEEECCCEE
Confidence 32 222 23 5699999998765432 579999998743 34454322 24588999999
Q ss_pred EEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCce
Q 004766 317 TFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL 385 (732)
Q Consensus 317 ~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~ 385 (732)
|+.+... ...|+++++++.. .+.|... .+..+.++. ++|+++....+ .|+++.++ |..
T Consensus 238 y~~~~~~--~~~i~~~~~DG~~-r~~l~~~----~~~~i~i~~-d~Iy~td~~~~--~i~~~~~d-Gs~ 295 (302)
T 3s25_A 238 FYQRGGD--NPALCVVKNDGTG-FKELAKG----EFCNINVTS-QYVYFTDFVSN--KEYCTSTQ-NPD 295 (302)
T ss_dssp EEEECSS--SCEEEEEETTSCC-CEEEEES----CEEEEEECS-SEEEEEETTTC--CEEEEESS-SCC
T ss_pred EEEECCC--CcEEEEEECCCCc-cEEeeCC----ccceEEEeC-CEEEEEECCCC--eEEEEECC-CCC
Confidence 9876643 3689999998876 3455432 244566666 89998876554 48888876 543
No 253
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.31 E-value=2.1e-11 Score=122.83 Aligned_cols=103 Identities=16% Similarity=0.099 Sum_probs=72.0
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
.|.||++||..+... .|.. ....|.++||.|+++|+||.|..... ...+++++.+.+..+++.-..+.
T Consensus 16 ~~~vvllHG~~~~~~--~w~~-~~~~L~~~~~~vi~~Dl~GhG~S~~~---------~~~~~~~~a~~l~~~l~~l~~~~ 83 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGA--DWQP-VLSHLARTQCAALTLDLPGHGTNPER---------HCDNFAEAVEMIEQTVQAHVTSE 83 (264)
T ss_dssp BCEEEEECCTTCCGG--GGHH-HHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHTTCCTT
T ss_pred CCcEEEEcCCCCCHH--HHHH-HHHHhcccCceEEEecCCCCCCCCCC---------CccCHHHHHHHHHHHHHHhCcCC
Confidence 489999999877643 4443 34556557999999999998865421 11345666666666665422222
Q ss_pred CcEEEEecChhHHHHHH---HHhhCCCeeeEEEEcCCc
Q 004766 561 RKLCIEGGSNGGLLVGA---CINQRPDLFGCALAHVGV 595 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~---~~~~~p~~f~a~v~~~p~ 595 (732)
.++.++||||||.+++. ++.++|++++++|+..|.
T Consensus 84 ~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~ 121 (264)
T 1r3d_A 84 VPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGH 121 (264)
T ss_dssp SEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCC
T ss_pred CceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCC
Confidence 23999999999999999 778899999999887653
No 254
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.30 E-value=2e-09 Score=114.78 Aligned_cols=223 Identities=9% Similarity=0.029 Sum_probs=146.3
Q ss_pred EEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEe
Q 004766 158 ATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWK 237 (732)
Q Consensus 158 ~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~ 237 (732)
..|++||+++++.+...........++|+|||+.|+++.. ....|++|++.+++.. ..+.
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------------------~d~~i~v~d~~~~~~~--~~~~ 71 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANA------------------HSNDVSIIDTATNNVI--ATVP 71 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEG------------------GGTEEEEEETTTTEEE--EEEE
T ss_pred CEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECC------------------CCCeEEEEECCCCeEE--EEEE
Confidence 4799999999986543222223478999999999887742 3347999998765321 2222
Q ss_pred cCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEE
Q 004766 238 DPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFT 317 (732)
Q Consensus 238 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~ 317 (732)
... ....++|||||++|++.... ...|+++|+.++. ....+..+.......|+|+|+.++
T Consensus 72 ~~~---~v~~~~~spdg~~l~~~~~~----~~~v~v~d~~~~~-------------~~~~~~~~~~~~~~~~s~dg~~l~ 131 (391)
T 1l0q_A 72 AGS---SPQGVAVSPDGKQVYVTNMA----SSTLSVIDTTSNT-------------VAGTVKTGKSPLGLALSPDGKKLY 131 (391)
T ss_dssp CSS---SEEEEEECTTSSEEEEEETT----TTEEEEEETTTTE-------------EEEEEECSSSEEEEEECTTSSEEE
T ss_pred CCC---CccceEECCCCCEEEEEECC----CCEEEEEECCCCe-------------EEEEEeCCCCcceEEECCCCCEEE
Confidence 222 45689999999999877533 2458999988742 122222222222235899999887
Q ss_pred EEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEEEEEecCCeeEEEEEeCCCCceeeeccccccee
Q 004766 318 FLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSV 396 (732)
Q Consensus 318 ~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v 396 (732)
+.... ...|+.+|+.+++ ....+... .....+.+++++ .+++....+ ..|++||+.+++....+.. ...+
T Consensus 132 ~~~~~---~~~v~~~d~~~~~-~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~--~~v~~~d~~~~~~~~~~~~-~~~~ 202 (391)
T 1l0q_A 132 VTNNG---DKTVSVINTVTKA-VINTVSVG--RSPKGIAVTPDGTKVYVANFDS--MSISVIDTVTNSVIDTVKV-EAAP 202 (391)
T ss_dssp EEETT---TTEEEEEETTTTE-EEEEEECC--SSEEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEEC-SSEE
T ss_pred EEeCC---CCEEEEEECCCCc-EEEEEecC--CCcceEEECCCCCEEEEEeCCC--CEEEEEECCCCeEEEEEec-CCCc
Confidence 76543 3479999998876 23333332 345778888754 565665555 4799999987776555543 3456
Q ss_pred eEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 397 NAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 397 ~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
..+.++++++.+++.... .....++.+|+.+++
T Consensus 203 ~~~~~~~~g~~l~~~~~~-~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 203 SGIAVNPEGTKAYVTNVD-KYFNTVSMIDTGTNK 235 (391)
T ss_dssp EEEEECTTSSEEEEEEEC-SSCCEEEEEETTTTE
T ss_pred cceEECCCCCEEEEEecC-cCCCcEEEEECCCCe
Confidence 677889999887766531 234689999998774
No 255
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.29 E-value=1.5e-09 Score=123.47 Aligned_cols=246 Identities=11% Similarity=0.064 Sum_probs=150.5
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee-c--ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE-A--DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~-~--~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
..+..++|||||++||-.. ...+|+|||+.+++.. . ..........++|+|||+.|+.+..+.
T Consensus 60 ~~v~~~~~spdg~~lasg~-----~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~--------- 125 (611)
T 1nr0_A 60 HQTTVAKTSPSGYYCASGD-----VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGR--------- 125 (611)
T ss_dssp SCEEEEEECTTSSEEEEEE-----TTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCS---------
T ss_pred CceEEEEECCCCcEEEEEe-----CCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCC---------
Confidence 3477899999999998553 2248999999766521 1 111112357899999999998775332
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
.....|+.|+.++.... + ..+...+..++|+||+++++++.+... .+.++|..++.
T Consensus 126 ------~~~~~v~~wd~~~~~~~----l--~gh~~~v~~v~f~p~~~~~l~s~s~D~----~v~lwd~~~~~-------- 181 (611)
T 1nr0_A 126 ------ERFGHVFLFDTGTSNGN----L--TGQARAMNSVDFKPSRPFRIISGSDDN----TVAIFEGPPFK-------- 181 (611)
T ss_dssp ------SCSEEEEETTTCCBCBC----C--CCCSSCEEEEEECSSSSCEEEEEETTS----CEEEEETTTBE--------
T ss_pred ------CceeEEEEeeCCCCcce----e--cCCCCCceEEEECCCCCeEEEEEeCCC----eEEEEECCCCe--------
Confidence 12236788876543211 1 123345678999999986444443322 36677765421
Q ss_pred cCCCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccC-----CCCCceeEEEEecCCE
Q 004766 289 RDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPE-----AERDVLESATAVNLNQ 362 (732)
Q Consensus 289 ~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~-----~~~~~l~~~~~~~~~~ 362 (732)
....+........ ..|+|||+.|+..+. +..|..+|+.++.....+... .....+..+.|++++.
T Consensus 182 -----~~~~l~~H~~~V~~v~fspdg~~las~s~----D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~ 252 (611)
T 1nr0_A 182 -----FKSTFGEHTKFVHSVRYNPDGSLFASTGG----DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT 252 (611)
T ss_dssp -----EEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS
T ss_pred -----EeeeeccccCceEEEEECCCCCEEEEEEC----CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC
Confidence 1122222222222 248999987765443 235888888777633333210 1235688899998777
Q ss_pred EEEEEecCCeeEEEEEeCCCCceeeeccc-------------------------------------------ccceeeEe
Q 004766 363 MIVSYLSDVKYVLQIRDLKNGSLLHQLPI-------------------------------------------EIGSVNAI 399 (732)
Q Consensus 363 l~~~~~~~g~~~l~~~d~~~g~~~~~l~~-------------------------------------------~~g~v~~~ 399 (732)
.+++...|+ .|.+||+.+++.+..+.. +...+..+
T Consensus 253 ~l~s~s~D~--~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l 330 (611)
T 1nr0_A 253 KIASASADK--TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITAL 330 (611)
T ss_dssp EEEEEETTS--EEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred EEEEEeCCC--eEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEE
Confidence 788888774 788899887765433321 12346667
Q ss_pred ecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 400 SARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 400 ~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.++||++.++ +.+. -..+..+|+.+++
T Consensus 331 ~~spdg~~l~-s~s~---D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 331 SSSADGKTLF-SADA---EGHINSWDISTGI 357 (611)
T ss_dssp EECTTSSEEE-EEET---TSCEEEEETTTCC
T ss_pred EEeCCCCEEE-EEeC---CCcEEEEECCCCc
Confidence 7888888654 3332 2478889988774
No 256
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.28 E-value=9.7e-10 Score=118.99 Aligned_cols=244 Identities=12% Similarity=0.033 Sum_probs=153.8
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc------ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA------LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~------~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
.++||| ++.++++...+ ..|++||+++|+.+... ........++|+|||+.++...
T Consensus 127 ~~~~s~-~~~~~~~~~~~----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~------------- 188 (433)
T 3bws_A 127 SVRFID-NTRLAIPLLED----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM------------- 188 (433)
T ss_dssp CCEESS-SSEEEEEBTTS----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG-------------
T ss_pred EEEEeC-CCeEEEEeCCC----CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC-------------
Confidence 678999 55565554332 36999999999865311 1111246789999887554332
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
....|++|++.++... ..+. ........++|+|||+++++.... ...|+++|+.++.
T Consensus 189 ------~d~~v~~~d~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~l~~~~~~----~~~i~~~d~~~~~--------- 245 (433)
T 3bws_A 189 ------QANAVHVFDLKTLAYK--ATVD--LTGKWSKILLYDPIRDLVYCSNWI----SEDISVIDRKTKL--------- 245 (433)
T ss_dssp ------GGTEEEEEETTTCCEE--EEEE--CSSSSEEEEEEETTTTEEEEEETT----TTEEEEEETTTTE---------
T ss_pred ------CCCEEEEEECCCceEE--EEEc--CCCCCeeEEEEcCCCCEEEEEecC----CCcEEEEECCCCc---------
Confidence 2347899998765322 2222 222345688999999998766532 2358999987642
Q ss_pred CCCCCcEEeeecccceEEEEEecCCeEEEEeCCCC----CCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEE
Q 004766 290 DGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDA----PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMI 364 (732)
Q Consensus 290 ~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~----~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~ 364 (732)
....+..........|+|+|+.+++...... .+..|+.+|+.+++ ....+.+. ..+..+.+++++ .++
T Consensus 246 ----~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~-~~~~~~~~--~~~~~~~~~~~g~~l~ 318 (433)
T 3bws_A 246 ----EIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK-LIDTIGPP--GNKRHIVSGNTENKIY 318 (433)
T ss_dssp ----EEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE-EEEEEEEE--ECEEEEEECSSTTEEE
T ss_pred ----EEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc-EEeeccCC--CCcceEEECCCCCEEE
Confidence 1111111111222358899998887664321 25689999998775 23333332 245678888754 677
Q ss_pred EEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCC-----------ceEEEEECCCCC
Q 004766 365 VSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIP-----------GIVYQCNLKTET 430 (732)
Q Consensus 365 ~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p-----------~~~y~~d~~~~~ 430 (732)
+....+ ..|++||+.+++....+.. ...+..+.++++++.+++.......+ ..++.+|+.+++
T Consensus 319 ~~~~~~--~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 319 VSDMCC--SKIEVYDLKEKKVQKSIPV-FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp EEETTT--TEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred EEecCC--CEEEEEECCCCcEEEEecC-CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 776666 4799999987876555543 34466788899998877665543322 489999998874
No 257
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.28 E-value=1e-09 Score=127.51 Aligned_cols=250 Identities=12% Similarity=0.019 Sum_probs=156.6
Q ss_pred CCCCcEEEEEEeccCCceEEEEEEEC---CCC--c--eecccc------cceeeeeEEEE-eCCcEEEEEEecCCCCCCC
Q 004766 140 SEDAKYLAYALSYSGSDWATIKLMRI---EDQ--I--VEADAL------SWFKFSSIAWT-HDSKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 140 SPDG~~la~~~~~~G~e~~~i~v~dl---~~g--~--~~~~~~------~~~~~~~~~Ws-pDg~~l~y~~~~~~~~~~~ 205 (732)
.++|.++.|+...+|.+...++..+. .++ . .+.+.. +....+.++|| |||+.|+|+....
T Consensus 123 ~~~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~------ 196 (751)
T 2xe4_A 123 YVYGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMS------ 196 (751)
T ss_dssp EEETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESS------
T ss_pred eEECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCC------
Confidence 37899999998888776667888886 443 2 222211 11134789999 9999999997643
Q ss_pred CCCCCcccCCcccEEEEEECCCC-CCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTK-QSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~-~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
.....+||++++.++ ......+ . ....++.|||||+.|++...+......+||++++.++...
T Consensus 197 --------G~~~~~l~v~dl~~g~~~l~~~~-~-----~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~-- 260 (751)
T 2xe4_A 197 --------GNEVYTIEFKRISDPSQTIADKV-S-----GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSE-- 260 (751)
T ss_dssp --------SSSCEEEEEEETTCTTCCCCCCE-E-----EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGG--
T ss_pred --------CCceEEEEEEECCCCCEeCCccc-c-----CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchh--
Confidence 123357999999887 4211001 1 1123689999999999987654333468999999774211
Q ss_pred cccccCCCCCcEEeeecccc---eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-Cc--eEeccCCCCCceeEEEEe
Q 004766 285 GFKKRDGLLPFVKLIDGFDA---QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-DW--FEVIPEAERDVLESATAV 358 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~---~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~--~~l~~~~~~~~l~~~~~~ 358 (732)
-..+....+. ....|||||+.|++.+... ....|+.+|++++. .+ +.+++.. ......+.+.
T Consensus 261 ----------~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~l~~~d~~~~~~~~~~~~l~~~~-~~~~~s~~~~ 328 (751)
T 2xe4_A 261 ----------DVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP-ETAEVHLLDLRKGNAHNTLEIVRPRE-KGVRYDVQMH 328 (751)
T ss_dssp ----------CEEEEECCCTTCEEEEEECTTSSEEEEEEECS-SCEEEEEEESSSCTTCCCEEESSCCC-TTCCEEEEEE
T ss_pred ----------cEEEEecCCCceEEEEEECCCCCEEEEEecCC-CCceEEEEECCCCCCCceeEEeecCC-CCceEEEeee
Confidence 1122221111 1235999999999988654 36789999998763 35 6666544 2333334444
Q ss_pred cCCEEEEEEecC--CeeEEEEEeCCCCceeee-cccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEEC
Q 004766 359 NLNQMIVSYLSD--VKYVLQIRDLKNGSLLHQ-LPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNL 426 (732)
Q Consensus 359 ~~~~l~~~~~~~--g~~~l~~~d~~~g~~~~~-l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~ 426 (732)
.++.+++....+ +..+|++++++++...+. +..+ ...+..++ ..++.+++++.. .....++.+++
T Consensus 329 ~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~--~~~~~lv~~~~~-~g~~~l~~~dl 398 (751)
T 2xe4_A 329 GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIA--VRSNYLVVAGRR-AGLTRIWTMMA 398 (751)
T ss_dssp TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEE--ECSSEEEEEEEE-TTEEEEEEEEC
T ss_pred eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEE--EECCEEEEEEEe-CCEEEEEEEec
Confidence 457888888775 567999999875322234 3222 22334444 346677777654 33567889986
No 258
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.28 E-value=1.7e-10 Score=122.90 Aligned_cols=122 Identities=15% Similarity=0.081 Sum_probs=90.2
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhc---------CcEEEEEcccCCCCCchh
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHL---------GAVFCIANIRGGGEYGEE 528 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~---------G~~v~~~~~rG~g~~g~~ 528 (732)
..|| .+|++..+.+++ +..|.||++||.+++.. .|.. +...|.+. ||.|+++|.||.|....
T Consensus 74 ~i~g-~~i~~~~~~~~~----~~~~plll~HG~~~s~~--~~~~-~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~- 144 (388)
T 4i19_A 74 EIDG-ATIHFLHVRSPE----PDATPMVITHGWPGTPV--EFLD-IIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGP- 144 (388)
T ss_dssp EETT-EEEEEEEECCSS----TTCEEEEEECCTTCCGG--GGHH-HHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCC-
T ss_pred EECC-eEEEEEEccCCC----CCCCeEEEECCCCCCHH--HHHH-HHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCC-
Confidence 4489 999987776543 45688999999988643 3443 34566634 99999999999774321
Q ss_pred HHhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 529 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 529 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
......+++++...+..|++. ...+++.++|+|+||+++..++.++|++++++|+..|+.
T Consensus 145 ------~~~~~~~~~~~a~~~~~l~~~--lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 145 ------LKSAGWELGRIAMAWSKLMAS--LGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp ------CSSCCCCHHHHHHHHHHHHHH--TTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred ------CCCCCCCHHHHHHHHHHHHHH--cCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 111134677777777777655 233589999999999999999999999999999987643
No 259
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.28 E-value=8.7e-10 Score=118.73 Aligned_cols=225 Identities=14% Similarity=0.103 Sum_probs=148.2
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...+..+.|||||++|+-.. ...+|++||+.+++.+... ........++|+|||+.|+....+
T Consensus 150 ~~~V~~v~~~~~~~~l~sgs-----~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D----------- 213 (410)
T 1vyh_C 150 TDSVQDISFDHSGKLLASCS-----ADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD----------- 213 (410)
T ss_dssp SSCEEEEEECTTSSEEEEEE-----TTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETT-----------
T ss_pred CCcEEEEEEcCCCCEEEEEe-----CCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC-----------
Confidence 34578899999999887553 2247999999988755322 112235789999999988876533
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
..|.+|++.++.. +..+.. +...+..+.++|||++|+..+.++. +.++|+.++..
T Consensus 214 --------~~i~~wd~~~~~~--~~~~~~--h~~~v~~~~~~~~g~~l~s~s~D~~-----v~vwd~~~~~~-------- 268 (410)
T 1vyh_C 214 --------KTIKMWEVQTGYC--VKTFTG--HREWVRMVRPNQDGTLIASCSNDQT-----VRVWVVATKEC-------- 268 (410)
T ss_dssp --------SEEEEEETTTCCE--EEEEEC--CSSCEEEEEECTTSSEEEEEETTSC-----EEEEETTTCCE--------
T ss_pred --------CeEEEEECCCCcE--EEEEeC--CCccEEEEEECCCCCEEEEEcCCCe-----EEEEECCCCce--------
Confidence 3689999987642 222332 3345678899999999877664433 77788876421
Q ss_pred CCCCCcEEeeecccce-EEEEEec--------------------CCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCC
Q 004766 290 DGLLPFVKLIDGFDAQ-YEVIAND--------------------DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE 348 (732)
Q Consensus 290 ~~~~~~~~l~~~~~~~-~~~~s~d--------------------g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~ 348 (732)
...+....... ...|+|+ |..|+. ... ...|..+|+.++.....+..+.
T Consensus 269 -----~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s-gs~---D~~i~iwd~~~~~~~~~~~~h~- 338 (410)
T 1vyh_C 269 -----KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS-GSR---DKTIKMWDVSTGMCLMTLVGHD- 338 (410)
T ss_dssp -----EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEE-EET---TSEEEEEETTTTEEEEEEECCS-
T ss_pred -----eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEE-EeC---CCeEEEEECCCCceEEEEECCC-
Confidence 11221111111 1135664 333433 322 3468889998876455555554
Q ss_pred CCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEE
Q 004766 349 RDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVF 409 (732)
Q Consensus 349 ~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~ 409 (732)
..+..+.+++++.++++...++ .|++||+.+++.+..+..+...|..+.++++++.++
T Consensus 339 -~~v~~v~~~~~g~~l~s~s~D~--~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~ 396 (410)
T 1vyh_C 339 -NWVRGVLFHSGGKFILSCADDK--TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396 (410)
T ss_dssp -SCEEEEEECSSSSCEEEEETTT--EEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEE
T ss_pred -CcEEEEEEcCCCCEEEEEeCCC--eEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEE
Confidence 5678889988777777777774 789999987877667766667788889999988554
No 260
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.27 E-value=2.5e-09 Score=116.62 Aligned_cols=201 Identities=12% Similarity=0.068 Sum_probs=123.2
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECC--CCCCCCeEEEecCCCCeeEEEeEEecCCcEE
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLG--TKQSEDILCWKDPEHPKYIFSGHVTEDGQYL 257 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lg--t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l 257 (732)
...++|+|||+.|+++.. ....|.+|++. ++. .+..+.....+.....++|+|||++|
T Consensus 105 v~~~~~s~d~~~l~~~~~------------------~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~v~~~~~sp~~~~l 164 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACAD------------------SDKSLLVFDVDKTSKN--VLKLRKRFCFSKRPNAISIAEDDTTV 164 (450)
T ss_dssp EEEEEECTTSSEEEEEEG------------------GGTEEEEEEECSSSSS--CEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred eEEEEEcCCCCEEEEEEC------------------CCCeEEEEECcCCCCc--eeeeeecccCCCCceEEEEcCCCCEE
Confidence 467899999999866642 23468888887 443 22333221223346689999999999
Q ss_pred EEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceE-EEEEec---CCeEEEEeCCCCCCceEEEEe
Q 004766 258 VMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIAND---DTVFTFLTNKDAPKYKIIRVD 333 (732)
Q Consensus 258 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~d---g~~l~~~s~~~~~~~~l~~~d 333 (732)
+....+ ..++++++.++... ..+...+........ ..|+|+ ++.|+. +..+ ..|..+|
T Consensus 165 ~~~~~~-----g~v~~~~~~~~~~~---------~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s-~~~d---~~i~vwd 226 (450)
T 2vdu_B 165 IIADKF-----GDVYSIDINSIPEE---------KFTQEPILGHVSMLTDVHLIKDSDGHQFIIT-SDRD---EHIKISH 226 (450)
T ss_dssp EEEETT-----SEEEEEETTSCCCS---------SCCCCCSEECSSCEEEEEEEECTTSCEEEEE-EETT---SCEEEEE
T ss_pred EEEeCC-----CcEEEEecCCcccc---------cccceeeecccCceEEEEEcCCCCCCcEEEE-EcCC---CcEEEEE
Confidence 876532 34889998764311 001112222222122 258998 655554 3332 3578888
Q ss_pred CCCCCCceEec-cCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc--------------------
Q 004766 334 LKEPNDWFEVI-PEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-------------------- 392 (732)
Q Consensus 334 ~~~~~~~~~l~-~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-------------------- 392 (732)
+.++.....+. .+. ..+..+.++ ++.++++...++ .|.+||+.+|+.+..+...
T Consensus 227 ~~~~~~~~~~~~~h~--~~v~~~~~s-d~~~l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 227 YPQCFIVDKWLFGHK--HFVSSICCG-KDYLLLSAGGDD--KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp ESCTTCEEEECCCCS--SCEEEEEEC-STTEEEEEESSS--EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-------
T ss_pred CCCCceeeeeecCCC--CceEEEEEC-CCCEEEEEeCCC--eEEEEECCCCcEeeeecchhhhhhhhhhccccccccccc
Confidence 87776344433 333 567888888 677777777664 7999999988865555421
Q ss_pred -----cceeeEeecccCCcEEEEEEecCCCCceEEEEEC
Q 004766 393 -----IGSVNAISARREDSVVFISFTSFLIPGIVYQCNL 426 (732)
Q Consensus 393 -----~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~ 426 (732)
...+..+.++++++.+++.... -..++.|++
T Consensus 302 ~~~~~~~~v~~i~~~~~~~~l~~~~~~---d~~i~iw~~ 337 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLPFVAFFVEA---TKCIIILEM 337 (450)
T ss_dssp ---CBCCCEEEEEECSSSSEEEEEETT---CSEEEEEEE
T ss_pred ccccceEEEEEEEEeCCCCEEEEEECC---CCeEEEEEe
Confidence 1346677788888876655422 356888887
No 261
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.27 E-value=1.7e-09 Score=113.87 Aligned_cols=242 Identities=9% Similarity=0.024 Sum_probs=151.6
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+..+.|||||++||-.. ...+|+|||+.+++.... .........++|+|||+.|+....
T Consensus 65 ~~V~~~~~s~d~~~l~s~s-----~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~------------- 126 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSS-----QDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGL------------- 126 (354)
T ss_dssp SCEEEEEECTTSSEEEEEE-----TTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEEST-------------
T ss_pred CeEEEEEECCCCCEEEEEe-----CCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeC-------------
Confidence 3467899999999887543 235899999988874321 111112468999999998887632
Q ss_pred cccCCcccEEEEEECCCCCC----CCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 211 ETDSNLYHEFYYHFLGTKQS----EDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~----~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
...+.+|++..... .....+.. +...+..+.|+|+++.|+..+.+ ..+.++|+.++.
T Consensus 127 ------d~~i~v~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~t~s~D-----~~v~lwd~~~~~------ 187 (354)
T 2pbi_B 127 ------DNKCSVYPLTFDKNENMAAKKKSVAM--HTNYLSACSFTNSDMQILTASGD-----GTCALWDVESGQ------ 187 (354)
T ss_dssp ------TSEEEEEECCCCTTCCSGGGCEEEEE--CSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCC------
T ss_pred ------CCCEEEEEEeccccccccccceeeec--cCCcEEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCCe------
Confidence 33567777654321 11112222 23356688999999998766543 347888988742
Q ss_pred cccCCCCCcEEeeecccceE--EEEEe--cCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCE
Q 004766 287 KKRDGLLPFVKLIDGFDAQY--EVIAN--DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ 362 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~~~~--~~~s~--dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 362 (732)
....+.. ....+ ..++| +|+.|+..+. ...|..+|+.++.....+..+. ..+..+.+++++.
T Consensus 188 -------~~~~~~~-h~~~v~~~~~~~~~~g~~l~sgs~----Dg~v~~wd~~~~~~~~~~~~h~--~~v~~v~~~p~~~ 253 (354)
T 2pbi_B 188 -------LLQSFHG-HGADVLCLDLAPSETGNTFVSGGC----DKKAMVWDMRSGQCVQAFETHE--SDVNSVRYYPSGD 253 (354)
T ss_dssp -------EEEEEEC-CSSCEEEEEECCCSSCCEEEEEET----TSCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSS
T ss_pred -------EEEEEcC-CCCCeEEEEEEeCCCCCEEEEEeC----CCeEEEEECCCCcEEEEecCCC--CCeEEEEEeCCCC
Confidence 1222322 22222 23555 4555554333 3468899998877444443443 5688899998777
Q ss_pred EEEEEecCCeeEEEEEeCCCCceeeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 363 MIVSYLSDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 363 l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
++++...++ .|++||+.+++.+..+... ...+..+.+++++..++.... -..+..||+.+++
T Consensus 254 ~l~s~s~D~--~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~----d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 254 AFASGSDDA--TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYN----DYTINVWDVLKGS 317 (354)
T ss_dssp EEEEEETTS--CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCS
T ss_pred EEEEEeCCC--eEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEEC----CCcEEEEECCCCc
Confidence 777887774 6888999866553333322 234567788899986654433 2578899987774
No 262
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=99.27 E-value=4.2e-12 Score=140.71 Aligned_cols=227 Identities=18% Similarity=0.204 Sum_probs=135.4
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCccCC-CCcChhH--HH-HHHhcCcEEEEEcccCCCCCchhHHhcc---cccC
Q 004766 465 IPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSR--TI-LMRHLGAVFCIANIRGGGEYGEEWHKGG---ALAK 537 (732)
Q Consensus 465 i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~-~~~~~~~--~~-~l~~~G~~v~~~~~rG~g~~g~~~~~~~---~~~~ 537 (732)
+.+.++.|+....+++.|+||++|||...... ..|.... .. +....|++|+.+|||.+. +| |.... ....
T Consensus 106 l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~-~g--f~~~~~~~~~~~ 182 (544)
T 1thg_A 106 LYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGP-FG--FLGGDAITAEGN 182 (544)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHH-HH--HCCSHHHHHHTC
T ss_pred eEEEEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCc-cc--CCCcccccccCC
Confidence 55667788765445679999999998543222 2343221 11 122258999999999764 21 11000 0123
Q ss_pred CccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhhC--------CCeeeEEEEcCCcccccccccCCC
Q 004766 538 KQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQR--------PDLFGCALAHVGVMDMLRYHKFTI 606 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~--------p~~f~a~v~~~p~~d~~~~~~~~~ 606 (732)
+...+.|+.+|++|+.++- -.||+||.|+|+|+||.+++.++... +.+|+++|+.+|............
T Consensus 183 ~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~~~~~~~~~~~ 262 (544)
T 1thg_A 183 TNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPLPYHDSSSVG 262 (544)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCCCCCSSSCCSS
T ss_pred CchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccccccCcCChHH
Confidence 3446899999999998762 36999999999999999998877752 468999999998542211111011
Q ss_pred CC-cc---ccccCCCCC---HHHHHHHHhcCcccCCCCCCC-CCCCCCCCCCe-EEEEeeCCCCCCCchHHHHHHHHHHH
Q 004766 607 GH-AW---VSDFGCSEE---EEEFYWLIKYSPLHNVRRPWE-QNPDKPFQYPS-TLLLTADHDDRVVPLHSLKLLATMQY 677 (732)
Q Consensus 607 ~~-~~---~~~~g~p~~---~~~~~~~~~~sp~~~~~~~~~-~~~~~~~~~~p-~Li~~g~~D~~v~~~~~~~~~~~l~~ 677 (732)
.. .+ ....|++.. .+..+.|++.++-..++.... ..... ...++ .+......|..+.+.++.++.++.+.
T Consensus 263 ~~~~~~~~~~~~gc~~~~~~~~~~~cLr~~~~~~l~~~~~~~~~~~~-~~~~~~~~~f~P~~Dg~~l~~~p~~~~~~g~~ 341 (544)
T 1thg_A 263 PDISYNRFAQYAGCDTSASANDTLECLRSKSSSVLHDAQNSYDLKDL-FGLLPQFLGFGPRPDGNIIPDAAYELFRSGRY 341 (544)
T ss_dssp SSCHHHHHHHHHTCCTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHS-TTTSCGGGTSCCCCCSSSSCSCHHHHHHTTCS
T ss_pred HHHHHHHHHHHhCCCCCCCcHHHHHHHhcCCHHHHHHhhhhcccccc-cccccccccceeeeCCcccCcCHHHHHhcCCC
Confidence 11 11 123566532 245666777665432211000 00000 00011 11233445777888888887766544
Q ss_pred hhcCCCCCCCCCCCEEEEEeCCCCCCCC
Q 004766 678 VLCTSLENSPQTNPIIGRIERKAGHGVG 705 (732)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 705 (732)
. ++|+.+-...++||.+.
T Consensus 342 ~----------~vp~l~G~~~~Eg~~f~ 359 (544)
T 1thg_A 342 A----------KVPYISGNQEDEGTAFA 359 (544)
T ss_dssp C----------CCCEEEEEETBTTTTTG
T ss_pred C----------CccEEEEeecCchhhhc
Confidence 4 78999999999999875
No 263
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.26 E-value=2.5e-10 Score=122.80 Aligned_cols=262 Identities=12% Similarity=0.045 Sum_probs=154.1
Q ss_pred EEeEEECCCCcEEEEEEeccC------CceEEEEEEECCCCce---ecccccceeeeeEEEEeCCcEEEEEEecCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSG------SDWATIKLMRIEDQIV---EADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGK 204 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G------~e~~~i~v~dl~~g~~---~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~ 204 (732)
+..++|||||+.++++.+..| +....|++||+.+++. +........+..++|+||++.|+....+
T Consensus 15 v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------ 88 (416)
T 2pm9_A 15 TATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN------ 88 (416)
T ss_dssp SCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS------
T ss_pred cceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC------
Confidence 346789999985555544444 4456899999998862 2222222235789999999988877543
Q ss_pred CCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecC-CcEEEEEEecCCcceEEEEEEeCCCCCCCc
Q 004766 205 DMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTED-GQYLVMCIEENCDPVNKVYYCDLSALPEGL 283 (732)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 283 (732)
..|.+|++.+.......+.....+...+..+.|+|| +++|+....+ ..|+++|+.++....
T Consensus 89 -------------g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~ 150 (416)
T 2pm9_A 89 -------------GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN-----GEIFIWDMNKCTESP 150 (416)
T ss_dssp -------------SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS-----SCEEBCBTTTTSSCT
T ss_pred -------------CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCC-----CeEEEEECCCCcccc
Confidence 258888887632222133332333344567899999 6766554332 348888987743100
Q ss_pred ccccccCCCCCcEEeeecc-cceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCC----CCceeEEEEe
Q 004766 284 EGFKKRDGLLPFVKLIDGF-DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE----RDVLESATAV 358 (732)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~----~~~l~~~~~~ 358 (732)
..+ .......+.... ......|+|++..+++.... ...|..+|+.++.....+..+.. ...+..+.++
T Consensus 151 ~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 151 SNY----TPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS---SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTC----CCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS---SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred ccc----cccccccccCCCCCeeEEEeCCCCCcEEEEEcC---CCCEEEEECCCCCcceEEeccccccccCCceEEEEEC
Confidence 000 000000011111 11223588985555555443 34688899987753333322210 3568889999
Q ss_pred cCC-EEEEEEecCC-eeEEEEEeCCCC-ceeeecc-cccceeeEeeccc-CCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 359 NLN-QMIVSYLSDV-KYVLQIRDLKNG-SLLHQLP-IEIGSVNAISARR-EDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 359 ~~~-~l~~~~~~~g-~~~l~~~d~~~g-~~~~~l~-~~~g~v~~~~~s~-d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+++ .+++....++ ...|++||+.++ +....+. .+...+..+.+++ ++..++ +.+. -..+..||+.+++
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~-s~~~---dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLL-SSGR---DNTVLLWNPESAE 296 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEE-EEES---SSEEEEECSSSCC
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEE-EEeC---CCCEEEeeCCCCc
Confidence 853 5666666663 237899999876 3434444 3456777888888 666544 4333 3579999998875
No 264
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.26 E-value=1.8e-09 Score=116.36 Aligned_cols=240 Identities=10% Similarity=-0.049 Sum_probs=151.9
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSN 215 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~ 215 (732)
.++|||||++|+..... ..|++||+.+++...............|+||++.|+....+
T Consensus 61 ~~~~s~~g~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----------------- 118 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLD-----GHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTE----------------- 118 (420)
T ss_dssp TCEEEEEETTEEEEEET-----TEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETT-----------------
T ss_pred ceeeeecCCeEEEEEcC-----CcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECC-----------------
Confidence 57899999999877532 37999999887743322111112455799999998887533
Q ss_pred cccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCc
Q 004766 216 LYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPF 295 (732)
Q Consensus 216 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 295 (732)
..|.+|++.++. .+.....+...+..++|+|||++|+..+.+ ..|.++|+.++. ..
T Consensus 119 --g~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~-------------~~ 174 (420)
T 3vl1_A 119 --GDIKVLDSNFNL----QREIDQAHVSEITKLKFFPSGEALISSSQD-----MQLKIWSVKDGS-------------NP 174 (420)
T ss_dssp --SCEEEECTTSCE----EEEETTSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCC-------------CC
T ss_pred --CCEEEEeCCCcc----eeeecccccCccEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCc-------------Cc
Confidence 258888876542 222222334566789999999988766533 348888988642 13
Q ss_pred EEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC-CCCceeEEE-----------------
Q 004766 296 VKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-ERDVLESAT----------------- 356 (732)
Q Consensus 296 ~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~l~~~~----------------- 356 (732)
..+........ ..|+|+++.|+..+.. ..|..+|+.++.....+..+. ....+..+.
T Consensus 175 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v 250 (420)
T 3vl1_A 175 RTLIGHRATVTDIAIIDRGRNVLSASLD----GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKK 250 (420)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETT----SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCC
T ss_pred eEEcCCCCcEEEEEEcCCCCEEEEEcCC----CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcc
Confidence 33332222222 2589999887755442 358888988775333332211 112333333
Q ss_pred ----EecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 357 ----AVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 357 ----~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+++++.+++....++ .|.+||+.+++....+... ...+..+.+++++..++++.+. -..++.||+.+++
T Consensus 251 ~~~~~s~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~---dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 251 NNLEFGTYGKYVIAGHVSG--VITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE---NGMLAQWDLRSPE 324 (420)
T ss_dssp CTTCSSCTTEEEEEEETTS--CEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEET---TSEEEEEETTCTT
T ss_pred cceEEcCCCCEEEEEcCCC--eEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeC---CCeEEEEEcCCCc
Confidence 345566777777774 6889999877765555432 5667888999998834444333 2689999998764
No 265
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.25 E-value=3.2e-10 Score=119.64 Aligned_cols=241 Identities=10% Similarity=0.031 Sum_probs=143.4
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-----ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-----LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-----~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
.+..++||||+++|+-+ .. .+|+|||+.+++.+... .....+..++|+|||+.|+....+
T Consensus 96 ~V~~~~~s~d~~~l~~s--~d----g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d--------- 160 (357)
T 4g56_B 96 GVTDVAWVSEKGILVAS--DS----GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD--------- 160 (357)
T ss_dssp CEEEEEEETTTEEEEEE--TT----SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT---------
T ss_pred CEEEEEEcCCCCEEEEE--CC----CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC---------
Confidence 47789999999866522 22 36999999988743211 111124789999999998876533
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
..|.+|++.++. .+.....+...+..++|+|++..+++..... ..|.++|+.++...
T Consensus 161 ----------g~v~iwd~~~~~----~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~d----g~v~~wd~~~~~~~----- 217 (357)
T 4g56_B 161 ----------FSVKVWDLSQKA----VLKSYNAHSSEVNCVAACPGKDTIFLSCGED----GRILLWDTRKPKPA----- 217 (357)
T ss_dssp ----------SCEEEEETTTTE----EEEEECCCSSCEEEEEECTTCSSCEEEEETT----SCEEECCTTSSSCB-----
T ss_pred ----------CeEEEEECCCCc----EEEEEcCCCCCEEEEEEccCCCceeeeeccC----CceEEEECCCCcee-----
Confidence 258889987653 2222222334566899999998665554432 23778888764311
Q ss_pred ccCCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEE
Q 004766 288 KRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIV 365 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~ 365 (732)
........... ....|+|++..++..... ...|..+|+.++.....+..+. ..+..+.++++ ..+++
T Consensus 218 ------~~~~~~~~~~~v~~v~~sp~~~~~la~g~~---d~~i~~wd~~~~~~~~~~~~~~--~~v~~l~~sp~~~~~la 286 (357)
T 4g56_B 218 ------TRIDFCASDTIPTSVTWHPEKDDTFACGDE---TGNVSLVNIKNPDSAQTSAVHS--QNITGLAYSYHSSPFLA 286 (357)
T ss_dssp ------CBCCCTTCCSCEEEEEECTTSTTEEEEEES---SSCEEEEESSCGGGCEEECCCS--SCEEEEEECSSSSCCEE
T ss_pred ------eeeeeccccccccchhhhhcccceEEEeec---ccceeEEECCCCcEeEEEeccc--eeEEEEEEcCCCCCEEE
Confidence 00011111111 122488887666554433 3468888998876445554443 56788899875 46777
Q ss_pred EEecCCeeEEEEEeCCCCceeeecccccceeeEeeccc-CCcEEEEEEecCCCCceEEEEECCCC
Q 004766 366 SYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARR-EDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 366 ~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~-d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+...++ .|++||+++++.++.+ .+.+.|..++++| |+.. +++.+. -..+..+++.+.
T Consensus 287 sgs~D~--~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~-l~s~s~---Dg~v~iW~~~~~ 344 (357)
T 4g56_B 287 SISEDC--TVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSK-FTTVGW---DHKVLHHHLPSE 344 (357)
T ss_dssp EEETTS--CEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTE-EEEEET---TSCEEEEECC--
T ss_pred EEeCCC--EEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCE-EEEEcC---CCeEEEEECCCC
Confidence 777774 6889999888765444 2466788889998 5654 444443 246888887543
No 266
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=99.25 E-value=1.2e-12 Score=144.61 Aligned_cols=227 Identities=18% Similarity=0.193 Sum_probs=134.0
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCccCCC-CcChhH---HHHHHhcCcEEEEEcccCCC-CC--chhHHhcccccC
Q 004766 465 IPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP-SFSVSR---TILMRHLGAVFCIANIRGGG-EY--GEEWHKGGALAK 537 (732)
Q Consensus 465 i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~-~~~~~~---~~~l~~~G~~v~~~~~rG~g-~~--g~~~~~~~~~~~ 537 (732)
+.+.++.|+.....++.|+||++|||....... .+.... ..+..+.|++|+.+|||.+. +| +.+... ...
T Consensus 98 l~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~---~~~ 174 (534)
T 1llf_A 98 LTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKA---EGS 174 (534)
T ss_dssp CEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH---HTC
T ss_pred eEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccc---cCC
Confidence 566778887654456789999999985432222 233321 11223368999999999753 11 111111 123
Q ss_pred CccHHHHHHHHHHHHHHc---CCCCCCcEEEEecChhHHHHHHHHhhC--------CCeeeEEEEcCCcccccccccCCC
Q 004766 538 KQNCFDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQR--------PDLFGCALAHVGVMDMLRYHKFTI 606 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~--------p~~f~a~v~~~p~~d~~~~~~~~~ 606 (732)
....+.|+.+|++|+.++ --.||+||.|+|+|+||.+++.++... +.+|+++|+.+|............
T Consensus 175 ~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~~~~~~~~~~~ 254 (534)
T 1llf_A 175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAMVPSDPVDGTY 254 (534)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCSCCCCCTTSHH
T ss_pred CchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCcccCCCcChHH
Confidence 345689999999999876 236999999999999999888777653 568999999998532211110000
Q ss_pred CC----ccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCC
Q 004766 607 GH----AWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTS 682 (732)
Q Consensus 607 ~~----~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~ 682 (732)
.. ......|++...+..+.|++.++-..++.... ...........+.....-|..+.+.++.++.++.+..
T Consensus 255 ~~~~~~~~~~~~gc~~~~~~l~cLr~~~~~~l~~a~~~-~~~~~~~~~~~~~f~P~~Dg~~l~~~p~~~~~~g~~~---- 329 (534)
T 1llf_A 255 GNEIYDLFVSSAGCGSASDKLACLRSASSDTLLDATNN-TPGFLAYSSLRLSYLPRPDGKNITDDMYKLVRDGKYA---- 329 (534)
T ss_dssp HHHHHHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHHHT-SCCTTSTTTTSCSSCCCCCSSSSCSCHHHHHHTTCSC----
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHHHcCCHHHHHHHHHh-cccccccccccccceeecCCccccCCHHHHHHcCCCC----
Confidence 00 11133566543345666766654322211000 0000000000112233447778888888776654433
Q ss_pred CCCCCCCCCEEEEEeCCCCCCCC
Q 004766 683 LENSPQTNPIIGRIERKAGHGVG 705 (732)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~gH~~~ 705 (732)
++|+.+-...++||.+.
T Consensus 330 ------~vp~l~G~~~~Eg~~f~ 346 (534)
T 1llf_A 330 ------SVPVIIGDQNDEGTIFG 346 (534)
T ss_dssp ------CCCEEEEEETBTTHHHH
T ss_pred ------CCCEEEEEecCchhhhh
Confidence 78999999999998763
No 267
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.24 E-value=4.8e-09 Score=109.77 Aligned_cols=224 Identities=9% Similarity=0.001 Sum_probs=142.7
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce---eccc--ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV---EADA--LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~---~~~~--~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
.+..+.|||||++||.... ...|++||+.+++. +... ........+.|++|++ |+....
T Consensus 99 ~v~~~~~s~~~~~l~s~~~-----d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~---------- 162 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGL-----DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSG---------- 162 (340)
T ss_dssp CEEEEEECTTSSEEEEEET-----TCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEET----------
T ss_pred cEEEEEECCCCCEEEEEeC-----CCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEEC----------
Confidence 3667899999999886632 24899999987641 1111 1111246788999886 554432
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
...|.+|++.++.. +..+. .+...+..++|+|||++++..+.++ .+.++|+.++.
T Consensus 163 ---------d~~i~~wd~~~~~~--~~~~~--~h~~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~~~~~------- 217 (340)
T 1got_B 163 ---------DTTCALWDIETGQQ--TTTFT--GHTGDVMSLSLAPDTRLFVSGACDA-----SAKLWDVREGM------- 217 (340)
T ss_dssp ---------TSCEEEEETTTTEE--EEEEC--CCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCS-------
T ss_pred ---------CCcEEEEECCCCcE--EEEEc--CCCCceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCe-------
Confidence 23588899876532 12232 2334567899999999887655433 37788987642
Q ss_pred ccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEE
Q 004766 288 KRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVS 366 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~ 366 (732)
....+....... ...|+|+|+.|+..+.. ..|..+|+.++.....+..+.....+..+.+++++.++++
T Consensus 218 ------~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d----~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 287 (340)
T 1got_B 218 ------CRQTFTGHESDINAICFFPNGNAFATGSDD----ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA 287 (340)
T ss_dssp ------EEEEECCCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred ------eEEEEcCCcCCEEEEEEcCCCCEEEEEcCC----CcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEE
Confidence 122222211111 22589999877755432 3588889877652222222221235788899987778888
Q ss_pred EecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEE
Q 004766 367 YLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVF 409 (732)
Q Consensus 367 ~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~ 409 (732)
...++ .|.+||..+++.+..+..+.+.|..+.+++++..++
T Consensus 288 g~~d~--~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~ 328 (340)
T 1got_B 288 GYDDF--NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA 328 (340)
T ss_dssp EETTS--EEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred ECCCC--eEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEE
Confidence 87774 789999887776666665677788889999987554
No 268
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.23 E-value=1.5e-09 Score=111.61 Aligned_cols=223 Identities=11% Similarity=0.004 Sum_probs=143.1
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+....|+|||++|+... ...+|++||+.+|+.+.... .......++|+||++.|+....+
T Consensus 57 ~v~~~~~~~~~~~l~s~s-----~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D------------- 118 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGS-----DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD------------- 118 (304)
T ss_dssp CEEEEEEEGGGTEEEEEE-----TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT-------------
T ss_pred cEEEEEEeCCCCEEEEEC-----CCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCC-------------
Confidence 366889999999988653 22589999999998543221 12234789999999988866533
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec-CCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
..|.+|++.++... ...+. .+...+..++|+| |+..|+..+.+ ..|.++|+.+..
T Consensus 119 ------~~v~lWd~~~~~~~-~~~~~--~h~~~v~~v~~~p~~~~~l~sgs~D-----~~v~iwd~~~~~---------- 174 (304)
T 2ynn_A 119 ------LTVKLWNWENNWAL-EQTFE--GHEHFVMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQST---------- 174 (304)
T ss_dssp ------SCEEEEEGGGTTEE-EEEEC--CCCSCEEEEEECTTCTTEEEEEETT-----SEEEEEETTCSS----------
T ss_pred ------CeEEEEECCCCcch-hhhhc--ccCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEECCCCC----------
Confidence 35888898764321 12232 2334567899999 56776654432 347888886532
Q ss_pred CCCCcEEeeecccce--EEEEEe--cCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEE
Q 004766 291 GLLPFVKLIDGFDAQ--YEVIAN--DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVS 366 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~--~~~~s~--dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~ 366 (732)
+...+..+.... ...+++ ++..|+..+. ...|..+|+.++.....+..+. ..+..+.+.+++.++++
T Consensus 175 ---~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~----D~~i~iWd~~~~~~~~~~~~h~--~~v~~~~~~p~~~~l~s 245 (304)
T 2ynn_A 175 ---PNFTLTTGQERGVNYVDYYPLPDKPYMITASD----DLTIKIWDYQTKSCVATLEGHM--SNVSFAVFHPTLPIIIS 245 (304)
T ss_dssp ---CSEEEECCCTTCEEEEEECCSTTCCEEEEEET----TSEEEEEETTTTEEEEEEECCS--SCEEEEEECSSSSEEEE
T ss_pred ---ccceeccCCcCcEEEEEEEEcCCCCEEEEEcC----CCeEEEEeCCCCccceeeCCCC--CCEEEEEECCCCCEEEE
Confidence 122232222222 223555 4555544332 3468889998876445555554 56778888887778888
Q ss_pred EecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEE
Q 004766 367 YLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVV 408 (732)
Q Consensus 367 ~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l 408 (732)
...++ .|.+||+.+++..+.+..+...+..+++.+++...
T Consensus 246 ~s~Dg--~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (304)
T 2ynn_A 246 GSEDG--TLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (304)
T ss_dssp EETTS--CEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGG
T ss_pred EcCCC--eEEEEECCCCceeeeccCCCccEEEEEECCCCCce
Confidence 88885 68899998888777776655556677767776543
No 269
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.23 E-value=2e-09 Score=121.20 Aligned_cols=219 Identities=12% Similarity=0.086 Sum_probs=141.8
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
.+..+.+||||++||.... ...|++||..+...............++|+|||+.|+....+
T Consensus 346 ~v~~~~~s~~g~~l~~~~~-----dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d-------------- 406 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASD-----DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD-------------- 406 (577)
T ss_dssp CEEEEEECTTSSEEEEEET-----TSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETT--------------
T ss_pred CEEEEEECCCCCEEEEEeC-----CCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCC--------------
Confidence 4667899999999987642 237899996543222212122234789999999998876532
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
..|.+|+.... .+..+. .+...+..++||||+++|+....+ ..+.++++.+.
T Consensus 407 -----~~v~~~~~~~~---~~~~~~--~~~~~v~~~~~s~d~~~l~~~~~d-----~~v~~w~~~~~------------- 458 (577)
T 2ymu_A 407 -----KTVKLWNRNGQ---LLQTLT--GHSSSVWGVAFSPDDQTIASASDD-----KTVKLWNRNGQ------------- 458 (577)
T ss_dssp -----SEEEEECTTCC---EEEEEE--CCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTSC-------------
T ss_pred -----CEEEEEeCCCC---EEEEec--CCCCCeEEEEECCCCCEEEEEcCC-----CEEEEEECCCC-------------
Confidence 35777775422 111222 223345689999999998876543 34777786542
Q ss_pred CCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 293 LPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 293 ~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
....+........ ..|+|||+.|+..+. +..|..+|..+ .....+..+. ..+..+.+++++.++++...++
T Consensus 459 -~~~~~~~~~~~v~~~~~spd~~~las~~~----d~~i~iw~~~~-~~~~~~~~h~--~~v~~l~~s~dg~~l~s~~~dg 530 (577)
T 2ymu_A 459 -LLQTLTGHSSSVRGVAFSPDGQTIASASD----DKTVKLWNRNG-QLLQTLTGHS--SSVRGVAFSPDGQTIASASDDK 530 (577)
T ss_dssp -EEEEEECCSSCEEEEEECTTSCEEEEEET----TSEEEEEETTS-CEEEEEECCS--SCEEEEEECTTSSCEEEEETTS
T ss_pred -EEEEEcCCCCCEEEEEEcCCCCEEEEEeC----CCEEEEEcCCC-CEEEEEeCCC--CCEEEEEEcCCCCEEEEEECcC
Confidence 1223332222212 258999987775443 23677788654 3345555554 5688899998777777887775
Q ss_pred eeEEEEEeCCCCceeeecccccceeeEeecccCCcEEE
Q 004766 372 KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVF 409 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~ 409 (732)
.|++||.. |+.+..+..+.+.|..+.+++|++.|+
T Consensus 531 --~v~lwd~~-~~~~~~~~~h~~~v~~~~fs~dg~~l~ 565 (577)
T 2ymu_A 531 --TVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIA 565 (577)
T ss_dssp --EEEEECTT-SCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred --EEEEEeCC-CCEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 68899974 777677766677788899999998654
No 270
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.23 E-value=1e-09 Score=114.81 Aligned_cols=243 Identities=11% Similarity=0.088 Sum_probs=139.9
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccce--eeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWF--KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~--~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
++.++++++.++... . + .+|+++|+++++.+....... ....++|+|||+.++++..
T Consensus 4 g~~~~~~~~~~v~~~-~--~--~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~---------------- 62 (349)
T 1jmx_B 4 GPALKAGHEYMIVTN-Y--P--NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN---------------- 62 (349)
T ss_dssp CCCCCTTCEEEEEEE-T--T--TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET----------------
T ss_pred cccccCCCEEEEEeC-C--C--CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC----------------
Confidence 456788877555332 1 2 389999999998653221111 2367999999998887642
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCC----CeeEEEeEEecCCcEEEEEEecC----C---cceEEEEEEeCCCCCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEH----PKYIFSGHVTEDGQYLVMCIEEN----C---DPVNKVYYCDLSALPEG 282 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~----~~~~~~~~~SpDg~~l~~~~~~~----~---~~~~~l~~~d~~~~~~~ 282 (732)
....|+++++.++... ........ ......+++||||++|++..... . .....|+++|++++...
T Consensus 63 --~~~~i~~~d~~t~~~~--~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 138 (349)
T 1jmx_B 63 --HYGDIYGIDLDTCKNT--FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA 138 (349)
T ss_dssp --TTTEEEEEETTTTEEE--EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB
T ss_pred --CCCcEEEEeCCCCcEE--EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc
Confidence 2346899998765321 12222111 01123678999999998876430 0 00256999998763210
Q ss_pred cccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCC--------------
Q 004766 283 LEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE-------------- 348 (732)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~-------------- 348 (732)
................|+|||+ +|+..+ .|+++|+++++. ...++...
T Consensus 139 ----------~~~~~~~~~~~~~~~~~s~dg~-l~~~~~------~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 200 (349)
T 1jmx_B 139 ----------KPVRTFPMPRQVYLMRAADDGS-LYVAGP------DIYKMDVKTGKY-TVALPLRNWNRKGYSAPDVLYF 200 (349)
T ss_dssp ----------CCSEEEECCSSCCCEEECTTSC-EEEESS------SEEEECTTTCCE-EEEECSTTCCCTTBCCCBCCCC
T ss_pred ----------ceeeeccCCCcccceeECCCCc-EEEccC------cEEEEeCCCCce-eccccccccCCccccCccceee
Confidence 1111221111122224899998 666321 388888877652 22222110
Q ss_pred -----------------------------------------------------CCceeEEEEec-CCEEEEEEecCCeeE
Q 004766 349 -----------------------------------------------------RDVLESATAVN-LNQMIVSYLSDVKYV 374 (732)
Q Consensus 349 -----------------------------------------------------~~~l~~~~~~~-~~~l~~~~~~~g~~~ 374 (732)
.....++.+++ ++..++.. ...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~----~~~ 276 (349)
T 1jmx_B 201 WPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV----LNR 276 (349)
T ss_dssp CCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE----ESE
T ss_pred ecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE----cCe
Confidence 00122334445 54433333 358
Q ss_pred EEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 375 LQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 375 l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
|++||+.+++.++.+..+ ..+..+.++++++.+++. + .-..++.+|+.+++
T Consensus 277 v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~--~--~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 277 LAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLG--G--TFNDLAVFNPDTLE 327 (349)
T ss_dssp EEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEE--S--BSSEEEEEETTTTE
T ss_pred EEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEe--c--CCCeEEEEeccccc
Confidence 999999888765666543 234567888999888763 2 22789999998774
No 271
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.22 E-value=2.7e-09 Score=113.43 Aligned_cols=243 Identities=8% Similarity=-0.017 Sum_probs=146.9
Q ss_pred EEeEEECCCC-cEEEEEEeccCCceEEEEEEECCCCceeccc---ccceeeeeEEEEe-CCcEEEEEEecCCCCCCCCCC
Q 004766 134 LIKVSVSEDA-KYLAYALSYSGSDWATIKLMRIEDQIVEADA---LSWFKFSSIAWTH-DSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 134 ~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~---~~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~~~~ 208 (732)
+..++||||| ++||.... + ..|+|||+.+++..... ........++|+| |++.|+....
T Consensus 76 v~~~~~~~~~~~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~----------- 139 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGSK-G----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI----------- 139 (383)
T ss_dssp EEEEEECSSCTTEEEEEEB-T----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET-----------
T ss_pred EEEEEECCCCCCEEEEEcC-C----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC-----------
Confidence 5688999999 77776542 2 37999999988743221 1222357899999 5666665543
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEec-CCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKD-PEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
...|.+|++.+.. ...+.. ......+..++|+|||++|+....+ ..|+++|+.+.
T Consensus 140 --------d~~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~-------- 195 (383)
T 3ei3_B 140 --------RGATTLRDFSGSV---IQVFAKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGH-------- 195 (383)
T ss_dssp --------TTEEEEEETTSCE---EEEEECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSC--------
T ss_pred --------CCEEEEEECCCCc---eEEEeccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCC--------
Confidence 2368899987521 222222 2122456789999999998766533 35888898542
Q ss_pred ccCCCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCC---CceEeccCCCCCceeEEEEec-CCE
Q 004766 288 KRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN---DWFEVIPEAERDVLESATAVN-LNQ 362 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~---~~~~l~~~~~~~~l~~~~~~~-~~~ 362 (732)
+...+........ ..|+|+++.+++.... ...|..+|+.+.. .......+. ..+..+.+++ ++.
T Consensus 196 ------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~ 264 (383)
T 3ei3_B 196 ------EIFKEKLHKAKVTHAEFNPRCDWLMATSSV---DATVKLWDLRNIKDKNSYIAEMPHE--KPVNAAYFNPTDST 264 (383)
T ss_dssp ------EEEEEECSSSCEEEEEECSSCTTEEEEEET---TSEEEEEEGGGCCSTTCEEEEEECS--SCEEEEEECTTTSC
T ss_pred ------EEEEeccCCCcEEEEEECCCCCCEEEEEeC---CCEEEEEeCCCCCcccceEEEecCC--CceEEEEEcCCCCC
Confidence 1333332222222 2589998844444433 3468888887632 122333443 5688899998 777
Q ss_pred EEEEEecCCeeEEEEEeCCCCceeeecccc-------cceeeEeecccCCcEEEEEEe-----cCCCCceEEEEECCCCC
Q 004766 363 MIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-------IGSVNAISARREDSVVFISFT-----SFLIPGIVYQCNLKTET 430 (732)
Q Consensus 363 l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-------~g~v~~~~~s~d~~~l~~~~s-----s~~~p~~~y~~d~~~~~ 430 (732)
++++...+ ..|.+||+.+++....+... ...+ ...+++++..+.+.++ +-..-..++.||+.+++
T Consensus 265 ~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 265 KLLTTDQR--NEIRVYSSYDWSKPDQIIIHPHRQFQHLTPI-KATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGG 341 (383)
T ss_dssp EEEEEESS--SEEEEEETTBTTSCSEEEECCBCCCTTSCCC-CCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCC
T ss_pred EEEEEcCC--CcEEEEECCCCccccccccccccccccccce-EEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCc
Confidence 77777776 47999999877654444321 1112 1234455554444433 22345789999998875
No 272
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.22 E-value=2.8e-09 Score=112.47 Aligned_cols=241 Identities=8% Similarity=-0.012 Sum_probs=147.9
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc--eecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI--VEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~--~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
+..++|||||++||.... ...|++||+++++ .+.. .........++|+||++.|+....+
T Consensus 11 i~~~~~s~~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------------ 73 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPN-----NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD------------ 73 (372)
T ss_dssp CCEEEECTTSSEEEEECS-----SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT------------
T ss_pred eEEEEECCCCCEEEEEeC-----CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC------------
Confidence 458899999999987632 2489999999885 3321 1122235789999999998877533
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
..|.+|++.++... ...........+..+.|+|||++|+....++. +.++++..+..
T Consensus 74 -------g~i~vwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-----v~i~d~~~~~~--------- 130 (372)
T 1k8k_C 74 -------RNAYVWTLKGRTWK--PTLVILRINRAARCVRWAPNEKKFAVGSGSRV-----ISICYFEQEND--------- 130 (372)
T ss_dssp -------SCEEEEEEETTEEE--EEEECCCCSSCEEEEEECTTSSEEEEEETTSS-----EEEEEEETTTT---------
T ss_pred -------CeEEEEECCCCeee--eeEEeecCCCceeEEEECCCCCEEEEEeCCCE-----EEEEEecCCCc---------
Confidence 25788887654311 12222223345678999999999987764433 55666654210
Q ss_pred CCCCcEEeeecccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCC------------------CCCCceEeccCCCCC
Q 004766 291 GLLPFVKLIDGFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLK------------------EPNDWFEVIPEAERD 350 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~------------------~~~~~~~l~~~~~~~ 350 (732)
......+.......+ ..|+|+++.|+..+.. ..|..+|+. .+.....+..+ ..
T Consensus 131 -~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 203 (372)
T 1k8k_C 131 -WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS--CG 203 (372)
T ss_dssp -EEEEEEECTTCCSCEEEEEECTTSSEEEEEETT----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC--SS
T ss_pred -ceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC----CCEEEEEcccccccccccccccccccchhhheEecCCC--CC
Confidence 000111111111222 2488988877765432 357777753 23322222222 35
Q ss_pred ceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 351 VLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 351 ~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
.+..+.+++++.++++...++ .|.+||+.+++.+..+..+...+..+.+++++..++.. + -..++.|++.+
T Consensus 204 ~v~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~---d~~i~i~~~~~ 274 (372)
T 1k8k_C 204 WVHGVCFSANGSRVAWVSHDS--TVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG--H---DCFPVLFTYDS 274 (372)
T ss_dssp CEEEEEECSSSSEEEEEETTT--EEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE--T---TSSCEEEEEET
T ss_pred eEEEEEECCCCCEEEEEeCCC--EEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE--e---CCeEEEEEccC
Confidence 678899988666777777774 68999998888766776666677788888888744322 2 24556666655
No 273
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.22 E-value=4.6e-09 Score=118.30 Aligned_cols=234 Identities=14% Similarity=0.100 Sum_probs=152.1
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
..+..+.+||||++|+.... + ..|++||+.+...............++|+|||+.|+....+
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~-d----~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d------------- 365 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASD-D----KTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDD------------- 365 (577)
T ss_dssp SCEEEEEECTTSSEEEEEET-T----SCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------
T ss_pred CCeEEEEECCCCCEEEEEeC-C----CeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCC-------------
Confidence 34667899999999986642 2 36899998776643322222234679999999999876532
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
..|.+|+.... ++.....+...+..+++||||++|+....+ ..|.+++..+.
T Consensus 366 ------g~v~~~~~~~~-----~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d-----~~v~~~~~~~~------------ 417 (577)
T 2ymu_A 366 ------KTVKLWNRNGQ-----LLQTLTGHSSSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQ------------ 417 (577)
T ss_dssp ------SEEEEEETTCC-----EEEEEECCSSCEEEEEECTTSSCEEEEETT-----SEEEEECTTCC------------
T ss_pred ------CEEEEEcCCCC-----EEEEecCCCCCeEEEEECCCCCEEEEEeCC-----CEEEEEeCCCC------------
Confidence 25777775321 222212223345689999999998766533 34777775431
Q ss_pred CCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecC
Q 004766 292 LLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSD 370 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~ 370 (732)
....+........ ..|+||++.|+..+. +..|..+|+.+.. ...+..+. ..+..+.+++++.++++...+
T Consensus 418 --~~~~~~~~~~~v~~~~~s~d~~~l~~~~~----d~~v~~w~~~~~~-~~~~~~~~--~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 418 --LLQTLTGHSSSVWGVAFSPDDQTIASASD----DKTVKLWNRNGQL-LQTLTGHS--SSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp --EEEEEECCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTSCE-EEEEECCS--SCEEEEEECTTSCEEEEEETT
T ss_pred --EEEEecCCCCCeEEEEECCCCCEEEEEcC----CCEEEEEECCCCE-EEEEcCCC--CCEEEEEEcCCCCEEEEEeCC
Confidence 1223332222222 248999988776543 2467788875443 45555554 568889999877788888777
Q ss_pred CeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 371 VKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 371 g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
+ .|++|+.. |+.++.+..+...|..+.++||++.|+ +.+. -..+..||..
T Consensus 489 ~--~i~iw~~~-~~~~~~~~~h~~~v~~l~~s~dg~~l~-s~~~---dg~v~lwd~~ 538 (577)
T 2ymu_A 489 K--TVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIA-SASD---DKTVKLWNRN 538 (577)
T ss_dssp S--EEEEEETT-SCEEEEEECCSSCEEEEEECTTSSCEE-EEET---TSEEEEECTT
T ss_pred C--EEEEEcCC-CCEEEEEeCCCCCEEEEEEcCCCCEEE-EEEC---cCEEEEEeCC
Confidence 4 68889975 777677776677788899999998665 3332 2568888863
No 274
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.21 E-value=1.4e-09 Score=114.09 Aligned_cols=227 Identities=11% Similarity=0.004 Sum_probs=133.1
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc----cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD----ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~----~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
+..++|||||++||.... ..+|+|||++++..... .........++|+|||+.|+....+.
T Consensus 19 v~~l~~sp~g~~las~~~-----D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~---------- 83 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGG-----DRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA---------- 83 (345)
T ss_dssp EEEEEECTTSSCEEEEET-----TSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS----------
T ss_pred EEEEEECCCCCEEEEEcC-----CCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC----------
Confidence 567899999999986632 24799999988763211 11112357899999999998876443
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
.+.+|++.++..+ .+.....+...+..++|+|||++|+..+.++. +.++|+.++..
T Consensus 84 ---------~v~iw~~~~~~~~--~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~-----v~iwd~~~~~~-------- 139 (345)
T 3fm0_A 84 ---------TTCIWKKNQDDFE--CVTTLEGHENEVKSVAWAPSGNLLATCSRDKS-----VWVWEVDEEDE-------- 139 (345)
T ss_dssp ---------CEEEEEECCC-EE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSC-----EEEEEECTTSC--------
T ss_pred ---------cEEEEEccCCCeE--EEEEccCCCCCceEEEEeCCCCEEEEEECCCe-----EEEEECCCCCC--------
Confidence 4677777654322 22222233445678999999999887664433 77777765320
Q ss_pred CCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC--CceEeccCCCCCceeEEEEecCCEEEEE
Q 004766 290 DGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN--DWFEVIPEAERDVLESATAVNLNQMIVS 366 (732)
Q Consensus 290 ~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~l~~~~~~~~~~l~~~ 366 (732)
......+...... ....|+|+++.|+..+..+ .|..+++.++. ....+..+. ..+..+.+++++.++++
T Consensus 140 --~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~----~i~~w~~~~~~~~~~~~~~~h~--~~v~~l~~sp~g~~l~s 211 (345)
T 3fm0_A 140 --YECVSVLNSHTQDVKHVVWHPSQELLASASYDD----TVKLYREEEDDWVCCATLEGHE--STVWSLAFDPSGQRLAS 211 (345)
T ss_dssp --EEEEEEECCCCSCEEEEEECSSSSCEEEEETTS----CEEEEEEETTEEEEEEEECCCS--SCEEEEEECTTSSEEEE
T ss_pred --eEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC----cEEEEEecCCCEEEEEEecCCC--CceEEEEECCCCCEEEE
Confidence 0001112111111 1235899998777655432 35556655543 112333333 56888999987777888
Q ss_pred EecCCeeEEEEEeCCCCce---------------eeeccc-ccceeeEeecccCCcEEE
Q 004766 367 YLSDVKYVLQIRDLKNGSL---------------LHQLPI-EIGSVNAISARREDSVVF 409 (732)
Q Consensus 367 ~~~~g~~~l~~~d~~~g~~---------------~~~l~~-~~g~v~~~~~s~d~~~l~ 409 (732)
...++ .|.+|+...+.. +..+.. +...+..+.+++++..++
T Consensus 212 ~s~D~--~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~ 268 (345)
T 3fm0_A 212 CSDDR--TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALA 268 (345)
T ss_dssp EETTS--CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEE
T ss_pred EeCCC--eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEE
Confidence 88885 466666421111 011111 234566777888877554
No 275
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.21 E-value=8.1e-10 Score=116.97 Aligned_cols=243 Identities=9% Similarity=0.004 Sum_probs=148.5
Q ss_pred EECCCCcEEEEEEecc------CCceEEEEEEECCCCce-ec-----ccc----cceeeeeEEEEeCCcEEEEEEecCCC
Q 004766 138 SVSEDAKYLAYALSYS------GSDWATIKLMRIEDQIV-EA-----DAL----SWFKFSSIAWTHDSKGFFYSRYPAPK 201 (732)
Q Consensus 138 ~~SPDG~~la~~~~~~------G~e~~~i~v~dl~~g~~-~~-----~~~----~~~~~~~~~WspDg~~l~y~~~~~~~ 201 (732)
+++|+++.++...+.+ |+...++++|++.++.. +. ... .......++|||||+.|+..+.
T Consensus 78 s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~---- 153 (365)
T 4h5i_A 78 AIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASS---- 153 (365)
T ss_dssp EEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEES----
T ss_pred EEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEEC----
Confidence 4567788877765432 33345788888766531 11 000 0001246899999999987752
Q ss_pred CCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCC
Q 004766 202 EGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPE 281 (732)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 281 (732)
.....|++|++.+... +..++. ...+.+++|||||++|+..+. + .+.+++..++..
T Consensus 154 -------------~~d~~i~iwd~~~~~~--~~~~~~---~~~V~~v~fspdg~~l~s~s~-~-----~~~~~~~~~~~~ 209 (365)
T 4h5i_A 154 -------------KVPAIMRIIDPSDLTE--KFEIET---RGEVKDLHFSTDGKVVAYITG-S-----SLEVISTVTGSC 209 (365)
T ss_dssp -------------CSSCEEEEEETTTTEE--EEEEEC---SSCCCEEEECTTSSEEEEECS-S-----CEEEEETTTCCE
T ss_pred -------------CCCCEEEEeECCCCcE--EEEeCC---CCceEEEEEccCCceEEeccc-e-----eEEEEEeccCcc
Confidence 2345789999877532 122222 223568999999999876542 1 245556554321
Q ss_pred CcccccccCCCCCcEEeee-cccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCC----ceEeccCCCCCceeE
Q 004766 282 GLEGFKKRDGLLPFVKLID-GFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND----WFEVIPEAERDVLES 354 (732)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~-~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~----~~~l~~~~~~~~l~~ 354 (732)
....+. .....+ ..|+|||+.++..+..+.....+..+++..... ...+..+ ...+..
T Consensus 210 -------------~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~V~~ 274 (365)
T 4h5i_A 210 -------------IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNR--FKGITS 274 (365)
T ss_dssp -------------EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESS--CSCEEE
T ss_pred -------------eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCC--CCCeEe
Confidence 111111 111111 248999988887665554455677777655431 1122233 256788
Q ss_pred EEEecCCEEEEEEecCCeeEEEEEeCCCCceeeec-ccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 355 ATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQL-PIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 355 ~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l-~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+.+++++.++++...|+ .|++||+.+++.+..+ ..+.+.|..++++||++.|+ +.+.. .++.++|+...
T Consensus 275 ~~~Spdg~~lasgs~D~--~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~la-S~S~D---~tvrvw~ip~~ 344 (365)
T 4h5i_A 275 MDVDMKGELAVLASNDN--SIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVA-SVSAA---NTIHIIKLPLN 344 (365)
T ss_dssp EEECTTSCEEEEEETTS--CEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEE-EEETT---SEEEEEECCTT
T ss_pred EEECCCCCceEEEcCCC--EEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEE-EEeCC---CeEEEEEcCCC
Confidence 99999888888888874 6899999988876654 44577888999999998553 44432 46777777543
No 276
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.20 E-value=5.1e-09 Score=111.99 Aligned_cols=216 Identities=19% Similarity=0.104 Sum_probs=135.4
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+..+.|||||++||.... ...|++||+++++.+.... .......++|+|||+.|+....+
T Consensus 125 ~v~~v~~s~dg~~l~s~~~-----d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d------------- 186 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAE-----DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD------------- 186 (393)
T ss_dssp BEEEEEECTTSSEEEEEET-----TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------
T ss_pred eEEEEEECCCCCEEEEEcC-----CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC-------------
Confidence 4778999999999986532 2479999999988543211 12234789999999988876533
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec-CCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
..|.+|++.++.. ...+... .....++++| ||++|+..+.++ .+.++|+.++..
T Consensus 187 ------~~v~iwd~~~~~~--~~~~~~~---~~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~--------- 241 (393)
T 1erj_A 187 ------RTVRIWDLRTGQC--SLTLSIE---DGVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFL--------- 241 (393)
T ss_dssp ------SEEEEEETTTTEE--EEEEECS---SCEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCE---------
T ss_pred ------CcEEEEECCCCee--EEEEEcC---CCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcE---------
Confidence 3688999877532 1222222 2346789999 899887665443 377788876421
Q ss_pred CCCCcEEe-------eecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCC------------CceEeccCCCCC
Q 004766 291 GLLPFVKL-------IDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN------------DWFEVIPEAERD 350 (732)
Q Consensus 291 ~~~~~~~l-------~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~------------~~~~l~~~~~~~ 350 (732)
...+ ........ ..|+|+|+.|+..+. ...|..+|+.+.. ....+..+. .
T Consensus 242 ----~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~----d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~--~ 311 (393)
T 1erj_A 242 ----VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL----DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK--D 311 (393)
T ss_dssp ----EEEEC------CCCSSCEEEEEECTTSSEEEEEET----TSEEEEEEC---------------CEEEEEECCS--S
T ss_pred ----EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC----CCEEEEEECCCCCCcccccCCCCCcceEEEeccc--C
Confidence 1111 11111111 248899987765443 2357777876532 112233333 4
Q ss_pred ceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeeccc
Q 004766 351 VLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARR 403 (732)
Q Consensus 351 ~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~ 403 (732)
.+..+.+++++.++++...++ .|++||+.+|+.+..+..+.+.|..+.+++
T Consensus 312 ~v~~~~~~~~~~~l~sgs~D~--~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~ 362 (393)
T 1erj_A 312 FVLSVATTQNDEYILSGSKDR--GVLFWDKKSGNPLLMLQGHRNSVISVAVAN 362 (393)
T ss_dssp CEEEEEECGGGCEEEEEETTS--EEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred cEEEEEECCCCCEEEEEeCCC--eEEEEECCCCeEEEEECCCCCCEEEEEecC
Confidence 567788887667777777774 789999988887666665556666666544
No 277
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.19 E-value=7.9e-09 Score=110.79 Aligned_cols=241 Identities=12% Similarity=0.038 Sum_probs=152.8
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+..++|||||++|+.... + ..|++||+.+++.+... ........++| +++.|+....
T Consensus 136 ~v~~v~~s~~~~~l~~~~~-d----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-------------- 194 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLG-N----GLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSR-------------- 194 (401)
T ss_dssp CEEEEEECTTSSEEEEEET-T----SCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEET--------------
T ss_pred CEEEEEECCCCCEEEEECC-C----CeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcC--------------
Confidence 4678999999999987753 2 37999999998854322 12223467888 5666766543
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
...|++|++.+.... +..+.. +...+..+.|+|||++|+....++ .|.++|+.++.
T Consensus 195 -----dg~i~i~d~~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~----------- 250 (401)
T 4aez_A 195 -----SGAIHHHDVRIANHQ-IGTLQG--HSSEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSI----------- 250 (401)
T ss_dssp -----TSEEEEEETTSSSCE-EEEEEC--CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSS-----------
T ss_pred -----CCCEEEEecccCcce-eeEEcC--CCCCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCC-----------
Confidence 346899998754321 222322 334567899999999988766443 38888987632
Q ss_pred CCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe--
Q 004766 292 LLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL-- 368 (732)
Q Consensus 292 ~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~-- 368 (732)
+...+..... .....|+|++..+++.... .....|..+|+.++.....+ .. ...+..+.+++++..++...
T Consensus 251 --~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g-s~d~~i~i~d~~~~~~~~~~-~~--~~~v~~~~~s~~~~~l~~~~g~ 324 (401)
T 4aez_A 251 --PKFTKTNHNAAVKAVAWCPWQSNLLATGGG-TMDKQIHFWNAATGARVNTV-DA--GSQVTSLIWSPHSKEIMSTHGF 324 (401)
T ss_dssp --EEEEECCCSSCCCEEEECTTSTTEEEEECC-TTTCEEEEEETTTCCEEEEE-EC--SSCEEEEEECSSSSEEEEEECT
T ss_pred --ccEEecCCcceEEEEEECCCCCCEEEEecC-CCCCEEEEEECCCCCEEEEE-eC--CCcEEEEEECCCCCeEEEEeec
Confidence 1222222211 1223589988887776531 12457999999887633333 33 25688899998666665543
Q ss_pred cCCeeEEEEEeCCCCceeee--cccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQ--LPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~--l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.+ ..|.+|++.+++.... +..+.+.+..+.+++++..++.. + .-..+..|++.+++
T Consensus 325 ~d--g~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~-~---~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 325 PD--NNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTA-A---SDENLKFWRVYDGD 382 (401)
T ss_dssp TT--CEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEE-C---TTSEEEEEECCC--
T ss_pred CC--CcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEE-e---CCCcEEEEECCCCc
Confidence 44 4788899876654333 23345667788899999866533 2 23689999988774
No 278
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.18 E-value=3.8e-11 Score=121.85 Aligned_cols=116 Identities=12% Similarity=0.084 Sum_probs=80.9
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| .++.+... +.+ ...|.||++||..++.. .|.. ....|+ .+|.|+++|.||.|..... ..
T Consensus 11 ~~g-~~l~y~~~-~~G----~~~p~vvllHG~~~~~~--~w~~-~~~~L~-~~~rvia~DlrGhG~S~~~--------~~ 72 (276)
T 2wj6_A 11 VFD-NKLSYIDN-QRD----TDGPAILLLPGWCHDHR--VYKY-LIQELD-ADFRVIVPNWRGHGLSPSE--------VP 72 (276)
T ss_dssp ETT-EEEEEEEC-CCC----CSSCEEEEECCTTCCGG--GGHH-HHHHHT-TTSCEEEECCTTCSSSCCC--------CC
T ss_pred eCC-eEEEEEEe-cCC----CCCCeEEEECCCCCcHH--HHHH-HHHHHh-cCCEEEEeCCCCCCCCCCC--------CC
Confidence 478 77765432 111 23488999999876543 4544 345577 7899999999998864321 12
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC-CCeeeEEEEcCC
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVG 594 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~~f~a~v~~~p 594 (732)
..+++++.+.+..|++. ...+++.++|+|+||.+++.++.++ |++++++|+..+
T Consensus 73 ~~~~~~~a~dl~~ll~~--l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~ 127 (276)
T 2wj6_A 73 DFGYQEQVKDALEILDQ--LGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDW 127 (276)
T ss_dssp CCCHHHHHHHHHHHHHH--HTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESC
T ss_pred CCCHHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecc
Confidence 23566666555555543 2335899999999999999999999 999999988754
No 279
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.18 E-value=1.7e-08 Score=112.43 Aligned_cols=251 Identities=12% Similarity=0.011 Sum_probs=151.1
Q ss_pred EEeEEECC----CCcEEEEEEeccCCceEEEEEEECCCCceeccccc------------ceeeeeEEEEeCCcEEEEEEe
Q 004766 134 LIKVSVSE----DAKYLAYALSYSGSDWATIKLMRIEDQIVEADALS------------WFKFSSIAWTHDSKGFFYSRY 197 (732)
Q Consensus 134 ~~~~~~SP----DG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~------------~~~~~~~~WspDg~~l~y~~~ 197 (732)
...+.+|| ||++|+.+.... .+|.|||..+++.+..... ......+.+|||++.++++..
T Consensus 224 p~~va~sp~~~~dg~~l~v~~~~~----~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 224 ARSVESSKFKGYEDRYTIAGAYWP----PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEES----SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cceEEeCCCcCCCCCEEEEEEccC----CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 45788999 999886654222 3789999999886532111 112367899999998877642
Q ss_pred cCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCC
Q 004766 198 PAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS 277 (732)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 277 (732)
...+|++++..+.....+..... ..+..++.|||||++++..... .+.|.++|+.
T Consensus 300 ------------------~~g~i~vvd~~~~~~l~~~~i~~---~~~~~~~~~spdg~~l~va~~~----~~~v~v~D~~ 354 (543)
T 1nir_A 300 ------------------ETGKVLLVNYKDIDNLTVTSIGA---APFLHDGGWDSSHRYFMTAANN----SNKVAVIDSK 354 (543)
T ss_dssp ------------------TTTEEEEEECTTSSSCEEEEEEC---CSSCCCEEECTTSCEEEEEEGG----GTEEEEEETT
T ss_pred ------------------CCCeEEEEEecCCCcceeEEecc---CcCccCceECCCCCEEEEEecC----CCeEEEEECC
Confidence 23479999987653221111221 2234578999999998665432 2458889988
Q ss_pred CCCCCcccccccCCCCCcEEeeec----ccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCC-------CCCceEeccC
Q 004766 278 ALPEGLEGFKKRDGLLPFVKLIDG----FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE-------PNDWFEVIPE 346 (732)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~-------~~~~~~l~~~ 346 (732)
+++. ...+..+ .......++|++..+|+..+.+ ...|.++|+++ .+..+++-.+
T Consensus 355 tg~l-------------~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~--d~~V~v~d~~~~~~~~~~~~~v~~l~~~ 419 (543)
T 1nir_A 355 DRRL-------------SALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG--DGSISLIGTDPKNHPQYAWKKVAELQGQ 419 (543)
T ss_dssp TTEE-------------EEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEEECCTTTCTTTBTSEEEEEECS
T ss_pred CCeE-------------EEeeccCCCCCCCCCcccCCCCCccEEEeccCC--CceEEEEEeCCCCCchhcCeEEEEEEcC
Confidence 7531 1112111 1112233567767776654432 23577788776 2223333323
Q ss_pred CCCCceeEEEEecCCEEEEEEec-C----CeeEEEEEeCCCCcee-eeccc--------ccceeeEeecccCCcEEEEEE
Q 004766 347 AERDVLESATAVNLNQMIVSYLS-D----VKYVLQIRDLKNGSLL-HQLPI--------EIGSVNAISARREDSVVFISF 412 (732)
Q Consensus 347 ~~~~~l~~~~~~~~~~l~~~~~~-~----g~~~l~~~d~~~g~~~-~~l~~--------~~g~v~~~~~s~d~~~l~~~~ 412 (732)
. .....+.+++++..++.... + ....|.+||.++++.. +.|.. +...+..+.+++||++++++.
T Consensus 420 g--~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~ 497 (543)
T 1nir_A 420 G--GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSV 497 (543)
T ss_dssp C--SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEE
T ss_pred C--CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEe
Confidence 2 22334667776444444331 1 1247999999988764 34321 133456788999999999876
Q ss_pred ec-CCCCceEEEEECCCCC
Q 004766 413 TS-FLIPGIVYQCNLKTET 430 (732)
Q Consensus 413 ss-~~~p~~~y~~d~~~~~ 430 (732)
-+ -.....|.++|..+++
T Consensus 498 ~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 498 WNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp ECCTTSCCEEEEEETTTTE
T ss_pred ecCCCCCCeEEEEECCCce
Confidence 43 2457899999998885
No 280
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.18 E-value=6.1e-10 Score=119.67 Aligned_cols=250 Identities=11% Similarity=0.016 Sum_probs=152.2
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC---C-ceec-ccccceeeeeEEEEeC-CcEEEEEEecCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED---Q-IVEA-DALSWFKFSSIAWTHD-SKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~---g-~~~~-~~~~~~~~~~~~WspD-g~~l~y~~~~~~~~~~~ 205 (732)
..+..+.|||||++||.... + ..|++||+.+ + +.+. ..........++|+|| ++.|+....
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~-d----g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-------- 134 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALD-N----GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGN-------- 134 (416)
T ss_dssp SCEEEEEECSSSSCEEEEES-S----SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECS--------
T ss_pred CceEEEEECCCCCeEEEEcc-C----CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcC--------
Confidence 34778999999999987643 2 3789999987 2 2222 1112223478999999 665655432
Q ss_pred CCCCCcccCCcccEEEEEECCCCCC-----CCeEEEecCCCCeeEEEeEEecCC-cEEEEEEecCCcceEEEEEEeCCCC
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQS-----EDILCWKDPEHPKYIFSGHVTEDG-QYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~-----~~~~v~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
...|++|++.+... ....+.....+...+..++|+|++ ..|+....+ ..|.++|+.++
T Consensus 135 -----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~ 198 (416)
T 2pm9_A 135 -----------NGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS-----NFASIWDLKAK 198 (416)
T ss_dssp -----------SSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS-----SCEEEEETTTT
T ss_pred -----------CCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC-----CCEEEEECCCC
Confidence 23588888876541 101110011122344688999994 555443322 34888898763
Q ss_pred CCCcccccccCCCCCcEEeeec------cc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-CceEec-cCCCCC
Q 004766 280 PEGLEGFKKRDGLLPFVKLIDG------FD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVI-PEAERD 350 (732)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~------~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~-~~~~~~ 350 (732)
. ....+... .. .....|+|++..+++....++....|..+|+.++. ....+. .+ ..
T Consensus 199 ~-------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~--~~ 263 (416)
T 2pm9_A 199 K-------------EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGH--QK 263 (416)
T ss_dssp E-------------EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCC--SS
T ss_pred C-------------cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCc--cC
Confidence 2 11122111 11 11225899886555555444333368888988753 223332 23 35
Q ss_pred ceeEEEEec-CCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 351 VLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 351 ~l~~~~~~~-~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.+..+.+++ ++.++++...++ .|++||+.+++.+..+..+.+.+..+.++++++.++++.+. -..+..||+.++
T Consensus 264 ~v~~~~~s~~~~~~l~s~~~dg--~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~---d~~i~iw~~~~~ 338 (416)
T 2pm9_A 264 GILSLDWCHQDEHLLLSSGRDN--TVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASF---DNKIEVQTLQNL 338 (416)
T ss_dssp CEEEEEECSSCSSCEEEEESSS--EEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCS---SSEEEEEESCCC
T ss_pred ceeEEEeCCCCCCeEEEEeCCC--CEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEec---CCcEEEEEccCC
Confidence 688899987 677777777774 68999998888767776566677788899998445444433 367888888766
Q ss_pred C
Q 004766 430 T 430 (732)
Q Consensus 430 ~ 430 (732)
+
T Consensus 339 ~ 339 (416)
T 2pm9_A 339 T 339 (416)
T ss_dssp C
T ss_pred C
Confidence 3
No 281
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.18 E-value=4.1e-09 Score=119.49 Aligned_cols=244 Identities=9% Similarity=-0.044 Sum_probs=155.6
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCC----ceec-cccccee-eeeEEEEe--CCcEEEEEEecCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQ----IVEA-DALSWFK-FSSIAWTH--DSKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g----~~~~-~~~~~~~-~~~~~Wsp--Dg~~l~y~~~~~~~~~~~ 205 (732)
+..++|||||++||+.. + ..|++||++++ +... ....... ...++|+| ||+.|+....+
T Consensus 21 v~~~~~spdg~~l~~~~--~----~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~d------- 87 (615)
T 1pgu_A 21 TTHLSYDPTTNAIAYPC--G----KSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDES------- 87 (615)
T ss_dssp CCCCEEETTTTEEEEEE--T----TEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETT-------
T ss_pred eeEEEECCCCCEEEEec--C----CeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCC-------
Confidence 45789999999999986 2 27999999988 5332 1122223 47899999 99988876533
Q ss_pred CCCCCcccCCcccEEEEEECCCCCC----CCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCC
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQS----EDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPE 281 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~----~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 281 (732)
..|.+|++.++.. +...+.........+..++|+|||++|+....+.. ....+++++...
T Consensus 88 ------------g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-~~~~v~~~d~~~--- 151 (615)
T 1pgu_A 88 ------------GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD-NFGVFISWDSGN--- 151 (615)
T ss_dssp ------------SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSS-CSEEEEETTTCC---
T ss_pred ------------CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCC-CccEEEEEECCC---
Confidence 3578888754310 01122222222345678999999999988765432 235688877322
Q ss_pred CcccccccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCC---ceeEEEE
Q 004766 282 GLEGFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERD---VLESATA 357 (732)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~---~l~~~~~ 357 (732)
....+....... ...|+|+++.+++.... ...|..+|+.++.....+..+. . .+..+.+
T Consensus 152 ------------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~v~vwd~~~~~~~~~~~~~~--~~~~~v~~~~~ 214 (615)
T 1pgu_A 152 ------------SLGEVSGHSQRINACHLKQSRPMRSMTVGD---DGSVVFYQGPPFKFSASDRTHH--KQGSFVRDVEF 214 (615)
T ss_dssp ------------EEEECCSCSSCEEEEEECSSSSCEEEEEET---TTEEEEEETTTBEEEEEECSSS--CTTCCEEEEEE
T ss_pred ------------cceeeecCCccEEEEEECCCCCcEEEEEeC---CCcEEEEeCCCcceeeeecccC--CCCceEEEEEE
Confidence 122222211111 12588988744444433 3468888987765333443333 3 6888999
Q ss_pred ecC-CEEEEEEecCCeeEEEEEeCCCCceeeec-c---cccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 358 VNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQL-P---IEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 358 ~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l-~---~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+++ +.+++....++ .|++||+.+++.+..+ . ...+.+..+.++ ++..++.. +. -..+..+|+.+++
T Consensus 215 ~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~-~~---d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 215 SPDSGEFVITVGSDR--KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATV-GA---DATIRVWDVTTSK 285 (615)
T ss_dssp CSTTCCEEEEEETTC--CEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEE-ET---TSEEEEEETTTTE
T ss_pred CCCCCCEEEEEeCCC--eEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEE-cC---CCcEEEEECCCCc
Confidence 987 67777777764 7899999888876677 3 345667788888 77755533 32 2578999998774
No 282
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.18 E-value=9.4e-09 Score=106.95 Aligned_cols=249 Identities=12% Similarity=0.040 Sum_probs=137.5
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECC--CCceec--ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIE--DQIVEA--DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~--~g~~~~--~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..++|||||++|+++...+ ..|.+|+++ +|+... ..........++|+|||+.|+++...
T Consensus 41 ~~~~~spdg~~l~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------ 104 (343)
T 1ri6_A 41 QPMVVSPDKRYLYVGVRPE----FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN------------ 104 (343)
T ss_dssp CCEEECTTSSEEEEEETTT----TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT------------
T ss_pred ceEEECCCCCEEEEeecCC----CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC------------
Confidence 4689999999988775432 267787776 666321 11111134789999999998887531
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC-CCCCccccccc
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA-LPEGLEGFKKR 289 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~-~~~~~~~~~~~ 289 (732)
...|++|++..+. ....+...... .....++|||||++|++.... ...|+++++.+ +..
T Consensus 105 ------~~~i~~~d~~~~~-~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~----~~~v~~~d~~~~~~~-------- 164 (343)
T 1ri6_A 105 ------AGNVSVTRLEDGL-PVGVVDVVEGL-DGCHSANISPDNRTLWVPALK----QDRICLFTVSDDGHL-------- 164 (343)
T ss_dssp ------TTEEEEEEEETTE-EEEEEEEECCC-TTBCCCEECTTSSEEEEEEGG----GTEEEEEEECTTSCE--------
T ss_pred ------CCeEEEEECCCCc-cccccccccCC-CCceEEEECCCCCEEEEecCC----CCEEEEEEecCCCce--------
Confidence 2357777774221 11122111111 123468899999998765422 23588888765 210
Q ss_pred CCCCCcE--Eeee--cccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCC--CCCce---Ee--ccCC--CCCceeEEE
Q 004766 290 DGLLPFV--KLID--GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE--PNDWF---EV--IPEA--ERDVLESAT 356 (732)
Q Consensus 290 ~~~~~~~--~l~~--~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~--~~~~~---~l--~~~~--~~~~l~~~~ 356 (732)
.... .+.. +.......|+|+|+.+++.... ...+..++++. +. +. .+ ++.. .......+.
T Consensus 165 ---~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~---~~~i~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~i~ 237 (343)
T 1ri6_A 165 ---VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL---NSSVDVWELKDPHGN-IECVQTLDMMPENFSDTRWAADIH 237 (343)
T ss_dssp ---EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT---TTEEEEEESSCTTSC-CEEEEEEECSCTTCCSCCCEEEEE
T ss_pred ---eeecccccccCCCCCcceEEECCCCCEEEEEeCC---CCEEEEEEecCCCCc-EEEEeeccccCccccccCCccceE
Confidence 0001 1111 1111223589999988876543 23677777743 33 21 11 1111 112345688
Q ss_pred EecCC-EEEEEEecCCeeEEEEEeCC--CCce--eeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 357 AVNLN-QMIVSYLSDVKYVLQIRDLK--NGSL--LHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 357 ~~~~~-~l~~~~~~~g~~~l~~~d~~--~g~~--~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+++++ .+++....+ ..|.+|+++ +++. +..+... +.+..+.++++++.++++.. ....-.+|.+|..+++
T Consensus 238 ~s~dg~~l~v~~~~~--~~i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~-~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 238 ITPDGRHLYACDRTA--SLITVFSVSEDGSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQ-KSHHISVYEIVGEQGL 312 (343)
T ss_dssp ECTTSSEEEEEETTT--TEEEEEEECTTSCCEEEEEEEECS-SSCCCEEECTTSSEEEEECT-TTCEEEEEEEETTTTE
T ss_pred ECCCCCEEEEEecCC--CEEEEEEEcCCCCceEEeeeecCC-CccceEEECCCCCEEEEecC-CCCeEEEEEEcCCCce
Confidence 88765 565555444 468888876 3332 1222222 23667788999987765432 2233345555776763
No 283
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.18 E-value=4.8e-08 Score=102.83 Aligned_cols=260 Identities=10% Similarity=-0.007 Sum_probs=130.4
Q ss_pred eEEECCCCcEEEEEEecc-CCceEEEEEEECCCCceeccc--c-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 136 KVSVSEDAKYLAYALSYS-GSDWATIKLMRIEDQIVEADA--L-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~-G~e~~~i~v~dl~~g~~~~~~--~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.++|||||++|+++...+ +.....+|.++.++|+..... . .......+++ ||+.|+++..
T Consensus 54 ~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~-------------- 117 (361)
T 3scy_A 54 YLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANY-------------- 117 (361)
T ss_dssp SEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEET--------------
T ss_pred eEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEEC--------------
Confidence 678999999887775432 122234444455556532211 1 1112234555 8988877642
Q ss_pred ccCCcccEEEEEECCCCCCC-C--eEEEecCCC-------CeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSE-D--ILCWKDPEH-------PKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPE 281 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~-~--~~v~~~~~~-------~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 281 (732)
....|.++++.+...- . ..+...... ......++|||||++|++..... ..++++++.....
T Consensus 118 ----~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~----~~v~v~~~~~~~~ 189 (361)
T 3scy_A 118 ----SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT----DQIHKFNINPNAN 189 (361)
T ss_dssp ----TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT----TEEEEEEECTTCC
T ss_pred ----CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC----CEEEEEEEcCCCC
Confidence 2235777777543211 1 111111100 11235689999999987765322 2455555543110
Q ss_pred ----C-cccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceE---eccC-CCCCce
Q 004766 282 ----G-LEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFE---VIPE-AERDVL 352 (732)
Q Consensus 282 ----~-~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~---l~~~-~~~~~l 352 (732)
. +... . ......+..+.......|+|||+.+|+....+ ..|.+++++++. ++. +... ......
T Consensus 190 ~~~~~~l~~~---~-~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~---~~v~v~~~~~g~-~~~~~~~~~~~~~~~~~ 261 (361)
T 3scy_A 190 ADNKEKFLTK---G-TPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG---GTVIAFRYADGM-LDEIQTVAADTVNAQGS 261 (361)
T ss_dssp TTTCCCCEEE---E-EEEEEECCTTCCEEEEEECTTSSEEEEEETTT---CEEEEEEEETTE-EEEEEEEESCSSCCCCE
T ss_pred cccccceeec---c-cccceecCCCCCCeEEEEcCCCCEEEEEcCCC---CeEEEEEecCCc-eEEeEEEecCCCCCCCc
Confidence 0 0000 0 00000111122222346999999888765432 357777776553 221 1111 111234
Q ss_pred eEEEEecCCE-EEEEEecCCeeEEEEEeC--CCCce--eeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 353 ESATAVNLNQ-MIVSYLSDVKYVLQIRDL--KNGSL--LHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 353 ~~~~~~~~~~-l~~~~~~~g~~~l~~~d~--~~g~~--~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
..+.++++++ |++.... +...|.+|++ ++|+. +..+.. ...+..+.++||++.+++... ...--.+|.+|..
T Consensus 262 ~~i~~spdg~~l~v~~~~-~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~-~~~~v~v~~~d~~ 338 (361)
T 3scy_A 262 GDIHLSPDGKYLYASNRL-KADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACR-DTNVIQIFERDQA 338 (361)
T ss_dssp EEEEECTTSSEEEEEECS-SSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEET-TTTEEEEEEECTT
T ss_pred ccEEECCCCCEEEEECCC-CCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEEC-CCCCEEEEEEECC
Confidence 5788888655 5554443 1245666665 45653 122222 234556788999997765543 2333456668887
Q ss_pred CCC
Q 004766 428 TET 430 (732)
Q Consensus 428 ~~~ 430 (732)
+++
T Consensus 339 ~g~ 341 (361)
T 3scy_A 339 TGL 341 (361)
T ss_dssp TCC
T ss_pred CCc
Confidence 874
No 284
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.17 E-value=2.2e-10 Score=117.24 Aligned_cols=117 Identities=12% Similarity=0.065 Sum_probs=77.6
Q ss_pred cCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCC
Q 004766 459 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 538 (732)
Q Consensus 459 ~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 538 (732)
.+| .++.+... |..|.||++||.++... .|.. ....|. .||.|+++|.||.|..... .......
T Consensus 12 ~~~-~~~~~~~~--------g~g~~~vllHG~~~~~~--~w~~-~~~~l~-~~~~vi~~Dl~G~G~s~~~---~~~~~~~ 75 (291)
T 3qyj_A 12 TTE-ARINLVKA--------GHGAPLLLLHGYPQTHV--MWHK-IAPLLA-NNFTVVATDLRGYGDSSRP---ASVPHHI 75 (291)
T ss_dssp CSS-CEEEEEEE--------CCSSEEEEECCTTCCGG--GGTT-THHHHT-TTSEEEEECCTTSTTSCCC---CCCGGGG
T ss_pred cCC-eEEEEEEc--------CCCCeEEEECCCCCCHH--HHHH-HHHHHh-CCCEEEEEcCCCCCCCCCC---CCCcccc
Confidence 367 78876532 34578999999887643 3443 345677 7999999999998754321 0000001
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcC
Q 004766 539 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHV 593 (732)
Q Consensus 539 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~ 593 (732)
..+.+++.+.+..+++. ...+++.++|||+||+++..++.++|++++++|+..
T Consensus 76 ~~~~~~~~~~~~~~~~~--l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (291)
T 3qyj_A 76 NYSKRVMAQDQVEVMSK--LGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLD 128 (291)
T ss_dssp GGSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEES
T ss_pred ccCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEEC
Confidence 12344444433333332 123579999999999999999999999999998764
No 285
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.17 E-value=6.6e-09 Score=111.56 Aligned_cols=236 Identities=19% Similarity=0.114 Sum_probs=145.4
Q ss_pred EEeEEECCCCc-EEEEEEeccCCceEEEEEEEC----CCCce------ec---ccc--------cceeeeeEEEEeCCcE
Q 004766 134 LIKVSVSEDAK-YLAYALSYSGSDWATIKLMRI----EDQIV------EA---DAL--------SWFKFSSIAWTHDSKG 191 (732)
Q Consensus 134 ~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl----~~g~~------~~---~~~--------~~~~~~~~~WspDg~~ 191 (732)
+..++|||||+ +||.... ...|++||+ .+++. .. ... .......++|+|||+.
T Consensus 48 v~~~~~s~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 48 IVSSTWNPLDESILAYGEK-----NSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp CSEEEECSSCTTEEEEEET-----BTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eEEEEECCCCCcEEEEecC-----CceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 45889999999 8886642 247999999 88772 21 100 1113578999999999
Q ss_pred EEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEE
Q 004766 192 FFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKV 271 (732)
Q Consensus 192 l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l 271 (732)
|+....+ ..|++|+... . .+.....+...+..+.|+|||++|+....++ .+
T Consensus 123 l~~~~~d-------------------g~i~i~~~~~---~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i 173 (425)
T 1r5m_A 123 IVTGVEN-------------------GELRLWNKTG---A--LLNVLNFHRAPIVSVKWNKDGTHIISMDVEN-----VT 173 (425)
T ss_dssp EEEEETT-------------------SCEEEEETTS---C--EEEEECCCCSCEEEEEECTTSSEEEEEETTC-----CE
T ss_pred EEEEeCC-------------------CeEEEEeCCC---C--eeeeccCCCccEEEEEECCCCCEEEEEecCC-----eE
Confidence 9887533 2477777322 1 2222222344567899999999988765433 37
Q ss_pred EEEeCCCCCCCcccccccCCCCCcEEeeeccc----------------ceEEEEEecCCeEEEEeCCCCCCceEEEEeCC
Q 004766 272 YYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD----------------AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK 335 (732)
Q Consensus 272 ~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 335 (732)
.++++.++.. ...+..... .....|++++ .++..+. ...|..+|+.
T Consensus 174 ~iwd~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~g~i~~~d~~ 235 (425)
T 1r5m_A 174 ILWNVISGTV-------------MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGP----KGAIFVYQIT 235 (425)
T ss_dssp EEEETTTTEE-------------EEEECCC---------------CCCBSCCEEEETT-EEEEECG----GGCEEEEETT
T ss_pred EEEECCCCcE-------------EEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcC----CCeEEEEEcC
Confidence 8888876421 111111000 1112467764 4444322 4579999998
Q ss_pred CCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecC
Q 004766 336 EPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSF 415 (732)
Q Consensus 336 ~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~ 415 (732)
++.....+..+. ..+..+.+++++.+++....++ .|++||+.+++....+......+..+.+++++ . +++.+.
T Consensus 236 ~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~- 308 (425)
T 1r5m_A 236 EKTPTGKLIGHH--GPISVLEFNDTNKLLLSASDDG--TLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-K-VISCSM- 308 (425)
T ss_dssp CSSCSEEECCCS--SCEEEEEEETTTTEEEEEETTS--CEEEECSSSBSCSEEECCCSSCEEEEEEETTT-E-EEEEET-
T ss_pred CCceeeeeccCC--CceEEEEECCCCCEEEEEcCCC--EEEEEECCCCccceEecCCCccEEEEEECCCC-E-EEEEeC-
Confidence 876444444443 5688899998666677776664 68899998777656665456677788888888 3 333333
Q ss_pred CCCceEEEEECCCCC
Q 004766 416 LIPGIVYQCNLKTET 430 (732)
Q Consensus 416 ~~p~~~y~~d~~~~~ 430 (732)
-..++.||+.+++
T Consensus 309 --d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 309 --DGSVRLWSLKQNT 321 (425)
T ss_dssp --TSEEEEEETTTTE
T ss_pred --CCcEEEEECCCCc
Confidence 3589999988763
No 286
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1e-08 Score=110.13 Aligned_cols=239 Identities=12% Similarity=0.086 Sum_probs=150.3
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+..+.|||||++|+.... + ..|++||. +++.+. ..........++|+||++.|+....+
T Consensus 109 ~~v~~~~~s~~~~~l~~~~~-d----g~i~i~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------ 170 (425)
T 1r5m_A 109 NQVTCLAWSHDGNSIVTGVE-N----GELRLWNK-TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVE------------ 170 (425)
T ss_dssp BCEEEEEECTTSSEEEEEET-T----SCEEEEET-TSCEEEEECCCCSCEEEEEECTTSSEEEEEETT------------
T ss_pred CceEEEEEcCCCCEEEEEeC-C----CeEEEEeC-CCCeeeeccCCCccEEEEEECCCCCEEEEEecC------------
Confidence 35789999999999987642 2 36899994 444332 22222235789999999988877533
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCC-------------eeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHP-------------KYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS 277 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~-------------~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 277 (732)
..|++|++.++.. +..+...... .....+.|+|++..+ .... ...|+++|+.
T Consensus 171 -------~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~g~i~~~d~~ 235 (425)
T 1r5m_A 171 -------NVTILWNVISGTV--MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFV-IPGP-----KGAIFVYQIT 235 (425)
T ss_dssp -------CCEEEEETTTTEE--EEEECCC---------------CCCBSCCEEEETTEEE-EECG-----GGCEEEEETT
T ss_pred -------CeEEEEECCCCcE--EEEeeccccCccceeeccccCCcceeeEEEEcCCCEEE-EEcC-----CCeEEEEEcC
Confidence 2477888865431 1122111110 014567899997743 3322 2348888987
Q ss_pred CCCCCcccccccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEE
Q 004766 278 ALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESAT 356 (732)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~ 356 (732)
++. ....+....... ...|+|+++.|+..+. ...|..+|+.++.....+..+. ..+..+.
T Consensus 236 ~~~-------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~--~~i~~~~ 296 (425)
T 1r5m_A 236 EKT-------------PTGKLIGHHGPISVLEFNDTNKLLLSASD----DGTLRIWHGGNGNSQNCFYGHS--QSIVSAS 296 (425)
T ss_dssp CSS-------------CSEEECCCSSCEEEEEEETTTTEEEEEET----TSCEEEECSSSBSCSEEECCCS--SCEEEEE
T ss_pred CCc-------------eeeeeccCCCceEEEEECCCCCEEEEEcC----CCEEEEEECCCCccceEecCCC--ccEEEEE
Confidence 642 122222211111 2358999887766543 2368888988766444444343 5688899
Q ss_pred EecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 357 AVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 357 ~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+++++ ++++...++ .|++||+.+++.+..+..+...+..+.++++++.++.... -..++.||+.++
T Consensus 297 ~~~~~-~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~~~~~~ 362 (425)
T 1r5m_A 297 WVGDD-KVISCSMDG--SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFM----DGQVNVYDLKKL 362 (425)
T ss_dssp EETTT-EEEEEETTS--EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEET----TSCEEEEECHHH
T ss_pred ECCCC-EEEEEeCCC--cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEEC----CCeEEEEECCCC
Confidence 99866 666666664 7899999888776666655667778889999986654432 257888888654
No 287
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.17 E-value=6.3e-12 Score=137.93 Aligned_cols=221 Identities=18% Similarity=0.146 Sum_probs=130.4
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCC---CccCCCCcChhHHHHHHhcC-cEEEEEcccCCC-CCchhHHhc
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGF---NISVTPSFSVSRTILMRHLG-AVFCIANIRGGG-EYGEEWHKG 532 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~---~~~~~~~~~~~~~~~l~~~G-~~v~~~~~rG~g-~~g~~~~~~ 532 (732)
+.|+ . .+.++.|+. ..++.|+||++|||. ++.....+.. ..+.. +| ++|+.+|||.+. +|+..-...
T Consensus 81 ~edc-l--~l~v~~P~~--~~~~~Pviv~iHGGg~~~g~~~~~~~~~--~~la~-~~~~vvv~~nYRlg~~Gf~~~~~~~ 152 (498)
T 2ogt_A 81 SEDG-L--YLNIWSPAA--DGKKRPVLFWIHGGAFLFGSGSSPWYDG--TAFAK-HGDVVVVTINYRMNVFGFLHLGDSF 152 (498)
T ss_dssp BSCC-C--EEEEEESCS--SSCCEEEEEEECCSTTTSCCTTCGGGCC--HHHHH-HHTCEEEEECCCCHHHHCCCCTTTT
T ss_pred CCCC-c--EEEEEecCC--CCCCCcEEEEEcCCccCCCCCCCCcCCH--HHHHh-CCCEEEEeCCCcCchhhccCchhhc
Confidence 4555 4 455667863 346789999999996 3333333332 34444 55 999999999321 222111000
Q ss_pred --ccccCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhh--CCCeeeEEEEcCCcccc-cccccC
Q 004766 533 --GALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGVMDM-LRYHKF 604 (732)
Q Consensus 533 --~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p~~d~-~~~~~~ 604 (732)
.....+...+.|++++++|+.++. -.||+||.|+|+|+||.+++.++.. .+.+|+++|+.+|..+. ......
T Consensus 153 ~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~ 232 (498)
T 2ogt_A 153 GEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGSLLLRSPET 232 (498)
T ss_dssp CGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTTTTCBCHHH
T ss_pred cccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCccccccCHHH
Confidence 011122346899999999998762 2699999999999999999888875 25689999999997652 111000
Q ss_pred --CCCCccccccCCCCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCC
Q 004766 605 --TIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTS 682 (732)
Q Consensus 605 --~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~ 682 (732)
..........|++. +..+.|++.++...+.... ... +.+.....-|..+-+.++.++.++-+..
T Consensus 233 ~~~~~~~~~~~~gc~~--~~~~~Lr~~~~~~l~~~~~-------~~~-~~~~f~PvvDg~~lp~~p~~~~~~g~~~---- 298 (498)
T 2ogt_A 233 AMAMTERILDKAGIRP--GDRERLLSIPAEELLRAAL-------SLG-PGVMYGPVVDGRVLRRHPIEALRYGAAS---- 298 (498)
T ss_dssp HHHHHHHHHHHHTCCT--TCHHHHHHSCHHHHHHHHH-------TTT-TSCCCCCBCCSSSCCSCHHHHHHTTTTT----
T ss_pred HHHHHHHHHHHhCCCH--HHHHHHHcCCHHHHHHHHh-------hcc-CCCceeeeeCCcccccCHHHHHhcCCCC----
Confidence 00001123346652 2345566655543222100 000 1112223346667777776655443322
Q ss_pred CCCCCCCCCEEEEEeCCCCCCCCC
Q 004766 683 LENSPQTNPIIGRIERKAGHGVGL 706 (732)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~gH~~~~ 706 (732)
++|+.+-...++|+.+..
T Consensus 299 ------~vp~liG~~~~Eg~~f~~ 316 (498)
T 2ogt_A 299 ------GIPILIGVTKDEYNLFTL 316 (498)
T ss_dssp ------TCCEEEEEETTHHHHTTT
T ss_pred ------CCCEEEEEeccchhhhhc
Confidence 789999999999987654
No 288
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.16 E-value=3.3e-10 Score=112.04 Aligned_cols=212 Identities=14% Similarity=0.008 Sum_probs=126.3
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcCc--EEEEEcccCCCCC---chh--HHh-----cccccCCc----cHHHH
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGA--VFCIANIRGGGEY---GEE--WHK-----GGALAKKQ----NCFDD 544 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~--~v~~~~~rG~g~~---g~~--~~~-----~~~~~~~~----~~~~D 544 (732)
.+.||++||..+... .|.. +...|.++|+ .|+.+|+++.|.. |.- ... -+...+.. ...++
T Consensus 6 ~~pvvliHG~~~~~~--~~~~-l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~ 82 (249)
T 3fle_A 6 TTATLFLHGYGGSER--SETF-MVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYW 82 (249)
T ss_dssp CEEEEEECCTTCCGG--GTHH-HHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHH
T ss_pred CCcEEEECCCCCChh--HHHH-HHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHH
Confidence 456888999877543 3443 4566776886 5888888876531 110 000 00011111 13567
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCC-----eeeEEEEcCCcccccccccCCCCCccccccCCCCC
Q 004766 545 FISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD-----LFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEE 619 (732)
Q Consensus 545 ~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-----~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~ 619 (732)
+.+++++|.++- ..+++.++||||||++++.++.++|+ ..+.+|+..+..+-................|.|..
T Consensus 83 l~~~i~~l~~~~--~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~~g~p~~ 160 (249)
T 3fle_A 83 IKEVLSQLKSQF--GIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDKQGKPSR 160 (249)
T ss_dssp HHHHHHHHHHTT--CCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCTTCCBSS
T ss_pred HHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcccCCCcc
Confidence 778888887662 34589999999999999999998874 67888776654443322211111111123355522
Q ss_pred -HHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeC------CCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCE
Q 004766 620 -EEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD------HDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPI 692 (732)
Q Consensus 620 -~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 692 (732)
...++.|.+..+ .+.. ...|+|.++|. .|..||...++.+...++.. ....
T Consensus 161 ~~~~~~~l~~~~~--~~p~----------~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~----------~~~y 218 (249)
T 3fle_A 161 MNAAYRQLLSLYK--IYCG----------KEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGS----------TKSY 218 (249)
T ss_dssp CCHHHHHTGGGHH--HHTT----------TTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTC----------SSEE
T ss_pred cCHHHHHHHHHHh--hCCc----------cCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhC----------CCce
Confidence 234444433211 1111 35699999998 79999998887776666643 4555
Q ss_pred EEEEeCC--CCCCCCCchHHHHHHHHHHHHHH
Q 004766 693 IGRIERK--AGHGVGLPTQKMIDEAADRYGFM 722 (732)
Q Consensus 693 ~~~~~~~--~gH~~~~~~~~~~~~~~~~~~fl 722 (732)
..+++++ +.|...... .+....+..||
T Consensus 219 ~e~~v~g~~a~Hs~l~~n---~~V~~~I~~FL 247 (249)
T 3fle_A 219 QEMKFKGAKAQHSQLHEN---KDVANEIIQFL 247 (249)
T ss_dssp EEEEEESGGGSTGGGGGC---HHHHHHHHHHH
T ss_pred EEEEEeCCCCchhccccC---HHHHHHHHHHh
Confidence 5566655 889865432 24556677777
No 289
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.16 E-value=4.3e-09 Score=123.90 Aligned_cols=226 Identities=11% Similarity=0.013 Sum_probs=149.5
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+..+.|||||++||.... ...|+|||+.+|+.+.... .......++|+|||+.|+....+
T Consensus 57 ~v~~~~~s~~~~~l~~~~~-----dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------------- 118 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSD-----DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD------------- 118 (814)
T ss_dssp CEEEEEEEGGGTEEEEEET-----TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT-------------
T ss_pred cEEEEEEeCCCCEEEEEeC-----CCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC-------------
Confidence 4778999999999998753 2489999999998543221 22235789999999998876532
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec-CCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
..|.+|++.++... ...+.. +...+..+.|+| ||+.|+....+ ..|.++|+.++.
T Consensus 119 ------g~i~vw~~~~~~~~-~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~d-----g~v~vwd~~~~~---------- 174 (814)
T 3mkq_A 119 ------LTVKLWNWENNWAL-EQTFEG--HEHFVMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQST---------- 174 (814)
T ss_dssp ------SEEEEEEGGGTSEE-EEEEEC--CSSCEEEEEEETTEEEEEEEEETT-----SEEEEEETTCSS----------
T ss_pred ------CEEEEEECCCCceE-EEEEcC--CCCcEEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCc----------
Confidence 36888888764221 122322 234567899999 78887765533 348888987632
Q ss_pred CCCCcEEeeec--ccceEEEEEe--cCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEE
Q 004766 291 GLLPFVKLIDG--FDAQYEVIAN--DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVS 366 (732)
Q Consensus 291 ~~~~~~~l~~~--~~~~~~~~s~--dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~ 366 (732)
+...+... .......|+| ++..++..+. ...|..+|+.++.....+..+. ..+..+.+++++.++++
T Consensus 175 ---~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~ 245 (814)
T 3mkq_A 175 ---PNFTLTTGQERGVNYVDYYPLPDKPYMITASD----DLTIKIWDYQTKSCVATLEGHM--SNVSFAVFHPTLPIIIS 245 (814)
T ss_dssp ---CSEEEECCCTTCCCEEEECCSTTCCEEEEECT----TSEEEEEETTTTEEEEEEECCS--SCEEEEEECSSSSEEEE
T ss_pred ---ceeEEecCCCCCEEEEEEEECCCCCEEEEEeC----CCEEEEEECCCCcEEEEEcCCC--CCEEEEEEcCCCCEEEE
Confidence 12222222 2223345788 7776665433 3478889988776344443343 56888999987667777
Q ss_pred EecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEE
Q 004766 367 YLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFIS 411 (732)
Q Consensus 367 ~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~ 411 (732)
...++ .|++||+.+++....+..+...+..+++++++..+++.
T Consensus 246 ~~~dg--~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 288 (814)
T 3mkq_A 246 GSEDG--TLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIA 288 (814)
T ss_dssp EETTS--CEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEE
T ss_pred EeCCC--eEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEE
Confidence 77774 68899998887766676666667778888888754333
No 290
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.15 E-value=7.8e-09 Score=108.25 Aligned_cols=240 Identities=9% Similarity=0.014 Sum_probs=141.0
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...+..+.|||||++|+-.. ...+|++||+.+++.+.... .......++|+|||+.|+....+
T Consensus 76 ~~~V~~~~~~~~~~~l~s~s-----~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d----------- 139 (343)
T 2xzm_R 76 NHFVSDLALSQENCFAISSS-----WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE----------- 139 (343)
T ss_dssp SSCEEEEEECSSTTEEEEEE-----TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT-----------
T ss_pred CCceEEEEECCCCCEEEEEc-----CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC-----------
Confidence 34577899999999887442 22489999999988543221 22235789999999988876533
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEe-cCCCCeeEEEeEEecCC----------cEEEEEEecCCcceEEEEEEeCCC
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWK-DPEHPKYIFSGHVTEDG----------QYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~-~~~~~~~~~~~~~SpDg----------~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
..|.+|++.... ..... ...+...+..+.|+|++ .+++..+.+ ..|.++|...
T Consensus 140 --------~~i~~wd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~ 203 (343)
T 2xzm_R 140 --------REIKLWNILGEC---KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD-----GRLKVWNTNF 203 (343)
T ss_dssp --------SCEEEEESSSCE---EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT-----SEEEEEETTT
T ss_pred --------CEEEEEeccCCc---eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC-----CEEEEEcCCC
Confidence 358888875321 11111 11233456688999987 565544432 3477778432
Q ss_pred CCCCcccccccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEE
Q 004766 279 LPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATA 357 (732)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~ 357 (732)
. ....+....... ...|+|+|+.|+..+. ...|..+|+............. ..+..+.+
T Consensus 204 ~--------------~~~~~~~h~~~v~~~~~s~~g~~l~sgs~----dg~v~iwd~~~~~~~~~~~~~~--~~v~~v~~ 263 (343)
T 2xzm_R 204 Q--------------IRYTFKAHESNVNHLSISPNGKYIATGGK----DKKLLIWDILNLTYPQREFDAG--STINQIAF 263 (343)
T ss_dssp E--------------EEEEEECCSSCEEEEEECTTSSEEEEEET----TCEEEEEESSCCSSCSEEEECS--SCEEEEEE
T ss_pred c--------------eeEEEcCccccceEEEECCCCCEEEEEcC----CCeEEEEECCCCcccceeecCC--CcEEEEEE
Confidence 1 011222211111 2258999988775443 3468888884433122222222 45888999
Q ss_pred ecCCEEEEEEecCCeeEEEEEeCCCCceee--ecc-----------cccceeeEeecccCCcEEEEEEecCCCCceEEEE
Q 004766 358 VNLNQMIVSYLSDVKYVLQIRDLKNGSLLH--QLP-----------IEIGSVNAISARREDSVVFISFTSFLIPGIVYQC 424 (732)
Q Consensus 358 ~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~--~l~-----------~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~ 424 (732)
++++.+++...++ .|.+|++.+++... .+. .....+..++++|+++.|+.... -..+..|
T Consensus 264 sp~~~~la~~~d~---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~----Dg~v~~w 336 (343)
T 2xzm_R 264 NPKLQWVAVGTDQ---GVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFT----DGVIRTF 336 (343)
T ss_dssp CSSSCEEEEEESS---CEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEET----TSEEEEE
T ss_pred CCCCCEEEEECCC---CEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecC----CceEEEE
Confidence 9866666555433 48899987665422 222 11234677889999986654322 2466667
Q ss_pred ECCCC
Q 004766 425 NLKTE 429 (732)
Q Consensus 425 d~~~~ 429 (732)
++.++
T Consensus 337 ~~~~g 341 (343)
T 2xzm_R 337 SFETS 341 (343)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 65443
No 291
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.15 E-value=4.6e-11 Score=132.53 Aligned_cols=133 Identities=18% Similarity=0.165 Sum_probs=94.5
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCC-CcChhHHHHHHhcCcEEEEEccc-CCCCCchhHHhcccc
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP-SFSVSRTILMRHLGAVFCIANIR-GGGEYGEEWHKGGAL 535 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~r-G~g~~g~~~~~~~~~ 535 (732)
+.|. +.+.++.|+....+++.|+||++|||....... .|... .++.++|++|+.+||| |..+|+..... .
T Consensus 95 ~edc---l~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~--~la~~~g~vvv~~nYRlg~~gf~~~~~~---~ 166 (542)
T 2h7c_A 95 SEDC---LYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGL--ALAAHENVVVVTIQYRLGIWGFFSTGDE---H 166 (542)
T ss_dssp ESCC---CEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCH--HHHHHHTCEEEEECCCCHHHHHCCCSST---T
T ss_pred CCCC---cEEEEEECCCCCCCCCCCEEEEECCCcccCCCccccCHH--HHHhcCCEEEEecCCCCccccCCCCCcc---c
Confidence 4455 445677887654457899999999985432222 24432 3455589999999999 43233221111 1
Q ss_pred cCCccHHHHHHHHHHHHHHc---CCCCCCcEEEEecChhHHHHHHHHhh--CCCeeeEEEEcCCcccc
Q 004766 536 AKKQNCFDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGVMDM 598 (732)
Q Consensus 536 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p~~d~ 598 (732)
..+...+.|++++++|+.++ -..||+||.|+|+|+||.+++.++.. .+.+|+++|+.+|....
T Consensus 167 ~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~~ 234 (542)
T 2h7c_A 167 SRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALT 234 (542)
T ss_dssp CCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTTC
T ss_pred CccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCccC
Confidence 22334689999999999876 24699999999999999999998876 36799999999997654
No 292
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.15 E-value=1.3e-08 Score=106.99 Aligned_cols=224 Identities=9% Similarity=-0.024 Sum_probs=139.5
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce--e-----cccccceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV--E-----ADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~--~-----~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
+..+.|||||++||... ....+++|++..+.. . ...........++|+||++.|+..+.+
T Consensus 109 v~~~~~sp~g~~lasg~-----~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D-------- 175 (354)
T 2pbi_B 109 VMACAYAPSGCAIACGG-----LDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGD-------- 175 (354)
T ss_dssp CCEEEECTTSSEEEEES-----TTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETT--------
T ss_pred EEEEEECCCCCEEEEee-----CCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCC--------
Confidence 45789999999988552 224788898865421 0 001111124678999999988876533
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec--CCcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE--DGQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp--Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
..|.+|++.++.. +..+... ...+..+.++| +|++|+..+.++ .+.++|+.++.
T Consensus 176 -----------~~v~lwd~~~~~~--~~~~~~h--~~~v~~~~~~~~~~g~~l~sgs~Dg-----~v~~wd~~~~~---- 231 (354)
T 2pbi_B 176 -----------GTCALWDVESGQL--LQSFHGH--GADVLCLDLAPSETGNTFVSGGCDK-----KAMVWDMRSGQ---- 231 (354)
T ss_dssp -----------SEEEEEETTTCCE--EEEEECC--SSCEEEEEECCCSSCCEEEEEETTS-----CEEEEETTTCC----
T ss_pred -----------CcEEEEeCCCCeE--EEEEcCC--CCCeEEEEEEeCCCCCEEEEEeCCC-----eEEEEECCCCc----
Confidence 3689999987642 2233332 22344566665 678877665433 38888987742
Q ss_pred cccccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEE
Q 004766 285 GFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQM 363 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l 363 (732)
+...+....... ...|+|+|+.|+..+.. ..|..+|+.+......+..+.....+..+.+++++.+
T Consensus 232 ---------~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D----~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 298 (354)
T 2pbi_B 232 ---------CVQAFETHESDVNSVRYYPSGDAFASGSDD----ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRL 298 (354)
T ss_dssp ---------EEEEECCCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred ---------EEEEecCCCCCeEEEEEeCCCCEEEEEeCC----CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCE
Confidence 122222211111 22488998877655432 3577888877642222222221234667888887777
Q ss_pred EEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEE
Q 004766 364 IVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVF 409 (732)
Q Consensus 364 ~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~ 409 (732)
++....++ .|++||+.+|+.+..+..+.+.|..+.++|++..++
T Consensus 299 l~~g~~d~--~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 299 LFAGYNDY--TINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC 342 (354)
T ss_dssp EEEEETTS--CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred EEEEECCC--cEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEE
Confidence 77777774 788999987877666665677788899999998554
No 293
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.15 E-value=4.2e-08 Score=105.80 Aligned_cols=248 Identities=12% Similarity=-0.011 Sum_probs=150.4
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
..+..++|||||++||.... ..+|+|||+++++.+....... ..-.++++|++.|+....
T Consensus 148 ~~V~sv~fspdg~~lasgs~-----Dg~v~iWd~~~~~~~~~~~~h~-~~v~~~s~~~~~l~sgs~-------------- 207 (420)
T 4gga_A 148 EYISSVAWIKEGNYLAVGTS-----SAEVQLWDVQQQKRLRNMTSHS-ARVGSLSWNSYILSSGSR-------------- 207 (420)
T ss_dssp CCEEEEEECTTSSEEEEEET-----TSCEEEEETTTTEEEEEECCCS-SCEEEEEEETTEEEEEET--------------
T ss_pred CcEEEEEECCCCCEEEEEEC-----CCeEEEEEcCCCcEEEEEeCCC-CceEEEeeCCCEEEEEeC--------------
Confidence 34789999999999986542 2479999999998654322111 122344557777765542
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
...++.++..+.... +..+.. +........++|+|++++....++. +.+++..++...
T Consensus 208 -----d~~i~~~d~~~~~~~-~~~~~~--h~~~~~~~~~~~~g~~l~s~~~D~~-----v~i~~~~~~~~~--------- 265 (420)
T 4gga_A 208 -----SGHIHHHDVRVAEHH-VATLSG--HSQEVCGLRWAPDGRHLASGGNDNL-----VNVWPSAPGEGG--------- 265 (420)
T ss_dssp -----TSEEEEEETTSSSCE-EEEEEC--CSSCEEEEEECTTSSEEEEEETTSC-----EEEEESSCCSSC---------
T ss_pred -----CCceeEeeeccccee-eEEecc--cccceeeeeecCCCCeeeeeecccc-----ceEEeecccccc---------
Confidence 336788887654322 222322 2334568899999999987665433 677787764311
Q ss_pred CCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecC
Q 004766 292 LLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSD 370 (732)
Q Consensus 292 ~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~ 370 (732)
............. ....|+|++..++....- ..+..|..+|+.++.....+..+ ..+..+.+.+++..++.....
T Consensus 266 ~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~g-s~D~~I~iwd~~t~~~~~~~~~~---~~v~~~~~~~~~~~lv~~sg~ 341 (420)
T 4gga_A 266 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGACLSAVDAH---SQVCSILWSPHYKELISGHGF 341 (420)
T ss_dssp SCCSEEECCCSSCEEEEEECTTCTTEEEEEEC-TTTCEEEEEETTTTEEEEEEECS---SCEEEEEEETTTTEEEEEECT
T ss_pred ceeeeeecccCCceeeeeeCCCcccEEEEEee-cCCCEEEEEeCCccccceeeccc---cceeeeeecCCCCeEEEEEec
Confidence 1112222221111 123588877766654332 22457888999887633333322 345667777654433333322
Q ss_pred CeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 371 VKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 371 g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
....|++||..+++.+..+..+.+.|..+.++||+..|+ +.+.. .++..||+...
T Consensus 342 ~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~-S~s~D---~tvriWdv~~~ 396 (420)
T 4gga_A 342 AQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA-SAAAD---ETLRLWRCFEL 396 (420)
T ss_dssp TTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE-EEETT---TEEEEECCSCS
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEecC---CeEEEEECCCC
Confidence 225799999998888778876777888999999998654 44432 46778887543
No 294
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.14 E-value=5.9e-08 Score=100.41 Aligned_cols=239 Identities=10% Similarity=0.029 Sum_probs=145.4
Q ss_pred CCEEEEeEEECCCC-cEEEEEEeccCCceEEEEEEECCCCc-----eecc-cccceeeeeEEEEeCCcEEEEEEecCCCC
Q 004766 130 GTAALIKVSVSEDA-KYLAYALSYSGSDWATIKLMRIEDQI-----VEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKE 202 (732)
Q Consensus 130 ~~~~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~~g~-----~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~ 202 (732)
+...+..++|||++ ++|+ +.+.+ .+|++||+.+.. .+.. .........++|+|||+.|+....+
T Consensus 16 H~~~V~~l~~~~~~~~~l~-s~s~D----~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D---- 86 (319)
T 3frx_A 16 HNGWVTSLATSAGQPNLLL-SASRD----KTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD---- 86 (319)
T ss_dssp CSSCEEEEEECSSCTTEEE-EEETT----SEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT----
T ss_pred ccceEEEEEccCCCccEEE-EecCC----ccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC----
Confidence 34456788999977 5554 43322 489999986532 1111 1111124678999999988876543
Q ss_pred CCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCC
Q 004766 203 GKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEG 282 (732)
Q Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 282 (732)
..|.+|++.++.. ...+.. +...+..+.|+|++++|+..+.++. +.++|+.+..
T Consensus 87 ---------------~~v~~wd~~~~~~--~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D~~-----i~vwd~~~~~-- 140 (319)
T 3frx_A 87 ---------------KTLRLWDVATGET--YQRFVG--HKSDVMSVDIDKKASMIISGSRDKT-----IKVWTIKGQC-- 140 (319)
T ss_dssp ---------------SEEEEEETTTTEE--EEEEEC--CSSCEEEEEECTTSCEEEEEETTSC-----EEEEETTSCE--
T ss_pred ---------------CEEEEEECCCCCe--eEEEcc--CCCcEEEEEEcCCCCEEEEEeCCCe-----EEEEECCCCe--
Confidence 3689999987632 122322 2345678999999999876654433 6677876521
Q ss_pred cccccccCCCCCcEEeeecccceE-EEEEec------CCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEE
Q 004766 283 LEGFKKRDGLLPFVKLIDGFDAQY-EVIAND------DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESA 355 (732)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~d------g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~ 355 (732)
...+........ ..+.|. +..++..+. ...|..+|+.+......+..+. ..+..+
T Consensus 141 ------------~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~----d~~i~~wd~~~~~~~~~~~~h~--~~v~~~ 202 (319)
T 3frx_A 141 ------------LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGN----DKMVKAWNLNQFQIEADFIGHN--SNINTL 202 (319)
T ss_dssp ------------EEEECCCSSCEEEEEECCC------CCEEEEEET----TSCEEEEETTTTEEEEEECCCC--SCEEEE
T ss_pred ------------EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeC----CCEEEEEECCcchhheeecCCC--CcEEEE
Confidence 222222111111 124443 333443322 3458888987765333444444 568889
Q ss_pred EEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 356 TAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 356 ~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.+++++.++++...++ .|++||+.+++.+..+.. ...+..+.++|++..++.... ..+..+++..+
T Consensus 203 ~~sp~g~~l~s~~~dg--~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~~-----~~i~v~~~~~~ 268 (319)
T 3frx_A 203 TASPDGTLIASAGKDG--EIMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWLAAATA-----TGIKVFSLDPQ 268 (319)
T ss_dssp EECTTSSEEEEEETTC--EEEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEEEEEET-----TEEEEEEETTE
T ss_pred EEcCCCCEEEEEeCCC--eEEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEEEEEcC-----CCcEEEEeCcC
Confidence 9998777888888774 799999987776555553 345778889999886654332 24666666554
No 295
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.14 E-value=7.7e-09 Score=111.26 Aligned_cols=242 Identities=11% Similarity=0.080 Sum_probs=142.7
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...+..+.|||||++|+.... ..+|++||+.+++.+... ........++|+||++.|+....+.
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~-----d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~---------- 203 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQ-----DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDG---------- 203 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEET-----TSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTS----------
T ss_pred cCccEEEEECCCCCEEEEEeC-----CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCC----------
Confidence 345788999999998886532 248999999988754321 1222357899999999988765432
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCC-C---------------------CeeEEEeEEecCCcEEEEEEecCCcc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPE-H---------------------PKYIFSGHVTEDGQYLVMCIEENCDP 267 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~-~---------------------~~~~~~~~~SpDg~~l~~~~~~~~~~ 267 (732)
.|.+|++.++.. +..+.... . ......+.|||||++|+....++
T Consensus 204 ---------~v~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--- 269 (420)
T 3vl1_A 204 ---------TIRLWECGTGTT--IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG--- 269 (420)
T ss_dssp ---------CEEEEETTTTEE--EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS---
T ss_pred ---------cEEEeECCCCce--eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC---
Confidence 477788765431 12222110 0 01122456789999997765433
Q ss_pred eEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCC-ceEec
Q 004766 268 VNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND-WFEVI 344 (732)
Q Consensus 268 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~l~ 344 (732)
.|.++|+.++. ....+........ ..|+|+++.+++.... ...|..+|+.++.. ...+.
T Consensus 270 --~i~i~d~~~~~-------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~---dg~i~vwd~~~~~~~~~~~~ 331 (420)
T 3vl1_A 270 --VITVHNVFSKE-------------QTIQLPSKFTCSCNSLTVDGNNANYIYAGYE---NGMLAQWDLRSPECPVGEFL 331 (420)
T ss_dssp --CEEEEETTTCC-------------EEEEECCTTSSCEEEEEECSSCTTEEEEEET---TSEEEEEETTCTTSCSEEEE
T ss_pred --eEEEEECCCCc-------------eeEEcccccCCCceeEEEeCCCCCEEEEEeC---CCeEEEEEcCCCcCchhhhh
Confidence 38888987642 1222222222222 2589998834444333 34789999987653 34444
Q ss_pred cCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceee---------ecccccceeeEeecccCCc---EEEEEE
Q 004766 345 PEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLH---------QLPIEIGSVNAISARREDS---VVFISF 412 (732)
Q Consensus 345 ~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~---------~l~~~~g~v~~~~~s~d~~---~l~~~~ 412 (732)
.+. ...+..+.+.+ +.++++...+ ..|.+|++.+++... .+....+.+..+.+++++. .++..-
T Consensus 332 ~~~-~~~v~~~~~~~-~~~l~s~~~d--~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g 407 (420)
T 3vl1_A 332 INE-GTPINNVYFAA-GALFVSSGFD--TSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVG 407 (420)
T ss_dssp EST-TSCEEEEEEET-TEEEEEETTT--EEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEE
T ss_pred ccC-CCCceEEEeCC-CCEEEEecCC--ccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEc
Confidence 433 35677776655 7778887777 478888876532211 1111234566677777776 555443
Q ss_pred ecCCCCceEEEEECC
Q 004766 413 TSFLIPGIVYQCNLK 427 (732)
Q Consensus 413 ss~~~p~~~y~~d~~ 427 (732)
+. ..+..|+++
T Consensus 408 ~~----g~~~~~~~~ 418 (420)
T 3vl1_A 408 KN----NFCALYNLS 418 (420)
T ss_dssp TT----TEEEEEESC
T ss_pred CC----ceEEEEecc
Confidence 22 345556553
No 296
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.14 E-value=4.9e-08 Score=101.29 Aligned_cols=250 Identities=12% Similarity=0.033 Sum_probs=145.6
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc----eecc-cccceeeeeEEEEe--CCcEEEEEEecCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI----VEAD-ALSWFKFSSIAWTH--DSKGFFYSRYPAPKE 202 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~----~~~~-~~~~~~~~~~~Wsp--Dg~~l~y~~~~~~~~ 202 (732)
+.-.+..++|||||++||.... ...|++||+.++. .+.. .........++|+| |++.|+....+
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d---- 80 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCSS-----DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD---- 80 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEET-----TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT----
T ss_pred cccceeEEEEcCCCCEEEEeeC-----CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC----
Confidence 3445789999999999886632 2489999998764 2111 11122357899999 68888876543
Q ss_pred CCCCCCCCcccCCcccEEEEEECCCCCCCC-----eEEEecCCCCeeEEEeEEecC--CcEEEEEEecCCcceEEEEEEe
Q 004766 203 GKDMDAGTETDSNLYHEFYYHFLGTKQSED-----ILCWKDPEHPKYIFSGHVTED--GQYLVMCIEENCDPVNKVYYCD 275 (732)
Q Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-----~~v~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~~l~~~d 275 (732)
..|.+|++.++.... ..+.....+...+..+.|+|+ +++|+....+ ..|.++|
T Consensus 81 ---------------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd 140 (351)
T 3f3f_A 81 ---------------KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND-----GILRLYD 140 (351)
T ss_dssp ---------------SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEE
T ss_pred ---------------CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC-----CcEEEec
Confidence 257888887653211 223322333445678999999 9998776543 3488889
Q ss_pred CCCCCCCcccccccCCCCCcEE---ee-------eccc-ceEEEEEec---CCeEEEEeCCCCCCceEEEEeCCCCCC--
Q 004766 276 LSALPEGLEGFKKRDGLLPFVK---LI-------DGFD-AQYEVIAND---DTVFTFLTNKDAPKYKIIRVDLKEPND-- 339 (732)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~---l~-------~~~~-~~~~~~s~d---g~~l~~~s~~~~~~~~l~~~d~~~~~~-- 339 (732)
+.++... ..+.. .. .... .....|+|+ ++.++..+.. ..+...+...+..
T Consensus 141 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~ 206 (351)
T 3f3f_A 141 ALEPSDL----------RSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE----QAIIYQRGKDGKLHV 206 (351)
T ss_dssp CSSTTCT----------TCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT----EEEEEEECTTSCEEE
T ss_pred CCChHHh----------ccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCC----CcEEEEccCCCceee
Confidence 8764311 00100 00 0001 112247776 6665554432 2344444444431
Q ss_pred ceEeccCCCCCceeEEEEecCC----EEEEEEecCCeeEEEEEeCCCC--------------------------------
Q 004766 340 WFEVIPEAERDVLESATAVNLN----QMIVSYLSDVKYVLQIRDLKNG-------------------------------- 383 (732)
Q Consensus 340 ~~~l~~~~~~~~l~~~~~~~~~----~l~~~~~~~g~~~l~~~d~~~g-------------------------------- 383 (732)
...+..+ ...+..+.+++++ .++++...++ .|++||+.++
T Consensus 207 ~~~~~~h--~~~i~~~~~~p~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (351)
T 3f3f_A 207 AAKLPGH--KSLIRSISWAPSIGRWYQLIATGCKDG--RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDS 282 (351)
T ss_dssp EEECCCC--CSCEEEEEECCCSSCSSEEEEEEETTS--CEEEEEEEECC-------------------------------
T ss_pred eeecCCC--CcceeEEEECCCCCCcceEEEEEcCCC--eEEEEeCCCCcCccccCCcccceeccCCCccccccccccccc
Confidence 1222222 3568889999865 7888888885 5777787643
Q ss_pred --------------ceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 384 --------------SLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 384 --------------~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+.+..+..+.+.|..+.++++++.++ +.+. -..+..|++.+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~---dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 283 NTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS-SAGD---DGKVRLWKATYSN 339 (351)
T ss_dssp --------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE-EEET---TSCEEEEEECTTS
T ss_pred ccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE-EecC---CCcEEEEecCcCc
Confidence 11222222345677888888887554 3332 2467778877664
No 297
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.13 E-value=2.1e-08 Score=103.79 Aligned_cols=237 Identities=10% Similarity=0.038 Sum_probs=142.3
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...+..+.|||||++|+-.. ...+|++||+.+|+.+.... .......++|+|+++.|+....+.
T Consensus 65 ~~~v~~~~~s~dg~~l~s~s-----~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~---------- 129 (319)
T 3frx_A 65 SHIVQDCTLTADGAYALSAS-----WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDK---------- 129 (319)
T ss_dssp SSCEEEEEECTTSSEEEEEE-----TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTS----------
T ss_pred cccEEEEEECCCCCEEEEEe-----CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCC----------
Confidence 34567889999999988553 22589999999998653221 122347899999999888765433
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCC------cEEEEEEecCCcceEEEEEEeCCCCCCCc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDG------QYLVMCIEENCDPVNKVYYCDLSALPEGL 283 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg------~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 283 (732)
.|.+|++... .+.....+......+.++|++ ..|+..+.+ ..+.++|+.+..
T Consensus 130 ---------~i~vwd~~~~-----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~--- 187 (319)
T 3frx_A 130 ---------TIKVWTIKGQ-----CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQ--- 187 (319)
T ss_dssp ---------CEEEEETTSC-----EEEEECCCSSCEEEEEECCC------CCEEEEEETT-----SCEEEEETTTTE---
T ss_pred ---------eEEEEECCCC-----eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcch---
Confidence 5788887532 222222233456678888854 355544332 237788887632
Q ss_pred ccccccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCE
Q 004766 284 EGFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ 362 (732)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 362 (732)
....+....... ...|+|+|+.|+..+. ...|..+|+.++.....+. .. ..+..+.+++++.
T Consensus 188 ----------~~~~~~~h~~~v~~~~~sp~g~~l~s~~~----dg~i~iwd~~~~~~~~~~~-~~--~~v~~~~~sp~~~ 250 (319)
T 3frx_A 188 ----------IEADFIGHNSNINTLTASPDGTLIASAGK----DGEIMLWNLAAKKAMYTLS-AQ--DEVFSLAFSPNRY 250 (319)
T ss_dssp ----------EEEEECCCCSCEEEEEECTTSSEEEEEET----TCEEEEEETTTTEEEEEEE-CC--SCEEEEEECSSSS
T ss_pred ----------hheeecCCCCcEEEEEEcCCCCEEEEEeC----CCeEEEEECCCCcEEEEec-CC--CcEEEEEEcCCCC
Confidence 111222211111 2258999987775443 3468889998776333332 22 4578899998766
Q ss_pred EEEEEecCCeeEEEEEeCCCCceeeecccc--------cceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 363 MIVSYLSDVKYVLQIRDLKNGSLLHQLPIE--------IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 363 l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~--------~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+++....+ .+.+|+++++.....+... ...+..+.++|||+.|+.. +. -..+..||+.+
T Consensus 251 ~la~~~~~---~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg-~~---Dg~i~vWd~~t 317 (319)
T 3frx_A 251 WLAAATAT---GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAG-YT---DNVIRVWQVMT 317 (319)
T ss_dssp EEEEEETT---EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEE-ET---TSCEEEEEEEE
T ss_pred EEEEEcCC---CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEe-ec---CceEEEEEEee
Confidence 66666554 3777787654433333211 2345578889999876533 22 24566776544
No 298
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.12 E-value=4.5e-09 Score=112.14 Aligned_cols=248 Identities=12% Similarity=0.036 Sum_probs=149.5
Q ss_pred EEEeEEECCC----C---cEEEEEEeccCCceEEEEEEECCCCce-----ec-cccc-----ceeeeeEEEE----eCCc
Q 004766 133 ALIKVSVSED----A---KYLAYALSYSGSDWATIKLMRIEDQIV-----EA-DALS-----WFKFSSIAWT----HDSK 190 (732)
Q Consensus 133 ~~~~~~~SPD----G---~~la~~~~~~G~e~~~i~v~dl~~g~~-----~~-~~~~-----~~~~~~~~Ws----pDg~ 190 (732)
.+..+.|+|+ | ++|+.... + ..|++||+.+++. +. .... ......++|+ ||++
T Consensus 64 ~v~~~~~~~~~~~~g~~~~~l~s~~~-d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 138 (397)
T 1sq9_A 64 GLHHVDVLQAIERDAFELCLVATTSF-S----GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS 138 (397)
T ss_dssp CEEEEEEEEEEETTTEEEEEEEEEET-T----SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----C
T ss_pred cEEEEEEecccccCCccccEEEEEcC-C----CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCc
Confidence 4678899999 9 88876642 2 3699999988773 32 1111 1345789999 9999
Q ss_pred E-EEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCC------CCCCC---eEEEec-----CCCCeeEEEeEEecCCc
Q 004766 191 G-FFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT------KQSED---ILCWKD-----PEHPKYIFSGHVTEDGQ 255 (732)
Q Consensus 191 ~-l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt------~~~~~---~~v~~~-----~~~~~~~~~~~~SpDg~ 255 (732)
. |+....+ ..|++|++.+ +.... ...+.. ..+...+..+.|+|+|
T Consensus 139 ~~l~~~~~d-------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 198 (397)
T 1sq9_A 139 HRLVATDVK-------------------GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG- 198 (397)
T ss_dssp EEEEEEETT-------------------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-
T ss_pred eEEEEEeCC-------------------CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-
Confidence 8 7766432 2477777766 32221 002211 1122344678999999
Q ss_pred EEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee---c---ccc-eEEEEEecCCeEEEEeCCCCCCce
Q 004766 256 YLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID---G---FDA-QYEVIANDDTVFTFLTNKDAPKYK 328 (732)
Q Consensus 256 ~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~---~---~~~-~~~~~s~dg~~l~~~s~~~~~~~~ 328 (732)
.++.... ...+.++|+.++. +...+.. . ... ....|+|+++.|+..+.. +....
T Consensus 199 ~l~~~~~-----dg~i~i~d~~~~~-------------~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d-~~~g~ 259 (397)
T 1sq9_A 199 LIATGFN-----NGTVQISELSTLR-------------PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS-NSFGC 259 (397)
T ss_dssp EEEEECT-----TSEEEEEETTTTE-------------EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEE-TTEEE
T ss_pred eEEEEeC-----CCcEEEEECCCCc-------------eeEEEeccccccccCCccceEEECCCCCEEEEEecC-CCCce
Confidence 5554432 2458888987632 1222222 1 111 122588998877765432 11257
Q ss_pred EEEEeCCCCCCceEeccCC-----------CCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecc------c
Q 004766 329 IIRVDLKEPNDWFEVIPEA-----------ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP------I 391 (732)
Q Consensus 329 l~~~d~~~~~~~~~l~~~~-----------~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~------~ 391 (732)
|..+|+.++.....+.... ....+..+.+++++.++++...++ .|++||+.+++.+..+. .
T Consensus 260 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~ 337 (397)
T 1sq9_A 260 ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG--KLRFWDVKTKERITTLNMHCDDIE 337 (397)
T ss_dssp EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS--EEEEEETTTTEEEEEEECCGGGCS
T ss_pred EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC--eEEEEEcCCCceeEEEecccCccc
Confidence 9999998876334443300 135688899998667777777774 79999998887766666 3
Q ss_pred c---------------cceeeEeecccCCc---------EEEEEEecCCCCceEEEEECCCC
Q 004766 392 E---------------IGSVNAISARREDS---------VVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 392 ~---------------~g~v~~~~~s~d~~---------~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
. ...+..+.+++++. .++++.+. -..+..|++.+|
T Consensus 338 ~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~---dg~i~iw~~~~g 396 (397)
T 1sq9_A 338 IEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCL---DRSIRWFREAGG 396 (397)
T ss_dssp SGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEET---TTEEEEEEEEC-
T ss_pred chhhhhccccccccccCCceeEEEeccccccccccccccceEEEecC---CCcEEEEEcCCC
Confidence 3 55677888888873 34444433 256777777665
No 299
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.12 E-value=8.3e-09 Score=109.78 Aligned_cols=264 Identities=8% Similarity=-0.010 Sum_probs=153.8
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCC------
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGK------ 204 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~------ 204 (732)
..+..+.|||||++|+-.. ...+|+|||+.+++.+... ........++|+|||+.|+....+..-...
T Consensus 67 ~~V~~~~~sp~~~~l~s~s-----~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSAS-----QDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp SCEEEEEECTTSSCEEEEE-----TTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCS
T ss_pred cEEEEEEEcCCCCEEEEEe-----CCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCc
Confidence 4467899999999987553 2248999999998754321 111124678999999998876543211000
Q ss_pred ----------------------CCCC--C-CcccCCcccEEEEEECCCCCCCCeEEEec---CCCCeeEEEeEEec-CCc
Q 004766 205 ----------------------DMDA--G-TETDSNLYHEFYYHFLGTKQSEDILCWKD---PEHPKYIFSGHVTE-DGQ 255 (732)
Q Consensus 205 ----------------------~~~~--~-~~~~~~~~~~v~~~~lgt~~~~~~~v~~~---~~~~~~~~~~~~Sp-Dg~ 255 (732)
.+.. + ..........|.+|++.++.. +..+.. ..+...+..+.+++ ++.
T Consensus 142 ~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~ 219 (380)
T 3iz6_a 142 DRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR--ISIFGSEFPSGHTADVLSLSINSLNAN 219 (380)
T ss_dssp SCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE--EEEECCCSSSSCCSCEEEEEECSSSCC
T ss_pred cccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE--EEEeecccCCCCccCeEEEEeecCCCC
Confidence 0000 0 000112345688888876542 222311 11223456778876 777
Q ss_pred EEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeC
Q 004766 256 YLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDL 334 (732)
Q Consensus 256 ~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~ 334 (732)
.++..+.++ .+.++|+.... .....+...... ....|+|+|+.|+..+. ...|..+|+
T Consensus 220 ~l~sgs~D~-----~v~~wd~~~~~------------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~----D~~i~lwd~ 278 (380)
T 3iz6_a 220 MFISGSCDT-----TVRLWDLRITS------------RAVRTYHGHEGDINSVKFFPDGQRFGTGSD----DGTCRLFDM 278 (380)
T ss_dssp EEEEEETTS-----CEEEEETTTTC------------CCCEEECCCSSCCCEEEECTTSSEEEEECS----SSCEEEEET
T ss_pred EEEEEECCC-----eEEEEECCCCC------------cceEEECCcCCCeEEEEEecCCCeEEEEcC----CCeEEEEEC
Confidence 776554433 37788886421 112233222221 22358999987765433 346888898
Q ss_pred CCCCCceEeccCCC-----CCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecc----cccceeeEeecccCC
Q 004766 335 KEPNDWFEVIPEAE-----RDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP----IEIGSVNAISARRED 405 (732)
Q Consensus 335 ~~~~~~~~l~~~~~-----~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~----~~~g~v~~~~~s~d~ 405 (732)
.++.....+..+.. ...+..+.+++++.+++....++ .|++||..+++....+. .+.+.|..+.+++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg--~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg 356 (380)
T 3iz6_a 279 RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG--DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDG 356 (380)
T ss_dssp TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS--CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSS
T ss_pred CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC--CEEEEECCCCceEEEEecccCCCCCceEEEEECCCC
Confidence 87753333322211 12367788888777777777774 78999988777644442 235667888999999
Q ss_pred cEEEEEEecCCCCceEEEEECCCC
Q 004766 406 SVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 406 ~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
..|+ +.+. -..+..|++.++
T Consensus 357 ~~l~-sgs~---D~~i~iW~~~~~ 376 (380)
T 3iz6_a 357 SALC-TGSW---DKNLKIWAFSGH 376 (380)
T ss_dssp SEEE-EECT---TSCEEEEECCSS
T ss_pred CEEE-EeeC---CCCEEEEecCCC
Confidence 8554 3332 246777777654
No 300
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.11 E-value=1.6e-08 Score=105.94 Aligned_cols=251 Identities=11% Similarity=0.012 Sum_probs=142.2
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce--ec-ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV--EA-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~--~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
+...+..++|||||++||.... ..++++||+.++.. +. .......+..++|+|||+.|+....+.
T Consensus 60 h~~~v~~~~~sp~g~~l~s~s~-----D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~------- 127 (345)
T 3fm0_A 60 HQRTVRKVAWSPCGNYLASASF-----DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK------- 127 (345)
T ss_dssp CSSCEEEEEECTTSSEEEEEET-----TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-------
T ss_pred cCCcEEEEEECCCCCEEEEEEC-----CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC-------
Confidence 3445788999999999986642 24688999887652 11 111122357899999999888775433
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
.|++|++.++... .++.....+...+..+.|+|||++|+..+.++. +.+++..++.
T Consensus 128 ------------~v~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~-----i~~w~~~~~~------ 183 (345)
T 3fm0_A 128 ------------SVWVWEVDEEDEY-ECVSVLNSHTQDVKHVVWHPSQELLASASYDDT-----VKLYREEEDD------ 183 (345)
T ss_dssp ------------CEEEEEECTTSCE-EEEEEECCCCSCEEEEEECSSSSCEEEEETTSC-----EEEEEEETTE------
T ss_pred ------------eEEEEECCCCCCe-EEEEEecCcCCCeEEEEECCCCCEEEEEeCCCc-----EEEEEecCCC------
Confidence 5888888765321 122222223345678999999999887664433 5556655421
Q ss_pred cccCCCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCC----------Cce---EeccCCCCCce
Q 004766 287 KKRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN----------DWF---EVIPEAERDVL 352 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~----------~~~---~l~~~~~~~~l 352 (732)
......+........ ..|+|+|+.|+..+.++ ..+||.....+.. .+. .+.. .....+
T Consensus 184 -----~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~--~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v 255 (345)
T 3fm0_A 184 -----WVCCATLEGHESTVWSLAFDPSGQRLASCSDDR--TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSG-FHSRTI 255 (345)
T ss_dssp -----EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--CEEEEEEECTTCTTCCCCC---CEEEEEEEECS-SCSSCE
T ss_pred -----EEEEEEecCCCCceEEEEECCCCCEEEEEeCCC--eEEEeccccCCCCccceeeccCCccceeEEecC-CCCCcE
Confidence 000112221111112 25899998877655432 3344443222111 011 1111 123567
Q ss_pred eEEEEecCCEEEEEEecCCeeEEEEEeCCCCcee----ee-----cccccceeeEeecccCCcEEEEEEecCCCCceEEE
Q 004766 353 ESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLL----HQ-----LPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQ 423 (732)
Q Consensus 353 ~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~----~~-----l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~ 423 (732)
..+.+++++..+++...++ .|.+|+.+.+... .. ...+...|..++++|++..++++.+.. ..+..
T Consensus 256 ~~v~~~~~~~~l~s~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~D---g~v~~ 330 (345)
T 3fm0_A 256 YDIAWCQLTGALATACGDD--AIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDD---GEVAF 330 (345)
T ss_dssp EEEEECTTTCCEEEEETTS--CEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETT---SCEEE
T ss_pred EEEEEecCCCEEEEEeCCC--eEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCC---CcEEE
Confidence 7888888666677777775 4666766533210 01 112345678889999886555555542 46777
Q ss_pred EECCCC
Q 004766 424 CNLKTE 429 (732)
Q Consensus 424 ~d~~~~ 429 (732)
+++.++
T Consensus 331 W~~~~~ 336 (345)
T 3fm0_A 331 WKYQRP 336 (345)
T ss_dssp EEECC-
T ss_pred EEecCC
Confidence 777665
No 301
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.11 E-value=2.7e-08 Score=104.94 Aligned_cols=245 Identities=13% Similarity=-0.006 Sum_probs=147.1
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCC--ceecc-cccceeeeeEEEEeC--CcEEEEEEecCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQ--IVEAD-ALSWFKFSSIAWTHD--SKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g--~~~~~-~~~~~~~~~~~WspD--g~~l~y~~~~~~~~~~~ 205 (732)
...+..++|||||++||.... + ..|+|||+.++ +.+.. .........++|+|+ ++.|+....+
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~-d----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d------- 78 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATCSS-D----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------- 78 (379)
T ss_dssp CCCEEEEEECSSSSEEEEEET-T----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-------
T ss_pred cccEEEEEEcCCCCEEEEEEC-C----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-------
Confidence 345778999999999986642 2 36899999743 33221 111223478999988 8888776533
Q ss_pred CCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecC--CcEEEEEEecCCcceEEEEEEeCCCCCCCc
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTED--GQYLVMCIEENCDPVNKVYYCDLSALPEGL 283 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 283 (732)
..|.+|++.++....+..+ ..+...+..+.|+|+ |++|+....+ ..+.++|+.+...
T Consensus 79 ------------g~v~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~-- 137 (379)
T 3jrp_A 79 ------------GKVLIWKEENGRWSQIAVH--AVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGT-- 137 (379)
T ss_dssp ------------SCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTTSC--
T ss_pred ------------CEEEEEEcCCCceeEeeee--cCCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCCCc--
Confidence 2578888876532222222 223345678999999 8988776543 3478888876421
Q ss_pred ccccccCCCCCcEEeeecccce-EEEEEe-------------cCCeEEEEeCCCCCCceEEEEeCCCCCCc----eEecc
Q 004766 284 EGFKKRDGLLPFVKLIDGFDAQ-YEVIAN-------------DDTVFTFLTNKDAPKYKIIRVDLKEPNDW----FEVIP 345 (732)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~~~~-~~~~s~-------------dg~~l~~~s~~~~~~~~l~~~d~~~~~~~----~~l~~ 345 (732)
.....+....... ...|+| ++..|+..+.. ..|..+|+.++... ..+..
T Consensus 138 ---------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 138 ---------TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD----NLVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp ---------CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETT----SCEEEEEEETTTTEEEEEEEECC
T ss_pred ---------eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCC----CeEEEEEecCCCcceeeEEEEec
Confidence 1111222211111 224777 57766655443 35777777655421 12222
Q ss_pred CCCCCceeEEEEecC---CEEEEEEecCCeeEEEEEeCCCCce---eeeccc--ccceeeEeecccCCcEEEEEEecCCC
Q 004766 346 EAERDVLESATAVNL---NQMIVSYLSDVKYVLQIRDLKNGSL---LHQLPI--EIGSVNAISARREDSVVFISFTSFLI 417 (732)
Q Consensus 346 ~~~~~~l~~~~~~~~---~~l~~~~~~~g~~~l~~~d~~~g~~---~~~l~~--~~g~v~~~~~s~d~~~l~~~~ss~~~ 417 (732)
+ ...+..+.++++ +.++++...++ .|.+||+.+++. ...+.. ....+..+.++++++.++....
T Consensus 205 h--~~~v~~~~~sp~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~---- 276 (379)
T 3jrp_A 205 H--SDWVRDVAWSPTVLLRSYLASVSQDR--TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG---- 276 (379)
T ss_dssp C--SSCEEEEEECCCCSSSEEEEEEETTS--CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES----
T ss_pred c--cCcEeEEEECCCCCCCCeEEEEeCCC--EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC----
Confidence 3 356888999987 67888888775 578888876531 122222 3456778889999986654432
Q ss_pred CceEEEEECCCC
Q 004766 418 PGIVYQCNLKTE 429 (732)
Q Consensus 418 p~~~y~~d~~~~ 429 (732)
-..++.|++..+
T Consensus 277 dg~i~iw~~~~~ 288 (379)
T 3jrp_A 277 DNKVTLWKENLE 288 (379)
T ss_dssp SSSEEEEEEEET
T ss_pred CCcEEEEeCCCC
Confidence 245666666543
No 302
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.11 E-value=4.4e-10 Score=119.25 Aligned_cols=227 Identities=6% Similarity=-0.042 Sum_probs=133.2
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCC--ceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQ--IVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g--~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
+..++|||||++||... ....|++||+.++ +.+... ........++|+|||+.|+....+.
T Consensus 14 v~~~~~s~~g~~l~~~~-----~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~----------- 77 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTT-----ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR----------- 77 (377)
T ss_dssp CSCCEECSSSSEEECCC-----SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS-----------
T ss_pred EEEEEECCCCCEEEEec-----CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC-----------
Confidence 44788999999988542 2357999999988 333211 1122357899999999888775432
Q ss_pred cccCCcccEEEEEECCCCC-CCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 211 ETDSNLYHEFYYHFLGTKQ-SEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~-~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
.|++|++.++. ......+ ..+...+..+.|+|||++|+....++ .+.++|+.++..
T Consensus 78 --------~v~vwd~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~-------- 134 (377)
T 3dwl_C 78 --------NAYVYEKRPDGTWKQTLVL--LRLNRAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQEND-------- 134 (377)
T ss_dssp --------SEEEC------CCCCEEEC--CCCSSCEEEEECCTTSSCCEEEESSS-----CEEECCC-------------
T ss_pred --------eEEEEEcCCCCceeeeeEe--cccCCceEEEEECCCCCEEEEEecCC-----eEEEEEECCccc--------
Confidence 47888887654 1122222 22334567899999999988766433 377778776320
Q ss_pred CCCCCcEEeeecccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-----------------CceEeccCCCCC
Q 004766 290 DGLLPFVKLIDGFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-----------------DWFEVIPEAERD 350 (732)
Q Consensus 290 ~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-----------------~~~~l~~~~~~~ 350 (732)
......+.......+ ..|+|+++.|+..+.. ..|..+|+.... .....+.+ ..
T Consensus 135 --~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 206 (377)
T 3dwl_C 135 --WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD----RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPS--GG 206 (377)
T ss_dssp --CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS----SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCC--SS
T ss_pred --ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC----CEEEEEEEEecccCCCccccccccccchhhhhhcccC--Cc
Confidence 001223322122222 2588998877765543 346666654211 01111122 35
Q ss_pred ceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCce----eeecccccceeeEeecccCCcEEE
Q 004766 351 VLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL----LHQLPIEIGSVNAISARREDSVVF 409 (732)
Q Consensus 351 ~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~----~~~l~~~~g~v~~~~~s~d~~~l~ 409 (732)
.+..+.+++++.++++...++ .|++||+.+++. +..+..+...+..+.+++++..++
T Consensus 207 ~v~~~~~sp~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 267 (377)
T 3dwl_C 207 WVHAVGFSPSGNALAYAGHDS--SVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVA 267 (377)
T ss_dssp SEEEEEECTTSSCEEEEETTT--EEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEE
T ss_pred eEEEEEECCCCCEEEEEeCCC--cEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEE
Confidence 578899998777777777774 688899887765 445555566677888899987543
No 303
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.11 E-value=4.2e-10 Score=112.47 Aligned_cols=154 Identities=19% Similarity=0.083 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCC-----eeeEEEEcCCcccccccccCCCCCccccccCC
Q 004766 542 FDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD-----LFGCALAHVGVMDMLRYHKFTIGHAWVSDFGC 616 (732)
Q Consensus 542 ~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-----~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~ 616 (732)
.+|+.++++.|.++- .-+++.++||||||+++..++.++|+ .++++|+..+..+........ ..+ ...+.
T Consensus 77 a~~l~~~i~~l~~~~--~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~--~~~-~~~~~ 151 (254)
T 3ds8_A 77 SKWLKIAMEDLKSRY--GFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNG--MDL-SFKKL 151 (254)
T ss_dssp HHHHHHHHHHHHHHH--CCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHC--SCT-TCSSC
T ss_pred HHHHHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccc--ccc-ccccC
Confidence 456666667777652 22689999999999999999999998 899999888766543322110 011 11233
Q ss_pred CCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeC------CCCCCCchHHHHHHHHHHHhhcCCCCCCCCCC
Q 004766 617 SEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD------HDDRVVPLHSLKLLATMQYVLCTSLENSPQTN 690 (732)
Q Consensus 617 p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 690 (732)
|.....+..+.... ..+. ...|+|.++|. +|..||+..+..+...+... ..
T Consensus 152 p~~~~~~~~~~~~~--~~~~-----------~~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~----------~~ 208 (254)
T 3ds8_A 152 PNSTPQMDYFIKNQ--TEVS-----------PDLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGS----------AK 208 (254)
T ss_dssp SSCCHHHHHHHHTG--GGSC-----------TTCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTT----------BS
T ss_pred CcchHHHHHHHHHH--hhCC-----------CCcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhcc----------Cc
Confidence 43222333332211 1111 25799999999 99999999988877666543 23
Q ss_pred CEEEEEeCC--CCCCCCCchHHHHHHHHHHHHHHHHHh
Q 004766 691 PIIGRIERK--AGHGVGLPTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 691 ~~~~~~~~~--~gH~~~~~~~~~~~~~~~~~~fl~~~l 726 (732)
....+++.+ ++|....... +..+.+..||.+..
T Consensus 209 ~~~~~~~~g~~a~Hs~l~~~~---~v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 209 AYIEDIQVGEDAVHQTLHETP---KSIEKTYWFLEKFK 243 (254)
T ss_dssp EEEEEEEESGGGCGGGGGGSH---HHHHHHHHHHHTCC
T ss_pred ceEEEEEeCCCCchhcccCCH---HHHHHHHHHHHHhc
Confidence 345555555 6687544322 35667788887754
No 304
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.09 E-value=2e-08 Score=106.20 Aligned_cols=258 Identities=10% Similarity=0.004 Sum_probs=132.2
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECC-CCceecc-ccc-ceeeeeEEEEeCCcEE-EEEEecCCCCCCCCCCCC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIE-DQIVEAD-ALS-WFKFSSIAWTHDSKGF-FYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~-~g~~~~~-~~~-~~~~~~~~WspDg~~l-~y~~~~~~~~~~~~~~~~ 210 (732)
..++|||||++|+.+ +.+ .|.+||+. +|+.... ... ......++|+|||+.| +|+.... .
T Consensus 43 ~~~a~spdg~~l~~~-~~~-----~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~----------~ 106 (365)
T 1jof_A 43 SWMTFDHERKNIYGA-AMK-----KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQP----------P 106 (365)
T ss_dssp SEEEECTTSSEEEEE-EBT-----EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSST----------T
T ss_pred cEEEECCCCCEEEEE-ccc-----eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCC----------c
Confidence 468899999987544 322 78899987 7775321 110 0113568999999974 4443210 0
Q ss_pred cccCC-----cccEEEEEECCC-CCCCC-eEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCC-CCCCC
Q 004766 211 ETDSN-----LYHEFYYHFLGT-KQSED-ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS-ALPEG 282 (732)
Q Consensus 211 ~~~~~-----~~~~v~~~~lgt-~~~~~-~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~-~~~~~ 282 (732)
..... ....+.++++.. +.... +.++... .......++|||||++|++.. .+. ..|++++++ ++..
T Consensus 107 ~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~spdG~~l~~~~-~~~---~~v~~~~~~~~g~~- 180 (365)
T 1jof_A 107 YAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQ-ENTGIHGMVFDPTETYLYSAD-LTA---NKLWTHRKLASGEV- 180 (365)
T ss_dssp CCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECC-TTCCEEEEEECTTSSEEEEEE-TTT---TEEEEEEECTTSCE-
T ss_pred ceeccceeecCCceEEEEccCCCCcCcceEeeEEeC-CCCcceEEEECCCCCEEEEEc-CCC---CEEEEEEECCCCCE-
Confidence 00000 233566777753 22111 1111111 122456889999999986543 222 458888876 4320
Q ss_pred cccccccCCCCCcEEee--e-cccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCce----Ee--ccCC-CC-C-
Q 004766 283 LEGFKKRDGLLPFVKLI--D-GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWF----EV--IPEA-ER-D- 350 (732)
Q Consensus 283 ~~~~~~~~~~~~~~~l~--~-~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~----~l--~~~~-~~-~- 350 (732)
.....+. . +.......|+|||+.+|+....+ ....++.++.+++. .. .+ ++.. .. .
T Consensus 181 ----------~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-~~v~v~~~~~~~g~-~~~~~~~~~~~~~~~~g~~~ 248 (365)
T 1jof_A 181 ----------ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG-NRICEYVIDPATHM-PVYTHHSFPLIPPGIPDRDP 248 (365)
T ss_dssp ----------EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT-TEEEEEEECTTTCC-EEEEEEEEESSCTTCCCBCT
T ss_pred ----------EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC-CeEEEEEEeCCCCc-EEEccceEEcCCCCcCCccc
Confidence 0011111 1 11222336999999888765432 24455556655554 21 11 2221 01 1
Q ss_pred ------ceeEEE-EecCCE-EEEEEecCC---eeEEEEEeCC-CCceeee---cccccceeeEeeccc---CCcEEEEEE
Q 004766 351 ------VLESAT-AVNLNQ-MIVSYLSDV---KYVLQIRDLK-NGSLLHQ---LPIEIGSVNAISARR---EDSVVFISF 412 (732)
Q Consensus 351 ------~l~~~~-~~~~~~-l~~~~~~~g---~~~l~~~d~~-~g~~~~~---l~~~~g~v~~~~~s~---d~~~l~~~~ 412 (732)
....+. ++++++ |++...... ...|.+|+++ +|+.... +.........+.++| |++.+++..
T Consensus 249 ~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~ 328 (365)
T 1jof_A 249 ETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITD 328 (365)
T ss_dssp TTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEEC
T ss_pred ccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEE
Confidence 466788 888654 554443322 1268888875 5664221 221222234556678 788776543
Q ss_pred ecCCCCceEEEEECCCC
Q 004766 413 TSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 413 ss~~~p~~~y~~d~~~~ 429 (732)
.. -..+..+++...
T Consensus 329 ~~---~~~v~v~~~~~~ 342 (365)
T 1jof_A 329 DQ---EGWLEIYRWKDE 342 (365)
T ss_dssp SS---SCEEEEEEEETT
T ss_pred cC---CCeEEEEEEchh
Confidence 21 245555554443
No 305
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.09 E-value=1.5e-08 Score=106.16 Aligned_cols=245 Identities=9% Similarity=0.009 Sum_probs=148.6
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc--ccceeeeeEEEEeC---CcEEEEEEecCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA--LSWFKFSSIAWTHD---SKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~--~~~~~~~~~~WspD---g~~l~y~~~~~~~~~~~~~ 207 (732)
.+..++|||||++++.+.+... ....|++||+.+++..... ........++|+|+ |+.|+....+
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d--------- 89 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFAR-GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG--------- 89 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--C-CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT---------
T ss_pred ceEEEEEcCCCceEEEecCccC-CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC---------
Confidence 4678999999988776643211 1368999999998753221 11223578999999 5777766433
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEe------EEecCCcEEEEEEecCCcceEEEEEEeCCCCCC
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSG------HVTEDGQYLVMCIEENCDPVNKVYYCDLSALPE 281 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~------~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 281 (732)
..|.+|++.++... +..+... ...+..+ +|+|||++|+....++ .+.++|+.++..
T Consensus 90 ----------g~i~iwd~~~~~~~-~~~~~~~--~~~v~~~~~~~~~~~s~~~~~l~~~~~d~-----~i~vwd~~~~~~ 151 (357)
T 3i2n_A 90 ----------GNLHIWNLEAPEMP-VYSVKGH--KEIINAIDGIGGLGIGEGAPEIVTGSRDG-----TVKVWDPRQKDD 151 (357)
T ss_dssp ----------SCEEEECTTSCSSC-SEEECCC--SSCEEEEEEESGGGCC-CCCEEEEEETTS-----CEEEECTTSCSS
T ss_pred ----------CeEEEEeCCCCCcc-EEEEEec--ccceEEEeeccccccCCCccEEEEEeCCC-----eEEEEeCCCCCC
Confidence 35888998876422 2233322 2234445 4689999987665433 378889876421
Q ss_pred CcccccccCCCCCcEEeeeccc----ceEE-E----EEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCce
Q 004766 282 GLEGFKKRDGLLPFVKLIDGFD----AQYE-V----IANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVL 352 (732)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~----~~~~-~----~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l 352 (732)
+...+..... .... . |+++++.++..+. ...|..+|+.++. ......+ ...+
T Consensus 152 ------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~-~~~~~~~--~~~v 212 (357)
T 3i2n_A 152 ------------PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD----NGDIKLFDLRNMA-LRWETNI--KNGV 212 (357)
T ss_dssp ------------CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET----TSEEEEEETTTTE-EEEEEEC--SSCE
T ss_pred ------------cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc----CCeEEEEECccCc-eeeecCC--CCce
Confidence 1222211110 1111 1 5688887776543 3478999998876 2333333 3568
Q ss_pred eEEEEec---CCEEEEEEecCCeeEEEEEeCCCCceeeecc-----cccceeeEeecccCCcEEEEEEecCCCCceEEEE
Q 004766 353 ESATAVN---LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP-----IEIGSVNAISARREDSVVFISFTSFLIPGIVYQC 424 (732)
Q Consensus 353 ~~~~~~~---~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~-----~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~ 424 (732)
..+.+++ ++..++....++ .|++||+.+++....+. .....+..+.+++++..++++.+. -..+..|
T Consensus 213 ~~~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~iw 287 (357)
T 3i2n_A 213 CSLEFDRKDISMNKLVATSLEG--KFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGG---AGGLHLW 287 (357)
T ss_dssp EEEEESCSSSSCCEEEEEESTT--EEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEET---TSEEEEE
T ss_pred EEEEcCCCCCCCCEEEEECCCC--eEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeC---CCcEEEe
Confidence 8889986 566666666664 68888887555433333 345667788889988755555444 2467788
Q ss_pred ECCCC
Q 004766 425 NLKTE 429 (732)
Q Consensus 425 d~~~~ 429 (732)
|+.++
T Consensus 288 d~~~~ 292 (357)
T 3i2n_A 288 KYEYP 292 (357)
T ss_dssp EEECC
T ss_pred ecCCC
Confidence 87655
No 306
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.09 E-value=6.7e-09 Score=112.92 Aligned_cols=182 Identities=9% Similarity=-0.024 Sum_probs=105.8
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCC----eeEEEeEEecCCc
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHP----KYIFSGHVTEDGQ 255 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~----~~~~~~~~SpDg~ 255 (732)
...++|||||+.|+..+.++ .|.+|+..+ ++.....+. .-+.+++|||||+
T Consensus 88 V~~vawSPdG~~LAs~s~dg-------------------~V~iwd~~~------~l~~l~~~~~~~~~sv~svafSPDG~ 142 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNNG-------------------NVSVFKDNK------MLTNLDSKGNLSSRTYHCFEWNPIES 142 (588)
T ss_dssp EEEEEECSSSSCEEEEETTS-------------------CEEEEETTE------EEEECCCSSCSTTTCEEEEEECSSSS
T ss_pred EEEEEECCCCCEEEEEeCCC-------------------cEEEEeCCc------eeeeccCCCccccccEEEEEEcCCCC
Confidence 47889999999998876443 467777432 222211111 1256899999999
Q ss_pred EEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC--CCcEEeeecc----cceE-EEEEecCCeEEEEeCCCCCCce
Q 004766 256 YLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL--LPFVKLIDGF----DAQY-EVIANDDTVFTFLTNKDAPKYK 328 (732)
Q Consensus 256 ~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~--~~~~~l~~~~----~~~~-~~~s~dg~~l~~~s~~~~~~~~ 328 (732)
+|+..+.++ .|.++++.++... ++ .....+.... .... ..|+||| ++..+. ...
T Consensus 143 ~LAsgs~DG-----tVkIWd~~~~~l~--------~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~----D~t 203 (588)
T 2j04_A 143 SIVVGNEDG-----ELQFFSIRKNSEN--------TPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS----NNS 203 (588)
T ss_dssp CEEEEETTS-----EEEEEECCCCTTT--------CCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET----TCC
T ss_pred EEEEEcCCC-----EEEEEECCCCccc--------cccceeeeeeecccccccccEEEEEEcCCc--EEEEeC----CCe
Confidence 998876543 3777788764210 00 0012221111 1112 2599998 443333 235
Q ss_pred EEEEeCCCCCC---ceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecc-cccceeeEeec--c
Q 004766 329 IIRVDLKEPND---WFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP-IEIGSVNAISA--R 402 (732)
Q Consensus 329 l~~~d~~~~~~---~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~-~~~g~v~~~~~--s 402 (732)
+..+++.++.. ++.+.+.. ...+.++.|+ ++.++.. . + ..|++||+.+++. ..+. .+...+..+.+ +
T Consensus 204 VrlWd~~~~~~~~~~~tL~~~h-~~~V~svaFs-g~~LASa-~-~--~tIkLWd~~~~~~-~~~~~gh~~~V~~va~~~s 276 (588)
T 2j04_A 204 VFSMTVSASSHQPVSRMIQNAS-RRKITDLKIV-DYKVVLT-C-P--GYVHKIDLKNYSI-SSLKTGSLENFHIIPLNHE 276 (588)
T ss_dssp EEEECCCSSSSCCCEEEEECCC-SSCCCCEEEE-TTEEEEE-C-S--SEEEEEETTTTEE-EEEECSCCSCCCEEEETTC
T ss_pred EEEEECCCCccccceeeecccc-cCcEEEEEEE-CCEEEEE-e-C--CeEEEEECCCCeE-EEEEcCCCceEEEEEeeeC
Confidence 88888877652 23343222 2567788888 4555444 3 3 4899999985554 2333 23556777788 8
Q ss_pred cCCcEEEEEE
Q 004766 403 REDSVVFISF 412 (732)
Q Consensus 403 ~d~~~l~~~~ 412 (732)
+|+..+..++
T Consensus 277 ~d~~~La~a~ 286 (588)
T 2j04_A 277 KESTILLMSN 286 (588)
T ss_dssp SSCEEEEECS
T ss_pred CCCCEEEEEc
Confidence 8887665544
No 307
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.08 E-value=1.2e-08 Score=111.07 Aligned_cols=193 Identities=9% Similarity=0.024 Sum_probs=117.4
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccce-----eeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWF-----KFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~-----~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
-.+..++|||||++||-+.. + .++++||.++ .+....... .+.+++|||||+.|+....+
T Consensus 86 ~~V~~vawSPdG~~LAs~s~-d----g~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D-------- 150 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSN-N----GNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED-------- 150 (588)
T ss_dssp CCEEEEEECSSSSCEEEEET-T----SCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT--------
T ss_pred CcEEEEEECCCCCEEEEEeC-C----CcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC--------
Confidence 34789999999999996642 2 3688999544 221100111 25789999999999987643
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCe---EEEec----CCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCC
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDI---LCWKD----PEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~---~v~~~----~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
..|.+|++.++..... .+..- ..+..++.+++||||| ++..+.+ +.++++++.++
T Consensus 151 -----------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D-----~tVrlWd~~~~ 212 (588)
T 2j04_A 151 -----------GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN-----NSVFSMTVSAS 212 (588)
T ss_dssp -----------SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT-----CCEEEECCCSS
T ss_pred -----------CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC-----CeEEEEECCCC
Confidence 3688999877532111 12221 2234578899999999 5444432 33788888764
Q ss_pred CCCcccccccCCCCCcEEeeeccc--ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEec-cCCCCCceeEEE
Q 004766 280 PEGLEGFKKRDGLLPFVKLIDGFD--AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVI-PEAERDVLESAT 356 (732)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~-~~~~~~~l~~~~ 356 (732)
.. ...+..+..+.. ..-..|+ |+.|+..+ ...|..+|+.++. ...+. .+ ...+.++.
T Consensus 213 ~~----------~~~~~tL~~~h~~~V~svaFs--g~~LASa~-----~~tIkLWd~~~~~-~~~~~~gh--~~~V~~va 272 (588)
T 2j04_A 213 SH----------QPVSRMIQNASRRKITDLKIV--DYKVVLTC-----PGYVHKIDLKNYS-ISSLKTGS--LENFHIIP 272 (588)
T ss_dssp SS----------CCCEEEEECCCSSCCCCEEEE--TTEEEEEC-----SSEEEEEETTTTE-EEEEECSC--CSCCCEEE
T ss_pred cc----------ccceeeecccccCcEEEEEEE--CCEEEEEe-----CCeEEEEECCCCe-EEEEEcCC--CceEEEEE
Confidence 21 001223322211 1122476 56666443 2478899988775 32232 33 36678889
Q ss_pred E--ecCCEEEEEEecCCeeEEEEE
Q 004766 357 A--VNLNQMIVSYLSDVKYVLQIR 378 (732)
Q Consensus 357 ~--~~~~~l~~~~~~~g~~~l~~~ 378 (732)
+ ++++..++.+.++|. +|+..
T Consensus 273 ~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 273 LNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp ETTCSSCEEEEECSSCEE-EEEES
T ss_pred eeeCCCCCEEEEEcCCCC-EEEee
Confidence 9 886777888887876 66654
No 308
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.07 E-value=1.5e-08 Score=105.54 Aligned_cols=240 Identities=10% Similarity=-0.021 Sum_probs=145.1
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc----eecccccceeeeeEEEEeCCc-EEEEEEecCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI----VEADALSWFKFSSIAWTHDSK-GFFYSRYPAPKEGKDM 206 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~----~~~~~~~~~~~~~~~WspDg~-~l~y~~~~~~~~~~~~ 206 (732)
-.+..++|||||++|+.... ...|++||+.+++ .............++|+||++ .|+....+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~-----d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------- 78 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSW-----DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ-------- 78 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEET-----TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT--------
T ss_pred CcEEEEEEcCCCCEEEEEcC-----CCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCC--------
Confidence 45778999999999987642 1479999998876 322222222357899999999 88776533
Q ss_pred CCCCcccCCcccEEEEEEC-CCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC-------
Q 004766 207 DAGTETDSNLYHEFYYHFL-GTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA------- 278 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~l-gt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~------- 278 (732)
..|++|++ .++.. ..+....+...+..+.|+| ++.|+....+ ..|.++|+.+
T Consensus 79 -----------g~i~~wd~~~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d-----~~i~iwd~~~~~~~~~~ 138 (342)
T 1yfq_A 79 -----------GEILKVDLIGSPSF---QALTNNEANLGICRICKYG-DDKLIAASWD-----GLIEVIDPRNYGDGVIA 138 (342)
T ss_dssp -----------SCEEEECSSSSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEETT-----SEEEEECHHHHTTBCEE
T ss_pred -----------CeEEEEEeccCCce---EeccccCCCCceEEEEeCC-CCEEEEEcCC-----CeEEEEccccccccccc
Confidence 35889998 66532 2222210334567899999 8888766533 3477888764
Q ss_pred --CCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCC-CCC-ceEeccCCCCCceeE
Q 004766 279 --LPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE-PND-WFEVIPEAERDVLES 354 (732)
Q Consensus 279 --~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~-~~~-~~~l~~~~~~~~l~~ 354 (732)
+.. ...+..........|++++ ++..+. ...|..+|+.+ +.. ...... .....+..
T Consensus 139 ~~~~~-------------~~~~~~~~~v~~~~~~~~~--l~~~~~----d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~ 198 (342)
T 1yfq_A 139 VKNLN-------------SNNTKVKNKIFTMDTNSSR--LIVGMN----NSQVQWFRLPLCEDDNGTIEES-GLKYQIRD 198 (342)
T ss_dssp EEESC-------------SSSSSSCCCEEEEEECSSE--EEEEES----TTEEEEEESSCCTTCCCEEEEC-SCSSCEEE
T ss_pred ccCCe-------------eeEEeeCCceEEEEecCCc--EEEEeC----CCeEEEEECCccccccceeeec-CCCCceeE
Confidence 210 0011111111112366554 544333 34688899887 442 222222 22356788
Q ss_pred EEEec-CCEEEEEEecCCeeEEEEEeCCCC------ceeeeccccc---------ceeeEeecccCCcEEEEEEecCCCC
Q 004766 355 ATAVN-LNQMIVSYLSDVKYVLQIRDLKNG------SLLHQLPIEI---------GSVNAISARREDSVVFISFTSFLIP 418 (732)
Q Consensus 355 ~~~~~-~~~l~~~~~~~g~~~l~~~d~~~g------~~~~~l~~~~---------g~v~~~~~s~d~~~l~~~~ss~~~p 418 (732)
+.+++ ++.+++....++ .+.+|+++.+ +....+.... +.+..+.++++++.++... . -
T Consensus 199 i~~~~~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~---d 272 (342)
T 1yfq_A 199 VALLPKEQEGYACSSIDG--RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG-S---D 272 (342)
T ss_dssp EEECSGGGCEEEEEETTS--EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE-T---T
T ss_pred EEECCCCCCEEEEEecCC--cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEec-C---C
Confidence 89987 677777777775 5667776644 3333343322 2677888899988665332 2 3
Q ss_pred ceEEEEECCCCC
Q 004766 419 GIVYQCNLKTET 430 (732)
Q Consensus 419 ~~~y~~d~~~~~ 430 (732)
..++.||+.+++
T Consensus 273 g~i~vwd~~~~~ 284 (342)
T 1yfq_A 273 GIISCWNLQTRK 284 (342)
T ss_dssp SCEEEEETTTTE
T ss_pred ceEEEEcCccHh
Confidence 579999998773
No 309
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.06 E-value=5.8e-08 Score=103.43 Aligned_cols=251 Identities=8% Similarity=0.002 Sum_probs=147.1
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc------ee-cccccceeeeeEEEEeC----C---cEEEEEEe
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI------VE-ADALSWFKFSSIAWTHD----S---KGFFYSRY 197 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~------~~-~~~~~~~~~~~~~WspD----g---~~l~y~~~ 197 (732)
..+..++|+| ++|+... .+ ..|++||+.+++ .+ ...........++|+|| | +.|+....
T Consensus 17 ~~i~~~~~~~--~~l~s~~-~d----g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~ 89 (397)
T 1sq9_A 17 ADIFSVSACN--SFTVSCS-GD----GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF 89 (397)
T ss_dssp SCEEEEEECS--SEEEEEE-TT----SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred cCeEEEEecC--CeEEEEc-CC----CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcC
Confidence 3467889999 6666543 22 489999999887 22 11112223478999999 8 88887653
Q ss_pred cCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeE-EEecCCC-----CeeEEEeEEe----cCCcE-EEEEEecCCc
Q 004766 198 PAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDIL-CWKDPEH-----PKYIFSGHVT----EDGQY-LVMCIEENCD 266 (732)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~-v~~~~~~-----~~~~~~~~~S----pDg~~-l~~~~~~~~~ 266 (732)
+ ..|++|++.++...... +...... ...+..+.|+ |+|++ |+....++
T Consensus 90 d-------------------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-- 148 (397)
T 1sq9_A 90 S-------------------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-- 148 (397)
T ss_dssp T-------------------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS--
T ss_pred C-------------------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC--
Confidence 3 25788887665431111 2222222 1456789999 99999 66554332
Q ss_pred ceEEEEEEeCCC------CCCCcccccccCCCCCcEEeee--------cccceEEEEEecCCeEEEEeCCCCCCceEEEE
Q 004766 267 PVNKVYYCDLSA------LPEGLEGFKKRDGLLPFVKLID--------GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRV 332 (732)
Q Consensus 267 ~~~~l~~~d~~~------~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~ 332 (732)
.|+++|+.+ +..- . ..+...+.. ........|+|++ .|+. ... ...|..+
T Consensus 149 ---~i~iwd~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~-~~~---dg~i~i~ 212 (397)
T 1sq9_A 149 ---TTYIWKFHPFADESNSLTL--N------WSPTLELQGTVESPMTPSQFATSVDISERG-LIAT-GFN---NGTVQIS 212 (397)
T ss_dssp ---CEEEEEEESSSSHHHHTTT--C------CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEE-ECT---TSEEEEE
T ss_pred ---cEEEEeCCcccccccccee--e------ccCcceeeeeeccccCCCCCceEEEECCCc-eEEE-EeC---CCcEEEE
Confidence 366777665 2210 0 000002211 1111223588988 4443 332 3478899
Q ss_pred eCCCCCCceEecc---C-CCCCceeEEEEecCCEEEEEEecC-CeeEEEEEeCCCCceeeeccc-------------ccc
Q 004766 333 DLKEPNDWFEVIP---E-AERDVLESATAVNLNQMIVSYLSD-VKYVLQIRDLKNGSLLHQLPI-------------EIG 394 (732)
Q Consensus 333 d~~~~~~~~~l~~---~-~~~~~l~~~~~~~~~~l~~~~~~~-g~~~l~~~d~~~g~~~~~l~~-------------~~g 394 (732)
|+.++.....+.. + .....+..+.+++++.+++....+ +...|++||+.+++.+..+.. ...
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 9987653333333 2 003568889998765555554443 335899999988887667765 556
Q ss_pred eeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 395 SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 395 ~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.+..+.++++++.++.. + .-..++.||+.+++
T Consensus 293 ~v~~~~~~~~~~~l~~~-~---~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSA-G---WDGKLRFWDVKTKE 324 (397)
T ss_dssp CEEEEEECSSSSEEEEE-E---TTSEEEEEETTTTE
T ss_pred cEEEEEECCCCCEEEEE-e---CCCeEEEEEcCCCc
Confidence 67788899998865533 2 23589999998774
No 310
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=99.06 E-value=1.7e-09 Score=111.90 Aligned_cols=101 Identities=18% Similarity=0.142 Sum_probs=67.9
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHh-cCcEEEEEcccCCCCCchhHHhcccccCCccHH----HHHHHHHHHHHH
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRH-LGAVFCIANIRGGGEYGEEWHKGGALAKKQNCF----DDFISASEYLIS 554 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~----~D~~~~~~~l~~ 554 (732)
..|+||++||+.++. ..|.. +...|.+ .+|.|+++|+||.|..... .....++ +|+.+.++.|..
T Consensus 37 ~~p~lvllHG~~~~~--~~w~~-~~~~L~~~~~~~via~Dl~GhG~S~~~-------~~~~~~~~~~a~dl~~~l~~l~~ 106 (316)
T 3c5v_A 37 EGPVLLLLHGGGHSA--LSWAV-FTAAIISRVQCRIVALDLRSHGETKVK-------NPEDLSAETMAKDVGNVVEAMYG 106 (316)
T ss_dssp SSCEEEEECCTTCCG--GGGHH-HHHHHHTTBCCEEEEECCTTSTTCBCS-------CTTCCCHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCCccc--ccHHH-HHHHHhhcCCeEEEEecCCCCCCCCCC-------CccccCHHHHHHHHHHHHHHHhc
Confidence 458899999986543 23443 4456772 2999999999998865321 0111233 455555555532
Q ss_pred cCCCCCCcEEEEecChhHHHHHHHHhh--CCCeeeEEEEcCC
Q 004766 555 AGYTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVG 594 (732)
Q Consensus 555 ~~~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p 594 (732)
+. ++++.++||||||++++.++.+ +|+ ++++|+..+
T Consensus 107 -~~--~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~ 144 (316)
T 3c5v_A 107 -DL--PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDV 144 (316)
T ss_dssp -TC--CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESC
T ss_pred -cC--CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcc
Confidence 11 2689999999999999999985 587 788877654
No 311
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.06 E-value=8.4e-08 Score=101.79 Aligned_cols=245 Identities=12% Similarity=0.072 Sum_probs=141.9
Q ss_pred CEEEEeEEECC-CCcEEEEEEeccCCceEEEEEEECCCCceeccccc---ceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 131 TAALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIEDQIVEADALS---WFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 131 ~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
...+..+.||| |+++|+... .+ ..|++||+.++........ ......++|+||++.|+....
T Consensus 118 ~~~v~~~~~~~~~~~~l~s~~-~d----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------- 183 (383)
T 3ei3_B 118 GDAITGMKFNQFNTNQLFVSS-IR----GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS--------- 183 (383)
T ss_dssp TCBEEEEEEETTEEEEEEEEE-TT----TEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEET---------
T ss_pred CCceeEEEeCCCCCCEEEEEe-CC----CEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECC---------
Confidence 34578899999 667666543 22 3799999987553221111 122478999999998887653
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
...|++|++. + +.+..+.. +...+..++|+|+|++++++.... ..|.++|+.+....
T Consensus 184 ----------d~~i~i~d~~-~--~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~d----~~i~iwd~~~~~~~---- 240 (383)
T 3ei3_B 184 ----------TGRLLLLGLD-G--HEIFKEKL--HKAKVTHAEFNPRCDWLMATSSVD----ATVKLWDLRNIKDK---- 240 (383)
T ss_dssp ----------TSEEEEEETT-S--CEEEEEEC--SSSCEEEEEECSSCTTEEEEEETT----SEEEEEEGGGCCST----
T ss_pred ----------CCCEEEEECC-C--CEEEEecc--CCCcEEEEEECCCCCCEEEEEeCC----CEEEEEeCCCCCcc----
Confidence 2368999983 2 22222322 334567899999999444444322 34888898763210
Q ss_pred cccCCCCCcEEeeecccce-EEEEEe-cCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCC-----CCceeEEEEec
Q 004766 287 KKRDGLLPFVKLIDGFDAQ-YEVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE-----RDVLESATAVN 359 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~~~-~~~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~-----~~~l~~~~~~~ 359 (732)
......+ ...... ...|+| +|+.|+..+. ...|..+|+.++.....+..+.. ...+. ..|.+
T Consensus 241 -----~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p 309 (383)
T 3ei3_B 241 -----NSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ----RNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK-ATWHP 309 (383)
T ss_dssp -----TCEEEEE-ECSSCEEEEEECTTTSCEEEEEES----SSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC-CEECS
T ss_pred -----cceEEEe-cCCCceEEEEEcCCCCCEEEEEcC----CCcEEEEECCCCccccccccccccccccccceE-EeccC
Confidence 1112222 222222 235899 8888776544 34788899887653344432220 01122 23443
Q ss_pred CCE-EEEEEecC------CeeEEEEEeCCCCceeeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 360 LNQ-MIVSYLSD------VKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 360 ~~~-l~~~~~~~------g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+.. +.+....+ ....|++||+.+++.+..+..+ .+.+..+.+++++..++.. + -..+..||+.+
T Consensus 310 ~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~-s----d~~i~iw~~~~ 382 (383)
T 3ei3_B 310 MYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG-M----GFNILIWNRED 382 (383)
T ss_dssp SSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE-E----TTEEEEEECC-
T ss_pred CCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe-c----CCcEEEEecCC
Confidence 222 22222211 2257999999888877777653 4556666889999866433 3 26788888753
No 312
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.05 E-value=9.6e-08 Score=97.69 Aligned_cols=232 Identities=11% Similarity=0.068 Sum_probs=142.7
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
.++.|+|+++.|.++-. .+ ..|+.+|.++++........ ....++|+|||+ |++..
T Consensus 16 Egp~w~~~~~~l~~~d~-~~---~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~dG~-l~v~~------------------ 71 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDI-PA---KKVCRWDSFTKQVQRVTMDA-PVSSVALRQSGG-YVATI------------------ 71 (297)
T ss_dssp EEEEEETTTTEEEEEET-TT---TEEEEEETTTCCEEEEECSS-CEEEEEEBTTSS-EEEEE------------------
T ss_pred cCCeEECCCCEEEEEEC-CC---CEEEEEECCCCcEEEEeCCC-ceEEEEECCCCC-EEEEE------------------
Confidence 48999998888877642 22 37999999988753222222 347899999998 55442
Q ss_pred CcccEEEEEECCCCCCCCeEEEecCCC--CeeEEEeEEecCCcEEEEEEecCC-------cceEEEEEEeCCCCCCCccc
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWKDPEH--PKYIFSGHVTEDGQYLVMCIEENC-------DPVNKVYYCDLSALPEGLEG 285 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~~~~~--~~~~~~~~~SpDg~~l~~~~~~~~-------~~~~~l~~~d~~~~~~~~~~ 285 (732)
...|++++..++..+ .+...... ......+.++|||+. ++...... .....||.++..+.
T Consensus 72 --~~~l~~~d~~~g~~~--~~~~~~~~~~~~~~~di~~d~dG~l-~~~~~~~~~~~~~~~~~~~~l~~~d~~g~------ 140 (297)
T 3g4e_A 72 --GTKFCALNWKEQSAV--VLATVDNDKKNNRFNDGKVDPAGRY-FAGTMAEETAPAVLERHQGALYSLFPDHH------ 140 (297)
T ss_dssp --TTEEEEEETTTTEEE--EEEECCTTCSSEEEEEEEECTTSCE-EEEEEECCSBTTBCCTTCEEEEEECTTSC------
T ss_pred --CCeEEEEECCCCcEE--EEEecCCCCCCCCCCCEEECCCCCE-EEecCCcccccccccCCCcEEEEEECCCC------
Confidence 125888888765322 23222111 123457889999994 44432211 12467898886541
Q ss_pred ccccCCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeC--CCCC--CceEeccC-CCCCceeEEEEec
Q 004766 286 FKKRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDL--KEPN--DWFEVIPE-AERDVLESATAVN 359 (732)
Q Consensus 286 ~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~--~~~~--~~~~l~~~-~~~~~l~~~~~~~ 359 (732)
...+...... .-..|+|||+.||+.... ..+|+++++ +++. ..+.+..- .......++.+.+
T Consensus 141 ---------~~~~~~~~~~pngi~~spdg~~lyv~~~~---~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~ 208 (297)
T 3g4e_A 141 ---------VKKYFDQVDISNGLDWSLDHKIFYYIDSL---SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA 208 (297)
T ss_dssp ---------EEEEEEEESBEEEEEECTTSCEEEEEEGG---GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT
T ss_pred ---------EEEEeeccccccceEEcCCCCEEEEecCC---CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC
Confidence 2222222221 123589999988876543 346888876 4443 11222211 1123456778877
Q ss_pred CCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecc-cCCcEEEEEEecC
Q 004766 360 LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISAR-REDSVVFISFTSF 415 (732)
Q Consensus 360 ~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s-~d~~~l~~~~ss~ 415 (732)
++.+++....+ ..|+++|+++|+.+..+..|...+..+.+. +|+++|+++..+.
T Consensus 209 ~G~lwva~~~~--~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 209 EGKLWVACYNG--GRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp TSCEEEEEETT--TEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred CCCEEEEEcCC--CEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 67788776655 469999998898878888775556677776 7888999887654
No 313
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.05 E-value=3.5e-08 Score=102.91 Aligned_cols=223 Identities=10% Similarity=0.004 Sum_probs=125.1
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-cc------ceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LS------WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~------~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
..+.|||||++++++.... .+|+++|+++++.+... .. ......++|+|||+.|++...+.....
T Consensus 46 ~~~~~s~dg~~~~v~~~~~----~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~---- 117 (349)
T 1jmx_B 46 GTAMMAPDNRTAYVLNNHY----GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLN---- 117 (349)
T ss_dssp CEEEECTTSSEEEEEETTT----TEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECS----
T ss_pred ceeEECCCCCEEEEEeCCC----CcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccc----
Confidence 4788999999877665322 37999999998854321 11 111367899999999998864310000
Q ss_pred CCCcccCCcccEEEEEECCCCCCC-CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSE-DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~-~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
.. .......|+++++.++... .+..+..+. ....++|||||+ +++. . .+++++|+.++... ..+
T Consensus 118 -~~--~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~s~dg~-l~~~--~-----~~i~~~d~~~~~~~-~~~ 182 (349)
T 1jmx_B 118 -DH--YVVKPPRLEVFSTADGLEAKPVRTFPMPR---QVYLMRAADDGS-LYVA--G-----PDIYKMDVKTGKYT-VAL 182 (349)
T ss_dssp -SC--EEECCCEEEEEEGGGGGGBCCSEEEECCS---SCCCEEECTTSC-EEEE--S-----SSEEEECTTTCCEE-EEE
T ss_pred -cc--cccCCCeEEEEECCCccccceeeeccCCC---cccceeECCCCc-EEEc--c-----CcEEEEeCCCCcee-ccc
Confidence 00 0011357999998764322 122333322 234678999999 5542 1 12888888764311 000
Q ss_pred cccC------------------CCCCc--E--Eeeec-----------------------------------ccceEEEE
Q 004766 287 KKRD------------------GLLPF--V--KLIDG-----------------------------------FDAQYEVI 309 (732)
Q Consensus 287 ~~~~------------------~~~~~--~--~l~~~-----------------------------------~~~~~~~~ 309 (732)
.... ..... . .+... .......+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (349)
T 1jmx_B 183 PLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLR 262 (349)
T ss_dssp CSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEE
T ss_pred cccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEe
Confidence 0000 00000 0 00000 00001136
Q ss_pred Ee-cCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEEEEEecCCeeEEEEEeCCCCceee
Q 004766 310 AN-DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNGSLLH 387 (732)
Q Consensus 310 s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~~~~~~~g~~~l~~~d~~~g~~~~ 387 (732)
+| ||+.+|+. ..+|+++|+++++ ....++.. .....+.+++++ .|++ ...+ ..|.+||+++++.+.
T Consensus 263 sp~dg~~l~~~------~~~v~~~d~~~~~-~~~~~~~~--~~~~~~~~s~dg~~l~~-~~~~--~~v~v~d~~~~~~~~ 330 (349)
T 1jmx_B 263 SPKDPNQIYGV------LNRLAKYDLKQRK-LIKAANLD--HTYYCVAFDKKGDKLYL-GGTF--NDLAVFNPDTLEKVK 330 (349)
T ss_dssp CSSCTTEEEEE------ESEEEEEETTTTE-EEEEEECS--SCCCEEEECSSSSCEEE-ESBS--SEEEEEETTTTEEEE
T ss_pred cCCCCCEEEEE------cCeEEEEECccCe-EEEEEcCC--CCccceEECCCCCEEEE-ecCC--CeEEEEeccccceee
Confidence 68 88888765 3479999998876 22233322 235678888754 4555 4333 689999998888777
Q ss_pred ecccc
Q 004766 388 QLPIE 392 (732)
Q Consensus 388 ~l~~~ 392 (732)
.+..+
T Consensus 331 ~~~~~ 335 (349)
T 1jmx_B 331 NIKLP 335 (349)
T ss_dssp EEECS
T ss_pred eeecC
Confidence 77665
No 314
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.05 E-value=2e-08 Score=115.94 Aligned_cols=239 Identities=11% Similarity=0.089 Sum_probs=143.2
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...+..+.|||||++|+-.. ...+|+|||+.++..+.... .......++|+||++.|+..+.+.
T Consensus 430 ~~~v~~v~~s~~g~~l~sgs-----~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~---------- 494 (694)
T 3dm0_A 430 SHFVEDVVLSSDGQFALSGS-----WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDR---------- 494 (694)
T ss_dssp SSCEEEEEECTTSSEEEEEE-----TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS----------
T ss_pred CCcEEEEEECCCCCEEEEEe-----CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCC----------
Confidence 34577899999999988553 22489999999987543221 222357899999999988775433
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEec-CCCCeeEEEeEEecCCc--EEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKD-PEHPKYIFSGHVTEDGQ--YLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~~~~~~~~~SpDg~--~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
.|.+|++.+.. ...+... ..+...+..+.|+|++. .|+..+.+ ..|.++|+.+..
T Consensus 495 ---------~i~iwd~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~vwd~~~~~------ 552 (694)
T 3dm0_A 495 ---------TIKLWNTLGEC--KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD-----KTVKVWNLSNCK------ 552 (694)
T ss_dssp ---------CEEEECTTSCE--EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTCC------
T ss_pred ---------EEEEEECCCCc--ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC-----CeEEEEECCCCc------
Confidence 57777764321 1111111 12334567899999984 44433322 237788987632
Q ss_pred cccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEE
Q 004766 287 KKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIV 365 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~ 365 (732)
....+....... ...|+|+|+.|+..+. ...|..+|+.++.....+ . ....+..+.+++++.+++
T Consensus 553 -------~~~~~~~h~~~v~~v~~spdg~~l~sg~~----Dg~i~iwd~~~~~~~~~~-~--~~~~v~~~~~sp~~~~l~ 618 (694)
T 3dm0_A 553 -------LRSTLAGHTGYVSTVAVSPDGSLCASGGK----DGVVLLWDLAEGKKLYSL-E--ANSVIHALCFSPNRYWLC 618 (694)
T ss_dssp -------EEEEECCCSSCEEEEEECTTSSEEEEEET----TSBCEEEETTTTEEEECC-B--CSSCEEEEEECSSSSEEE
T ss_pred -------EEEEEcCCCCCEEEEEEeCCCCEEEEEeC----CCeEEEEECCCCceEEEe-c--CCCcEEEEEEcCCCcEEE
Confidence 122222222211 2258999987765443 346888898876522222 2 235688889998666666
Q ss_pred EEecCCeeEEEEEeCCCCceeeeccccc-------------------ceeeEeecccCCcEEEEEEecCCCCceEEEEEC
Q 004766 366 SYLSDVKYVLQIRDLKNGSLLHQLPIEI-------------------GSVNAISARREDSVVFISFTSFLIPGIVYQCNL 426 (732)
Q Consensus 366 ~~~~~g~~~l~~~d~~~g~~~~~l~~~~-------------------g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~ 426 (732)
....+ .|++||+.+++.+..+.... ..+.++.+++|++.|+ +.+. -..+..+++
T Consensus 619 ~~~~~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~-sgs~---Dg~i~iW~i 691 (694)
T 3dm0_A 619 AATEH---GIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLF-SGYT---DGVIRVWGI 691 (694)
T ss_dssp EEETT---EEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEE-EEET---TSEEEEEEC
T ss_pred EEcCC---CEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEE-EEcC---CCeEEEEec
Confidence 66554 49999998777655443210 1245677889988665 3332 246777765
Q ss_pred C
Q 004766 427 K 427 (732)
Q Consensus 427 ~ 427 (732)
.
T Consensus 692 ~ 692 (694)
T 3dm0_A 692 G 692 (694)
T ss_dssp -
T ss_pred c
Confidence 3
No 315
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.05 E-value=7e-08 Score=100.92 Aligned_cols=210 Identities=14% Similarity=0.027 Sum_probs=109.6
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECC-CCce--eccc-ccc---------eeeeeEEEEeCCcEEEEEEecCCC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIE-DQIV--EADA-LSW---------FKFSSIAWTHDSKGFFYSRYPAPK 201 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~-~g~~--~~~~-~~~---------~~~~~~~WspDg~~l~y~~~~~~~ 201 (732)
..++|||||++|+++...+ ..|.+||+. +|.. +... ..+ .....++|+|||+ ++++..
T Consensus 89 ~~~a~spdg~~l~~~~~~~----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~---- 159 (347)
T 3hfq_A 89 AYVAVDEARQLVYSANYHK----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDL---- 159 (347)
T ss_dssp SEEEEETTTTEEEEEETTT----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEET----
T ss_pred EEEEECCCCCEEEEEeCCC----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeC----
Confidence 3688999999987765322 268888885 4432 1111 000 0134689999999 655432
Q ss_pred CCCCCCCCCcccCCcccEEEEEECCC-CCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCC
Q 004766 202 EGKDMDAGTETDSNLYHEFYYHFLGT-KQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALP 280 (732)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~v~~~~lgt-~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~ 280 (732)
....|+++++.. +.......+..... .....++|||||++|++...... .-.+|.++..++.
T Consensus 160 --------------~~~~v~~~~~~~~g~~~~~~~~~~~~g-~~p~~~~~spdg~~l~v~~~~~~--~v~v~~~~~~~g~ 222 (347)
T 3hfq_A 160 --------------GSDKVYVYNVSDAGQLSEQSVLTMEAG-FGPRHLVFSPDGQYAFLAGELSS--QIASLKYDTQTGA 222 (347)
T ss_dssp --------------TTTEEEEEEECTTSCEEEEEEEECCTT-CCEEEEEECTTSSEEEEEETTTT--EEEEEEEETTTTE
T ss_pred --------------CCCEEEEEEECCCCcEEEeeeEEcCCC-CCCceEEECCCCCEEEEEeCCCC--EEEEEEecCCCCc
Confidence 223688888873 22111111122111 12346899999999877653322 3334444432321
Q ss_pred CCcccccccCCCCCcEEeeec-------ccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEe--ccCCCCCc
Q 004766 281 EGLEGFKKRDGLLPFVKLIDG-------FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEV--IPEAERDV 351 (732)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l--~~~~~~~~ 351 (732)
. .....+... .......|+|||+.||+.... ...|.+++++.....+.+ ++.. ...
T Consensus 223 ~-----------~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~---~~~v~v~~~~~~g~~~~~~~~~~~-~~~ 287 (347)
T 3hfq_A 223 F-----------TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG---YNTLAVFAVTADGHLTLIQQISTE-GDF 287 (347)
T ss_dssp E-----------EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET---TTEEEEEEECGGGCEEEEEEEECS-SSC
T ss_pred e-----------EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC---CCEEEEEEECCCCcEEEeEEEecC-CCC
Confidence 0 001111110 001123589999988875443 235666666522112222 2221 234
Q ss_pred eeEEEEecCCE-EEEEEecCCeeEEEEEeCCCCce
Q 004766 352 LESATAVNLNQ-MIVSYLSDVKYVLQIRDLKNGSL 385 (732)
Q Consensus 352 l~~~~~~~~~~-l~~~~~~~g~~~l~~~d~~~g~~ 385 (732)
...+.+++++. |++....++.-.++.+|.++|+.
T Consensus 288 ~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 288 PRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp CCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred cCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 56788988654 66555555544555557777765
No 316
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.04 E-value=1.2e-08 Score=105.76 Aligned_cols=222 Identities=12% Similarity=-0.029 Sum_probs=130.8
Q ss_pred EEEEEECCCCceecccc-cce--eeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEE
Q 004766 159 TIKLMRIEDQIVEADAL-SWF--KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILC 235 (732)
Q Consensus 159 ~i~v~dl~~g~~~~~~~-~~~--~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v 235 (732)
+|+++|+.+++.+.... ... ....++|+|||+.++++.. ....|+++++.++... ..
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~------------------~~~~v~~~d~~~~~~~--~~ 71 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN------------------KSESLVKIDLVTGETL--GR 71 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET------------------TTTEEEEEETTTCCEE--EE
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC------------------CCCeEEEEECCCCCeE--ee
Confidence 79999999998654222 221 2468999999999888752 2346899998776432 11
Q ss_pred EecCCCC---eeEEEeEEecCCcEEEEEEecC-----Cc--ceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccce
Q 004766 236 WKDPEHP---KYIFSGHVTEDGQYLVMCIEEN-----CD--PVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ 305 (732)
Q Consensus 236 ~~~~~~~---~~~~~~~~SpDg~~l~~~~~~~-----~~--~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 305 (732)
+...... .....++|||||++|++..... .. ....|+++|++++. ....+..+....
T Consensus 72 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-------------~~~~~~~~~~~~ 138 (337)
T 1pby_B 72 IDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-------------RRKAFEAPRQIT 138 (337)
T ss_dssp EECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-------------EEEEEECCSSCC
T ss_pred EEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc-------------EEEEEeCCCCcc
Confidence 2211100 0123678999999988775220 00 13679999987642 112222222222
Q ss_pred EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCC-CCceeEEEEecCC-EEEEEEecCCe-----------
Q 004766 306 YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE-RDVLESATAVNLN-QMIVSYLSDVK----------- 372 (732)
Q Consensus 306 ~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~l~~~~~~~~~-~l~~~~~~~g~----------- 372 (732)
...|+|||+.|++. + ..|+.+|+++++. ...++... ... +.+++++ .+++....++.
T Consensus 139 ~~~~s~dg~~l~~~-~-----~~i~~~d~~~~~~-~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~ 208 (337)
T 1pby_B 139 MLAWARDGSKLYGL-G-----RDLHVMDPEAGTL-VEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKD 208 (337)
T ss_dssp CEEECTTSSCEEEE-S-----SSEEEEETTTTEE-EEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTT
T ss_pred eeEECCCCCEEEEe-C-----CeEEEEECCCCcE-eeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccc
Confidence 23589999988876 1 3599999987752 22222221 111 1333332 23332222111
Q ss_pred ----------eEEEEEeCCCCceeeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 373 ----------YVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 373 ----------~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
..|+++|+.+++.. .+.+. ...+..+.+++|++.+++. -..++.+|+.+++
T Consensus 209 ~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~------~~~v~~~d~~~~~ 271 (337)
T 1pby_B 209 IDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA------YNVLESFDLEKNA 271 (337)
T ss_dssp SCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE------ESEEEEEETTTTE
T ss_pred cccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe------CCeEEEEECCCCc
Confidence 16899999877763 44433 2345567889999988766 2689999998874
No 317
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.04 E-value=5.9e-09 Score=113.16 Aligned_cols=248 Identities=7% Similarity=-0.067 Sum_probs=140.4
Q ss_pred EEEeEEECC-CCcEEEEEEeccCCceEEEEEEECCCCcee---cccccceeeeeEEEEe-CCcEEEEEEecCCCCCCCCC
Q 004766 133 ALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIEDQIVE---ADALSWFKFSSIAWTH-DSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 133 ~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~~g~~~---~~~~~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~~~ 207 (732)
.+..++||| ++++||... .+ .+|+|||+.+++.. ........+..++|+| |++.|+..+.
T Consensus 121 ~V~~l~~~P~~~~~lasGs-~d----g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~---------- 185 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGS-KG----GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM---------- 185 (435)
T ss_dssp CEEEEEECSSCTTCEEEEE-TT----SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS----------
T ss_pred CEEEEEEeCCCCCEEEEEe-CC----CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC----------
Confidence 367899999 566777543 22 47999999887632 1111222357899998 6777665532
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
...|.+|++.+... ..+............++++|||++|+....+ ..|.++|+.+..
T Consensus 186 ---------D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~------- 242 (435)
T 4e54_B 186 ---------EGTTRLQDFKGNIL--RVFASSDTINIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKE------- 242 (435)
T ss_dssp ---------SSCEEEEETTSCEE--EEEECCSSCSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCB-------
T ss_pred ---------CCEEEEeeccCCce--eEEeccCCCCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcce-------
Confidence 23588889865421 1222222222344578999999998765433 337888987632
Q ss_pred ccCCCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEecc-CCCCCceeEEEEecCCEEEE
Q 004766 288 KRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIP-EAERDVLESATAVNLNQMIV 365 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~~l~~~~~~~~~~l~~ 365 (732)
...+........ ..|+|+++.+++....+ ..|..+|+.+......+.. ......+..+.+++++..++
T Consensus 243 -------~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d---~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~ 312 (435)
T 4e54_B 243 -------LWNLRMHKKKVTHVALNPCCDWFLATASVD---QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLL 312 (435)
T ss_dssp -------CCCSBCCSSCEEEEEECTTCSSEEEEEETT---SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEE
T ss_pred -------eEEEecccceEEeeeecCCCceEEEEecCc---ceeeEEecccccccceEEEeeeccccccceeECCCCCeeE
Confidence 111111111111 24888888766555433 3466778876542122211 11125677888888777777
Q ss_pred EEecCCeeEEEEEeCCCCceeeecccccc------eeeEeecccCCcEEEEEEecC--------CCCceEEEEECCCCC
Q 004766 366 SYLSDVKYVLQIRDLKNGSLLHQLPIEIG------SVNAISARREDSVVFISFTSF--------LIPGIVYQCNLKTET 430 (732)
Q Consensus 366 ~~~~~g~~~l~~~d~~~g~~~~~l~~~~g------~v~~~~~s~d~~~l~~~~ss~--------~~p~~~y~~d~~~~~ 430 (732)
+...++ .|++||+.+++....+..... ......+++++..+.+..+.. .....+..+|..+++
T Consensus 313 s~~~D~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~ 389 (435)
T 4e54_B 313 TTDQKS--EIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK 389 (435)
T ss_dssp EEESSS--CEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC
T ss_pred EEcCCC--EEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc
Confidence 777774 688999987765433322110 111223445555554433211 122457788887775
No 318
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=99.03 E-value=5.8e-09 Score=111.39 Aligned_cols=120 Identities=14% Similarity=0.028 Sum_probs=85.0
Q ss_pred CCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHh------cCcEEEEEcccCCCCCchhHHhcc
Q 004766 460 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH------LGAVFCIANIRGGGEYGEEWHKGG 533 (732)
Q Consensus 460 dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~------~G~~v~~~~~rG~g~~g~~~~~~~ 533 (732)
+| .+|++..+.++. +..|.||++||.+++.. .|...+ ..|.+ .||.|+++|.||.|.....
T Consensus 93 ~g-~~i~~~~~~~~~----~~~~pllllHG~~~s~~--~~~~~~-~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~----- 159 (408)
T 3g02_A 93 EG-LTIHFAALFSER----EDAVPIALLHGWPGSFV--EFYPIL-QLFREEYTPETLPFHLVVPSLPGYTFSSGP----- 159 (408)
T ss_dssp TT-EEEEEEEECCSC----TTCEEEEEECCSSCCGG--GGHHHH-HHHHHHCCTTTCCEEEEEECCTTSTTSCCS-----
T ss_pred CC-EEEEEEEecCCC----CCCCeEEEECCCCCcHH--HHHHHH-HHHhcccccccCceEEEEECCCCCCCCCCC-----
Confidence 89 999988776543 34678999999987643 344433 44554 4999999999998854321
Q ss_pred cccCCccHHHHHHHHHHHHHHcCCCCCC-cEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 534 ALAKKQNCFDDFISASEYLISAGYTQSR-KLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 534 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~-~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
......+++++.+.+..|++. ...+ ++.++|+|+||+++..++.++|++.+..+...++
T Consensus 160 -~~~~~~~~~~~a~~~~~l~~~--lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~ 219 (408)
T 3g02_A 160 -PLDKDFGLMDNARVVDQLMKD--LGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNM 219 (408)
T ss_dssp -CSSSCCCHHHHHHHHHHHHHH--TTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCC
T ss_pred -CCCCCCCHHHHHHHHHHHHHH--hCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCC
Confidence 111234567777777666654 2234 8999999999999999999999877777665443
No 319
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.03 E-value=1.4e-07 Score=96.43 Aligned_cols=229 Identities=12% Similarity=-0.001 Sum_probs=131.8
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc--eec-ccccceeeeeEEEEeC--CcEEEEEEecCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI--VEA-DALSWFKFSSIAWTHD--SKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~--~~~-~~~~~~~~~~~~WspD--g~~l~y~~~~~~~~~~~~ 206 (732)
..+..++|||||++||-.. ...+|+|||++++. .+. ..........++|+|+ |+.|+....+
T Consensus 10 ~~V~~~~~s~~g~~las~s-----~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-------- 76 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCS-----SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------- 76 (297)
T ss_dssp SCEEEEEECTTSSEEEEEE-----TTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT--------
T ss_pred CceEEEEECCCCCEEEEEe-----CCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC--------
Confidence 3467899999999998653 22479999997542 221 1111123478999874 7777766533
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecC--CcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTED--GQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
..|.+|++.++....+..+.. +...+..++|+|+ |++|+..+.+ ..+.++|+.++..
T Consensus 77 -----------~~v~iWd~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~~~--- 135 (297)
T 2pm7_B 77 -----------GKVMIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKENGT--- 135 (297)
T ss_dssp -----------TEEEEEEBSSSCBCCCEEECC--CSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSSSC---
T ss_pred -----------CEEEEEEcCCCceEEEEEeec--CCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCCCc---
Confidence 368899987654333333322 2335678999998 8887765533 3477778765310
Q ss_pred cccccCCCCCcEEeeecccce-EEEEEec-------------CCeEEEEeCCCCCCceEEEEeCCCCCC----ceEeccC
Q 004766 285 GFKKRDGLLPFVKLIDGFDAQ-YEVIAND-------------DTVFTFLTNKDAPKYKIIRVDLKEPND----WFEVIPE 346 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~-~~~~s~d-------------g~~l~~~s~~~~~~~~l~~~d~~~~~~----~~~l~~~ 346 (732)
.....+....... ...|+|+ ++.|+. ...+ ..|..+|+.++.. ...+..+
T Consensus 136 --------~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~s-gs~D---~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 136 --------TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT-GGAD---NLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp --------BCCEEEECCSSCEEEEEECCCC------------CCEEEE-EETT---SCEEEEEEETTTTEEEEEEEECCC
T ss_pred --------eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEE-EcCC---CcEEEEEEcCCCceEEEEEEecCC
Confidence 0011121111111 1247775 334443 3322 2466666655431 1233334
Q ss_pred CCCCceeEEEEecC---CEEEEEEecCCeeEEEEEeCCCCc--e-eeecc--cccceeeEeecccCCcEEEE
Q 004766 347 AERDVLESATAVNL---NQMIVSYLSDVKYVLQIRDLKNGS--L-LHQLP--IEIGSVNAISARREDSVVFI 410 (732)
Q Consensus 347 ~~~~~l~~~~~~~~---~~l~~~~~~~g~~~l~~~d~~~g~--~-~~~l~--~~~g~v~~~~~s~d~~~l~~ 410 (732)
. ..+..+.|+++ +.++++...|+ .|.+||+.++. . ...+. .....+..++++++++.|+.
T Consensus 204 ~--~~V~~v~~sp~~~~~~~las~s~D~--~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las 271 (297)
T 2pm7_B 204 S--DWVRDVAWSPTVLLRSYMASVSQDR--TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 271 (297)
T ss_dssp S--SCEEEEEECCCCSSSEEEEEEETTS--CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEE
T ss_pred C--CceEEEEECCCCCCceEEEEEECCC--cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEE
Confidence 3 56888999985 36788888875 67788876532 1 11221 12456778889999986653
No 320
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.03 E-value=3e-07 Score=96.73 Aligned_cols=250 Identities=13% Similarity=0.027 Sum_probs=127.8
Q ss_pred eCCEEEEEEEcC-CCCeeEEEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCC
Q 004766 89 RGNKYFYFHNTG-LQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED 167 (732)
Q Consensus 89 ~g~~~~~~~~~~-~~~~~~l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~ 167 (732)
+|.++|....++ ....-.+|..+..++..+.+...... + .....+++ ||++|+.+...+ ..|.+|++.+
T Consensus 60 dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~---~-~~p~~~~~--dg~~l~~~~~~~----~~v~~~~~~~ 129 (361)
T 3scy_A 60 DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTM---G-ADPCYLTT--NGKNIVTANYSG----GSITVFPIGQ 129 (361)
T ss_dssp TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECS---S-SCEEEEEE--CSSEEEEEETTT----TEEEEEEBCT
T ss_pred CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccC---C-CCcEEEEE--CCCEEEEEECCC----CEEEEEEeCC
Confidence 455565554432 22334457665433443333221111 1 11223445 999877654222 3688999875
Q ss_pred Cceecccc-----c----------ceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCC--
Q 004766 168 QIVEADAL-----S----------WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS-- 230 (732)
Q Consensus 168 g~~~~~~~-----~----------~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-- 230 (732)
...+.... . ......++|+|||+.|+++.. ....|+++++.....
T Consensus 130 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~------------------~~~~v~v~~~~~~~~~~ 191 (361)
T 3scy_A 130 DGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDL------------------GTDQIHKFNINPNANAD 191 (361)
T ss_dssp TSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEET------------------TTTEEEEEEECTTCCTT
T ss_pred CCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeC------------------CCCEEEEEEEcCCCCcc
Confidence 43221100 0 001245899999999888742 223577777664332
Q ss_pred --C-Ce-----EEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeec-
Q 004766 231 --E-DI-----LCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG- 301 (732)
Q Consensus 231 --~-~~-----~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~- 301 (732)
+ -. ........ .....++|||||++|++.... ...|.++++.++.. .....+...
T Consensus 192 ~~~~l~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~----~~~v~v~~~~~g~~-----------~~~~~~~~~~ 255 (361)
T 3scy_A 192 NKEKFLTKGTPEAFKVAPG-SGPRHLIFNSDGKFAYLINEI----GGTVIAFRYADGML-----------DEIQTVAADT 255 (361)
T ss_dssp TCCCCEEEEEEEEEECCTT-CCEEEEEECTTSSEEEEEETT----TCEEEEEEEETTEE-----------EEEEEEESCS
T ss_pred cccceeecccccceecCCC-CCCeEEEEcCCCCEEEEEcCC----CCeEEEEEecCCce-----------EEeEEEecCC
Confidence 1 00 11222221 223578999999998766532 24577777765320 001111110
Q ss_pred --cc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEe--ccCCCCCceeEEEEecCCE-EEEEEecCCeeEE
Q 004766 302 --FD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEV--IPEAERDVLESATAVNLNQ-MIVSYLSDVKYVL 375 (732)
Q Consensus 302 --~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l--~~~~~~~~l~~~~~~~~~~-l~~~~~~~g~~~l 375 (732)
.. .....|+|||+.||+..........+|.++..++. ++.+ ++. ......+.+++++. |++....++.-.+
T Consensus 256 ~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~-~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v 332 (361)
T 3scy_A 256 VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT-LTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQI 332 (361)
T ss_dssp SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC-EEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEE
T ss_pred CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc-EEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEE
Confidence 11 11235899999887544321334445555544554 2222 222 23456788988654 6655555655566
Q ss_pred EEEeCCCCce
Q 004766 376 QIRDLKNGSL 385 (732)
Q Consensus 376 ~~~d~~~g~~ 385 (732)
+.+|.++|+.
T Consensus 333 ~~~d~~~g~~ 342 (361)
T 3scy_A 333 FERDQATGLL 342 (361)
T ss_dssp EEECTTTCCE
T ss_pred EEEECCCCcE
Confidence 6678777775
No 321
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.02 E-value=4.7e-08 Score=102.98 Aligned_cols=212 Identities=6% Similarity=-0.053 Sum_probs=123.4
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc---cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD---ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~---~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
.+..+.|||||++|+.... + ..|++||+++++.... .........++|+||++.|+....+.
T Consensus 54 ~v~~~~~~~~~~~l~~~~~-d----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------- 118 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGT-D----RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR---------- 118 (372)
T ss_dssp CEEEEEEETTTTEEEEEET-T----SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS----------
T ss_pred cccEEEEeCCCCEEEEEcC-C----CeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC----------
Confidence 4778999999999986642 2 3799999998873221 11222357899999999888875332
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc---cc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE---GF 286 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~---~~ 286 (732)
.|++|++.+.............+...+..+.|+|||++|+....++ .++++|+........ ..
T Consensus 119 ---------~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~~~~ 184 (372)
T 1k8k_C 119 ---------VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF-----KCRIFSAYIKEVEERPAPTP 184 (372)
T ss_dssp ---------SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS-----CEEEEECCCTTTSCCCCCBT
T ss_pred ---------EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC-----CEEEEEcccccccccccccc
Confidence 4677777654321111111122234567899999999987765433 377778642110000 00
Q ss_pred cc--cCCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEE
Q 004766 287 KK--RDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQM 363 (732)
Q Consensus 287 ~~--~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l 363 (732)
+. .........+...... ....|+|+++.|+..+. ...|..+|+.++.....+..+ ...+..+.+++++.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~ 258 (372)
T 1k8k_C 185 WGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH----DSTVCLADADKKMAVATLASE--TLPLLAVTFITESSL 258 (372)
T ss_dssp TBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET----TTEEEEEEGGGTTEEEEEECS--SCCEEEEEEEETTEE
T ss_pred cccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC----CCEEEEEECCCCceeEEEccC--CCCeEEEEEecCCCE
Confidence 00 0001112222111111 12258899887776553 346888998877644444333 356788999987777
Q ss_pred EEEEecCCeeEEEEEeCCC
Q 004766 364 IVSYLSDVKYVLQIRDLKN 382 (732)
Q Consensus 364 ~~~~~~~g~~~l~~~d~~~ 382 (732)
++.. .++ .|++|++.+
T Consensus 259 l~~~-~d~--~i~i~~~~~ 274 (372)
T 1k8k_C 259 VAAG-HDC--FPVLFTYDS 274 (372)
T ss_dssp EEEE-TTS--SCEEEEEET
T ss_pred EEEE-eCC--eEEEEEccC
Confidence 7666 554 566777765
No 322
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.02 E-value=2.8e-07 Score=94.56 Aligned_cols=246 Identities=11% Similarity=0.016 Sum_probs=145.3
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
..+..+.|||||++||-.. ...+|++||+++++.+....... .....++++++.|+....+
T Consensus 68 ~~V~~v~~~~~~~~l~sgs-----~Dg~v~iw~~~~~~~~~~~~~h~-~~~~~~~~~~~~l~s~~~~------------- 128 (318)
T 4ggc_A 68 EYISSVAWIKEGNYLAVGT-----SSAEVQLWDVQQQKRLRNMTSHS-ARVGSLSWNSYILSSGSRS------------- 128 (318)
T ss_dssp CCEEEEEECTTSSEEEEEE-----TTSEEEEEETTTTEEEEEEECCS-SCEEEEEEETTEEEEEETT-------------
T ss_pred CeEEEEEECCCCCEEEEEE-----CCCcEEEeecCCceeEEEecCcc-ceEEEeecCCCEEEEEecC-------------
Confidence 4477899999999998553 22489999999998654322211 1345677888877665432
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
..+..+...+... .+..+.. +........++++|++|+....++ .+.++|+.++...
T Consensus 129 ------~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~--------- 185 (318)
T 4ggc_A 129 ------GHIHHHDVRVAEH-HVATLSG--HSQEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPGEGG--------- 185 (318)
T ss_dssp ------SEEEEEETTSSSC-EEEEEEC--CSSCEEEEEECTTSSEEEEEETTS-----CEEEEESSCBTTB---------
T ss_pred ------CceEeeecCCCce-eEEEEcC--ccCceEEEEEcCCCCEEEEEecCc-----ceeEEECCCCccc---------
Confidence 2455666554432 1222222 233456788999999987665433 3778888764321
Q ss_pred CCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEec
Q 004766 292 LLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLS 369 (732)
Q Consensus 292 ~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~ 369 (732)
............. ....+++++..++..... .....|..+|...... ....... ..+....+.++ +.+++.. .
T Consensus 186 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~i~lwd~~~~~~-~~~~~~~--~~v~~~~~~~~~~~~~~~s-g 260 (318)
T 4ggc_A 186 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGAC-LSAVDAH--SQVCSILWSPHYKELISGH-G 260 (318)
T ss_dssp SCCSEEECCCCSCEEEEEECTTSTTEEEEEEC-TTTCEEEEEETTTCCE-EEEEECS--SCEEEEEEETTTTEEEEEE-C
T ss_pred ccceeeecccCCceEEEEecCCCCcEEEEEec-CCCCEEEEEecccccc-cccccce--eeeeeeeecccccceEEEE-E
Confidence 0111111111111 122467776666544332 2244677788777652 2222222 44566667664 4444433 2
Q ss_pred CCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 370 DVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
.....|++||+.+++.+..+..+.+.|..+.+++|++.|+ +.+. -..+..||+..
T Consensus 261 ~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~-S~s~---D~~v~iWd~~~ 315 (318)
T 4ggc_A 261 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA-SAAA---DETLRLWRCFE 315 (318)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE-EEET---TTEEEEECCSC
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEec---CCeEEEEECCC
Confidence 2225799999998988788876777888999999998554 4433 24677777643
No 323
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=99.02 E-value=2.2e-10 Score=127.03 Aligned_cols=131 Identities=22% Similarity=0.151 Sum_probs=89.5
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCC---CCcChhHHHHHHhcCcEEEEEcccCC-CCCchhHHhcc
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT---PSFSVSRTILMRHLGAVFCIANIRGG-GEYGEEWHKGG 533 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~---~~~~~~~~~~l~~~G~~v~~~~~rG~-g~~g~~~~~~~ 533 (732)
+.|. .. +.++.|+.. .+++.|+||++|||...... ..+.. ..++.+.|++|+.+|||.+ -+|+... ..
T Consensus 93 ~edc-l~--l~v~~P~~~-~~~~~Pviv~iHGGg~~~g~~~~~~~~~--~~la~~~g~vvv~~nYRlg~~Gf~~~~--~~ 164 (543)
T 2ha2_A 93 SEDC-LY--LNVWTPYPR-PASPTPVLIWIYGGGFYSGAASLDVYDG--RFLAQVEGAVLVSMNYRVGTFGFLALP--GS 164 (543)
T ss_dssp ESCC-CE--EEEEEESSC-CSSCEEEEEEECCSTTTCCCTTSGGGCT--HHHHHHHCCEEEEECCCCHHHHHCCCT--TC
T ss_pred CCcC-Ce--EEEeecCCC-CCCCCeEEEEECCCccccCCCCCCcCCh--HHHHhcCCEEEEEecccccccccccCC--CC
Confidence 4566 44 455677653 24568999999998533222 23443 2344447999999999953 1222110 00
Q ss_pred cccCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhhC--CCeeeEEEEcCCcc
Q 004766 534 ALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQR--PDLFGCALAHVGVM 596 (732)
Q Consensus 534 ~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~--p~~f~a~v~~~p~~ 596 (732)
........+.|+++|++|+.++- -.||+||.|+|+|+||.+++.++... +.+|+++|+.+|..
T Consensus 165 ~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 165 REAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp SSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 11223346899999999998762 26999999999999999998887752 46999999999864
No 324
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.01 E-value=6.3e-08 Score=98.86 Aligned_cols=239 Identities=6% Similarity=-0.081 Sum_probs=142.3
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
..++.|+|||+.|.++...++ .|+++|.+++ ............+++++|||+ |+++..
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~----~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~-l~v~~~---------------- 87 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQN----RTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGH-LIACSH---------------- 87 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGT----EEEEEETTSC-EEEEESSCSSEEEEEECTTCC-EEEEET----------------
T ss_pred ccCCeEeCCCCEEEEEeCCCC----EEEEEECCCC-eEEEECCCCCcceeeECCCCc-EEEEec----------------
Confidence 358999999997777754333 7999999887 322221222246899999998 444421
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCC--eeEEEeEEecCCcEEEEEEecCC------------cceEEEEEEeCCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHP--KYIFSGHVTEDGQYLVMCIEENC------------DPVNKVYYCDLSAL 279 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~--~~~~~~~~SpDg~~l~~~~~~~~------------~~~~~l~~~d~~~~ 279 (732)
....|++++..++... .+....... .....++++|||+.++.....+. .....||.++..+
T Consensus 88 --~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g- 162 (296)
T 3e5z_A 88 --GLRRLERQREPGGEWE--SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG- 162 (296)
T ss_dssp --TTTEEEEECSTTCCEE--EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS-
T ss_pred --CCCeEEEEcCCCCcEE--EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCC-
Confidence 2246888887655422 222111110 11235789999985432110000 0124788888663
Q ss_pred CCCcccccccCCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCC-CCCCc---eEeccCCCCCceeE
Q 004766 280 PEGLEGFKKRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLK-EPNDW---FEVIPEAERDVLES 354 (732)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~-~~~~~---~~l~~~~~~~~l~~ 354 (732)
. ...+...... .-..|+|||+.+ +.... ..+|++++++ ++. + ..++ ........+
T Consensus 163 ~--------------~~~~~~~~~~~~gi~~s~dg~~l-v~~~~---~~~i~~~~~~~~g~-~~~~~~~~-~~~~~~p~~ 222 (296)
T 3e5z_A 163 T--------------LSAPIRDRVKPNGLAFLPSGNLL-VSDTG---DNATHRYCLNARGE-TEYQGVHF-TVEPGKTDG 222 (296)
T ss_dssp C--------------EEEEECCCSSEEEEEECTTSCEE-EEETT---TTEEEEEEECSSSC-EEEEEEEE-CCSSSCCCS
T ss_pred C--------------EEEeecCCCCCccEEECCCCCEE-EEeCC---CCeEEEEEECCCCc-CcCCCeEe-eCCCCCCCe
Confidence 1 2233322221 123589999877 44332 3478888876 333 3 2333 222234456
Q ss_pred EEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeec-ccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 355 ATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISA-RREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 355 ~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~-s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+.+.+++.+++.. + ..|++|+.+ |+.+..+..+.+ +..+.+ +++++.|+++.. ..+|++++.+++
T Consensus 223 i~~d~~G~l~v~~--~--~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~-----~~l~~~~~~~~~ 288 (296)
T 3e5z_A 223 LRVDAGGLIWASA--G--DGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS-----TEFWSIETNVRG 288 (296)
T ss_dssp EEEBTTSCEEEEE--T--TEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEET-----TEEEEEECSCCB
T ss_pred EEECCCCCEEEEc--C--CeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcC-----CeEEEEEccccc
Confidence 7888767787776 3 469999987 777677776655 666666 578888887643 379999988764
No 325
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.01 E-value=4.6e-07 Score=93.96 Aligned_cols=241 Identities=12% Similarity=0.067 Sum_probs=144.0
Q ss_pred ceEEeCCC-CcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEE
Q 004766 117 AKVLLDPN-TLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYS 195 (732)
Q Consensus 117 ~~~l~D~~-~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~ 195 (732)
.++|++.. .+ ..++.|+||++.|.++-..+ ..|+++|.++++........ ....++|+|||+.++.+
T Consensus 40 ~~~~~~~~~~~-------~egp~~~~~~~~l~~~d~~~----~~i~~~d~~~~~~~~~~~~~-~v~~i~~~~dg~l~v~~ 107 (326)
T 2ghs_A 40 GRVLDETPMLL-------GEGPTFDPASGTAWWFNILE----RELHELHLASGRKTVHALPF-MGSALAKISDSKQLIAS 107 (326)
T ss_dssp CEEEECSCCSB-------EEEEEEETTTTEEEEEEGGG----TEEEEEETTTTEEEEEECSS-CEEEEEEEETTEEEEEE
T ss_pred eEEeeccCCCC-------CcCCeEeCCCCEEEEEECCC----CEEEEEECCCCcEEEEECCC-cceEEEEeCCCeEEEEE
Confidence 46666642 22 24789999988887774332 37999999988743222222 34788999999755432
Q ss_pred EecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCC--CCeeEEEeEEecCCcEEEEEEecC--CcceEEE
Q 004766 196 RYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPE--HPKYIFSGHVTEDGQYLVMCIEEN--CDPVNKV 271 (732)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~--~~~~~~~~~~SpDg~~l~~~~~~~--~~~~~~l 271 (732)
. ..|++++..++... .+..... .......+.++|||+.. +..... ......|
T Consensus 108 -~--------------------~gl~~~d~~~g~~~--~~~~~~~~~~~~~~~~i~~d~~G~l~-v~~~~~~~~~~~~~l 163 (326)
T 2ghs_A 108 -D--------------------DGLFLRDTATGVLT--LHAELESDLPGNRSNDGRMHPSGALW-IGTMGRKAETGAGSI 163 (326)
T ss_dssp -T--------------------TEEEEEETTTCCEE--EEECSSTTCTTEEEEEEEECTTSCEE-EEEEETTCCTTCEEE
T ss_pred -C--------------------CCEEEEECCCCcEE--EEeeCCCCCCCCCCCCEEECCCCCEE-EEeCCCcCCCCceEE
Confidence 1 13888887665422 2222111 11345678999999854 333221 0124679
Q ss_pred EEEeCCCCCCCcccccccCCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCC--CC-C--CceEecc
Q 004766 272 YYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLK--EP-N--DWFEVIP 345 (732)
Q Consensus 272 ~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~--~~-~--~~~~l~~ 345 (732)
|.++ .+ . ...+...... ....|++||+.+|+.... ..+|++++++ ++ . ..+.+..
T Consensus 164 ~~~~-~g-~--------------~~~~~~~~~~~~~i~~s~dg~~lyv~~~~---~~~I~~~d~~~~~Gl~~~~~~~~~~ 224 (326)
T 2ghs_A 164 YHVA-KG-K--------------VTKLFADISIPNSICFSPDGTTGYFVDTK---VNRLMRVPLDARTGLPTGKAEVFID 224 (326)
T ss_dssp EEEE-TT-E--------------EEEEEEEESSEEEEEECTTSCEEEEEETT---TCEEEEEEBCTTTCCBSSCCEEEEE
T ss_pred EEEe-CC-c--------------EEEeeCCCcccCCeEEcCCCCEEEEEECC---CCEEEEEEcccccCCcccCceEEEE
Confidence 9998 32 2 2223222211 123589999988886443 3479999875 44 2 1122211
Q ss_pred -CCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecc-cCCcEEEEEEecC
Q 004766 346 -EAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISAR-REDSVVFISFTSF 415 (732)
Q Consensus 346 -~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s-~d~~~l~~~~ss~ 415 (732)
........++.+.+++.+++....+ ..|++++.+ |+.++.+..+...+..+.++ ++++.|+++....
T Consensus 225 ~~~~~~~p~gi~~d~~G~lwva~~~~--~~v~~~d~~-g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 225 STGIKGGMDGSVCDAEGHIWNARWGE--GAVDRYDTD-GNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp CTTSSSEEEEEEECTTSCEEEEEETT--TEEEEECTT-CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CCCCCCCCCeeEECCCCCEEEEEeCC--CEEEEECCC-CCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 1112345677777667777765544 379999984 77667777765556677776 7888888776554
No 326
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=99.01 E-value=2.4e-10 Score=126.48 Aligned_cols=225 Identities=19% Similarity=0.174 Sum_probs=131.1
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCc---cCCCCcChhHHHHHHhcCcEEEEEcccCCC-CCchhHHhcc
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNI---SVTPSFSVSRTILMRHLGAVFCIANIRGGG-EYGEEWHKGG 533 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~---~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g-~~g~~~~~~~ 533 (732)
+.|. . .+.++.|+.. .++.|+||++|||... .....|.. ..++.+.|++|+.+|||.+. +|...- ..
T Consensus 91 sedc-l--~lnv~~P~~~--~~~~Pv~v~iHGG~~~~g~~~~~~~~~--~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~ 161 (537)
T 1ea5_A 91 SEDC-L--YLNIWVPSPR--PKSTTVMVWIYGGGFYSGSSTLDVYNG--KYLAYTEEVVLVSLSYRVGAFGFLALH--GS 161 (537)
T ss_dssp CSCC-C--EEEEEECSSC--CSSEEEEEEECCSTTTCCCTTCGGGCT--HHHHHHHTCEEEECCCCCHHHHHCCCT--TC
T ss_pred CCcC-C--eEEEeccCCC--CCCCeEEEEECCCcccCCCCCCCccCh--HHHHhcCCEEEEEeccCccccccccCC--CC
Confidence 4455 4 4455678653 3678999999998433 22223443 34454689999999999531 111000 00
Q ss_pred cccCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhh--CCCeeeEEEEcCCccccccccc-CCC-
Q 004766 534 ALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGVMDMLRYHK-FTI- 606 (732)
Q Consensus 534 ~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p~~d~~~~~~-~~~- 606 (732)
....+...+.|..+|++|+.++- -.||+||.|+|+|+||.+++.++.. .+.+|+++|+.+|......... ...
T Consensus 162 ~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~~~~~~~~~~~~ 241 (537)
T 1ea5_A 162 QEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPNCPWASVSVAEG 241 (537)
T ss_dssp SSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTTCTTSCBCHHHH
T ss_pred CCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCccCCccccCHHHH
Confidence 11223346899999999998862 3699999999999999999988875 2468999999999754211110 000
Q ss_pred ---CCccccccCCCC--CHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcC
Q 004766 607 ---GHAWVSDFGCSE--EEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCT 681 (732)
Q Consensus 607 ---~~~~~~~~g~p~--~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~ 681 (732)
........|++. ..+..+.|++.++-..+........ ......+...-.-|..+-+.++.++.+.-+..
T Consensus 242 ~~~~~~~a~~lgc~~~~~~~~~~cLr~~~~~~l~~a~~~~~~---~~~~~~~~f~PvvDg~~lp~~p~~~~~~g~~~--- 315 (537)
T 1ea5_A 242 RRRAVELGRNLNCNLNSDEELIHCLREKKPQELIDVEWNVLP---FDSIFRFSFVPVIDGEFFPTSLESMLNSGNFK--- 315 (537)
T ss_dssp HHHHHHHHHHTTCCCSSHHHHHHHHHHSCHHHHHHHGGGGCS---SSCSSCCSSCCBCCSSSSSSCHHHHHHHTCSC---
T ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHhhCCHHHHHHHHhhhcc---ccccccccceeeECcccCCcCHHHHHhcCCCC---
Confidence 001113456652 3445677777655322211000000 00000111122236667777777665543322
Q ss_pred CCCCCCCCCCEEEEEeCCCCCCC
Q 004766 682 SLENSPQTNPIIGRIERKAGHGV 704 (732)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~gH~~ 704 (732)
++|+.+-...++|+.+
T Consensus 316 -------~vp~liG~~~~Eg~~f 331 (537)
T 1ea5_A 316 -------KTQILLGVNKDEGSFF 331 (537)
T ss_dssp -------CSCEEEEEETBTTHHH
T ss_pred -------CCCEEEeeecchhHHH
Confidence 7899999999998743
No 327
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.01 E-value=4e-07 Score=94.45 Aligned_cols=252 Identities=11% Similarity=0.047 Sum_probs=146.6
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
..++.|+|||+ |.++. ..+ ..|+++|+++++..... .......+++|+|||+ |+++....
T Consensus 47 ~~~~~~~~~g~-l~~~~-~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~------------- 107 (333)
T 2dg1_A 47 LEGLNFDRQGQ-LFLLD-VFE---GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGD------------- 107 (333)
T ss_dssp EEEEEECTTSC-EEEEE-TTT---CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSC-EEEEECTT-------------
T ss_pred ccCcEECCCCC-EEEEE-CCC---CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCc-EEEEeCCC-------------
Confidence 46889999998 44332 222 37999999988754321 1112347899999997 44443211
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecC--CcceEEEEEEeCCCCCCCcccccccC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEEN--CDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~--~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
......|++++..++... .+............+.++|||+.++ ..... ......||.++.+++.
T Consensus 108 -~~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~i~~d~~g~l~v-~~~~~~~~~~~~~l~~~~~~~~~---------- 173 (333)
T 2dg1_A 108 -FKSTGGIFAATENGDNLQ--DIIEDLSTAYCIDDMVFDSKGGFYF-TDFRGYSTNPLGGVYYVSPDFRT---------- 173 (333)
T ss_dssp -SSSCCEEEEECTTSCSCE--EEECSSSSCCCEEEEEECTTSCEEE-EECCCBTTBCCEEEEEECTTSCC----------
T ss_pred -CCCCceEEEEeCCCCEEE--EEEccCccCCcccceEECCCCCEEE-EeccccccCCCceEEEEeCCCCE----------
Confidence 011246888887765322 1222111123456789999997544 33211 1124679999876532
Q ss_pred CCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCC-CCCceE----ec-cCCCCCceeEEEEecCCEE
Q 004766 291 GLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE-PNDWFE----VI-PEAERDVLESATAVNLNQM 363 (732)
Q Consensus 291 ~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~-~~~~~~----l~-~~~~~~~l~~~~~~~~~~l 363 (732)
...+...... ....|++||+.+|+.... ...|+++++++ +..... +. .........++.+.+++.+
T Consensus 174 ----~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l 246 (333)
T 2dg1_A 174 ----VTPIIQNISVANGIALSTDEKVLWVTETT---ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNL 246 (333)
T ss_dssp ----EEEEEEEESSEEEEEECTTSSEEEEEEGG---GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCE
T ss_pred ----EEEeecCCCcccceEECCCCCEEEEEeCC---CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCE
Confidence 2233222211 123588999888876543 34788888853 221221 11 1111134567788776777
Q ss_pred EEEEecCCeeEEEEEeCCCCceeeecccccc------eeeEeecccCCcEEEEEEecC--CCCceEEEEECCC
Q 004766 364 IVSYLSDVKYVLQIRDLKNGSLLHQLPIEIG------SVNAISARREDSVVFISFTSF--LIPGIVYQCNLKT 428 (732)
Q Consensus 364 ~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g------~v~~~~~s~d~~~l~~~~ss~--~~p~~~y~~d~~~ 428 (732)
++....+ ..|+++|.+ |+.++.+..+.. .+..+.+++|++.|+++.+.- .....+|++++..
T Consensus 247 ~v~~~~~--~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 247 YVAMYGQ--GRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp EEEEETT--TEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECSS
T ss_pred EEEEcCC--CEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEeccc
Confidence 7776554 478899985 766566665532 456677788888888776553 2346788888653
No 328
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.00 E-value=1.6e-07 Score=98.25 Aligned_cols=236 Identities=11% Similarity=0.016 Sum_probs=138.9
Q ss_pred EEEeEEE-----CC-CCcEEEEEEeccCCceEEEEEEECCCCce-------ec-ccccceeeeeEEEEeCCcEEEEEEec
Q 004766 133 ALIKVSV-----SE-DAKYLAYALSYSGSDWATIKLMRIEDQIV-------EA-DALSWFKFSSIAWTHDSKGFFYSRYP 198 (732)
Q Consensus 133 ~~~~~~~-----SP-DG~~la~~~~~~G~e~~~i~v~dl~~g~~-------~~-~~~~~~~~~~~~WspDg~~l~y~~~~ 198 (732)
.+..+.| +| ||++|+-.. ...+|++||+.+++. .. ..........++|+||++.|+....+
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs-----~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D 97 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGS-----RDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD 97 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEE-----TTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETT
T ss_pred hhhheeeEEEeecCCCCCEEEEEc-----CCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCC
Confidence 3567777 77 999887443 224799999976431 11 11111124789999999988766533
Q ss_pred CCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 199 APKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
..|.+|++.++.. +..+.. +...+..++|+|||++|+..+.++ .+.++|+.+
T Consensus 98 -------------------~~v~lwd~~~~~~--~~~~~~--h~~~v~~v~~sp~~~~l~s~~~d~-----~i~~wd~~~ 149 (343)
T 2xzm_R 98 -------------------KTLRLWDLRTGTT--YKRFVG--HQSEVYSVAFSPDNRQILSAGAER-----EIKLWNILG 149 (343)
T ss_dssp -------------------SEEEEEETTSSCE--EEEEEC--CCSCEEEEEECSSTTEEEEEETTS-----CEEEEESSS
T ss_pred -------------------CcEEEEECCCCcE--EEEEcC--CCCcEEEEEECCCCCEEEEEcCCC-----EEEEEeccC
Confidence 3689999877542 122322 334567899999999987665433 377778764
Q ss_pred CCCCcccccccCCCCCcEEee---eccc-ceEEEEEecC----------CeEEEEeCCCCCCceEEEEeCCCCCCceEec
Q 004766 279 LPEGLEGFKKRDGLLPFVKLI---DGFD-AQYEVIANDD----------TVFTFLTNKDAPKYKIIRVDLKEPNDWFEVI 344 (732)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~---~~~~-~~~~~~s~dg----------~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~ 344 (732)
.. ..... .... .....|+|++ ..|+..+. ...|..+|..... ...+.
T Consensus 150 ~~--------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~~-~~~~~ 210 (343)
T 2xzm_R 150 EC--------------KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGW----DGRLKVWNTNFQI-RYTFK 210 (343)
T ss_dssp CE--------------EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEET----TSEEEEEETTTEE-EEEEE
T ss_pred Cc--------------eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcC----CCEEEEEcCCCce-eEEEc
Confidence 21 00000 0000 1112366665 34443322 3467778843321 23333
Q ss_pred cCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCC-ceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEE
Q 004766 345 PEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNG-SLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQ 423 (732)
Q Consensus 345 ~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g-~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~ 423 (732)
.+. ..+..+.+++++.++++...++ .|++||+.+. .....+. ....+..+.++|++..+... + -..+..
T Consensus 211 ~h~--~~v~~~~~s~~g~~l~sgs~dg--~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~--~---d~~v~i 280 (343)
T 2xzm_R 211 AHE--SNVNHLSISPNGKYIATGGKDK--KLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVG--T---DQGVKI 280 (343)
T ss_dssp CCS--SCEEEEEECTTSSEEEEEETTC--EEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEE--E---SSCEEE
T ss_pred Ccc--ccceEEEECCCCCEEEEEcCCC--eEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEE--C---CCCEEE
Confidence 443 5688899998777788887774 7889998433 2222222 23457788889998755432 2 235888
Q ss_pred EECCCCC
Q 004766 424 CNLKTET 430 (732)
Q Consensus 424 ~d~~~~~ 430 (732)
+|+.+++
T Consensus 281 w~~~~~~ 287 (343)
T 2xzm_R 281 FNLMTQS 287 (343)
T ss_dssp EESSSCC
T ss_pred EEeCCCC
Confidence 8887764
No 329
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.00 E-value=2.4e-08 Score=106.95 Aligned_cols=247 Identities=12% Similarity=0.083 Sum_probs=146.0
Q ss_pred CCEEEEeEEECC-CCcEEEEEEeccCCceEEEEEEECCCCce-------ec-ccccceeeeeEEEEeCCc-EEEEEEecC
Q 004766 130 GTAALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIEDQIV-------EA-DALSWFKFSSIAWTHDSK-GFFYSRYPA 199 (732)
Q Consensus 130 ~~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~~g~~-------~~-~~~~~~~~~~~~WspDg~-~l~y~~~~~ 199 (732)
+...+..+.||| |+++||.... ...|+|||+.++.. +. ..........++|+||++ .|+....
T Consensus 80 h~~~V~~~~~~p~~~~~l~s~s~-----dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~-- 152 (402)
T 2aq5_A 80 HTAPVLDIAWCPHNDNVIASGSE-----DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC-- 152 (402)
T ss_dssp CSSCEEEEEECTTCTTEEEEEET-----TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET--
T ss_pred CCCCEEEEEeCCCCCCEEEEEeC-----CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC--
Confidence 345688999999 8988876632 24799999998732 11 111122357899999985 5554432
Q ss_pred CCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCC
Q 004766 200 PKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
...|++|++.++.. +..+....+...+..++|+|||++|+....+ ..|.++|+.++
T Consensus 153 -----------------dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~ 208 (402)
T 2aq5_A 153 -----------------DNVILVWDVGTGAA--VLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKG 208 (402)
T ss_dssp -----------------TSCEEEEETTTTEE--EEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTT
T ss_pred -----------------CCEEEEEECCCCCc--cEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCC
Confidence 23588999886532 1222102334456789999999998876543 34888998764
Q ss_pred CCCcccccccCCCCCcEEeeecc-c--ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEE
Q 004766 280 PEGLEGFKKRDGLLPFVKLIDGF-D--AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESAT 356 (732)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~~-~--~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~ 356 (732)
. ....+.... . .....|+|+|..|+...+. .....|..+|+.+......+........+..+.
T Consensus 209 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 209 T-------------VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSR-MSERQVALWDTKHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp E-------------EEEEEECSSCSSSCCEEEECSTTEEEEEEECT-TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred c-------------eeeeeccCCCCCcceEEEEcCCCcEEEEeccC-CCCceEEEEcCccccCCceEEeccCCCceeEEE
Confidence 2 122221111 1 1233588987655543221 235689999998765211222211124567788
Q ss_pred EecCCE-EEEEEecCCeeEEEEEeCCCCce-eeeccc--ccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 357 AVNLNQ-MIVSYLSDVKYVLQIRDLKNGSL-LHQLPI--EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 357 ~~~~~~-l~~~~~~~g~~~l~~~d~~~g~~-~~~l~~--~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+++++. +++....++ .|++|++.+++. +..+.. ..+.+..+.+++++..++ ++ -..+..|++.++
T Consensus 275 ~s~~~~~l~~~g~~dg--~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~---s~---~~~~~~~~l~~~ 343 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDS--SIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV---NK---CEIARFYKLHER 343 (402)
T ss_dssp EETTTTEEEEEETTCS--CEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG---GG---TEEEEEEEEETT
T ss_pred EcCCCCEEEEEEcCCC--eEEEEEecCCCcceEeecccccCCcccceEEecccccce---ec---ceeEEEEEcCCC
Confidence 887644 555555564 688889887763 334432 235566778888876432 11 125566666565
No 330
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.00 E-value=3.1e-08 Score=103.65 Aligned_cols=242 Identities=6% Similarity=-0.027 Sum_probs=142.9
Q ss_pred EEEeEEECCC---CcEEEEEEeccCCceEEEEEEECCCCc-eecc-cccceeeeeE------EEEeCCcEEEEEEecCCC
Q 004766 133 ALIKVSVSED---AKYLAYALSYSGSDWATIKLMRIEDQI-VEAD-ALSWFKFSSI------AWTHDSKGFFYSRYPAPK 201 (732)
Q Consensus 133 ~~~~~~~SPD---G~~la~~~~~~G~e~~~i~v~dl~~g~-~~~~-~~~~~~~~~~------~WspDg~~l~y~~~~~~~ 201 (732)
.+..+.|+|+ |++|+.... + ..|++||+.+++ .+.. .........+ +|+||++.|+....+
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~-d----g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d--- 138 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDF-G----GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD--- 138 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEET-T----SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETT---
T ss_pred cEEEEEEcCCCCCCceEEEecC-C----CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCC---
Confidence 3678899999 688876532 2 379999999887 3321 1111123455 467899988876533
Q ss_pred CCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCC--CeeEEEeE----EecCCcEEEEEEecCCcceEEEEEEe
Q 004766 202 EGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEH--PKYIFSGH----VTEDGQYLVMCIEENCDPVNKVYYCD 275 (732)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~--~~~~~~~~----~SpDg~~l~~~~~~~~~~~~~l~~~d 275 (732)
..|.+|++.++.... ..+..... ......+. |+|++++|+....+ ..|.++|
T Consensus 139 ----------------~~i~vwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d 196 (357)
T 3i2n_A 139 ----------------GTVKVWDPRQKDDPV-ANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-----GDIKLFD 196 (357)
T ss_dssp ----------------SCEEEECTTSCSSCS-EEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT-----SEEEEEE
T ss_pred ----------------CeEEEEeCCCCCCcc-eeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC-----CeEEEEE
Confidence 358888887764222 22322111 11233444 88999998876533 3488899
Q ss_pred CCCCCCCcccccccCCCCCcEEeeeccc-ceEEEEEe---cCCeEEEEeCCCCCCceEEEEeCCCCCCceEec-----cC
Q 004766 276 LSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIAN---DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVI-----PE 346 (732)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~---dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~-----~~ 346 (732)
+.++. ......... .....|+| +++.|+..+.. ..|..+|+.++.....+. .+
T Consensus 197 ~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~ 258 (357)
T 3i2n_A 197 LRNMA--------------LRWETNIKNGVCSLEFDRKDISMNKLVATSLE----GKFHVFDMRTQHPTKGFASVSEKAH 258 (357)
T ss_dssp TTTTE--------------EEEEEECSSCEEEEEESCSSSSCCEEEEEEST----TEEEEEEEEEEETTTEEEEEEEECC
T ss_pred CccCc--------------eeeecCCCCceEEEEcCCCCCCCCEEEEECCC----CeEEEEeCcCCCcccceeeeccCCC
Confidence 88742 111111111 11225888 78877765442 367777776543222221 33
Q ss_pred CCCCceeEEEEecCCE-EEEEEecCCeeEEEEEeCCCCce-------------------eeecccccceeeEeecccCCc
Q 004766 347 AERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDLKNGSL-------------------LHQLPIEIGSVNAISARREDS 406 (732)
Q Consensus 347 ~~~~~l~~~~~~~~~~-l~~~~~~~g~~~l~~~d~~~g~~-------------------~~~l~~~~g~v~~~~~s~d~~ 406 (732)
...+..+.+++++. ++++...++ .|++||+.++.. +..+....+.+..+.++++++
T Consensus 259 --~~~v~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 334 (357)
T 3i2n_A 259 --KSTVWQVRHLPQNRELFLTAGGAG--GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKR 334 (357)
T ss_dssp --SSCEEEEEEETTEEEEEEEEETTS--EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSST
T ss_pred --cCCEEEEEECCCCCcEEEEEeCCC--cEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCC
Confidence 35688899998655 778887775 677788764432 122333355677888999998
Q ss_pred EEEEEEecCCCCceEEEEECCCC
Q 004766 407 VVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 407 ~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.++++.+. -..+..||+.+.
T Consensus 335 ~l~~s~~~---d~~i~iw~~~~~ 354 (357)
T 3i2n_A 335 GLCVCSSF---DQTVRVLIVTKL 354 (357)
T ss_dssp TEEEEEET---TSEEEEEEECC-
T ss_pred eEEEEecC---CCcEEEEECCCc
Confidence 77655543 246888887654
No 331
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.99 E-value=6.9e-08 Score=104.64 Aligned_cols=243 Identities=11% Similarity=0.085 Sum_probs=140.6
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce-----------ecc-cccc------------eeeeeEEEEeC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV-----------EAD-ALSW------------FKFSSIAWTHD 188 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~-----------~~~-~~~~------------~~~~~~~WspD 188 (732)
.+..++|||||++||.... ...|+|||+.+++. +.. .... .....++|+|+
T Consensus 30 ~V~~v~~s~~g~~la~g~~-----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDK-----GGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp SEEEEEECSSSSEEEEEET-----TSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cEEEEEECCCCCEEEEEcC-----CCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 3678999999999987642 24799999987762 111 1111 22477999999
Q ss_pred C--cEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCC-----------------------------------
Q 004766 189 S--KGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSE----------------------------------- 231 (732)
Q Consensus 189 g--~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~----------------------------------- 231 (732)
+ ..|+....+. .|.+|++.++...
T Consensus 105 ~~~~~l~s~s~d~-------------------~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 165 (447)
T 3dw8_B 105 KNAAQFLLSTNDK-------------------TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVE 165 (447)
T ss_dssp CSSSEEEEEECSS-------------------CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEE
T ss_pred CCcceEEEeCCCC-------------------eEEEEecccccCCcceecccCccccccCcccccceEeccccchheeee
Confidence 8 6777665432 3555555431100
Q ss_pred --CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEe------eeccc
Q 004766 232 --DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKL------IDGFD 303 (732)
Q Consensus 232 --~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l------~~~~~ 303 (732)
...++.. .+...+..++|+|||++|+.. .+ ..|.++|+.... .....+ ..+..
T Consensus 166 ~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~-~d-----~~i~iwd~~~~~------------~~~~~~~~~~~~~~~~~ 226 (447)
T 3dw8_B 166 ASPRRIFAN-AHTYHINSISINSDYETYLSA-DD-----LRINLWHLEITD------------RSFNIVDIKPANMEELT 226 (447)
T ss_dssp EEEEEEECS-CCSSCCCEEEECTTSSEEEEE-CS-----SEEEEEETTEEE------------EEEEEEECCCSSGGGCC
T ss_pred ccceEEecc-CCCcceEEEEEcCCCCEEEEe-CC-----CeEEEEECCCCC------------ceeeeeecccccccccC
Confidence 0001111 122345578999999998754 32 347888887311 001111 01111
Q ss_pred ce--EEEEEecC-CeEEEEeCCCCCCceEEEEeCCCCCC----ceEeccCCCC-----------CceeEEEEecCCEEEE
Q 004766 304 AQ--YEVIANDD-TVFTFLTNKDAPKYKIIRVDLKEPND----WFEVIPEAER-----------DVLESATAVNLNQMIV 365 (732)
Q Consensus 304 ~~--~~~~s~dg-~~l~~~s~~~~~~~~l~~~d~~~~~~----~~~l~~~~~~-----------~~l~~~~~~~~~~l~~ 365 (732)
.. ...|+|+| ..|+..+. ...|..+|+.++.. ...+..+. . ..+..+.+++++.+++
T Consensus 227 ~~v~~~~~~p~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 301 (447)
T 3dw8_B 227 EVITAAEFHPNSCNTFVYSSS----KGTIRLCDMRASALCDRHSKLFEEPE-DPSNRSFFSEIISSISDVKFSHSGRYMM 301 (447)
T ss_dssp CCEEEEEECSSCTTEEEEEET----TSCEEEEETTTCSSSCTTCEEECCC------CCHHHHHTTCEEEEEECTTSSEEE
T ss_pred cceEEEEECCCCCcEEEEEeC----CCeEEEEECcCCccccceeeEeccCC-CccccccccccCceEEEEEECCCCCEEE
Confidence 11 22589998 55555443 23688889887652 23333332 1 1688899998766666
Q ss_pred EEecCCeeEEEEEeCCC-Cceeeecccccce---------------eeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 366 SYLSDVKYVLQIRDLKN-GSLLHQLPIEIGS---------------VNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 366 ~~~~~g~~~l~~~d~~~-g~~~~~l~~~~g~---------------v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.... ..|.+||+.+ ++.+..+..+... +..+.++++++.++ +.+ .-..++.||+.++
T Consensus 302 ~~~~---~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~-s~s---~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 302 TRDY---LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVM-TGS---YNNFFRMFDRNTK 374 (447)
T ss_dssp EEES---SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEE-EEC---STTEEEEEETTTC
T ss_pred EeeC---CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEE-Eec---cCCEEEEEEcCCC
Confidence 6555 4799999975 6554445433211 11267889988663 333 2368999999988
Q ss_pred C
Q 004766 430 T 430 (732)
Q Consensus 430 ~ 430 (732)
+
T Consensus 375 ~ 375 (447)
T 3dw8_B 375 R 375 (447)
T ss_dssp C
T ss_pred c
Confidence 5
No 332
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.99 E-value=7.7e-08 Score=111.05 Aligned_cols=242 Identities=11% Similarity=0.043 Sum_probs=150.7
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee-----c-ccccceeeeeEEEEeCCcEEEEEEecCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE-----A-DALSWFKFSSIAWTHDSKGFFYSRYPAPKEG 203 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~-----~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~ 203 (732)
+.-.+..++|+|++..++++.+.+ .+|++||+.++... . ..........++|+|||+.|+..+.+
T Consensus 381 H~~~V~~v~~~~~~~~~l~s~s~D----~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D----- 451 (694)
T 3dm0_A 381 HTDMVTAIATPIDNADIIVSASRD----KSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD----- 451 (694)
T ss_dssp CSSCEEEEECCTTCCSEEEEEETT----SEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----
T ss_pred CCceeEEEEecCCCCCEEEEEeCC----CcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC-----
Confidence 344577889999875444444333 48999999764311 1 11111124789999999988876533
Q ss_pred CCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCc
Q 004766 204 KDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGL 283 (732)
Q Consensus 204 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 283 (732)
..|.+|++.++... ..+.. +...+.+++|||||++|+..+.++. |.++|+.+..
T Consensus 452 --------------g~v~vwd~~~~~~~--~~~~~--h~~~v~~~~~s~~~~~l~s~s~D~~-----i~iwd~~~~~--- 505 (694)
T 3dm0_A 452 --------------GELRLWDLAAGVST--RRFVG--HTKDVLSVAFSLDNRQIVSASRDRT-----IKLWNTLGEC--- 505 (694)
T ss_dssp --------------SEEEEEETTTTEEE--EEEEC--CSSCEEEEEECTTSSCEEEEETTSC-----EEEECTTSCE---
T ss_pred --------------CcEEEEECCCCcce--eEEeC--CCCCEEEEEEeCCCCEEEEEeCCCE-----EEEEECCCCc---
Confidence 36899999775322 22222 3345678999999999876654433 6777765421
Q ss_pred ccccccCCCCCcEEeee---cccc--eEEEEEecCCe-EEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEE
Q 004766 284 EGFKKRDGLLPFVKLID---GFDA--QYEVIANDDTV-FTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATA 357 (732)
Q Consensus 284 ~~~~~~~~~~~~~~l~~---~~~~--~~~~~s~dg~~-l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~ 357 (732)
...+.. +... ....|+|++.. +++.... ...|..+|+.+......+..+. ..+..+.+
T Consensus 506 -----------~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~---d~~v~vwd~~~~~~~~~~~~h~--~~v~~v~~ 569 (694)
T 3dm0_A 506 -----------KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW---DKTVKVWNLSNCKLRSTLAGHT--GYVSTVAV 569 (694)
T ss_dssp -----------EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET---TSCEEEEETTTCCEEEEECCCS--SCEEEEEE
T ss_pred -----------ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC---CCeEEEEECCCCcEEEEEcCCC--CCEEEEEE
Confidence 111111 1111 12247887642 3333332 2358888988776344454444 56888999
Q ss_pred ecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 358 VNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 358 ~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
++++.++++...++ .|++||+.+++.+..+.. ...+..+.+++++..+... +. ..+..+|+.+++
T Consensus 570 spdg~~l~sg~~Dg--~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~-~~----~~i~iwd~~~~~ 634 (694)
T 3dm0_A 570 SPDGSLCASGGKDG--VVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAA-TE----HGIKIWDLESKS 634 (694)
T ss_dssp CTTSSEEEEEETTS--BCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEE-ET----TEEEEEETTTTE
T ss_pred eCCCCEEEEEeCCC--eEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEE-cC----CCEEEEECCCCC
Confidence 98777888888875 688999988876555543 3456778888888654432 22 358999998774
No 333
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.99 E-value=3.4e-07 Score=94.89 Aligned_cols=243 Identities=12% Similarity=0.043 Sum_probs=144.3
Q ss_pred CCCEEEEeEEECCCC-cEEEEEEeccCCceEEEEEEECCCCceec----ccc--cceeeeeEEEEeCCcEEEEEEecCCC
Q 004766 129 DGTAALIKVSVSEDA-KYLAYALSYSGSDWATIKLMRIEDQIVEA----DAL--SWFKFSSIAWTHDSKGFFYSRYPAPK 201 (732)
Q Consensus 129 ~~~~~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~~g~~~~----~~~--~~~~~~~~~WspDg~~l~y~~~~~~~ 201 (732)
++.-.+..++||||+ ++|| +.+.+ .+|+|||+.+++... ... .......++|+|||+.|+....+
T Consensus 36 GH~~~V~~v~~sp~~~~~l~-S~s~D----~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d--- 107 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMIL-SASRD----KTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD--- 107 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEE-EEETT----SCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT---
T ss_pred CccCCEEEEEEeCCCCCEEE-EEcCC----CeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc---
Confidence 344567899999984 6665 33222 479999998765211 111 11234789999999988876533
Q ss_pred CCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCC
Q 004766 202 EGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPE 281 (732)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 281 (732)
..|+.++....... ..... .........+++++++|+..+.++ .+.++|+....
T Consensus 108 ----------------~~i~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~l~s~s~d~-----~~~~~d~~~~~- 161 (340)
T 4aow_A 108 ----------------GTLRLWDLTTGTTT--RRFVG--HTKDVLSVAFSSDNRQIVSGSRDK-----TIKLWNTLGVC- 161 (340)
T ss_dssp ----------------SEEEEEETTTTEEE--EEEEC--CSSCEEEEEECTTSSCEEEEETTS-----CEEEECTTSCE-
T ss_pred ----------------ccceEEeeccccee--eeecC--CCCceeEEEEeecCccceeecCCC-----eEEEEEeCCCc-
Confidence 35777877654321 12222 122345678899999987665433 26667765421
Q ss_pred CcccccccCCCCCcEEeeecccce--EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec
Q 004766 282 GLEGFKKRDGLLPFVKLIDGFDAQ--YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN 359 (732)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~~~~~--~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~ 359 (732)
............ ...+++++...++++.. ....|..+|+.++.....+..+. ..+..+.+++
T Consensus 162 ------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~--~d~~i~i~d~~~~~~~~~~~~h~--~~v~~~~~s~ 225 (340)
T 4aow_A 162 ------------KYTVQDESHSEWVSCVRFSPNSSNPIIVSCG--WDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVSP 225 (340)
T ss_dssp ------------EEEECSSSCSSCEEEEEECSCSSSCEEEEEE--TTSCEEEEETTTTEEEEEECCCS--SCEEEEEECT
T ss_pred ------------eEEEEeccccCcccceEEccCCCCcEEEEEc--CCCEEEEEECCCCceeeEecCCC--CcEEEEEECC
Confidence 011111111111 22466666544433321 13458888988776344444443 5688899998
Q ss_pred CCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 360 LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 360 ~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
++.++++...++ .|.+||+.+++.+..+.. ...+..+.+++++..+ .... -..+..+|+.++
T Consensus 226 ~~~~l~s~s~Dg--~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~-~~~~----d~~i~iwd~~~~ 287 (340)
T 4aow_A 226 DGSLCASGGKDG--QAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWL-CAAT----GPSIKIWDLEGK 287 (340)
T ss_dssp TSSEEEEEETTC--EEEEEETTTTEEEEEEEC-SSCEEEEEECSSSSEE-EEEE----TTEEEEEETTTT
T ss_pred CCCEEEEEeCCC--eEEEEEeccCceeeeecC-CceEEeeecCCCCcee-eccC----CCEEEEEECCCC
Confidence 777888887774 788999987776555543 3345667777776533 2222 257889998776
No 334
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.99 E-value=8.7e-08 Score=102.55 Aligned_cols=245 Identities=11% Similarity=0.037 Sum_probs=145.3
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCcee-c----ccccceeeeeEEEEe-CCcEEEEEEecCCCCCCCCCCC
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE-A----DALSWFKFSSIAWTH-DSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~-~----~~~~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~~~~~ 209 (732)
.+.++|+...+++... + ...|+|||+.....+ . ..........++|+| |++.|+....+
T Consensus 39 ~~~~~~~~~~~~~~~~--~--~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d----------- 103 (402)
T 2aq5_A 39 FCAVNPKFMALICEAS--G--GGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSED----------- 103 (402)
T ss_dssp SEEECSSEEEEEBCCS--S--SCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETT-----------
T ss_pred cEEECCCeEEEEEEEc--C--CCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCC-----------
Confidence 4678887654443322 2 247999999654322 1 111122357899999 88877776533
Q ss_pred CcccCCcccEEEEEECCCCCC-----CCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 210 TETDSNLYHEFYYHFLGTKQS-----EDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~-----~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
..|.+|++.++.. +.+..+.. +...+..+.|+|+|+.++++.... ..|.++|+.++.
T Consensus 104 --------g~v~vw~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~~~d----g~i~iwd~~~~~---- 165 (402)
T 2aq5_A 104 --------CTVMVWEIPDGGLVLPLREPVITLEG--HTKRVGIVAWHPTAQNVLLSAGCD----NVILVWDVGTGA---- 165 (402)
T ss_dssp --------SEEEEEECCTTCCSSCBCSCSEEEEC--CSSCEEEEEECSSBTTEEEEEETT----SCEEEEETTTTE----
T ss_pred --------CeEEEEEccCCCCccccCCceEEecC--CCCeEEEEEECcCCCCEEEEEcCC----CEEEEEECCCCC----
Confidence 3688899877532 22233332 234567899999995444443322 238888987642
Q ss_pred cccccCCCCCcEEee-ecccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEe-ccCCCCCceeEEEEecC
Q 004766 285 GFKKRDGLLPFVKLI-DGFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEV-IPEAERDVLESATAVNL 360 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~-~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l-~~~~~~~~l~~~~~~~~ 360 (732)
....+. ......+ ..|+|+|+.|+..+. ...|..+|+.++.....+ ..+. ...+..+.++++
T Consensus 166 ---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 231 (402)
T 2aq5_A 166 ---------AVLTLGPDVHPDTIYSVDWSRDGALICTSCR----DKRVRVIEPRKGTVVAEKDRPHE-GTRPVHAVFVSE 231 (402)
T ss_dssp ---------EEEEECTTTCCSCEEEEEECTTSSCEEEEET----TSEEEEEETTTTEEEEEEECSSC-SSSCCEEEECST
T ss_pred ---------ccEEEecCCCCCceEEEEECCCCCEEEEEec----CCcEEEEeCCCCceeeeeccCCC-CCcceEEEEcCC
Confidence 122221 1111122 258999988876554 347999999887633444 2333 334677888887
Q ss_pred CEEEEEEec-CCeeEEEEEeCCCCce-eeecccc-cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 361 NQMIVSYLS-DVKYVLQIRDLKNGSL-LHQLPIE-IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 361 ~~l~~~~~~-~g~~~l~~~d~~~g~~-~~~l~~~-~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+.+++.... .....|.+||+.+++. ......+ ...+..+.++++++.++++.+. -..+..||+.+++
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~---dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKG---DSSIRYFEITSEA 301 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETT---CSCEEEEEECSST
T ss_pred CcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcC---CCeEEEEEecCCC
Confidence 777766521 2236899999986553 2223322 3456677888999877655432 2468888887764
No 335
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.99 E-value=2.1e-08 Score=105.30 Aligned_cols=250 Identities=10% Similarity=0.024 Sum_probs=141.6
Q ss_pred EEEeEEECCC----CcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEe-CCcEEEEEEecCCCCCCCC
Q 004766 133 ALIKVSVSED----AKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTH-DSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 133 ~~~~~~~SPD----G~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~~ 206 (732)
.+..+.|||+ |++|+... . ...|++||+.+++.+.... .......++|+| |++.|+....+
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~-~----dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d-------- 137 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAG-S----RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD-------- 137 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEE-T----TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT--------
T ss_pred cEEEEEeccCCCCCCCEEEEec-C----CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC--------
Confidence 4678899999 66776553 2 2489999999988553221 222357899999 88877776533
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEec-CCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCC--c
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKD-PEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEG--L 283 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~--~ 283 (732)
..|++|++.++.. +..+.. ..+...+..+.|+|||++|+....++ .|.++|+.++... +
T Consensus 138 -----------g~i~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~ 199 (366)
T 3k26_A 138 -----------HALRLWNIQTDTL--VAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH-----SLKLWRINSKRMMNAI 199 (366)
T ss_dssp -----------SCEEEEETTTTEE--EEEECSTTSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESCSHHHHHHH
T ss_pred -----------CeEEEEEeecCeE--EEEecccccccCceeEEEECCCCCEEEEecCCC-----CEEEEECCCCcccccc
Confidence 3588999876531 222211 22344567899999999987765433 3788888753210 0
Q ss_pred c---cccccCCCCCc---------EEeeecccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCC----------
Q 004766 284 E---GFKKRDGLLPF---------VKLIDGFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND---------- 339 (732)
Q Consensus 284 ~---~~~~~~~~~~~---------~~l~~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~---------- 339 (732)
. .+.++...... ..........+ ..|+ ++.++..+. ...|..+|+.+...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~~~ 273 (366)
T 3k26_A 200 KESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSC----ENAIVCWKPGKMEDDIDKIKPSES 273 (366)
T ss_dssp HHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECS----SSEEEEEEESSTTCCGGGCCTTCC
T ss_pred ceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEec----CCEEEEEeCCCccccccccccCCc
Confidence 0 00000000000 00000011111 1244 565544332 34677788766531
Q ss_pred ----ceEeccCCCCCceeEEEEecC--CEEEEEEecCCeeEEEEEeCCCCceee----ecccc--cceeeEeecccCCcE
Q 004766 340 ----WFEVIPEAERDVLESATAVNL--NQMIVSYLSDVKYVLQIRDLKNGSLLH----QLPIE--IGSVNAISARREDSV 407 (732)
Q Consensus 340 ----~~~l~~~~~~~~l~~~~~~~~--~~l~~~~~~~g~~~l~~~d~~~g~~~~----~l~~~--~g~v~~~~~s~d~~~ 407 (732)
...+..+. ..+..+.++++ +.++++...++ .|++||+.+++... .+..+ .+.+..+.++++++.
T Consensus 274 ~~~~~~~~~~~~--~~v~~~~~s~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 349 (366)
T 3k26_A 274 NVTILGRFDYSQ--CDIWYMRFSMDFWQKMLALGNQVG--KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSI 349 (366)
T ss_dssp CEEEEEEEECSS--CCSSCCCCEECTTSSEEEEECTTS--CEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred chheeccccccC--CcEEEEEEcCCCCCcEEEEEecCC--cEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCe
Confidence 11121121 33555667765 67777777774 68999998775422 34433 467888899999886
Q ss_pred EEEEEecCCCCceEEEEECC
Q 004766 408 VFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 408 l~~~~ss~~~p~~~y~~d~~ 427 (732)
++.. +. -..++.||+.
T Consensus 350 l~s~-~~---dg~i~iwd~~ 365 (366)
T 3k26_A 350 LIAV-CD---DASIWRWDRL 365 (366)
T ss_dssp EEEE-ET---TSEEEEEEC-
T ss_pred EEEE-eC---CCEEEEEEec
Confidence 6533 22 2578888764
No 336
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=98.98 E-value=1.7e-09 Score=108.85 Aligned_cols=100 Identities=10% Similarity=0.010 Sum_probs=66.6
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
+..|.||++||+.+... .|.. +.. |. .||.|+.+|+||.+.. .....+++++.+.+..+++.- .
T Consensus 19 ~~~~~lv~lhg~~~~~~--~~~~-~~~-l~-~~~~v~~~d~~G~~~~----------~~~~~~~~~~~~~~~~~i~~~-~ 82 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAF--SYAS-LPR-LK-SDTAVVGLNCPYARDP----------ENMNCTHGAMIESFCNEIRRR-Q 82 (265)
T ss_dssp TSSEEEEEECCTTCCGG--GGTT-SCC-CS-SSEEEEEEECTTTTCG----------GGCCCCHHHHHHHHHHHHHHH-C
T ss_pred CCCCEEEEECCCCCCHH--HHHH-HHh-cC-CCCEEEEEECCCCCCC----------CCCCCCHHHHHHHHHHHHHHh-C
Confidence 56688999999977643 3333 223 55 8999999999995321 111234555554443333321 1
Q ss_pred CCCcEEEEecChhHHHHHHHHh---hCCCeeeEEEEcCC
Q 004766 559 QSRKLCIEGGSNGGLLVGACIN---QRPDLFGCALAHVG 594 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~---~~p~~f~a~v~~~p 594 (732)
..+++.++|||+||+++..++. .+|+..+.+|+..+
T Consensus 83 ~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~ 121 (265)
T 3ils_A 83 PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDA 121 (265)
T ss_dssp SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcC
Confidence 2258999999999999999887 67888888876654
No 337
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.98 E-value=5.3e-08 Score=101.19 Aligned_cols=210 Identities=11% Similarity=0.005 Sum_probs=115.8
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc---eecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI---VEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~---~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
...++|||||++|+++...+ ..|++||+..|. .+...........++|+|||+.|+++..
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------------- 148 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNA----GNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPAL------------- 148 (343)
T ss_dssp CSEEEECTTSSEEEEEETTT----TEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEG-------------
T ss_pred CcEEEEcCCCCEEEEEecCC----CeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecC-------------
Confidence 34788999999987775322 268899984332 2221111112467899999998877641
Q ss_pred cccCCcccEEEEEECCC-CCCCCeE--EEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 211 ETDSNLYHEFYYHFLGT-KQSEDIL--CWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt-~~~~~~~--v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
....|+++++.+ +...... ...... ......+.|+|||++|++.... ...+.++++......
T Consensus 149 -----~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pdg~~l~~~~~~----~~~i~~~~~~~~~g~----- 213 (343)
T 1ri6_A 149 -----KQDRICLFTVSDDGHLVAQDPAEVTTVE-GAGPRHMVFHPNEQYAYCVNEL----NSSVDVWELKDPHGN----- 213 (343)
T ss_dssp -----GGTEEEEEEECTTSCEEEEEEEEEECST-TCCEEEEEECTTSSEEEEEETT----TTEEEEEESSCTTSC-----
T ss_pred -----CCCEEEEEEecCCCceeeecccccccCC-CCCcceEEECCCCCEEEEEeCC----CCEEEEEEecCCCCc-----
Confidence 234688888875 3221111 222222 1234578999999998776532 245777787431100
Q ss_pred ccCCCCCcEEee---eccc----ceEEEEEecCCeEEEEeCCCCCCceEEEEeCC--CCCCceEe--ccCCCCCceeEEE
Q 004766 288 KRDGLLPFVKLI---DGFD----AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK--EPNDWFEV--IPEAERDVLESAT 356 (732)
Q Consensus 288 ~~~~~~~~~~l~---~~~~----~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~--~~~~~~~l--~~~~~~~~l~~~~ 356 (732)
........ .+.. .....|+|||+.|++.... ...|.+++++ ++. .+.+ ++.. ..+..+.
T Consensus 214 ----~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~---~~~i~v~d~~~~~~~-~~~~~~~~~~--~~~~~~~ 283 (343)
T 1ri6_A 214 ----IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT---ASLITVFSVSEDGSV-LSKEGFQPTE--TQPRGFN 283 (343)
T ss_dssp ----CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT---TTEEEEEEECTTSCC-EEEEEEEECS--SSCCCEE
T ss_pred ----EEEEeeccccCccccccCCccceEECCCCCEEEEEecC---CCEEEEEEEcCCCCc-eEEeeeecCC--CccceEE
Confidence 00011111 0100 1123589999988765432 2457777766 333 2222 2222 2266788
Q ss_pred EecCCE-EEEEEecCCeeEEEEEeCCCCce
Q 004766 357 AVNLNQ-MIVSYLSDVKYVLQIRDLKNGSL 385 (732)
Q Consensus 357 ~~~~~~-l~~~~~~~g~~~l~~~d~~~g~~ 385 (732)
+++++. +++....++.-.++.+|.++|+.
T Consensus 284 ~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 284 VDHSGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp ECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred ECCCCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 887654 55554455544555557766654
No 338
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=98.97 E-value=1.5e-09 Score=111.52 Aligned_cols=206 Identities=11% Similarity=-0.083 Sum_probs=118.7
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHH-HHHHcC
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASE-YLISAG 556 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~ 556 (732)
.+..|.||++||..+......|.. +...|. .+|.|+.+|+||.|.... ...+++++.+.+. .+.+.
T Consensus 64 ~~~~~~lvllhG~~~~~~~~~~~~-~~~~l~-~~~~v~~~d~~G~G~s~~----------~~~~~~~~a~~~~~~l~~~- 130 (300)
T 1kez_A 64 GPGEVTVICCAGTAAISGPHEFTR-LAGALR-GIAPVRAVPQPGYEEGEP----------LPSSMAAVAAVQADAVIRT- 130 (300)
T ss_dssp CSCSSEEEECCCSSTTCSTTTTHH-HHHHTS-SSCCBCCCCCTTSSTTCC----------BCSSHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEECCCcccCcHHHHHH-HHHhcC-CCceEEEecCCCCCCCCC----------CCCCHHHHHHHHHHHHHHh-
Confidence 356789999999876542234443 445566 679999999999775211 1235566665544 44443
Q ss_pred CCCCCcEEEEecChhHHHHHHHHhhCC---CeeeEEEEcCCcccccc-ccc-C--CCCCccccccCCCCCHHHHHHHHh-
Q 004766 557 YTQSRKLCIEGGSNGGLLVGACINQRP---DLFGCALAHVGVMDMLR-YHK-F--TIGHAWVSDFGCSEEEEEFYWLIK- 628 (732)
Q Consensus 557 ~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~p~~d~~~-~~~-~--~~~~~~~~~~g~p~~~~~~~~~~~- 628 (732)
.+.+++.++|+|+||.++..++.++| +.++++|+..+...... ... + .....+......+........+..
T Consensus 131 -~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (300)
T 1kez_A 131 -QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALGAY 209 (300)
T ss_dssp -CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHHHHHHHH
T ss_pred -cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHHHHHHHH
Confidence 23468999999999999999999988 48899988777543211 000 0 000000000001111111111111
Q ss_pred ---cCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCC
Q 004766 629 ---YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVG 705 (732)
Q Consensus 629 ---~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 705 (732)
...+ ... .+..|+|+++| .|+.+++.+ .. +... -...+.++++++ ||...
T Consensus 210 ~~~~~~~-~~~----------~i~~P~lii~G-~d~~~~~~~-~~----~~~~---------~~~~~~~~~i~g-gH~~~ 262 (300)
T 1kez_A 210 DRLTGQW-RPR----------ETGLPTLLVSA-GEPMGPWPD-DS----WKPT---------WPFEHDTVAVPG-DHFTM 262 (300)
T ss_dssp HHHTTTC-CCC----------CCSCCBEEEEE-SSCSSCCCS-SC----CSCC---------CSSCCEEEEESS-CTTTS
T ss_pred HHHHhcC-CCC----------CCCCCEEEEEe-CCCCCCCcc-cc----hhhh---------cCCCCeEEEecC-CChhh
Confidence 1111 112 37889999999 577787765 22 2221 123468889999 99875
Q ss_pred C-chHHHHHHHHHHHHHHHHHh
Q 004766 706 L-PTQKMIDEAADRYGFMAKML 726 (732)
Q Consensus 706 ~-~~~~~~~~~~~~~~fl~~~l 726 (732)
. ... ....+.+.+||.+..
T Consensus 263 ~~e~~--~~~~~~i~~fl~~~~ 282 (300)
T 1kez_A 263 VQEHA--DAIARHIDAWLGGGN 282 (300)
T ss_dssp SSSCS--HHHHHHHHHHHTCC-
T ss_pred ccccH--HHHHHHHHHHHHhcc
Confidence 3 322 245556778886543
No 339
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.97 E-value=8.3e-08 Score=99.78 Aligned_cols=246 Identities=13% Similarity=0.037 Sum_probs=129.1
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc-------eecc-cccceeeeeEEEEeCCcEEEEEEecCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI-------VEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKE 202 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~-------~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~ 202 (732)
...+..++|||||++||-... ..+|++||++++. .+.. .........++|+|||+.|+....+
T Consensus 58 ~~~v~~v~~sp~~~~las~s~-----D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D---- 128 (330)
T 2hes_X 58 KKAIRSVAWRPHTSLLAAGSF-----DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD---- 128 (330)
T ss_dssp CSCEEEEEECTTSSEEEEEET-----TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT----
T ss_pred cCCEEEEEECCCCCEEEEEeC-----CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC----
Confidence 345788999999998885532 2478999986432 1111 1111124789999999988877543
Q ss_pred CCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCC
Q 004766 203 GKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEG 282 (732)
Q Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 282 (732)
..|++|++........++.....+...+..+.|+|||++|+..+.++. |.+++..++.
T Consensus 129 ---------------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-----i~iW~~~~~~-- 186 (330)
T 2hes_X 129 ---------------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDT-----VRIWKDYDDD-- 186 (330)
T ss_dssp ---------------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSC-----EEEEEEETTE--
T ss_pred ---------------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCe-----EEEEECCCCC--
Confidence 358888885432222233222233445678999999999876654433 5555654321
Q ss_pred cccccccCCCCCcEEeeecccceE-EEEEec--CCeEEEEeCCCCCCceEEEEeCCCCC-----Cce--EeccCCCCCce
Q 004766 283 LEGFKKRDGLLPFVKLIDGFDAQY-EVIAND--DTVFTFLTNKDAPKYKIIRVDLKEPN-----DWF--EVIPEAERDVL 352 (732)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~d--g~~l~~~s~~~~~~~~l~~~d~~~~~-----~~~--~l~~~~~~~~l 352 (732)
..+...+........ ..|+|+ +..|+..+. + ..|..+++.++. .+. ..++......+
T Consensus 187 ---------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~-D---~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (330)
T 2hes_X 187 ---------WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSD-D---STVRVWKYMGDDEDDQQEWVCEAILPDVHKRQV 253 (330)
T ss_dssp ---------EEEEEEECCCSSCEEEEEECCSSSSCEEEEEET-T---SCEEEEEEEEECTTSCEEEEEEEECCSCCSSCE
T ss_pred ---------eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeC-C---CeEEEEEecCCCccccceeEEeeecccccccce
Confidence 011222222211222 247887 334443332 2 234445543321 111 12222123567
Q ss_pred eEEEEecCCEEEEEEecCCeeEEEEEeCCCCce--eeec-ccccc-eeeEeeccc--CCcEEEEEEecCCCCceEEEEEC
Q 004766 353 ESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL--LHQL-PIEIG-SVNAISARR--EDSVVFISFTSFLIPGIVYQCNL 426 (732)
Q Consensus 353 ~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~--~~~l-~~~~g-~v~~~~~s~--d~~~l~~~~ss~~~p~~~y~~d~ 426 (732)
..+.+++ +.++++...++ .|.+|+..+++. .... ..+.. .+..+.+++ ++. ++++.+.. ..+..+|+
T Consensus 254 ~~v~~s~-~~~l~s~~~dg--~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~-~las~s~D---g~v~~W~~ 326 (330)
T 2hes_X 254 YNVAWGF-NGLIASVGADG--VLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKT-ILATGGDD---GIVNFWSL 326 (330)
T ss_dssp EEEEECT-TSCEEEEETTS--CEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----C-CEEEEETT---SEEEEEEC
T ss_pred EEEEEcC-CCEEEEEeCCC--EEEEEEcCCCceEEEeccccccccceEEEEEEecCCCce-EEEEecCC---CcEEEEEe
Confidence 8888886 44666777775 677788766642 1111 22233 577777777 454 33444432 46777776
Q ss_pred C
Q 004766 427 K 427 (732)
Q Consensus 427 ~ 427 (732)
.
T Consensus 327 ~ 327 (330)
T 2hes_X 327 E 327 (330)
T ss_dssp -
T ss_pred c
Confidence 4
No 340
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.97 E-value=1.5e-07 Score=98.74 Aligned_cols=239 Identities=10% Similarity=0.037 Sum_probs=138.1
Q ss_pred CCEEEEeEEECCC---CcEEEEEEeccCCceEEEEEEECCC-Cceecccc--cceeeeeEEEEeCCcEEEEEEecCCCCC
Q 004766 130 GTAALIKVSVSED---AKYLAYALSYSGSDWATIKLMRIED-QIVEADAL--SWFKFSSIAWTHDSKGFFYSRYPAPKEG 203 (732)
Q Consensus 130 ~~~~~~~~~~SPD---G~~la~~~~~~G~e~~~i~v~dl~~-g~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~ 203 (732)
+...+..++|||| |++|+.... + ..|++||+.+ +..+.... .......++|+||++.|+....+
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~-d----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----- 107 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSW-A----NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD----- 107 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEET-T----SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----
T ss_pred CCCceEEEEEcCCCCCceEEEEECC-C----CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-----
Confidence 3345789999999 688876532 2 4799999987 55432111 22235789999999998876533
Q ss_pred CCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEE--ecCCcEEEEEEecCCcceEEEEEEeCCCCCC
Q 004766 204 KDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHV--TEDGQYLVMCIEENCDPVNKVYYCDLSALPE 281 (732)
Q Consensus 204 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~--SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 281 (732)
..|.+|++.++... .+.. +...+..+.| +|+|++|+....+ ..|.++|+.++..
T Consensus 108 --------------g~v~iwd~~~~~~~--~~~~---~~~~v~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~ 163 (368)
T 3mmy_A 108 --------------KTAKMWDLSSNQAI--QIAQ---HDAPVKTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSNP 163 (368)
T ss_dssp --------------SEEEEEETTTTEEE--EEEE---CSSCEEEEEEEECSSCEEEEEEETT-----SEEEEECSSCSSC
T ss_pred --------------CcEEEEEcCCCCce--eecc---ccCceEEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCcE
Confidence 36889998765421 2222 2234567888 9999988766543 3478888876431
Q ss_pred CcccccccCCCCCcEEe--------eecccceE-------------------------EEEEecCCe----EEEEeCCCC
Q 004766 282 GLEGFKKRDGLLPFVKL--------IDGFDAQY-------------------------EVIANDDTV----FTFLTNKDA 324 (732)
Q Consensus 282 ~~~~~~~~~~~~~~~~l--------~~~~~~~~-------------------------~~~s~dg~~----l~~~s~~~~ 324 (732)
. ..+.. ......+ ....+... ..+.+++.. ++..+.
T Consensus 164 ~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 236 (368)
T 3mmy_A 164 M-MVLQL---PERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI--- 236 (368)
T ss_dssp S-EEEEC---SSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEET---
T ss_pred E-EEEec---CCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecC---
Confidence 1 00000 0000000 00000000 011111111 222221
Q ss_pred CCceEEEEeCCCCC---CceEeccCCCC----------CceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeeccc
Q 004766 325 PKYKIIRVDLKEPN---DWFEVIPEAER----------DVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI 391 (732)
Q Consensus 325 ~~~~l~~~d~~~~~---~~~~l~~~~~~----------~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~ 391 (732)
...|..+++.... ....+..+... ..+..+.+++++.++++...++ .|++||+.+++.+..+..
T Consensus 237 -dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 237 -EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG--RFSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp -TSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS--CEEEEETTTTEEEEECCC
T ss_pred -CCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC--eEEEEECCCCcEEEEecC
Confidence 3456677776542 12223222210 1478889998777777777774 689999998887677765
Q ss_pred ccceeeEeecccCCcEEEEEE
Q 004766 392 EIGSVNAISARREDSVVFISF 412 (732)
Q Consensus 392 ~~g~v~~~~~s~d~~~l~~~~ 412 (732)
+.+.+..+.+++++..++...
T Consensus 314 ~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 314 LDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp CSSCEEEEEECTTSSCEEEEE
T ss_pred CCCCceEEEECCCCCeEEEEe
Confidence 567788899999998766443
No 341
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.96 E-value=7.1e-07 Score=96.09 Aligned_cols=253 Identities=12% Similarity=0.031 Sum_probs=150.8
Q ss_pred eEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc---cccceeeeeEEEEeCCcEEEE
Q 004766 118 KVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD---ALSWFKFSSIAWTHDSKGFFY 194 (732)
Q Consensus 118 ~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~---~~~~~~~~~~~WspDg~~l~y 194 (732)
..+||.-.+..+ +.+.-+.||+++ .||...+ .+|+|||+.+|+.+.. ......+..++|+|||+.|+.
T Consensus 94 ~~~l~ap~~~~d--~y~~~l~wS~~n-~lAvgld------~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~las 164 (420)
T 4gga_A 94 DRILDAPEIRND--YYLNLVDWSSGN-VLAVALD------NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV 164 (420)
T ss_dssp SEEEECTTCCCC--TTCBCEEECTTS-EEEEEET------TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE
T ss_pred ceEEECCCCccc--ccceeEEECCCC-EEEEEeC------CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEE
Confidence 445665444322 334568899865 7887752 2799999999985432 112223578999999999988
Q ss_pred EEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEE
Q 004766 195 SRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYC 274 (732)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~ 274 (732)
...+. .|.+|++.++. .+.....+.... .+++.+++.|+..+.+ ..++++
T Consensus 165 gs~Dg-------------------~v~iWd~~~~~----~~~~~~~h~~~v--~~~s~~~~~l~sgs~d-----~~i~~~ 214 (420)
T 4gga_A 165 GTSSA-------------------EVQLWDVQQQK----RLRNMTSHSARV--GSLSWNSYILSSGSRS-----GHIHHH 214 (420)
T ss_dssp EETTS-------------------CEEEEETTTTE----EEEEECCCSSCE--EEEEEETTEEEEEETT-----SEEEEE
T ss_pred EECCC-------------------eEEEEEcCCCc----EEEEEeCCCCce--EEEeeCCCEEEEEeCC-----CceeEe
Confidence 75433 58889987653 232222233333 3456678877654432 346777
Q ss_pred eCCCCCCCcccccccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC----CceEeccCCCC
Q 004766 275 DLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN----DWFEVIPEAER 349 (732)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~----~~~~l~~~~~~ 349 (732)
+..... .....+....... ...++++|+.++...+. ..+..++..++. .......+ .
T Consensus 215 d~~~~~------------~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D----~~v~i~~~~~~~~~~~~~~~~~~~--~ 276 (420)
T 4gga_A 215 DVRVAE------------HHVATLSGHSQEVCGLRWAPDGRHLASGGND----NLVNVWPSAPGEGGWVPLQTFTQH--Q 276 (420)
T ss_dssp ETTSSS------------CEEEEEECCSSCEEEEEECTTSSEEEEEETT----SCEEEEESSCCSSCSCCSEEECCC--S
T ss_pred eecccc------------eeeEEecccccceeeeeecCCCCeeeeeecc----ccceEEeeccccccceeeeeeccc--C
Confidence 766521 1122222222222 22478888887765553 357777776653 12223223 3
Q ss_pred CceeEEEEecC-CEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 350 DVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 350 ~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
..+..+.+.+. ..+++.........|.+||+.+|+....+..+ ..+..+.++++++.++....+ .-..++.+|..+
T Consensus 277 ~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~--~d~~I~iwd~~~ 353 (420)
T 4gga_A 277 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGF--AQNQLVIWKYPT 353 (420)
T ss_dssp SCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECT--TTCCEEEEETTT
T ss_pred CceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEec--CCCEEEEEECCC
Confidence 55777888763 45555543222257999999988875555543 344566678888877654322 235788999888
Q ss_pred CC
Q 004766 429 ET 430 (732)
Q Consensus 429 ~~ 430 (732)
++
T Consensus 354 ~~ 355 (420)
T 4gga_A 354 MA 355 (420)
T ss_dssp CC
T ss_pred Cc
Confidence 75
No 342
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=98.96 E-value=8.7e-09 Score=106.64 Aligned_cols=208 Identities=7% Similarity=-0.116 Sum_probs=116.0
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHH-HHHHcCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASE-YLISAGY 557 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~ 557 (732)
+..|.||++||.........|.. +...|. .||.|+.+|+||.|... ....+++++.+.+. .+.+.
T Consensus 79 ~~~~~lv~lhG~~~~~~~~~~~~-~~~~L~-~~~~v~~~d~~G~G~~~----------~~~~~~~~~~~~~~~~l~~~-- 144 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQVYSR-LAEELD-AGRRVSALVPPGFHGGQ----------ALPATLTVLVRSLADVVQAE-- 144 (319)
T ss_dssp CSSCEEEEECCSSTTCSGGGGHH-HHHHHC-TTSEEEEEECTTSSTTC----------CEESSHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEECCCCcCCCHHHHHH-HHHHhC-CCceEEEeeCCCCCCCC----------CCCCCHHHHHHHHHHHHHHh--
Confidence 56789999999422111234443 445565 89999999999977421 11223444443322 22222
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhC---CCeeeEEEEcCCcccccc--ccc-C--CCCCcccc---ccCCCC-CHHHHHH
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQR---PDLFGCALAHVGVMDMLR--YHK-F--TIGHAWVS---DFGCSE-EEEEFYW 625 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~---p~~f~a~v~~~p~~d~~~--~~~-~--~~~~~~~~---~~g~p~-~~~~~~~ 625 (732)
...+++.++|+|+||.++..++.+. |+.++++|+..+...... ... + ........ .+.... .......
T Consensus 145 ~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 224 (319)
T 3lcr_A 145 VADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRITA 224 (319)
T ss_dssp HTTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHHH
Confidence 1225899999999999999998876 888888887655432111 000 0 00000000 011111 0111111
Q ss_pred HHh----cCcccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCC
Q 004766 626 LIK----YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAG 701 (732)
Q Consensus 626 ~~~----~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 701 (732)
+.. +.-+ ... .+..|+|+++|.+ +.+++.....+.+.+.. .+.++++++ +
T Consensus 225 ~~~~~~~~~~~-~~~----------~i~~PvLli~g~~-~~~~~~~~~~~~~~~~~-------------~~~~~~~~g-~ 278 (319)
T 3lcr_A 225 QVWCLELLRGW-RPE----------GLTAPTLYVRPAQ-PLVEQEKPEWRGDVLAA-------------MGQVVEAPG-D 278 (319)
T ss_dssp HHHHHHHTTTC-CCC----------CCSSCEEEEEESS-CSSSCCCTHHHHHHHHT-------------CSEEEEESS-C
T ss_pred HHHHHHHHhcC-CCC----------CcCCCEEEEEeCC-CCCCcccchhhhhcCCC-------------CceEEEeCC-C
Confidence 111 1111 111 3789999999987 67787777777766653 256777776 6
Q ss_pred CCCCCc-hHHHHHHHHHHHHHHHHHhC
Q 004766 702 HGVGLP-TQKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 702 H~~~~~-~~~~~~~~~~~~~fl~~~l~ 727 (732)
|..... .. ..+..+.+.+||.+...
T Consensus 279 H~~~~~~~~-~~~va~~i~~fL~~~~~ 304 (319)
T 3lcr_A 279 HFTIIEGEH-VASTAHIVGDWLREAHA 304 (319)
T ss_dssp TTGGGSTTT-HHHHHHHHHHHHHHHHC
T ss_pred cHHhhCccc-HHHHHHHHHHHHHhccc
Confidence 654332 22 24566678889987653
No 343
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.95 E-value=2.2e-06 Score=95.37 Aligned_cols=248 Identities=13% Similarity=0.114 Sum_probs=139.9
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECC--CCceecccccceeeeeEEEE----eCCcEEEEEEecCCCCCCCCCC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIE--DQIVEADALSWFKFSSIAWT----HDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~--~g~~~~~~~~~~~~~~~~Ws----pDg~~l~y~~~~~~~~~~~~~~ 208 (732)
..+.+||||++|..+ +.. ..|.++|+. +++.+.....+....++++| |||++++.+..
T Consensus 200 ~~v~~SpDGr~lyv~-~~d----g~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~----------- 263 (567)
T 1qks_A 200 HISRLSASGRYLFVI-GRD----GKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAY----------- 263 (567)
T ss_dssp EEEEECTTSCEEEEE-ETT----SEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE-----------
T ss_pred cceEECCCCCEEEEE-cCC----CeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEc-----------
Confidence 478999999986544 332 279999996 77654332222234688999 79999988753
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEec--CC------CCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCC
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKD--PE------HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALP 280 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~--~~------~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~ 280 (732)
.+..|.+++..+.+....+-... .+ ++ ....+..|+++...++.... ...|+++|..+..
T Consensus 264 -------~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~-rva~i~~s~~~~~~vv~~~~----~g~v~~vd~~~~~ 331 (567)
T 1qks_A 264 -------WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEP-RVAAILASHYRPEFIVNVKE----TGKILLVDYTDLN 331 (567)
T ss_dssp -------ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCC-CEEEEEECSSSSEEEEEETT----TTEEEEEETTCSS
T ss_pred -------cCCeEEEEECCCCcEEEEEeccccccccccccCCC-ceEEEEEcCCCCEEEEEecC----CCeEEEEecCCCc
Confidence 23456777766543211111000 00 11 23467778988776655422 3579999987521
Q ss_pred CCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccC-CC-CCceeEEEE-
Q 004766 281 EGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPE-AE-RDVLESATA- 357 (732)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~-~~-~~~l~~~~~- 357 (732)
......+..+....-..|+|||+++++..+. ..+|..+|+++++ ....++- .. .+.-.+..+
T Consensus 332 -----------~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~---sn~V~ViD~~t~k-l~~~i~vgg~~Phpg~g~~~~ 396 (567)
T 1qks_A 332 -----------NLKTTEISAERFLHDGGLDGSHRYFITAANA---RNKLVVIDTKEGK-LVAIEDTGGQTPHPGRGANFV 396 (567)
T ss_dssp -----------EEEEEEEECCSSEEEEEECTTSCEEEEEEGG---GTEEEEEETTTTE-EEEEEECSSSSBCCTTCEEEE
T ss_pred -----------cceeeeeeccccccCceECCCCCEEEEEeCC---CCeEEEEECCCCc-EEEEEeccCcCCCCccceeeE
Confidence 0001111111111112489999988776543 3479999999876 2323332 11 011123333
Q ss_pred ecC-CEEEEEEecCCeeEEEEEeCCCC-------ceeeecccc-cceeeEeecccCCcEEEEEEecCCCC-----ceEEE
Q 004766 358 VNL-NQMIVSYLSDVKYVLQIRDLKNG-------SLLHQLPIE-IGSVNAISARREDSVVFISFTSFLIP-----GIVYQ 423 (732)
Q Consensus 358 ~~~-~~l~~~~~~~g~~~l~~~d~~~g-------~~~~~l~~~-~g~v~~~~~s~d~~~l~~~~ss~~~p-----~~~y~ 423 (732)
.++ +.++++ ..-+...|.++|.+++ +.++.|... .+.+ .+..+|+++.+|+.. ...| .++..
T Consensus 397 ~p~~g~v~~t-~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~-~i~~~p~~~~l~v~~--~~~~~~~~~~~v~v 472 (567)
T 1qks_A 397 HPTFGPVWAT-SHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSL-FIKTHPNSQYLYVDA--TLNPEAEISGSVAV 472 (567)
T ss_dssp ETTTEEEEEE-EBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCC-CEECCTTCSEEEEEC--TTCSSHHHHTCEEE
T ss_pred CCCCCcEEEe-CCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCE-EEEeCCCCCeEEEec--CCCCCcccCceEEE
Confidence 443 445444 3334457999998763 344555543 3333 456789999888653 2333 48889
Q ss_pred EECCCC
Q 004766 424 CNLKTE 429 (732)
Q Consensus 424 ~d~~~~ 429 (732)
+|..+.
T Consensus 473 ~d~~~~ 478 (567)
T 1qks_A 473 FDIKAM 478 (567)
T ss_dssp EEGGGC
T ss_pred EECCcc
Confidence 998755
No 344
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.94 E-value=1.1e-07 Score=99.71 Aligned_cols=243 Identities=12% Similarity=0.033 Sum_probs=141.4
Q ss_pred CEEEEeEEECCC---CcEEEEEEeccCCceEEEEEEECCCCceecccc------cceeeeeEEEEeC----CcEEEEEEe
Q 004766 131 TAALIKVSVSED---AKYLAYALSYSGSDWATIKLMRIEDQIVEADAL------SWFKFSSIAWTHD----SKGFFYSRY 197 (732)
Q Consensus 131 ~~~~~~~~~SPD---G~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~------~~~~~~~~~WspD----g~~l~y~~~ 197 (732)
...+..++|||+ |..++++....| .|++||+.+++.+.... ....+..++|+|| |+.|+....
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~----~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSN----RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETT----EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred CCceEEEEEecccCCCCceEEEECCCC----EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 345778999985 665555543332 69999999776432111 1123578999999 556665542
Q ss_pred cCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec-CCcEEEEEEecCCcceEEEEEEeC
Q 004766 198 PAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDL 276 (732)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~ 276 (732)
...|.+|++.++.. +..+.. +...+..+.|+| ++++|+....++ .|.++|+
T Consensus 94 -------------------dg~i~v~d~~~~~~--~~~~~~--~~~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~ 145 (366)
T 3k26_A 94 -------------------RGIIRIINPITMQC--IKHYVG--HGNAINELKFHPRDPNLLLSVSKDH-----ALRLWNI 145 (366)
T ss_dssp -------------------TCEEEEECTTTCCE--EEEEES--CCSCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred -------------------CCEEEEEEchhceE--eeeecC--CCCcEEEEEECCCCCCEEEEEeCCC-----eEEEEEe
Confidence 23688999876532 223332 334567899999 888887665433 3888898
Q ss_pred CCCCCCcccccccCCCCCcEEee--ecccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEecc-------
Q 004766 277 SALPEGLEGFKKRDGLLPFVKLI--DGFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIP------- 345 (732)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~------- 345 (732)
.++. ....+. ......+ ..|+|+++.|+..+.. ..|..+|+.++.....+..
T Consensus 146 ~~~~-------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~ 208 (366)
T 3k26_A 146 QTDT-------------LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD----HSLKLWRINSKRMMNAIKESYDYNPN 208 (366)
T ss_dssp TTTE-------------EEEEECSTTSCSSCEEEEEECTTSSEEEEEETT----SCEEEEESCSHHHHHHHHHHHTCCGG
T ss_pred ecCe-------------EEEEecccccccCceeEEEECCCCCEEEEecCC----CCEEEEECCCCccccccceeEEecCC
Confidence 7642 112221 1111222 2488998877765442 3688888876531110000
Q ss_pred -------------------CCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCce--------------eeecccc
Q 004766 346 -------------------EAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL--------------LHQLPIE 392 (732)
Q Consensus 346 -------------------~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~--------------~~~l~~~ 392 (732)
......+..+.+.+ + ++++...++ .|.+||+.+++. +..+..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (366)
T 3k26_A 209 KTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLG-D-LILSKSCEN--AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYS 284 (366)
T ss_dssp GCSSCCCCEEECCCSEEECSSCSSCCCEEEEET-T-EEEEECSSS--EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECS
T ss_pred CCcccccceeeccCccccccCCcceEEEEEEcC-C-EEEEEecCC--EEEEEeCCCccccccccccCCcchheecccccc
Confidence 00124567777774 4 555555553 688899876543 1222223
Q ss_pred cceeeEeecccC--CcEEEEEEecCCCCceEEEEECCCCC
Q 004766 393 IGSVNAISARRE--DSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 393 ~g~v~~~~~s~d--~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
...+..+.++++ +..++.. + .-..++.||+.+++
T Consensus 285 ~~~v~~~~~s~~~~~~~l~~~-~---~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 285 QCDIWYMRFSMDFWQKMLALG-N---QVGKLYVWDLEVED 320 (366)
T ss_dssp SCCSSCCCCEECTTSSEEEEE-C---TTSCEEEEECCSSS
T ss_pred CCcEEEEEEcCCCCCcEEEEE-e---cCCcEEEEECCCCC
Confidence 344556667777 7755533 2 23578899988764
No 345
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.94 E-value=1e-09 Score=121.84 Aligned_cols=125 Identities=14% Similarity=0.097 Sum_probs=84.7
Q ss_pred EEEEEEEc-----CCCCCCCC----ccEEEEEcCCCCc---cCCCCcChhHHHHHHhcCcEEEEEcccCCC-CCchhHHh
Q 004766 465 IPMFIVSK-----KNIKLDGS----HPCLLYGYGGFNI---SVTPSFSVSRTILMRHLGAVFCIANIRGGG-EYGEEWHK 531 (732)
Q Consensus 465 i~~~~~~p-----~~~~~~~~----~P~vv~~hG~~~~---~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g-~~g~~~~~ 531 (732)
+.+.++.| +.. ..++ .|+||++|||... .....+.. ..|+++|++|+.+|||.+. +|...
T Consensus 91 L~lnv~~P~~~~~~~~-~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~---~~l~~~g~vvv~~nYRl~~~Gf~~~--- 163 (551)
T 2fj0_A 91 IHANIHVPYYALPRDA-ADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGP---EYLVSKDVIVITFNYRLNVYGFLSL--- 163 (551)
T ss_dssp CEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTTCBC---TTGGGGSCEEEEECCCCHHHHHCCC---
T ss_pred eEEEEEecCccccccc-cccCcCCCCCEEEEEcCCccccCCCcccccCH---HHHHhCCeEEEEeCCcCCccccccC---
Confidence 55666677 322 2234 8999999998532 22222332 2344599999999999642 11110
Q ss_pred cccccCCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhh--CCCeeeEEEEcCCcc
Q 004766 532 GGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGVM 596 (732)
Q Consensus 532 ~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p~~ 596 (732)
......+...+.|++++++|+.++- -.||+||.|+|+|+||.+++.++.. .+.+|+++|+.+|..
T Consensus 164 ~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 164 NSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp SSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred cccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 0001223456899999999998762 2599999999999999999988875 467999999999864
No 346
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.94 E-value=4.4e-07 Score=95.82 Aligned_cols=266 Identities=9% Similarity=0.008 Sum_probs=139.0
Q ss_pred EECCCCcEEEEEEeccCCceE-EEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCc
Q 004766 138 SVSEDAKYLAYALSYSGSDWA-TIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNL 216 (732)
Q Consensus 138 ~~SPDG~~la~~~~~~G~e~~-~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~ 216 (732)
..+|||++ +|+.+..+.... +|+++|.++++.+.....+.. .++++||||++||++...... ..+...
T Consensus 27 ~~~~~~~~-~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~-p~i~~spDg~~lyv~n~~~~~---------~~rg~~ 95 (373)
T 2mad_H 27 APGADGRR-SYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL-PNPVAAHSGSEFALASTSFSR---------IAKGKR 95 (373)
T ss_pred cCCCCCCE-EEEeCCcccCCccEEEEEECCCCeEEEEecCCCC-CCeEECCCCCEEEEEeccccc---------cccCCC
Confidence 45688965 677764222212 899999999986543222222 489999999999887532100 000112
Q ss_pred ccEEEEEECCCCCCCCeEEEecCCC---CeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccc-ccccCCC
Q 004766 217 YHEFYYHFLGTKQSEDILCWKDPEH---PKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG-FKKRDGL 292 (732)
Q Consensus 217 ~~~v~~~~lgt~~~~~~~v~~~~~~---~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~~~~~~~ 292 (732)
...|.+++..+......+-...... ...-..+.+||||++|++..... .+.|.++| ++++.. .. +.. +
T Consensus 96 ~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~---~~~v~viD-~t~~~~-~~~i~~---~ 167 (373)
T 2mad_H 96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA---GPAVGLVV-QGGSSD-DQLLSS---P 167 (373)
T ss_pred CCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC---CCeEEEEE-CCCCEE-eEEcCC---C
Confidence 3457788876543221111110000 01123688999999998764322 25688899 775311 11 100 0
Q ss_pred CCcEEeeecccceEE-------------------------------------EEEecCCeEEEEeCCCCCCceEEEEeCC
Q 004766 293 LPFVKLIDGFDAQYE-------------------------------------VIANDDTVFTFLTNKDAPKYKIIRVDLK 335 (732)
Q Consensus 293 ~~~~~l~~~~~~~~~-------------------------------------~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 335 (732)
.+. .+.......+. .++++++.+++.+. ..+++.+|+.
T Consensus 168 ~~~-~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~v~vid~~ 242 (373)
T 2mad_H 168 TCY-HIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVY----SGKILQADIS 242 (373)
T ss_pred ceE-EEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcC----CceEEEEecc
Confidence 000 00000000001 12333444444432 1257777776
Q ss_pred CCCC-c-eE--eccCC---C---CCceeEEEEecC-CEEEEEEecC-------CeeEEEEEeCCCCceeeecccccceee
Q 004766 336 EPND-W-FE--VIPEA---E---RDVLESATAVNL-NQMIVSYLSD-------VKYVLQIRDLKNGSLLHQLPIEIGSVN 397 (732)
Q Consensus 336 ~~~~-~-~~--l~~~~---~---~~~l~~~~~~~~-~~l~~~~~~~-------g~~~l~~~d~~~g~~~~~l~~~~g~v~ 397 (732)
+... . .. +.... . ......+.++++ +++|+..... ....|+++|+++++.+++|+.+. ...
T Consensus 243 ~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~ 321 (373)
T 2mad_H 243 AAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVD 321 (373)
T ss_pred CCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcC
Confidence 5430 0 00 00000 0 001122455554 5677655421 23589999999888878886553 345
Q ss_pred EeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 398 AISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 398 ~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.+.+++|++.+++..+.. ...+..+|+++++
T Consensus 322 ~i~~s~Dg~~~l~v~~~~--~~~V~ViD~~t~~ 352 (373)
T 2mad_H 322 AISVAQDGGPDLYALSAG--TEVLHIYDAGAGD 352 (373)
T ss_pred eEEECCCCCeEEEEEcCC--CCeEEEEECCCCC
Confidence 778899999555554322 3689999998885
No 347
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.93 E-value=7e-08 Score=119.26 Aligned_cols=253 Identities=10% Similarity=0.078 Sum_probs=153.7
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...+..++|||||++||.... ..+|+|||+.+|+.+... ........++|+|+++..++.+.
T Consensus 657 ~~~v~~~~~s~~~~~l~s~~~-----d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg------------ 719 (1249)
T 3sfz_A 657 EDEVLCCAFSSDDSYIATCSA-----DKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATG------------ 719 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEET-----TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEE------------
T ss_pred CCCEEEEEEecCCCEEEEEeC-----CCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEE------------
Confidence 345778999999999986642 247999999999855321 12223478999997654333321
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
.....|.+|++.++.. +.....+...+..+.|+|||++|+..+.+ ..|.++|+.++... ..+...
T Consensus 720 -----~~d~~v~vwd~~~~~~----~~~~~~h~~~v~~~~~sp~~~~l~s~s~d-----g~v~vwd~~~~~~~-~~~~~~ 784 (1249)
T 3sfz_A 720 -----SNDFFLKLWDLNQKEC----RNTMFGHTNSVNHCRFSPDDELLASCSAD-----GTLRLWDVRSANER-KSINVK 784 (1249)
T ss_dssp -----ETTSCEEEEETTSSSE----EEEECCCSSCEEEEEECSSTTEEEEEESS-----SEEEEEEGGGTEEE-EEEECC
T ss_pred -----eCCCeEEEEECCCcch----hheecCCCCCEEEEEEecCCCEEEEEECC-----CeEEEEeCCCCccc-ceeccc
Confidence 1223588999877542 22222234456789999999998876543 34778887763210 000000
Q ss_pred CCCCCcEEeeecc--cceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEE
Q 004766 290 DGLLPFVKLIDGF--DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSY 367 (732)
Q Consensus 290 ~~~~~~~~l~~~~--~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~ 367 (732)
............. ......|+|+|+.+++.++ ..+..+|+.++.....+... ....+..+.+++++.+++..
T Consensus 785 ~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~-----~~v~~~d~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~ 858 (1249)
T 3sfz_A 785 RFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK-----NKVLLFDIHTSGLLAEIHTG-HHSTIQYCDFSPYDHLAVIA 858 (1249)
T ss_dssp CCC--------CCCCCBCCCCBCTTSSEEEEEET-----TEEEEEETTTCCEEEEEECS-SSSCCCEEEECSSTTEEEEE
T ss_pred ccccccCCccccccceEEEEEECCCCCEEEEEcC-----CcEEEEEecCCCceeEEcCC-CCCceEEEEEcCCCCEEEEE
Confidence 0000000000000 0111248899998887552 46889999887633333322 23567888888877777777
Q ss_pred ecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 368 LSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 368 ~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
..++ .|.+|++.+++....+..+.+.+..+.++++++.++. .+. -..+..|++.
T Consensus 859 ~~dg--~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s-~s~---dg~v~vw~~~ 912 (1249)
T 3sfz_A 859 LSQY--CVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLT-ASD---DQTIRVWETK 912 (1249)
T ss_dssp CSSS--CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE-EET---TSCEEEEEHH
T ss_pred eCCC--eEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEE-EeC---CCeEEEEEcc
Confidence 7664 6889999888766666656677888899999986553 332 2456677654
No 348
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.93 E-value=2e-09 Score=119.01 Aligned_cols=127 Identities=17% Similarity=0.126 Sum_probs=87.7
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCc---cCCCCcChhHHHHHHhcCcEEEEEcccCCC-CCchhHHhcccccCCcc
Q 004766 465 IPMFIVSKKNIKLDGSHPCLLYGYGGFNI---SVTPSFSVSRTILMRHLGAVFCIANIRGGG-EYGEEWHKGGALAKKQN 540 (732)
Q Consensus 465 i~~~~~~p~~~~~~~~~P~vv~~hG~~~~---~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g-~~g~~~~~~~~~~~~~~ 540 (732)
+.+.++.|+.. .++.|+||++|||... .....|.. ..++.+.|++|+.+|||.+. +|.... .........
T Consensus 93 l~lnv~~P~~~--~~~~Pv~v~iHGGg~~~g~~~~~~~~~--~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~~~~n~ 166 (529)
T 1p0i_A 93 LYLNVWIPAPK--PKNATVLIWIYGGGFQTGTSSLHVYDG--KFLARVERVIVVSMNYRVGALGFLALP--GNPEAPGNM 166 (529)
T ss_dssp CEEEEEEESSC--CSSEEEEEEECCSTTTSCCTTCGGGCT--HHHHHHHCCEEEEECCCCHHHHHCCCT--TCTTSCSCH
T ss_pred CeEEEeeCCCC--CCCCeEEEEECCCccccCCCCccccCh--HHHhccCCeEEEEecccccccccccCC--CCCCCcCcc
Confidence 45566778653 2578999999998532 22223443 23444479999999999541 111100 000122334
Q ss_pred HHHHHHHHHHHHHHc---CCCCCCcEEEEecChhHHHHHHHHhhC--CCeeeEEEEcCCccc
Q 004766 541 CFDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQR--PDLFGCALAHVGVMD 597 (732)
Q Consensus 541 ~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~--p~~f~a~v~~~p~~d 597 (732)
.+.|+++|++|+.++ --.||+||.|+|+|+||.+++.++... +.+|+++|+.+|...
T Consensus 167 gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 167 GLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred cHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 589999999999876 236999999999999999999888753 468999999999764
No 349
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.93 E-value=3.9e-07 Score=95.94 Aligned_cols=267 Identities=11% Similarity=0.036 Sum_probs=139.4
Q ss_pred CCCCcEEEEEEeccCC--ceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcc
Q 004766 140 SEDAKYLAYALSYSGS--DWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLY 217 (732)
Q Consensus 140 SPDG~~la~~~~~~G~--e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~ 217 (732)
.||+++ +|+.+.+.+ ....|+++|.++++.+.....+... ++++||||++||.+...... .......
T Consensus 12 ~~~~~~-~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~---------~~~g~~~ 80 (361)
T 2oiz_A 12 APQENR-IYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHER---------ITRGKRS 80 (361)
T ss_dssp SCGGGE-EEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETT---------SSSSCEE
T ss_pred CCCCCE-EEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccc---------cccCCCC
Confidence 358876 566553311 1248999999999865432223333 89999999998877531100 0001123
Q ss_pred cEEEEEECCCCCCCCeEEEecCC--CCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccc-ccccCCCCC
Q 004766 218 HEFYYHFLGTKQSEDILCWKDPE--HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG-FKKRDGLLP 294 (732)
Q Consensus 218 ~~v~~~~lgt~~~~~~~v~~~~~--~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~~~~~~~~~ 294 (732)
..|..+++.+......+-..... .......+++||||++|+...... .+.|.++|++++.. +.. +.. ..+
T Consensus 81 ~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~---~~~v~v~d~~~~~~-~~~~i~~---~~~ 153 (361)
T 2oiz_A 81 DVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP---ATSIGIVDVAKGDY-VEDVTAA---AGC 153 (361)
T ss_dssp EEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS---SEEEEEEETTTTEE-EEEEGGG---TTE
T ss_pred CEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC---CCeEEEEECCCCcE-EEEEecC---CCc
Confidence 46888888765432221111000 001123578999999997664321 25688889876421 111 100 000
Q ss_pred cEEeeeccc-ceEEEEEecCC--------------------------------------eEEEEeCCCCCCceEEEEeCC
Q 004766 295 FVKLIDGFD-AQYEVIANDDT--------------------------------------VFTFLTNKDAPKYKIIRVDLK 335 (732)
Q Consensus 295 ~~~l~~~~~-~~~~~~s~dg~--------------------------------------~l~~~s~~~~~~~~l~~~d~~ 335 (732)
+........ ..+...++||+ .+++.+. ..+++.+|+.
T Consensus 154 ~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~v~v~d~~ 229 (361)
T 2oiz_A 154 WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSY----YGNVYSADFS 229 (361)
T ss_dssp EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBT----TSEEEEEECS
T ss_pred ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeC----CCeEEEEEec
Confidence 000000000 01112233333 3333321 1246777765
Q ss_pred CCCCceEe-----ccC---CCCCce---eEEEEecC-CEEEEEEecC--------CeeEEEEEeCCCCceeeecccccce
Q 004766 336 EPNDWFEV-----IPE---AERDVL---ESATAVNL-NQMIVSYLSD--------VKYVLQIRDLKNGSLLHQLPIEIGS 395 (732)
Q Consensus 336 ~~~~~~~l-----~~~---~~~~~l---~~~~~~~~-~~l~~~~~~~--------g~~~l~~~d~~~g~~~~~l~~~~g~ 395 (732)
+.. ...+ ... ...... ..+.++++ +++|+....+ ....|++||+++++.+..+..+.
T Consensus 230 ~~~-~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-- 306 (361)
T 2oiz_A 230 GDE-VKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-- 306 (361)
T ss_dssp SSS-CEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--
T ss_pred CCC-ceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--
Confidence 443 1110 000 000000 12566665 6777765522 23489999999998877777655
Q ss_pred eeEeecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEe
Q 004766 396 VNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRE 438 (732)
Q Consensus 396 v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~ 438 (732)
...+.+++|++.++.+ + . ..+..+|+++++ ++.+..
T Consensus 307 p~~ia~spdg~~l~v~-n-~---~~v~v~D~~t~~--l~~~~~ 342 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTL-D-G---GNVNVYDISQPE--PKLLRT 342 (361)
T ss_dssp CCEEEEETTTTEEEEE-C-S---SCEEEEECSSSS--CEEEEE
T ss_pred eeEEEECCCCCEEEEe-C-C---CeEEEEECCCCc--ceeeEE
Confidence 6788899999966533 2 2 889999999883 344443
No 350
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.93 E-value=3.2e-07 Score=97.75 Aligned_cols=201 Identities=12% Similarity=0.123 Sum_probs=118.3
Q ss_pred EEEEeEEECC-CCcEEEEEEeccCCceEEEEEEECCCCceecccc--------------cceeeeeEEEEe-CCcEEEEE
Q 004766 132 AALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL--------------SWFKFSSIAWTH-DSKGFFYS 195 (732)
Q Consensus 132 ~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~--------------~~~~~~~~~Wsp-Dg~~l~y~ 195 (732)
..+..++||| ||++||.... + ..|++||+.+++...... .......++|+| +++.|+..
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~-d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGS-D----GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEET-T----SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred CcEEEEEEecCCCCEEEEEcC-C----CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 3467899999 9999887642 2 379999999876432111 222357899999 55566655
Q ss_pred EecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecC---CcEEEEEEecCCcceEEEE
Q 004766 196 RYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTED---GQYLVMCIEENCDPVNKVY 272 (732)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpD---g~~l~~~~~~~~~~~~~l~ 272 (732)
.. ...|.+|++.++.. ...+... .....+.++|. +.+++....++ .+.
T Consensus 119 ~~-------------------d~~i~iwd~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~ 169 (408)
T 4a11_B 119 SF-------------------DKTLKVWDTNTLQT--ADVFNFE---ETVYSHHMSPVSTKHCLVAVGTRGP-----KVQ 169 (408)
T ss_dssp ET-------------------TSEEEEEETTTTEE--EEEEECS---SCEEEEEECSSCSSCCEEEEEESSS-----SEE
T ss_pred eC-------------------CCeEEEeeCCCCcc--ceeccCC---CceeeeEeecCCCCCcEEEEEcCCC-----eEE
Confidence 32 23688999886532 2233322 23456777774 44776655433 388
Q ss_pred EEeCCCCCCCcccccccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-CceEecc-----
Q 004766 273 YCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIP----- 345 (732)
Q Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~----- 345 (732)
++|+.++. ....+....... ...|+|+++.+++....+ ..|..+|+.++. ....+-.
T Consensus 170 ~~d~~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~ 233 (408)
T 4a11_B 170 LCDLKSGS-------------CSHILQGHRQEILAVSWSPRYDYILATASAD---SRVKLWDVRRASGCLITLDQHNGKK 233 (408)
T ss_dssp EEESSSSC-------------CCEEECCCCSCEEEEEECSSCTTEEEEEETT---SCEEEEETTCSSCCSEECCTTTTCS
T ss_pred EEeCCCcc-------------eeeeecCCCCcEEEEEECCCCCcEEEEEcCC---CcEEEEECCCCCccccccccccccc
Confidence 88987642 122332222211 225889988755554433 357888886553 1222200
Q ss_pred --------CCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCc
Q 004766 346 --------EAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGS 384 (732)
Q Consensus 346 --------~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~ 384 (732)
......+..+.+++++..+++...++ .|.+||+.+++
T Consensus 234 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~vwd~~~~~ 278 (408)
T 4a11_B 234 SQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN--RMRLWNSSNGE 278 (408)
T ss_dssp CCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS--CEEEEETTTCC
T ss_pred ceeeccccccccCceeEEEEcCCCCEEEEecCCC--eEEEEECCCCc
Confidence 11134577888888666666666664 57777776554
No 351
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.92 E-value=3.2e-08 Score=109.55 Aligned_cols=248 Identities=10% Similarity=0.027 Sum_probs=142.6
Q ss_pred EEeEEECCCC---------cEEEEEEec--------------cCCceEEEEEEECCCCceec-----ccccceeeeeEEE
Q 004766 134 LIKVSVSEDA---------KYLAYALSY--------------SGSDWATIKLMRIEDQIVEA-----DALSWFKFSSIAW 185 (732)
Q Consensus 134 ~~~~~~SPDG---------~~la~~~~~--------------~G~e~~~i~v~dl~~g~~~~-----~~~~~~~~~~~~W 185 (732)
+..+.|+|++ ++||.+... .++...+|+|||+++++... .......+..++|
T Consensus 136 V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~w 215 (524)
T 2j04_B 136 VTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKW 215 (524)
T ss_dssp -CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEE
T ss_pred eeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEE
Confidence 4466788876 777776533 13445689999998876311 1111112467999
Q ss_pred EeC------CcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCC---------CeEEEecCCCCeeEEEeEE
Q 004766 186 THD------SKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSE---------DILCWKDPEHPKYIFSGHV 250 (732)
Q Consensus 186 spD------g~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~---------~~~v~~~~~~~~~~~~~~~ 250 (732)
+|+ ++.|+....+ ..|.+|++.++... ....+.. +...+.+++|
T Consensus 216 sp~~~~~~~~~~LAs~s~D-------------------gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~--h~~~v~sv~~ 274 (524)
T 2j04_B 216 HEGCHAPHLVGCLSFVSQE-------------------GTINFLEIIDNATDVHVFKMCEKPSLTLSL--ADSLITTFDF 274 (524)
T ss_dssp CSSCCCSSSSCEEEEEETT-------------------SCEEEEECCCCSSSSSEEECCCSCSEEECC--TTTCEEEEEE
T ss_pred CCCCCCCCCCceEEEEecC-------------------CeEEEEEcCCCccccccceeecCceEEEEc--CCCCEEEEEe
Confidence 997 4566655433 25888888655321 0112222 2235678999
Q ss_pred ecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEE---EEEecCCeEEEEeCCCCCCc
Q 004766 251 TEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYE---VIANDDTVFTFLTNKDAPKY 327 (732)
Q Consensus 251 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~s~dg~~l~~~s~~~~~~~ 327 (732)
++++ .|+..+.+ ..|.++|+.++. .+...+......... .++++|..+++.+.. ..
T Consensus 275 s~~~-~lasgs~D-----gtV~lWD~~~~~------------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~---D~ 333 (524)
T 2j04_B 275 LSPT-TVVCGFKN-----GFVAEFDLTDPE------------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV---DG 333 (524)
T ss_dssp SSSS-EEEEEETT-----SEEEEEETTBCS------------SCSEEEECSSSCEEEEEEECCTTSCCEEEEEET---TS
T ss_pred cCCC-eEEEEeCC-----CEEEEEECCCCC------------CceEEeecccccEEEEEEEcCCCCCeEEEEecc---CC
Confidence 9875 55444332 348888987632 112222222222222 246666344444433 34
Q ss_pred eEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcE
Q 004766 328 KIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSV 407 (732)
Q Consensus 328 ~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~ 407 (732)
.|.++|+.++.....+..+.....+..+.+++++..+++...+ ..|.+||+.++..+..+..+.+.|..++++|+++.
T Consensus 334 tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d--~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~ 411 (524)
T 2j04_B 334 YFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGA--SSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPM 411 (524)
T ss_dssp EEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSS--SEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCB
T ss_pred eEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCC--CcEEEEECcccccceeeecCCCceEEEEeCCCCCe
Confidence 6888898765433344443322235678888865566666655 36899999877765556556778889999999986
Q ss_pred EEEEEecCCCCceEEEEECCCC
Q 004766 408 VFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 408 l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
++ +.+. -.++..+|+..+
T Consensus 412 l~-Sgs~---Dgtv~lwd~~~~ 429 (524)
T 2j04_B 412 VL-AGSA---DGSLIITNAARR 429 (524)
T ss_dssp CE-EEET---TTEEECCBSCSS
T ss_pred EE-EEEC---CCEEEEEechHh
Confidence 54 3332 246777776543
No 352
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.92 E-value=6.2e-08 Score=119.72 Aligned_cols=245 Identities=13% Similarity=0.092 Sum_probs=151.3
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
...+..++|||||++||.... + .+|++||+.+++.+... ........++|+|||+.|+....+
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~-d----~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d----------- 678 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGA-D----KTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSAD----------- 678 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEET-T----SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-----------
T ss_pred cccEEEEEECCCCCEEEEEeC-C----CeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCC-----------
Confidence 345778999999999986632 2 37999999999854321 122235789999999988876532
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 289 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 289 (732)
..|.+|++.++.. +..+.. +...+..+.|+|++...++.+.... ..+.++|+.++.
T Consensus 679 --------~~v~vwd~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~~l~sg~~d---~~v~vwd~~~~~--------- 734 (1249)
T 3sfz_A 679 --------KKVKIWDSATGKL--VHTYDE--HSEQVNCCHFTNKSNHLLLATGSND---FFLKLWDLNQKE--------- 734 (1249)
T ss_dssp --------SEEEEEETTTCCE--EEEEEC--CSSCEEEEEECSSSSCCEEEEEETT---SCEEEEETTSSS---------
T ss_pred --------CeEEEEECCCCce--EEEEcC--CCCcEEEEEEecCCCceEEEEEeCC---CeEEEEECCCcc---------
Confidence 3699999987642 223332 3345678899997554333332222 348888987742
Q ss_pred CCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEecc-----------CCCCCceeEEEE
Q 004766 290 DGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIP-----------EAERDVLESATA 357 (732)
Q Consensus 290 ~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~-----------~~~~~~l~~~~~ 357 (732)
....+....... ...|+|+|+.++..+.. ..|..+|+.++.....+.. ......+..+.+
T Consensus 735 ----~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 806 (1249)
T 3sfz_A 735 ----CRNTMFGHTNSVNHCRFSPDDELLASCSAD----GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSW 806 (1249)
T ss_dssp ----EEEEECCCSSCEEEEEECSSTTEEEEEESS----SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCB
T ss_pred ----hhheecCCCCCEEEEEEecCCCEEEEEECC----CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEE
Confidence 122222222222 22589999877765543 3688888876542222111 011124556677
Q ss_pred ecCCEEEEEEecCCeeEEEEEeCCCCceeeeccc-ccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 358 VNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI-EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 358 ~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~-~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
++++..++.... ..+.+|++.++.....+.. ..+.+..+.+++++..++.... -..+..||+.+++
T Consensus 807 s~dg~~l~~~~~---~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----dg~v~vwd~~~~~ 873 (1249)
T 3sfz_A 807 SADGDKIIVAAK---NKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS----QYCVELWNIDSRL 873 (1249)
T ss_dssp CTTSSEEEEEET---TEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECS----SSCEEEEETTTTE
T ss_pred CCCCCEEEEEcC---CcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeC----CCeEEEEEcCCCc
Confidence 776555555543 3688999987776555543 3566777888999986664433 3468888887763
No 353
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=98.92 E-value=9.7e-09 Score=105.79 Aligned_cols=120 Identities=16% Similarity=0.054 Sum_probs=85.5
Q ss_pred eeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHH
Q 004766 463 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCF 542 (732)
Q Consensus 463 ~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~ 542 (732)
.++...++.|+.+. .+..+.||++||..+.... .|...+...|.++||.|+.+|+||.|... .....
T Consensus 14 ~~l~~~i~~p~~~~-~~~~~~VvllHG~~~~~~~-~~~~~l~~~L~~~G~~v~~~d~~g~g~~~-----------~~~~~ 80 (317)
T 1tca_A 14 SVLDAGLTCQGASP-SSVSKPILLVPGTGTTGPQ-SFDSNWIPLSTQLGYTPCWISPPPFMLND-----------TQVNT 80 (317)
T ss_dssp HHHHHTEEETTBCT-TSCSSEEEEECCTTCCHHH-HHTTTHHHHHHTTTCEEEEECCTTTTCSC-----------HHHHH
T ss_pred HHHhheeeCCCCCC-CCCCCeEEEECCCCCCcch-hhHHHHHHHHHhCCCEEEEECCCCCCCCc-----------HHHHH
Confidence 45556677777653 3455779999998776422 14323456677689999999999865311 11235
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCC---CeeeEEEEcCCccc
Q 004766 543 DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRP---DLFGCALAHVGVMD 597 (732)
Q Consensus 543 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~p~~d 597 (732)
+++.+.++++.+.. ..+++.++|||+||+++..++.++| +.++++|+..|..+
T Consensus 81 ~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~ 136 (317)
T 1tca_A 81 EYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp HHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCC
Confidence 77888888887652 2368999999999999998887765 78999998887643
No 354
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.92 E-value=3.1e-07 Score=95.41 Aligned_cols=223 Identities=9% Similarity=0.034 Sum_probs=137.8
Q ss_pred EEEeEEECCCCc-EEEEEEeccCCceEEEEEEEC-CCCceecccc--cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 133 ALIKVSVSEDAK-YLAYALSYSGSDWATIKLMRI-EDQIVEADAL--SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 133 ~~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl-~~g~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
.+..+.|||||+ +|+.... + ..|++||+ .+++...... .......++|+| ++.|+....+
T Consensus 58 ~v~~~~~~~~~~~~l~~~~~-d----g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d---------- 121 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYVGTV-Q----GEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWD---------- 121 (342)
T ss_dssp CEEEEEEEESSSEEEEEEET-T----SCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETT----------
T ss_pred ceEEEEECCCCCcEEEEEcC-C----CeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCC----------
Confidence 467899999999 7876642 2 37999999 8887543322 223357899999 8888776533
Q ss_pred CCcccCCcccEEEEEECCC---------CCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC-
Q 004766 209 GTETDSNLYHEFYYHFLGT---------KQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA- 278 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt---------~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~- 278 (732)
..|++|++.+ ..... .+ . .......+.|+|++ ++.... ...|.++|+.+
T Consensus 122 ---------~~i~iwd~~~~~~~~~~~~~~~~~--~~--~-~~~~v~~~~~~~~~--l~~~~~-----d~~i~i~d~~~~ 180 (342)
T 1yfq_A 122 ---------GLIEVIDPRNYGDGVIAVKNLNSN--NT--K-VKNKIFTMDTNSSR--LIVGMN-----NSQVQWFRLPLC 180 (342)
T ss_dssp ---------SEEEEECHHHHTTBCEEEEESCSS--SS--S-SCCCEEEEEECSSE--EEEEES-----TTEEEEEESSCC
T ss_pred ---------CeEEEEcccccccccccccCCeee--EE--e-eCCceEEEEecCCc--EEEEeC-----CCeEEEEECCcc
Confidence 3688888764 22111 11 1 23345688999998 444332 23588889876
Q ss_pred CCCCcccccccCCCCCcEEeeecccc--eEEEEEe-cCCeEEEEeCCCCCCceEEEEeCCCC------CCceEeccCCC-
Q 004766 279 LPEGLEGFKKRDGLLPFVKLIDGFDA--QYEVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEP------NDWFEVIPEAE- 348 (732)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~------~~~~~l~~~~~- 348 (732)
+.. ........... ....|+| +++.++..+.. ..+..++++.. .....+..+..
T Consensus 181 ~~~------------~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T 1yfq_A 181 EDD------------NGTIEESGLKYQIRDVALLPKEQEGYACSSID----GRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244 (342)
T ss_dssp TTC------------CCEEEECSCSSCEEEEEECSGGGCEEEEEETT----SEEEEEECCTTCCSTTCTTCEEEECCCCC
T ss_pred ccc------------cceeeecCCCCceeEEEECCCCCCEEEEEecC----CcEEEEEEcCCCcccccccceeeeccccc
Confidence 321 11112221111 1225888 88877765542 34666665544 32334433321
Q ss_pred ------CCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEeecccCCcEEEEEE
Q 004766 349 ------RDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFISF 412 (732)
Q Consensus 349 ------~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~d~~~l~~~~ 412 (732)
...+..+.+++++.++++...++ .|++||+.+++.+..+... .+.+..+. +++..++...
T Consensus 245 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s 311 (342)
T 1yfq_A 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDG--IISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLAT 311 (342)
T ss_dssp TTCCSSCCCEEEEEECTTTCCEEEEETTS--CEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEE
T ss_pred ccccccceeEEEEEEcCCCCEEEEecCCc--eEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEe
Confidence 12688899988767777777774 6899999888876777665 66777776 7887655443
No 355
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.91 E-value=2.6e-06 Score=86.91 Aligned_cols=234 Identities=12% Similarity=0.059 Sum_probs=142.4
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+..+.| |||++|+.... ...|++||+.+++..... ........++|+||++.|+....+.
T Consensus 20 ~v~~~~~-~~~~~l~s~~~-----dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------------ 81 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSR-----DGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT------------ 81 (313)
T ss_dssp CEEEEEE-EETTEEEEEET-----TSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS------------
T ss_pred CcEEEEe-cCCCEEEEEEc-----CCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC------------
Confidence 4667888 99999875532 248999999888744321 1122357899999999988875432
Q ss_pred ccCCcccEEEEEECCCCCCCC-eEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 212 TDSNLYHEFYYHFLGTKQSED-ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~-~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
.+..|++....... ...+. .+...+..+.| ++++++....+ ..+.++|...
T Consensus 82 -------~i~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~--~~~~l~~~~~d-----~~i~~~d~~~------------ 133 (313)
T 3odt_A 82 -------MINGVPLFATSGEDPLYTLI--GHQGNVCSLSF--QDGVVISGSWD-----KTAKVWKEGS------------ 133 (313)
T ss_dssp -------CEEEEETTCCTTSCC-CEEC--CCSSCEEEEEE--ETTEEEEEETT-----SEEEEEETTE------------
T ss_pred -------eEEEEEeeecCCCCcccchh--hcccCEEEEEe--cCCEEEEEeCC-----CCEEEEcCCc------------
Confidence 47777776543221 11222 22334455666 67777655432 3477777221
Q ss_pred CCCCcEEeeecccceE-EEEEe-cCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 291 GLLPFVKLIDGFDAQY-EVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~~-~~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
....+........ ..+.+ +++.++..+.. ..|..+|.... ...+.. .....+..+.+++++. ++...
T Consensus 134 ---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~--~~~~~~-~~~~~i~~~~~~~~~~-~~~~~ 202 (313)
T 3odt_A 134 ---LVYNLQAHNASVWDAKVVSFSENKFLTASAD----KTIKLWQNDKV--IKTFSG-IHNDVVRHLAVVDDGH-FISCS 202 (313)
T ss_dssp ---EEEEEECCSSCEEEEEEEETTTTEEEEEETT----SCEEEEETTEE--EEEECS-SCSSCEEEEEEEETTE-EEEEE
T ss_pred ---EEEecccCCCceeEEEEccCCCCEEEEEECC----CCEEEEecCce--EEEEec-cCcccEEEEEEcCCCe-EEEcc
Confidence 1222222222222 23566 77777655442 35777773322 233332 1246688899988666 56666
Q ss_pred cCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.++ .|++||+.+++.+..+..+.+.+..+.+++++ .++ +.+ .-..++.||+.+++
T Consensus 203 ~dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~-~~~---~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 203 NDG--LIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIV-SCG---EDRTVRIWSKENGS 257 (313)
T ss_dssp TTS--EEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEE-EEE---TTSEEEEECTTTCC
T ss_pred CCC--eEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEE-EEe---cCCEEEEEECCCCc
Confidence 664 79999998888766776566778888899988 343 332 24679999998875
No 356
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.91 E-value=8.5e-07 Score=94.78 Aligned_cols=238 Identities=9% Similarity=-0.006 Sum_probs=147.1
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc--cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL--SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
+..+.||++ ..++... + ..|++||+++|+...... .......++|+|||+.|+....+
T Consensus 96 ~~~~~~s~~-~l~~~~~--d----~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d------------- 155 (401)
T 4aez_A 96 LNLLDWSNL-NVVAVAL--E----RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN------------- 155 (401)
T ss_dssp CBCEEECTT-SEEEEEE--T----TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT-------------
T ss_pred EEEEeecCC-CEEEEEC--C----CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC-------------
Confidence 445778873 3444332 2 379999999998543211 12235789999999998887533
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
..|.+|++.++.. +..+. .+...+..+.| +++.++..+.+ ..+.++|+....
T Consensus 156 ------g~i~iwd~~~~~~--~~~~~--~~~~~v~~~~~--~~~~l~~~~~d-----g~i~i~d~~~~~----------- 207 (401)
T 4aez_A 156 ------GLVDIYDVESQTK--LRTMA--GHQARVGCLSW--NRHVLSSGSRS-----GAIHHHDVRIAN----------- 207 (401)
T ss_dssp ------SCEEEEETTTCCE--EEEEC--CCSSCEEEEEE--ETTEEEEEETT-----SEEEEEETTSSS-----------
T ss_pred ------CeEEEEECcCCeE--EEEec--CCCCceEEEEE--CCCEEEEEcCC-----CCEEEEecccCc-----------
Confidence 2588889876532 22222 22334556677 56776655432 348888987421
Q ss_pred CCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEec
Q 004766 292 LLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLS 369 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~ 369 (732)
.....+........ ..|+|++..|+..+.. ..|..+|+.++.....+..+. ..+..+.++++ ..+++....
T Consensus 208 -~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~~~~~~~~~~~~~--~~v~~~~~~p~~~~ll~~~~g 280 (401)
T 4aez_A 208 -HQIGTLQGHSSEVCGLAWRSDGLQLASGGND----NVVQIWDARSSIPKFTKTNHN--AAVKAVAWCPWQSNLLATGGG 280 (401)
T ss_dssp -CEEEEEECCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTCSSEEEEECCCS--SCCCEEEECTTSTTEEEEECC
T ss_pred -ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC----CeEEEccCCCCCccEEecCCc--ceEEEEEECCCCCCEEEEecC
Confidence 11222322222222 2488988877765543 368889998876334444443 56788999874 467766542
Q ss_pred CCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 370 DVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.....|++||+.+++.+..+. ....+..+.++++++.++.+..+ .-..++.||+.++
T Consensus 281 s~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~--~dg~i~v~~~~~~ 337 (401)
T 4aez_A 281 TMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGF--PDNNLSIWSYSSS 337 (401)
T ss_dssp TTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECT--TTCEEEEEEEETT
T ss_pred CCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeec--CCCcEEEEecCCc
Confidence 112579999998887766664 34567788899999877654322 2357888887776
No 357
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=98.91 E-value=1.1e-09 Score=108.56 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=64.3
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHc-CC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA-GY 557 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~ 557 (732)
+..|.||++||..+... .|.. +...|. .+|.|+++|.||.|.... ...+|+.+.++.+.+. +.
T Consensus 11 ~~~~~lv~lhg~g~~~~--~~~~-~~~~L~-~~~~vi~~Dl~GhG~S~~------------~~~~~~~~~~~~~~~~l~~ 74 (242)
T 2k2q_B 11 SEKTQLICFPFAGGYSA--SFRP-LHAFLQ-GECEMLAAEPPGHGTNQT------------SAIEDLEELTDLYKQELNL 74 (242)
T ss_dssp TCCCEEESSCCCCHHHH--HHHH-HHHHHC-CSCCCEEEECCSSCCSCC------------CTTTHHHHHHHHTTTTCCC
T ss_pred CCCceEEEECCCCCCHH--HHHH-HHHhCC-CCeEEEEEeCCCCCCCCC------------CCcCCHHHHHHHHHHHHHh
Confidence 45678999999877642 3433 345566 689999999999886421 1235666666666543 22
Q ss_pred CCCCcEEEEecChhHHHHHHHHhh------CCCee
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQ------RPDLF 586 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~------~p~~f 586 (732)
...+++.++||||||+++..++.+ +|+..
T Consensus 75 ~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v 109 (242)
T 2k2q_B 75 RPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAV 109 (242)
T ss_dssp CCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSE
T ss_pred hcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEE
Confidence 223689999999999999998875 67753
No 358
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=98.90 E-value=2.4e-08 Score=98.66 Aligned_cols=200 Identities=11% Similarity=0.006 Sum_probs=116.3
Q ss_pred ccEEEEEcCCCCccCCCCcChhHHHHHHhcC---cEEEEEcccCCCC--CchhHH--------hcccccCC------ccH
Q 004766 481 HPCLLYGYGGFNISVTPSFSVSRTILMRHLG---AVFCIANIRGGGE--YGEEWH--------KGGALAKK------QNC 541 (732)
Q Consensus 481 ~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G---~~v~~~~~rG~g~--~g~~~~--------~~~~~~~~------~~~ 541 (732)
.+.||++||..+... .|.. +...|.++| +.|+.+++++.|. +...+. .-+...+. ...
T Consensus 4 ~~pvv~iHG~~~~~~--~~~~-~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~ 80 (250)
T 3lp5_A 4 MAPVIMVPGSSASQN--RFDS-LITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQ 80 (250)
T ss_dssp CCCEEEECCCGGGHH--HHHH-HHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHH
T ss_pred CCCEEEECCCCCCHH--HHHH-HHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHH
Confidence 456788999877532 3443 345565566 6777777765543 111110 00001111 112
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC-----CCeeeEEEEcCCcccccccccCCCCCccccccCC
Q 004766 542 FDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-----PDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGC 616 (732)
Q Consensus 542 ~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-----p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~ 616 (732)
.+++.+++++|.++- ..+++.++||||||+++..++.++ |+..+.+|+..+..+-.... .
T Consensus 81 a~~l~~~~~~l~~~~--~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~-------------~ 145 (250)
T 3lp5_A 81 AVWLNTAFKALVKTY--HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS-------------T 145 (250)
T ss_dssp HHHHHHHHHHHHTTS--CCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC-------------S
T ss_pred HHHHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc-------------c
Confidence 467778888887652 346899999999999999988876 67788887665543322110 0
Q ss_pred CCCHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEeeC----CCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCE
Q 004766 617 SEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD----HDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPI 692 (732)
Q Consensus 617 p~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~p~Li~~g~----~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 692 (732)
......++.|....+ .+. ...|+|+++|. +|..||...++.+...++.. ....
T Consensus 146 ~~~~~~~~~l~~~~~--~lp-----------~~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~----------~~~~ 202 (250)
T 3lp5_A 146 TAKTSMFKELYRYRT--GLP-----------ESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQ----------VKHF 202 (250)
T ss_dssp SCCCHHHHHHHHTGG--GSC-----------TTCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTT----------SSEE
T ss_pred cccCHHHHHHHhccc--cCC-----------CCceEEEEEecCCCCCCceeeHHHHHHHHHHhccc----------ccce
Confidence 011123444433211 111 24699999999 99999988887766666542 2333
Q ss_pred EEEEeC--CCCCCCCCchHHHHHHHHHHHHHHHH
Q 004766 693 IGRIER--KAGHGVGLPTQKMIDEAADRYGFMAK 724 (732)
Q Consensus 693 ~~~~~~--~~gH~~~~~~~~~~~~~~~~~~fl~~ 724 (732)
....+. +++|...... -+..+.+..||.+
T Consensus 203 ~~~~v~g~~a~H~~l~e~---~~v~~~I~~FL~~ 233 (250)
T 3lp5_A 203 TEITVTGANTAHSDLPQN---KQIVSLIRQYLLA 233 (250)
T ss_dssp EEEECTTTTBSSCCHHHH---HHHHHHHHHHTSC
T ss_pred EEEEEeCCCCchhcchhC---HHHHHHHHHHHhc
Confidence 334444 4679765322 2566677778753
No 359
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=98.90 E-value=2.7e-09 Score=114.81 Aligned_cols=113 Identities=12% Similarity=-0.034 Sum_probs=80.1
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHH-hcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMR-HLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 557 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 557 (732)
...|+||++||..+.. ...|...+...|. ..||.|+++|.||.|.... .... ..-....+|+.+.+++|.++.-
T Consensus 68 ~~~~~vvllHG~~~s~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~--~~~~--~~~~~~~~dl~~~i~~l~~~~g 142 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSG-ENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQY--SQAS--QNIRVVGAEVAYLVQVLSTSLN 142 (432)
T ss_dssp TTSEEEEEECCTTCCT-TSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCH--HHHH--HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhcCCcEEEEEECccccCccc--hhhH--hhHHHHHHHHHHHHHHHHHhcC
Confidence 4679999999987654 2234442333344 3699999999999775432 1110 0112334788888888875533
Q ss_pred CCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
++.+++.++|||+||.+++.++.++|++++.+++..|..
T Consensus 143 ~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 143 YAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 467899999999999999999999999999988876643
No 360
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.88 E-value=1.7e-07 Score=101.47 Aligned_cols=244 Identities=14% Similarity=0.108 Sum_probs=141.9
Q ss_pred EEEEeEEECC-CCcEEEEEEeccCCceEEEEEEECCC---Cceec--cc-ccceeeeeEEEEeCCcEEEEEEecCCCCCC
Q 004766 132 AALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIED---QIVEA--DA-LSWFKFSSIAWTHDSKGFFYSRYPAPKEGK 204 (732)
Q Consensus 132 ~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~~---g~~~~--~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~ 204 (732)
..+..++||| ||++||... ...+|+|||+.+ +.... .. ........++|+||++.|+....+
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s-----~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d------ 132 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGS-----DQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKD------ 132 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEE-----TTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETT------
T ss_pred CceEEEEECCCCCCEEEEec-----CCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCC------
Confidence 4577899999 999988664 224899999977 44221 11 112235789999999988877543
Q ss_pred CCCCCCcccCCcccEEEEEECC---CCCCCCe----EEE--ecCC--CCeeEEEeE--EecCCcEEEEEEecCCcceEEE
Q 004766 205 DMDAGTETDSNLYHEFYYHFLG---TKQSEDI----LCW--KDPE--HPKYIFSGH--VTEDGQYLVMCIEENCDPVNKV 271 (732)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~~~lg---t~~~~~~----~v~--~~~~--~~~~~~~~~--~SpDg~~l~~~~~~~~~~~~~l 271 (732)
..|.+|++. ++..... .+. .... .......+. +++|+++|+....+ ..|
T Consensus 133 -------------g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i 194 (437)
T 3gre_A 133 -------------GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNL-----SRV 194 (437)
T ss_dssp -------------SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETT-----SEE
T ss_pred -------------CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCC-----CeE
Confidence 257777764 2211100 010 0000 112223333 67899988776543 348
Q ss_pred EEEeCCCCCCCcccccccCCCCCcEEeee--cccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEec-cCC
Q 004766 272 YYCDLSALPEGLEGFKKRDGLLPFVKLID--GFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVI-PEA 347 (732)
Q Consensus 272 ~~~d~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~-~~~ 347 (732)
.++|+.++. ....+.. ...... ..|+|+++.|+..+.. ..|..+|+.++.....+. ++
T Consensus 195 ~iwd~~~~~-------------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~- 256 (437)
T 3gre_A 195 IIFDIRTLE-------------RLQIIENSPRHGAVSSICIDEECCVLILGTTR----GIIDIWDIRFNVLIRSWSFGD- 256 (437)
T ss_dssp EEEETTTCC-------------EEEEEECCGGGCCEEEEEECTTSCEEEEEETT----SCEEEEETTTTEEEEEEBCTT-
T ss_pred EEEeCCCCe-------------eeEEEccCCCCCceEEEEECCCCCEEEEEcCC----CeEEEEEcCCccEEEEEecCC-
Confidence 889987742 1233332 112122 2488998877765443 468889988765333332 33
Q ss_pred CCCceeEEEEec----CCEEEEEEecCCeeEEEEEeCCCCceeeecccc--------------------------cceee
Q 004766 348 ERDVLESATAVN----LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE--------------------------IGSVN 397 (732)
Q Consensus 348 ~~~~l~~~~~~~----~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~--------------------------~g~v~ 397 (732)
...+..+.+.+ ++.++++...+ ..|++||+.+++.+..+... .+.+.
T Consensus 257 -~~~v~~~~~~~~~s~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~ 333 (437)
T 3gre_A 257 -HAPITHVEVCQFYGKNSVIVVGGSSK--TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALS 333 (437)
T ss_dssp -CEEEEEEEECTTTCTTEEEEEEESTT--EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGC
T ss_pred -CCceEEEEeccccCCCccEEEEEcCC--CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceE
Confidence 24677775553 34577777777 47999999878754444321 11233
Q ss_pred EeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 398 AISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 398 ~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.+.++ +++ ++++.+. -..++.||+.+++
T Consensus 334 ~l~~~-~~~-~l~s~~~---d~~i~~wd~~~~~ 361 (437)
T 3gre_A 334 TISVS-NDK-ILLTDEA---TSSIVMFSLNELS 361 (437)
T ss_dssp CEEEE-TTE-EEEEEGG---GTEEEEEETTCGG
T ss_pred EEEEC-Cce-EEEecCC---CCeEEEEECCCcc
Confidence 44555 443 4444433 3589999998875
No 361
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.88 E-value=2.7e-07 Score=104.34 Aligned_cols=241 Identities=11% Similarity=0.065 Sum_probs=146.8
Q ss_pred EEeEEECC--CCcEEEEEEeccCCceEEEEEEECCCC--------ceecc-cccceeeeeEEEEeCCcEEEEEEecCCCC
Q 004766 134 LIKVSVSE--DAKYLAYALSYSGSDWATIKLMRIEDQ--------IVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKE 202 (732)
Q Consensus 134 ~~~~~~SP--DG~~la~~~~~~G~e~~~i~v~dl~~g--------~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~ 202 (732)
+..++||| ||++||.... ...|++||+.++ ..+.. .........++|+|||+.|+....+.
T Consensus 67 v~~~~~sp~~~~~~l~s~~~-----dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~--- 138 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDE-----SGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR--- 138 (615)
T ss_dssp EEEEEECSSTTCCEEEEEET-----TSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCS---
T ss_pred EEEEEECcCCCCCEEEEecC-----CCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCC---
Confidence 77899999 9999987642 247999999766 22211 11122357899999999998876432
Q ss_pred CCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCC
Q 004766 203 GKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEG 282 (732)
Q Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 282 (732)
.....|+.|+.+. .+.....+...+..+.|+|+|+++++..... ..+.++|+.++.
T Consensus 139 ------------~~~~~v~~~d~~~------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----~~v~vwd~~~~~-- 194 (615)
T 1pgu_A 139 ------------DNFGVFISWDSGN------SLGEVSGHSQRINACHLKQSRPMRSMTVGDD----GSVVFYQGPPFK-- 194 (615)
T ss_dssp ------------SCSEEEEETTTCC------EEEECCSCSSCEEEEEECSSSSCEEEEEETT----TEEEEEETTTBE--
T ss_pred ------------CCccEEEEEECCC------cceeeecCCccEEEEEECCCCCcEEEEEeCC----CcEEEEeCCCcc--
Confidence 1224577777332 2222233344567899999999655554432 347788877632
Q ss_pred cccccccCCCCCcEEeeeccc---ce-EEEEEec-CCeEEEEeCCCCCCceEEEEeCCCCCCceEeccC--CCCCceeEE
Q 004766 283 LEGFKKRDGLLPFVKLIDGFD---AQ-YEVIAND-DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPE--AERDVLESA 355 (732)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~---~~-~~~~s~d-g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~--~~~~~l~~~ 355 (732)
....+..... .. ...|+|+ |+.|+..+. ...|..+|+.+++....+... .....+..+
T Consensus 195 -----------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~ 259 (615)
T 1pgu_A 195 -----------FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS----DRKISCFDGKSGEFLKYIEDDQEPVQGGIFAL 259 (615)
T ss_dssp -----------EEEEECSSSCTTCCEEEEEECSTTCCEEEEEET----TCCEEEEETTTCCEEEECCBTTBCCCSCEEEE
T ss_pred -----------eeeeecccCCCCceEEEEEECCCCCCEEEEEeC----CCeEEEEECCCCCEeEEecccccccCCceEEE
Confidence 1222222222 11 2358998 877776544 236888999887633333120 223567888
Q ss_pred EEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc----cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 356 TAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE----IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 356 ~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~----~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.++ ++.++++...++ .|.+||+.+++.+..+..+ ...+..+.++ +++.++... . -..++.||+.++
T Consensus 260 ~~~-~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~-~---~g~i~~~d~~~~ 329 (615)
T 1pgu_A 260 SWL-DSQKFATVGADA--TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLS-L---DGTLNFYELGHD 329 (615)
T ss_dssp EES-SSSEEEEEETTS--EEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEE-T---TSCEEEEETTEE
T ss_pred EEc-CCCEEEEEcCCC--cEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEE-C---CCCEEEEECCCC
Confidence 888 667777777764 6889999888766666543 1333344443 566554332 2 356888887765
No 362
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.88 E-value=9.1e-08 Score=111.44 Aligned_cols=245 Identities=12% Similarity=-0.011 Sum_probs=147.3
Q ss_pred CCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc--eecc-cccceeeeeEEEEeC--CcEEEEEEecCCCCCC
Q 004766 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI--VEAD-ALSWFKFSSIAWTHD--SKGFFYSRYPAPKEGK 204 (732)
Q Consensus 130 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~--~~~~-~~~~~~~~~~~WspD--g~~l~y~~~~~~~~~~ 204 (732)
+.-.+..+.|||||++|+.+.. + ..|+|||+.++. .+.. ......+..++|+|+ ++.|+....+.
T Consensus 8 H~~~V~~l~~s~dg~~latg~~-d----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg----- 77 (753)
T 3jro_A 8 HNELIHDAVLDYYGKRLATCSS-D----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG----- 77 (753)
T ss_dssp CCCCEEEECCCSSSCCEEEEET-T----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS-----
T ss_pred CcceeEEEEECCCCCeEEEEEC-C----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC-----
Confidence 3345778999999998886632 2 379999998543 2211 111223578999998 88888775433
Q ss_pred CCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecC--CcEEEEEEecCCcceEEEEEEeCCCCCCC
Q 004766 205 DMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTED--GQYLVMCIEENCDPVNKVYYCDLSALPEG 282 (732)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 282 (732)
.|++|++.++... .+.....+...+..+.|+|+ |+.++..+.+ ..|.++|+.++..
T Consensus 78 --------------~I~vwd~~~~~~~--~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~~~- 135 (753)
T 3jro_A 78 --------------KVLIWKEENGRWS--QIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGT- 135 (753)
T ss_dssp --------------CEEEEEEETTEEE--EEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSSSC-
T ss_pred --------------eEEEEECCCCccc--ccccccCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecCCC-
Confidence 5888888765322 22222223445678999999 8988776543 3488888876421
Q ss_pred cccccccCCCCCcEEeeecccce-EEEEEe-------------cCCeEEEEeCCCCCCceEEEEeCCCCCC----ceEec
Q 004766 283 LEGFKKRDGLLPFVKLIDGFDAQ-YEVIAN-------------DDTVFTFLTNKDAPKYKIIRVDLKEPND----WFEVI 344 (732)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~-------------dg~~l~~~s~~~~~~~~l~~~d~~~~~~----~~~l~ 344 (732)
.....+....... ...|+| +++.++..+.. +.|..+|+.++.. ...+.
T Consensus 136 ----------~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d----g~I~iwd~~~~~~~~~~~~~~~ 201 (753)
T 3jro_A 136 ----------TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD----NLVKIWKYNSDAQTYVLESTLE 201 (753)
T ss_dssp ----------CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETT----SCEEEEEEETTTTEEEEEEEEC
T ss_pred ----------cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECC----CeEEEEeccCCcccceeeeeec
Confidence 1112222211111 124677 56766655443 3477777765531 12222
Q ss_pred cCCCCCceeEEEEecC---CEEEEEEecCCeeEEEEEeCCCCcee--eec-cc--ccceeeEeecccCCcEEEEEEecCC
Q 004766 345 PEAERDVLESATAVNL---NQMIVSYLSDVKYVLQIRDLKNGSLL--HQL-PI--EIGSVNAISARREDSVVFISFTSFL 416 (732)
Q Consensus 345 ~~~~~~~l~~~~~~~~---~~l~~~~~~~g~~~l~~~d~~~g~~~--~~l-~~--~~g~v~~~~~s~d~~~l~~~~ss~~ 416 (732)
.+. ..+..+.++++ +.++++...++ .|++||+.+++.. ..+ .. ..+.+..+.+++++..++.. +.
T Consensus 202 ~h~--~~V~~l~~sp~~~~~~~l~s~s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~-s~-- 274 (753)
T 3jro_A 202 GHS--DWVRDVAWSPTVLLRSYLASVSQDR--TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS-GG-- 274 (753)
T ss_dssp CCS--SCEEEEEECCCCSSSEEEEEEESSS--CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE-CS--
T ss_pred CCC--CcEEEEEeccCCCCCCEEEEEecCC--EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE-cC--
Confidence 333 56888999987 68888888775 6888888765321 111 11 24556678888998865433 22
Q ss_pred CCceEEEEECCC
Q 004766 417 IPGIVYQCNLKT 428 (732)
Q Consensus 417 ~p~~~y~~d~~~ 428 (732)
-..++.|++.+
T Consensus 275 -Dg~I~vwd~~~ 285 (753)
T 3jro_A 275 -DNKVTLWKENL 285 (753)
T ss_dssp -SSCEECCBCCS
T ss_pred -CCEEEEEecCC
Confidence 35677777764
No 363
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.87 E-value=6.7e-07 Score=94.15 Aligned_cols=92 Identities=13% Similarity=0.124 Sum_probs=59.2
Q ss_pred EEEecCCeEEEEeCCCC-------CCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeC
Q 004766 308 VIANDDTVFTFLTNKDA-------PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDL 380 (732)
Q Consensus 308 ~~s~dg~~l~~~s~~~~-------~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~ 380 (732)
.+++|++++|+....++ ....|+.+|+++.+....+ +-. . ..++.++++++.++.... ..|.+||.
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i-~~~--~-p~~ia~spdg~~l~v~n~---~~v~v~D~ 332 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARI-PGR--D-ALSMTIDQQRNLMLTLDG---GNVNVYDI 332 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEE-ECT--T-CCEEEEETTTTEEEEECS---SCEEEEEC
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEE-ecC--C-eeEEEECCCCCEEEEeCC---CeEEEEEC
Confidence 57899999987653111 2347999999987633333 332 2 678899986554444443 67999999
Q ss_pred CCC--ceeeecccccceeeEeecccCCc
Q 004766 381 KNG--SLLHQLPIEIGSVNAISARREDS 406 (732)
Q Consensus 381 ~~g--~~~~~l~~~~g~v~~~~~s~d~~ 406 (732)
+++ +.+..+.........+.++|+|.
T Consensus 333 ~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 333 SQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 999 77666532122233566778775
No 364
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.86 E-value=3.1e-06 Score=88.48 Aligned_cols=245 Identities=13% Similarity=0.118 Sum_probs=134.5
Q ss_pred eEEECCCCcEEEEEEec-----cCCceEEEEEEECCCCceeccc-cc-------ceeeeeEEEEeCCcEEEEEEecCCCC
Q 004766 136 KVSVSEDAKYLAYALSY-----SGSDWATIKLMRIEDQIVEADA-LS-------WFKFSSIAWTHDSKGFFYSRYPAPKE 202 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~-----~G~e~~~i~v~dl~~g~~~~~~-~~-------~~~~~~~~WspDg~~l~y~~~~~~~~ 202 (732)
.+.+||||++|..+... .|.....|.++|.++++.+... .. +.....+++||||+++|++...
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~---- 157 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS---- 157 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----
Confidence 38999999987665421 2223457999999999865321 11 1123679999999998876421
Q ss_pred CCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCe-eE----EEeEEecCCcEEEEEEecCCcceEEEEEEeCC
Q 004766 203 GKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPK-YI----FSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS 277 (732)
Q Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~-~~----~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 277 (732)
....|.++++.+......+ ..+.... +- .-+..++||+.+++....... + .+..
T Consensus 158 -------------~~~~VsVID~~t~~vv~tI--~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~----v--~~~~ 216 (386)
T 3sjl_D 158 -------------PAPAVGVVDLEGKAFKRML--DVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGT----P--EITH 216 (386)
T ss_dssp -------------SSCEEEEEETTTTEEEEEE--ECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSC----C--EEEE
T ss_pred -------------CCCeEEEEECCCCcEEEEE--ECCCcceeecCCCceeEEECCCCCEEEEECCCCCe----E--EEee
Confidence 1246778887765322111 1110000 00 013667788776655432111 1 0100
Q ss_pred CCCCCcccccccCCCCCcEEeeecccceEEEEE-ecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC---------
Q 004766 278 ALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIA-NDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA--------- 347 (732)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~--------- 347 (732)
+.. +.. . ...+.. ...|. ++| +++|.+.. .+++.+|+.+.. .+ ++..-
T Consensus 217 ~~~-----~~~---~--~~~~~~-----~~~~~~~dG-~~~~vs~~----g~V~v~d~~~~~-~~-v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 217 TEV-----FHP---E--DEFLIN-----HPAYSQKAG-RLVWPTYT----GKIHQIDLSSGD-AK-FLPAVEALTEAERA 274 (386)
T ss_dssp CCC-----CSC---T--TSCBCS-----CCEEETTTT-EEEEEBTT----SEEEEEECTTSS-CE-ECCCEESSCHHHHH
T ss_pred cce-----ecc---c--cccccc-----cceeEcCCC-cEEEEeCC----CEEEEEECCCCc-ce-eecceecccccccc
Confidence 100 000 0 000100 01243 455 66666662 479999987654 11 11100
Q ss_pred CC---CceeEEEEecC-CEEEEEEecC-------CeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCC
Q 004766 348 ER---DVLESATAVNL-NQMIVSYLSD-------VKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFL 416 (732)
Q Consensus 348 ~~---~~l~~~~~~~~-~~l~~~~~~~-------g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~ 416 (732)
.. ...+.+.++++ +++|+....+ .-.+|+++|+++++.+++|.++. .+.++.+++|++.++|..+.
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~-- 351 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALST-- 351 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEET--
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcC--
Confidence 00 01223555653 6788876532 23689999999999888887653 34467889999744444332
Q ss_pred CCceEEEEECCCCC
Q 004766 417 IPGIVYQCNLKTET 430 (732)
Q Consensus 417 ~p~~~y~~d~~~~~ 430 (732)
....+..+|..+++
T Consensus 352 ~~~~VsViD~~t~k 365 (386)
T 3sjl_D 352 GDKTLYIHDAESGE 365 (386)
T ss_dssp TTTEEEEEETTTCC
T ss_pred CCCeEEEEECCCCc
Confidence 24689999999886
No 365
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.86 E-value=3.6e-09 Score=117.62 Aligned_cols=133 Identities=17% Similarity=0.159 Sum_probs=87.4
Q ss_pred EccCCCeeEEEEEEEcCCCC-CCCCccEEEEEcCCCCccCC---CCc----ChhHHHHHHhcCcEEEEEcccCCC-CCch
Q 004766 457 PSKDGSTKIPMFIVSKKNIK-LDGSHPCLLYGYGGFNISVT---PSF----SVSRTILMRHLGAVFCIANIRGGG-EYGE 527 (732)
Q Consensus 457 ~s~dG~~~i~~~~~~p~~~~-~~~~~P~vv~~hG~~~~~~~---~~~----~~~~~~~l~~~G~~v~~~~~rG~g-~~g~ 527 (732)
.+.|. +.+.++.|+... .+++.|+||++|||...... ..+ ......+..+.|++|+.+|||.+. +|..
T Consensus 76 ~sedc---l~lnv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~ 152 (579)
T 2bce_A 76 GNEDC---LYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLS 152 (579)
T ss_dssp SCSCC---CEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCC
T ss_pred CCCCC---CEEEEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCc
Confidence 34555 445566786542 34678999999999532211 111 111134445468999999999532 2111
Q ss_pred hHHhccccc-CCccHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhh--CCCeeeEEEEcCCcc
Q 004766 528 EWHKGGALA-KKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGVM 596 (732)
Q Consensus 528 ~~~~~~~~~-~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p~~ 596 (732)
..... .+...+.|+.+|++|+.++- -.||+||.|+|+|+||.+++.++.. ...+|+++|+.+|..
T Consensus 153 ----~~~~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 153 ----TGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp ----CSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred ----CCCCCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 11111 12235899999999998762 3699999999999999999988764 356999999988753
No 366
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.85 E-value=5.7e-07 Score=93.20 Aligned_cols=242 Identities=11% Similarity=0.068 Sum_probs=141.9
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
..+..+.|||||++|+-.. ....|++++...+....... .........|+++++.|+....+.
T Consensus 87 ~~V~~~~~s~dg~~l~s~~-----~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~----------- 150 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGS-----WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK----------- 150 (340)
T ss_dssp SCEEEEEECTTSSEEEEEE-----TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS-----------
T ss_pred CCEEEEEECCCCCEEEEEc-----ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCC-----------
Confidence 4577899999999988553 22478999998876432211 111235678899999887765332
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
.+.+|++.... ........+......+.+++++...++.+.... ..+.++|+.++.
T Consensus 151 --------~~~~~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d---~~i~i~d~~~~~---------- 206 (340)
T 4aow_A 151 --------TIKLWNTLGVC---KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWD---KLVKVWNLANCK---------- 206 (340)
T ss_dssp --------CEEEECTTSCE---EEEECSSSCSSCEEEEEECSCSSSCEEEEEETT---SCEEEEETTTTE----------
T ss_pred --------eEEEEEeCCCc---eEEEEeccccCcccceEEccCCCCcEEEEEcCC---CEEEEEECCCCc----------
Confidence 46667665332 122222222334556788888765433332222 337788887632
Q ss_pred CCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEec
Q 004766 291 GLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLS 369 (732)
Q Consensus 291 ~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~ 369 (732)
....+........ ..|+|+|+.|+..+. +..|..+|+.+......+ .. ...+..+.+++++.++... .
T Consensus 207 ---~~~~~~~h~~~v~~~~~s~~~~~l~s~s~----Dg~i~iwd~~~~~~~~~~-~~--~~~v~~~~~~~~~~~~~~~-~ 275 (340)
T 4aow_A 207 ---LKTNHIGHTGYLNTVTVSPDGSLCASGGK----DGQAMLWDLNEGKHLYTL-DG--GDIINALCFSPNRYWLCAA-T 275 (340)
T ss_dssp ---EEEEECCCSSCEEEEEECTTSSEEEEEET----TCEEEEEETTTTEEEEEE-EC--SSCEEEEEECSSSSEEEEE-E
T ss_pred ---eeeEecCCCCcEEEEEECCCCCEEEEEeC----CCeEEEEEeccCceeeee-cC--CceEEeeecCCCCceeecc-C
Confidence 1222222111111 248899887765443 346888998876533333 22 2457778888855565554 4
Q ss_pred CCeeEEEEEeCCCCceeeeccc---------ccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 370 DVKYVLQIRDLKNGSLLHQLPI---------EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~~~~~l~~---------~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+ ..|++||+.++.....+.. ....|..+++++|++.|+ +.+. -..++.||+.+|+
T Consensus 276 d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~-sgs~---Dg~v~iW~~~tGt 339 (340)
T 4aow_A 276 G--PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF-AGYT---DNLVRVWQVTIGT 339 (340)
T ss_dssp T--TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEE-EEET---TSCEEEEEEEC--
T ss_pred C--CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEE-EEeC---CCEEEEEeCCCcC
Confidence 4 3689999986654333321 244577888999998654 3333 2468888988874
No 367
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.85 E-value=4.2e-07 Score=98.28 Aligned_cols=246 Identities=10% Similarity=0.017 Sum_probs=143.5
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCC----------Cceec-ccccceeeeeEEEEeCCc-EEEEEEecCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED----------QIVEA-DALSWFKFSSIAWTHDSK-GFFYSRYPAPK 201 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~----------g~~~~-~~~~~~~~~~~~WspDg~-~l~y~~~~~~~ 201 (732)
+..++|+|++..++++.... ..|++||+.+ +..+. ..........++|+|+++ .|+...
T Consensus 131 v~~l~~~p~~~~~lat~~~d----g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~----- 201 (430)
T 2xyi_A 131 VNRARYMPQNACVIATKTPS----SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS----- 201 (430)
T ss_dssp CSEEEEETTEEEEEEEECSS----SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC-----
T ss_pred EEEEEECCCCCcEEEEECCC----CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe-----
Confidence 55788999855444444333 3699999976 22211 111122347899999998 555442
Q ss_pred CCCCCCCCCcccCCcccEEEEEECCCCCCCC-----eEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeC
Q 004766 202 EGKDMDAGTETDSNLYHEFYYHFLGTKQSED-----ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDL 276 (732)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-----~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~ 276 (732)
....|.+|++.++.... ...+. .+...+..++|+|++..++++.... ..|+++|+
T Consensus 202 --------------~dg~i~vwd~~~~~~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~s~~~d----g~i~i~d~ 261 (430)
T 2xyi_A 202 --------------DDHTICLWDINATPKEHRVIDAKNIFT--GHTAVVEDVAWHLLHESLFGSVADD----QKLMIWDT 261 (430)
T ss_dssp --------------TTSCEEEEETTSCCBGGGEEECSEEEC--CCSSCEEEEEECSSCTTEEEEEETT----SEEEEEET
T ss_pred --------------CCCeEEEEeCCCCCCCCceeccceeec--CCCCCEeeeEEeCCCCCEEEEEeCC----CeEEEEEC
Confidence 22358889987643221 12222 2233467899999655554444322 35888898
Q ss_pred CCCCCCcccccccCCCCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-CceEeccCCCCCceeE
Q 004766 277 SALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEAERDVLES 354 (732)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~ 354 (732)
.++.. ..+...+..... .....|+|+++.+++....+ ..|..+|+.+.. ....+..+. ..+..
T Consensus 262 ~~~~~----------~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d---g~v~vwd~~~~~~~~~~~~~h~--~~v~~ 326 (430)
T 2xyi_A 262 RNNNT----------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD---KTVALWDLRNLKLKLHSFESHK--DEIFQ 326 (430)
T ss_dssp TCSCS----------SSCSEEEECCSSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCTTSCSEEEECCS--SCEEE
T ss_pred CCCCC----------CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC---CeEEEEeCCCCCCCeEEeecCC--CCEEE
Confidence 76320 112223322211 12235899888766655443 468889987743 234444443 56888
Q ss_pred EEEecCC-EEEEEEecCCeeEEEEEeCCCC--------------ceeeecccccceeeEeecccCCcEEEEEEecCCCCc
Q 004766 355 ATAVNLN-QMIVSYLSDVKYVLQIRDLKNG--------------SLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPG 419 (732)
Q Consensus 355 ~~~~~~~-~l~~~~~~~g~~~l~~~d~~~g--------------~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~ 419 (732)
+.|++++ .++++...++ .|.+||+... +.+..+......+..+.++++++.++++.+. -.
T Consensus 327 i~~sp~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~---dg 401 (430)
T 2xyi_A 327 VQWSPHNETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSE---DN 401 (430)
T ss_dssp EEECSSCTTEEEEEETTS--CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEET---TS
T ss_pred EEECCCCCCEEEEEeCCC--cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEEC---CC
Confidence 9999854 5788877774 6888898642 1112222224557788899988855555443 25
Q ss_pred eEEEEECCC
Q 004766 420 IVYQCNLKT 428 (732)
Q Consensus 420 ~~y~~d~~~ 428 (732)
.+..+++..
T Consensus 402 ~i~iw~~~~ 410 (430)
T 2xyi_A 402 IMQVWQMAE 410 (430)
T ss_dssp EEEEEEECH
T ss_pred CEEEeEccc
Confidence 677777654
No 368
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.85 E-value=1.7e-06 Score=88.25 Aligned_cols=231 Identities=11% Similarity=0.069 Sum_probs=141.3
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc---eecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI---VEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~---~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
.+..+.|||||++|+.... + ..|++|++.... .+.. .........+.| +++.|+....+
T Consensus 61 ~v~~~~~~~~~~~l~~~~~-d----g~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d---------- 123 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGK-D----TMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWD---------- 123 (313)
T ss_dssp CEEEEEEETTTTEEEEEET-T----SCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETT----------
T ss_pred cEEEEEECCCCCEEEEecC-C----CeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCC----------
Confidence 3678999999999987642 2 368889987643 1111 111112356777 67777766432
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec-CCcEEEEEEecCCcceEEEEEEeCCCCCCCccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
..|.+|+.+ .....+.. +......+.++| ++++++....++ .+.++|....
T Consensus 124 ---------~~i~~~d~~----~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~-------- 175 (313)
T 3odt_A 124 ---------KTAKVWKEG----SLVYNLQA--HNASVWDAKVVSFSENKFLTASADK-----TIKLWQNDKV-------- 175 (313)
T ss_dssp ---------SEEEEEETT----EEEEEEEC--CSSCEEEEEEEETTTTEEEEEETTS-----CEEEEETTEE--------
T ss_pred ---------CCEEEEcCC----cEEEeccc--CCCceeEEEEccCCCCEEEEEECCC-----CEEEEecCce--------
Confidence 357788722 12222322 233456788888 899887665433 3677773321
Q ss_pred ccCCCCCcEEeeecccce--EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEE
Q 004766 288 KRDGLLPFVKLIDGFDAQ--YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIV 365 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~--~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~ 365 (732)
...+....... ...|+|++. ++..+. ...|..+|+.+++....+..+. ..+..+.+++++. ++
T Consensus 176 -------~~~~~~~~~~~i~~~~~~~~~~-~~~~~~----dg~i~i~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~-l~ 240 (313)
T 3odt_A 176 -------IKTFSGIHNDVVRHLAVVDDGH-FISCSN----DGLIKLVDMHTGDVLRTYEGHE--SFVYCIKLLPNGD-IV 240 (313)
T ss_dssp -------EEEECSSCSSCEEEEEEEETTE-EEEEET----TSEEEEEETTTCCEEEEEECCS--SCEEEEEECTTSC-EE
T ss_pred -------EEEEeccCcccEEEEEEcCCCe-EEEccC----CCeEEEEECCchhhhhhhhcCC--ceEEEEEEecCCC-EE
Confidence 12222111111 224888876 444332 3478999998876444443343 5688899998664 55
Q ss_pred EEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 366 SYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 366 ~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+...+ ..|++||+.+++....+..+...+..+.+++++. ++ +.++ -..++.||+.+++
T Consensus 241 ~~~~d--g~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~-~~~~---dg~i~iw~~~~~~ 298 (313)
T 3odt_A 241 SCGED--RTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-II-VGSS---DNLVRIFSQEKSR 298 (313)
T ss_dssp EEETT--SEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EE-EEET---TSCEEEEESCGGG
T ss_pred EEecC--CEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EE-EEeC---CCcEEEEeCCCCc
Confidence 55666 4799999988887677776666788888999987 33 3222 3578889987663
No 369
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.84 E-value=5.9e-07 Score=106.42 Aligned_cols=208 Identities=11% Similarity=0.012 Sum_probs=126.6
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
.+..++|||||++||.... ..+|+|||..+++.+........+..++|+| |+.|+....
T Consensus 19 ~V~~lafspdg~~lAsgs~-----Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~--------------- 77 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATV-----TGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINA--------------- 77 (902)
T ss_dssp CEEEEEEETTTTEEEEEET-----TSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEET---------------
T ss_pred CcEEEEECCCCCEEEEEeC-----CCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEEC---------------
Confidence 3668999999999997642 2489999998877543222222357899999 886665543
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
...|.+|++.++.. +..+.. ...+..++|+|||++|+....++ .|.++|+.++... .+.. .
T Consensus 78 ----D~~v~lWd~~~~~~--~~~~~~---~~~V~~v~~sp~g~~l~sgs~dg-----~V~lwd~~~~~~~--~~~i---~ 138 (902)
T 2oaj_A 78 ----KDTVYVLSLYSQKV--LTTVFV---PGKITSIDTDASLDWMLIGLQNG-----SMIVYDIDRDQLS--SFKL---D 138 (902)
T ss_dssp ----TCEEEEEETTTCSE--EEEEEC---SSCEEEEECCTTCSEEEEEETTS-----CEEEEETTTTEEE--EEEE---C
T ss_pred ----cCeEEEEECCCCcE--EEEEcC---CCCEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCccc--ccee---c
Confidence 24699999987532 222322 23467899999999998766443 3788898764210 0000 0
Q ss_pred CCc---EEeeeccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccC----------------CCCCce
Q 004766 293 LPF---VKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPE----------------AERDVL 352 (732)
Q Consensus 293 ~~~---~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~----------------~~~~~l 352 (732)
..+ ..+..... .....|+|++..+++.... +..+ .+|+.++.....+..+ .....+
T Consensus 139 ~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~---dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V 214 (902)
T 2oaj_A 139 NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE---YVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKV 214 (902)
T ss_dssp CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS---SCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCE
T ss_pred cccccccccccCCCCeEEEEEccCCCCEEEEEeC---CCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCe
Confidence 000 00000001 1122588865444444433 3467 8999876533333322 001458
Q ss_pred eEEEEecCCEEEEEEecCCeeEEEEEeCCCCcee
Q 004766 353 ESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLL 386 (732)
Q Consensus 353 ~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~ 386 (732)
..+.|++++.++++...|+ .|.+||+.+|+.+
T Consensus 215 ~~v~fspdg~~lasgs~Dg--~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 215 IQSLYHPNSLHIITIHEDN--SLVFWDANSGHMI 246 (902)
T ss_dssp EEEEECTTSSEEEEEETTC--CEEEEETTTCCEE
T ss_pred EEEEEcCCCCEEEEEECCC--eEEEEECCCCcEE
Confidence 8899998777888888885 6899999888754
No 370
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.84 E-value=7.6e-09 Score=115.60 Aligned_cols=117 Identities=18% Similarity=0.145 Sum_probs=80.7
Q ss_pred CCCccEEEEEcCCCCc---cCCCCcChhHHHHHHhcCcEEEEEcccCC-CCCc---hhHHh-cccccCCccHHHHHHHHH
Q 004766 478 DGSHPCLLYGYGGFNI---SVTPSFSVSRTILMRHLGAVFCIANIRGG-GEYG---EEWHK-GGALAKKQNCFDDFISAS 549 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~---~~~~~~~~~~~~~l~~~G~~v~~~~~rG~-g~~g---~~~~~-~~~~~~~~~~~~D~~~~~ 549 (732)
+++.|+||++|||... ...+.|... .++++.|++|+.+|||-| -||. ..+.. ......+...+.|+++|+
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~--~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al 215 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNAD--IMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAI 215 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCH--HHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCch--hhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHH
Confidence 4678999999998533 222334432 344447999999999932 1221 11110 011122334689999999
Q ss_pred HHHHHcC---CCCCCcEEEEecChhHHHHHHHHhh--CCCeeeEEEEcCCcc
Q 004766 550 EYLISAG---YTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGVM 596 (732)
Q Consensus 550 ~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p~~ 596 (732)
+|+.++- -.||+||.|+|+|+||.+++.++.. ...+|+++|+.+|..
T Consensus 216 ~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 216 RWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 9999872 3599999999999999999888875 236999999998864
No 371
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.83 E-value=1.2e-06 Score=91.00 Aligned_cols=244 Identities=11% Similarity=0.032 Sum_probs=131.2
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc--eec---ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI--VEA---DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~--~~~---~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~ 207 (732)
.+..+.|||+ +||-.. ...+|++||+.++. .+. ..........++|+||++.|+....+.
T Consensus 16 ~v~~~~~s~~--~las~~-----~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~-------- 80 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGS-----TDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS-------- 80 (330)
T ss_dssp CEEEEEEETT--EEEEEE-----SSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS--------
T ss_pred ceeeeccCCC--EEEEEc-----CCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC--------
Confidence 3567889998 555332 22479999998764 221 110222357899999999888765432
Q ss_pred CCCcccCCcccEEEEEECCCCCC---CCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQS---EDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~---~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
.|.+|++..... ....+.....+...+..++|||||++|+..+.++. +.++|+......
T Consensus 81 -----------~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~-----v~iwd~~~~~~~-- 142 (330)
T 2hes_X 81 -----------TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKS-----VWIWETDESGEE-- 142 (330)
T ss_dssp -----------CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSC-----EEEEECCTTCCC--
T ss_pred -----------cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCE-----EEEEeccCCCCC--
Confidence 477787743211 11122222223345678999999999887664433 777887431100
Q ss_pred cccccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC--CceEeccCCCCCceeEEEEecC-
Q 004766 285 GFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN--DWFEVIPEAERDVLESATAVNL- 360 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~l~~~~~~~~- 360 (732)
......+....... ...|+|++..|+..+.+ ..|..+|+.++. ....+..+. ..+..+.++++
T Consensus 143 -------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D----~~i~iW~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~ 209 (330)
T 2hes_X 143 -------YECISVLQEHSQDVKHVIWHPSEALLASSSYD----DTVRIWKDYDDDWECVAVLNGHE--GTVWSSDFDKTE 209 (330)
T ss_dssp -------CEEEEEECCCSSCEEEEEECSSSSEEEEEETT----SCEEEEEEETTEEEEEEEECCCS--SCEEEEEECCSS
T ss_pred -------eEEEEEeccCCCceEEEEECCCCCEEEEEcCC----CeEEEEECCCCCeeEEEEccCCC--CcEEEEEecCCC
Confidence 01111222211111 22589998876654432 245555654432 223343443 56778888875
Q ss_pred -CEEEEEEecCCeeEEEEEeCCCCc--------eeeeccc-ccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 361 -NQMIVSYLSDVKYVLQIRDLKNGS--------LLHQLPI-EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 361 -~~l~~~~~~~g~~~l~~~d~~~g~--------~~~~l~~-~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
...+++...++ .|.+|++.++. ....+.. +...|..+.+++++ ++++.+. -..+..+|..++
T Consensus 210 ~~~~l~s~s~D~--~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~---dg~v~iw~~~~~ 281 (330)
T 2hes_X 210 GVFRLCSGSDDS--TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGA---DGVLAVYEEVDG 281 (330)
T ss_dssp SSCEEEEEETTS--CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEET---TSCEEEEEEETT
T ss_pred CeeEEEEEeCCC--eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeC---CCEEEEEEcCCC
Confidence 45677777775 57777765331 1122222 34556677777544 3333332 245777776655
No 372
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.82 E-value=1.9e-06 Score=93.93 Aligned_cols=244 Identities=12% Similarity=0.100 Sum_probs=144.4
Q ss_pred ECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcc
Q 004766 139 VSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLY 217 (732)
Q Consensus 139 ~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~ 217 (732)
+++++++|+-.. ...+|++||+.+++.+.... .......++|+||+ .|+.... .
T Consensus 128 ~~~~~~~l~sgs-----~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~-------------------d 182 (464)
T 3v7d_B 128 LQFEDNYVITGA-----DDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGST-------------------D 182 (464)
T ss_dssp EEEETTEEEEEE-----TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEET-------------------T
T ss_pred EEECCCEEEEEc-----CCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeC-------------------C
Confidence 444677776553 22479999999998553221 22235789999988 5554432 2
Q ss_pred cEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEe--cCCcEEEEEEecCCcceEEEEEEeCCCCCCCccccccc------
Q 004766 218 HEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVT--EDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR------ 289 (732)
Q Consensus 218 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~S--pDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~------ 289 (732)
..|.+|++.++.. +..+.. +...+..+.++ +++++++..+.++ .+.++|+.++..........
T Consensus 183 g~i~vwd~~~~~~--~~~~~~--h~~~v~~l~~~~~~~~~~l~s~s~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~ 253 (464)
T 3v7d_B 183 RTVRVWDIKKGCC--THVFEG--HNSTVRCLDIVEYKNIKYIVTGSRDN-----TLHVWKLPKESSVPDHGEEHDYPLVF 253 (464)
T ss_dssp SCEEEEETTTTEE--EEEECC--CSSCEEEEEEEESSSCEEEEEEETTS-----CEEEEECCCCCCC------CCSSEEE
T ss_pred CCEEEEECCCCcE--EEEECC--CCCccEEEEEecCCCCCEEEEEcCCC-----cEEEeeCCCCcccccccccCCcceEe
Confidence 3588999876532 223332 23344566666 6888887665433 37777877642110000000
Q ss_pred ---CCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEE
Q 004766 290 ---DGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVS 366 (732)
Q Consensus 290 ---~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~ 366 (732)
...........+.......++++++.++..+.. ..|..+|+.++.....+..+. ..+..+.+++++..+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----~~i~vwd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s 327 (464)
T 3v7d_B 254 HTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD----NTLIVWDVAQMKCLYILSGHT--DRIYSTIYDHERKRCIS 327 (464)
T ss_dssp SCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT----SCEEEEETTTTEEEEEECCCS--SCEEEEEEETTTTEEEE
T ss_pred eccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC----CeEEEEECCCCcEEEEecCCC--CCEEEEEEcCCCCEEEE
Confidence 000000111222223344567888877765543 368889998776444444443 56888999886667777
Q ss_pred EecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 367 YLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 367 ~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
...++ .|++||+.+|+.+..+..+...+..+.++ ++.+ ++.+. -..+..||+.+++
T Consensus 328 g~~dg--~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l-~s~s~---dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 328 ASMDT--TIRIWDLENGELMYTLQGHTALVGLLRLS--DKFL-VSAAA---DGSIRGWDANDYS 383 (464)
T ss_dssp EETTS--CEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEE-EEEET---TSEEEEEETTTCC
T ss_pred EeCCC--cEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEE-EEEeC---CCcEEEEECCCCc
Confidence 77774 68999998888767776566667667665 4443 34333 3578999998774
No 373
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.81 E-value=4.4e-06 Score=85.51 Aligned_cols=254 Identities=12% Similarity=0.040 Sum_probs=143.0
Q ss_pred eEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc---ccceeeeeEEEEeCCcEEEE
Q 004766 118 KVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA---LSWFKFSSIAWTHDSKGFFY 194 (732)
Q Consensus 118 ~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~---~~~~~~~~~~WspDg~~l~y 194 (732)
+.+||.-.+..+ +.++-+.|||++ .||.+.+ .+|+|||+++|+.+... ........++|+|||+.|+.
T Consensus 14 ~rvldap~~~~d--~y~~~l~WS~~~-~lAvg~D------~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~s 84 (318)
T 4ggc_A 14 DRILDAPEIRND--YYLNLVDWSSGN-VLAVALD------NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV 84 (318)
T ss_dssp SEEEECTTCCCC--TTCBCEEECTTS-EEEEEET------TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE
T ss_pred CEEeeCCCCccc--ccceEEEECCCC-EEEEEeC------CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEE
Confidence 445675444322 113457899997 7776642 37999999999855321 12222478999999999887
Q ss_pred EEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEE
Q 004766 195 SRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYC 274 (732)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~ 274 (732)
...+ ..|.+|++.+++. +..+.. +... ...++++++.++..... ..+.++
T Consensus 85 gs~D-------------------g~v~iw~~~~~~~--~~~~~~--h~~~--~~~~~~~~~~l~s~~~~-----~~~~~~ 134 (318)
T 4ggc_A 85 GTSS-------------------AEVQLWDVQQQKR--LRNMTS--HSAR--VGSLSWNSYILSSGSRS-----GHIHHH 134 (318)
T ss_dssp EETT-------------------SEEEEEETTTTEE--EEEEEC--CSSC--EEEEEEETTEEEEEETT-----SEEEEE
T ss_pred EECC-------------------CcEEEeecCCcee--EEEecC--ccce--EEEeecCCCEEEEEecC-----CceEee
Confidence 6543 3688999877532 122222 2222 23567788877654432 234555
Q ss_pred eCCCCCCCcccccccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCC---ceEeccCCCCC
Q 004766 275 DLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND---WFEVIPEAERD 350 (732)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~---~~~l~~~~~~~ 350 (732)
+..... .....+....... ...+.++|+.|+..+. ...|..+|+.+++. ....... ...
T Consensus 135 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~~~~~~~~~~~~~-~~~ 197 (318)
T 4ggc_A 135 DVRVAE------------HHVATLSGHSQEVCGLRWAPDGRHLASGGN----DNLVNVWPSAPGEGGWVPLQTFTQ-HQG 197 (318)
T ss_dssp ETTSSS------------CEEEEEECCSSCEEEEEECTTSSEEEEEET----TSCEEEEESSCBTTBSCCSEEECC-CCS
T ss_pred ecCCCc------------eeEEEEcCccCceEEEEEcCCCCEEEEEec----CcceeEEECCCCcccccceeeecc-cCC
Confidence 554421 1122222222222 2246778877665443 23577888876541 1111111 124
Q ss_pred ceeEEEEecC-CEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 351 VLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 351 ~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.+..+.+.++ ..++..........|.+|+...+....... ....+..+.++++++.+++... ..-..++.+|+.++
T Consensus 198 ~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg--~~d~~i~iwd~~~~ 274 (318)
T 4ggc_A 198 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHG--FAQNQLVIWKYPTM 274 (318)
T ss_dssp CEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEEC--TTTCCEEEEETTTC
T ss_pred ceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEE--cCCCEEEEEECCCC
Confidence 5666777653 445555444444678999987665432222 3344556667788887665432 23467899999887
Q ss_pred C
Q 004766 430 T 430 (732)
Q Consensus 430 ~ 430 (732)
+
T Consensus 275 ~ 275 (318)
T 4ggc_A 275 A 275 (318)
T ss_dssp C
T ss_pred c
Confidence 5
No 374
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.79 E-value=1.2e-07 Score=97.88 Aligned_cols=241 Identities=12% Similarity=-0.006 Sum_probs=132.2
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCce--ec-ccccceeeeeEEEEeC--CcEEEEEEecCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV--EA-DALSWFKFSSIAWTHD--SKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~--~~-~~~~~~~~~~~~WspD--g~~l~y~~~~~~~~~~~ 205 (732)
.-.+..++|||||++||-.. ...+|+|||+.++.. +. .......+..++|+|+ ++.|+-.+.+
T Consensus 13 ~~~V~~v~~s~~g~~lasgs-----~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D------- 80 (316)
T 3bg1_A 13 EDMIHDAQMDYYGTRLATCS-----SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD------- 80 (316)
T ss_dssp -CCEEEEEECGGGCEEEEEE-----TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-------
T ss_pred cCeEEEeeEcCCCCEEEEEe-----CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-------
Confidence 34477899999999988553 224899999988752 11 1111223478999864 7777766533
Q ss_pred CCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecC--CcEEEEEEecCCcceEEEEEEeCCCCCCCc
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTED--GQYLVMCIEENCDPVNKVYYCDLSALPEGL 283 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 283 (732)
..|.+|++.++.......+. .+...+..++|+|+ |.+|+..+.++ .+.++++.++..
T Consensus 81 ------------~~v~iWd~~~~~~~~~~~~~--~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~~~~~~-- 139 (316)
T 3bg1_A 81 ------------RKVIIWREENGTWEKSHEHA--GHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTYTGEGQ-- 139 (316)
T ss_dssp ------------SCEEEECCSSSCCCEEEEEC--CCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEECSSSC--
T ss_pred ------------CEEEEEECCCCcceEEEEcc--CCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEecCCCCC--
Confidence 35888888765322222222 22334567899998 77776554332 266667654210
Q ss_pred ccccccCCCCCcEE--eeeccc--ceEEEEEecC-----------------CeEEEEeCCCCCCceEEEEeCCCCCCce-
Q 004766 284 EGFKKRDGLLPFVK--LIDGFD--AQYEVIANDD-----------------TVFTFLTNKDAPKYKIIRVDLKEPNDWF- 341 (732)
Q Consensus 284 ~~~~~~~~~~~~~~--l~~~~~--~~~~~~s~dg-----------------~~l~~~s~~~~~~~~l~~~d~~~~~~~~- 341 (732)
+.. ...... .....|+|++ +.|+ .... ...|..+|+.+...+.
T Consensus 140 -----------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sgs~---D~~v~lWd~~~~~~~~~ 204 (316)
T 3bg1_A 140 -----------WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFA-SGGC---DNLIKLWKEEEDGQWKE 204 (316)
T ss_dssp -----------EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEE-CCBT---TSBCCEEEECTTSCEEE
T ss_pred -----------cceeeeeccccCCcceEEEccccCCccccccccccCccccceEE-EecC---CCeEEEEEeCCCCccce
Confidence 100 000000 0111355542 2332 2222 2345556665432222
Q ss_pred --EeccCCCCCceeEEEEecCC----EEEEEEecCCeeEEEEEeCCCCc---e-eeecccccceeeEeecccCCcEEEEE
Q 004766 342 --EVIPEAERDVLESATAVNLN----QMIVSYLSDVKYVLQIRDLKNGS---L-LHQLPIEIGSVNAISARREDSVVFIS 411 (732)
Q Consensus 342 --~l~~~~~~~~l~~~~~~~~~----~l~~~~~~~g~~~l~~~d~~~g~---~-~~~l~~~~g~v~~~~~s~d~~~l~~~ 411 (732)
.+..+. ..+..+.+++++ .++++...++ .|.+|++.++. . ...+....+.+..++++|+++.|+..
T Consensus 205 ~~~l~~h~--~~V~~v~~sp~~~~~~~~las~s~D~--~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~ 280 (316)
T 3bg1_A 205 EQKLEAHS--DWVRDVAWAPSIGLPTSTIASCSQDG--RVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVS 280 (316)
T ss_dssp EECCBCCS--SCEEEEECCCCSSCSCCEEEEEETTC--EEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEE
T ss_pred eeecccCC--CceEEEEecCCCCCCCceEEEEcCCC--eEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEE
Confidence 222332 568889988753 6778888884 68889886521 1 12232234567788899999866533
Q ss_pred EecCCCCceEEEEECC
Q 004766 412 FTSFLIPGIVYQCNLK 427 (732)
Q Consensus 412 ~ss~~~p~~~y~~d~~ 427 (732)
+. . ..+..|+..
T Consensus 281 -~~-D--~~v~lw~~~ 292 (316)
T 3bg1_A 281 -GG-D--NKVTLWKES 292 (316)
T ss_dssp -ES-S--SCEEEEEEC
T ss_pred -cC-C--CeEEEEEEC
Confidence 22 1 345555543
No 375
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.79 E-value=2.4e-06 Score=89.72 Aligned_cols=233 Identities=8% Similarity=0.026 Sum_probs=144.9
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
.+..++|||||++||...+ + .++|||+++++.+...... ....+.|+++++.++++..
T Consensus 21 ~V~~v~fs~dg~~la~g~~----~--~~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------------- 78 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILSTL----K--SFEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNYVAFVTG--------------- 78 (355)
T ss_dssp CCCEEEECTTSSEEEEECS----S--EEEEEEETTEEEEEEEECS-CCCEEEECTTSSEEEEECS---------------
T ss_pred ceEEEEECCCCCEEEEEcC----C--EEEEEecCCcceeeeeecC-CeEEEEEcCCCCEEEEEEC---------------
Confidence 3568899999999986532 1 3679999887644221111 2366889999998877632
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
....|.+|++.++.. +..++. ...+..+.+++++. ++.. + ..++++|+.++...
T Consensus 79 ---~d~~v~iWd~~~~~~--~~~~~~---~~~v~~v~~~~~~~--~~~~-~-----~~i~i~d~~~~~~~---------- 132 (355)
T 3vu4_A 79 ---VKEVVHIWDDVKKQD--VSRIKV---DAPVKDLFLSREFI--VVSY-G-----DVISVFKFGNPWKR---------- 132 (355)
T ss_dssp ---STTEEEEEETTTTEE--EEEEEC---SSCEEEEEECSSEE--EEEE-T-----TEEEEEESSTTCCB----------
T ss_pred ---CccEEEEEECCCCcE--EEEEEC---CCceEEEEEcCCEE--EEEE-c-----CEEEEEECCCCcee----------
Confidence 224799999876532 122222 22355778887753 3322 2 34888898874111
Q ss_pred CCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC----------------CceEeccCCCCCceeEEE
Q 004766 293 LPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN----------------DWFEVIPEAERDVLESAT 356 (732)
Q Consensus 293 ~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~----------------~~~~l~~~~~~~~l~~~~ 356 (732)
...+.. ......+++ ..+++.+.. ..+.|..+|+.++. ....+..+. ..+..+.
T Consensus 133 --~~~~~~--~~~~~~~s~--~~la~~sg~--~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~--~~v~~~~ 202 (355)
T 3vu4_A 133 --ITDDIR--FGGVCEFSN--GLLVYSNEF--NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT--NPIKMVR 202 (355)
T ss_dssp --SSCCEE--EEEEEEEET--TEEEEEESS--CTTCEEEEECCC------------------CCEEECCCS--SCEEEEE
T ss_pred --eEEecc--CCceEEEEc--cEEEEeCCC--cCcEEEEEECCCCCccccccccccccccCcccEEEEccC--CceEEEE
Confidence 111111 112334565 566655232 23467888887643 024444443 5688999
Q ss_pred EecCCEEEEEEecCCeeE-EEEEeCCCCceeeeccc--ccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 357 AVNLNQMIVSYLSDVKYV-LQIRDLKNGSLLHQLPI--EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 357 ~~~~~~l~~~~~~~g~~~-l~~~d~~~g~~~~~l~~--~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+++++.++++...++ . |.+||+.+|+.+..+.. ..+.+..+.++|+++.++. .+. -..+..+|+..+
T Consensus 203 ~s~~g~~l~s~s~d~--~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s-~s~---d~~v~iw~~~~~ 272 (355)
T 3vu4_A 203 LNRKSDMVATCSQDG--TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAV-VSD---KWTLHVFEIFND 272 (355)
T ss_dssp ECTTSSEEEEEETTC--SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEE-EET---TCEEEEEESSCC
T ss_pred ECCCCCEEEEEeCCC--CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEE-EEC---CCEEEEEEccCC
Confidence 998778888888884 5 88999998887777762 4667888999999986553 332 257888888654
No 376
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.77 E-value=5.3e-07 Score=97.55 Aligned_cols=205 Identities=10% Similarity=0.016 Sum_probs=119.0
Q ss_pred EEeEEECCCC--cEEEEEEeccCCceEEEEEEECCCCceec---------------------------------------
Q 004766 134 LIKVSVSEDA--KYLAYALSYSGSDWATIKLMRIEDQIVEA--------------------------------------- 172 (732)
Q Consensus 134 ~~~~~~SPDG--~~la~~~~~~G~e~~~i~v~dl~~g~~~~--------------------------------------- 172 (732)
+..+.|+|++ .+|+.+. .+ .+|++||+.++....
T Consensus 96 V~~l~~~~~~~~~~l~s~s-~d----~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
T 3dw8_B 96 INKIRWLPQKNAAQFLLST-ND----KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRR 170 (447)
T ss_dssp CCEEEECCCCSSSEEEEEE-CS----SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEE
T ss_pred eEEEEEcCCCCcceEEEeC-CC----CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceE
Confidence 6689999998 6776553 22 378999987644210
Q ss_pred --ccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEE-----ecCCCCeeE
Q 004766 173 --DALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCW-----KDPEHPKYI 245 (732)
Q Consensus 173 --~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~-----~~~~~~~~~ 245 (732)
..........++|+|||+.|+.. .+ ..|.+|++.+.... ..++ ....+...+
T Consensus 171 ~~~~~h~~~v~~~~~~~~~~~l~s~-~d-------------------~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~v 229 (447)
T 3dw8_B 171 IFANAHTYHINSISINSDYETYLSA-DD-------------------LRINLWHLEITDRS-FNIVDIKPANMEELTEVI 229 (447)
T ss_dssp EECSCCSSCCCEEEECTTSSEEEEE-CS-------------------SEEEEEETTEEEEE-EEEEECCCSSGGGCCCCE
T ss_pred EeccCCCcceEEEEEcCCCCEEEEe-CC-------------------CeEEEEECCCCCce-eeeeecccccccccCcce
Confidence 00111124689999999988764 32 36888888743211 1111 111223456
Q ss_pred EEeEEecCC-cEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeeccc------------c-eEEEEEe
Q 004766 246 FSGHVTEDG-QYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD------------A-QYEVIAN 311 (732)
Q Consensus 246 ~~~~~SpDg-~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------~-~~~~~s~ 311 (732)
..++|+|+| +.|+..+.++ .|.++|+.++... ......+..... . ....|+|
T Consensus 230 ~~~~~~p~~~~~l~s~~~dg-----~i~iwd~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 295 (447)
T 3dw8_B 230 TAAEFHPNSCNTFVYSSSKG-----TIRLCDMRASALC---------DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH 295 (447)
T ss_dssp EEEEECSSCTTEEEEEETTS-----CEEEEETTTCSSS---------CTTCEEECCC-----CCHHHHHTTCEEEEEECT
T ss_pred EEEEECCCCCcEEEEEeCCC-----eEEEEECcCCccc---------cceeeEeccCCCccccccccccCceEEEEEECC
Confidence 789999999 7776665433 3888898774310 000122222111 1 1225899
Q ss_pred cCCeEEEEeCCCCCCceEEEEeCCC-CCCceEeccCCCCC----------c---eeEEEEecCCEEEEEEecCCeeEEEE
Q 004766 312 DDTVFTFLTNKDAPKYKIIRVDLKE-PNDWFEVIPEAERD----------V---LESATAVNLNQMIVSYLSDVKYVLQI 377 (732)
Q Consensus 312 dg~~l~~~s~~~~~~~~l~~~d~~~-~~~~~~l~~~~~~~----------~---l~~~~~~~~~~l~~~~~~~g~~~l~~ 377 (732)
+|+.|+..+. ..|..+|+.+ +.....+..+..-. . +..+.|++++..+++...++ .|++
T Consensus 296 ~g~~l~~~~~-----~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg--~v~i 368 (447)
T 3dw8_B 296 SGRYMMTRDY-----LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNN--FFRM 368 (447)
T ss_dssp TSSEEEEEES-----SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTT--EEEE
T ss_pred CCCEEEEeeC-----CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCC--EEEE
Confidence 9987775433 4688889876 43233333332100 0 12378888766677777774 7899
Q ss_pred EeCCCCce
Q 004766 378 RDLKNGSL 385 (732)
Q Consensus 378 ~d~~~g~~ 385 (732)
||+.+++.
T Consensus 369 wd~~~~~~ 376 (447)
T 3dw8_B 369 FDRNTKRD 376 (447)
T ss_dssp EETTTCCE
T ss_pred EEcCCCcc
Confidence 99987765
No 377
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.77 E-value=2.6e-06 Score=90.61 Aligned_cols=264 Identities=9% Similarity=0.003 Sum_probs=140.8
Q ss_pred ECCCCcEEEEEEeccCCc-eEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcc
Q 004766 139 VSEDAKYLAYALSYSGSD-WATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLY 217 (732)
Q Consensus 139 ~SPDG~~la~~~~~~G~e-~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~ 217 (732)
..||++++ |+.+.+... ...|.++|+++++.+.....+... ++++||||++||.+...... .......
T Consensus 80 p~~~~~~v-yV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~---------~~~G~~~ 148 (426)
T 3c75_H 80 PAPDARRV-YIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFER---------IARGKRT 148 (426)
T ss_dssp CCCCTTEE-EEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEE---------TTEEEEE
T ss_pred CCCCCCEE-EEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccc---------cccCCCC
Confidence 35788874 665543211 168999999999976433223334 89999999999887531000 0000123
Q ss_pred cEEEEEECCCCCCCCeEEEecCCC---CeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCC
Q 004766 218 HEFYYHFLGTKQSEDILCWKDPEH---PKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLP 294 (732)
Q Consensus 218 ~~v~~~~lgt~~~~~~~v~~~~~~---~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 294 (732)
..|..+|..+......+....... ...-..+.+||||++|++..... .+.|.++|+++.+. ...+.. +..
T Consensus 149 ~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~---~~~VsVID~~t~kv-v~~I~v---~g~ 221 (426)
T 3c75_H 149 DYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP---APAVGVVDLEGKTF-DRMLDV---PDC 221 (426)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS---SCEEEEEETTTTEE-EEEEEC---CSE
T ss_pred CEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC---CCeEEEEECCCCeE-EEEEEc---CCc
Confidence 468888877754322222210000 00112578999999997764321 35688999887421 000100 000
Q ss_pred cEEeeecccceEEE-------------------------------------EEecCCeEEEEeCCCCCCceEEEEeCCCC
Q 004766 295 FVKLIDGFDAQYEV-------------------------------------IANDDTVFTFLTNKDAPKYKIIRVDLKEP 337 (732)
Q Consensus 295 ~~~l~~~~~~~~~~-------------------------------------~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 337 (732)
..+.......+.. ++++++++++.+. ..+|+.+|+.+.
T Consensus 222 -~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~----~g~V~ViD~~~~ 296 (426)
T 3c75_H 222 -YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY----TGKIFQADLTAE 296 (426)
T ss_dssp -EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT----TSEEEEEEECSS
T ss_pred -eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC----CCcEEEEeccCC
Confidence 0000000001111 2444455554432 125777777554
Q ss_pred CCceEeccC------CC---C---CceeEEEEecC-CEEEEEEecC-------CeeEEEEEeCCCCceeeecccccceee
Q 004766 338 NDWFEVIPE------AE---R---DVLESATAVNL-NQMIVSYLSD-------VKYVLQIRDLKNGSLLHQLPIEIGSVN 397 (732)
Q Consensus 338 ~~~~~l~~~------~~---~---~~l~~~~~~~~-~~l~~~~~~~-------g~~~l~~~d~~~g~~~~~l~~~~g~v~ 397 (732)
. ..++.. .. . .....+.++++ +++|+..... +...|.++|+++++.+.+|..+.. ..
T Consensus 297 ~--~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~-P~ 373 (426)
T 3c75_H 297 G--ATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE-ID 373 (426)
T ss_dssp C--EEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE-EC
T ss_pred c--eEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCC-cC
Confidence 3 111110 00 0 00112566654 6777765421 246899999999988888876532 44
Q ss_pred EeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 398 AISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 398 ~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.+.+++|++.++|+... ....+..+|+.+++
T Consensus 374 gia~spDg~~~lyv~n~--~s~~VsVID~~t~k 404 (426)
T 3c75_H 374 SINVSQDAEPLLYALSA--GTQTLHIYDAATGE 404 (426)
T ss_dssp EEEECCSSSCEEEEEET--TTTEEEEEETTTCC
T ss_pred eEEEccCCCEEEEEEcC--CCCeEEEEECCCCC
Confidence 67889999834444332 24689999999885
No 378
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.76 E-value=1.2e-06 Score=89.70 Aligned_cols=239 Identities=11% Similarity=-0.007 Sum_probs=135.1
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
..++.|+|||+.|.|+-..++ .|+.++. +|+............+++|++||+ |+.+..
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~----~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~-l~v~~~---------------- 104 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGR----RVLGWRE-DGTVDVLLDATAFTNGNAVDAQQR-LVHCEH---------------- 104 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTT----EEEEEET-TSCEEEEEESCSCEEEEEECTTSC-EEEEET----------------
T ss_pred ccCCeEeCCCCEEEEEECCCC----EEEEEeC-CCCEEEEeCCCCccceeeECCCCC-EEEEEC----------------
Confidence 358999999998888743322 6888898 454322111111246899999998 444421
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCC--eeEEEeEEecCCcEEEEEEec-CC------------cceEEEEEEeCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHP--KYIFSGHVTEDGQYLVMCIEE-NC------------DPVNKVYYCDLSA 278 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~--~~~~~~~~SpDg~~l~~~~~~-~~------------~~~~~l~~~d~~~ 278 (732)
....|++++.. +.. ..+....... .....+.++|||+.. ++... +. .....||.++.++
T Consensus 105 --~~~~v~~~~~~-g~~--~~~~~~~~~~~~~~~~~i~~d~dG~l~-~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~ 178 (305)
T 3dr2_A 105 --GRRAITRSDAD-GQA--HLLVGRYAGKRLNSPNDLIVARDGAIW-FTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG 178 (305)
T ss_dssp --TTTEEEEECTT-SCE--EEEECEETTEECSCCCCEEECTTSCEE-EECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS
T ss_pred --CCCEEEEECCC-CCE--EEEEeccCCCccCCCCCEEECCCCCEE-EeCcCCCccccccccccccccCCCeEEEEcCCC
Confidence 22357777764 221 1222111110 012357899999844 32100 00 1136799999866
Q ss_pred CCCCcccccccCCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCC--CCCceEEEEeCCCCC-CceEeccCCCCCceeE
Q 004766 279 LPEGLEGFKKRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKD--APKYKIIRVDLKEPN-DWFEVIPEAERDVLES 354 (732)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~--~~~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~ 354 (732)
+. +..+. +... .-..|+|||+.||+..... ....+|+++++++.. .-..++.........+
T Consensus 179 g~--------------~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg 243 (305)
T 3dr2_A 179 SP--------------LQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDG 243 (305)
T ss_dssp CC--------------CEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCS
T ss_pred Cc--------------EEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCe
Confidence 43 22332 2221 1235899999888765431 112578888876542 0011221111223456
Q ss_pred EEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEEC
Q 004766 355 ATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNL 426 (732)
Q Consensus 355 ~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~ 426 (732)
+.+.+++.|++.. .+ .|++++.+ |+.+..+..+.+ +..+.++++++.|+++.+. .+|++++
T Consensus 244 i~~d~~G~lwv~~-~~---gv~~~~~~-g~~~~~~~~~~~-~~~~~f~~d~~~L~it~~~-----~l~~~~~ 304 (305)
T 3dr2_A 244 FCVDRGGWLWSSS-GT---GVCVFDSD-GQLLGHIPTPGT-ASNCTFDQAQQRLFITGGP-----CLWMLPL 304 (305)
T ss_dssp EEECTTSCEEECC-SS---EEEEECTT-SCEEEEEECSSC-CCEEEECTTSCEEEEEETT-----EEEEEEC
T ss_pred EEECCCCCEEEec-CC---cEEEECCC-CCEEEEEECCCc-eeEEEEeCCCCEEEEEcCC-----eEEEEEC
Confidence 7777766776654 22 49999985 777677776653 5566667888888876543 6887764
No 379
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.76 E-value=4e-06 Score=88.47 Aligned_cols=77 Identities=10% Similarity=0.043 Sum_probs=51.3
Q ss_pred EEEecCCeEEEEeCCCC------CCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCE-EEEEEecCCeeEEEEEeC
Q 004766 308 VIANDDTVFTFLTNKDA------PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDL 380 (732)
Q Consensus 308 ~~s~dg~~l~~~s~~~~------~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~-l~~~~~~~g~~~l~~~d~ 380 (732)
.+++||+++|+..+... ....|+.+|+++.+....+ +-. ....++.+++|++ +++.... +...|.++|.
T Consensus 273 ~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i-~~g--~~p~~i~~s~Dg~~~l~v~~~-~~~~V~ViD~ 348 (373)
T 2mad_H 273 AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI-SLG--HDVDAISVAQDGGPDLYALSA-GTEVLHIYDA 348 (373)
T ss_pred EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE-ECC--CCcCeEEECCCCCeEEEEEcC-CCCeEEEEEC
Confidence 47889999998764321 2357999999987633333 322 2356788888655 5555442 2358999999
Q ss_pred CCCceeee
Q 004766 381 KNGSLLHQ 388 (732)
Q Consensus 381 ~~g~~~~~ 388 (732)
++++.++.
T Consensus 349 ~t~~vv~~ 356 (373)
T 2mad_H 349 GAGDQDQS 356 (373)
T ss_pred CCCCEEee
Confidence 98887666
No 380
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.75 E-value=9.7e-08 Score=100.97 Aligned_cols=212 Identities=8% Similarity=-0.026 Sum_probs=115.1
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc----eecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI----VEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~----~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
...+..+.|||||++|+.... + .+|++||+.+++ .............++|+||++.|+....+.
T Consensus 55 ~~~v~~~~~s~~~~~l~s~s~-d----~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------- 122 (377)
T 3dwl_C 55 DKIVTCVDWAPKSNRIVTCSQ-D----RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR------- 122 (377)
T ss_dssp SSCEEEEEECTTTCCEEEEET-T----SSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS-------
T ss_pred CceEEEEEEeCCCCEEEEEeC-C----CeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCC-------
Confidence 345778999999999886642 2 369999999877 221111222357899999999888876432
Q ss_pred CCCCcccCCcccEEEEEECCCCCCC-CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSE-DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG 285 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~-~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 285 (732)
.|.+|++.++... ....+..+ +...+..++|+|||++|+..+.++. +.++|+.........
T Consensus 123 ------------~i~iwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~d~~-----i~iwd~~~~~~~~~~ 184 (377)
T 3dwl_C 123 ------------VISVCYFEQENDWWVSKHLKRP-LRSTILSLDWHPNNVLLAAGCADRK-----AYVLSAYVRDVDAKP 184 (377)
T ss_dssp ------------CEEECCC-----CCCCEEECSS-CCSCEEEEEECTTSSEEEEEESSSC-----EEEEEECCSSCC-CC
T ss_pred ------------eEEEEEECCcccceeeeEeecc-cCCCeEEEEEcCCCCEEEEEeCCCE-----EEEEEEEecccCCCc
Confidence 4778888765421 11222221 3345678999999999887765433 667776432100000
Q ss_pred -ccccCCCCCcEEeee--cccceE--EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCC----ceEeccCCCCCceeEEE
Q 004766 286 -FKKRDGLLPFVKLID--GFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND----WFEVIPEAERDVLESAT 356 (732)
Q Consensus 286 -~~~~~~~~~~~~l~~--~~~~~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~----~~~l~~~~~~~~l~~~~ 356 (732)
....+...+...+.. +....+ ..|+|+|+.|+..+.. ..|..+|+.++.. ...+..+. ..+..+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~--~~v~~~~ 258 (377)
T 3dwl_C 185 EASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHD----SSVTIAYPSAPEQPPRALITVKLSQ--LPLRSLL 258 (377)
T ss_dssp CSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETT----TEEC-CEECSTTSCEEECCCEECSS--SCEEEEE
T ss_pred cccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCC----CcEEEEECCCCCCcceeeEeecCCC--CceEEEE
Confidence 000000001111221 111112 2589999877765542 3677788877763 23333333 5678899
Q ss_pred EecCCEEEEEEecCCeeEEEEEeCC
Q 004766 357 AVNLNQMIVSYLSDVKYVLQIRDLK 381 (732)
Q Consensus 357 ~~~~~~l~~~~~~~g~~~l~~~d~~ 381 (732)
+++++.+++....++ +.+|+..
T Consensus 259 ~s~~~~~l~~~~~~~---~~~~~~~ 280 (377)
T 3dwl_C 259 WANESAIVAAGYNYS---PILLQGN 280 (377)
T ss_dssp EEETTEEEEEESSSS---EEEECCC
T ss_pred EcCCCCEEEEEcCCc---EEEEEeC
Confidence 998778777776553 4466654
No 381
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.72 E-value=3e-08 Score=110.47 Aligned_cols=126 Identities=21% Similarity=0.221 Sum_probs=84.3
Q ss_pred EEEEEEEcCCCC---CCCCccEEEEEcCCCCccCC-CCcChhHHHHHHhcCcEEEEEcccCCC-CCchhHHhcccccCCc
Q 004766 465 IPMFIVSKKNIK---LDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGG-EYGEEWHKGGALAKKQ 539 (732)
Q Consensus 465 i~~~~~~p~~~~---~~~~~P~vv~~hG~~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG~g-~~g~~~~~~~~~~~~~ 539 (732)
+.+.++.|+... .+++.|+||++|||...... ..+.. ..+....|++|+.+|||.+. +|... ........
T Consensus 112 L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~---~~~~~~~n 186 (574)
T 3bix_A 112 LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLST---GDQAAKGN 186 (574)
T ss_dssp CEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCC---SSSSCCCC
T ss_pred CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcC---CCCCCCCc
Confidence 556677786532 23568999999998433222 23443 23444347999999999542 11100 00011233
Q ss_pred cHHHHHHHHHHHHHHcC---CCCCCcEEEEecChhHHHHHHHHhhCC---CeeeEEEEcCCc
Q 004766 540 NCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRP---DLFGCALAHVGV 595 (732)
Q Consensus 540 ~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~p~ 595 (732)
..+.|..+|++|+.++- -.||+||.|+|.|+||.+++.++.... .+|+++|+.+|.
T Consensus 187 ~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 187 YGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 46899999999999862 269999999999999999998887532 689999998863
No 382
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.71 E-value=1.8e-06 Score=90.06 Aligned_cols=241 Identities=7% Similarity=-0.044 Sum_probs=127.7
Q ss_pred EECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcc
Q 004766 138 SVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLY 217 (732)
Q Consensus 138 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~ 217 (732)
.+++|+++|+-.. ...+|++||+++|+.+..... .....+.|+|+ ++..+.+.. ..-....
T Consensus 43 ~~~~d~~~l~sg~-----~Dg~v~iwd~~~~~~~~~~~~-~~v~~~~~~~~---~~s~s~D~~----------i~~w~~~ 103 (343)
T 3lrv_A 43 SMYYDKWVCMCRC-----EDGALHFTQLKDSKTITTITT-PNPRTGGEHPA---IISRGPCNR----------LLLLYPG 103 (343)
T ss_dssp SSSEEEEEEEEEE-----ETTEEEEEEESSSSCEEEEEE-ECCCTTCCCCS---EEEECSTTE----------EEEEETT
T ss_pred hhcCCCCEEEEEC-----CCCcEEEEECCCCcEEEEEec-CCceeeeeCCc---eEEecCCCe----------EEEEEcc
Confidence 4667888777543 224899999999885432111 12245566666 332221110 0000001
Q ss_pred cEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec--CCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCc
Q 004766 218 HEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE--DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPF 295 (732)
Q Consensus 218 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp--Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 295 (732)
..+..+++.++.. +..+.. .+...+..+.++| +|++++..+.++ .+.++|+.++. ..
T Consensus 104 ~~~~~~~~~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~s~dg-----~i~~wd~~~~~-------------~~ 162 (343)
T 3lrv_A 104 NQITILDSKTNKV--LREIEV-DSANEIIYMYGHNEVNTEYFIWADNRG-----TIGFQSYEDDS-------------QY 162 (343)
T ss_dssp TEEEEEETTTCCE--EEEEEC-CCSSCEEEEECCC---CCEEEEEETTC-----CEEEEESSSSC-------------EE
T ss_pred CceEEeecCCcce--eEEeec-CCCCCEEEEEcCCCCCCCEEEEEeCCC-----cEEEEECCCCc-------------EE
Confidence 1233344433321 111211 1123456899999 999987665433 38888988742 11
Q ss_pred EEeeeccc--ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCc-eEeccCCCCCceeEEEEecCCEEEEEEecCCe
Q 004766 296 VKLIDGFD--AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW-FEVIPEAERDVLESATAVNLNQMIVSYLSDVK 372 (732)
Q Consensus 296 ~~l~~~~~--~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~ 372 (732)
........ .....|+|+|..|+..+. +..|..+|+.++... ..+.. .....+..+.+++++..+++..++
T Consensus 163 ~~~~~~~~~~i~~~~~~pdg~~lasg~~----dg~i~iwd~~~~~~~~~~~~~-~h~~~v~~l~fs~~g~~l~s~~~~-- 235 (343)
T 3lrv_A 163 IVHSAKSDVEYSSGVLHKDSLLLALYSP----DGILDVYNLSSPDQASSRFPV-DEEAKIKEVKFADNGYWMVVECDQ-- 235 (343)
T ss_dssp EEECCCSSCCCCEEEECTTSCEEEEECT----TSCEEEEESSCTTSCCEECCC-CTTSCEEEEEECTTSSEEEEEESS--
T ss_pred EEEecCCCCceEEEEECCCCCEEEEEcC----CCEEEEEECCCCCCCccEEec-cCCCCEEEEEEeCCCCEEEEEeCC--
Confidence 11111111 122358999886664332 346888999887643 33433 123678899999876666666643
Q ss_pred eEEEEEeCCCCceeeeccc---ccceee--EeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 373 YVLQIRDLKNGSLLHQLPI---EIGSVN--AISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 373 ~~l~~~d~~~g~~~~~l~~---~~g~v~--~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.|.+||+.+++....+.. +...+. .+.+++++..++....+ . ..+..|+..++
T Consensus 236 -~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~-d--~~i~v~~~~~~ 293 (343)
T 3lrv_A 236 -TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNE-S--NSLTIYKFDKK 293 (343)
T ss_dssp -BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETT-T--TEEEEEEECTT
T ss_pred -eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCC-C--CcEEEEEEccc
Confidence 799999987765444432 112222 47788999866543221 2 24555555443
No 383
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.70 E-value=1.1e-06 Score=92.72 Aligned_cols=212 Identities=9% Similarity=0.008 Sum_probs=106.5
Q ss_pred eEEECCCCcE-EEEEEecc-----CC----ceEEEEEEECC-CCceecc-cc----cceeeeeEEEEeCCcEEEEEEecC
Q 004766 136 KVSVSEDAKY-LAYALSYS-----GS----DWATIKLMRIE-DQIVEAD-AL----SWFKFSSIAWTHDSKGFFYSRYPA 199 (732)
Q Consensus 136 ~~~~SPDG~~-la~~~~~~-----G~----e~~~i~v~dl~-~g~~~~~-~~----~~~~~~~~~WspDg~~l~y~~~~~ 199 (732)
.+.|||||++ ++++.+.+ ++ ...++.++++. +|+.... .. ......+++|||||+.|+++..
T Consensus 87 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~-- 164 (365)
T 1jof_A 87 ANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL-- 164 (365)
T ss_dssp GGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET--
T ss_pred cEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC--
Confidence 4679999997 45554300 00 11367888886 4653211 10 1223478999999998866531
Q ss_pred CCCCCCCCCCCcccCCcccEEEEEECC-CCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 200 PKEGKDMDAGTETDSNLYHEFYYHFLG-TKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~v~~~~lg-t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
....|+++++. ++....+.....+........++|||||++|++...... .-.+|.++.++
T Consensus 165 ----------------~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~--~v~v~~~~~~~ 226 (365)
T 1jof_A 165 ----------------TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGN--RICEYVIDPAT 226 (365)
T ss_dssp ----------------TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTT--EEEEEEECTTT
T ss_pred ----------------CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCC--eEEEEEEeCCC
Confidence 12468888887 443211111221111123457899999999876643222 34455555544
Q ss_pred CCCCcccccccCCCCCcEEee---ecc-----------cceEEE-EEecCCeEEEEeCCCCC---CceEEEEeCC-CCCC
Q 004766 279 LPEGLEGFKKRDGLLPFVKLI---DGF-----------DAQYEV-IANDDTVFTFLTNKDAP---KYKIIRVDLK-EPND 339 (732)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~---~~~-----------~~~~~~-~s~dg~~l~~~s~~~~~---~~~l~~~d~~-~~~~ 339 (732)
+.... ....+. .+. ...... |+|||+.||+ ++++.. ...|.+++++ ++.
T Consensus 227 g~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v-~~~~~~~~~~~~i~v~~~~~~g~- 294 (365)
T 1jof_A 227 HMPVY----------THHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA-SSRANKFELQGYIAGFKLRDCGS- 294 (365)
T ss_dssp CCEEE----------EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE-EEEESSTTSCCEEEEEEECTTSC-
T ss_pred CcEEE----------ccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEE-ECCCCCCCCCCeEEEEEECCCCC-
Confidence 32000 000111 010 112235 8999998874 443321 1256666664 444
Q ss_pred ceE---eccCCCCCceeEEEEec---C-CEEEEEEecCCeeEEEEEeCCC
Q 004766 340 WFE---VIPEAERDVLESATAVN---L-NQMIVSYLSDVKYVLQIRDLKN 382 (732)
Q Consensus 340 ~~~---l~~~~~~~~l~~~~~~~---~-~~l~~~~~~~g~~~l~~~d~~~ 382 (732)
... +++.. ......+.+++ + +.|++....+ ..|.+|+++.
T Consensus 295 ~~~~~~~~~~~-~~~~~~~a~sp~~~dg~~l~v~~~~~--~~v~v~~~~~ 341 (365)
T 1jof_A 295 IEKQLFLSPTP-TSGGHSNAVSPCPWSDEWMAITDDQE--GWLEIYRWKD 341 (365)
T ss_dssp EEEEEEEEECS-SCCTTCCCEEECTTCTTEEEEECSSS--CEEEEEEEET
T ss_pred EEEeeeeeecC-CCCcccceecCCCcCCCEEEEEEcCC--CeEEEEEEch
Confidence 332 22211 12234556666 4 4555544333 4577777653
No 384
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.70 E-value=1.3e-05 Score=87.21 Aligned_cols=239 Identities=11% Similarity=0.041 Sum_probs=139.7
Q ss_pred CEEEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEe--CCcEEEEEEecCCCCCCCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTH--DSKGFFYSRYPAPKEGKDMD 207 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~Wsp--Dg~~l~y~~~~~~~~~~~~~ 207 (732)
...+..+.|+|++ +|+.. +.+ .+|++||+++++.+.... .......++|++ |++.|+....+
T Consensus 162 ~~~V~~l~~~~~~-~l~s~-s~d----g~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d--------- 226 (464)
T 3v7d_B 162 DGGVWALKYAHGG-ILVSG-STD----RTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD--------- 226 (464)
T ss_dssp SSCEEEEEECSTT-EEEEE-ETT----SCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT---------
T ss_pred CcCEEEEEEcCCC-EEEEE-eCC----CCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC---------
Confidence 3457789999999 44433 222 479999999998543221 122346778884 67777766533
Q ss_pred CCCcccCCcccEEEEEECCCCCCCCe-------------------EEEecCCCCeeEEEeEEecCCcEEEEEEecCCcce
Q 004766 208 AGTETDSNLYHEFYYHFLGTKQSEDI-------------------LCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPV 268 (732)
Q Consensus 208 ~~~~~~~~~~~~v~~~~lgt~~~~~~-------------------~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 268 (732)
..|.+|++.+...... ++.....+.... ..++++|++++....++
T Consensus 227 ----------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~d~---- 290 (464)
T 3v7d_B 227 ----------NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV--RTVSGHGNIVVSGSYDN---- 290 (464)
T ss_dssp ----------SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCE--EEEEEETTEEEEEETTS----
T ss_pred ----------CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceE--EEEcCCCCEEEEEeCCC----
Confidence 2477777765432210 011111111122 34589999988766443
Q ss_pred EEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC
Q 004766 269 NKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA 347 (732)
Q Consensus 269 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~ 347 (732)
.|.++|+.++. ....+........ ..|+|+|+.++..+.. ..|..+|+.++.....+..+.
T Consensus 291 -~i~vwd~~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~~~h~ 352 (464)
T 3v7d_B 291 -TLIVWDVAQMK-------------CLYILSGHTDRIYSTIYDHERKRCISASMD----TTIRIWDLENGELMYTLQGHT 352 (464)
T ss_dssp -CEEEEETTTTE-------------EEEEECCCSSCEEEEEEETTTTEEEEEETT----SCEEEEETTTTEEEEEECCCS
T ss_pred -eEEEEECCCCc-------------EEEEecCCCCCEEEEEEcCCCCEEEEEeCC----CcEEEEECCCCcEEEEEeCCC
Confidence 38888987632 1222222222222 2588998887765442 358889998876444444443
Q ss_pred CCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 348 ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 348 ~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
..+..+.+.+ ..+++...++ .|.+||+.+++...... ....+..+.+++++..++. .+ -..+..||+.
T Consensus 353 --~~v~~~~~~~--~~l~s~s~dg--~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~-~~----dg~i~iwd~~ 420 (464)
T 3v7d_B 353 --ALVGLLRLSD--KFLVSAAADG--SIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVS-GS----ENQFNIYNLR 420 (464)
T ss_dssp --SCEEEEEECS--SEEEEEETTS--EEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEE-EE----TTEEEEEETT
T ss_pred --CcEEEEEEcC--CEEEEEeCCC--cEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEE-ec----CCeEEEEECC
Confidence 5677777764 4555666664 68999998765432332 2233344556777775543 33 2589999999
Q ss_pred CCC
Q 004766 428 TET 430 (732)
Q Consensus 428 ~~~ 430 (732)
+++
T Consensus 421 ~g~ 423 (464)
T 3v7d_B 421 SGK 423 (464)
T ss_dssp TCC
T ss_pred CCc
Confidence 885
No 385
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=98.69 E-value=2.7e-07 Score=93.13 Aligned_cols=105 Identities=14% Similarity=0.059 Sum_probs=64.9
Q ss_pred cEEEEEcCCCCccCC-CCcChhHHHHHHhc--CcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 482 PCLLYGYGGFNISVT-PSFSVSRTILMRHL--GAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 482 P~vv~~hG~~~~~~~-~~~~~~~~~~l~~~--G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
+.||++||..+.... ..|.. +...|++. |+.|+++|+ |.|....... +.. ....+++.+.++.+......
T Consensus 6 ~pvVllHG~~~~~~~~~~~~~-~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~--~~~---~~~~~~~~~~~~~l~~~~~l 78 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPLSMGA-IKKMVEKKIPGIHVLSLEI-GKTLREDVEN--SFF---LNVNSQVTTVCQILAKDPKL 78 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHH-HHHHHHHHSTTCCEEECCC-SSSHHHHHHH--HHH---SCHHHHHHHHHHHHHSCGGG
T ss_pred CcEEEECCCCCCCCCcccHHH-HHHHHHHHCCCcEEEEEEe-CCCCcccccc--ccc---cCHHHHHHHHHHHHHhhhhc
Confidence 348999998766422 24443 44556544 889999997 7664321111 100 11223333444444332111
Q ss_pred CCCcEEEEecChhHHHHHHHHhhCCCe-eeEEEEcCC
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQRPDL-FGCALAHVG 594 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~p~~-f~a~v~~~p 594 (732)
.+++.++||||||+++..++.++|+. .+.+|+..+
T Consensus 79 -~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~ 114 (279)
T 1ei9_A 79 -QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGG 114 (279)
T ss_dssp -TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESC
T ss_pred -cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecC
Confidence 26899999999999999999999984 888875543
No 386
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.68 E-value=5.3e-06 Score=85.94 Aligned_cols=238 Identities=10% Similarity=0.019 Sum_probs=132.8
Q ss_pred CCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEE
Q 004766 142 DAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFY 221 (732)
Q Consensus 142 DG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~ 221 (732)
++++|..+...+ ..|.++|+++++.+...........++++||| .||.+.. ....|+
T Consensus 52 ~~~~lyv~~~~~----~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~------------------~~~~v~ 108 (328)
T 3dsm_A 52 RDGIGWIVVNNS----HVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQI------------------WDYRIF 108 (328)
T ss_dssp ETTEEEEEEGGG----TEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEB------------------SCSEEE
T ss_pred ECCEEEEEEcCC----CEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEEC------------------CCCeEE
Confidence 456655554322 37999999999865422222234778999998 5655531 234688
Q ss_pred EEECCCCCCCCeEEEecCCC---CeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEe
Q 004766 222 YHFLGTKQSEDILCWKDPEH---PKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKL 298 (732)
Q Consensus 222 ~~~lgt~~~~~~~v~~~~~~---~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l 298 (732)
+++..+..... ....... ......+++ +++.|++... +. ...|.++|++++. ....+
T Consensus 109 ~iD~~t~~~~~--~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~-~~--~~~v~viD~~t~~-------------~~~~i 168 (328)
T 3dsm_A 109 IINPKTYEITG--YIECPDMDMESGSTEQMVQ--YGKYVYVNCW-SY--QNRILKIDTETDK-------------VVDEL 168 (328)
T ss_dssp EEETTTTEEEE--EEECTTCCTTTCBCCCEEE--ETTEEEEEEC-TT--CCEEEEEETTTTE-------------EEEEE
T ss_pred EEECCCCeEEE--EEEcCCccccCCCcceEEE--ECCEEEEEcC-CC--CCEEEEEECCCCe-------------EEEEE
Confidence 88877653211 1121210 001123455 5666655532 11 3569999988742 01122
Q ss_pred eecccceEEEEEecCCeEEEEeCCCCC-------CceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecC
Q 004766 299 IDGFDAQYEVIANDDTVFTFLTNKDAP-------KYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSD 370 (732)
Q Consensus 299 ~~~~~~~~~~~s~dg~~l~~~s~~~~~-------~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~ 370 (732)
..+.......++++|+ +|+.+..... ...|+++|.++++ ....+.-........+.++++ +.+|+.. .
T Consensus 169 ~~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~-v~~~~~~~~g~~p~~la~~~d~~~lyv~~-~- 244 (328)
T 3dsm_A 169 TIGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFT-VEKQFKFKLGDWPSEVQLNGTRDTLYWIN-N- 244 (328)
T ss_dssp ECSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTE-EEEEEECCTTCCCEEEEECTTSCEEEEES-S-
T ss_pred EcCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCe-EEEEEecCCCCCceeEEEecCCCEEEEEc-c-
Confidence 2222222224677775 7766653210 2579999998775 222222111234567888874 5555542 2
Q ss_pred CeeEEEEEeCCCCceeeecccc--cceeeEeecccCCcEEEEEE-ecCCCCceEEEEECCCCC
Q 004766 371 VKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISF-TSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 371 g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~~l~~~~-ss~~~p~~~y~~d~~~~~ 430 (732)
.|+++|.++++.......+ ......+..+|+++.++++- .++.....++++|+. ++
T Consensus 245 ---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 245 ---DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp ---SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred ---EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 7999999877652211112 23456778888777787764 334557889999987 64
No 387
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.66 E-value=2.5e-07 Score=100.20 Aligned_cols=206 Identities=10% Similarity=0.026 Sum_probs=116.9
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
+..+.|||||++|+... ....|++||+.+...............++|+|+++.++++...
T Consensus 212 ~~~~~~~~~~~~l~~g~-----~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~--------------- 271 (435)
T 4e54_B 212 FCSLDVSASSRMVVTGD-----NVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASV--------------- 271 (435)
T ss_dssp CCCEEEETTTTEEEEEC-----SSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEET---------------
T ss_pred EEEEEECCCCCEEEEEe-----CCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecC---------------
Confidence 34678999999988552 2247999999866543322222235789999999876665422
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 293 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 293 (732)
...|.+|++.+......++.. ..+...+..++|||||++|+..+.++ .|.++|+.++...
T Consensus 272 ---d~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~spdg~~l~s~~~D~-----~i~iwd~~~~~~~----------- 331 (435)
T 4e54_B 272 ---DQTVKIWDLRQVRGKASFLYS-LPHRHPVNAACFSPDGARLLTTDQKS-----EIRVYSASQWDCP----------- 331 (435)
T ss_dssp ---TSBCCEEETTTCCSSSCCSBC-CBCSSCEEECCBCTTSSEEEEEESSS-----CEEEEESSSSSSE-----------
T ss_pred ---cceeeEEecccccccceEEEe-eeccccccceeECCCCCeeEEEcCCC-----EEEEEECCCCccc-----------
Confidence 234777888665433222211 12233466889999999998765443 3778888764311
Q ss_pred CcEEeeecc-------cceEEEEEecCCeEEEEeCCC--------CCCceEEEEeCCCCCCceEeccCCCCCceeEE-EE
Q 004766 294 PFVKLIDGF-------DAQYEVIANDDTVFTFLTNKD--------APKYKIIRVDLKEPNDWFEVIPEAERDVLESA-TA 357 (732)
Q Consensus 294 ~~~~l~~~~-------~~~~~~~s~dg~~l~~~s~~~--------~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~-~~ 357 (732)
..+.... ......|++++..+++....+ .....|..+|..++.....+..+. ...+..+ .+
T Consensus 332 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~-~~~v~s~~~f 408 (435)
T 4e54_B 332 --LGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE-SSGISSLNEF 408 (435)
T ss_dssp --EEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS-CCCCCCEEEE
T ss_pred --eEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC-CCcEEEEEEE
Confidence 1111100 000123666666555443221 112347788888876444444332 2334444 56
Q ss_pred ecCCEEEEEEecCCeeEEEEEeCCCCce
Q 004766 358 VNLNQMIVSYLSDVKYVLQIRDLKNGSL 385 (732)
Q Consensus 358 ~~~~~l~~~~~~~g~~~l~~~d~~~g~~ 385 (732)
++++.+++... ++ .|++|++++|+.
T Consensus 409 spdg~~lasg~-d~--~i~iW~~~~gk~ 433 (435)
T 4e54_B 409 NPMGDTLASAM-GY--HILIWSQQEART 433 (435)
T ss_dssp CTTSSCEEEEC-SS--EEEECCCC----
T ss_pred CCCCCEEEEEc-CC--cEEEEECCcCee
Confidence 77666666654 43 699999987765
No 388
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.66 E-value=1.7e-06 Score=102.38 Aligned_cols=241 Identities=7% Similarity=0.004 Sum_probs=131.7
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-c-----------ccceeeeeEEEEeCCcEEEEEEecCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-A-----------LSWFKFSSIAWTHDSKGFFYSRYPAPK 201 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~-----------~~~~~~~~~~WspDg~~l~y~~~~~~~ 201 (732)
+..+++||||++||-.. ...+|++||+.+|..... . ........++|||||+.|+....+.
T Consensus 438 v~sv~~spdg~~laSgs-----~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dg-- 510 (902)
T 2oaj_A 438 KRQKLPAEYGTAFITGH-----SNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETG-- 510 (902)
T ss_dssp CCCCCCCSEEEEEEEEE-----TTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTS--
T ss_pred CCcccccccCcEEEEec-----CCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCc--
Confidence 34567899999888443 335899999998853210 0 1112357899999999999876443
Q ss_pred CCCCCCCCCcccCCcccEEEEEECCCCCC---------CC--------------------------------eEEEecCC
Q 004766 202 EGKDMDAGTETDSNLYHEFYYHFLGTKQS---------ED--------------------------------ILCWKDPE 240 (732)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~---------~~--------------------------------~~v~~~~~ 240 (732)
.|.+|++.++.. .+ .++.....
T Consensus 511 -----------------tV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 573 (902)
T 2oaj_A 511 -----------------DVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA 573 (902)
T ss_dssp -----------------CEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC
T ss_pred -----------------EEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEc
Confidence 466666654310 00 11222222
Q ss_pred CCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcE--Eeeecc-----cceE-EEEE--
Q 004766 241 HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFV--KLIDGF-----DAQY-EVIA-- 310 (732)
Q Consensus 241 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~l~~~~-----~~~~-~~~s-- 310 (732)
+...+..+++|||| +|+..+.+ ..|.++|++++.. .. .+ ..+ .... ..|+
T Consensus 574 h~~~V~svafSpdG-~lAsgs~D-----~tv~lwd~~~~~~-------------~~~~~~-~~~~~gh~~~V~sv~Fs~~ 633 (902)
T 2oaj_A 574 NKGKTSAINNSNIG-FVGIAYAA-----GSLMLIDRRGPAI-------------IYMENI-REISGAQSACVTCIEFVIM 633 (902)
T ss_dssp CSCSEEEEEECBTS-EEEEEETT-----SEEEEEETTTTEE-------------EEEEEG-GGTCSSCCCCEEEEEEEEE
T ss_pred CCCcEEEEEecCCc-EEEEEeCC-----CcEEEEECCCCeE-------------EEEeeh-hHhccccccceEEEEEEEE
Confidence 34556789999999 87766543 3477889876310 00 11 111 1111 2488
Q ss_pred ---ecC---CeEEEEeCCCCCCceEEEEeC---CCCCCceEeccCC---CCCceeEEE-Ee-------------------
Q 004766 311 ---NDD---TVFTFLTNKDAPKYKIIRVDL---KEPNDWFEVIPEA---ERDVLESAT-AV------------------- 358 (732)
Q Consensus 311 ---~dg---~~l~~~s~~~~~~~~l~~~d~---~~~~~~~~l~~~~---~~~~l~~~~-~~------------------- 358 (732)
||| ..|+..+++ ..|..+|+ .+++....+..+. .+..+-.+. +.
T Consensus 634 ~~~~Dg~~~~~l~sgs~D----~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~ 709 (902)
T 2oaj_A 634 EYGDDGYSSILMVCGTDM----GEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSK 709 (902)
T ss_dssp ECTTSSSEEEEEEEEETT----SEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGG
T ss_pred ecCCCCCcceEEEEEecC----CcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCC
Confidence 886 455544443 35666666 4544222332221 012232333 22
Q ss_pred ---cCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEe---e------cccCCcEEEEEEecCCCCceEEEEEC
Q 004766 359 ---NLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAI---S------ARREDSVVFISFTSFLIPGIVYQCNL 426 (732)
Q Consensus 359 ---~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~---~------~s~d~~~l~~~~ss~~~p~~~y~~d~ 426 (732)
. +..++...+ ..|++|++.+++..+++-...+.+..+ . .++++..|+.. + .-.++..|++
T Consensus 710 ~~~~-~~~~l~~~~---~~ir~~~~~~~k~~~k~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~-~---~~g~i~~~s~ 781 (902)
T 2oaj_A 710 GLCI-PGIVLITGF---DDIRLITLGKSKSTHKGFKYPLAATGLSYISTVEKNNDRKNLTVIITL-E---INGHLRVFTI 781 (902)
T ss_dssp TCCC-CEEEEEECS---SEEEEECTTCCCEEEEECSSCEEEEEEEEEEEECSSSCEEEEEEEEEE-E---TTSEEEEEET
T ss_pred CCCC-CeEEEEEec---cceEEEeCccccceeeEcccceeeeEEEEEEeccccccccCceEEEEE-e---CCCcEEEEEC
Confidence 2 334444443 479999998888755552223344343 3 34555444332 2 3468999999
Q ss_pred CCCC
Q 004766 427 KTET 430 (732)
Q Consensus 427 ~~~~ 430 (732)
.+.+
T Consensus 782 p~l~ 785 (902)
T 2oaj_A 782 PDFK 785 (902)
T ss_dssp TTCC
T ss_pred cchH
Confidence 8875
No 389
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.65 E-value=4.7e-08 Score=105.51 Aligned_cols=114 Identities=9% Similarity=-0.018 Sum_probs=81.4
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhH-HHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcC
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSR-TILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG 556 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 556 (732)
+...|+||++||..+.. ...|...+ ..+++..||.|+++|.||.|..... ... ..-....+|+.+.+++|.++.
T Consensus 67 ~~~~p~vvliHG~~~~~-~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~--~~~--~~~~~~~~dl~~li~~L~~~~ 141 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKG-EDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYT--QAS--YNTRVVGAEIAFLVQVLSTEM 141 (452)
T ss_dssp CTTSEEEEEECCSCCTT-CTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHH--HHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCC-CchHHHHHHHHHHhhCCCEEEEEechhcccCchh--HhH--hhHHHHHHHHHHHHHHHHHhc
Confidence 35679999999987654 23454433 3444434999999999998765421 110 011123567888888887543
Q ss_pred CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 557 YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 557 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
-++.+++.++|||+||.+++.++.++|++++++|...|..
T Consensus 142 g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 142 GYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 3457899999999999999999999999999999876643
No 390
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.65 E-value=5.4e-06 Score=87.03 Aligned_cols=206 Identities=11% Similarity=0.012 Sum_probs=121.5
Q ss_pred EEEEeEEECCC--CcEEEEEEeccCCceEEEEEEECCCCc--eec-ccccceeeeeEEEEeC--CcEEEEEEecCCCCCC
Q 004766 132 AALIKVSVSED--AKYLAYALSYSGSDWATIKLMRIEDQI--VEA-DALSWFKFSSIAWTHD--SKGFFYSRYPAPKEGK 204 (732)
Q Consensus 132 ~~~~~~~~SPD--G~~la~~~~~~G~e~~~i~v~dl~~g~--~~~-~~~~~~~~~~~~WspD--g~~l~y~~~~~~~~~~ 204 (732)
..+..+.|||+ |++|+.... + ..|++||+.+++ .+. ..........++|+|+ ++.|+....+
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~-d----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------ 124 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSY-D----GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------ 124 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEET-T----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------
T ss_pred CcEEEEEeCCCCCCCEEEEecc-C----CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC------
Confidence 34678999988 888876532 2 379999999886 221 1112223578999999 8888877533
Q ss_pred CCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec-------------CCcEEEEEEecCCcceEEE
Q 004766 205 DMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-------------DGQYLVMCIEENCDPVNKV 271 (732)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp-------------Dg~~l~~~~~~~~~~~~~l 271 (732)
..|.+|++.+........+.. +...+..+.|+| |+++|+....++ .|
T Consensus 125 -------------~~i~v~d~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i 184 (379)
T 3jrp_A 125 -------------GKVSVVEFKENGTTSPIIIDA--HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LV 184 (379)
T ss_dssp -------------SEEEEEECCTTSCCCEEEEEC--CTTCEEEEEECCCC----------CTTCEEEEEETTS-----CE
T ss_pred -------------CcEEEEecCCCCceeeEEecC--CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eE
Confidence 368899987764433333333 233467899999 689887765443 37
Q ss_pred EEEeCCCCCCCcccccccCCCCCcEEeeecccce-EEEEEec---CCeEEEEeCCCCCCceEEEEeCCCCCC--ceEecc
Q 004766 272 YYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIAND---DTVFTFLTNKDAPKYKIIRVDLKEPND--WFEVIP 345 (732)
Q Consensus 272 ~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~d---g~~l~~~s~~~~~~~~l~~~d~~~~~~--~~~l~~ 345 (732)
+++|+.++... ......+....... ...|+|+ ++.|+..+. + ..|..+|+.++.. ...+..
T Consensus 185 ~i~d~~~~~~~---------~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~-d---g~i~iwd~~~~~~~~~~~~~~ 251 (379)
T 3jrp_A 185 KIWKYNSDAQT---------YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ-D---RTCIIWTQDNEQGPWKKTLLK 251 (379)
T ss_dssp EEEEEETTTTE---------EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET-T---SCEEEEEESSTTSCCEEEESS
T ss_pred EEEEecCCCcc---------eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC-C---CEEEEEeCCCCCccceeeeec
Confidence 77787653210 00011111111111 2358998 555554333 2 3467777766531 122222
Q ss_pred C-CCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCC
Q 004766 346 E-AERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNG 383 (732)
Q Consensus 346 ~-~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g 383 (732)
. .....+..+.|++++.+++....++ .|++|++.++
T Consensus 252 ~~~~~~~v~~~~~s~~g~~l~~~~~dg--~i~iw~~~~~ 288 (379)
T 3jrp_A 252 EEKFPDVLWRASWSLSGNVLALSGGDN--KVTLWKENLE 288 (379)
T ss_dssp SSCCSSCEEEEEECSSSCCEEEEESSS--SEEEEEEEET
T ss_pred cccCCCcEEEEEEcCCCCEEEEecCCC--cEEEEeCCCC
Confidence 1 1235678899998766666766675 4666776533
No 391
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.62 E-value=7.7e-08 Score=103.79 Aligned_cols=114 Identities=10% Similarity=-0.036 Sum_probs=80.4
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhH-HHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcC
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSR-TILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG 556 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 556 (732)
+...|+||++||..+.. ...|...+ ..+++..||.|+++|.||.|..... ... ..-....+|+.+.+++|.++.
T Consensus 67 ~~~~p~vvliHG~~~~~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~--~~~--~~~~~~~~dl~~~i~~L~~~~ 141 (452)
T 1w52_X 67 QSSRKTHFVIHGFRDRG-EDSWPSDMCKKILQVETTNCISVDWSSGAKAEYT--QAV--QNIRIVGAETAYLIQQLLTEL 141 (452)
T ss_dssp CTTSCEEEEECCTTCCS-SSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHH--HHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCC-CchHHHHHHHHHHhhCCCEEEEEecccccccccH--HHH--HhHHHHHHHHHHHHHHHHHhc
Confidence 35679999999987654 23454433 3444434999999999998765421 111 011223467778888887542
Q ss_pred CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 557 YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 557 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
-.+.+++.++|||+||.+++.++.++|++++.+|...|..
T Consensus 142 g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 142 SYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 2456899999999999999999999999999999876643
No 392
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.61 E-value=1.7e-05 Score=88.18 Aligned_cols=238 Identities=13% Similarity=0.008 Sum_probs=136.5
Q ss_pred EEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCc
Q 004766 137 VSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNL 216 (732)
Q Consensus 137 ~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~ 216 (732)
+.|+.|...++|+..... .+|.++|+++++.+.....+....++++||||+++|.+..
T Consensus 159 ~~~~~d~~~~~~V~~~~~---~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~------------------- 216 (567)
T 1qks_A 159 QMNDWDLENLFSVTLRDA---GQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGR------------------- 216 (567)
T ss_dssp CCSCCCGGGEEEEEETTT---TEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET-------------------
T ss_pred cccccCCCceEEEEeCCC---CeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcC-------------------
Confidence 346666555666665433 3899999999986643222223468999999998887632
Q ss_pred ccEEEEEECC--CCCCCCeEEEecCCCCeeEEEeEEe----cCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 217 YHEFYYHFLG--TKQSEDILCWKDPEHPKYIFSGHVT----EDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 217 ~~~v~~~~lg--t~~~~~~~v~~~~~~~~~~~~~~~S----pDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
...|..+++. +.. .+.+.+-.. .-..+++| |||+++++..... ..+.++|..+.+
T Consensus 217 dg~V~viD~~~~t~~----~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~----~~v~ViD~~t~~---------- 277 (567)
T 1qks_A 217 DGKVNMIDLWMKEPT----TVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWP----PQYVIMDGETLE---------- 277 (567)
T ss_dssp TSEEEEEETTSSSCC----EEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEET----TEEEEEETTTCC----------
T ss_pred CCeEEEEECCCCCCc----EeEEEecCC-CCceeEEccccCCCCCEEEEEEccC----CeEEEEECCCCc----------
Confidence 2368889985 432 222222211 23578999 7999997765432 347788877632
Q ss_pred CCCCcEEeee-c--c-------cce--EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCce-EeccCCCCCceeEEEE
Q 004766 291 GLLPFVKLID-G--F-------DAQ--YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWF-EVIPEAERDVLESATA 357 (732)
Q Consensus 291 ~~~~~~~l~~-~--~-------~~~--~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~-~l~~~~~~~~l~~~~~ 357 (732)
....+.. + . ... ..+.++++..+++.. .+ .++|+.+|..+..... .-++. ...+.++.+
T Consensus 278 ---~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~-~~--~g~v~~vd~~~~~~~~v~~i~~--~~~~~d~~~ 349 (567)
T 1qks_A 278 ---PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV-KE--TGKILLVDYTDLNNLKTTEISA--ERFLHDGGL 349 (567)
T ss_dssp ---EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE-TT--TTEEEEEETTCSSEEEEEEEEC--CSSEEEEEE
T ss_pred ---EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe-cC--CCeEEEEecCCCccceeeeeec--cccccCceE
Confidence 1111111 1 0 001 123567776666544 22 4589999987654111 11222 245677888
Q ss_pred ecCCE-EEEEEecCCeeEEEEEeCCCCceeeeccc-c----cceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 358 VNLNQ-MIVSYLSDVKYVLQIRDLKNGSLLHQLPI-E----IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 358 ~~~~~-l~~~~~~~g~~~l~~~d~~~g~~~~~l~~-~----~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+++++ +++.... ..+|.++|+++++....+.. . .+....+ .++++..++++. -.....+..+|..+
T Consensus 350 ~pdgr~~~va~~~--sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~--~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 350 DGSHRYFITAANA--RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATS--HMGDDSVALIGTDP 421 (567)
T ss_dssp CTTSCEEEEEEGG--GTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEE--BSSSSEEEEEECCT
T ss_pred CCCCCEEEEEeCC--CCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeC--CCCCCeEEEecCCC
Confidence 87655 4444433 35799999998886555554 2 2211112 356666665432 22335677888765
No 393
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.61 E-value=5.2e-06 Score=89.54 Aligned_cols=209 Identities=7% Similarity=-0.003 Sum_probs=121.8
Q ss_pred EEEEeEEECCCCcEEEEEEeccCCceEEEEEEECC---CCceecccc-------------cceeeeeE--EEEeCCcEEE
Q 004766 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIE---DQIVEADAL-------------SWFKFSSI--AWTHDSKGFF 193 (732)
Q Consensus 132 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~---~g~~~~~~~-------------~~~~~~~~--~WspDg~~l~ 193 (732)
..+..+.|+||+++|+.... ...|++||++ +|+.+.... .......+ .|+||++.|+
T Consensus 112 ~~v~~~~~~~~~~~l~s~s~-----dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (437)
T 3gre_A 112 STVTQITMIPNFDAFAVSSK-----DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLV 186 (437)
T ss_dssp SCEEEEEECTTSSEEEEEET-----TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEE
T ss_pred CCEEEEEEeCCCCEEEEEeC-----CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEE
Confidence 34778999999999886532 2479999985 454321100 00111222 2667888777
Q ss_pred EEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEE
Q 004766 194 YSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYY 273 (732)
Q Consensus 194 y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~ 273 (732)
....+ ..|++|++.++.. +..+....+...+..++|+|||++|+..+.++ .|.+
T Consensus 187 ~~~~d-------------------~~i~iwd~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~i 240 (437)
T 3gre_A 187 ALTNL-------------------SRVIIFDIRTLER--LQIIENSPRHGAVSSICIDEECCVLILGTTRG-----IIDI 240 (437)
T ss_dssp EEETT-------------------SEEEEEETTTCCE--EEEEECCGGGCCEEEEEECTTSCEEEEEETTS-----CEEE
T ss_pred EEeCC-------------------CeEEEEeCCCCee--eEEEccCCCCCceEEEEECCCCCEEEEEcCCC-----eEEE
Confidence 76533 3689999977542 23333321234567899999999998766543 3788
Q ss_pred EeCCCCCCCcccccccCCCCCcEEeeecccceEE--EEE----ecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC
Q 004766 274 CDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYE--VIA----NDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA 347 (732)
Q Consensus 274 ~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~s----~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~ 347 (732)
+|+.++. +...+.......+. .|+ +++..|+ .... +..|..+|+.++.....+..+.
T Consensus 241 wd~~~~~-------------~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~-s~~~---dg~i~iwd~~~~~~~~~~~~~~ 303 (437)
T 3gre_A 241 WDIRFNV-------------LIRSWSFGDHAPITHVEVCQFYGKNSVIVV-GGSS---KTFLTIWNFVKGHCQYAFINSD 303 (437)
T ss_dssp EETTTTE-------------EEEEEBCTTCEEEEEEEECTTTCTTEEEEE-EEST---TEEEEEEETTTTEEEEEEESSS
T ss_pred EEcCCcc-------------EEEEEecCCCCceEEEEeccccCCCccEEE-EEcC---CCcEEEEEcCCCcEEEEEEcCC
Confidence 8987632 12222111111111 233 3443333 3322 3578888988765333333221
Q ss_pred ------------------------CCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeeccc
Q 004766 348 ------------------------ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI 391 (732)
Q Consensus 348 ------------------------~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~ 391 (732)
....+..+.+++ +.++++...++ .|++||+.+++....+..
T Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~--~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 304 EQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSN-DKILLTDEATS--SIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp SCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEET-TEEEEEEGGGT--EEEEEETTCGGGCEEEEC
T ss_pred CCCccceecccccccccceecccccCCceEEEEECC-ceEEEecCCCC--eEEEEECCCcccceEEec
Confidence 112356677774 77888887774 799999988876555543
No 394
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.60 E-value=1.1e-07 Score=96.50 Aligned_cols=101 Identities=15% Similarity=0.148 Sum_probs=75.3
Q ss_pred CCccEEEEEcCCCCccC---CCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHc
Q 004766 479 GSHPCLLYGYGGFNISV---TPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA 555 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~---~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 555 (732)
++.|.||++||..+... ...|.. +...|.++||.|+.+|+||.|... ...+++.+.++.+++.
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~-~~~~L~~~G~~v~~~d~~g~g~s~-------------~~~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFG-IPSALRRDGAQVYVTEVSQLDTSE-------------VRGEQLLQQVEEIVAL 70 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTT-HHHHHHHTTCCEEEECCCSSSCHH-------------HHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEeCCCCCCccccccccHHH-HHHHHHhCCCEEEEEeCCCCCCch-------------hhHHHHHHHHHHHHHH
Confidence 45688999999877643 224443 445566699999999999876421 2345666666655544
Q ss_pred CCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 556 GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 556 ~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
.+.+++.++|||+||.++..++.++|+.++++|+..|.
T Consensus 71 --~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p 108 (285)
T 1ex9_A 71 --SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAP 108 (285)
T ss_dssp --HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred --hCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCC
Confidence 23468999999999999999999999999999988774
No 395
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.60 E-value=1.5e-07 Score=96.82 Aligned_cols=104 Identities=16% Similarity=0.127 Sum_probs=77.5
Q ss_pred CCccEEEEEcCCCCccCC----CCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHH
Q 004766 479 GSHPCLLYGYGGFNISVT----PSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLIS 554 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~----~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 554 (732)
.+.|+||++||..+.... ..|.. +...|.++||.|+++|+||.|.... .....+++.+.++.+++
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~-l~~~L~~~G~~V~~~d~~g~g~s~~----------~~~~~~~l~~~i~~~l~ 74 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYG-IQEDLQQRGATVYVANLSGFQSDDG----------PNGRGEQLLAYVKTVLA 74 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTT-HHHHHHHTTCCEEECCCCSSCCSSS----------TTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHH-HHHHHHhCCCEEEEEcCCCCCCCCC----------CCCCHHHHHHHHHHHHH
Confidence 456889999998776421 34444 4455666999999999999775321 12345666666666655
Q ss_pred cCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 555 AGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 555 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
. .+.+++.++|||+||+++..++.++|++++++|...+.
T Consensus 75 ~--~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p 113 (320)
T 1ys1_X 75 A--TGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTP 113 (320)
T ss_dssp H--HCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred H--hCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCC
Confidence 4 24568999999999999999999999999999988774
No 396
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.59 E-value=3.3e-05 Score=83.54 Aligned_cols=234 Identities=13% Similarity=0.080 Sum_probs=136.7
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
+..+.+ ++++|+... ...+|++||+.+++.+.... .......+.| |++.|+....+
T Consensus 202 v~~~~~--~~~~l~s~s-----~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-------------- 258 (445)
T 2ovr_B 202 VRCMHL--HEKRVVSGS-----RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD-------------- 258 (445)
T ss_dssp EEEEEE--ETTEEEEEE-----TTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETT--------------
T ss_pred EEEEEe--cCCEEEEEe-----CCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCC--------------
Confidence 444445 355555442 12478889988887543211 1112345555 77777766432
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
..|.+|++.++. .+.....+...+..+.+ ||++++....++ .+.++|+.++.
T Consensus 259 -----g~i~iwd~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~-----~i~i~d~~~~~------------ 310 (445)
T 2ovr_B 259 -----FMVKVWDPETET----CLHTLQGHTNRVYSLQF--DGIHVVSGSLDT-----SIRVWDVETGN------------ 310 (445)
T ss_dssp -----SCEEEEEGGGTE----EEEEECCCSSCEEEEEE--CSSEEEEEETTS-----CEEEEETTTCC------------
T ss_pred -----CEEEEEECCCCc----EeEEecCCCCceEEEEE--CCCEEEEEeCCC-----eEEEEECCCCC------------
Confidence 357888876542 22222222334445555 899887665433 38888987742
Q ss_pred CCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC-CCCceeEEEEecCCEEEEEEecCC
Q 004766 293 LPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-ERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 293 ~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
....+ .+.......++++++.++..+. +..|..+|+.++.....+..+. ....+..+.+.+ .++++...++
T Consensus 311 -~~~~~-~~~~~~v~~~~~~~~~l~~~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~~~dg 382 (445)
T 2ovr_B 311 -CIHTL-TGHQSLTSGMELKDNILVSGNA----DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDG 382 (445)
T ss_dssp -EEEEE-CCCCSCEEEEEEETTEEEEEET----TSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS--SEEEEEETTS
T ss_pred -EEEEE-cCCcccEEEEEEeCCEEEEEeC----CCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC--CEEEEEeCCC
Confidence 12222 2222233446667776665443 3468889998776444443311 234577777753 4566666664
Q ss_pred eeEEEEEeCCCCceeeecc-----cccceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 372 KYVLQIRDLKNGSLLHQLP-----IEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~~l~-----~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
.|.+||+.+|+.+..+. ...+.+..+.+++++..++....+-+.+..++.+|...
T Consensus 383 --~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 383 --TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp --EEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred --eEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 78999999888766662 23566788888988775555444444467788888754
No 397
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.58 E-value=6.8e-06 Score=85.90 Aligned_cols=246 Identities=13% Similarity=0.028 Sum_probs=127.4
Q ss_pred EECCCCcEEEEEEecc-CCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCc
Q 004766 138 SVSEDAKYLAYALSYS-GSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNL 216 (732)
Q Consensus 138 ~~SPDG~~la~~~~~~-G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~ 216 (732)
.+.|||+++ |+.+.. ......|+++|.++++.+.....+.. .++++||||+++|.+...... + ....+
T Consensus 39 ~~~pd~~~v-yV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~-P~va~spDG~~lyVan~~~~r-------~--~~G~~ 107 (386)
T 3sjl_D 39 APAPDARRV-YVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL-PNPVVADDGSFIAHASTVFSR-------I--ARGER 107 (386)
T ss_dssp CCCCCTTEE-EEEECGGGCSSEEEEEEETTTTEEEEEEEECSS-CEEEECTTSSCEEEEEEEEEE-------T--TEEEE
T ss_pred ccCCCCCEE-EEEcCcccCCCCEEEEEECCCCeEEEEEECCCC-CcEEECCCCCEEEEEcccccc-------c--ccCCC
Confidence 467999986 555543 11125899999999987643322222 349999999998887421000 0 00012
Q ss_pred ccEEEEEECCCCCCCCeEEEec------CCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 217 YHEFYYHFLGTKQSEDILCWKD------PEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 217 ~~~v~~~~lgt~~~~~~~v~~~------~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
...|.+++..+......+.... ...+ ..+.+||||++|++... .. .+.+.++|+++++.
T Consensus 108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P---~~~a~spDGk~lyVan~-~~--~~~VsVID~~t~~v--------- 172 (386)
T 3sjl_D 108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYP---WMTSLTPDGKTLLFYQF-SP--APAVGVVDLEGKAF--------- 172 (386)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCG---GGEEECTTSSEEEEEEC-SS--SCEEEEEETTTTEE---------
T ss_pred CCEEEEEECCCCeEEEEEECCCccccccCCCC---ceEEEcCCCCEEEEEEc-CC--CCeEEEEECCCCcE---------
Confidence 3458888887754322221211 0112 25789999999876532 21 25699999987420
Q ss_pred CCCCcEEeeecc--------cceEEEEEecCCeEEEEeCCCCCCceEEEEeCCC-CCCc---eEeccCCCCCceeEEEEe
Q 004766 291 GLLPFVKLIDGF--------DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE-PNDW---FEVIPEAERDVLESATAV 358 (732)
Q Consensus 291 ~~~~~~~l~~~~--------~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~-~~~~---~~l~~~~~~~~l~~~~~~ 358 (732)
...+.... ...+...++||+. ..+++.+ +... ..++............+.
T Consensus 173 ----v~tI~v~g~~~~~P~g~~~~~~~~~DG~~--------------~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~ 234 (386)
T 3sjl_D 173 ----KRMLDVPDCYHIFPTAPDTFFMHCRDGSL--------------AKVAFGTEGTPEITHTEVFHPEDEFLINHPAYS 234 (386)
T ss_dssp ----EEEEECCSEEEEEEEETTEEEEEETTSCE--------------EEEECCSSSCCEEEECCCCSCTTSCBCSCCEEE
T ss_pred ----EEEEECCCcceeecCCCceeEEECCCCCE--------------EEEECCCCCeEEEeecceeccccccccccceeE
Confidence 11111100 0011123444443 3333332 1100 011111111111223443
Q ss_pred -cCCEEEEEEecCCeeEEEEEeCCCCc--eeeecc-cc---------cceeeEeecccCCcEEEEEEec-----CCC-Cc
Q 004766 359 -NLNQMIVSYLSDVKYVLQIRDLKNGS--LLHQLP-IE---------IGSVNAISARREDSVVFISFTS-----FLI-PG 419 (732)
Q Consensus 359 -~~~~l~~~~~~~g~~~l~~~d~~~g~--~~~~l~-~~---------~g~v~~~~~s~d~~~l~~~~ss-----~~~-p~ 419 (732)
+++++++... + .+++++|..++. ...++. +. .+....+..+++++++|+.... -.. ..
T Consensus 235 ~~dG~~~~vs~-~--g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~ 311 (386)
T 3sjl_D 235 QKAGRLVWPTY-T--GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR 311 (386)
T ss_dssp TTTTEEEEEBT-T--SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred cCCCcEEEEeC-C--CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCC
Confidence 4566666443 3 479999987443 222232 00 1122235567899999987642 122 36
Q ss_pred eEEEEECCCCC
Q 004766 420 IVYQCNLKTET 430 (732)
Q Consensus 420 ~~y~~d~~~~~ 430 (732)
+++.+|+.+++
T Consensus 312 ~V~viD~~t~k 322 (386)
T 3sjl_D 312 FVVVLDAKTGE 322 (386)
T ss_dssp EEEEEETTTCC
T ss_pred EEEEEECCCCe
Confidence 89999999986
No 398
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.58 E-value=2.3e-07 Score=93.92 Aligned_cols=116 Identities=16% Similarity=0.029 Sum_probs=78.9
Q ss_pred EEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHH
Q 004766 467 MFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFI 546 (732)
Q Consensus 467 ~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~ 546 (732)
..|+.|.. .+.+..+.||++||..+... ..|...+...|.++||.|+.+|++|.|... .....+++.
T Consensus 52 ~~i~~p~~-~~~~~~~pVVLvHG~~~~~~-~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~-----------~~~~~~~la 118 (316)
T 3icv_A 52 AGLTCQGA-SPSSVSKPILLVPGTGTTGP-QSFDSNWIPLSAQLGYTPCWISPPPFMLND-----------TQVNTEYMV 118 (316)
T ss_dssp HTEEETTB-BTTBCSSEEEEECCTTCCHH-HHHTTTHHHHHHHTTCEEEEECCTTTTCSC-----------HHHHHHHHH
T ss_pred hhEeCCCC-CCCCCCCeEEEECCCCCCcH-HHHHHHHHHHHHHCCCeEEEecCCCCCCCc-----------HHHHHHHHH
Confidence 33444533 22345567999999866431 234312456677689999999999876321 112356777
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC---CCeeeEEEEcCCccc
Q 004766 547 SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR---PDLFGCALAHVGVMD 597 (732)
Q Consensus 547 ~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~---p~~f~a~v~~~p~~d 597 (732)
+.++.+.+. ...+++.|+||||||+++..++..+ +++.+.+|+..|...
T Consensus 119 ~~I~~l~~~--~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 119 NAITTLYAG--SGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHHHH--TTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 778887765 2336899999999999998777764 589999998877643
No 399
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.57 E-value=1.4e-06 Score=92.87 Aligned_cols=237 Identities=11% Similarity=-0.029 Sum_probs=121.4
Q ss_pred EEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc------cccceeeeeEEEEe--------CCcEEEEEEecCCCC
Q 004766 137 VSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD------ALSWFKFSSIAWTH--------DSKGFFYSRYPAPKE 202 (732)
Q Consensus 137 ~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~------~~~~~~~~~~~Wsp--------Dg~~l~y~~~~~~~~ 202 (732)
..++|++++||-.. ...+|++||+++++.... ......+..++|+| ||+.|+-...|
T Consensus 95 ~~~~~~~~~las~~-----~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D---- 165 (393)
T 4gq1_A 95 NSSPVYSLFLACVC-----QDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD---- 165 (393)
T ss_dssp --CCEEEEEEEEEE-----TTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT----
T ss_pred eecCCCCCEEEEEe-----CCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC----
Confidence 34677777777543 225899999998864221 11112357899998 88888776543
Q ss_pred CCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCC
Q 004766 203 GKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEG 282 (732)
Q Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 282 (732)
..|.+|++.++.. ...++.. .....+++|+|++..+++..... ..+.++|+.++...
T Consensus 166 ---------------~tv~~Wd~~~~~~-~~~~~~~---~~~v~~v~~~p~~~~~l~~~~~d----~~v~~wd~~t~~~~ 222 (393)
T 4gq1_A 166 ---------------CTLIIWRLTDEGP-ILAGYPL---SSPGISVQFRPSNPNQLIVGERN----GNIRIFDWTLNLSA 222 (393)
T ss_dssp ---------------SEEEEEEEETTEE-EEEEEEC---SSCEEEEEEETTEEEEEEEEETT----SEEEEEETTCCC--
T ss_pred ---------------CeEEEEECCCCce-eeeecCC---CCCcEEEEECCCCCceEEecCCC----CEEEEEECCCCccc
Confidence 3688899865432 1222322 23456899999998665555432 34778888764321
Q ss_pred cccccccCCC--CCcEE----------eeeccc--ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCC
Q 004766 283 LEGFKKRDGL--LPFVK----------LIDGFD--AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE 348 (732)
Q Consensus 283 ~~~~~~~~~~--~~~~~----------l~~~~~--~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~ 348 (732)
.......... ..... ...... .....+.+||+.++-.+. ...+..+|+.++.....+..+..
T Consensus 223 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~----d~~i~vwd~~~~~~~~~l~~~~~ 298 (393)
T 4gq1_A 223 EENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCK----SGAWLRWNLFANNDYNEISDSTM 298 (393)
T ss_dssp --------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECT----TSEEEEEEC--------------
T ss_pred ccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeC----CCCEEEEECccCCCCceEeeecC
Confidence 1000000000 00000 000000 011223478887765433 23566777755431111111100
Q ss_pred ----------------CCceeEEEEec--CCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEE
Q 004766 349 ----------------RDVLESATAVN--LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFI 410 (732)
Q Consensus 349 ----------------~~~l~~~~~~~--~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~ 410 (732)
........+.+ ++.+++....++ .|++||..+|+....+......|..++++|||+.|+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg--~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~ 376 (393)
T 4gq1_A 299 KLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHG--LIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAI 376 (393)
T ss_dssp -----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTT--EEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEE
T ss_pred ccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCC--EEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEE
Confidence 00011122222 345566666664 7899999888764444434567888999999998765
Q ss_pred E
Q 004766 411 S 411 (732)
Q Consensus 411 ~ 411 (732)
.
T Consensus 377 a 377 (393)
T 4gq1_A 377 A 377 (393)
T ss_dssp E
T ss_pred E
Confidence 4
No 400
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.57 E-value=4.5e-07 Score=89.74 Aligned_cols=194 Identities=9% Similarity=-0.065 Sum_probs=106.0
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
+..|.||++||..+.. ..|. .+...|. .++.|+.+|++|.+. ..+|+.+.++.+.
T Consensus 20 ~~~~~l~~~hg~~~~~--~~~~-~~~~~l~-~~~~v~~~d~~g~~~----------------~~~~~~~~i~~~~----- 74 (244)
T 2cb9_A 20 QGGKNLFCFPPISGFG--IYFK-DLALQLN-HKAAVYGFHFIEEDS----------------RIEQYVSRITEIQ----- 74 (244)
T ss_dssp CCSSEEEEECCTTCCG--GGGH-HHHHHTT-TTSEEEEECCCCSTT----------------HHHHHHHHHHHHC-----
T ss_pred CCCCCEEEECCCCCCH--HHHH-HHHHHhC-CCceEEEEcCCCHHH----------------HHHHHHHHHHHhC-----
Confidence 3467899999987653 2343 3445566 789999999998421 2456665555442
Q ss_pred CCCcEEEEecChhHHHHHHHHhhC---CCeeeEEEEcCCcccccccccCCCCCccccccCCCCCHHHH----HHHHhcCc
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQR---PDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEF----YWLIKYSP 631 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~---p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~g~p~~~~~~----~~~~~~sp 631 (732)
..+++.++|+|+||.++..++.+. ++....+|+..+............... ..++-.+...+.+ ..+..+..
T Consensus 75 ~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (244)
T 2cb9_A 75 PEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADTENDD-SAAYLPEAVRETVMQKKRCYQEYWA 153 (244)
T ss_dssp SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCCC--------CCSCHHHHHHHTHHHHHHHHHHH
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccccccHHH-HHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 135799999999999999888764 567777776655432100000000000 0111111000111 11122211
Q ss_pred c-cCCCCCCCCCCCCCCCCCeEEEEeeC--CCCCCCchHHHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCC--CCCC
Q 004766 632 L-HNVRRPWEQNPDKPFQYPSTLLLTAD--HDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGH--GVGL 706 (732)
Q Consensus 632 ~-~~~~~~~~~~~~~~~~~~p~Li~~g~--~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH--~~~~ 706 (732)
. .... .+..|+|+++|. +|. +++... ..+++. ....+.++++++ || .+..
T Consensus 154 ~~~~~~----------~i~~Pvl~i~g~~~~D~-~~~~~~----~~w~~~---------~~~~~~~~~i~g-gH~~~~~~ 208 (244)
T 2cb9_A 154 QLINEG----------RIKSNIHFIEAGIQTET-SGAMVL----QKWQDA---------AEEGYAEYTGYG-AHKDMLEG 208 (244)
T ss_dssp HCCCCS----------CBSSEEEEEECSBCSCC-CHHHHT----TSSGGG---------BSSCEEEEECSS-BGGGTTSH
T ss_pred hhccCC----------CcCCCEEEEEccCcccc-ccccch----hHHHHh---------cCCCCEEEEecC-ChHHHcCh
Confidence 0 1222 278899999999 786 433221 222222 023578899986 99 5543
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 004766 707 PTQKMIDEAADRYGFMAKM 725 (732)
Q Consensus 707 ~~~~~~~~~~~~~~fl~~~ 725 (732)
+. .....+.+.+||.+.
T Consensus 209 ~~--~~~~~~~i~~~L~~~ 225 (244)
T 2cb9_A 209 EF--AEKNANIILNILDKI 225 (244)
T ss_dssp HH--HHHHHHHHHHHHHTC
T ss_pred HH--HHHHHHHHHHHHhcC
Confidence 22 234455667787654
No 401
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.54 E-value=3.2e-05 Score=82.21 Aligned_cols=78 Identities=10% Similarity=0.156 Sum_probs=51.7
Q ss_pred EEEecCCeEEEEeCCC------CCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCE-EEEEEecCCeeEEEEEeC
Q 004766 308 VIANDDTVFTFLTNKD------APKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDL 380 (732)
Q Consensus 308 ~~s~dg~~l~~~s~~~------~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~-l~~~~~~~g~~~l~~~d~ 380 (732)
.+++||+++|+..... .+...|..+|+++.+....+ +-. ....++.+++|++ +++..... ...|.++|.
T Consensus 325 a~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I-~vg--~~P~gia~spDg~~~lyv~n~~-s~~VsVID~ 400 (426)
T 3c75_H 325 AYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKI-ELG--HEIDSINVSQDAEPLLYALSAG-TQTLHIYDA 400 (426)
T ss_dssp EEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEE-EEE--EEECEEEECCSSSCEEEEEETT-TTEEEEEET
T ss_pred EEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEE-ECC--CCcCeEEEccCCCEEEEEEcCC-CCeEEEEEC
Confidence 5789999998764211 12457999999988733333 211 2345678887655 55555532 257999999
Q ss_pred CCCceeeec
Q 004766 381 KNGSLLHQL 389 (732)
Q Consensus 381 ~~g~~~~~l 389 (732)
++++.+++|
T Consensus 401 ~t~kvv~tI 409 (426)
T 3c75_H 401 ATGEELRSV 409 (426)
T ss_dssp TTCCEEEEE
T ss_pred CCCCEEEEe
Confidence 999887776
No 402
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.54 E-value=2.8e-06 Score=93.84 Aligned_cols=220 Identities=11% Similarity=0.070 Sum_probs=128.7
Q ss_pred EEeEEECCC------CcEEEEEEeccCCceEEEEEEECCCCcee------------cccccceeeeeEEEEeCCcEEEEE
Q 004766 134 LIKVSVSED------AKYLAYALSYSGSDWATIKLMRIEDQIVE------------ADALSWFKFSSIAWTHDSKGFFYS 195 (732)
Q Consensus 134 ~~~~~~SPD------G~~la~~~~~~G~e~~~i~v~dl~~g~~~------------~~~~~~~~~~~~~WspDg~~l~y~ 195 (732)
+..++|||+ |++||-+.. + .+|++||+.++... ...........++|+|++ .|+..
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~-D----gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasg 283 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQ-E----GTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCG 283 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEET-T----SCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEE
T ss_pred EEEEEECCCCCCCCCCceEEEEec-C----CeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEE
Confidence 567889997 567775532 2 47999999876421 001111234789999875 56655
Q ss_pred EecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEe--EEecCC-cEEEEEEecCCcceEEEE
Q 004766 196 RYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSG--HVTEDG-QYLVMCIEENCDPVNKVY 272 (732)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~--~~SpDg-~~l~~~~~~~~~~~~~l~ 272 (732)
+.+ ..|.+|++.++... ...+... ...+.++ .++|+| +.|+-.+.+ ..+.
T Consensus 284 s~D-------------------gtV~lWD~~~~~~~-~~~~~~H--~~~V~sv~~~~s~~g~~~laS~S~D-----~tvk 336 (524)
T 2j04_B 284 FKN-------------------GFVAEFDLTDPEVP-SFYDQVH--DSYILSVSTAYSDFEDTVVSTVAVD-----GYFY 336 (524)
T ss_dssp ETT-------------------SEEEEEETTBCSSC-SEEEECS--SSCEEEEEEECCTTSCCEEEEEETT-----SEEE
T ss_pred eCC-------------------CEEEEEECCCCCCc-eEEeecc--cccEEEEEEEcCCCCCeEEEEeccC-----CeEE
Confidence 433 36899999865322 2233332 2345566 678998 655544432 2377
Q ss_pred EEeCCCCCCCcccccccCCCCCcEEeeeccc---ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCC
Q 004766 273 YCDLSALPEGLEGFKKRDGLLPFVKLIDGFD---AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAER 349 (732)
Q Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~ 349 (732)
++|+.++. ....+..... .....|+|+++.++. +.. ...+..+|+.++.....+..+.
T Consensus 337 lWD~~~~~-------------~~~~~~~~~~~~~v~~v~fsp~~~~l~s-~~~---d~tv~lwd~~~~~~~~~l~gH~-- 397 (524)
T 2j04_B 337 IFNPKDIA-------------TTKTTVSRFRGSNLVPVVYCPQIYSYIY-SDG---ASSLRAVPSRAAFAVHPLVSRE-- 397 (524)
T ss_dssp EECGGGHH-------------HHCEEEEECSCCSCCCEEEETTTTEEEE-ECS---SSEEEEEETTCTTCCEEEEECS--
T ss_pred EEECCCCC-------------cccccccccccCcccceEeCCCcCeEEE-eCC---CCcEEEEECcccccceeeecCC--
Confidence 88887632 1112222111 112358999887553 322 2357788988776445566654
Q ss_pred CceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-----cceeeEeecccCCcEE
Q 004766 350 DVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-----IGSVNAISARREDSVV 408 (732)
Q Consensus 350 ~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-----~g~v~~~~~s~d~~~l 408 (732)
..+.++.+++++.++++...|+ .|.+|++. ++.+...... ...+..++++++++.+
T Consensus 398 ~~V~sva~Sp~g~~l~Sgs~Dg--tv~lwd~~-~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 398 TTITAIGVSRLHPMVLAGSADG--SLIITNAA-RRLLHGIKNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp SCEEEEECCSSCCBCEEEETTT--EEECCBSC-SSTTTCC------CCCCEEEECBCCSSSCEE
T ss_pred CceEEEEeCCCCCeEEEEECCC--EEEEEech-HhhccccccCccceeeeEEEEeccCCCCCeE
Confidence 5688899998777788888885 68888875 3222211100 1124466778888744
No 403
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.52 E-value=2.3e-05 Score=84.42 Aligned_cols=208 Identities=9% Similarity=0.023 Sum_probs=120.8
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCC--------CCCCeEEEecCCCCeeEEEeEEe
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK--------QSEDILCWKDPEHPKYIFSGHVT 251 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~--------~~~~~~v~~~~~~~~~~~~~~~S 251 (732)
...++|+|++..++++.. ....|++|++.+. .......+... ......++|+
T Consensus 131 v~~l~~~p~~~~~lat~~------------------~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~~ 190 (430)
T 2xyi_A 131 VNRARYMPQNACVIATKT------------------PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH--QKEGYGLSWN 190 (430)
T ss_dssp CSEEEEETTEEEEEEEEC------------------SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC--SSCCCCEEEC
T ss_pred EEEEEECCCCCcEEEEEC------------------CCCcEEEEECCCcccccCccccCCCcEEecCC--CCCeEEEEeC
Confidence 478999998655655542 1235888888652 11222223222 2234578999
Q ss_pred cCCc-EEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceE
Q 004766 252 EDGQ-YLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKI 329 (732)
Q Consensus 252 pDg~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l 329 (732)
|+++ +|+....+ ..|.++++.++...... ..+...+....... ...|+|++..+++.... ...|
T Consensus 191 ~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~~------~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~---dg~i 256 (430)
T 2xyi_A 191 PNLNGYLLSASDD-----HTICLWDINATPKEHRV------IDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD---DQKL 256 (430)
T ss_dssp TTSTTEEEEECTT-----SCEEEEETTSCCBGGGE------EECSEEECCCSSCEEEEEECSSCTTEEEEEET---TSEE
T ss_pred CCCCCeEEEEeCC-----CeEEEEeCCCCCCCCce------eccceeecCCCCCEeeeEEeCCCCCEEEEEeC---CCeE
Confidence 9999 55544322 23788888763211000 00011221111111 12488855555544433 3478
Q ss_pred EEEeCCCCC---CceEeccCCCCCceeEEEEecCC-EEEEEEecCCeeEEEEEeCCCC-ceeeecccccceeeEeecccC
Q 004766 330 IRVDLKEPN---DWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNG-SLLHQLPIEIGSVNAISARRE 404 (732)
Q Consensus 330 ~~~d~~~~~---~~~~l~~~~~~~~l~~~~~~~~~-~l~~~~~~~g~~~l~~~d~~~g-~~~~~l~~~~g~v~~~~~s~d 404 (732)
..+|+.++. ....+..+. ..+..+.+.+++ .++++...++ .|.+||+.+. +.+..+..+.+.+..+.++++
T Consensus 257 ~i~d~~~~~~~~~~~~~~~~~--~~v~~i~~~p~~~~~l~tg~~dg--~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~ 332 (430)
T 2xyi_A 257 MIWDTRNNNTSKPSHTVDAHT--AEVNCLSFNPYSEFILATGSADK--TVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 332 (430)
T ss_dssp EEEETTCSCSSSCSEEEECCS--SCEEEEEECSSCTTEEEEEETTS--EEEEEETTCTTSCSEEEECCSSCEEEEEECSS
T ss_pred EEEECCCCCCCcceeEeecCC--CCeEEEEeCCCCCCEEEEEeCCC--eEEEEeCCCCCCCeEEeecCCCCEEEEEECCC
Confidence 899988762 233343333 568889998754 4787887775 6899998763 334455545667888899999
Q ss_pred CcEEEEEEecCCCCceEEEEECCC
Q 004766 405 DSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 405 ~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
++.++++.+.. ..+..||+..
T Consensus 333 ~~~~l~s~~~d---~~i~iwd~~~ 353 (430)
T 2xyi_A 333 NETILASSGTD---RRLHVWDLSK 353 (430)
T ss_dssp CTTEEEEEETT---SCCEEEEGGG
T ss_pred CCCEEEEEeCC---CcEEEEeCCC
Confidence 87766665543 4677888765
No 404
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.51 E-value=2.4e-06 Score=90.56 Aligned_cols=200 Identities=9% Similarity=-0.080 Sum_probs=119.9
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc------ccceeeeeEEEEe-CCcEEEEEEecCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA------LSWFKFSSIAWTH-DSKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~------~~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~ 205 (732)
.+..+.|+|++...+++.+. ..+|++||+.+|+.+... ........++|+| |++.|+....+
T Consensus 159 ~v~~~~~~~~~~~~l~s~s~----D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D------- 227 (380)
T 3iz6_a 159 YASSCQYVPDQETRLITGSG----DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD------- 227 (380)
T ss_dssp CCCCCBCCSSSSSCEEEECT----TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-------
T ss_pred ceEEEEEecCCCCEEEEECC----CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-------
Confidence 34567789976543334322 247999999998854311 1111246778876 77766665433
Q ss_pred CCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCccc
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEG 285 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 285 (732)
..|.+|++..... .+..+.. +...+..++|+|||++|+..+.++ .+.++|+.++..
T Consensus 228 ------------~~v~~wd~~~~~~-~~~~~~~--h~~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~~~~~~---- 283 (380)
T 3iz6_a 228 ------------TTVRLWDLRITSR-AVRTYHG--HEGDINSVKFFPDGQRFGTGSDDG-----TCRLFDMRTGHQ---- 283 (380)
T ss_dssp ------------SCEEEEETTTTCC-CCEEECC--CSSCCCEEEECTTSSEEEEECSSS-----CEEEEETTTTEE----
T ss_pred ------------CeEEEEECCCCCc-ceEEECC--cCCCeEEEEEecCCCeEEEEcCCC-----eEEEEECCCCcE----
Confidence 3588899864322 2223332 233456889999999987655433 377889876421
Q ss_pred ccccCCCCCcEEeeecc--------cceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEecc--CCCCCceeEE
Q 004766 286 FKKRDGLLPFVKLIDGF--------DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIP--EAERDVLESA 355 (732)
Q Consensus 286 ~~~~~~~~~~~~l~~~~--------~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~--~~~~~~l~~~ 355 (732)
...+.... ......|+|+|+.|+..+. ++.|..+|+.+++....+.. ......+..+
T Consensus 284 ---------~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~----dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l 350 (380)
T 3iz6_a 284 ---------LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS----NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCL 350 (380)
T ss_dssp ---------EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT----TSCEEEEETTTCCEEEEECCSCSSCCCCCCEE
T ss_pred ---------EEEecccccccccccCceEEEEECCCCCEEEEEEC----CCCEEEEECCCCceEEEEecccCCCCCceEEE
Confidence 11111100 0112358999987765433 34688899877663333311 1223567889
Q ss_pred EEecCCEEEEEEecCCeeEEEEEeCCC
Q 004766 356 TAVNLNQMIVSYLSDVKYVLQIRDLKN 382 (732)
Q Consensus 356 ~~~~~~~l~~~~~~~g~~~l~~~d~~~ 382 (732)
.+++++.++++...|+ .|.+|++..
T Consensus 351 ~~s~dg~~l~sgs~D~--~i~iW~~~~ 375 (380)
T 3iz6_a 351 GLSSDGSALCTGSWDK--NLKIWAFSG 375 (380)
T ss_dssp EECSSSSEEEEECTTS--CEEEEECCS
T ss_pred EECCCCCEEEEeeCCC--CEEEEecCC
Confidence 9998777888888885 688888863
No 405
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.51 E-value=1.2e-05 Score=85.21 Aligned_cols=118 Identities=10% Similarity=-0.015 Sum_probs=74.8
Q ss_pred CCEEEEeEEECC-CCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCc---EEEEEEecCCCCCCC
Q 004766 130 GTAALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSK---GFFYSRYPAPKEGKD 205 (732)
Q Consensus 130 ~~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~---~l~y~~~~~~~~~~~ 205 (732)
+...+..+.|+| ++++|+... .+ ..|++||+.+++.+...........+.|+|++. .|+....+
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~-~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 165 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSS-FD----KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG------- 165 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEE-TT----SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS-------
T ss_pred CCCcEEEEEEccCCCcEEEEEe-CC----CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC-------
Confidence 344578899999 666666442 22 379999999988553322222246788888544 66665432
Q ss_pred CCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCC
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSAL 279 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 279 (732)
..|++|++.++... ..+.. +...+..+.|+|+++++++..... ..+.++|+.++
T Consensus 166 ------------~~v~~~d~~~~~~~--~~~~~--~~~~v~~~~~~~~~~~ll~~~~~d----g~i~i~d~~~~ 219 (408)
T 4a11_B 166 ------------PKVQLCDLKSGSCS--HILQG--HRQEILAVSWSPRYDYILATASAD----SRVKLWDVRRA 219 (408)
T ss_dssp ------------SSEEEEESSSSCCC--EEECC--CCSCEEEEEECSSCTTEEEEEETT----SCEEEEETTCS
T ss_pred ------------CeEEEEeCCCccee--eeecC--CCCcEEEEEECCCCCcEEEEEcCC----CcEEEEECCCC
Confidence 35888998765432 33332 234567899999999765555432 23778888653
No 406
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.51 E-value=1.2e-07 Score=101.62 Aligned_cols=113 Identities=10% Similarity=-0.009 Sum_probs=77.9
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhH-HHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcC
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSR-TILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG 556 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 556 (732)
+...|+||++||..+.. ...|...+ ..+++..+|.|+++|.||+|.... ..+. ..-...-+++.+.+++|.++.
T Consensus 66 ~~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y--~~~~--~~~~~v~~~la~ll~~L~~~~ 140 (449)
T 1hpl_A 66 NTGRKTRFIIHGFIDKG-EESWLSTMCQNMFKVESVNCICVDWKSGSRTAY--SQAS--QNVRIVGAEVAYLVGVLQSSF 140 (449)
T ss_dssp CTTSEEEEEECCCCCTT-CTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCH--HHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEecCCCCC-CccHHHHHHHHHHhcCCeEEEEEeCCcccCCcc--HHHH--HHHHHHHHHHHHHHHHHHHhc
Confidence 45679999999976543 23454433 345554799999999999775431 1110 000112356667777776442
Q ss_pred CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 557 YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 557 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
..+.+++.++|||+||.+++.++.++|++++.++...|.
T Consensus 141 g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa 179 (449)
T 1hpl_A 141 DYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPA 179 (449)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred CCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcc
Confidence 246789999999999999999999999999999876654
No 407
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.49 E-value=4.7e-07 Score=96.81 Aligned_cols=113 Identities=19% Similarity=0.094 Sum_probs=75.4
Q ss_pred CccEEEEEcCCCCccCCCC-cChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcc---ccc----CCccHHHHHHHHHHH
Q 004766 480 SHPCLLYGYGGFNISVTPS-FSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGG---ALA----KKQNCFDDFISASEY 551 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~---~~~----~~~~~~~D~~~~~~~ 551 (732)
..|+ |+.|||.+...... .......+..+.|+.|++.|.||.|..... .... ... .-...++|+...+++
T Consensus 38 g~Pi-~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~-~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~ 115 (446)
T 3n2z_B 38 GGSI-LFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPF-GDNSFKDSRHLNFLTSEQALADFAELIKH 115 (446)
T ss_dssp TCEE-EEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTT-GGGGGSCTTTSTTCSHHHHHHHHHHHHHH
T ss_pred CCCE-EEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCC-CccccccchhhccCCHHHHHHHHHHHHHH
Confidence 3565 55589887532111 122234555556999999999998876321 1000 011 113457888888888
Q ss_pred HHHcC-CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCC
Q 004766 552 LISAG-YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 594 (732)
Q Consensus 552 l~~~~-~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 594 (732)
|...- .....++.++||||||.++++++.++|+++.++|+.++
T Consensus 116 l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssa 159 (446)
T 3n2z_B 116 LKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASA 159 (446)
T ss_dssp HHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETC
T ss_pred HHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEecc
Confidence 87641 12335899999999999999999999999999988654
No 408
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.49 E-value=3.4e-05 Score=79.75 Aligned_cols=228 Identities=8% Similarity=-0.065 Sum_probs=135.3
Q ss_pred EEEEecc--CCceEEEEEEECCCCceeccccc-------ceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcc
Q 004766 147 AYALSYS--GSDWATIKLMRIEDQIVEADALS-------WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLY 217 (732)
Q Consensus 147 a~~~~~~--G~e~~~i~v~dl~~g~~~~~~~~-------~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~ 217 (732)
+|+++.+ |++...|.++|.++++....... +....++++ +++.+|.+.. ..
T Consensus 4 ~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~------------------~~ 63 (328)
T 3dsm_A 4 LFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVN------------------NS 63 (328)
T ss_dssp EEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEG------------------GG
T ss_pred EEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEc------------------CC
Confidence 4666655 44456899999999986532110 001134554 5667777643 23
Q ss_pred cEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEE
Q 004766 218 HEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVK 297 (732)
Q Consensus 218 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 297 (732)
..|.+++..+...... + .... ....+++++|| .|++.. .. ...|+++|++++.. ...
T Consensus 64 ~~v~viD~~t~~~~~~-i-~~~~---~p~~i~~~~~g-~lyv~~-~~---~~~v~~iD~~t~~~-------------~~~ 120 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGR-I-TGFT---SPRYIHFLSDE-KAYVTQ-IW---DYRIFIINPKTYEI-------------TGY 120 (328)
T ss_dssp TEEEEEETTTCCEEEE-E-ECCS---SEEEEEEEETT-EEEEEE-BS---CSEEEEEETTTTEE-------------EEE
T ss_pred CEEEEEECcccEEEEE-c-CCCC---CCcEEEEeCCC-eEEEEE-CC---CCeEEEEECCCCeE-------------EEE
Confidence 4688899887643221 2 2212 23567889999 554443 12 35689999887420 112
Q ss_pred eeecc------cceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 298 LIDGF------DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 298 l~~~~------~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
+..+. ......+ +++++|+... + ....|.++|+++++ ....++.. .....+.+++++++++....+.
T Consensus 121 i~~g~~~~~~~~p~~i~~--~~~~lyv~~~-~-~~~~v~viD~~t~~-~~~~i~~g--~~p~~i~~~~dG~l~v~~~~~~ 193 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ--YGKYVYVNCW-S-YQNRILKIDTETDK-VVDELTIG--IQPTSLVMDKYNKMWTITDGGY 193 (328)
T ss_dssp EECTTCCTTTCBCCCEEE--ETTEEEEEEC-T-TCCEEEEEETTTTE-EEEEEECS--SCBCCCEECTTSEEEEEBCCBC
T ss_pred EEcCCccccCCCcceEEE--ECCEEEEEcC-C-CCCEEEEEECCCCe-EEEEEEcC--CCccceEEcCCCCEEEEECCCc
Confidence 22122 1111123 5778876532 1 13479999998876 22223322 2234567777678777654330
Q ss_pred --------eeEEEEEeCCCCceeeecccccc-eeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 372 --------KYVLQIRDLKNGSLLHQLPIEIG-SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 372 --------~~~l~~~d~~~g~~~~~l~~~~g-~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
...|+++|.++++..+.+..+.+ ....+.++++++.++++-+ .++.+|+.+++
T Consensus 194 ~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~------~v~~~d~~t~~ 255 (328)
T 3dsm_A 194 EGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN------DIWRMPVEADR 255 (328)
T ss_dssp TTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS------SEEEEETTCSS
T ss_pred cCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc------EEEEEECCCCc
Confidence 25899999988887666766532 4567888999988876532 79999998875
No 409
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.49 E-value=3.1e-05 Score=79.16 Aligned_cols=247 Identities=8% Similarity=0.051 Sum_probs=136.7
Q ss_pred EeEEECCCCcEEEEEEe---ccCCceEEEEEEECCCCceecccc-----cceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 135 IKVSVSEDAKYLAYALS---YSGSDWATIKLMRIEDQIVEADAL-----SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~---~~G~e~~~i~v~dl~~g~~~~~~~-----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
.++.|+|||+.++ +.. ..+.....|+++|..+|+...... ......++++++|+..|+++..
T Consensus 21 ~~~~~~~~g~l~~-~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~--------- 90 (314)
T 1pjx_A 21 EGPVFDKNGDFYI-VAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM--------- 90 (314)
T ss_dssp EEEEECTTSCEEE-EETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---------
T ss_pred cCceECCCCCEEE-EEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---------
Confidence 4788999997443 310 001112379999988887543221 1112467899999334665531
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEE-EecCCC--CeeEEEeEEecCCcEEEEEEecCC-----------cceEEEE
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILC-WKDPEH--PKYIFSGHVTEDGQYLVMCIEENC-----------DPVNKVY 272 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v-~~~~~~--~~~~~~~~~SpDg~~l~~~~~~~~-----------~~~~~l~ 272 (732)
...|++++.. +.. ..+ ...... ......+++++||+..+ ...... .....|+
T Consensus 91 ----------~~~l~~~d~~-g~~--~~~~~~~~~~~~~~~~~~i~~d~~g~l~v-~~~~~~~~~~~~~~~~~~~~~~l~ 156 (314)
T 1pjx_A 91 ----------RLGLLVVQTD-GTF--EEIAKKDSEGRRMQGCNDCAFDYEGNLWI-TAPAGEVAPADYTRSMQEKFGSIY 156 (314)
T ss_dssp ----------TTEEEEEETT-SCE--EECCSBCTTSCBCBCCCEEEECTTSCEEE-EECBCBCTTSCCCBTTSSSCEEEE
T ss_pred ----------CCCEEEEeCC-CCE--EEEEeccCCCccccCCcCEEECCCCCEEE-EecCcccccccccccccCCCCeEE
Confidence 1257888765 321 111 111110 11234788999997543 332110 0125788
Q ss_pred EEeCCCCCCCcccccccCCCCCcEEeeecccc-eEEEEE----ecCCeEEEEeCCCCCCceEEEEeCC-CCC--CceEe-
Q 004766 273 YCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA-QYEVIA----NDDTVFTFLTNKDAPKYKIIRVDLK-EPN--DWFEV- 343 (732)
Q Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s----~dg~~l~~~s~~~~~~~~l~~~d~~-~~~--~~~~l- 343 (732)
.++.++ . ...+...... .-..++ ++|+.+|+.... ..+|++++++ ++. ....+
T Consensus 157 ~~~~~g-~--------------~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~---~~~i~~~~~~~~g~~~~~~~~~ 218 (314)
T 1pjx_A 157 CFTTDG-Q--------------MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP---TKKLWSYDIKGPAKIENKKVWG 218 (314)
T ss_dssp EECTTS-C--------------EEEEEEEESSEEEEEEEECTTSCEEEEEEEETT---TTEEEEEEEEETTEEEEEEEEE
T ss_pred EECCCC-C--------------EEEeccCCCCcceEEEecccCCCCCEEEEEECC---CCeEEEEECCCCCccccceEEE
Confidence 888652 2 2222222111 122478 888777765432 3468888865 232 00111
Q ss_pred -ccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEE
Q 004766 344 -IPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVY 422 (732)
Q Consensus 344 -~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y 422 (732)
++........++.+.+++.+++....+ ..|.+++.++|+.+..+..+...+..+.++++++.|+++... ...++
T Consensus 219 ~~~~~~~~~p~~i~~d~~G~l~v~~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~l~ 293 (314)
T 1pjx_A 219 HIPGTHEGGADGMDFDEDNNLLVANWGS--SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE---NNAVW 293 (314)
T ss_dssp ECCCCSSCEEEEEEEBTTCCEEEEEETT--TEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT---TTEEE
T ss_pred ECCCCCCCCCCceEECCCCCEEEEEcCC--CEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCC---CCeEE
Confidence 111100345667777767787776544 378999987677655666554556677778898877766433 35789
Q ss_pred EEECCC
Q 004766 423 QCNLKT 428 (732)
Q Consensus 423 ~~d~~~ 428 (732)
++++..
T Consensus 294 ~~~~~~ 299 (314)
T 1pjx_A 294 KFEWQR 299 (314)
T ss_dssp EEECSS
T ss_pred EEeCCC
Confidence 998764
No 410
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.48 E-value=6.3e-05 Score=81.05 Aligned_cols=228 Identities=13% Similarity=0.096 Sum_probs=135.2
Q ss_pred EECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCc
Q 004766 138 SVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNL 216 (732)
Q Consensus 138 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~ 216 (732)
.+++||++|+.... ...|++||+.+++.+.... .......++| |++.|+....+
T Consensus 138 ~~~~d~~~l~~g~~-----dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~d------------------ 192 (435)
T 1p22_A 138 CLQYDDQKIVSGLR-----DNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSD------------------ 192 (435)
T ss_dssp EEECCSSEEEEEES-----SSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETT------------------
T ss_pred EEEECCCEEEEEeC-----CCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCC------------------
Confidence 46679999886642 2479999999988543221 1112356666 88877776533
Q ss_pred ccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcE
Q 004766 217 YHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFV 296 (732)
Q Consensus 217 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 296 (732)
..|.+|++.++.. +..+. .+...+..+.++ +..++..+.+ ..|.++|+.++. .....
T Consensus 193 -g~i~vwd~~~~~~--~~~~~--~h~~~v~~l~~~--~~~l~s~s~d-----g~i~vwd~~~~~-----------~~~~~ 249 (435)
T 1p22_A 193 -STVRVWDVNTGEM--LNTLI--HHCEAVLHLRFN--NGMMVTCSKD-----RSIAVWDMASPT-----------DITLR 249 (435)
T ss_dssp -SCEEEEESSSCCE--EEEEC--CCCSCEEEEECC--TTEEEEEETT-----SCEEEEECSSSS-----------CCEEE
T ss_pred -CeEEEEECCCCcE--EEEEc--CCCCcEEEEEEc--CCEEEEeeCC-----CcEEEEeCCCCC-----------Cceee
Confidence 3588999877642 12222 233345567775 4465554433 237888887642 11111
Q ss_pred EeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEE
Q 004766 297 KLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQ 376 (732)
Q Consensus 297 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~ 376 (732)
....+....+..+..+++.++..+. +..|..+|+.++.....+..+. ..+..+.+.+ .++++...++ .|.
T Consensus 250 ~~~~~~~~~v~~~~~~~~~l~s~~~----dg~i~vwd~~~~~~~~~~~~~~--~~v~~~~~~~--~~l~~g~~dg--~i~ 319 (435)
T 1p22_A 250 RVLVGHRAAVNVVDFDDKYIVSASG----DRTIKVWNTSTCEFVRTLNGHK--RGIACLQYRD--RLVVSGSSDN--TIR 319 (435)
T ss_dssp EEECCCSSCEEEEEEETTEEEEEET----TSEEEEEETTTCCEEEEEECCS--SCEEEEEEET--TEEEEEETTS--CEE
T ss_pred eEecCCCCcEEEEEeCCCEEEEEeC----CCeEEEEECCcCcEEEEEcCCC--CcEEEEEeCC--CEEEEEeCCC--eEE
Confidence 2222233333344557887776544 3468899998876444444343 4566677643 4555666664 689
Q ss_pred EEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 377 IRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 377 ~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
+||+.+|+.+..+..+...+..+.+ ++..++ +.+. -..+..+|+.++
T Consensus 320 iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~-sg~~---dg~i~vwd~~~~ 366 (435)
T 1p22_A 320 LWDIECGACLRVLEGHEELVRCIRF--DNKRIV-SGAY---DGKIKVWDLVAA 366 (435)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEC--CSSEEE-EEET---TSCEEEEEHHHH
T ss_pred EEECCCCCEEEEEeCCcCcEEEEEe--cCCEEE-EEeC---CCcEEEEECCCC
Confidence 9999988876677655566766665 566544 3332 256888887543
No 411
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.45 E-value=3.5e-05 Score=78.36 Aligned_cols=206 Identities=11% Similarity=0.024 Sum_probs=112.8
Q ss_pred CEEEEeEEECCC--CcEEEEEEeccCCceEEEEEEECCCCceec---ccccceeeeeEEEEeC--CcEEEEEEecCCCCC
Q 004766 131 TAALIKVSVSED--AKYLAYALSYSGSDWATIKLMRIEDQIVEA---DALSWFKFSSIAWTHD--SKGFFYSRYPAPKEG 203 (732)
Q Consensus 131 ~~~~~~~~~SPD--G~~la~~~~~~G~e~~~i~v~dl~~g~~~~---~~~~~~~~~~~~WspD--g~~l~y~~~~~~~~~ 203 (732)
...+..+.|||+ |++||-.. ...+|++||+++++... ..........++|+|| |+.|+....+
T Consensus 53 ~~~V~~v~~s~~~~g~~l~s~s-----~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d----- 122 (297)
T 2pm7_B 53 EGPVWRVDWAHPKFGTILASCS-----YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD----- 122 (297)
T ss_dssp SSCEEEEEECCGGGCSEEEEEE-----TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----
T ss_pred cCCeEEEEecCCCcCCEEEEEc-----CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-----
Confidence 345778899874 88877543 22489999999875211 1111223478999998 7777766533
Q ss_pred CCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecC-------------CcEEEEEEecCCcceEE
Q 004766 204 KDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTED-------------GQYLVMCIEENCDPVNK 270 (732)
Q Consensus 204 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpD-------------g~~l~~~~~~~~~~~~~ 270 (732)
..|.+|++.++.......+.. +...+..++|+|+ +++|+..+.++ .
T Consensus 123 --------------~~v~~wd~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~-----~ 181 (297)
T 2pm7_B 123 --------------GKVSVVEFKENGTTSPIIIDA--HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----L 181 (297)
T ss_dssp --------------SEEEEEEBCSSSCBCCEEEEC--CSSCEEEEEECCCC------------CCEEEEEETTS-----C
T ss_pred --------------CcEEEEEecCCCceeeeeeec--ccCccceEeecCCcccccccCCCCCCcceEEEEcCCC-----c
Confidence 368888887653222233332 2234567899997 45666554332 2
Q ss_pred EEEEeCCCCCCCcccccccCCCCCcEEeeecccceE-EEEEecC--CeEEEEeCCCCCCceEEEEeCCCCC-Cce-Eecc
Q 004766 271 VYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDD--TVFTFLTNKDAPKYKIIRVDLKEPN-DWF-EVIP 345 (732)
Q Consensus 271 l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg--~~l~~~s~~~~~~~~l~~~d~~~~~-~~~-~l~~ 345 (732)
|.++|+.++... ......+........ ..|+|++ ..+++....+ ..|..+|+.+.. .+. .++.
T Consensus 182 v~lwd~~~~~~~---------~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D---~~v~iWd~~~~~~~~~~~~~~ 249 (297)
T 2pm7_B 182 VKIWKYNSDAQT---------YVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD---RTCIIWTQDNEQGPWKKTLLK 249 (297)
T ss_dssp EEEEEEETTTTE---------EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT---SCEEEEEESSTTSCCEEEESS
T ss_pred EEEEEEcCCCce---------EEEEEEecCCCCceEEEEECCCCCCceEEEEEECC---CcEEEEEeCCCCCccceeeee
Confidence 666676542100 000112221111112 2488985 3333333332 246666665532 122 2331
Q ss_pred -CCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCC
Q 004766 346 -EAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLK 381 (732)
Q Consensus 346 -~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~ 381 (732)
......+..+.|++++.++++...++ .|.+|+..
T Consensus 250 ~~~~~~~v~~~~~s~~g~~las~~~D~--~v~lw~~~ 284 (297)
T 2pm7_B 250 EEKFPDVLWRASWSLSGNVLALSGGDN--KVTLWKEN 284 (297)
T ss_dssp SSCCSSCEEEEEECSSSCCEEEEETTS--CEEEEEEC
T ss_pred cccCCCcEEEEEECCCCCEEEEEcCCC--cEEEEEEC
Confidence 22235677889998777777777776 45566543
No 412
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.43 E-value=3.5e-07 Score=98.16 Aligned_cols=112 Identities=9% Similarity=0.060 Sum_probs=75.3
Q ss_pred CCCccEEEEEcCCCCccCCCCcChhH-HHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcC
Q 004766 478 DGSHPCLLYGYGGFNISVTPSFSVSR-TILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG 556 (732)
Q Consensus 478 ~~~~P~vv~~hG~~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 556 (732)
+...|+||++||..+.. ...|...+ ..++...||.|+++|+||+|... +..+. ..-....+|+.+.+++|.++.
T Consensus 67 ~~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~--~~~~~~a~~l~~ll~~L~~~~ 141 (450)
T 1rp1_A 67 QTDKKTRFIIHGFIDKG-EENWLLDMCKNMFKVEEVNCICVDWKKGSQTS--YTQAA--NNVRVVGAQVAQMLSMLSANY 141 (450)
T ss_dssp CTTSEEEEEECCCCCTT-CTTHHHHHHHHHTTTCCEEEEEEECHHHHSSC--HHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEccCCCCC-CcchHHHHHHHHHhcCCeEEEEEeCccccCCc--chHHH--HHHHHHHHHHHHHHHHHHHhc
Confidence 35679999999976543 22444433 34455348999999999976432 11110 001122356667777776432
Q ss_pred CCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCc
Q 004766 557 YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 595 (732)
Q Consensus 557 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 595 (732)
..+.+++.++|||+||.+++.++.++|+ ++.++...|.
T Consensus 142 g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa 179 (450)
T 1rp1_A 142 SYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPV 179 (450)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCC
T ss_pred CCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcc
Confidence 2457899999999999999999999999 8888866554
No 413
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.43 E-value=9.8e-07 Score=77.80 Aligned_cols=97 Identities=11% Similarity=0.002 Sum_probs=64.9
Q ss_pred ccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccC
Q 004766 458 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 537 (732)
Q Consensus 458 s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 537 (732)
..+| .++.+... ++.|.||++| +.. ..|... |+ ++|.|+.+|+||.|..... .
T Consensus 8 ~~~g-~~~~~~~~--------g~~~~vv~~H-~~~----~~~~~~----l~-~~~~v~~~d~~G~G~s~~~--------~ 60 (131)
T 2dst_A 8 HLYG-LNLVFDRV--------GKGPPVLLVA-EEA----SRWPEA----LP-EGYAFYLLDLPGYGRTEGP--------R 60 (131)
T ss_dssp EETT-EEEEEEEE--------CCSSEEEEES-SSG----GGCCSC----CC-TTSEEEEECCTTSTTCCCC--------C
T ss_pred EECC-EEEEEEEc--------CCCCeEEEEc-CCH----HHHHHH----Hh-CCcEEEEECCCCCCCCCCC--------C
Confidence 3478 77754422 2357899999 211 123322 55 6699999999998754211 1
Q ss_pred CccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCe
Q 004766 538 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL 585 (732)
Q Consensus 538 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~ 585 (732)
. . ++++.+.+..+++. .+.+++.++|+|+||.++..++.++|.+
T Consensus 61 ~-~-~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~l 104 (131)
T 2dst_A 61 M-A-PEELAHFVAGFAVM--MNLGAPWVLLRGLGLALGPHLEALGLRA 104 (131)
T ss_dssp C-C-HHHHHHHHHHHHHH--TTCCSCEEEECGGGGGGHHHHHHTTCCE
T ss_pred C-C-HHHHHHHHHHHHHH--cCCCccEEEEEChHHHHHHHHHhcCCcE
Confidence 1 1 66666666655554 2446899999999999999999999964
No 414
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.43 E-value=1e-05 Score=83.52 Aligned_cols=107 Identities=9% Similarity=-0.060 Sum_probs=66.6
Q ss_pred EEEEeEEECC--CCcEEEEEEeccCCceEEEEEEECCCCce---------ec-ccccceeeeeEEEEeC--CcEEEEEEe
Q 004766 132 AALIKVSVSE--DAKYLAYALSYSGSDWATIKLMRIEDQIV---------EA-DALSWFKFSSIAWTHD--SKGFFYSRY 197 (732)
Q Consensus 132 ~~~~~~~~SP--DG~~la~~~~~~G~e~~~i~v~dl~~g~~---------~~-~~~~~~~~~~~~WspD--g~~l~y~~~ 197 (732)
..+..+.|+| ||++|+.... + ..|++||+.+++. +. ..........++|+|+ ++.|+....
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~~-d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 132 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASASY-D----KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN 132 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEET-T----SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred CcEEEEEEcCCCCCCEEEEEcC-C----CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC
Confidence 3477899999 6998886642 2 3799999988731 11 1111223578999999 988887653
Q ss_pred cCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEec---------CCCCeeEEEeEEecC---CcEEEEEEe
Q 004766 198 PAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKD---------PEHPKYIFSGHVTED---GQYLVMCIE 262 (732)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~---------~~~~~~~~~~~~SpD---g~~l~~~~~ 262 (732)
+ ..|++|++.++......-... .........+.|+|+ ++.++....
T Consensus 133 d-------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~ 190 (351)
T 3f3f_A 133 D-------------------GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL 190 (351)
T ss_dssp T-------------------CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET
T ss_pred C-------------------CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecC
Confidence 3 368888887654322111100 011223457889997 887776653
No 415
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.43 E-value=0.00015 Score=72.27 Aligned_cols=207 Identities=8% Similarity=-0.036 Sum_probs=125.4
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
..++.|+|++++|.++ +... ..|++++++++......... ....+++++|+++.||++..
T Consensus 38 ~~gi~~d~~~~~ly~~-d~~~---~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~--------------- 98 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWT-DISE---PSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS--------------- 98 (267)
T ss_dssp EEEEEEETTTTEEEEE-ETTT---TEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET---------------
T ss_pred EEEEEEecCCCEEEEE-ECCC---CEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC---------------
Confidence 4588999998887665 3332 37999999876532211111 13478999999888887732
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
...+|++.++.+.. ...+.... .....+++++|++.+|++...... ...|+.+++++..
T Consensus 99 ---~~~~I~~~~~~g~~--~~~~~~~~--~~~P~~i~vd~~~g~lyv~~~~~~--~~~I~~~~~dg~~------------ 157 (267)
T 1npe_A 99 ---QLDRIEVAKMDGTQ--RRVLFDTG--LVNPRGIVTDPVRGNLYWTDWNRD--NPKIETSHMDGTN------------ 157 (267)
T ss_dssp ---TTTEEEEEETTSCS--CEEEECSS--CSSEEEEEEETTTTEEEEEECCSS--SCEEEEEETTSCC------------
T ss_pred ---CCCEEEEEEcCCCC--EEEEEECC--CCCccEEEEeeCCCEEEEEECCCC--CcEEEEEecCCCC------------
Confidence 23468888876432 22333221 123357899999888877653211 3568888876521
Q ss_pred CCcEEeee-ccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecC
Q 004766 293 LPFVKLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSD 370 (732)
Q Consensus 293 ~~~~~l~~-~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~ 370 (732)
.+.+.. +.. ..-..++++++.||+.... ..+|+++++++.. ...++... ..-.++.... +.+|++...+
T Consensus 158 --~~~~~~~~~~~P~gia~d~~~~~lyv~d~~---~~~I~~~~~~g~~-~~~~~~~~--~~P~gi~~d~-~~lyva~~~~ 228 (267)
T 1npe_A 158 --RRILAQDNLGLPNGLTFDAFSSQLCWVDAG---THRAECLNPAQPG-RRKVLEGL--QYPFAVTSYG-KNLYYTDWKT 228 (267)
T ss_dssp --CEEEECTTCSCEEEEEEETTTTEEEEEETT---TTEEEEEETTEEE-EEEEEECC--CSEEEEEEET-TEEEEEETTT
T ss_pred --cEEEEECCCCCCcEEEEcCCCCEEEEEECC---CCEEEEEecCCCc-eEEEecCC--CCceEEEEeC-CEEEEEECCC
Confidence 122221 111 1122578888888875443 3579999987654 33343322 2234566554 7888876554
Q ss_pred CeeEEEEEeCCCCceeeeccc
Q 004766 371 VKYVLQIRDLKNGSLLHQLPI 391 (732)
Q Consensus 371 g~~~l~~~d~~~g~~~~~l~~ 391 (732)
.+|+++|.++|+.++.|..
T Consensus 229 --~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 229 --NSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp --TEEEEEETTTTEEEEEECC
T ss_pred --CeEEEEeCCCCCceEEEcc
Confidence 4799999988887666653
No 416
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.43 E-value=2.1e-05 Score=82.28 Aligned_cols=260 Identities=7% Similarity=-0.097 Sum_probs=136.9
Q ss_pred CCcEEEEEEeccCCceE-EEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEE
Q 004766 142 DAKYLAYALSYSGSDWA-TIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEF 220 (732)
Q Consensus 142 DG~~la~~~~~~G~e~~-~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v 220 (732)
+..+ +|+.+.+++.-. ++.|+|+++++.+.....+.. .++++||||+.+|.+...... + ....+...|
T Consensus 30 ~~~~-~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~-P~i~~spDg~~lyVan~~~~r-------~--~~G~~~~~V 98 (368)
T 1mda_H 30 ISRR-SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL-SLAVAGHSGSDFALASTSFAR-------S--AKGKRTDYV 98 (368)
T ss_dssp CTTE-EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTT-CEEEECTTSSCEEEEEEEETT-------T--TSSSEEEEE
T ss_pred CCCe-EEEECCccCCccceEEEEECCCCeEEEEEeCCCC-CceEECCCCCEEEEEcccccc-------c--ccCCCCCEE
Confidence 3344 677766543112 899999999997643322222 379999999999887532100 0 001234678
Q ss_pred EEEECCCCCCCCeEEEecC------CCCeeEEEeEEecCCcEEEEEEecCCcceEEEEE--EeCCC------CCCCcccc
Q 004766 221 YYHFLGTKQSEDILCWKDP------EHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYY--CDLSA------LPEGLEGF 286 (732)
Q Consensus 221 ~~~~lgt~~~~~~~v~~~~------~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~--~d~~~------~~~~~~~~ 286 (732)
..+|+.+.+....+..... ..+ ..+.+||||+++++..... .+.+.+ +|+.+ +.+. .+
T Consensus 99 sviD~~T~~vv~~I~v~~~~~~~~g~~P---~~ia~SpDGk~lyVan~~~---~~~v~V~~iD~~tv~~i~v~~~~--~~ 170 (368)
T 1mda_H 99 EVFDPVTFLPIADIELPDAPRFSVGPRV---HIIGNCASSACLLFFLFGS---SAAAGLSVPGASDDQLTKSASCF--HI 170 (368)
T ss_dssp EEECTTTCCEEEEEEETTSCSCCBSCCT---TSEEECTTSSCEEEEECSS---SCEEEEEETTTEEEEEEECSSCC--CC
T ss_pred EEEECCCCCEEEEEECCCccccccCCCc---ceEEEcCCCCEEEEEccCC---CCeEEEEEEchhhceEEECCCce--EE
Confidence 8889887654322222100 112 2578999999987764321 133555 55533 0000 00
Q ss_pred cccC--------CCCCcEEeeecc----cce-------------EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCce
Q 004766 287 KKRD--------GLLPFVKLIDGF----DAQ-------------YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWF 341 (732)
Q Consensus 287 ~~~~--------~~~~~~~l~~~~----~~~-------------~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~ 341 (732)
.+++ ..-.+..+.... +.. .+..+++++.+++.+. ..++.+|+.+.. .
T Consensus 171 ~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-----~~V~viD~~~~~--~ 243 (368)
T 1mda_H 171 HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-----SSILQGDIPAAG--A 243 (368)
T ss_dssp EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-----SCCEEEECCSSC--C
T ss_pred ccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-----CEEEEEECCCCc--c
Confidence 0000 000000000000 000 0001455566666554 357778876543 1
Q ss_pred EeccCC---------CCC---ceeEEEEecC-CEEEEEEecC-C-----eeEEEEEeCCCCceeeecccccceeeEeecc
Q 004766 342 EVIPEA---------ERD---VLESATAVNL-NQMIVSYLSD-V-----KYVLQIRDLKNGSLLHQLPIEIGSVNAISAR 402 (732)
Q Consensus 342 ~l~~~~---------~~~---~l~~~~~~~~-~~l~~~~~~~-g-----~~~l~~~d~~~g~~~~~l~~~~g~v~~~~~s 402 (732)
.++..- ... ....+.++++ +++|+..... + ...+.++|+++++.+.+|+.+. ....+.++
T Consensus 244 ~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s 322 (368)
T 1mda_H 244 TMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAA 322 (368)
T ss_dssp EEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEEC
T ss_pred eEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEEC
Confidence 111100 000 0111556765 6677765523 3 2345699999888878887654 34577889
Q ss_pred cCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 403 REDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 403 ~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+|++.++++... ....+..+|+.+++
T Consensus 323 ~Dg~~l~va~~~--~~~~VsVID~~t~k 348 (368)
T 1mda_H 323 QDGASDNYANSA--GTEVLDIYDAASDQ 348 (368)
T ss_dssp CSSSCEEEEEET--TTTEEEEEESSSCE
T ss_pred CCCCEEEEEccC--CCCeEEEEECCCCc
Confidence 999888776551 13689999998874
No 417
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.40 E-value=0.00022 Score=73.55 Aligned_cols=247 Identities=9% Similarity=0.050 Sum_probs=135.8
Q ss_pred EEeEEECCCCcEEEEEEeccCCc---------------------eEEEEEEECCCCceecccccc--eeeeeEEEEeCCc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSD---------------------WATIKLMRIEDQIVEADALSW--FKFSSIAWTHDSK 190 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e---------------------~~~i~v~dl~~g~~~~~~~~~--~~~~~~~WspDg~ 190 (732)
+.+++++|||+.++.. ..+.. ..+|+++|.++|+.+...... ....+++++|||+
T Consensus 26 v~~va~d~~G~l~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 26 VSGVALDSKNNLVIFH--RGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp EEEEEECTTCCEEEEE--CTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred ceEEEECCCCCEEEEe--CCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 5688999999866432 22210 026999999988865322111 1236789999998
Q ss_pred EEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEec-------CCCCeeEEEeEEecCCcEEEEEEec
Q 004766 191 GFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKD-------PEHPKYIFSGHVTEDGQYLVMCIEE 263 (732)
Q Consensus 191 ~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~-------~~~~~~~~~~~~SpDg~~l~~~~~~ 263 (732)
|+++. ....+|++++..+... .+..+.. ........+++++|++..|++....
T Consensus 104 -l~v~d------------------~~~~~v~~~~~~g~~~-~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~ 163 (329)
T 3fvz_A 104 -YWVTD------------------VALHQVFKLDPHSKEG-PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY 163 (329)
T ss_dssp -EEEEE------------------TTTTEEEEECTTCSSC-CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS
T ss_pred -EEEEE------------------CCCCEEEEEeCCCCeE-EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC
Confidence 65552 1234688888754321 1122211 1111234688999944444444321
Q ss_pred CCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-c---------cc-ceEEEEEecCCeEEEEeCCCCCCceEEEE
Q 004766 264 NCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-G---------FD-AQYEVIANDDTVFTFLTNKDAPKYKIIRV 332 (732)
Q Consensus 264 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~---------~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~ 332 (732)
. ...|++++.++.. ...+.. + .. ..-..++++++.||+.... +.+|.++
T Consensus 164 -~--~~~I~~~~~~g~~--------------~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~---~~~I~~~ 223 (329)
T 3fvz_A 164 -C--NSRIVQFSPSGKF--------------VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE---NGRIQCF 223 (329)
T ss_dssp -S--CCEEEEECTTSCE--------------EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT---TTEEEEE
T ss_pred -C--CCeEEEEcCCCCE--------------EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC---CCEEEEE
Confidence 1 3568888854411 111110 0 00 1112477886778765432 4579999
Q ss_pred eCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecC-----CeeEEEEEeCCCCceeeeccc---ccceeeEeecccC
Q 004766 333 DLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSD-----VKYVLQIRDLKNGSLLHQLPI---EIGSVNAISARRE 404 (732)
Q Consensus 333 d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~-----g~~~l~~~d~~~g~~~~~l~~---~~g~v~~~~~s~d 404 (732)
+.++++....+........+..+.+.+ +.++...... ....+++++..+|+.+..+.. .......++++++
T Consensus 224 ~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~d 302 (329)
T 3fvz_A 224 KTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASED 302 (329)
T ss_dssp ETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTT
T ss_pred ECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCC
Confidence 988665333332222223455677777 5555443221 124789999888887665531 2234557778888
Q ss_pred CcEEEEEEecCCCCceEEEEECC
Q 004766 405 DSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 405 ~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
| .++++-.. ..+++++++.
T Consensus 303 G-~lyvad~~---~~~I~~~~~~ 321 (329)
T 3fvz_A 303 G-TVYIGDAH---TNTVWKFTLT 321 (329)
T ss_dssp S-EEEEEESS---SCCEEEEEEE
T ss_pred C-CEEEEECC---CCEEEEEeCC
Confidence 8 56654332 3467777654
No 418
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.39 E-value=1.3e-06 Score=85.39 Aligned_cols=90 Identities=9% Similarity=0.018 Sum_probs=62.1
Q ss_pred CccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCC
Q 004766 480 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 559 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 559 (732)
..|.|+++||..+.. ..|. .+...|. . +.|+.+|++|.+. ..+|+.+.++.+..
T Consensus 16 ~~~~l~~~hg~~~~~--~~~~-~~~~~l~-~-~~v~~~d~~g~~~----------------~~~~~~~~i~~~~~----- 69 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYG--LMYQ-NLSSRLP-S-YKLCAFDFIEEED----------------RLDRYADLIQKLQP----- 69 (230)
T ss_dssp CSEEEEEECCTTCCG--GGGH-HHHHHCT-T-EEEEEECCCCSTT----------------HHHHHHHHHHHHCC-----
T ss_pred CCCCEEEECCCCCch--HHHH-HHHHhcC-C-CeEEEecCCCHHH----------------HHHHHHHHHHHhCC-----
Confidence 357899999987653 2333 2345566 5 9999999998542 23466666655421
Q ss_pred CCcEEEEecChhHHHHHHHHhhC---CCeeeEEEEcCCc
Q 004766 560 SRKLCIEGGSNGGLLVGACINQR---PDLFGCALAHVGV 595 (732)
Q Consensus 560 ~~~i~i~G~S~GG~l~~~~~~~~---p~~f~a~v~~~p~ 595 (732)
.+++.++|+|+||.++..++.+. ++..+.+|+..+.
T Consensus 70 ~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~ 108 (230)
T 1jmk_C 70 EGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSY 108 (230)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCC
Confidence 25799999999999999888764 4567777766554
No 419
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.38 E-value=1e-06 Score=91.00 Aligned_cols=110 Identities=9% Similarity=-0.010 Sum_probs=77.2
Q ss_pred CccEEEEEcCCCCccC--------CCCc----ChhHHHHHHhcCcE---EEEEcccCCCCCchhHHhcccccCCccHHHH
Q 004766 480 SHPCLLYGYGGFNISV--------TPSF----SVSRTILMRHLGAV---FCIANIRGGGEYGEEWHKGGALAKKQNCFDD 544 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~--------~~~~----~~~~~~~l~~~G~~---v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D 544 (732)
..+.||++||..+... ...| .. +...|.++||. |+.+|+||.|..... ..........++
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~-l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~----~~~~~~~~~~~~ 113 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARS-VYAELKARGYNDCEIFGVTYLSSSEQGSA----QYNYHSSTKYAI 113 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSC-HHHHHHHTTCCTTSEEEECCSCHHHHTCG----GGCCBCHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHH-HHHHHHhCCCCCCeEEEEeCCCCCccCCc----cccCCHHHHHHH
Confidence 3455899999877431 2344 43 44556658998 999999986531100 001122345788
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhC--CCeeeEEEEcCCcc
Q 004766 545 FISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR--PDLFGCALAHVGVM 596 (732)
Q Consensus 545 ~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~--p~~f~a~v~~~p~~ 596 (732)
+.+.++.+.+. ...+++.++||||||+++..++.++ |++++.+|+..|..
T Consensus 114 l~~~I~~l~~~--~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 114 IKTFIDKVKAY--TGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGI 165 (342)
T ss_dssp HHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCT
T ss_pred HHHHHHHHHHH--hCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCc
Confidence 88888888765 2346899999999999999999988 89999999877654
No 420
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.36 E-value=0.00018 Score=76.80 Aligned_cols=203 Identities=11% Similarity=0.073 Sum_probs=118.5
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
...+++|+|||+ +|+.+..+ ..|+++|++++............. ++|+|||+.|+.+...
T Consensus 132 ~P~~la~d~~g~--lyv~d~~~---~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~-------------- 191 (409)
T 3hrp_A 132 YMWGIAAVGNNT--VLAYQRDD---PRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWE-------------- 191 (409)
T ss_dssp CEEEEEECSTTE--EEEEETTT---TEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSS--------------
T ss_pred CceEEEEeCCCC--EEEEecCC---CcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecC--------------
Confidence 456788999998 45555433 379999999887543222221224 9999999987776321
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEec-CCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKD-PEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
....|++++..++... ..+-.. ........+++++|++..|++. . . ...|+.++.+++.
T Consensus 192 ---~~~~I~~~d~~~~~~~-~~~g~~~~~~~~~p~~iav~p~~g~lyv~-d-~---~~~I~~~d~~~~~----------- 251 (409)
T 3hrp_A 192 ---GTHTVYVYMKASGWAP-TRIGQLGSTFSGKIGAVALDETEEWLYFV-D-S---NKNFGRFNVKTQE----------- 251 (409)
T ss_dssp ---TTCEEEEEEGGGTTCE-EEEEECCTTSCSCCCBCEECTTSSEEEEE-C-T---TCEEEEEETTTCC-----------
T ss_pred ---CCceEEEEEcCCCcee-EEeeeccchhcCCcEEEEEeCCCCeEEEE-E-C---CCcEEEEECCCCC-----------
Confidence 1227888887654321 111010 1011223478899977777663 2 2 3469999987642
Q ss_pred CCCcEEe----ee---cccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC-------------CCC
Q 004766 292 LLPFVKL----ID---GFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-------------ERD 350 (732)
Q Consensus 292 ~~~~~~l----~~---~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~-------------~~~ 350 (732)
...+ .. ..... ...++|+++.||+... .+.+|++++.++. ...+.... .-.
T Consensus 252 ---~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~---~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~ 323 (409)
T 3hrp_A 252 ---VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ---NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFA 323 (409)
T ss_dssp ---EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET---TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCS
T ss_pred ---EEEEecccccCCCCCCccccEEEeCCCCEEEEEeC---CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeC
Confidence 1111 11 11111 3358887788887543 2457999987653 23333221 012
Q ss_pred ceeEEEEecCCEEEEEEe-cCCeeEEEEEeCCCCce
Q 004766 351 VLESATAVNLNQMIVSYL-SDVKYVLQIRDLKNGSL 385 (732)
Q Consensus 351 ~l~~~~~~~~~~l~~~~~-~~g~~~l~~~d~~~g~~ 385 (732)
...++.+.+++.||++.. .+ .+|+++++.+|+.
T Consensus 324 ~P~gia~d~dG~lyvad~~~~--~~I~~~~~~~G~v 357 (409)
T 3hrp_A 324 QPNGMTVDEDGNFYIVDGFKG--YCLRKLDILDGYV 357 (409)
T ss_dssp SEEEEEECTTCCEEEEETTTT--CEEEEEETTTTEE
T ss_pred CCeEEEEeCCCCEEEEeCCCC--CEEEEEECCCCEE
Confidence 346788887667777754 44 6899999666764
No 421
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.34 E-value=1e-05 Score=86.10 Aligned_cols=211 Identities=8% Similarity=-0.121 Sum_probs=108.3
Q ss_pred CCCEEEEeEEECC--------CCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccceeeeeEEEEeCCcEEEEEEecC
Q 004766 129 DGTAALIKVSVSE--------DAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWFKFSSIAWTHDSKGFFYSRYPA 199 (732)
Q Consensus 129 ~~~~~~~~~~~SP--------DG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~ 199 (732)
++.-.+..+.||| ||++||-.. +..+|+|||+.++..+... ........++|+|++..++.+..
T Consensus 134 gH~~~v~~v~~~p~~~~~~~~d~~~las~s-----~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~-- 206 (393)
T 4gq1_A 134 GHHNFVNDIDIADVYSADNRLAEQVIASVG-----DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGE-- 206 (393)
T ss_dssp SCSSCEEEEEEEEEECTTCSEEEEEEEEEE-----TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEE--
T ss_pred CCCCceEEEEEccccccccCCCCCEEEEEE-----CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecC--
Confidence 3445678899998 999988553 3358999999877643221 11223468999999876555432
Q ss_pred CCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEec---------------------CCCCeeEEEeEEe-cCCcEE
Q 004766 200 PKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKD---------------------PEHPKYIFSGHVT-EDGQYL 257 (732)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~---------------------~~~~~~~~~~~~S-pDg~~l 257 (732)
....|.+|++.++.......... .........+.|+ |||+.|
T Consensus 207 ----------------~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l 270 (393)
T 4gq1_A 207 ----------------RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGI 270 (393)
T ss_dssp ----------------TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEE
T ss_pred ----------------CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEE
Confidence 22367888887654221110000 0011112345565 899998
Q ss_pred EEEEecCCcceEEEEEEeCCCCCCCcccccccCC-----CC-CcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEE
Q 004766 258 VMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG-----LL-PFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIR 331 (732)
Q Consensus 258 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-----~~-~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~ 331 (732)
+....+ ..+.++|+..++.......+... .. ..+............+.+..+.+++.+. .....|..
T Consensus 271 ~s~s~d-----~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg--s~Dg~V~l 343 (393)
T 4gq1_A 271 LAMCKS-----GAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH--SQHGLIQL 343 (393)
T ss_dssp EEECTT-----SEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE--TTTTEEEE
T ss_pred EEEeCC-----CCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE--CCCCEEEE
Confidence 755432 34667777654321000000000 00 0000000000001124443344444432 22457889
Q ss_pred EeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 332 VDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 332 ~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
+|+.++.....+..+. ..+.++.|++++..++...++|
T Consensus 344 wd~~~~~~~~~~~~~~--~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 344 INTYEKDSNSIPIQLG--MPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp EETTCTTCCEEEEECS--SCEEEEEECTTSSEEEEEESSE
T ss_pred EECCCCcEEEEecCCC--CcEEEEEEcCCCCEEEEEeCCC
Confidence 9998876445555544 5788999999877777777775
No 422
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.33 E-value=0.00011 Score=74.83 Aligned_cols=220 Identities=10% Similarity=0.001 Sum_probs=106.0
Q ss_pred EEEEeEEECCC----CcEEEEEEeccCCceEEEEEEECCCCceecccc--cceeeeeEEEEeCCcEEEEEEecCCCCC-C
Q 004766 132 AALIKVSVSED----AKYLAYALSYSGSDWATIKLMRIEDQIVEADAL--SWFKFSSIAWTHDSKGFFYSRYPAPKEG-K 204 (732)
Q Consensus 132 ~~~~~~~~SPD----G~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~-~ 204 (732)
..+..+.+||| +++++-.. .++.|+++.+|+.+.... .......++++|||+.+.-.....+... .
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g-------~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l 184 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSG-------NIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETIL 184 (356)
T ss_dssp EEEEEECC------CCEEEEEEE-------EEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEE
T ss_pred cceEEEEECCCccccccEEEeCC-------CeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeE
Confidence 45778889999 98888632 235566666666433211 1112344555666654332111111000 0
Q ss_pred CC----CCCCc-ccCCcccEEEEEECCCCCCCCeEEEecCCC-CeeEEEeEEecCCcEEEEEEecC-------CcceEEE
Q 004766 205 DM----DAGTE-TDSNLYHEFYYHFLGTKQSEDILCWKDPEH-PKYIFSGHVTEDGQYLVMCIEEN-------CDPVNKV 271 (732)
Q Consensus 205 ~~----~~~~~-~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~-~~~~~~~~~SpDg~~l~~~~~~~-------~~~~~~l 271 (732)
.| +++.. ........|.+|++.+++.. ..+..... .......+|||||++++..+.+. .+....+
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l--~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tI 262 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLL--KKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQL 262 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEE--EEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEE--EEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEE
Confidence 00 00000 01234567999999887532 22322111 11234568999999986544211 1123556
Q ss_pred EEEeCCCCCCCcccccccCCCCCcEEee----ecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC
Q 004766 272 YYCDLSALPEGLEGFKKRDGLLPFVKLI----DGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA 347 (732)
Q Consensus 272 ~~~d~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~ 347 (732)
.+++..++. ....+. .+....+...+.++..++ .... +..|..+|+.+++...++..+.
T Consensus 263 klWd~~tgk-------------~l~v~~~~~p~Gh~~~~lsg~~sg~~lA-SgS~---DgTIkIWDl~tGk~l~tL~gH~ 325 (356)
T 2w18_A 263 IVINPKTTL-------------SVGVMLYCLPPGQAGRFLEGDVKDHCAA-AILT---SGTIAIWDLLLGQCTALLPPVS 325 (356)
T ss_dssp EEEETTTTE-------------EEEEEEECCCTTCCCCEEEEEEETTEEE-EEET---TSCEEEEETTTCSEEEEECCC-
T ss_pred EEEECCCCE-------------EEEEEEeeccCCCcceeEccccCCCEEE-EEcC---CCcEEEEECCCCcEEEEecCCC
Confidence 667776632 011110 011001111111222222 2222 3468889999987555665554
Q ss_pred CCCceeEEEEecCCEEEEEEecCCeeEEEEEeC
Q 004766 348 ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDL 380 (732)
Q Consensus 348 ~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~ 380 (732)
+..+..+.|++++.++++...|+ .|++||.
T Consensus 326 -~~vvs~vafSPDG~~LaSGS~D~--TIklWd~ 355 (356)
T 2w18_A 326 -DQHWSFVKWSGTDSHLLAGQKDG--NIFVYHY 355 (356)
T ss_dssp --CCCCEEEECSSSSEEEEECTTS--CEEEEEE
T ss_pred -CCeEEEEEECCCCCEEEEEECCC--cEEEecC
Confidence 34455678898778888888884 6777774
No 423
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.28 E-value=0.0026 Score=68.33 Aligned_cols=229 Identities=15% Similarity=0.086 Sum_probs=133.4
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
.+..+.++ +++|+... .+ .+|++||+++++.+.... .......+.|+ ++.|+....
T Consensus 161 ~v~~~~~~--~~~l~s~~-~d----g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~-------------- 217 (445)
T 2ovr_B 161 GVWSSQMR--DNIIISGS-TD----RTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSR-------------- 217 (445)
T ss_dssp CEEEEEEE--TTEEEEEE-TT----SCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEET--------------
T ss_pred CEEEEEec--CCEEEEEe-CC----CeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeC--------------
Confidence 35566676 55555442 22 479999999998543221 11123566774 566766543
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
...|.+|++.++.. +..+.. +......+.+ ||++++....++ .+.++|+.++.
T Consensus 218 -----dg~i~~wd~~~~~~--~~~~~~--~~~~v~~~~~--~~~~l~~~~~dg-----~i~iwd~~~~~----------- 270 (445)
T 2ovr_B 218 -----DATLRVWDIETGQC--LHVLMG--HVAAVRCVQY--DGRRVVSGAYDF-----MVKVWDPETET----------- 270 (445)
T ss_dssp -----TSEEEEEESSSCCE--EEEEEC--CSSCEEEEEE--CSSCEEEEETTS-----CEEEEEGGGTE-----------
T ss_pred -----CCEEEEEECCCCcE--EEEEcC--CcccEEEEEE--CCCEEEEEcCCC-----EEEEEECCCCc-----------
Confidence 23689999876542 222322 2233444555 888887665433 37888887632
Q ss_pred CCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 292 LLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
....+. +.......+..++..++..+. ...|..+|+.++.....+..+. ..+..+.+.+ + ++++...++
T Consensus 271 --~~~~~~-~~~~~v~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~-~-~l~~~~~dg 339 (445)
T 2ovr_B 271 --CLHTLQ-GHTNRVYSLQFDGIHVVSGSL----DTSIRVWDVETGNCIHTLTGHQ--SLTSGMELKD-N-ILVSGNADS 339 (445)
T ss_dssp --EEEEEC-CCSSCEEEEEECSSEEEEEET----TSCEEEEETTTCCEEEEECCCC--SCEEEEEEET-T-EEEEEETTS
T ss_pred --EeEEec-CCCCceEEEEECCCEEEEEeC----CCeEEEEECCCCCEEEEEcCCc--ccEEEEEEeC-C-EEEEEeCCC
Confidence 122222 222223334447777765544 2358889998876444444433 4566666654 4 555666664
Q ss_pred eeEEEEEeCCCCceeeeccc---ccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 372 KYVLQIRDLKNGSLLHQLPI---EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~~l~~---~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.|.+||+.+++.+..+.. ....+..+.+ +++.++ +.+. -..+..||+.+++
T Consensus 340 --~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-s~~~---dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 340 --TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVI-TSSD---DGTVKLWDLKTGE 393 (445)
T ss_dssp --CEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEE-EEET---TSEEEEEETTTCC
T ss_pred --eEEEEECCCCcEEEEEccCCCCCCCEEEEEE--CCCEEE-EEeC---CCeEEEEECCCCc
Confidence 688999988887666664 2445666665 445443 3332 3689999998885
No 424
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.26 E-value=1.7e-05 Score=92.25 Aligned_cols=207 Identities=11% Similarity=0.008 Sum_probs=122.6
Q ss_pred EEEEeEEECCC--CcEEEEEEeccCCceEEEEEEECCCCc--eec-ccccceeeeeEEEEeC--CcEEEEEEecCCCCCC
Q 004766 132 AALIKVSVSED--AKYLAYALSYSGSDWATIKLMRIEDQI--VEA-DALSWFKFSSIAWTHD--SKGFFYSRYPAPKEGK 204 (732)
Q Consensus 132 ~~~~~~~~SPD--G~~la~~~~~~G~e~~~i~v~dl~~g~--~~~-~~~~~~~~~~~~WspD--g~~l~y~~~~~~~~~~ 204 (732)
..+..+.|||+ |++|+.+.. + ..|++||+.+++ .+. ..........++|+|+ ++.|+....+
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~-D----g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d------ 122 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSY-D----GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------ 122 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEET-T----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------
T ss_pred CceEEEEecCCCCCCEEEEEeC-C----CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC------
Confidence 44778999998 998886642 2 479999999886 221 1112223578999999 8888877533
Q ss_pred CCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec-------------CCcEEEEEEecCCcceEEE
Q 004766 205 DMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-------------DGQYLVMCIEENCDPVNKV 271 (732)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp-------------Dg~~l~~~~~~~~~~~~~l 271 (732)
..|.+|++.++.......... +...+..+.|+| ||+.++....++. |
T Consensus 123 -------------g~I~vwdl~~~~~~~~~~~~~--~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~-----I 182 (753)
T 3jro_A 123 -------------GKVSVVEFKENGTTSPIIIDA--HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL-----V 182 (753)
T ss_dssp -------------SEEEEEECCSSSCCCCEEEEC--CSSCEEEEEECCCC---------CGGGCCEEEEETTSC-----E
T ss_pred -------------CcEEEEEeecCCCcceeEeec--CCCceEEEEecCcccccccccccCCCCCEEEEEECCCe-----E
Confidence 368899987764333333332 234567889999 6888876654432 7
Q ss_pred EEEeCCCCCCCcccccccCCCCCcEEeeecccceE-EEEEec---CCeEEEEeCCCCCCceEEEEeCCCCCC--ceEecc
Q 004766 272 YYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIAND---DTVFTFLTNKDAPKYKIIRVDLKEPND--WFEVIP 345 (732)
Q Consensus 272 ~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~d---g~~l~~~s~~~~~~~~l~~~d~~~~~~--~~~l~~ 345 (732)
.++|+.++... ......+........ ..|+|+ |+.|+..+. .+.|..+|+.++.. ...+..
T Consensus 183 ~iwd~~~~~~~---------~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~----Dg~I~iwd~~~~~~~~~~~~~~ 249 (753)
T 3jro_A 183 KIWKYNSDAQT---------YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ----DRTCIIWTQDNEQGPWKKTLLK 249 (753)
T ss_dssp EEEEEETTTTE---------EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES----SSCEEEEEESSSSSCCBCCBSS
T ss_pred EEEeccCCccc---------ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec----CCEEEEecCCCCCCcceeEEec
Confidence 77777653210 001111211111112 258898 555554333 23577777766531 111111
Q ss_pred -CCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCc
Q 004766 346 -EAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGS 384 (732)
Q Consensus 346 -~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~ 384 (732)
......+..+.+++++.++++...+| .|++|++.++.
T Consensus 250 ~~~~~~~v~~l~~spdg~~l~s~s~Dg--~I~vwd~~~~~ 287 (753)
T 3jro_A 250 EEKFPDVLWRASWSLSGNVLALSGGDN--KVTLWKENLEG 287 (753)
T ss_dssp SSCCSSCCCCEEECTTTCCEEEECSSS--CEECCBCCSSS
T ss_pred cCCCCCceEEEEEcCCCCEEEEEcCCC--EEEEEecCCCC
Confidence 11234577889988777777777775 58888886443
No 425
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.25 E-value=8.3e-05 Score=77.66 Aligned_cols=80 Identities=11% Similarity=-0.010 Sum_probs=51.9
Q ss_pred EEEecCCeEEEEeCCC-C----CCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEEEEEe-cCCeeEEEEEeC
Q 004766 308 VIANDDTVFTFLTNKD-A----PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYL-SDVKYVLQIRDL 380 (732)
Q Consensus 308 ~~s~dg~~l~~~s~~~-~----~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~~~~~-~~g~~~l~~~d~ 380 (732)
.+++||+++|+..... + ....+..+|+++.+.... ++-. ....++.+++|+ ++++... .+ ..|.++|+
T Consensus 270 ~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~-i~vg--~~p~gi~~s~Dg~~l~va~~~~~--~~VsVID~ 344 (368)
T 1mda_H 270 AKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP-ISNG--HDSDAIIAAQDGASDNYANSAGT--EVLDIYDA 344 (368)
T ss_dssp EEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEEC-CEEE--EEECEEEECCSSSCEEEEEETTT--TEEEEEES
T ss_pred EEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEE-EECC--CCcceEEECCCCCEEEEEccCCC--CeEEEEEC
Confidence 4899999999865411 1 012455999988762222 2211 235678888765 4666665 33 57999999
Q ss_pred CCCceeeecccc
Q 004766 381 KNGSLLHQLPIE 392 (732)
Q Consensus 381 ~~g~~~~~l~~~ 392 (732)
++++.++.|...
T Consensus 345 ~t~kvv~~I~vg 356 (368)
T 1mda_H 345 ASDQDQSSVELD 356 (368)
T ss_dssp SSCEEEEECCCC
T ss_pred CCCcEEEEEECC
Confidence 999887788654
No 426
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.24 E-value=1.1e-06 Score=90.83 Aligned_cols=209 Identities=11% Similarity=-0.039 Sum_probs=107.0
Q ss_pred EEEEEcC--CCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCCCC
Q 004766 483 CLLYGYG--GFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 560 (732)
Q Consensus 483 ~vv~~hG--~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 560 (732)
.|+++|| +.+. ...|. .+...|. .++.|+.++.||.|...... ......+++++.+.+..++..- ...
T Consensus 91 ~l~~~hg~g~~~~--~~~~~-~l~~~L~-~~~~v~~~d~~G~g~~~~~~-----~~~~~~~~~~~a~~~~~~i~~~-~~~ 160 (319)
T 2hfk_A 91 VLVGCTGTAANGG--PHEFL-RLSTSFQ-EERDFLAVPLPGYGTGTGTG-----TALLPADLDTALDAQARAILRA-AGD 160 (319)
T ss_dssp EEEEECCCCTTCS--TTTTH-HHHHTTT-TTCCEEEECCTTCCBC---C-----BCCEESSHHHHHHHHHHHHHHH-HTT
T ss_pred cEEEeCCCCCCCc--HHHHH-HHHHhcC-CCCceEEecCCCCCCCcccc-----cCCCCCCHHHHHHHHHHHHHHh-cCC
Confidence 7899998 3332 23443 3445566 79999999999977520000 0111234444443332222210 123
Q ss_pred CcEEEEecChhHHHHHHHHhhC----CCeeeEEEEcCCccccccc-c-cC--CCCCccccccCCCCCHHHHHHHHhcCc-
Q 004766 561 RKLCIEGGSNGGLLVGACINQR----PDLFGCALAHVGVMDMLRY-H-KF--TIGHAWVSDFGCSEEEEEFYWLIKYSP- 631 (732)
Q Consensus 561 ~~i~i~G~S~GG~l~~~~~~~~----p~~f~a~v~~~p~~d~~~~-~-~~--~~~~~~~~~~g~p~~~~~~~~~~~~sp- 631 (732)
+++.++|+|+||.++..++.+. ++..+.+|+..+....... . .+ .....+....-.+.....+..+..|.-
T Consensus 161 ~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (319)
T 2hfk_A 161 APVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARF 240 (319)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHH
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHHH
Confidence 5799999999999999988875 4557777765543211000 0 00 000000000111212222222222110
Q ss_pred --ccCCCCCCCCCCCCCCCCCeEEEEeeCCCCCCCchH-HHHHHHHHHHhhcCCCCCCCCCCCEEEEEeCCCCCCCCCch
Q 004766 632 --LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH-SLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT 708 (732)
Q Consensus 632 --~~~~~~~~~~~~~~~~~~~p~Li~~g~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 708 (732)
..... .+..|+|+++| +|..+++.. ...+ ... ....+.++.++ +||......
T Consensus 241 ~~~~~~~----------~i~~Pvl~i~g-~D~~~~~~~~~~~~----~~~---------~~~~~~~~~v~-g~H~~~~~e 295 (319)
T 2hfk_A 241 LAGPRPG----------RSSAPVLLVRA-SEPLGDWQEERGDW----RAH---------WDLPHTVADVP-GDHFTMMRD 295 (319)
T ss_dssp HHSCCCC----------CCCSCEEEEEE-SSCSSCCCGGGCCC----SCC---------CSSCSEEEEES-SCTTHHHHT
T ss_pred HHhCCCC----------CcCCCEEEEEc-CCCCCCccccccch----hhc---------CCCCCEEEEeC-CCcHHHHHH
Confidence 01112 37889999999 999988765 3222 111 12346778887 599742111
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 004766 709 QKMIDEAADRYGFMAKMLG 727 (732)
Q Consensus 709 ~~~~~~~~~~~~fl~~~l~ 727 (732)
. .....+.+.+||.+...
T Consensus 296 ~-~~~~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 296 H-APAVAEAVLSWLDAIEG 313 (319)
T ss_dssp C-HHHHHHHHHHHHHHHHC
T ss_pred h-HHHHHHHHHHHHHhcCC
Confidence 1 23445567788876543
No 427
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.24 E-value=7.3e-05 Score=77.82 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=44.6
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEE--EeCCcEEEEEEec
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAW--THDSKGFFYSRYP 198 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~W--spDg~~l~y~~~~ 198 (732)
.+..+.|||||++|+.... + ..|++||+.+++.+...........++| +||++.|+....+
T Consensus 88 ~v~~~~~~~~~~~l~s~~~-d----g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 150 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASC-D----KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD 150 (368)
T ss_dssp CEEEEEECTTSSEEEEEET-T----SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETT
T ss_pred CEEEEEECcCCCEEEEEcC-C----CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCC
Confidence 4678999999999985532 2 4899999999986543333334578999 8899888776543
No 428
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.23 E-value=0.00018 Score=74.56 Aligned_cols=179 Identities=9% Similarity=0.047 Sum_probs=99.8
Q ss_pred EEEEEECCCCceecccc--cceeeeeEEEEe--CCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeE
Q 004766 159 TIKLMRIEDQIVEADAL--SWFKFSSIAWTH--DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDIL 234 (732)
Q Consensus 159 ~i~v~dl~~g~~~~~~~--~~~~~~~~~Wsp--Dg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~ 234 (732)
.+.++|+.+++.+.... .......++|+| +++.|+....+ ..|.+|++.++.. ..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d-------------------g~i~~wd~~~~~~--~~ 163 (343)
T 3lrv_A 105 QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNR-------------------GTIGFQSYEDDSQ--YI 163 (343)
T ss_dssp EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETT-------------------CCEEEEESSSSCE--EE
T ss_pred ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCC-------------------CcEEEEECCCCcE--EE
Confidence 34556666776433221 111247899999 99988876543 3588999886543 22
Q ss_pred EEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-cccceE-EEEEec
Q 004766 235 CWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDAQY-EVIAND 312 (732)
Q Consensus 235 v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~-~~~s~d 312 (732)
+..... ...+..++|+|||++|+....+ ..|.++|+.++... ...+.. ...... ..|+|+
T Consensus 164 ~~~~~~-~~~i~~~~~~pdg~~lasg~~d-----g~i~iwd~~~~~~~------------~~~~~~~h~~~v~~l~fs~~ 225 (343)
T 3lrv_A 164 VHSAKS-DVEYSSGVLHKDSLLLALYSPD-----GILDVYNLSSPDQA------------SSRFPVDEEAKIKEVKFADN 225 (343)
T ss_dssp EECCCS-SCCCCEEEECTTSCEEEEECTT-----SCEEEEESSCTTSC------------CEECCCCTTSCEEEEEECTT
T ss_pred EEecCC-CCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCCCC------------ccEEeccCCCCEEEEEEeCC
Confidence 332222 2234578999999998765433 34888898874310 122222 111112 258999
Q ss_pred CCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC-CCCcee--EEEEecCCEEEEEEec-CCeeEEEEEeCCCC
Q 004766 313 DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-ERDVLE--SATAVNLNQMIVSYLS-DVKYVLQIRDLKNG 383 (732)
Q Consensus 313 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~l~--~~~~~~~~~l~~~~~~-~g~~~l~~~d~~~g 383 (732)
|..|+..+ . . .|..+|+.++.....+.+.. ....+. .+.+++++.+++.... ++ .+.+|+.+++
T Consensus 226 g~~l~s~~-~---~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~--~i~v~~~~~~ 293 (343)
T 3lrv_A 226 GYWMVVEC-D---Q-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN--SLTIYKFDKK 293 (343)
T ss_dssp SSEEEEEE-S---S-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT--EEEEEEECTT
T ss_pred CCEEEEEe-C---C-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCC--cEEEEEEccc
Confidence 98777655 2 1 68889998765222221110 012222 4788876666666554 54 5667766433
No 429
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.23 E-value=1.2e-06 Score=93.60 Aligned_cols=113 Identities=13% Similarity=0.093 Sum_probs=77.0
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCc---EEEEEcccCCCCC----------ch--hH--------------
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGA---VFCIANIRGGGEY----------GE--EW-------------- 529 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~---~v~~~~~rG~g~~----------g~--~~-------------- 529 (732)
+..|.||++||..+... .|.. +...|.++|| .|+++|+||.|.. |. ..
T Consensus 20 ~~~ppVVLlHG~g~s~~--~w~~-la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~ 96 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGSAG--QFES-QGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLD 96 (484)
T ss_dssp -CCCCEEEECCTTCCGG--GGHH-HHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHH
T ss_pred CCCCEEEEECCCCCCHH--HHHH-HHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccc
Confidence 45678999999876542 3443 4456666899 6999999997631 00 00
Q ss_pred ---HhcccccCCccHHHHHHHHHHHHHHcCCCCCCcEEEEecChhHHHHHHHHhhCC---CeeeEEEEcCCccc
Q 004766 530 ---HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRP---DLFGCALAHVGVMD 597 (732)
Q Consensus 530 ---~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~p~~d 597 (732)
.... .......++++.+.++.++++ ...+++.++||||||+++..++.++| +.++++|+..|..+
T Consensus 97 ~v~~~~~-~~~~~~~~~dla~~L~~ll~~--lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 97 KILSKSR-ERLIDETFSRLDRVIDEALAE--SGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHHTSCH-HHHHHHHHHHHHHHHHHHHHH--HCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred ccccccc-cCchhhhHHHHHHHHHHHHHH--hCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0000 001123467777888887765 23368999999999999999999988 48899998887654
No 430
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.22 E-value=0.0023 Score=63.55 Aligned_cols=231 Identities=9% Similarity=-0.013 Sum_probs=133.9
Q ss_pred CcEEEEEEeccCCceEEEEEEECCCCceecc------cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCc
Q 004766 143 AKYLAYALSYSGSDWATIKLMRIEDQIVEAD------ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNL 216 (732)
Q Consensus 143 G~~la~~~~~~G~e~~~i~v~dl~~g~~~~~------~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~ 216 (732)
|.+|.|+. ...|+.++++++..... ........+++|+|+++.||++.. .
T Consensus 1 ~~~l~~~~------~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~------------------~ 56 (267)
T 1npe_A 1 GTHLLFAQ------TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI------------------S 56 (267)
T ss_dssp CEEEEEEE------EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET------------------T
T ss_pred CcEEEEEc------CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC------------------C
Confidence 56677764 24799999987653210 011112368999999888988742 2
Q ss_pred ccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcE
Q 004766 217 YHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFV 296 (732)
Q Consensus 217 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 296 (732)
..+|+++++.+... ..+.... .....+++++|+++.|++.... ...|+++++++.. .+
T Consensus 57 ~~~I~~~~~~g~~~--~~~~~~~--~~~p~~ia~d~~~~~lyv~d~~----~~~I~~~~~~g~~--------------~~ 114 (267)
T 1npe_A 57 EPSIGRASLHGGEP--TTIIRQD--LGSPEGIALDHLGRTIFWTDSQ----LDRIEVAKMDGTQ--------------RR 114 (267)
T ss_dssp TTEEEEEESSSCCC--EEEECTT--CCCEEEEEEETTTTEEEEEETT----TTEEEEEETTSCS--------------CE
T ss_pred CCEEEEEecCCCCc--EEEEECC--CCCccEEEEEecCCeEEEEECC----CCEEEEEEcCCCC--------------EE
Confidence 34788888865432 2333221 1234578899999888766432 3468888887521 12
Q ss_pred Eeee-ccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCee
Q 004766 297 KLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKY 373 (732)
Q Consensus 297 ~l~~-~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~ 373 (732)
.+.. +.. ..-..++|+++.||+... .....+|+++++++.. .+.+.... -....++.++++ +.||+..... .
T Consensus 115 ~~~~~~~~~P~~i~vd~~~g~lyv~~~-~~~~~~I~~~~~dg~~-~~~~~~~~-~~~P~gia~d~~~~~lyv~d~~~--~ 189 (267)
T 1npe_A 115 VLFDTGLVNPRGIVTDPVRGNLYWTDW-NRDNPKIETSHMDGTN-RRILAQDN-LGLPNGLTFDAFSSQLCWVDAGT--H 189 (267)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEEC-CSSSCEEEEEETTSCC-CEEEECTT-CSCEEEEEEETTTTEEEEEETTT--T
T ss_pred EEEECCCCCccEEEEeeCCCEEEEEEC-CCCCcEEEEEecCCCC-cEEEEECC-CCCCcEEEEcCCCCEEEEEECCC--C
Confidence 2222 111 112247887888887543 2224689999987654 34443222 234567888864 6788776554 5
Q ss_pred EEEEEeCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 374 VLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 374 ~l~~~d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+|++++++ |...+.+.........++ .+++.++++-. ....++++|..+++
T Consensus 190 ~I~~~~~~-g~~~~~~~~~~~~P~gi~--~d~~~lyva~~---~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 190 RAECLNPA-QPGRRKVLEGLQYPFAVT--SYGKNLYYTDW---KTNSVIAMDLAISK 240 (267)
T ss_dssp EEEEEETT-EEEEEEEEECCCSEEEEE--EETTEEEEEET---TTTEEEEEETTTTE
T ss_pred EEEEEecC-CCceEEEecCCCCceEEE--EeCCEEEEEEC---CCCeEEEEeCCCCC
Confidence 89999997 433222211111222343 34566766432 23578999988774
No 431
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.21 E-value=0.00082 Score=72.20 Aligned_cols=229 Identities=11% Similarity=0.080 Sum_probs=127.5
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
+..+.| ||++|+.... + .+|++||+.+++.+.... .......++|+ ++.|+....+
T Consensus 176 v~~l~~--~~~~l~sg~~-d----g~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~d-------------- 232 (435)
T 1p22_A 176 VLCLQY--DERVIITGSS-D----STVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKD-------------- 232 (435)
T ss_dssp EEEEEC--CSSEEEEEET-T----SCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETT--------------
T ss_pred EEEEEE--CCCEEEEEcC-C----CeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCC--------------
Confidence 445555 8888875532 2 479999999998543221 11124677776 3456655432
Q ss_pred cCCcccEEEEEECCCCCCCCe-EEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDI-LCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~-~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
..|.+|++.++..... ..+. .+...+..+.+ +|++|+..+.+ ..+.++|+.++.
T Consensus 233 -----g~i~vwd~~~~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~s~~~d-----g~i~vwd~~~~~----------- 287 (435)
T 1p22_A 233 -----RSIAVWDMASPTDITLRRVLV--GHRAAVNVVDF--DDKYIVSASGD-----RTIKVWNTSTCE----------- 287 (435)
T ss_dssp -----SCEEEEECSSSSCCEEEEEEC--CCSSCEEEEEE--ETTEEEEEETT-----SEEEEEETTTCC-----------
T ss_pred -----CcEEEEeCCCCCCceeeeEec--CCCCcEEEEEe--CCCEEEEEeCC-----CeEEEEECCcCc-----------
Confidence 3588889876543211 1222 22233445555 88888766543 348888987742
Q ss_pred CCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 292 LLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 292 ~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
....+. +.......+..+++.++..+. ...|..+|+.++.....+..+. ..+..+.+ . +..+++...++
T Consensus 288 --~~~~~~-~~~~~v~~~~~~~~~l~~g~~----dg~i~iwd~~~~~~~~~~~~h~--~~v~~~~~-~-~~~l~sg~~dg 356 (435)
T 1p22_A 288 --FVRTLN-GHKRGIACLQYRDRLVVSGSS----DNTIRLWDIECGACLRVLEGHE--ELVRCIRF-D-NKRIVSGAYDG 356 (435)
T ss_dssp --EEEEEE-CCSSCEEEEEEETTEEEEEET----TSCEEEEETTTCCEEEEECCCS--SCEEEEEC-C-SSEEEEEETTS
T ss_pred --EEEEEc-CCCCcEEEEEeCCCEEEEEeC----CCeEEEEECCCCCEEEEEeCCc--CcEEEEEe-c-CCEEEEEeCCC
Confidence 122222 222233334456776665443 3468889998876444444443 45777776 3 45666666664
Q ss_pred eeEEEEEeCCCCc---------eeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 372 KYVLQIRDLKNGS---------LLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 372 ~~~l~~~d~~~g~---------~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.|.+||+.+++ .+..+..+.+.+..+.+ ++..++ +.+ .-..+..+|+.++
T Consensus 357 --~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~-s~s---~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 357 --KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIV-SSS---HDDTILIWDFLND 415 (435)
T ss_dssp --CEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEE-ECC---SSSEEEEEC----
T ss_pred --cEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEE-EEe---CCCEEEEEECCCC
Confidence 68889986444 23344434455555554 555443 222 3457888887765
No 432
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.19 E-value=0.00059 Score=71.19 Aligned_cols=204 Identities=9% Similarity=-0.021 Sum_probs=114.7
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
....++++++.++++.. .+ .+|++||+.+|+.+...........+.|+++. ++.+.
T Consensus 62 ~~~~~~~~~~~~~~~~~---~d-~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~------------------ 117 (355)
T 3vu4_A 62 SKVRMLHRTNYVAFVTG---VK-EVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVSY------------------ 117 (355)
T ss_dssp CEEEECTTSSEEEEECS---ST-TEEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEEE------------------
T ss_pred EEEEEcCCCCEEEEEEC---Cc-cEEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEEE------------------
Confidence 46788999999987743 22 38999999999865422222234677887764 44432
Q ss_pred CcccEEEEEECCCC-CCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc---cC
Q 004766 215 NLYHEFYYHFLGTK-QSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK---RD 290 (732)
Q Consensus 215 ~~~~~v~~~~lgt~-~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~---~~ 290 (732)
...|++|++.+. ..-.. + .. + ....++++ .++++.+... ...|.++|+.++.... .... ..
T Consensus 118 --~~~i~i~d~~~~~~~~~~-~-~~---~--~~~~~~s~--~~la~~sg~~---~g~v~iwd~~~~~~~~-~~~~~~~~~ 182 (355)
T 3vu4_A 118 --GDVISVFKFGNPWKRITD-D-IR---F--GGVCEFSN--GLLVYSNEFN---LGQIHITKLQSSGSAT-TQDQGVQQK 182 (355)
T ss_dssp --TTEEEEEESSTTCCBSSC-C-EE---E--EEEEEEET--TEEEEEESSC---TTCEEEEECCC---------------
T ss_pred --cCEEEEEECCCCceeeEE-e-cc---C--CceEEEEc--cEEEEeCCCc---CcEEEEEECCCCCccc-ccccccccc
Confidence 125889998876 22111 1 11 1 12345666 6777653222 2347888887632000 0000 00
Q ss_pred CCCC-cEEeeecccceE-EEEEecCCeEEEEeCCCCCCce-EEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEE
Q 004766 291 GLLP-FVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYK-IIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSY 367 (732)
Q Consensus 291 ~~~~-~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~-l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~ 367 (732)
...+ ...+........ ..|+|||+.|+..+. ... |..+|+.++.....+........+..+.+++++.++++.
T Consensus 183 ~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~----d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 183 AILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQ----DGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp ----CCEEECCCSSCEEEEEECTTSSEEEEEET----TCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEE
T ss_pred ccCcccEEEEccCCceEEEEECCCCCEEEEEeC----CCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEE
Confidence 0001 222222222222 258999987775443 235 888899887744444421123578899999877778888
Q ss_pred ecCCeeEEEEEeCCCC
Q 004766 368 LSDVKYVLQIRDLKNG 383 (732)
Q Consensus 368 ~~~g~~~l~~~d~~~g 383 (732)
..+ ..|.+||+.++
T Consensus 259 s~d--~~v~iw~~~~~ 272 (355)
T 3vu4_A 259 SDK--WTLHVFEIFND 272 (355)
T ss_dssp ETT--CEEEEEESSCC
T ss_pred ECC--CEEEEEEccCC
Confidence 777 47888998654
No 433
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.16 E-value=0.00025 Score=69.99 Aligned_cols=198 Identities=13% Similarity=0.096 Sum_probs=121.8
Q ss_pred eeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEE
Q 004766 181 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 260 (732)
Q Consensus 181 ~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~ 260 (732)
.+++|+||| .||.+... .....|...++.++.....+ ..+.. .+. ..++.+|+.|+..
T Consensus 24 ~Gl~~~~dg-~Lyvstg~----------------~~~s~v~~iD~~tg~v~~~i--~l~~~-~fg--eGi~~~g~~lyv~ 81 (266)
T 2iwa_A 24 QGLVYAEND-TLFESTGL----------------YGRSSVRQVALQTGKVENIH--KMDDS-YFG--EGLTLLNEKLYQV 81 (266)
T ss_dssp EEEEECSTT-EEEEEECS----------------TTTCEEEEEETTTCCEEEEE--ECCTT-CCE--EEEEEETTEEEEE
T ss_pred ccEEEeCCC-eEEEECCC----------------CCCCEEEEEECCCCCEEEEE--ecCCC-cce--EEEEEeCCEEEEE
Confidence 679999986 56665421 12457999999887533221 11221 132 3455567787666
Q ss_pred EecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCc
Q 004766 261 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW 340 (732)
Q Consensus 261 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~ 340 (732)
... .+.++++|.++.+ ....+..+....+ .+++||+++|+ ++ + ..+|..+|.++.+..
T Consensus 82 t~~----~~~v~viD~~t~~-------------v~~~i~~g~~~g~-glt~Dg~~l~v-s~-g--s~~l~viD~~t~~v~ 139 (266)
T 2iwa_A 82 VWL----KNIGFIYDRRTLS-------------NIKNFTHQMKDGW-GLATDGKILYG-SD-G--TSILYEIDPHTFKLI 139 (266)
T ss_dssp ETT----CSEEEEEETTTTE-------------EEEEEECCSSSCC-EEEECSSSEEE-EC-S--SSEEEEECTTTCCEE
T ss_pred Eec----CCEEEEEECCCCc-------------EEEEEECCCCCeE-EEEECCCEEEE-EC-C--CCeEEEEECCCCcEE
Confidence 532 3569999988742 1222222201122 36789999885 55 2 348999999887632
Q ss_pred eEec-cCC--CCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeeccccc-------------ceeeEeecccC
Q 004766 341 FEVI-PEA--ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEI-------------GSVNAISARRE 404 (732)
Q Consensus 341 ~~l~-~~~--~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~-------------g~v~~~~~s~d 404 (732)
..+. ... +-..+..+.+.+ +.+|+..... ..|.++|+++|+.+..|.++. ....+++++++
T Consensus 140 ~~I~Vg~~~~p~~~~nele~~d-g~lyvn~~~~--~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~ 216 (266)
T 2iwa_A 140 KKHNVKYNGHRVIRLNELEYIN-GEVWANIWQT--DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQE 216 (266)
T ss_dssp EEEECEETTEECCCEEEEEEET-TEEEEEETTS--SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETT
T ss_pred EEEEECCCCcccccceeEEEEC-CEEEEecCCC--CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCC
Confidence 3322 111 112355677774 7887665443 589999999999878887631 23467888999
Q ss_pred CcEEEEEEecCCCCceEEEEECCC
Q 004766 405 DSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 405 ~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+++++++-..+ +.+|.+++..
T Consensus 217 ~~~lfVTgk~~---~~v~~i~l~~ 237 (266)
T 2iwa_A 217 NKRIFVTGKLW---PKLFEIKLHL 237 (266)
T ss_dssp TTEEEEEETTC---SEEEEEEEEE
T ss_pred CCEEEEECCCC---CeEEEEEEec
Confidence 99988876554 5788887654
No 434
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.16 E-value=5.2e-05 Score=81.77 Aligned_cols=116 Identities=8% Similarity=-0.065 Sum_probs=75.1
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCC--------ce---ecc-cccceeeeeEEEEeC-CcEEEEEEecC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQ--------IV---EAD-ALSWFKFSSIAWTHD-SKGFFYSRYPA 199 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g--------~~---~~~-~~~~~~~~~~~WspD-g~~l~y~~~~~ 199 (732)
.+..++|||||++||..... |+....|+|||+.++ +. +.. .........++|+|+ ++.|+....+
T Consensus 94 ~v~~l~~spdg~~lav~~~s-gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D- 171 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMS-SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD- 171 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEE-TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT-
T ss_pred cccEEEEcCCCCEEEEEEec-cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC-
Confidence 37789999999999875422 344579999999765 11 111 111223578999998 6666655433
Q ss_pred CCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCC
Q 004766 200 PKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS 277 (732)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 277 (732)
..|++|++.++. .+.....+...+..++|||||++|+....++ .|.++|..
T Consensus 172 ------------------g~v~iwD~~~~~----~~~~~~~~~~~v~~v~wspdg~~lasgs~dg-----~v~iwd~~ 222 (434)
T 2oit_A 172 ------------------GSIAVLQVTETV----KVCATLPSTVAVTSVCWSPKGKQLAVGKQNG-----TVVQYLPT 222 (434)
T ss_dssp ------------------SCEEEEEESSSE----EEEEEECGGGCEEEEEECTTSSCEEEEETTS-----CEEEECTT
T ss_pred ------------------CeEEEEEcCCCc----ceeeccCCCCceeEEEEcCCCCEEEEEcCCC-----cEEEEccC
Confidence 358889987652 2221111223467899999999998766433 37788876
No 435
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.15 E-value=1.1e-05 Score=83.70 Aligned_cols=102 Identities=15% Similarity=0.025 Sum_probs=68.4
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHH-HHHHHHcCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISA-SEYLISAGY 557 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~ 557 (732)
+..|.|+++||+.+.. ..|.. +...|. .++.|+.++.+|.|.. ... ..+++++.+. ++.+.+..
T Consensus 99 g~~~~l~~lhg~~~~~--~~~~~-l~~~L~-~~~~v~~~d~~g~~~~---~~~-------~~~~~~~a~~~~~~i~~~~- 163 (329)
T 3tej_A 99 GNGPTLFCFHPASGFA--WQFSV-LSRYLD-PQWSIIGIQSPRPNGP---MQT-------AANLDEVCEAHLATLLEQQ- 163 (329)
T ss_dssp CSSCEEEEECCTTSCC--GGGGG-GGGTSC-TTCEEEEECCCTTTSH---HHH-------CSSHHHHHHHHHHHHHHHC-
T ss_pred CCCCcEEEEeCCcccc--hHHHH-HHHhcC-CCCeEEEeeCCCCCCC---CCC-------CCCHHHHHHHHHHHHHHhC-
Confidence 4567899999987753 34443 234455 7899999999986541 111 1234444443 33333321
Q ss_pred CCCCcEEEEecChhHHHHHHHHhh---CCCeeeEEEEcCCcc
Q 004766 558 TQSRKLCIEGGSNGGLLVGACINQ---RPDLFGCALAHVGVM 596 (732)
Q Consensus 558 ~d~~~i~i~G~S~GG~l~~~~~~~---~p~~f~a~v~~~p~~ 596 (732)
..+++.++|||+||.++..++.+ +|+....+|+..+..
T Consensus 164 -~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~ 204 (329)
T 3tej_A 164 -PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWP 204 (329)
T ss_dssp -SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCC
T ss_pred -CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCC
Confidence 12579999999999999999988 999999888766543
No 436
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.14 E-value=0.00061 Score=68.89 Aligned_cols=192 Identities=11% Similarity=0.098 Sum_probs=113.1
Q ss_pred eeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEE
Q 004766 181 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 260 (732)
Q Consensus 181 ~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~ 260 (732)
.+++|+|||+.|+++.. ....|++++..++ ...+..+. .....++++|||+.++ .
T Consensus 31 eg~~~d~~g~~l~~~~~------------------~~~~i~~~~~~~~----~~~~~~~~--~~~~~l~~~~dg~l~v-~ 85 (296)
T 3e5z_A 31 EGPVYVPARSAVIFSDV------------------RQNRTWAWSDDGQ----LSPEMHPS--HHQNGHCLNKQGHLIA-C 85 (296)
T ss_dssp EEEEEEGGGTEEEEEEG------------------GGTEEEEEETTSC----EEEEESSC--SSEEEEEECTTCCEEE-E
T ss_pred cCCeEeCCCCEEEEEeC------------------CCCEEEEEECCCC----eEEEECCC--CCcceeeECCCCcEEE-E
Confidence 67999999998888742 3347999998765 23343332 2356789999999543 3
Q ss_pred EecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeeccc------ceEEEEEecCCeEEEEeC-------------
Q 004766 261 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD------AQYEVIANDDTVFTFLTN------------- 321 (732)
Q Consensus 261 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~s~dg~~l~~~s~------------- 321 (732)
. .. ...|++++..++. ...+..... .....++++|+ +|+...
T Consensus 86 ~-~~---~~~i~~~d~~~g~--------------~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~ 146 (296)
T 3e5z_A 86 S-HG---LRRLERQREPGGE--------------WESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGG 146 (296)
T ss_dssp E-TT---TTEEEEECSTTCC--------------EEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCC
T ss_pred e-cC---CCeEEEEcCCCCc--------------EEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccc
Confidence 2 21 2458889986543 222221110 01124788875 665321
Q ss_pred -CCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCC-CCce---eeeccccccee
Q 004766 322 -KDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLK-NGSL---LHQLPIEIGSV 396 (732)
Q Consensus 322 -~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~-~g~~---~~~l~~~~g~v 396 (732)
.......|++++.. +. ...+.... ....++.+++++.+++....+ ..|++++++ +|+. .+.+....+.+
T Consensus 147 ~~~~~~~~l~~~~~~-g~-~~~~~~~~--~~~~gi~~s~dg~~lv~~~~~--~~i~~~~~~~~g~~~~~~~~~~~~~~~p 220 (296)
T 3e5z_A 147 EMELPGRWVFRLAPD-GT-LSAPIRDR--VKPNGLAFLPSGNLLVSDTGD--NATHRYCLNARGETEYQGVHFTVEPGKT 220 (296)
T ss_dssp CCCSSSCEEEEECTT-SC-EEEEECCC--SSEEEEEECTTSCEEEEETTT--TEEEEEEECSSSCEEEEEEEECCSSSCC
T ss_pred cccCCCcEEEEECCC-CC-EEEeecCC--CCCccEEECCCCCEEEEeCCC--CeEEEEEECCCCcCcCCCeEeeCCCCCC
Confidence 01123589999877 43 34443332 445778888866655544433 578999885 4543 12222223344
Q ss_pred eEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 397 NAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 397 ~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
..+..+++|+ ++++. ...++++|+.+
T Consensus 221 ~~i~~d~~G~-l~v~~-----~~~v~~~~~~g 246 (296)
T 3e5z_A 221 DGLRVDAGGL-IWASA-----GDGVHVLTPDG 246 (296)
T ss_dssp CSEEEBTTSC-EEEEE-----TTEEEEECTTS
T ss_pred CeEEECCCCC-EEEEc-----CCeEEEECCCC
Confidence 5567778886 66554 46899999863
No 437
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.14 E-value=0.0022 Score=65.17 Aligned_cols=237 Identities=9% Similarity=0.008 Sum_probs=122.8
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
..++.|+|||+ +|..+..+. .|+.+|.+++......... ...++++++||+ |+++....
T Consensus 34 pegia~~~~g~--lyv~d~~~~---~I~~~d~~g~~~~~~~~~~-~p~gia~~~dG~-l~vad~~~-------------- 92 (306)
T 2p4o_A 34 LENLASAPDGT--IFVTNHEVG---EIVSITPDGNQQIHATVEG-KVSGLAFTSNGD-LVATGWNA-------------- 92 (306)
T ss_dssp EEEEEECTTSC--EEEEETTTT---EEEEECTTCCEEEEEECSS-EEEEEEECTTSC-EEEEEECT--------------
T ss_pred cceEEECCCCC--EEEEeCCCC---eEEEECCCCceEEEEeCCC-CceeEEEcCCCc-EEEEeccC--------------
Confidence 45789999998 455554332 6889998765422111222 347899999998 55543211
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 293 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 293 (732)
...+|++++..++.. ..+...+. ..+..+++..+++. +++. ... ...||.+|..++........ ....
T Consensus 93 --~~~~v~~~d~~~g~~--~~~~~~~~-~~~~~g~~~~~~~~-~~v~-d~~---~g~i~~~d~~~~~~~v~~~~--~~~~ 160 (306)
T 2p4o_A 93 --DSIPVVSLVKSDGTV--ETLLTLPD-AIFLNGITPLSDTQ-YLTA-DSY---RGAIWLIDVVQPSGSIWLEH--PMLA 160 (306)
T ss_dssp --TSCEEEEEECTTSCE--EEEEECTT-CSCEEEEEESSSSE-EEEE-ETT---TTEEEEEETTTTEEEEEEEC--GGGS
T ss_pred --CcceEEEEcCCCCeE--EEEEeCCC-ccccCcccccCCCc-EEEE-ECC---CCeEEEEeCCCCcEeEEEEC--Cccc
Confidence 123577776555432 22333222 22334555555554 3333 221 24689998764210000000 0000
Q ss_pred CcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCC-CC--CceEeccCCCCCceeEEEEecCCEEEEEEecC
Q 004766 294 PFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE-PN--DWFEVIPEAERDVLESATAVNLNQMIVSYLSD 370 (732)
Q Consensus 294 ~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~-~~--~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~ 370 (732)
.......... ..-+++||+.||+.... +.+|+++++++ +. ..+ ++... ....++.+.+++.+++....+
T Consensus 161 -~~~~~~~~~~-pngis~dg~~lyv~d~~---~~~I~~~~~~~~g~~~~~~-~~~~~--~~P~gi~vd~dG~l~va~~~~ 232 (306)
T 2p4o_A 161 -RSNSESVFPA-ANGLKRFGNFLYVSNTE---KMLLLRIPVDSTDKPGEPE-IFVEQ--TNIDDFAFDVEGNLYGATHIY 232 (306)
T ss_dssp -CSSTTCCSCS-EEEEEEETTEEEEEETT---TTEEEEEEBCTTSCBCCCE-EEEES--CCCSSEEEBTTCCEEEECBTT
T ss_pred -cccccCCCCc-CCCcCcCCCEEEEEeCC---CCEEEEEEeCCCCCCCccE-EEecc--CCCCCeEECCCCCEEEEeCCC
Confidence 0000011111 11248899888865432 45799999875 32 112 22211 223567777767787765544
Q ss_pred CeeEEEEEeCCCCceee--ecccccceeeEeecc---cCCcEEEEEEec
Q 004766 371 VKYVLQIRDLKNGSLLH--QLPIEIGSVNAISAR---REDSVVFISFTS 414 (732)
Q Consensus 371 g~~~l~~~d~~~g~~~~--~l~~~~g~v~~~~~s---~d~~~l~~~~ss 414 (732)
.+|.+++.+ |+... .+..+......+.+. +|+++||++.+.
T Consensus 233 --~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 233 --NSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp --CCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred --CeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 578999986 76522 344442334566666 788888887654
No 438
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.08 E-value=0.001 Score=67.31 Aligned_cols=194 Identities=12% Similarity=0.046 Sum_probs=115.7
Q ss_pred eeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEE
Q 004766 181 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 260 (732)
Q Consensus 181 ~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~ 260 (732)
.++.|+|+++.|+++.. ...+|++++..++.. ..+..+ .....++++|||+.+ +.
T Consensus 16 Egp~w~~~~~~l~~~d~------------------~~~~i~~~d~~~~~~---~~~~~~---~~~~~i~~~~dG~l~-v~ 70 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDI------------------PAKKVCRWDSFTKQV---QRVTMD---APVSSVALRQSGGYV-AT 70 (297)
T ss_dssp EEEEEETTTTEEEEEET------------------TTTEEEEEETTTCCE---EEEECS---SCEEEEEEBTTSSEE-EE
T ss_pred cCCeEECCCCEEEEEEC------------------CCCEEEEEECCCCcE---EEEeCC---CceEEEEECCCCCEE-EE
Confidence 57999999889998742 345799999876532 334332 234578999999943 33
Q ss_pred EecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc---c-c--eEEEEEecCCeEEEEeCCC--------CCC
Q 004766 261 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF---D-A--QYEVIANDDTVFTFLTNKD--------APK 326 (732)
Q Consensus 261 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~---~-~--~~~~~s~dg~~l~~~s~~~--------~~~ 326 (732)
. . ..|+++|.+++. ++.+.... . . .-..++++|+ ||+.+... ...
T Consensus 71 ~-~-----~~l~~~d~~~g~--------------~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~ 129 (297)
T 3g4e_A 71 I-G-----TKFCALNWKEQS--------------AVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQ 129 (297)
T ss_dssp E-T-----TEEEEEETTTTE--------------EEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTC
T ss_pred E-C-----CeEEEEECCCCc--------------EEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCC
Confidence 2 1 358889987642 22222110 0 0 1124778876 67655321 234
Q ss_pred ceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEEEEEecCCeeEEEEEeC--CCCcee--eec-ccc--cceeeE
Q 004766 327 YKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDL--KNGSLL--HQL-PIE--IGSVNA 398 (732)
Q Consensus 327 ~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~~~~~~~g~~~l~~~d~--~~g~~~--~~l-~~~--~g~v~~ 398 (732)
..|++++.++ . ...+.... ....++.+++++ .+|+..... .+|+++++ ++|... +.+ .++ .+....
T Consensus 130 ~~l~~~d~~g-~-~~~~~~~~--~~pngi~~spdg~~lyv~~~~~--~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g 203 (297)
T 3g4e_A 130 GALYSLFPDH-H-VKKYFDQV--DISNGLDWSLDHKIFYYIDSLS--YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDG 203 (297)
T ss_dssp EEEEEECTTS-C-EEEEEEEE--SBEEEEEECTTSCEEEEEEGGG--TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEE
T ss_pred cEEEEEECCC-C-EEEEeecc--ccccceEEcCCCCEEEEecCCC--CcEEEEeccCCCCcccCcEEEEECCCCCCCCCe
Confidence 6899998753 3 33333322 335678888764 576666544 47888876 456431 111 122 345567
Q ss_pred eecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 399 ISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 399 ~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+..+++|+ ++++... ...++++|+.+++
T Consensus 204 ~~~d~~G~-lwva~~~---~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 204 MCIDAEGK-LWVACYN---GGRVIRLDPVTGK 231 (297)
T ss_dssp EEEBTTSC-EEEEEET---TTEEEEECTTTCC
T ss_pred eEECCCCC-EEEEEcC---CCEEEEEcCCCce
Confidence 77788885 6665433 2579999998775
No 439
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.06 E-value=0.00086 Score=67.18 Aligned_cols=218 Identities=9% Similarity=0.058 Sum_probs=120.9
Q ss_pred eEEEEEEECCCCceeccc-ccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeE
Q 004766 157 WATIKLMRIEDQIVEADA-LSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDIL 234 (732)
Q Consensus 157 ~~~i~v~dl~~g~~~~~~-~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~ 234 (732)
...|+++|.++|+.+-.. ... ....++.++|||+.|+ + .+ ..|+.++. +++ +
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s-~~-------------------~~V~~~d~-~G~----~ 67 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-S-YS-------------------KGAKMITR-DGR----E 67 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-E-CB-------------------SEEEEECT-TSC----E
T ss_pred CCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-e-CC-------------------CCEEEECC-CCC----E
Confidence 358999999999865221 111 1236788999998555 3 21 24666665 332 3
Q ss_pred EEecCCC-CeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-c----c-cceEE
Q 004766 235 CWKDPEH-PKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-G----F-DAQYE 307 (732)
Q Consensus 235 v~~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~----~-~~~~~ 307 (732)
+++.... .....++.+++||+.++..... ...++.++.++.. .++.-.. . . .....
T Consensus 68 ~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~-------------l~~~~~~~~~~~~~~~~~~v 130 (276)
T 3no2_A 68 LWNIAAPAGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEV-------------LSKTEFETGIERPHAQFRQI 130 (276)
T ss_dssp EEEEECCTTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCE-------------EEEEEECCSCSSGGGSCSCC
T ss_pred EEEEcCCCCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCE-------------EEEEeccCCCCcccccccCc
Confidence 3332211 1234577899999998754421 2467777764421 0111000 0 0 00111
Q ss_pred EEEecCCeEEEEeCCCCCCceEEEEeCCCCC-CceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCcee
Q 004766 308 VIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLL 386 (732)
Q Consensus 308 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~ 386 (732)
...++|+.++... .+.+|+.+|.+ ++ .|+.-.+ .. ..++...+++.+++....+ .+|+.+|+++|+.+
T Consensus 131 ~~~~~G~~lv~~~----~~~~v~~~d~~-G~~~w~~~~~---~~-~~~~~~~~~g~~~v~~~~~--~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 131 NKNKKGNYLVPLF----ATSEVREIAPN-GQLLNSVKLS---GT-PFSSAFLDNGDCLVACGDA--HCFVQLNLESNRIV 199 (276)
T ss_dssp EECTTSCEEEEET----TTTEEEEECTT-SCEEEEEECS---SC-CCEEEECTTSCEEEECBTT--SEEEEECTTTCCEE
T ss_pred eECCCCCEEEEec----CCCEEEEECCC-CCEEEEEECC---CC-ccceeEcCCCCEEEEeCCC--CeEEEEeCcCCcEE
Confidence 3567887665332 24579999988 54 2332211 12 2234445556677766555 47999999889876
Q ss_pred eecccc--c----ceeeEeecccCCcEEEEEEecCC------CCceEEEEECCCC
Q 004766 387 HQLPIE--I----GSVNAISARREDSVVFISFTSFL------IPGIVYQCNLKTE 429 (732)
Q Consensus 387 ~~l~~~--~----g~v~~~~~s~d~~~l~~~~ss~~------~p~~~y~~d~~~~ 429 (732)
.++... . ..+..+...++|+.++..+.+-. ...+++.++. +|
T Consensus 200 w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~-~g 253 (276)
T 3no2_A 200 RRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS-EG 253 (276)
T ss_dssp EEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECT-TS
T ss_pred EEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECC-CC
Confidence 666421 1 12445556678876665554432 3567888876 44
No 440
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.05 E-value=0.0012 Score=65.39 Aligned_cols=236 Identities=9% Similarity=0.058 Sum_probs=125.3
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
..++.++|||+ |.++.+..+ ..|+++|..++......... ....++++++||+ |+++..
T Consensus 26 p~~i~~~~~g~-l~v~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~--------------- 85 (270)
T 1rwi_B 26 PSGVAVDSAGN-VYVTSEGMY---GRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF--------------- 85 (270)
T ss_dssp EEEEEECTTCC-EEEEECSSS---CEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET---------------
T ss_pred ccceEECCCCC-EEEEccCCC---CcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC---------------
Confidence 45788999998 433143222 37888887765532211111 1236789999987 665531
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
...|++++..+... ..+... ......+++++++|+ |++... . ...|++++..+..
T Consensus 86 ----~~~i~~~d~~~~~~---~~~~~~-~~~~p~~i~~~~~g~-l~v~~~-~---~~~i~~~~~~~~~------------ 140 (270)
T 1rwi_B 86 ----NNRVVTLAAGSNNQ---TVLPFD-GLNYPEGLAVDTQGA-VYVADR-G---NNRVVKLAAGSKT------------ 140 (270)
T ss_dssp ----TTEEEEECTTCSCC---EECCCC-SCSSEEEEEECTTCC-EEEEEG-G---GTEEEEECTTCCS------------
T ss_pred ----CCEEEEEeCCCceE---eeeecC-CcCCCcceEECCCCC-EEEEEC-C---CCEEEEEECCCce------------
Confidence 33688888765422 112111 112345788999998 443322 2 2457777654421
Q ss_pred CCcEEeeecc-cceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 293 LPFVKLIDGF-DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 293 ~~~~~l~~~~-~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
......... ...-..++++|+ +|+.... ...|++++.++.. .. ...........++.+.+++.+++....+
T Consensus 141 -~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~---~~~i~~~~~~~~~-~~-~~~~~~~~~p~~i~~d~~g~l~v~~~~~- 212 (270)
T 1rwi_B 141 -QTVLPFTGLNDPDGVAVDNSGN-VYVTDTD---NNRVVKLEAESNN-QV-VLPFTDITAPWGIAVDEAGTVYVTEHNT- 212 (270)
T ss_dssp -CEECCCCSCCSCCCEEECTTCC-EEEEEGG---GTEEEEECTTTCC-EE-ECCCSSCCSEEEEEECTTCCEEEEETTT-
T ss_pred -eEeeccccCCCceeEEEeCCCC-EEEEECC---CCEEEEEecCCCc-eE-eecccCCCCceEEEECCCCCEEEEECCC-
Confidence 000001111 111124677775 6654432 3479999987765 22 2222212446678888766788776544
Q ss_pred eeEEEEEeCCCCceeeecccc-cceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 372 KYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
..|++++.+ +.....+... ...+..+..++++. ++++-.. -.++..+++..
T Consensus 213 -~~v~~~~~~-~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~---~~~v~~~~~~~ 264 (270)
T 1rwi_B 213 -NQVVKLLAG-STTSTVLPFTGLNTPLAVAVDSDRT-VYVADRG---NDRVVKLTSLE 264 (270)
T ss_dssp -SCEEEECTT-CSCCEECCCCSCSCEEEEEECTTCC-EEEEEGG---GTEEEEECCCG
T ss_pred -CcEEEEcCC-CCcceeeccCCCCCceeEEECCCCC-EEEEECC---CCEEEEEcCCC
Confidence 468899986 4332333222 23455677778875 6655332 34677776543
No 441
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.05 E-value=0.014 Score=59.54 Aligned_cols=222 Identities=10% Similarity=0.045 Sum_probs=128.8
Q ss_pred EEEEEEECCCCc-eecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEE
Q 004766 158 ATIKLMRIEDQI-VEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILC 235 (732)
Q Consensus 158 ~~i~v~dl~~g~-~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v 235 (732)
..|+.+|++++. .......+ .....+.|.+.+..||++-. ...+|++.++.+......++
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~------------------~~~~I~r~~~~g~~~~~~~~ 74 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV------------------SEEAIKRTEFNKTESVQNVV 74 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEET------------------TTTEEEEEETTSSSCCCEEE
T ss_pred CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEEC------------------CCCcEEEEEccCCCceEEEE
Confidence 689999998764 11111111 12367899998888988732 23478999887653222233
Q ss_pred EecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEee-ecccceE-EEEEecC
Q 004766 236 WKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFDAQY-EVIANDD 313 (732)
Q Consensus 236 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~-~~~s~dg 313 (732)
...-..+ .++++.+.+..|++.... ...|.++++++.. .+.+. ....... ..+.|.+
T Consensus 75 ~~~l~~p---~glavd~~~g~ly~~d~~----~~~I~~~~~dG~~--------------~~~l~~~~~~~P~giavdp~~ 133 (318)
T 3sov_A 75 VSGLLSP---DGLACDWLGEKLYWTDSE----TNRIEVSNLDGSL--------------RKVLFWQELDQPRAIALDPSS 133 (318)
T ss_dssp EECCSCC---CEEEEETTTTEEEEEETT----TTEEEEEETTSCS--------------CEEEECSSCSSEEEEEEEGGG
T ss_pred cCCCCCc---cEEEEEcCCCeEEEEECC----CCEEEEEECCCCc--------------EEEEEeCCCCCccEEEEeCCC
Confidence 3221222 367888888888776432 3568888987632 22232 2221111 2467777
Q ss_pred CeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCEEEEEEecCCeeEEEEEeCCCCceeeeccc-
Q 004766 314 TVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI- 391 (732)
Q Consensus 314 ~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~- 391 (732)
..||+.- .+ ...+|+++++++.. .+.++... -..-.++.+++ ++.||++-... .+|++++++ |...+.+..
T Consensus 134 g~ly~td-~~-~~~~I~r~~~dG~~-~~~~~~~~-l~~Pnglavd~~~~~lY~aD~~~--~~I~~~d~d-G~~~~~~~~~ 206 (318)
T 3sov_A 134 GFMYWTD-WG-EVPKIERAGMDGSS-RFIIINSE-IYWPNGLTLDYEEQKLYWADAKL--NFIHKSNLD-GTNRQAVVKG 206 (318)
T ss_dssp TEEEEEE-CS-SSCEEEEEETTSCS-CEEEECSS-CSCEEEEEEETTTTEEEEEETTT--TEEEEEETT-SCSCEEEECS
T ss_pred CEEEEEe-cC-CCCEEEEEEcCCCC-eEEEEECC-CCCccEEEEeccCCEEEEEECCC--CEEEEEcCC-CCceEEEecC
Confidence 7777643 22 24689999988754 34454432 23456788885 47888876544 689999997 544333321
Q ss_pred ccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 392 EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 392 ~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
......+++. +++.++++ . .....+++++..+|+
T Consensus 207 ~~~~P~glav--~~~~lywt--d-~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 207 SLPHPFALTL--FEDILYWT--D-WSTHSILACNKYTGE 240 (318)
T ss_dssp CCSCEEEEEE--ETTEEEEE--E-TTTTEEEEEETTTCC
T ss_pred CCCCceEEEE--eCCEEEEE--e-cCCCeEEEEECCCCC
Confidence 1222233443 34556655 2 234678888887665
No 442
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.01 E-value=0.00098 Score=65.75 Aligned_cols=193 Identities=12% Similarity=0.009 Sum_probs=109.6
Q ss_pred EeEEECCCCcEEEEEEe-ccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 135 IKVSVSEDAKYLAYALS-YSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~-~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
.++.++||| + +|..+ ..|. ..|+++|+++|+.+....-+........+++|+.||.+.
T Consensus 24 ~Gl~~~~dg-~-Lyvstg~~~~--s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t----------------- 82 (266)
T 2iwa_A 24 QGLVYAEND-T-LFESTGLYGR--SSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVV----------------- 82 (266)
T ss_dssp EEEEECSTT-E-EEEEECSTTT--CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE-----------------
T ss_pred ccEEEeCCC-e-EEEECCCCCC--CEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEE-----------------
Confidence 578899996 4 44443 2222 489999999999664321111112233455677888774
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 293 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 293 (732)
+....++.++..+...... +..+ .+ .+..+++||++|+.+ + + .+.|+++|.++.+
T Consensus 83 -~~~~~v~viD~~t~~v~~~--i~~g-~~---~g~glt~Dg~~l~vs-~-g---s~~l~viD~~t~~------------- 137 (266)
T 2iwa_A 83 -WLKNIGFIYDRRTLSNIKN--FTHQ-MK---DGWGLATDGKILYGS-D-G---TSILYEIDPHTFK------------- 137 (266)
T ss_dssp -TTCSEEEEEETTTTEEEEE--EECC-SS---SCCEEEECSSSEEEE-C-S---SSEEEEECTTTCC-------------
T ss_pred -ecCCEEEEEECCCCcEEEE--EECC-CC---CeEEEEECCCEEEEE-C-C---CCeEEEEECCCCc-------------
Confidence 3445789999876532211 1111 01 134578899998754 2 3 3579999988732
Q ss_pred CcEEeeecccc-------eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEec-cC----------CCCCceeEE
Q 004766 294 PFVKLIDGFDA-------QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVI-PE----------AERDVLESA 355 (732)
Q Consensus 294 ~~~~l~~~~~~-------~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~-~~----------~~~~~l~~~ 355 (732)
....+..+... .. .+. +| ++|. .+.. ...|.++|+++++....+- +. .....+.++
T Consensus 138 v~~~I~Vg~~~~p~~~~nel-e~~-dg-~lyv-n~~~--~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGI 211 (266)
T 2iwa_A 138 LIKKHNVKYNGHRVIRLNEL-EYI-NG-EVWA-NIWQ--TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGI 211 (266)
T ss_dssp EEEEEECEETTEECCCEEEE-EEE-TT-EEEE-EETT--SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEE
T ss_pred EEEEEEECCCCcccccceeE-EEE-CC-EEEE-ecCC--CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEE
Confidence 12222211110 11 233 55 6664 3332 3479999999987222221 11 112467899
Q ss_pred EEecC-CEEEEEEecCCeeEEEEEeCC
Q 004766 356 TAVNL-NQMIVSYLSDVKYVLQIRDLK 381 (732)
Q Consensus 356 ~~~~~-~~l~~~~~~~g~~~l~~~d~~ 381 (732)
.+.++ +++|++.... ++|+++++.
T Consensus 212 a~~~~~~~lfVTgk~~--~~v~~i~l~ 236 (266)
T 2iwa_A 212 AWDQENKRIFVTGKLW--PKLFEIKLH 236 (266)
T ss_dssp EEETTTTEEEEEETTC--SEEEEEEEE
T ss_pred EEcCCCCEEEEECCCC--CeEEEEEEe
Confidence 99975 5677776544 578887765
No 443
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.97 E-value=0.0074 Score=63.55 Aligned_cols=206 Identities=8% Similarity=-0.045 Sum_probs=125.5
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
..++.|++.+++|.++ +..+ ..|+.++++++........+ ....++++.+.+..||++-.
T Consensus 118 ~~gl~~d~~~~~ly~~-D~~~---~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~--------------- 178 (386)
T 3v65_B 118 AIALDFHHRRELVFWS-DVTL---DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS--------------- 178 (386)
T ss_dssp EEEEEEETTTTEEEEE-ETTT---TEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEET---------------
T ss_pred cEEEEEecCCCeEEEE-eCCC---CcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcC---------------
Confidence 4578899988877655 4333 27899999877532211111 12367888888888888732
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
...+|++.++.+.. ...+.... .....+++++|++.+|++..... ...|+.+++++..
T Consensus 179 ---~~~~I~~~~~dg~~--~~~l~~~~--l~~P~giavdp~~g~ly~td~~~---~~~I~r~~~dG~~------------ 236 (386)
T 3v65_B 179 ---GTSRIEVANLDGAH--RKVLLWQS--LEKPRAIALHPMEGTIYWTDWGN---TPRIEASSMDGSG------------ 236 (386)
T ss_dssp ---TTTEEEECBTTSCS--CEEEECSS--CSCEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCS------------
T ss_pred ---CCCeEEEEeCCCCc--eEEeecCC--CCCCcEEEEEcCCCeEEEeccCC---CCEEEEEeCCCCC------------
Confidence 23468877776432 22333222 12335788999999988765432 3679999987631
Q ss_pred CCcEEeee-ccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecC
Q 004766 293 LPFVKLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSD 370 (732)
Q Consensus 293 ~~~~~l~~-~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~ 370 (732)
.+.+.. +.. ..-..+++++++||+.-. ...+|+++++++.. .+.++... .....++.+.. +.+|++...+
T Consensus 237 --~~~~~~~~~~~PnGlavd~~~~~lY~aD~---~~~~I~~~d~dG~~-~~~~~~~~-~~~P~giav~~-~~ly~td~~~ 308 (386)
T 3v65_B 237 --RRIIADTHLFWPNGLTIDYAGRRMYWVDA---KHHVIERANLDGSH-RKAVISQG-LPHPFAITVFE-DSLYWTDWHT 308 (386)
T ss_dssp --CEEEECSSCSCEEEEEEEGGGTEEEEEET---TTTEEEEECTTSCS-CEEEECSS-CSSEEEEEEET-TEEEEEETTT
T ss_pred --cEEEEECCCCCeeeEEEeCCCCEEEEEEC---CCCEEEEEeCCCCe-eEEEEECC-CCCceEEEEEC-CEEEEeeCCC
Confidence 223322 221 112258888889987533 34589999988654 34454433 23445677755 7888876544
Q ss_pred CeeEEEEEeCCCCceeeecc
Q 004766 371 VKYVLQIRDLKNGSLLHQLP 390 (732)
Q Consensus 371 g~~~l~~~d~~~g~~~~~l~ 390 (732)
.+|.+++..+|+..+.|.
T Consensus 309 --~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 309 --KSINSANKFTGKNQEIIR 326 (386)
T ss_dssp --TEEEEEETTTCCSCEEEE
T ss_pred --CeEEEEECCCCcceEEEc
Confidence 578888865676645554
No 444
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.97 E-value=0.0075 Score=63.54 Aligned_cols=220 Identities=10% Similarity=-0.050 Sum_probs=126.2
Q ss_pred EEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEec
Q 004766 159 TIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKD 238 (732)
Q Consensus 159 ~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~ 238 (732)
.|+.+++.++.............+++|.+++..||++-. ...+|+++++.+...+ .+...
T Consensus 97 ~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~------------------~~~~I~r~~~~g~~~~--~~~~~ 156 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV------------------TLDRILRANLNGSNVE--EVVST 156 (386)
T ss_dssp CEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEET------------------TTTEEEEEETTSCCEE--EEECS
T ss_pred cceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeC------------------CCCcEEEEecCCCCcE--EEEeC
Confidence 688889887663221111112478999998888988732 2347899988754322 23221
Q ss_pred CCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-cccce-EEEEEecCCeE
Q 004766 239 PEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDAQ-YEVIANDDTVF 316 (732)
Q Consensus 239 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~-~~~~s~dg~~l 316 (732)
.. ....++++++.+..|++.... ...|+++++++.. .+.+.. +.... -..+.|.++.|
T Consensus 157 ~~--~~p~glavd~~~g~lY~~d~~----~~~I~~~~~dg~~--------------~~~l~~~~l~~P~giavdp~~g~l 216 (386)
T 3v65_B 157 GL--ESPGGLAVDWVHDKLYWTDSG----TSRIEVANLDGAH--------------RKVLLWQSLEKPRAIALHPMEGTI 216 (386)
T ss_dssp SC--SCCCCEEEETTTTEEEEEETT----TTEEEECBTTSCS--------------CEEEECSSCSCEEEEEEETTTTEE
T ss_pred CC--CCccEEEEEeCCCeEEEEcCC----CCeEEEEeCCCCc--------------eEEeecCCCCCCcEEEEEcCCCeE
Confidence 11 112367888888888776432 2468888887631 222322 21111 12467777888
Q ss_pred EEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCEEEEEEecCCeeEEEEEeCCCCceeeecc-cccc
Q 004766 317 TFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP-IEIG 394 (732)
Q Consensus 317 ~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~-~~~g 394 (732)
|+.- .+. ..+|+++++++.. .+.++... -..-.++.+++ ++.||++.... .+|++++++ |...+.+. ....
T Consensus 217 y~td-~~~-~~~I~r~~~dG~~-~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~~--~~I~~~d~d-G~~~~~~~~~~~~ 289 (386)
T 3v65_B 217 YWTD-WGN-TPRIEASSMDGSG-RRIIADTH-LFWPNGLTIDYAGRRMYWVDAKH--HVIERANLD-GSHRKAVISQGLP 289 (386)
T ss_dssp EEEE-CSS-SCEEEEEETTSCS-CEEEECSS-CSCEEEEEEEGGGTEEEEEETTT--TEEEEECTT-SCSCEEEECSSCS
T ss_pred EEec-cCC-CCEEEEEeCCCCC-cEEEEECC-CCCeeeEEEeCCCCEEEEEECCC--CEEEEEeCC-CCeeEEEEECCCC
Confidence 7653 322 3689999988765 34454432 23456788884 47888876544 589999987 54323332 1222
Q ss_pred eeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 395 SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 395 ~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
...+++. +++.+|++- + .-..|.+++..+|+
T Consensus 290 ~P~giav--~~~~ly~td--~-~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 290 HPFAITV--FEDSLYWTD--W-HTKSINSANKFTGK 320 (386)
T ss_dssp SEEEEEE--ETTEEEEEE--T-TTTEEEEEETTTCC
T ss_pred CceEEEE--ECCEEEEee--C-CCCeEEEEECCCCc
Confidence 2334444 344565542 2 33577888865554
No 445
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.95 E-value=0.0098 Score=61.66 Aligned_cols=220 Identities=10% Similarity=-0.045 Sum_probs=125.6
Q ss_pred EEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEec
Q 004766 159 TIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKD 238 (732)
Q Consensus 159 ~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~ 238 (732)
.|+.+++++..............+++|.+.+..||++-. ...+|+++++.+...+ .+...
T Consensus 54 ~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~------------------~~~~I~r~~~~g~~~~--~~~~~ 113 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV------------------TLDRILRANLNGSNVE--EVVST 113 (349)
T ss_dssp CEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEET------------------TTTEEEEEETTSCSCE--EEECS
T ss_pred ceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEec------------------cCCceEEEecCCCCce--EEEeC
Confidence 588888877653221111112478999998888988732 2347899988765322 23322
Q ss_pred CCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-cccce-EEEEEecCCeE
Q 004766 239 PEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDAQ-YEVIANDDTVF 316 (732)
Q Consensus 239 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~-~~~~s~dg~~l 316 (732)
.. ....++++.+.++.|++.... ...|+++++++.. .+.+.. +.... -..+.|.++.|
T Consensus 114 ~~--~~p~glavd~~~g~ly~~d~~----~~~I~~~~~dG~~--------------~~~l~~~~l~~P~~iavdp~~g~l 173 (349)
T 3v64_C 114 GL--ESPGGLAVDWVHDKLYWTDSG----TSRIEVANLDGAH--------------RKVLLWQSLEKPRAIALHPMEGTI 173 (349)
T ss_dssp SC--SCCCEEEEETTTTEEEEEETT----TTEEEEEETTSCS--------------CEEEECTTCSCEEEEEEETTTTEE
T ss_pred CC--CCccEEEEecCCCeEEEEcCC----CCeEEEEcCCCCc--------------eEEEEeCCCCCcceEEEecCcCeE
Confidence 11 112467888888888776432 3468889987632 222322 21111 12467777778
Q ss_pred EEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCEEEEEEecCCeeEEEEEeCCCCceeeec-ccccc
Q 004766 317 TFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQL-PIEIG 394 (732)
Q Consensus 317 ~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l-~~~~g 394 (732)
|+.- ... ..+|+++++++.. .+.++... -..-.++.+++ ++.||++.... .+|++++++ |...+.+ .....
T Consensus 174 y~td-~~~-~~~I~r~~~dG~~-~~~~~~~~-~~~PnGla~d~~~~~lY~aD~~~--~~I~~~~~d-G~~~~~~~~~~~~ 246 (349)
T 3v64_C 174 YWTD-WGN-TPRIEASSMDGSG-RRIIADTH-LFWPNGLTIDYAGRRMYWVDAKH--HVIERANLD-GSHRKAVISQGLP 246 (349)
T ss_dssp EEEE-CSS-SCEEEEEETTSCS-CEESCCSS-CSCEEEEEEETTTTEEEEEETTT--TEEEEEETT-SCSCEEEECSSCS
T ss_pred EEec-cCC-CCEEEEEeCCCCC-cEEEEECC-CCCcceEEEeCCCCEEEEEECCC--CEEEEEeCC-CCceEEEEeCCCC
Confidence 7653 322 3689999988754 34444432 23456788884 47788876544 589999987 5432333 22222
Q ss_pred eeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 395 SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 395 ~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
...+++. +++.++++- + .-..+.+++..+|+
T Consensus 247 ~P~giav--~~~~ly~td--~-~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 247 HPFAITV--FEDSLYWTD--W-HTKSINSANKFTGK 277 (349)
T ss_dssp SEEEEEE--ETTEEEEEE--T-TTTEEEEEETTTCC
T ss_pred CceEEEE--ECCEEEEec--C-CCCeEEEEEccCCC
Confidence 2334444 334555542 1 23567777755554
No 446
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=97.94 E-value=3.3e-05 Score=82.01 Aligned_cols=115 Identities=11% Similarity=0.046 Sum_probs=65.8
Q ss_pred CCccEEEEEcCCCCccC------CCCcCh---hHHHHHHhcCcEEEEEcccCCCCCchhHH------hcccccCCcc---
Q 004766 479 GSHPCLLYGYGGFNISV------TPSFSV---SRTILMRHLGAVFCIANIRGGGEYGEEWH------KGGALAKKQN--- 540 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~------~~~~~~---~~~~~l~~~G~~v~~~~~rG~g~~g~~~~------~~~~~~~~~~--- 540 (732)
+..|.||++||..+... ...|.. .+...|.++||.|+++|+||.|.....-. ..+....+..
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~ 129 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSE 129 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccc
Confidence 45677999999877421 233431 34566666899999999999765321100 0000000000
Q ss_pred --HHHHHHHHHHHHHHcCCCC-CCcEEEEecChhHHHHHHHHhh--------------------------CCCeeeEEEE
Q 004766 541 --CFDDFISASEYLISAGYTQ-SRKLCIEGGSNGGLLVGACINQ--------------------------RPDLFGCALA 591 (732)
Q Consensus 541 --~~~D~~~~~~~l~~~~~~d-~~~i~i~G~S~GG~l~~~~~~~--------------------------~p~~f~a~v~ 591 (732)
.++++.+.+..+++. .. .+++.++||||||+++..++.. +|++++.+|+
T Consensus 130 ~~~~~~~a~dl~~ll~~--l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~ 207 (431)
T 2hih_A 130 KYGHERYGKTYEGVLKD--WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITT 207 (431)
T ss_dssp HHTCCSEEEEECCSCTT--CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEE
T ss_pred cCCHHHHHHHHHHHHHH--hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEE
Confidence 000000000001111 11 2689999999999999988765 6889999887
Q ss_pred cCCc
Q 004766 592 HVGV 595 (732)
Q Consensus 592 ~~p~ 595 (732)
..+.
T Consensus 208 i~tP 211 (431)
T 2hih_A 208 IATP 211 (431)
T ss_dssp ESCC
T ss_pred ECCC
Confidence 7653
No 447
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.92 E-value=0.0015 Score=67.67 Aligned_cols=250 Identities=8% Similarity=0.014 Sum_probs=125.8
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc----c---cceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA----L---SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~----~---~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
..++.+||||+.++ +....+....+|+.++ +|+..+.. . ......+++++|||+ |+++-...
T Consensus 19 p~~va~~~~g~~~v-~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~------- 87 (343)
T 2qe8_A 19 PGNITLTPDGRLFL-SLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGN------- 87 (343)
T ss_dssp EEEEEECTTSCEEE-EECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHH-------
T ss_pred cceEEECCCCCEEE-EeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCC-------
Confidence 45888999998533 3222111114677777 56543110 0 111246889999985 66552110
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCC----CCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCC
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPE----HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEG 282 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~----~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 282 (732)
......+|+++++.++... ..+..+. ...+..++++++++..+++..... .....|+++|+.++...
T Consensus 88 ------~~~~~~~i~~~d~~tg~~~--~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~-~~~~~i~v~d~~~g~~~ 158 (343)
T 2qe8_A 88 ------QSKSVPKLVAWDTLNNQLS--RVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP-DDKAALIRVDLQTGLAA 158 (343)
T ss_dssp ------HHTSCCEEEEEETTTTEEE--EEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS-GGGCEEEEEETTTCCEE
T ss_pred ------CcCCCCeEEEEECCCCeEE--EEEECChhhcccccccceEEEecCCCEEEEEcCcc-CCCCeEEEEECCCCCEE
Confidence 0001357899998765421 2222211 112335788998877776654311 12456889998764310
Q ss_pred cccccccC-CCC--CcEEeeec--------------c--cceEEEEEecCCeEEEEeCCCCCCceEEEEeCC---CCC--
Q 004766 283 LEGFKKRD-GLL--PFVKLIDG--------------F--DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK---EPN-- 338 (732)
Q Consensus 283 ~~~~~~~~-~~~--~~~~l~~~--------------~--~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~---~~~-- 338 (732)
++.... ... +......+ + ...-..++|||+.||+..... .+|++++.. .+.
T Consensus 159 --r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~---~~l~~~~~~~~~~~~~~ 233 (343)
T 2qe8_A 159 --RVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS---TSMYRIKSADLSNLQLT 233 (343)
T ss_dssp --EECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC---SEEEEEEHHHHTCTTCC
T ss_pred --EEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC---CeEEEEEHHHhcCCCCC
Confidence 000000 000 00000000 0 011125899999888765432 379998742 111
Q ss_pred ------CceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-cceeeEeecccCCcEEEEE
Q 004766 339 ------DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFIS 411 (732)
Q Consensus 339 ------~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-~g~v~~~~~s~d~~~l~~~ 411 (732)
.+. ...+. ....++.+.+++.++++...+ ..|.+||.++|+....+..+ ......+.+++++. ++++
T Consensus 234 ~~~~~~~~~-~~g~~--g~pdgia~d~~G~l~va~~~~--~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~-l~v~ 307 (343)
T 2qe8_A 234 DAELGSKIE-RYSEK--PICDGISIDKDHNIYVGDLAH--SAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGY-LYFD 307 (343)
T ss_dssp HHHHHTTCE-EEEEC--CSCSCEEECTTCCEEEEEGGG--TEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSC-EEEE
T ss_pred hhhhhcceE-ecccC--CCCceEEECCCCCEEEEccCC--CeEEEEECCCCCEEEEEECCceecCCeeEECCCCc-EEEE
Confidence 011 11111 123467777767788876555 57999998447642222223 22345666777654 6665
Q ss_pred Eec
Q 004766 412 FTS 414 (732)
Q Consensus 412 ~ss 414 (732)
.+.
T Consensus 308 ~~~ 310 (343)
T 2qe8_A 308 CNQ 310 (343)
T ss_dssp ECC
T ss_pred eCc
Confidence 543
No 448
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=97.91 E-value=2.4e-05 Score=78.99 Aligned_cols=95 Identities=9% Similarity=-0.088 Sum_probs=60.6
Q ss_pred CCccEEEEEcCCCCccCCCCcChhHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHHHHHcCCC
Q 004766 479 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 558 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 558 (732)
+..|.||++||..+.. ..|.. +...| .+.|+.++.++.. ...+++++.+.+..+++.-.
T Consensus 22 ~~~~~l~~~hg~~~~~--~~~~~-~~~~L---~~~v~~~d~~~~~--------------~~~~~~~~a~~~~~~i~~~~- 80 (283)
T 3tjm_A 22 SSERPLFLVHPIEGST--TVFHS-LASRL---SIPTYGLQCTRAA--------------PLDSIHSLAAYYIDCIRQVQ- 80 (283)
T ss_dssp SSSCCEEEECCTTCCS--GGGHH-HHHHC---SSCEEEECCCTTS--------------CCSCHHHHHHHHHHHHTTTC-
T ss_pred CCCCeEEEECCCCCCH--HHHHH-HHHhc---CceEEEEecCCCC--------------CCCCHHHHHHHHHHHHHHhC-
Confidence 4567889999987753 23332 23333 3889999986421 12345555554444443311
Q ss_pred CCCcEEEEecChhHHHHHHHHhhC---CCeee---EEEEcCC
Q 004766 559 QSRKLCIEGGSNGGLLVGACINQR---PDLFG---CALAHVG 594 (732)
Q Consensus 559 d~~~i~i~G~S~GG~l~~~~~~~~---p~~f~---a~v~~~p 594 (732)
..+++.++|||+||.++..++.+. |+... .+|+..+
T Consensus 81 ~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~ 122 (283)
T 3tjm_A 81 PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDG 122 (283)
T ss_dssp CSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESC
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcC
Confidence 126899999999999999888754 77776 6665543
No 449
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.91 E-value=0.0043 Score=62.05 Aligned_cols=238 Identities=11% Similarity=0.052 Sum_probs=125.9
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc------cceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL------SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~------~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
...++.++|||+. |+.+... ..|+++|.++........ ......++++++.+..|+++..
T Consensus 31 ~p~~v~~~~~g~l--~v~~~~~---~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~--------- 96 (286)
T 1q7f_A 31 EPSGVAVNAQNDI--IVADTNN---HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER--------- 96 (286)
T ss_dssp CEEEEEECTTCCE--EEEEGGG---TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC---------
T ss_pred CCceEEECCCCCE--EEEECCC---CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcC---------
Confidence 3567889999973 3333222 378999987433211110 0012357788533335666531
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
.....|++++.. +. .+..+... ......+++++|||+ |++... . ...|++++.++..
T Consensus 97 --------~~~~~i~~~d~~-g~--~~~~~~~~-~~~~~~~i~~~~~g~-l~v~~~-~---~~~i~~~~~~g~~------ 153 (286)
T 1q7f_A 97 --------SPTHQIQIYNQY-GQ--FVRKFGAT-ILQHPRGVTVDNKGR-IIVVEC-K---VMRVIIFDQNGNV------ 153 (286)
T ss_dssp --------GGGCEEEEECTT-SC--EEEEECTT-TCSCEEEEEECTTSC-EEEEET-T---TTEEEEECTTSCE------
T ss_pred --------CCCCEEEEECCC-Cc--EEEEecCc-cCCCceEEEEeCCCC-EEEEEC-C---CCEEEEEcCCCCE------
Confidence 113467777732 21 11122211 112345789999997 433322 1 2468888865421
Q ss_pred cccCCCCCcEEeee--ccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEE
Q 004766 287 KKRDGLLPFVKLID--GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQM 363 (732)
Q Consensus 287 ~~~~~~~~~~~l~~--~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l 363 (732)
...+.. ... .....++++|+ +|+.... ...|++++.++.. ...+..........++.+++++.+
T Consensus 154 --------~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~---~~~i~~~~~~g~~-~~~~~~~g~~~~p~~i~~d~~G~l 220 (286)
T 1q7f_A 154 --------LHKFGCSKHLEFPNGVVVNDKQE-IFISDNR---AHCVKVFNYEGQY-LRQIGGEGITNYPIGVGINSNGEI 220 (286)
T ss_dssp --------EEEEECTTTCSSEEEEEECSSSE-EEEEEGG---GTEEEEEETTCCE-EEEESCTTTSCSEEEEEECTTCCE
T ss_pred --------EEEeCCCCccCCcEEEEECCCCC-EEEEECC---CCEEEEEcCCCCE-EEEEccCCccCCCcEEEECCCCCE
Confidence 112211 111 11124677764 6654322 3578999975532 333322221134667888876778
Q ss_pred EEEEecCCeeEEEEEeCCCCceeeeccccc--ceeeEeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 364 IVSYLSDVKYVLQIRDLKNGSLLHQLPIEI--GSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 364 ~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~--g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
++....++ ..|.+|+.+ |+.+..+..+. ..+..+.+++++. ++++ +. -.++..++..
T Consensus 221 ~v~~~~~~-~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~---~~~v~v~~~~ 279 (286)
T 1q7f_A 221 LIADNHNN-FNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGS-VVLA-SK---DYRLYIYRYV 279 (286)
T ss_dssp EEEECSSS-CEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTE-EEEE-ET---TTEEEEEECS
T ss_pred EEEeCCCC-EEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCc-EEEE-CC---CCeEEEEEcc
Confidence 87765442 379999975 76656665432 2344677778875 6665 32 2567777654
No 450
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.88 E-value=0.0022 Score=62.53 Aligned_cols=193 Identities=9% Similarity=0.060 Sum_probs=117.0
Q ss_pred eeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEE
Q 004766 181 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 260 (732)
Q Consensus 181 ~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~ 260 (732)
.++.|+ |+ .||.+.... ....|.++++.+++...... .+. ..| ....+++|..|+..
T Consensus 46 qGL~~~-~~-~LyestG~~----------------g~S~v~~vD~~Tgkv~~~~~--l~~-~~F--geGit~~g~~ly~l 102 (262)
T 3nol_A 46 EGFFYR-NG-YFYESTGLN----------------GRSSIRKVDIESGKTLQQIE--LGK-RYF--GEGISDWKDKIVGL 102 (262)
T ss_dssp EEEEEE-TT-EEEEEEEET----------------TEEEEEEECTTTCCEEEEEE--CCT-TCC--EEEEEEETTEEEEE
T ss_pred ceEEEE-CC-EEEEECCCC----------------CCceEEEEECCCCcEEEEEe--cCC-ccc--eeEEEEeCCEEEEE
Confidence 578888 65 666654221 23478889998875432221 111 112 34466778888666
Q ss_pred EecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCc
Q 004766 261 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW 340 (732)
Q Consensus 261 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~ 340 (732)
... .+.++++|.++.+ ....+..+. ..+ .+++||++||+ ++ + ..+|+.+|.++.+..
T Consensus 103 tw~----~~~v~v~D~~t~~-------------~~~ti~~~~-eG~-glt~dg~~L~~-Sd--G-s~~i~~iDp~T~~v~ 159 (262)
T 3nol_A 103 TWK----NGLGFVWNIRNLR-------------QVRSFNYDG-EGW-GLTHNDQYLIM-SD--G-TPVLRFLDPESLTPV 159 (262)
T ss_dssp ESS----SSEEEEEETTTCC-------------EEEEEECSS-CCC-CEEECSSCEEE-CC--S-SSEEEEECTTTCSEE
T ss_pred Eee----CCEEEEEECccCc-------------EEEEEECCC-Cce-EEecCCCEEEE-EC--C-CCeEEEEcCCCCeEE
Confidence 442 3579999998742 122222221 112 25678888775 44 2 357999999887622
Q ss_pred eEecc-C--CCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc------------cceeeEeecccCC
Q 004766 341 FEVIP-E--AERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE------------IGSVNAISARRED 405 (732)
Q Consensus 341 ~~l~~-~--~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~------------~g~v~~~~~s~d~ 405 (732)
..+.- . .+-..+..+.+.+ +.+++..... ..|.++|+++|+.+..|.++ .....+++.++++
T Consensus 160 ~~I~V~~~g~~~~~lNELe~~~-G~lyan~w~~--~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 160 RTITVTAHGEELPELNELEWVD-GEIFANVWQT--NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp EEEECEETTEECCCEEEEEEET-TEEEEEETTS--SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred EEEEeccCCccccccceeEEEC-CEEEEEEccC--CeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence 22211 1 1113345567775 7888766444 48999999999987777653 1234678888888
Q ss_pred cEEEEEEecCCCCceEEEEE
Q 004766 406 SVVFISFTSFLIPGIVYQCN 425 (732)
Q Consensus 406 ~~l~~~~ss~~~p~~~y~~d 425 (732)
++++++--.| +.+|++.
T Consensus 237 ~~lfVTGK~W---p~~~ev~ 253 (262)
T 3nol_A 237 HRLFVTGKLW---PKVFEIT 253 (262)
T ss_dssp TEEEEEETTC---SEEEEEE
T ss_pred CEEEEECCCC---CceEEEE
Confidence 8888776555 4566654
No 451
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.88 E-value=0.01 Score=58.09 Aligned_cols=203 Identities=12% Similarity=0.047 Sum_probs=119.3
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-ccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
.+++++++||++.|..+.+. ...|+.+|+. |+.+... ..+ .+..++++.+||+ ++++.
T Consensus 28 ~lSGla~~~~~~~L~aV~d~----~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~-------------- 87 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINK----PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-FVISD-------------- 87 (255)
T ss_dssp CEEEEEEETTTTEEEEEEET----TEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-EEEEE--------------
T ss_pred CcceeEEeCCCCEEEEEECC----CCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-EEEEE--------------
Confidence 37899999999888776654 2579999998 6654321 221 2457899998874 44442
Q ss_pred cccCCcccEEEEEECCCCCC-CCeEEEe-----cCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcc
Q 004766 211 ETDSNLYHEFYYHFLGTKQS-EDILCWK-----DPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE 284 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~-~~~~v~~-----~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 284 (732)
.+..+++.++++.... ..+.... .+.+.+ +.+++++|+++.|++...+. ...||.++ +....
T Consensus 88 ----E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g-~EGLA~d~~~~~L~va~E~~---p~~i~~~~--g~~~~-- 155 (255)
T 3qqz_A 88 ----ERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCG-FEGLAYSRQDHTFWFFKEKN---PIEVYKVN--GLLSS-- 155 (255)
T ss_dssp ----TTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSC-CEEEEEETTTTEEEEEEESS---SEEEEEEE--STTCS--
T ss_pred ----CCCCcEEEEEcCCCCeeeeeeeeccccccccccCC-cceEEEeCCCCEEEEEECcC---CceEEEEc--ccccC--
Confidence 1235677777765432 1011111 111222 35899999999988765443 35688887 11100
Q ss_pred cccccCCCCCcEEee--------ecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC-CceEeccCCC-----CC
Q 004766 285 GFKKRDGLLPFVKLI--------DGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEAE-----RD 350 (732)
Q Consensus 285 ~~~~~~~~~~~~~l~--------~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~l~~~~~-----~~ 350 (732)
.....+. .-.+..-..+.|..++||+++... ..|+.+|.++.- ....|.+... -.
T Consensus 156 --------~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s---~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~ 224 (255)
T 3qqz_A 156 --------NELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHES---RALQEVTLVGEVIGEMSLTKGSRGLSHNIK 224 (255)
T ss_dssp --------SCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTT---TEEEEECTTCCEEEEEECSTTGGGCSSCCC
T ss_pred --------CceeeecchhhccccccCCceeEEEcCCCCeEEEEECCC---CeEEEEcCCCCEEEEEEcCCccCCcccccC
Confidence 0011110 011222234778888999998764 478999977642 1222332110 12
Q ss_pred ceeEEEEecCCEEEEEEecCCeeEEEEEeCC
Q 004766 351 VLESATAVNLNQMIVSYLSDVKYVLQIRDLK 381 (732)
Q Consensus 351 ~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~ 381 (732)
.-+++++.+++.+|+....| .+|++...
T Consensus 225 qpEGia~d~~G~lyIvsE~n---~~y~f~~~ 252 (255)
T 3qqz_A 225 QAEGVAMDASGNIYIVSEPN---RFYRFTPQ 252 (255)
T ss_dssp SEEEEEECTTCCEEEEETTT---EEEEEEC-
T ss_pred CCCeeEECCCCCEEEEcCCc---eEEEEEec
Confidence 45889998877888886655 78888754
No 452
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.87 E-value=0.0016 Score=68.64 Aligned_cols=235 Identities=11% Similarity=0.073 Sum_probs=121.2
Q ss_pred C--CCCcEEEEEEeccCCceEEEEEEECCCCc---eecccc---------cceeeeeEEEEeCCcEEEEEEecCCCCCCC
Q 004766 140 S--EDAKYLAYALSYSGSDWATIKLMRIEDQI---VEADAL---------SWFKFSSIAWTHDSKGFFYSRYPAPKEGKD 205 (732)
Q Consensus 140 S--PDG~~la~~~~~~G~e~~~i~v~dl~~g~---~~~~~~---------~~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 205 (732)
| +|+++|....- ++ .+|+|+|+.+.. .+..++ .......+.-+||| |+++......
T Consensus 90 ~~~~~r~~l~v~~l--~s--~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~---- 159 (462)
T 2ece_A 90 KPNIERRFLIVPGL--RS--SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEE---- 159 (462)
T ss_dssp CTTCCSCEEEEEBT--TT--CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETT----
T ss_pred CCCccCCEEEEccC--CC--CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcC----
Confidence 7 88988765532 22 489999997551 111222 11123456778999 6665543311
Q ss_pred CCCCCcccCCcccEEEEEECCCCCCCCeEEEecC-CCCeeEEEeEEecCCcEEEEEEec------C----C----cceEE
Q 004766 206 MDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDP-EHPKYIFSGHVTEDGQYLVMCIEE------N----C----DPVNK 270 (732)
Q Consensus 206 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~-~~~~~~~~~~~SpDg~~l~~~~~~------~----~----~~~~~ 270 (732)
...+..|.+.+..|.+.. --++.. ....+.+++.|+||++.++.+.+. . . ....+
T Consensus 160 --------g~~~g~v~vlD~~T~~v~--~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~ 229 (462)
T 2ece_A 160 --------GEGPGGILMLDHYSFEPL--GKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNR 229 (462)
T ss_dssp --------SCSCCEEEEECTTTCCEE--EECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCE
T ss_pred --------CCCCCeEEEEECCCCeEE--EEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCE
Confidence 234457888887765421 112211 112344568899999966544211 0 0 12467
Q ss_pred EEEEeCCCCCCCcccccccCCCCCcEEeeecccceE----E-EEEecCCeEEEEeC-----CCCCCceEEEEeCCCCCCc
Q 004766 271 VYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY----E-VIANDDTVFTFLTN-----KDAPKYKIIRVDLKEPNDW 340 (732)
Q Consensus 271 l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~-~~s~dg~~l~~~s~-----~~~~~~~l~~~d~~~~~~~ 340 (732)
|.++|+++++ ....+..+..... . .++|+|+.+|+... .. ..|+.+..+.+. |
T Consensus 230 V~v~D~~~~k-------------~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls---s~V~v~~~d~g~-~ 292 (462)
T 2ece_A 230 IHFWDLRKRK-------------RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLS---SSIWLWFYEDGK-W 292 (462)
T ss_dssp EEEEETTTTE-------------EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCC---EEEEEEEEETTE-E
T ss_pred EEEEECCCCc-------------EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCC---ceEEEEEecCCc-e
Confidence 9999998632 0122222211111 1 14889988887654 32 244433222221 1
Q ss_pred eE--e--ccC---------CC------CCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCC---ceeeecccc-c----
Q 004766 341 FE--V--IPE---------AE------RDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNG---SLLHQLPIE-I---- 393 (732)
Q Consensus 341 ~~--l--~~~---------~~------~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g---~~~~~l~~~-~---- 393 (732)
+. + ++. .+ .....++.+++|++.++.+.+.. ..|.++|+.+. +.+..+... .
T Consensus 293 ~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~-d~VavfdV~d~~~~~lv~~I~tGG~~~~~ 371 (462)
T 2ece_A 293 NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI-GEVRQYDISNPFKPVLTGKVKLGGIFHRA 371 (462)
T ss_dssp EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT-TEEEEEECSSTTSCEEEEEEECBTTTTCB
T ss_pred eEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC-CEEEEEEecCCCCcEEEEEEEeCCeeccc
Confidence 11 1 011 00 12356788888655444444432 57888887422 223333322 0
Q ss_pred ---------ceeeEeecccCCcEEEEEE
Q 004766 394 ---------GSVNAISARREDSVVFISF 412 (732)
Q Consensus 394 ---------g~v~~~~~s~d~~~l~~~~ 412 (732)
+.-..+.+++||+.|+++-
T Consensus 372 ~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 372 DHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 1234677899999888765
No 453
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.86 E-value=0.00046 Score=70.69 Aligned_cols=203 Identities=9% Similarity=-0.047 Sum_probs=110.8
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEec--CCcEE
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE--DGQYL 257 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~Sp--Dg~~l 257 (732)
...++|+|||+.|+....+ ..|.+|++.++... ++.....+...+..++|++ +|++|
T Consensus 16 V~~v~~s~~g~~lasgs~D-------------------~~v~lwd~~~~~~~--~~~~l~gH~~~V~~v~~~~~~~~~~l 74 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSD-------------------RSVKIFDVRNGGQI--LIADLRGHEGPVWQVAWAHPMYGNIL 74 (316)
T ss_dssp EEEEEECGGGCEEEEEETT-------------------TEEEEEEEETTEEE--EEEEEECCSSCEEEEEECCGGGSSCE
T ss_pred EEEeeEcCCCCEEEEEeCC-------------------CeEEEEEecCCCcE--EEEEEcCCCccEEEEEeCCCCCCCEE
Confidence 4789999999998876543 36888887654221 2222222334567889986 48887
Q ss_pred EEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeeccc-ceEEEEEec--CCeEEEEeCCCCCCceEEEEeC
Q 004766 258 VMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIAND--DTVFTFLTNKDAPKYKIIRVDL 334 (732)
Q Consensus 258 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~d--g~~l~~~s~~~~~~~~l~~~d~ 334 (732)
+..+.++ .+.++|+.++.. .....+..... .....|+|+ |..|+. ... ...|..+|+
T Consensus 75 ~s~s~D~-----~v~iWd~~~~~~-----------~~~~~~~~h~~~V~~v~~~p~~~g~~las-gs~---D~~i~lwd~ 134 (316)
T 3bg1_A 75 ASCSYDR-----KVIIWREENGTW-----------EKSHEHAGHDSSVNSVCWAPHDYGLILAC-GSS---DGAISLLTY 134 (316)
T ss_dssp EEEETTS-----CEEEECCSSSCC-----------CEEEEECCCSSCCCEEEECCTTTCSCEEE-ECS---SSCEEEEEE
T ss_pred EEEECCC-----EEEEEECCCCcc-----------eEEEEccCCCCceEEEEECCCCCCcEEEE-EcC---CCCEEEEec
Confidence 7655433 377788876320 11112211111 112358887 444443 332 234666676
Q ss_pred CCCCCceEec-cCCCCCceeEEEEecC-----------------CEEEEEEecCCeeEEEEEeCCCCc---eeeeccccc
Q 004766 335 KEPNDWFEVI-PEAERDVLESATAVNL-----------------NQMIVSYLSDVKYVLQIRDLKNGS---LLHQLPIEI 393 (732)
Q Consensus 335 ~~~~~~~~l~-~~~~~~~l~~~~~~~~-----------------~~l~~~~~~~g~~~l~~~d~~~g~---~~~~l~~~~ 393 (732)
.++..+.... .......+..+.++++ ..++++...++ .|++||+.++. ....+..+.
T Consensus 135 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~--~v~lWd~~~~~~~~~~~~l~~h~ 212 (316)
T 3bg1_A 135 TGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDN--LIKLWKEEEDGQWKEEQKLEAHS 212 (316)
T ss_dssp CSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTS--BCCEEEECTTSCEEEEECCBCCS
T ss_pred CCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCC--eEEEEEeCCCCccceeeecccCC
Confidence 6543222111 1111234555666653 24566666664 57778876442 223444445
Q ss_pred ceeeEeecccCC---cEEEEEEecCCCCceEEEEECCC
Q 004766 394 GSVNAISARRED---SVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 394 g~v~~~~~s~d~---~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
..|..+.++|++ ..++++.+.. ..+..+++.+
T Consensus 213 ~~V~~v~~sp~~~~~~~~las~s~D---~~v~iw~~~~ 247 (316)
T 3bg1_A 213 DWVRDVAWAPSIGLPTSTIASCSQD---GRVFIWTCDD 247 (316)
T ss_dssp SCEEEEECCCCSSCSCCEEEEEETT---CEEEEEECSS
T ss_pred CceEEEEecCCCCCCCceEEEEcCC---CeEEEEEccC
Confidence 668888888876 2344444432 4678888765
No 454
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.83 E-value=0.024 Score=58.67 Aligned_cols=206 Identities=8% Similarity=-0.045 Sum_probs=125.0
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
..++.|+|.+++|.++ +..+ ..|+.++++++........+ ....+++..+.+..||++-.
T Consensus 75 ~~~l~~d~~~~~ly~~-D~~~---~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~--------------- 135 (349)
T 3v64_C 75 AIALDFHHRRELVFWS-DVTL---DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS--------------- 135 (349)
T ss_dssp EEEEEEETTTTEEEEE-ETTT---TEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET---------------
T ss_pred eEEEEEeccccEEEEE-eccC---CceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcC---------------
Confidence 4578899988877665 4333 27899999877532211111 12367888888888888732
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
....|++.++.+.. ...+.... .....+++++|++.+|++..... ...|+.+++++..
T Consensus 136 ---~~~~I~~~~~dG~~--~~~l~~~~--l~~P~~iavdp~~g~ly~td~~~---~~~I~r~~~dG~~------------ 193 (349)
T 3v64_C 136 ---GTSRIEVANLDGAH--RKVLLWQS--LEKPRAIALHPMEGTIYWTDWGN---TPRIEASSMDGSG------------ 193 (349)
T ss_dssp ---TTTEEEEEETTSCS--CEEEECTT--CSCEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCS------------
T ss_pred ---CCCeEEEEcCCCCc--eEEEEeCC--CCCcceEEEecCcCeEEEeccCC---CCEEEEEeCCCCC------------
Confidence 23468888886543 22333221 12235789999999988775432 2679999987632
Q ss_pred CCcEEeee-ccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecC
Q 004766 293 LPFVKLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSD 370 (732)
Q Consensus 293 ~~~~~l~~-~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~ 370 (732)
.+.+.. +.. ..-..+++++++||+.-. ...+|.++++++.. .+.++... .....++.++. +.+|++...+
T Consensus 194 --~~~~~~~~~~~PnGla~d~~~~~lY~aD~---~~~~I~~~~~dG~~-~~~~~~~~-~~~P~giav~~-~~ly~td~~~ 265 (349)
T 3v64_C 194 --RRIIADTHLFWPNGLTIDYAGRRMYWVDA---KHHVIERANLDGSH-RKAVISQG-LPHPFAITVFE-DSLYWTDWHT 265 (349)
T ss_dssp --CEESCCSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS-CEEEECSS-CSSEEEEEEET-TEEEEEETTT
T ss_pred --cEEEEECCCCCcceEEEeCCCCEEEEEEC---CCCEEEEEeCCCCc-eEEEEeCC-CCCceEEEEEC-CEEEEecCCC
Confidence 122221 111 111247888888887533 24589999988754 34454433 23345677755 7888876544
Q ss_pred CeeEEEEEeCCCCceeeecc
Q 004766 371 VKYVLQIRDLKNGSLLHQLP 390 (732)
Q Consensus 371 g~~~l~~~d~~~g~~~~~l~ 390 (732)
.+|.+++..+|+..+.|.
T Consensus 266 --~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 266 --KSINSANKFTGKNQEIIR 283 (349)
T ss_dssp --TEEEEEETTTCCSCEEEE
T ss_pred --CeEEEEEccCCCccEEec
Confidence 578888865676544443
No 455
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.83 E-value=0.004 Score=63.52 Aligned_cols=153 Identities=14% Similarity=0.126 Sum_probs=81.6
Q ss_pred EeEEec---CCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeeccc--ceE--EEEEecCCeEEEE
Q 004766 247 SGHVTE---DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD--AQY--EVIANDDTVFTFL 319 (732)
Q Consensus 247 ~~~~Sp---Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~--~~~s~dg~~l~~~ 319 (732)
.++||| ||..|+-.+.+ ..|.++|+++++ ....+..+.. ... ..|+|||..++..
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D-----~TIkIWDl~TGk-------------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~ 244 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIM-----NNIVIWNLKTGQ-------------LLKKMHIDDSYQASVCHKAYSEMGLLFIVL 244 (356)
T ss_dssp EEEEEEEETSTTEEEEEETT-----SEEEEEETTTCC-------------EEEEEECCC---CCCEEEEEEETTEEEEEE
T ss_pred eEEeeccCCCCceEEEecCC-----CcEEEEECCCCc-------------EEEEEcCCCcceeeeEEEEECCCCCEEEEe
Confidence 345555 45555443322 348888998753 1333332111 111 2489998877654
Q ss_pred eCC--------CCCCceEEEEeCCCCCCceEec---cCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeee
Q 004766 320 TNK--------DAPKYKIIRVDLKEPNDWFEVI---PEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQ 388 (732)
Q Consensus 320 s~~--------~~~~~~l~~~d~~~~~~~~~l~---~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~ 388 (732)
+.. +.....+..+|+.++.....+. +......+-..... +.++++...|+ .|++||+.+|+.+..
T Consensus 245 s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~Dg--TIkIWDl~tGk~l~t 320 (356)
T 2w18_A 245 SHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSG--TIAIWDLLLGQCTAL 320 (356)
T ss_dssp C------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTS--CEEEEETTTCSEEEE
T ss_pred ccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCC--cEEEEECCCCcEEEE
Confidence 431 2335567778887775322221 22211112122222 34666776674 799999999988777
Q ss_pred cccccc-eeeEeecccCCcEEEEEEecCCCCceEEEEE
Q 004766 389 LPIEIG-SVNAISARREDSVVFISFTSFLIPGIVYQCN 425 (732)
Q Consensus 389 l~~~~g-~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d 425 (732)
+..+.. .+..+.++|||+.|+ +.+. -.+++.||
T Consensus 321 L~gH~~~vvs~vafSPDG~~La-SGS~---D~TIklWd 354 (356)
T 2w18_A 321 LPPVSDQHWSFVKWSGTDSHLL-AGQK---DGNIFVYH 354 (356)
T ss_dssp ECCC--CCCCEEEECSSSSEEE-EECT---TSCEEEEE
T ss_pred ecCCCCCeEEEEEECCCCCEEE-EEEC---CCcEEEec
Confidence 764433 344578899998654 3332 24566655
No 456
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.81 E-value=0.02 Score=58.38 Aligned_cols=221 Identities=11% Similarity=0.019 Sum_probs=124.9
Q ss_pred EEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCC--CCCeEEE
Q 004766 159 TIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQ--SEDILCW 236 (732)
Q Consensus 159 ~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~--~~~~~v~ 236 (732)
.|+.+|+++++............+++|.++++.||++-. ...+|++.++.+.. .....+.
T Consensus 11 ~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~------------------~~~~I~~~~~~g~~~~~~~~~~~ 72 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------------------SQRMICSTQLDRAHGVSSYDTVI 72 (316)
T ss_dssp SEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEET------------------TTTEEEEEEC--------CEEEE
T ss_pred eEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEEC------------------CCCcEEEEECCCCCCCcccEEEE
Confidence 588999988764322111112468999998888988742 23578888886510 1122333
Q ss_pred ecC-CCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-cccc-eEEEEEecC
Q 004766 237 KDP-EHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDA-QYEVIANDD 313 (732)
Q Consensus 237 ~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~-~~~~~s~dg 313 (732)
... ..+ .++++++.++.|++.... ...|.++++++.. .+.+.. .... .-..+.|.+
T Consensus 73 ~~~~~~p---~glavd~~~~~ly~~d~~----~~~I~~~~~~g~~--------------~~~~~~~~~~~P~~iavdp~~ 131 (316)
T 1ijq_A 73 SRDIQAP---DGLAVDWIHSNIYWTDSV----LGTVSVADTKGVK--------------RKTLFRENGSKPRAIVVDPVH 131 (316)
T ss_dssp CSSCSCC---CEEEEETTTTEEEEEETT----TTEEEEEETTSSS--------------EEEEEECTTCCEEEEEEETTT
T ss_pred eCCCCCc---CEEEEeecCCeEEEEECC----CCEEEEEeCCCCc--------------eEEEEECCCCCcceEEeCCCC
Confidence 221 112 367888888887765432 3568888887631 223332 1111 112467777
Q ss_pred CeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCEEEEEEecCCeeEEEEEeCCCCceeeecc-c
Q 004766 314 TVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP-I 391 (732)
Q Consensus 314 ~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~-~ 391 (732)
+.||+.. .+ ...+|+++++++.. .+.++... -..-.++.+.+ ++.||+..... .+|++++++ |...+.+. .
T Consensus 132 g~ly~~d-~~-~~~~I~~~~~dG~~-~~~~~~~~-~~~P~gla~d~~~~~lY~~D~~~--~~I~~~d~d-g~~~~~~~~~ 204 (316)
T 1ijq_A 132 GFMYWTD-WG-TPAKIKKGGLNGVD-IYSLVTEN-IQWPNGITLDLLSGRLYWVDSKL--HSISSIDVN-GGNRKTILED 204 (316)
T ss_dssp TEEEEEE-CS-SSCEEEEEETTSCC-EEEEECSS-CSCEEEEEEETTTTEEEEEETTT--TEEEEEETT-SCSCEEEEEC
T ss_pred CEEEEEc-cC-CCCeEEEEcCCCCC-eEEEEECC-CCCceEEEEeccCCEEEEEECCC--CeEEEEecC-CCceEEEeec
Confidence 7887653 32 23689999987654 34444332 24456788885 47788776544 589999997 54433332 1
Q ss_pred c--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 392 E--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 392 ~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+ .....+++. +++.++++- ..-.++++++..+++
T Consensus 205 ~~~~~~P~giav--~~~~ly~~d---~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 205 EKRLAHPFSLAV--FEDKVFWTD---IINEAIFSANRLTGS 240 (316)
T ss_dssp TTTTSSEEEEEE--ETTEEEEEE---TTTTEEEEEETTTCC
T ss_pred CCccCCcEEEEE--ECCEEEEEE---CCCCeEEEEeCCCCc
Confidence 1 122234444 345566543 234678888876664
No 457
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.80 E-value=0.021 Score=60.43 Aligned_cols=223 Identities=10% Similarity=-0.002 Sum_probs=126.2
Q ss_pred EEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCC--CCCeEE
Q 004766 158 ATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQ--SEDILC 235 (732)
Q Consensus 158 ~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~--~~~~~v 235 (732)
..|+.+|++++.............+++|.+.+..||++-. ...+|+++++.+.. .....+
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~------------------~~~~I~~~~~~g~~~~~~~~~~ 153 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------------------SQRMICSTQLDRAHGVSSYDTV 153 (400)
T ss_dssp TEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEET------------------TTTEEEEEEC------CCCEEE
T ss_pred ceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEec------------------CCCeEEEEEcccCCCCCcceEE
Confidence 3789999987753321111112478999998888988732 23468888876422 122334
Q ss_pred EecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-cccce-EEEEEecC
Q 004766 236 WKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDAQ-YEVIANDD 313 (732)
Q Consensus 236 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~-~~~~s~dg 313 (732)
.... .....++++.+.++.|++.... ...|.++++++.. .+.+.. ..... -..+.|.+
T Consensus 154 ~~~~--~~~p~glavD~~~~~lY~~d~~----~~~I~~~~~~g~~--------------~~~l~~~~~~~P~~iavdp~~ 213 (400)
T 3p5b_L 154 ISRD--IQAPDGLAVDWIHSNIYWTDSV----LGTVSVADTKGVK--------------RKTLFRENGSKPRAIVVDPVH 213 (400)
T ss_dssp ECSS--CSCEEEEEEETTTTEEEEEETT----TTEEEEECTTTCS--------------EEEEEECSSCCEEEEEEETTT
T ss_pred EeCC--CCCcccEEEEecCCceEEEECC----CCeEEEEeCCCCc--------------eEEEEeCCCCCcceEEEeccc
Confidence 3321 1233578888878888766432 3468888887632 223332 22211 12467777
Q ss_pred CeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCEEEEEEecCCeeEEEEEeCCCCceeeecccc
Q 004766 314 TVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE 392 (732)
Q Consensus 314 ~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~ 392 (732)
+.||+. +.+ ...+|+++++++.. .+.++... -..-.++.+.. ++.||++.... ..|++++++ |...+.+...
T Consensus 214 g~ly~t-d~~-~~~~I~~~~~dG~~-~~~~~~~~-l~~P~glavd~~~~~lY~aD~~~--~~I~~~d~d-G~~~~~~~~~ 286 (400)
T 3p5b_L 214 GFMYWT-DWG-TPAKIKKGGLNGVD-IYSLVTEN-IQWPNGITLDLLSGRLYWVDSKL--HSISSIDVN-GGNRKTILED 286 (400)
T ss_dssp TEEEEE-ECS-SSCCEEEEETTSCS-CEEEECSS-CSCEEEEEEETTTTEEEEEETTT--TEEEEEETT-SCCCEEEEEC
T ss_pred CeEEEE-eCC-CCCEEEEEeCCCCc-cEEEEECC-CCceEEEEEEeCCCEEEEEECCC--CEEEEEeCC-CCccEEEEeC
Confidence 777764 332 23579999998765 34554432 24456788884 47788875543 689999997 5443333211
Q ss_pred ---cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 393 ---IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 393 ---~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.....+++. +++.++++- ..-.+|+++|..+|+
T Consensus 287 ~~~l~~P~gl~v--~~~~lywtd---~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 287 EKRLAHPFSLAV--FEDKVFWTD---IINEAIFSANRLTGS 322 (400)
T ss_dssp SSTTSSEEEEEE--ETTEEEEEE---SSSCSEEEEESSSCC
T ss_pred CCCCCCCEEEEE--eCCEEEEec---CCCCeEEEEEcCCCC
Confidence 112223333 445565543 223567788866664
No 458
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=97.77 E-value=0.00011 Score=76.82 Aligned_cols=88 Identities=9% Similarity=0.044 Sum_probs=53.2
Q ss_pred CccEEEEEcCCCCccCC-----CCcCh---hHHHHHHhcCcEEEEEcccCCCCCchhHHhcccccCCccHHHHHHHHHHH
Q 004766 480 SHPCLLYGYGGFNISVT-----PSFSV---SRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEY 551 (732)
Q Consensus 480 ~~P~vv~~hG~~~~~~~-----~~~~~---~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~ 551 (732)
+.|.||++||..+.... ..|.. .+...|.++||.|+++|+||.|.. +..+ .++...++.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s---~~~a----------~~l~~~i~~ 71 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSN---WDRA----------CEAYAQLVG 71 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCH---HHHH----------HHHHHHHHC
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCc---cccH----------HHHHHHHHh
Confidence 44568999998775422 22332 233566668999999999996542 1110 122221210
Q ss_pred --------HHHc-----------C----CCCCCcEEEEecChhHHHHHHHHh
Q 004766 552 --------LISA-----------G----YTQSRKLCIEGGSNGGLLVGACIN 580 (732)
Q Consensus 552 --------l~~~-----------~----~~d~~~i~i~G~S~GG~l~~~~~~ 580 (732)
+.+. . ....+++.++||||||+++..++.
T Consensus 72 ~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~ 123 (387)
T 2dsn_A 72 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVS 123 (387)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHH
T ss_pred hhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHH
Confidence 1100 0 123478999999999999998886
No 459
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.77 E-value=0.029 Score=55.94 Aligned_cols=232 Identities=11% Similarity=0.040 Sum_probs=128.1
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc--cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL--SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
+.++.++|||+.. ++ +..+ ..|+++|.. ++...... ......++++++||+ |+++..
T Consensus 17 ~~~i~~d~~g~l~-v~-~~~~---~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~-------------- 75 (299)
T 2z2n_A 17 PYGITVSDKGKVW-IT-QHKA---NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-VWFTEN-------------- 75 (299)
T ss_dssp EEEEEECTTSCEE-EE-ETTT---TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEEEET--------------
T ss_pred ccceEECCCCCEE-EE-ecCC---CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-EEEeCC--------------
Confidence 5678899999843 33 3222 268889988 65332111 112346788989886 555532
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
....|++++.. +. ...+..+........+.+++||+.. +... . ...|++++..+ .
T Consensus 76 ----~~~~i~~~~~~-g~---~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~-~---~~~i~~~d~~g-~----------- 130 (299)
T 2z2n_A 76 ----AANKIGRITKK-GI---IKEYTLPNPDSAPYGITEGPNGDIW-FTEM-N---GNRIGRITDDG-K----------- 130 (299)
T ss_dssp ----TTTEEEEECTT-SC---EEEEECSSTTCCEEEEEECTTSCEE-EEET-T---TTEEEEECTTC-C-----------
T ss_pred ----CCCeEEEECCC-Cc---EEEEeCCCcCCCceeeEECCCCCEE-EEec-C---CceEEEECCCC-C-----------
Confidence 12357777754 11 2223322122345678889998643 3322 1 24588888732 2
Q ss_pred CCCcEEeee--ccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 292 LLPFVKLID--GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 292 ~~~~~~l~~--~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
...... ... .....++++| .+|+.... ...|+++|. ++. ...+..........++.+.+++.+++...
T Consensus 131 ---~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~---~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 131 ---IREYELPNKGSYPSFITLGSDN-ALWFTENQ---NNAIGRITE-SGD-ITEFKIPTPASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp ---EEEEECSSTTCCEEEEEECTTS-CEEEEETT---TTEEEEECT-TCC-EEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred ---EEEecCCCCCCCCceEEEcCCC-CEEEEeCC---CCEEEEEcC-CCc-EEEeeCCCCCCcceeEEECCCCCEEEEcc
Confidence 111111 111 1112356666 56665432 347999998 554 33331122124456777776667777654
Q ss_pred cCCeeEEEEEeCCCCceeeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.. ..|++++. +|+. ..+..+ ...+..+..++++. ++++.. ....++++|+ ++
T Consensus 202 ~~--~~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~---~~~~i~~~d~-~g 255 (299)
T 2z2n_A 202 IG--NKIGRITT-SGEI-TEFKIPTPNARPHAITAGAGID-LWFTEW---GANKIGRLTS-NN 255 (299)
T ss_dssp TT--TEEEEECT-TCCE-EEEECSSTTCCEEEEEECSTTC-EEEEET---TTTEEEEEET-TT
T ss_pred CC--ceEEEECC-CCcE-EEEECCCCCCCceeEEECCCCC-EEEecc---CCceEEEECC-CC
Confidence 43 47899998 5765 344333 34456677777876 665532 2467999998 44
No 460
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.76 E-value=0.0027 Score=69.29 Aligned_cols=247 Identities=11% Similarity=0.041 Sum_probs=127.2
Q ss_pred EEECC-----CCcEEEEEEeccCCceEEEEEEECCCCceecc-ccc-ceeeeeEEE-E-eCCcEEEEEEecCC---CCCC
Q 004766 137 VSVSE-----DAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALS-WFKFSSIAW-T-HDSKGFFYSRYPAP---KEGK 204 (732)
Q Consensus 137 ~~~SP-----DG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~-~~~~~~~~W-s-pDg~~l~y~~~~~~---~~~~ 204 (732)
+..|. ||++|.. .+..+ ..|.++|+++.+.... .+. +....++++ + ||++++|....... ....
T Consensus 90 ~~~s~t~g~~DG~~lfV-nd~~~---~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~ 165 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFM-NDKAN---TRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGT 165 (595)
T ss_dssp EEEEEETTEEEEEEEEE-EETTT---TEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSS
T ss_pred cccCCCCCCcCCCEEEE-EcCCC---CEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCc
Confidence 66676 9987754 44333 3799999999884431 122 122467777 5 99999977653210 0001
Q ss_pred CCCCCCcccCCcccEEEEEECCCCCCCCeEEEecC--CCCeeEEEeEEecCCcEEEEEEecCCc----------ceE---
Q 004766 205 DMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDP--EHPKYIFSGHVTEDGQYLVMCIEENCD----------PVN--- 269 (732)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~--~~~~~~~~~~~SpDg~~l~~~~~~~~~----------~~~--- 269 (732)
.+. ....+...+-..+..+.+ .+++.. .++ ..++.||||++++.++..... ...
T Consensus 166 ~l~----~~~~~~~~vtvID~~t~~----v~~qI~Vgg~p---d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~ 234 (595)
T 1fwx_A 166 NME----DVANYVNVFTAVDADKWE----VAWQVLVSGNL---DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIV 234 (595)
T ss_dssp STT----CGGGEEEEEEEEETTTTE----EEEEEEESSCC---CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEE
T ss_pred ccc----cccccCceEEEEECCCCe----EEEEEEeCCCc---cceEECCCCCEEEEEecCcccCcchhhccccccceEE
Confidence 110 112334457777776543 233211 122 256789999999887744310 011
Q ss_pred --------------------EEEEEeCCCCCCCcccccccCCCCC-cEEeeecccceEEEEEecCCeEEEEeCCCCCCce
Q 004766 270 --------------------KVYYCDLSALPEGLEGFKKRDGLLP-FVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYK 328 (732)
Q Consensus 270 --------------------~l~~~d~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~ 328 (732)
.+-++|.++.+ ... ...+..+....-..++|||+++|+ ++... .+
T Consensus 235 V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~-----------~~~~~~~Ipvg~~PhGv~~sPDGk~v~V-~~~~s--~~ 300 (595)
T 1fwx_A 235 VFNIAEIEKAIAAGDYQELNGVKVVDGRKEA-----------SSLFTRYIPIANNPHGCNMAPDKKHLCV-AGKLS--PT 300 (595)
T ss_dssp EEEHHHHHHHHHHTCSEEETTEEEEECSGGG-----------CCSSEEEEEEESSCCCEEECTTSSEEEE-ECTTS--SB
T ss_pred EeeccceeEeccCCCeeEECcEEEEeCcccC-----------CceeEEEEecCCCceEEEEcCCCCEEEE-eCCCC--Ce
Confidence 24445544310 011 112222222222358999988775 55443 46
Q ss_pred EEEEeCCCCCC---------ceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCC----------Cceeeec
Q 004766 329 IIRVDLKEPND---------WFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKN----------GSLLHQL 389 (732)
Q Consensus 329 l~~~d~~~~~~---------~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~----------g~~~~~l 389 (732)
+..+|+++... -..+..-..+.--..+.+++++.+|++..-+ ++|.+|++++ .+.+.++
T Consensus 301 VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ld--sqV~kwdi~~a~~~~~g~~~~~vi~ki 378 (595)
T 1fwx_A 301 VTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLD--SQVVKWNIEDAIRAYAGEKVDPIKDKL 378 (595)
T ss_dssp EEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTT--TEEEEEEHHHHHHHHHTCSCCCEEEEE
T ss_pred EEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecC--CcEEEEEhhHhhhhhcccccceeEEEe
Confidence 77888764310 0011111111223456777767666665555 6788899875 2333445
Q ss_pred ccc--ccee---eEeecccCCcEEEEEEecC
Q 004766 390 PIE--IGSV---NAISARREDSVVFISFTSF 415 (732)
Q Consensus 390 ~~~--~g~v---~~~~~s~d~~~l~~~~ss~ 415 (732)
... .|.. .+.+.++||+.|+ +.+.+
T Consensus 379 dV~yqpGh~~~~~g~t~~~DGk~l~-~~Nk~ 408 (595)
T 1fwx_A 379 DVHYQPGHLKTVMGETLDATNDWLV-CLSKF 408 (595)
T ss_dssp ECSSCEEEEEETTTTSTTCCSSEEE-EEESC
T ss_pred ecccccccceeccceEeCCCCCEEE-EcCCC
Confidence 443 2322 1235688998765 34433
No 461
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.75 E-value=0.0032 Score=63.95 Aligned_cols=193 Identities=11% Similarity=0.114 Sum_probs=109.9
Q ss_pred eeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEE
Q 004766 181 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 260 (732)
Q Consensus 181 ~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~ 260 (732)
.+++|+|||+.|+++.. ....|++++.. +. ..++..+. ....++.+++||+.++ .
T Consensus 48 egp~~~~~g~~l~~~d~------------------~~~~i~~~~~~-g~---~~~~~~~~--~~~~gl~~d~dG~l~v-~ 102 (305)
T 3dr2_A 48 EGPAWWEAQRTLVWSDL------------------VGRRVLGWRED-GT---VDVLLDAT--AFTNGNAVDAQQRLVH-C 102 (305)
T ss_dssp EEEEEEGGGTEEEEEET------------------TTTEEEEEETT-SC---EEEEEESC--SCEEEEEECTTSCEEE-E
T ss_pred cCCeEeCCCCEEEEEEC------------------CCCEEEEEeCC-CC---EEEEeCCC--CccceeeECCCCCEEE-E
Confidence 57999999999988742 23468888873 32 23333332 2456889999999543 3
Q ss_pred EecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeeccc------ceEEEEEecCCeEEEEe-----CC-------
Q 004766 261 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD------AQYEVIANDDTVFTFLT-----NK------- 322 (732)
Q Consensus 261 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~s~dg~~l~~~s-----~~------- 322 (732)
. .. ...|++++.++ . ...+..... ..-..++++|+ +||.- ..
T Consensus 103 ~-~~---~~~v~~~~~~g-~--------------~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 103 E-HG---RRAITRSDADG-Q--------------AHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp E-TT---TTEEEEECTTS-C--------------EEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCC
T ss_pred E-CC---CCEEEEECCCC-C--------------EEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCcccccccccc
Confidence 2 11 24588888753 2 222222111 01124778775 66531 10
Q ss_pred --CCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCC-EEEEEEecC---CeeEEEEEeCCCCcee--eec-cccc
Q 004766 323 --DAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSD---VKYVLQIRDLKNGSLL--HQL-PIEI 393 (732)
Q Consensus 323 --~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~l~~~~~~~---g~~~l~~~d~~~g~~~--~~l-~~~~ 393 (732)
......|+++|.++++ ++.+. . .....++.+++++ .||+..... +...|++++++.+... +.+ ..+.
T Consensus 163 ~~~~~~~~v~~~d~~~g~-~~~~~-~--~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~ 238 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSP-LQRMA-D--LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD 238 (305)
T ss_dssp CCSSSCEEEEEECSSSCC-CEEEE-E--ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS
T ss_pred ccccCCCeEEEEcCCCCc-EEEEe-c--CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC
Confidence 0124679999987766 45444 2 2345678888765 466665432 1257999998644310 111 1123
Q ss_pred ceeeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 394 GSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 394 g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+....+..+++|+ ++++. ...+++++...
T Consensus 239 ~~pdgi~~d~~G~-lwv~~-----~~gv~~~~~~g 267 (305)
T 3dr2_A 239 GLPDGFCVDRGGW-LWSSS-----GTGVCVFDSDG 267 (305)
T ss_dssp SCCCSEEECTTSC-EEECC-----SSEEEEECTTS
T ss_pred CCCCeEEECCCCC-EEEec-----CCcEEEECCCC
Confidence 3444566778887 66543 34699999853
No 462
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.68 E-value=0.0076 Score=64.05 Aligned_cols=194 Identities=9% Similarity=0.013 Sum_probs=106.7
Q ss_pred EEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc----c-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 137 VSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA----L-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 137 ~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~----~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
+.|+|+|++|..+ +..+.. .|++++..++...... . ......+++++|++..||++ .
T Consensus 176 ia~~~~g~~l~~~-d~~~~~--~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~-d-------------- 237 (409)
T 3hrp_A 176 PAVTKDKQRVYSI-GWEGTH--TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV-D-------------- 237 (409)
T ss_dssp CEECTTSSEEEEE-BSSTTC--EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE-C--------------
T ss_pred eeEecCCCcEEEE-ecCCCc--eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEE-E--------------
Confidence 7899999976555 443332 7899998876532111 1 11123678999966677774 1
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEec---CCCCeeE-E-EeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKD---PEHPKYI-F-SGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~---~~~~~~~-~-~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
...+|++++..++. ..++.. ....... . .++++|++..|++.... ...|+.++.++.
T Consensus 238 ----~~~~I~~~d~~~~~---~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~----~~~I~~~~~~g~------- 299 (409)
T 3hrp_A 238 ----SNKNFGRFNVKTQE---VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN----LSSVYKITPDGE------- 299 (409)
T ss_dssp ----TTCEEEEEETTTCC---EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT----TTEEEEECTTCC-------
T ss_pred ----CCCcEEEEECCCCC---EEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC----CCEEEEEecCCC-------
Confidence 12479999987653 233311 0011121 2 78999987777665422 356888887652
Q ss_pred cccCCCCCcEEeeec---------------cc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCC--
Q 004766 287 KKRDGLLPFVKLIDG---------------FD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE-- 348 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~---------------~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~-- 348 (732)
...+... +. ..-..++++|+ ||+. +.. .+.+|.++++.++. ...+.....
T Consensus 300 --------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyva-d~~-~~~~I~~~~~~~G~-v~~~~g~~~~~ 367 (409)
T 3hrp_A 300 --------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIV-DGF-KGYCLRKLDILDGY-VSTVAGQVDVA 367 (409)
T ss_dssp --------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEE-ETT-TTCEEEEEETTTTE-EEEEEECTTCB
T ss_pred --------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEE-eCC-CCCEEEEEECCCCE-EEEEeCCCCCC
Confidence 1111110 11 11124788876 6654 320 25689999976654 444443210
Q ss_pred -----------CCceeEEEEecCCEEEEEEecCCeeEEEEEeC
Q 004766 349 -----------RDVLESATAVNLNQMIVSYLSDVKYVLQIRDL 380 (732)
Q Consensus 349 -----------~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~ 380 (732)
-....++.+.+++.||++...+ .+|+++++
T Consensus 368 g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n--~~Ir~i~~ 408 (409)
T 3hrp_A 368 SQIDGTPLEATFNYPYDICYDGEGGYWIAEAWG--KAIRKYAV 408 (409)
T ss_dssp SCCCBSTTTCCBSSEEEEEECSSSEEEEEESTT--CEEEEEEE
T ss_pred CcCCCChhceEeCCceEEEEcCCCCEEEEECCC--CeEEEEEe
Confidence 0224566666656666665444 45555543
No 463
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.67 E-value=0.0054 Score=60.01 Aligned_cols=200 Identities=16% Similarity=0.206 Sum_probs=114.5
Q ss_pred eeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEE
Q 004766 180 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 259 (732)
Q Consensus 180 ~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 259 (732)
.++++|.||+++||.+... +.+|+..+.. +.....+.+.+. .-..++++.++|++++
T Consensus 29 lSGla~~~~~~~L~aV~d~------------------~~~I~~ld~~-g~v~~~i~l~g~---~D~EGIa~~~~g~~~v- 85 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINK------------------PAAIVEMTTN-GDLIRTIPLDFV---KDLETIEYIGDNQFVI- 85 (255)
T ss_dssp EEEEEEETTTTEEEEEEET------------------TEEEEEEETT-CCEEEEEECSSC---SSEEEEEECSTTEEEE-
T ss_pred cceeEEeCCCCEEEEEECC------------------CCeEEEEeCC-CCEEEEEecCCC---CChHHeEEeCCCEEEE-
Confidence 5899999999988887542 3468888876 322211111111 1235788888887543
Q ss_pred EEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEee-------ecccceEEEEEecCCeEEEEeCCCCCCceEEEE
Q 004766 260 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-------DGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRV 332 (732)
Q Consensus 260 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~-------~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~ 332 (732)
+ ..+. ..++++++..... . ....... ...+.+-..|+|++++||+...+. ...||.+
T Consensus 86 s-~E~~---~~l~~~~v~~~~~-i---------~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~--p~~i~~~ 149 (255)
T 3qqz_A 86 S-DERD---YAIYVISLTPNSE-V---------KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN--PIEVYKV 149 (255)
T ss_dssp E-ETTT---TEEEEEEECTTCC-E---------EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS--SEEEEEE
T ss_pred E-ECCC---CcEEEEEcCCCCe-e---------eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC--CceEEEE
Confidence 3 2222 4577777654211 0 0001110 011112235888888999866553 3478888
Q ss_pred e--CCCCCCceEec-----cCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCCCCceeeecccccc---------e
Q 004766 333 D--LKEPNDWFEVI-----PEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIG---------S 395 (732)
Q Consensus 333 d--~~~~~~~~~l~-----~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~g---------~ 395 (732)
+ +.+.. .+.+- ....-..++++++.+. +++++.+.+. ..|..+|.+ |+.+..+.+..+ .
T Consensus 150 ~g~~~~~~-l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s--~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~q 225 (255)
T 3qqz_A 150 NGLLSSNE-LHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHES--RALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQ 225 (255)
T ss_dssp ESTTCSSC-CEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTT--TEEEEECTT-CCEEEEEECSTTGGGCSSCCCS
T ss_pred cccccCCc-eeeecchhhccccccCCceeEEEcCCCCeEEEEECCC--CeEEEEcCC-CCEEEEEEcCCccCCcccccCC
Confidence 7 12211 22220 0111234677888764 6788877655 578889986 776555555422 4
Q ss_pred eeEeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 396 VNAISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 396 v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
..+++++++|+ +|++ + .|..+|++...
T Consensus 226 pEGia~d~~G~-lyIv-s---E~n~~y~f~~~ 252 (255)
T 3qqz_A 226 AEGVAMDASGN-IYIV-S---EPNRFYRFTPQ 252 (255)
T ss_dssp EEEEEECTTCC-EEEE-E---TTTEEEEEEC-
T ss_pred CCeeEECCCCC-EEEE-c---CCceEEEEEec
Confidence 46788889886 6665 3 45689988754
No 464
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.67 E-value=0.0053 Score=59.87 Aligned_cols=190 Identities=8% Similarity=-0.015 Sum_probs=115.7
Q ss_pred eeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEE
Q 004766 181 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 260 (732)
Q Consensus 181 ~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~ 260 (732)
.++.++ ++.||.+.. ...+|..+++.+++....+ .. . ..| ....+++|+.|+..
T Consensus 58 qGL~~~--~~~Ly~stG------------------~~g~v~~iD~~Tgkv~~~~-l~--~-~~F--geGit~~g~~Ly~l 111 (268)
T 3nok_A 58 QGLVFH--QGHFFESTG------------------HQGTLRQLSLESAQPVWME-RL--G-NIF--AEGLASDGERLYQL 111 (268)
T ss_dssp EEEEEE--TTEEEEEET------------------TTTEEEECCSSCSSCSEEE-EC--T-TCC--EEEEEECSSCEEEE
T ss_pred ceEEEE--CCEEEEEcC------------------CCCEEEEEECCCCcEEeEE-CC--C-Ccc--eeEEEEeCCEEEEE
Confidence 467776 467777642 2224888899888765544 32 2 223 33456788888666
Q ss_pred EecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCc
Q 004766 261 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW 340 (732)
Q Consensus 261 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~ 340 (732)
... .+.++++|.++.+ ....+.... ..+ .+++||++||+ ++ + ..+|+.+|.++.+..
T Consensus 112 tw~----~~~v~V~D~~Tl~-------------~~~ti~~~~-eGw-GLt~Dg~~L~v-Sd--G-s~~l~~iDp~T~~v~ 168 (268)
T 3nok_A 112 TWT----EGLLFTWSGMPPQ-------------RERTTRYSG-EGW-GLCYWNGKLVR-SD--G-GTMLTFHEPDGFALV 168 (268)
T ss_dssp ESS----SCEEEEEETTTTE-------------EEEEEECSS-CCC-CEEEETTEEEE-EC--S-SSEEEEECTTTCCEE
T ss_pred Ecc----CCEEEEEECCcCc-------------EEEEEeCCC-cee-EEecCCCEEEE-EC--C-CCEEEEEcCCCCeEE
Confidence 432 3679999998742 122222211 112 25678888775 44 2 457999999887632
Q ss_pred eEec-cCC--CCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc-------------cceeeEeecccC
Q 004766 341 FEVI-PEA--ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-------------IGSVNAISARRE 404 (732)
Q Consensus 341 ~~l~-~~~--~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~-------------~g~v~~~~~s~d 404 (732)
..+. ... +-..+..+.+.+ +.|++..... ..|.++|+++|+.+..|.+. .....+++.+++
T Consensus 169 ~~I~V~~~g~~v~~lNeLe~~d-G~lyanvw~s--~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 169 GAVQVKLRGQPVELINELECAN-GVIYANIWHS--SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp EEEECEETTEECCCEEEEEEET-TEEEEEETTC--SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTT
T ss_pred EEEEeCCCCcccccccccEEeC-CEEEEEECCC--CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCC
Confidence 2221 111 112456677776 7888766443 58999999999987777653 124467888888
Q ss_pred CcEEEEEEecCCCCceEEEEE
Q 004766 405 DSVVFISFTSFLIPGIVYQCN 425 (732)
Q Consensus 405 ~~~l~~~~ss~~~p~~~y~~d 425 (732)
+++++++---| +.+|.+.
T Consensus 246 ~~rlfVTGK~W---p~~~ev~ 263 (268)
T 3nok_A 246 SGRIFMTGKLW---PRLFEVR 263 (268)
T ss_dssp TCCEEEEETTC---SEEEEEE
T ss_pred CCEEEEeCCCC---CceEEEE
Confidence 88888765444 4566554
No 465
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.66 E-value=0.015 Score=59.57 Aligned_cols=186 Identities=7% Similarity=-0.050 Sum_probs=99.7
Q ss_pred EEEEeCCCCCceEEeCCCCcCCCCCEEEEeEEECCCCcEEEEEEeccC--CceEEEEEEECCCCceecccccceeeeeEE
Q 004766 107 LYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSG--SDWATIKLMRIEDQIVEADALSWFKFSSIA 184 (732)
Q Consensus 107 l~~r~~~~~~~~~l~D~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G--~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~ 184 (732)
|++.+..++..+.+.+...- .....+..+.++|||+.+ ++..... .....|+.+| +|+............+++
T Consensus 111 l~~~d~~~g~~~~~~~~~~~--~~~~~~~~i~~d~~G~l~-v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~ 185 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESD--LPGNRSNDGRMHPSGALW-IGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSIC 185 (326)
T ss_dssp EEEEETTTCCEEEEECSSTT--CTTEEEEEEEECTTSCEE-EEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEE
T ss_pred EEEEECCCCcEEEEeeCCCC--CCCCCCCCEEECCCCCEE-EEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeE
Confidence 66666544554444443210 112457789999999843 3332110 1125788888 565332111111236799
Q ss_pred EEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECC--CC-CCCC-eEEEecCCCCeeEEEeEEecCCcEEEEE
Q 004766 185 WTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLG--TK-QSED-ILCWKDPEHPKYIFSGHVTEDGQYLVMC 260 (732)
Q Consensus 185 WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lg--t~-~~~~-~~v~~~~~~~~~~~~~~~SpDg~~l~~~ 260 (732)
|+|||+.|+++.. ....|+++++. ++ .... ..+...........++.++++|... +.
T Consensus 186 ~s~dg~~lyv~~~------------------~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lw-va 246 (326)
T 2ghs_A 186 FSPDGTTGYFVDT------------------KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW-NA 246 (326)
T ss_dssp ECTTSCEEEEEET------------------TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE-EE
T ss_pred EcCCCCEEEEEEC------------------CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEE-EE
Confidence 9999999988742 23478888875 43 2222 2232222222344578899999743 33
Q ss_pred EecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecc-cceEEEEE-ecCCeEEEEeCCCCC----------Cce
Q 004766 261 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF-DAQYEVIA-NDDTVFTFLTNKDAP----------KYK 328 (732)
Q Consensus 261 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~s-~dg~~l~~~s~~~~~----------~~~ 328 (732)
... ...|++++.++.. ...+.... ......|+ ++++.||+.+...+. .+.
T Consensus 247 ~~~----~~~v~~~d~~g~~--------------~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~~~~~~~~~~p~~g~ 308 (326)
T 2ghs_A 247 RWG----EGAVDRYDTDGNH--------------IARYEVPGKQTTCPAFIGPDASRLLVTSAREHLDDDAITANPQHGL 308 (326)
T ss_dssp EET----TTEEEEECTTCCE--------------EEEEECSCSBEEEEEEESTTSCEEEEEEBCTTCCHHHHHHCTTTTC
T ss_pred EeC----CCEEEEECCCCCE--------------EEEEECCCCCcEEEEEecCCCCEEEEEecCCCCChhHhccCCCCce
Confidence 321 1358888874310 22222211 11223476 788899988765431 256
Q ss_pred EEEEeC
Q 004766 329 IIRVDL 334 (732)
Q Consensus 329 l~~~d~ 334 (732)
|+++++
T Consensus 309 ~~~~~~ 314 (326)
T 2ghs_A 309 TFELGI 314 (326)
T ss_dssp EEECSS
T ss_pred EEEEeC
Confidence 777764
No 466
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.65 E-value=0.038 Score=56.32 Aligned_cols=206 Identities=9% Similarity=-0.004 Sum_probs=123.5
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecc-cccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~-~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
..++.|.+.++.|.++ +..+ ..|+.++++++..... ...+ ....++++.+.+..||++-.
T Consensus 37 ~~~ld~d~~~~~lyw~-D~~~---~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~-------------- 98 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWS-DVSE---EAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS-------------- 98 (318)
T ss_dssp EEEEEEEGGGTEEEEE-ETTT---TEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEET--------------
T ss_pred cEEEEEEeCCCEEEEE-ECCC---CcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEEC--------------
Confidence 3467799887777555 4433 3789999987642110 0111 12357888877878887631
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
...+|.+.++.+.. ...+.... ...-.++++.|.+.+|++.... . ...|+.+++++..
T Consensus 99 ----~~~~I~~~~~dG~~--~~~l~~~~--~~~P~giavdp~~g~ly~td~~-~--~~~I~r~~~dG~~----------- 156 (318)
T 3sov_A 99 ----ETNRIEVSNLDGSL--RKVLFWQE--LDQPRAIALDPSSGFMYWTDWG-E--VPKIERAGMDGSS----------- 156 (318)
T ss_dssp ----TTTEEEEEETTSCS--CEEEECSS--CSSEEEEEEEGGGTEEEEEECS-S--SCEEEEEETTSCS-----------
T ss_pred ----CCCEEEEEECCCCc--EEEEEeCC--CCCccEEEEeCCCCEEEEEecC-C--CCEEEEEEcCCCC-----------
Confidence 23468888876532 22333221 1223578899988888776532 1 3579999987631
Q ss_pred CCCcEEeee-cccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEec
Q 004766 292 LLPFVKLID-GFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLS 369 (732)
Q Consensus 292 ~~~~~~l~~-~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~ 369 (732)
.+.+.. +... .-..+++++++||+.-. ...+|+++++++.. .+.++... ...-.++.+.. +.+|++...
T Consensus 157 ---~~~~~~~~l~~Pnglavd~~~~~lY~aD~---~~~~I~~~d~dG~~-~~~~~~~~-~~~P~glav~~-~~lywtd~~ 227 (318)
T 3sov_A 157 ---RFIIINSEIYWPNGLTLDYEEQKLYWADA---KLNFIHKSNLDGTN-RQAVVKGS-LPHPFALTLFE-DILYWTDWS 227 (318)
T ss_dssp ---CEEEECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS-CEEEECSC-CSCEEEEEEET-TEEEEEETT
T ss_pred ---eEEEEECCCCCccEEEEeccCCEEEEEEC---CCCEEEEEcCCCCc-eEEEecCC-CCCceEEEEeC-CEEEEEecC
Confidence 222322 2111 11258888889987532 35689999998754 45555422 23345677765 788887543
Q ss_pred CCeeEEEEEeCCCCceeeecc
Q 004766 370 DVKYVLQIRDLKNGSLLHQLP 390 (732)
Q Consensus 370 ~g~~~l~~~d~~~g~~~~~l~ 390 (732)
+ ..|.+++..+|+..+.|.
T Consensus 228 ~--~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 228 T--HSILACNKYTGEGLREIH 246 (318)
T ss_dssp T--TEEEEEETTTCCSCEEEE
T ss_pred C--CeEEEEECCCCCceEEEe
Confidence 3 589999987787645554
No 467
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.65 E-value=0.09 Score=55.45 Aligned_cols=207 Identities=7% Similarity=0.004 Sum_probs=119.8
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc----eecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI----VEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~----~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
..++.|++.++.|.++ +..+ ..|+.+++.++. ...... ......+++..+.++.||++-.
T Consensus 114 ~~~l~~d~~~~~lyws-D~~~---~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~----------- 178 (400)
T 3p5b_L 114 VVALDTEVASNRIYWS-DLSQ---RMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----------- 178 (400)
T ss_dssp EEEEEEETTTTEEEEE-ETTT---TEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEET-----------
T ss_pred ceEEeeeeccCceEEE-ecCC---CeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEEC-----------
Confidence 4578899988877655 4333 268888887632 111111 1112356787776778887731
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
...+|.+.++.+... ..+..... ....++++.|.+.+|+++.... ...|+.+++++..
T Consensus 179 -------~~~~I~~~~~~g~~~--~~l~~~~~--~~P~~iavdp~~g~ly~td~~~---~~~I~~~~~dG~~-------- 236 (400)
T 3p5b_L 179 -------VLGTVSVADTKGVKR--KTLFRENG--SKPRAIVVDPVHGFMYWTDWGT---PAKIKKGGLNGVD-------- 236 (400)
T ss_dssp -------TTTEEEEECTTTCSE--EEEEECSS--CCEEEEEEETTTTEEEEEECSS---SCCEEEEETTSCS--------
T ss_pred -------CCCeEEEEeCCCCce--EEEEeCCC--CCcceEEEecccCeEEEEeCCC---CCEEEEEeCCCCc--------
Confidence 234688888765432 23333221 1235789999988887765322 2469999987632
Q ss_pred cCCCCCcEEeee-cccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC-CCCceeEEEEecCCEEEE
Q 004766 289 RDGLLPFVKLID-GFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-ERDVLESATAVNLNQMIV 365 (732)
Q Consensus 289 ~~~~~~~~~l~~-~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~l~~~~~~~~~~l~~ 365 (732)
.+.+.. +... .-..+++++++||+.-. ...+|.++|+++.. .+.++... .-..-.++.++. +.+|+
T Consensus 237 ------~~~~~~~~l~~P~glavd~~~~~lY~aD~---~~~~I~~~d~dG~~-~~~~~~~~~~l~~P~gl~v~~-~~lyw 305 (400)
T 3p5b_L 237 ------IYSLVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFE-DKVFW 305 (400)
T ss_dssp ------CEEEECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCC-CEEEEECSSTTSSEEEEEEET-TEEEE
T ss_pred ------cEEEEECCCCceEEEEEEeCCCEEEEEEC---CCCEEEEEeCCCCc-cEEEEeCCCCCCCCEEEEEeC-CEEEE
Confidence 223322 1111 11247888888887532 34689999998765 44454321 112234666665 78888
Q ss_pred EEecCCeeEEEEEeCCCCceeeecc
Q 004766 366 SYLSDVKYVLQIRDLKNGSLLHQLP 390 (732)
Q Consensus 366 ~~~~~g~~~l~~~d~~~g~~~~~l~ 390 (732)
+.... ..|++++..+|+.++.|.
T Consensus 306 td~~~--~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 306 TDIIN--EAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EESSS--CSEEEEESSSCCCCEEEE
T ss_pred ecCCC--CeEEEEEcCCCCceEEEe
Confidence 76444 578889866687655554
No 468
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.60 E-value=0.07 Score=53.06 Aligned_cols=232 Identities=9% Similarity=-0.002 Sum_probs=126.9
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccccc--ceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALS--WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
..++.+++||+. |+.+..+ ..|.++|.. ++....... .....++++++||+ |+++..
T Consensus 22 p~~i~~d~~g~l--~v~~~~~---~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~-------------- 80 (300)
T 2qc5_A 22 PYGITSSEDGKV--WFTQHKA---NKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD-IWFTEN-------------- 80 (300)
T ss_dssp EEEEEECTTSCE--EEEETTT---TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEET--------------
T ss_pred cceeeECCCCCE--EEEcCCC---CeEEEECCC-CceEEEECCCCCCcceeEEECCCCC-EEEEec--------------
Confidence 457788999983 3333222 268888887 654321111 12246788888886 555431
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
....|++++.. +.. ..+..+........++++++|+.. +.. .. ...|+.++.++ .
T Consensus 81 ----~~~~v~~~d~~-g~~---~~~~~~~~~~~~~~i~~~~~g~l~-v~~-~~---~~~i~~~~~~g-~----------- 135 (300)
T 2qc5_A 81 ----GANKIGKLSKK-GGF---TEYPLPQPDSGPYGITEGLNGDIW-FTQ-LN---GDRIGKLTADG-T----------- 135 (300)
T ss_dssp ----TTTEEEEECTT-SCE---EEEECSSTTCCEEEEEECSTTCEE-EEE-TT---TTEEEEECTTS-C-----------
T ss_pred ----CCCeEEEECCC-CCe---EEecCCCCCCCCccceECCCCCEE-EEc-cC---CCeEEEECCCC-C-----------
Confidence 22357777765 221 222222112334578888999743 332 11 23588888763 2
Q ss_pred CCCcEEee-e-cccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 292 LLPFVKLI-D-GFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 292 ~~~~~~l~-~-~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
..... . ...... ..++++|+ +|+.... ...|++++. ++. ...+..........++.+.+++.+++...
T Consensus 136 ---~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~---~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 206 (300)
T 2qc5_A 136 ---IYEYDLPNKGSYPAFITLGSDNA-LWFTENQ---NNSIGRITN-TGK-LEEYPLPTNAAAPVGITSGNDGALWFVEI 206 (300)
T ss_dssp ---EEEEECSSTTCCEEEEEECTTSS-EEEEETT---TTEEEEECT-TCC-EEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred ---EEEccCCCCCCCceeEEECCCCC-EEEEecC---CCeEEEECC-CCc-EEEeeCCCCCCCcceEEECCCCCEEEEcc
Confidence 11111 1 111111 23567776 6665432 346999998 444 33332222234466777776677877765
Q ss_pred cCCeeEEEEEeCCCCceeeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.. ..|++++. +|+. ..+..+ ...+..+..++++. ++++.. ....++++|+ ++
T Consensus 207 ~~--~~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~d~~g~-l~v~~~---~~~~i~~~~~-~g 260 (300)
T 2qc5_A 207 MG--NKIGRITT-TGEI-SEYDIPTPNARPHAITAGKNSE-IWFTEW---GANQIGRITN-DN 260 (300)
T ss_dssp TT--TEEEEECT-TCCE-EEEECSSTTCCEEEEEECSTTC-EEEEET---TTTEEEEECT-TS
T ss_pred CC--CEEEEEcC-CCcE-EEEECCCCCCCceEEEECCCCC-EEEecc---CCCeEEEECC-CC
Confidence 44 46889998 4664 333333 33455677777776 666542 2468999998 44
No 469
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.58 E-value=0.0042 Score=61.37 Aligned_cols=192 Identities=8% Similarity=-0.018 Sum_probs=106.4
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
..++.++|||+ | |+.+. + ..|+++|..++......... ....+++++|||+ |+++..
T Consensus 69 p~~i~~~~~g~-l-~v~~~-~---~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~--------------- 126 (270)
T 1rwi_B 69 PQGLAVDGAGT-V-YVTDF-N---NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA-VYVADR--------------- 126 (270)
T ss_dssp CCCEEECTTCC-E-EEEET-T---TEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-EEEEEG---------------
T ss_pred cceeEECCCCC-E-EEEcC-C---CEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-EEEEEC---------------
Confidence 34788999998 3 33333 2 26899998876543221111 1246789999997 555431
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
....|++++.++... ..... .......++++++||+ |++... . ...|++++..+..
T Consensus 127 ---~~~~i~~~~~~~~~~---~~~~~-~~~~~p~~i~~~~~g~-l~v~~~-~---~~~i~~~~~~~~~------------ 182 (270)
T 1rwi_B 127 ---GNNRVVKLAAGSKTQ---TVLPF-TGLNDPDGVAVDNSGN-VYVTDT-D---NNRVVKLEAESNN------------ 182 (270)
T ss_dssp ---GGTEEEEECTTCCSC---EECCC-CSCCSCCCEEECTTCC-EEEEEG-G---GTEEEEECTTTCC------------
T ss_pred ---CCCEEEEEECCCcee---Eeecc-ccCCCceeEEEeCCCC-EEEEEC-C---CCEEEEEecCCCc------------
Confidence 234677776554321 11111 1111234678999998 444332 2 2468888877632
Q ss_pred CCcEEe-eecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecC
Q 004766 293 LPFVKL-IDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSD 370 (732)
Q Consensus 293 ~~~~~l-~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~ 370 (732)
.... ..+... .-..++++| .+|+.... ...|++++.++.. ...+.........++.+.+++.+++....+
T Consensus 183 --~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~---~~~v~~~~~~~~~--~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 183 --QVVLPFTDITAPWGIAVDEAG-TVYVTEHN---TNQVVKLLAGSTT--STVLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp --EEECCCSSCCSEEEEEECTTC-CEEEEETT---TSCEEEECTTCSC--CEECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred --eEeecccCCCCceEEEECCCC-CEEEEECC---CCcEEEEcCCCCc--ceeeccCCCCCceeEEECCCCCEEEEECCC
Confidence 1111 111111 112466776 67765543 3468999987654 222222212346678887766788776655
Q ss_pred CeeEEEEEeCC
Q 004766 371 VKYVLQIRDLK 381 (732)
Q Consensus 371 g~~~l~~~d~~ 381 (732)
.+|.++++.
T Consensus 255 --~~v~~~~~~ 263 (270)
T 1rwi_B 255 --DRVVKLTSL 263 (270)
T ss_dssp --TEEEEECCC
T ss_pred --CEEEEEcCC
Confidence 478888875
No 470
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=97.58 E-value=0.00036 Score=75.43 Aligned_cols=116 Identities=23% Similarity=0.180 Sum_probs=78.0
Q ss_pred CCccEEEEEcCCCCccCCCCc--ChhHHHHHHhcCcEEEEEcccCCCCCch---hHHh--cccccCCccHHHHHHHHHHH
Q 004766 479 GSHPCLLYGYGGFNISVTPSF--SVSRTILMRHLGAVFCIANIRGGGEYGE---EWHK--GGALAKKQNCFDDFISASEY 551 (732)
Q Consensus 479 ~~~P~vv~~hG~~~~~~~~~~--~~~~~~~l~~~G~~v~~~~~rG~g~~g~---~~~~--~~~~~~~~~~~~D~~~~~~~ 551 (732)
+..|++|++ ||-+.. .... ...+..+..+.|..+++..+|=-|+.-. ...+ .-+...-...+.|+...+++
T Consensus 41 ~~gPIfl~~-gGEg~~-~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~ 118 (472)
T 4ebb_A 41 GEGPIFFYT-GNEGDV-WAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRA 118 (472)
T ss_dssp TTCCEEEEE-CCSSCH-HHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHH
T ss_pred CCCcEEEEE-CCCccc-cccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHH
Confidence 447988888 443321 1111 1123456777899999999996444321 1111 01122334568899999998
Q ss_pred HHHcCCCCCCcEEEEecChhHHHHHHHHhhCCCeeeEEEEcCCcc
Q 004766 552 LISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 596 (732)
Q Consensus 552 l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 596 (732)
+...--....+++++|+|+||.|++++-.++|++|.|+++.++++
T Consensus 119 ~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 119 LRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp HHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 876633344789999999999999999999999999998876543
No 471
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.58 E-value=0.068 Score=56.29 Aligned_cols=243 Identities=10% Similarity=0.046 Sum_probs=123.4
Q ss_pred EEEEEEECCC-----Cceeccc---ccceeeeeEEE-----------E--eCCcEEEEEEecCCCCCCCCCCCCcccCCc
Q 004766 158 ATIKLMRIED-----QIVEADA---LSWFKFSSIAW-----------T--HDSKGFFYSRYPAPKEGKDMDAGTETDSNL 216 (732)
Q Consensus 158 ~~i~v~dl~~-----g~~~~~~---~~~~~~~~~~W-----------s--pDg~~l~y~~~~~~~~~~~~~~~~~~~~~~ 216 (732)
-.|-++|++. |+++... ..+-...++.| + +|+++|+... .+
T Consensus 43 d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~------------------l~ 104 (462)
T 2ece_A 43 DFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPG------------------LR 104 (462)
T ss_dssp CEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEB------------------TT
T ss_pred CeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEcc------------------CC
Confidence 4677788875 4433211 11112356677 8 8998888763 34
Q ss_pred ccEEEEEECCCCCCCCeEEEecC-------CCCeeEEEeEEecCCcEEEEEEecC--CcceEEEEEEeCCCCCCCccccc
Q 004766 217 YHEFYYHFLGTKQSEDILCWKDP-------EHPKYIFSGHVTEDGQYLVMCIEEN--CDPVNKVYYCDLSALPEGLEGFK 287 (732)
Q Consensus 217 ~~~v~~~~lgt~~~~~~~v~~~~-------~~~~~~~~~~~SpDg~~l~~~~~~~--~~~~~~l~~~d~~~~~~~~~~~~ 287 (732)
..+|++.+..+.+..-.++-... -.-..-..+..+||| |+++...+ ......+.++|.++.+.
T Consensus 105 s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v------ 176 (462)
T 2ece_A 105 SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEP------ 176 (462)
T ss_dssp TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCE------
T ss_pred CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeE------
Confidence 56799999987654433322110 011123456789999 44443222 12246799999887431
Q ss_pred ccCCCCCcEEeeeccc---ceEE-EEEecCCeEEEEeCCC----------------CCCceEEEEeCCCCCCceEeccCC
Q 004766 288 KRDGLLPFVKLIDGFD---AQYE-VIANDDTVFTFLTNKD----------------APKYKIIRVDLKEPNDWFEVIPEA 347 (732)
Q Consensus 288 ~~~~~~~~~~l~~~~~---~~~~-~~s~dg~~l~~~s~~~----------------~~~~~l~~~d~~~~~~~~~l~~~~ 347 (732)
...+..+.. ..|. .|+|+++. ++.++.+ ....+|..+|+++++...++-...
T Consensus 177 -------~~~~~~~~~~~~~~Yd~~~~p~~~~-mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~ 248 (462)
T 2ece_A 177 -------LGKWEIDRGDQYLAYDFWWNLPNEV-LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE 248 (462)
T ss_dssp -------EEECCSBCTTCCCCCCEEEETTTTE-EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT
T ss_pred -------EEEEccCCCCccccceEEECCCCCE-EEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC
Confidence 112211111 1222 36898884 4456521 113579999998764223332211
Q ss_pred CCCceeEEEE--ecCC-EEEEEEe---cCCeeEEEEEeCCCCce--eeecccc------------------cceeeEeec
Q 004766 348 ERDVLESATA--VNLN-QMIVSYL---SDVKYVLQIRDLKNGSL--LHQLPIE------------------IGSVNAISA 401 (732)
Q Consensus 348 ~~~~l~~~~~--~~~~-~l~~~~~---~~g~~~l~~~d~~~g~~--~~~l~~~------------------~g~v~~~~~ 401 (732)
+...-..+.+ ++++ .+|+... .+-.++|+++..+.|+. .+.|.++ ......+.+
T Consensus 249 ~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l 328 (462)
T 2ece_A 249 ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI 328 (462)
T ss_dssp TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence 1122223444 5543 4555444 12224565544433421 1111111 123456678
Q ss_pred ccCCcEEEEEEecCCCCceEEEEECCCCCCceEEEEe
Q 004766 402 RREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRE 438 (732)
Q Consensus 402 s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l~~ 438 (732)
|+|++.||++-. ....+..||..... ..+++..
T Consensus 329 S~DGrfLYVSnr---g~d~VavfdV~d~~-~~~lv~~ 361 (462)
T 2ece_A 329 SLDDKFLYLSLW---GIGEVRQYDISNPF-KPVLTGK 361 (462)
T ss_dssp CTTSCEEEEEET---TTTEEEEEECSSTT-SCEEEEE
T ss_pred CCCCCEEEEEeC---CCCEEEEEEecCCC-CcEEEEE
Confidence 999998876543 23688888875332 2444443
No 472
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.57 E-value=0.091 Score=53.38 Aligned_cols=206 Identities=7% Similarity=0.004 Sum_probs=119.7
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCC----Cceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED----QIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 208 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~----g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~ 208 (732)
..++.|++++++|.++ +..+ ..|+.+++++ .......... ....++++.+.++.||++-.
T Consensus 32 p~g~~~d~~~~~ly~~-D~~~---~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~----------- 96 (316)
T 1ijq_A 32 VVALDTEVASNRIYWS-DLSQ---RMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----------- 96 (316)
T ss_dssp EEEEEEETTTTEEEEE-ETTT---TEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET-----------
T ss_pred eEEEEEEeCCCEEEEE-ECCC---CcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEEC-----------
Confidence 3578899988877665 4332 3789999876 2211111011 12367888877888887632
Q ss_pred CCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 209 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 209 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
...+|.+.++.+.. ...+..... ....+++++|++.+|++..... ...|+.+++++..
T Consensus 97 -------~~~~I~~~~~~g~~--~~~~~~~~~--~~P~~iavdp~~g~ly~~d~~~---~~~I~~~~~dG~~-------- 154 (316)
T 1ijq_A 97 -------VLGTVSVADTKGVK--RKTLFRENG--SKPRAIVVDPVHGFMYWTDWGT---PAKIKKGGLNGVD-------- 154 (316)
T ss_dssp -------TTTEEEEEETTSSS--EEEEEECTT--CCEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCC--------
T ss_pred -------CCCEEEEEeCCCCc--eEEEEECCC--CCcceEEeCCCCCEEEEEccCC---CCeEEEEcCCCCC--------
Confidence 23468888876432 123333211 2335788999999887765321 2579999887621
Q ss_pred cCCCCCcEEeee-ccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC-CCCceeEEEEecCCEEEE
Q 004766 289 RDGLLPFVKLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-ERDVLESATAVNLNQMIV 365 (732)
Q Consensus 289 ~~~~~~~~~l~~-~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~l~~~~~~~~~~l~~ 365 (732)
.+.+.. ... ..-..+++++++||+.-. ...+|.++|+++.. .+.+.... ......++.+.. +.+|+
T Consensus 155 ------~~~~~~~~~~~P~gla~d~~~~~lY~~D~---~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~~-~~ly~ 223 (316)
T 1ijq_A 155 ------IYSLVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFE-DKVFW 223 (316)
T ss_dssp ------EEEEECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEET-TEEEE
T ss_pred ------eEEEEECCCCCceEEEEeccCCEEEEEEC---CCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEEC-CEEEE
Confidence 222222 111 112247888889987543 24589999998654 34444321 112345677765 78888
Q ss_pred EEecCCeeEEEEEeCCCCceeeec
Q 004766 366 SYLSDVKYVLQIRDLKNGSLLHQL 389 (732)
Q Consensus 366 ~~~~~g~~~l~~~d~~~g~~~~~l 389 (732)
+...+ .+|.+++..+|+..+.|
T Consensus 224 ~d~~~--~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 224 TDIIN--EAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EETTT--TEEEEEETTTCCCCEEE
T ss_pred EECCC--CeEEEEeCCCCcceEEE
Confidence 76444 57889987667654444
No 473
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.53 E-value=0.012 Score=57.40 Aligned_cols=192 Identities=13% Similarity=0.019 Sum_probs=107.7
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
..++.++ || .|..+....| ...|+++|+++|+.+....-.....+..-+++++.||...
T Consensus 45 tqGL~~~-~~-~LyestG~~g--~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~lt----------------- 103 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTGLNG--RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLT----------------- 103 (262)
T ss_dssp EEEEEEE-TT-EEEEEEEETT--EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEE-----------------
T ss_pred cceEEEE-CC-EEEEECCCCC--CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEE-----------------
Confidence 3578888 65 4544433333 3689999999999654321111122333556788888763
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 293 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 293 (732)
++...++.++..+......+ ..+. .+..+++||+.|+.+. + .+.|+.+|.++.+
T Consensus 104 -w~~~~v~v~D~~t~~~~~ti--~~~~-----eG~glt~dg~~L~~Sd--G---s~~i~~iDp~T~~------------- 157 (262)
T 3nol_A 104 -WKNGLGFVWNIRNLRQVRSF--NYDG-----EGWGLTHNDQYLIMSD--G---TPVLRFLDPESLT------------- 157 (262)
T ss_dssp -SSSSEEEEEETTTCCEEEEE--ECSS-----CCCCEEECSSCEEECC--S---SSEEEEECTTTCS-------------
T ss_pred -eeCCEEEEEECccCcEEEEE--ECCC-----CceEEecCCCEEEEEC--C---CCeEEEEcCCCCe-------------
Confidence 45568999998876432221 1111 1245678999876542 2 3569999988742
Q ss_pred CcEEeeec---ccc----eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEe-----ccC-----CCCCceeEEE
Q 004766 294 PFVKLIDG---FDA----QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEV-----IPE-----AERDVLESAT 356 (732)
Q Consensus 294 ~~~~l~~~---~~~----~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l-----~~~-----~~~~~l~~~~ 356 (732)
....+... ... +.. |. +| +||...-. ...|+++|.++++....+ .+. .....+.+++
T Consensus 158 v~~~I~V~~~g~~~~~lNELe-~~-~G-~lyan~w~---~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA 231 (262)
T 3nol_A 158 PVRTITVTAHGEELPELNELE-WV-DG-EIFANVWQ---TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIA 231 (262)
T ss_dssp EEEEEECEETTEECCCEEEEE-EE-TT-EEEEEETT---SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEE
T ss_pred EEEEEEeccCCccccccceeE-EE-CC-EEEEEEcc---CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEE
Confidence 01222111 110 112 33 45 67743322 237999999988621111 111 1235788999
Q ss_pred EecC-CEEEEEEecCCeeEEEEEeC
Q 004766 357 AVNL-NQMIVSYLSDVKYVLQIRDL 380 (732)
Q Consensus 357 ~~~~-~~l~~~~~~~g~~~l~~~d~ 380 (732)
+.++ ++||++...= ++|+.+.+
T Consensus 232 ~dp~~~~lfVTGK~W--p~~~ev~~ 254 (262)
T 3nol_A 232 WDKEHHRLFVTGKLW--PKVFEITL 254 (262)
T ss_dssp EETTTTEEEEEETTC--SEEEEEEE
T ss_pred EcCCCCEEEEECCCC--CceEEEEE
Confidence 9975 6677765433 56665544
No 474
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.50 E-value=0.024 Score=54.69 Aligned_cols=194 Identities=14% Similarity=0.155 Sum_probs=116.2
Q ss_pred eeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEE
Q 004766 181 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 260 (732)
Q Consensus 181 ~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~ 260 (732)
.++.|++ ..||.+.-. .....|..+++.+++..... ..+. ..+ +...+++|..|+..
T Consensus 24 qGL~~~~--~~LyestG~----------------~g~S~v~~vD~~tgkv~~~~--~l~~-~~f--geGi~~~~~~ly~l 80 (243)
T 3mbr_X 24 EGLFYLR--GHLYESTGE----------------TGRSSVRKVDLETGRILQRA--EVPP-PYF--GAGIVAWRDRLIQL 80 (243)
T ss_dssp EEEEEET--TEEEEEECC----------------TTSCEEEEEETTTCCEEEEE--ECCT-TCC--EEEEEEETTEEEEE
T ss_pred ccEEEEC--CEEEEECCC----------------CCCceEEEEECCCCCEEEEE--eCCC-Ccc--eeEEEEeCCEEEEE
Confidence 5788874 467665421 12357999999887543221 1222 122 34456678887666
Q ss_pred EecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCc
Q 004766 261 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW 340 (732)
Q Consensus 261 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~ 340 (732)
... .+.++++|.++.. ....+..+. ..+ .+++|+++||+ ++ + ..+|+.+|.++.+..
T Consensus 81 tw~----~~~v~v~D~~tl~-------------~~~ti~~~~-~Gw-glt~dg~~L~v-Sd--g-s~~l~~iDp~t~~~~ 137 (243)
T 3mbr_X 81 TWR----NHEGFVYDLATLT-------------PRARFRYPG-EGW-ALTSDDSHLYM-SD--G-TAVIRKLDPDTLQQV 137 (243)
T ss_dssp ESS----SSEEEEEETTTTE-------------EEEEEECSS-CCC-EEEECSSCEEE-EC--S-SSEEEEECTTTCCEE
T ss_pred Eee----CCEEEEEECCcCc-------------EEEEEeCCC-Cce-EEeeCCCEEEE-EC--C-CCeEEEEeCCCCeEE
Confidence 432 3579999988742 122222221 223 25678888775 55 2 347999999887622
Q ss_pred eEeccCC---CCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeecccc------------c-ceeeEeecccC
Q 004766 341 FEVIPEA---ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE------------I-GSVNAISARRE 404 (732)
Q Consensus 341 ~~l~~~~---~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~------------~-g~v~~~~~s~d 404 (732)
..+--.. +-..+..+.+.+ +.+++..... ..|.++|+++|+.+..|.+. . ....+++.+++
T Consensus 138 ~~I~V~~~g~~~~~lNeLe~~~-G~lyanvw~s--~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 138 GSIKVTAGGRPLDNLNELEWVN-GELLANVWLT--SRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp EEEECEETTEECCCEEEEEEET-TEEEEEETTT--TEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT
T ss_pred EEEEEccCCcccccceeeEEeC-CEEEEEECCC--CeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC
Confidence 2221111 113455677776 7888666433 48999999999987777642 1 23467788888
Q ss_pred CcEEEEEEecCCCCceEEEEEC
Q 004766 405 DSVVFISFTSFLIPGIVYQCNL 426 (732)
Q Consensus 405 ~~~l~~~~ss~~~p~~~y~~d~ 426 (732)
+++++++---| +.+|.+.+
T Consensus 215 ~~~lfVTGK~w---p~~~~v~~ 233 (243)
T 3mbr_X 215 HDRLFVTGKRW---PMLYEIRL 233 (243)
T ss_dssp TTEEEEEETTC---SEEEEEEE
T ss_pred CCEEEEECCCC---CcEEEEEE
Confidence 88888765554 56776654
No 475
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.47 E-value=0.026 Score=54.46 Aligned_cols=194 Identities=13% Similarity=0.025 Sum_probs=107.1
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
.++.+++ .+|..+....| ...|+++|+++|+.+....-.....+..-++++++||...
T Consensus 24 qGL~~~~--~~LyestG~~g--~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~lt------------------ 81 (243)
T 3mbr_X 24 EGLFYLR--GHLYESTGETG--RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLT------------------ 81 (243)
T ss_dssp EEEEEET--TEEEEEECCTT--SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE------------------
T ss_pred ccEEEEC--CEEEEECCCCC--CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEE------------------
Confidence 5788876 45555543333 3589999999999664322111123334455678888763
Q ss_pred CcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCC
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLP 294 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 294 (732)
++...++.++..+...... +..+. . +..+++||+.|+.+ ++ ...|+++|.++.. .
T Consensus 82 w~~~~v~v~D~~tl~~~~t--i~~~~-~----Gwglt~dg~~L~vS--dg---s~~l~~iDp~t~~-------------~ 136 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTPRAR--FRYPG-E----GWALTSDDSHLYMS--DG---TAVIRKLDPDTLQ-------------Q 136 (243)
T ss_dssp SSSSEEEEEETTTTEEEEE--EECSS-C----CCEEEECSSCEEEE--CS---SSEEEEECTTTCC-------------E
T ss_pred eeCCEEEEEECCcCcEEEE--EeCCC-C----ceEEeeCCCEEEEE--CC---CCeEEEEeCCCCe-------------E
Confidence 4556899999877542221 12121 1 23556899887654 23 2569999988742 0
Q ss_pred cEEeeecccc----eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCce--E---eccC------CCCCceeEEEEec
Q 004766 295 FVKLIDGFDA----QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWF--E---VIPE------AERDVLESATAVN 359 (732)
Q Consensus 295 ~~~l~~~~~~----~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~--~---l~~~------~~~~~l~~~~~~~ 359 (732)
...+....+. ...-....+.++|.-. .. ...|.++|.++++... . |.+. .....+.++++.+
T Consensus 137 ~~~I~V~~~g~~~~~lNeLe~~~G~lyanv-w~--s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~ 213 (243)
T 3mbr_X 137 VGSIKVTAGGRPLDNLNELEWVNGELLANV-WL--TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDA 213 (243)
T ss_dssp EEEEECEETTEECCCEEEEEEETTEEEEEE-TT--TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEET
T ss_pred EEEEEEccCCcccccceeeEEeCCEEEEEE-CC--CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcC
Confidence 1222111110 0111112244666433 22 2379999999886211 1 1111 1235789999987
Q ss_pred C-CEEEEEEecCCeeEEEEEeC
Q 004766 360 L-NQMIVSYLSDVKYVLQIRDL 380 (732)
Q Consensus 360 ~-~~l~~~~~~~g~~~l~~~d~ 380 (732)
+ ++|+++...= ++|+.+.+
T Consensus 214 ~~~~lfVTGK~w--p~~~~v~~ 233 (243)
T 3mbr_X 214 EHDRLFVTGKRW--PMLYEIRL 233 (243)
T ss_dssp TTTEEEEEETTC--SEEEEEEE
T ss_pred CCCEEEEECCCC--CcEEEEEE
Confidence 4 6777775443 56766654
No 476
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.46 E-value=0.046 Score=62.88 Aligned_cols=222 Identities=10% Similarity=-0.010 Sum_probs=122.8
Q ss_pred EEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCC--CCCeEEE
Q 004766 159 TIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQ--SEDILCW 236 (732)
Q Consensus 159 ~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~--~~~~~v~ 236 (732)
.|+.+++.++.............+++|.+.+..||++.. ...+|++.++.... .....+.
T Consensus 405 ~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~------------------~~~~I~~~~l~g~~~~~~~~~vi 466 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------------------SQRMICSTQLDRAHGVSSYDTVI 466 (791)
T ss_dssp SEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEET------------------TTTEEEEEEC--------CEEEE
T ss_pred ceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeec------------------cceeEEEEeccCCCCCcceeEEE
Confidence 577788876653221111112367899988888888742 23468888886431 1223444
Q ss_pred ecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-cccce-EEEEEecCC
Q 004766 237 KDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDAQ-YEVIANDDT 314 (732)
Q Consensus 237 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~-~~~~s~dg~ 314 (732)
.... ....++++.+.++.|++.... ...|+++++++.. .+.+.. ..... -.++.|.++
T Consensus 467 ~~~l--~~P~GLAvD~~~~~LY~tD~~----~~~I~v~~ldG~~--------------~~~l~~~~l~~P~gIaVDp~~g 526 (791)
T 3m0c_C 467 SRDI--QAPDGLAVDWIHSNIYWTDSV----LGTVSVADTKGVK--------------RKTLFRENGSKPRAIVVDPVHG 526 (791)
T ss_dssp CSSC--SCCCEEEEETTTTEEEEEETT----TTEEEEEETTSSS--------------EEEEEECTTCCEEEEEEETTTT
T ss_pred ecCC--CCcceeeeeecCCcEEEEecC----CCeEEEEeCCCCe--------------EEEEEeCCCCCcceEEEecCCC
Confidence 3211 122468888899988776432 3579999988632 233332 22211 124677777
Q ss_pred eEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCEEEEEEecCCeeEEEEEeCCCCceeeeccccc
Q 004766 315 VFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEI 393 (732)
Q Consensus 315 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~ 393 (732)
.||+. +.+ ...+|.++++++.. .+.++... -..-.++.+.. +++||++-... ..|++++++ |...+.+....
T Consensus 527 ~LYwt-D~g-~~~~I~~~~~dG~~-~~~lv~~~-l~~P~GLavD~~~~~LYwaD~~~--~~I~~~d~d-G~~~~~v~~~~ 599 (791)
T 3m0c_C 527 FMYWT-DWG-TPAKIKKGGLNGVD-IYSLVTEN-IQWPNGITLDLLSGRLYWVDSKL--HSISSIDVN-GGNRKTILEDE 599 (791)
T ss_dssp EEEEE-ECS-SSCEEEEEETTSCC-EEEEECSS-CSCEEEEEEETTTTEEEEEETTT--TEEEEEETT-SCSCEEEEECT
T ss_pred CEEEe-cCC-CCCeEEEEecCCCc-eEEEEeCC-CCCceEEEEecCCCeEEEEeCCC--CcEEEEecC-CCceEEEecCC
Confidence 77764 332 23579999998765 45555433 23456788873 47888875443 689999997 65433432111
Q ss_pred ---ceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 394 ---GSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 394 ---g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
....+++. +++.||++- ..-..|+++|..+|+
T Consensus 600 ~~l~~P~glav--~~~~lYwtD---~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 600 KRLAHPFSLAV--FEDKVFWTD---IINEAIFSANRLTGS 634 (791)
T ss_dssp TTTSSEEEEEE--ETTEEEEEE---TTTTEEEEEETTTCC
T ss_pred CccCCCCEEEE--eCCEEEEEE---CCCCEEEEEeCCCCc
Confidence 11112332 344555432 223567777765554
No 477
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.46 E-value=0.032 Score=56.81 Aligned_cols=240 Identities=12% Similarity=0.073 Sum_probs=125.2
Q ss_pred eEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc--------------------cceeeeeEEEEeCCcEEEEE
Q 004766 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL--------------------SWFKFSSIAWTHDSKGFFYS 195 (732)
Q Consensus 136 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~--------------------~~~~~~~~~WspDg~~l~y~ 195 (732)
++.|+|+|+.+ |+.. .+ ..|+.+|..+++...... ......++++.+++..|+++
T Consensus 23 ~i~~d~~g~~l-~v~~-~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 23 SFTFDSTNKGF-YTSV-QD---GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp CEECCTTCSSE-EEEC-TT---SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred EEEEcCCCCEE-EEEc-CC---CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 67889998733 3322 22 368888887765321100 00123578888733456665
Q ss_pred EecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecCCC--CeeEEEeEEec-CCcEEEEEEecC--------
Q 004766 196 RYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEH--PKYIFSGHVTE-DGQYLVMCIEEN-------- 264 (732)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~--~~~~~~~~~Sp-Dg~~l~~~~~~~-------- 264 (732)
.. ...|++++..++.. ..+...... .....++++++ ||+ |++.....
T Consensus 98 d~-------------------~~~i~~~d~~~g~~--~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 98 DC-------------------YYHLSVVGSEGGHA--TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp ET-------------------TTEEEEECTTCEEC--EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHH
T ss_pred EC-------------------CCCEEEEeCCCCEE--EEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccc
Confidence 31 12366666543321 122211111 11345788999 885 44443211
Q ss_pred -----CcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeeccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCC
Q 004766 265 -----CDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 338 (732)
Q Consensus 265 -----~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 338 (732)
......|+.++..++. ...+..... ..-..+++||+.||+.-.. +.+|+++++++..
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~--------------~~~~~~~~~~p~gia~~~dg~~lyv~d~~---~~~I~~~~~~~~~ 218 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKE--------------TTLLLKELHVPGGAEVSADSSFVLVAEFL---SHQIVKYWLEGPK 218 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTE--------------EEEEEEEESCCCEEEECTTSSEEEEEEGG---GTEEEEEESSSTT
T ss_pred eehcccCCCceEEEEeCCCCE--------------EEEeccCCccCcceEECCCCCEEEEEeCC---CCeEEEEECCCCc
Confidence 0123679999876532 222222211 1122588998888875332 4579999987632
Q ss_pred --CceEeccCCCCCceeEEEEecCCEEEEEEec--------CCeeEEEEEeCCCCceeeecccccc----eeeEeecccC
Q 004766 339 --DWFEVIPEAERDVLESATAVNLNQMIVSYLS--------DVKYVLQIRDLKNGSLLHQLPIEIG----SVNAISARRE 404 (732)
Q Consensus 339 --~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~--------~g~~~l~~~d~~~g~~~~~l~~~~g----~v~~~~~s~d 404 (732)
..+.+.. .+ . ..++.+.+++.+++.... .....|.++|.+ |+.++.+..+.+ .+..+.. +
T Consensus 219 ~~~~~~~~~-~~-g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~--~ 292 (322)
T 2fp8_A 219 KGTAEVLVK-IP-N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE--H 292 (322)
T ss_dssp TTCEEEEEE-CS-S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE--E
T ss_pred CCccceEEe-CC-C-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE--e
Confidence 2233322 21 2 566777776677777654 224679999986 876666665532 2222322 3
Q ss_pred CcEEEEEEecCCCCceEEEEECCC
Q 004766 405 DSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 405 ~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
+++|+++- .....+.++++..
T Consensus 293 ~g~L~v~~---~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 293 DGLLYIGT---LFHGSVGILVYDK 313 (322)
T ss_dssp TTEEEEEC---SSCSEEEEEEC--
T ss_pred CCEEEEee---cCCCceEEEeccc
Confidence 45566542 2234677777643
No 478
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.45 E-value=0.01 Score=60.79 Aligned_cols=160 Identities=9% Similarity=0.031 Sum_probs=94.7
Q ss_pred eEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeeec-cc-ceEEEEEecCCeEEEEeC
Q 004766 244 YIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG-FD-AQYEVIANDDTVFTFLTN 321 (732)
Q Consensus 244 ~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~s~dg~~l~~~s~ 321 (732)
...+++|+|||+ |++.... ...|+++|.+++. ...+... .. .....++++|+ +++.+.
T Consensus 46 ~~~~~~~~~~g~-l~~~~~~----~~~i~~~d~~~~~--------------~~~~~~~~~~~~~~i~~~~dg~-l~v~~~ 105 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLLDVF----EGNIFKINPETKE--------------IKRPFVSHKANPAAIKIHKDGR-LFVCYL 105 (333)
T ss_dssp CEEEEEECTTSC-EEEEETT----TCEEEEECTTTCC--------------EEEEEECSSSSEEEEEECTTSC-EEEEEC
T ss_pred cccCcEECCCCC-EEEEECC----CCEEEEEeCCCCc--------------EEEEeeCCCCCcceEEECCCCc-EEEEeC
Confidence 446889999998 4443321 2469999987643 2222211 11 11224778875 555543
Q ss_pred CC-CCCceEEEEeCCCCCCceEecc-CCCCCceeEEEEecCCEEEEEEecC----CeeEEEEEeCCCCceeeecccccce
Q 004766 322 KD-APKYKIIRVDLKEPNDWFEVIP-EAERDVLESATAVNLNQMIVSYLSD----VKYVLQIRDLKNGSLLHQLPIEIGS 395 (732)
Q Consensus 322 ~~-~~~~~l~~~d~~~~~~~~~l~~-~~~~~~l~~~~~~~~~~l~~~~~~~----g~~~l~~~d~~~g~~~~~l~~~~g~ 395 (732)
.+ .....|+++|.+++. ...++. ......+.++.+.+++.+++....+ ....|++++.++++. ..+......
T Consensus 106 ~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~ 183 (333)
T 2dg1_A 106 GDFKSTGGIFAATENGDN-LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-TPIIQNISV 183 (333)
T ss_dssp TTSSSCCEEEEECTTSCS-CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-EEEEEEESS
T ss_pred CCCCCCceEEEEeCCCCE-EEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE-EEeecCCCc
Confidence 22 112479999988776 343333 2223457778888767787766431 236899999875554 343322223
Q ss_pred eeEeecccCCcEEEEEEecCCCCceEEEEECCC
Q 004766 396 VNAISARREDSVVFISFTSFLIPGIVYQCNLKT 428 (732)
Q Consensus 396 v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~ 428 (732)
...+.++++++.++++-+. -..++++|+.+
T Consensus 184 ~~~i~~~~dg~~l~v~~~~---~~~i~~~d~~~ 213 (333)
T 2dg1_A 184 ANGIALSTDEKVLWVTETT---ANRLHRIALED 213 (333)
T ss_dssp EEEEEECTTSSEEEEEEGG---GTEEEEEEECT
T ss_pred ccceEECCCCCEEEEEeCC---CCeEEEEEecC
Confidence 4567788999877765432 35789999853
No 479
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.44 E-value=0.11 Score=51.48 Aligned_cols=231 Identities=10% Similarity=0.042 Sum_probs=123.8
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc--cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL--SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 211 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~ 211 (732)
+..+.++|||+.. ++ +..+ ..|+.+|.+ |+...... ......+++++|||+ |+++..
T Consensus 59 ~~~i~~~~~g~l~-v~-~~~~---~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~-------------- 117 (299)
T 2z2n_A 59 VMCLTISSDGEVW-FT-ENAA---NKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGD-IWFTEM-------------- 117 (299)
T ss_dssp EEEEEECTTSCEE-EE-ETTT---TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEET--------------
T ss_pred eeeEEECCCCCEE-Ee-CCCC---CeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCC-EEEEec--------------
Confidence 5678899999843 33 2222 268888876 44221111 112246788888885 555431
Q ss_pred ccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCC
Q 004766 212 TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 212 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
....|++++. ++.. ..+..+........+.++++|+.. +... . ...|+.++. ++.
T Consensus 118 ----~~~~i~~~d~-~g~~---~~~~~~~~~~~~~~i~~~~~g~l~-v~~~-~---~~~i~~~~~-~g~----------- 172 (299)
T 2z2n_A 118 ----NGNRIGRITD-DGKI---REYELPNKGSYPSFITLGSDNALW-FTEN-Q---NNAIGRITE-SGD----------- 172 (299)
T ss_dssp ----TTTEEEEECT-TCCE---EEEECSSTTCCEEEEEECTTSCEE-EEET-T---TTEEEEECT-TCC-----------
T ss_pred ----CCceEEEECC-CCCE---EEecCCCCCCCCceEEEcCCCCEE-EEeC-C---CCEEEEEcC-CCc-----------
Confidence 2346777776 3321 222222222344678899999643 3321 1 245888887 432
Q ss_pred CCCcEEe--eecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 292 LLPFVKL--IDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 292 ~~~~~~l--~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
.... ........ ..++++|. +|+.... ...|++++. ++. ...+........+.++.+.+++.+++...
T Consensus 173 ---~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~---~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 173 ---ITEFKIPTPASGPVGITKGNDDA-LWFVEII---GNKIGRITT-SGE-ITEFKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp ---EEEEECSSTTCCEEEEEECTTSS-EEEEETT---TTEEEEECT-TCC-EEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred ---EEEeeCCCCCCcceeEEECCCCC-EEEEccC---CceEEEECC-CCc-EEEEECCCCCCCceeEEECCCCCEEEecc
Confidence 1111 11111111 23566665 6665432 347999998 554 34332222234567788877667777654
Q ss_pred cCCeeEEEEEeCCCCceeeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCC
Q 004766 369 SDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 429 (732)
Q Consensus 369 ~~g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~ 429 (732)
.+ ..|++++.+ |+. ..+..+ ...+..+.. +++ .++++.+ ...++++++.++
T Consensus 244 ~~--~~i~~~d~~-g~~-~~~~~~~~~~~~~~i~~-~~g-~l~v~~~----~~~l~~~~~~~~ 296 (299)
T 2z2n_A 244 GA--NKIGRLTSN-NII-EEYPIQIKSAEPHGICF-DGE-TIWFAME----CDKIGKLTLIKD 296 (299)
T ss_dssp TT--TEEEEEETT-TEE-EEEECSSSSCCEEEEEE-CSS-CEEEEET----TTEEEEEEEC--
T ss_pred CC--ceEEEECCC-Cce-EEEeCCCCCCccceEEe-cCC-CEEEEec----CCcEEEEEcCcc
Confidence 43 478899984 654 444333 234555666 555 4666532 257888887655
No 480
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=97.42 E-value=0.00076 Score=65.56 Aligned_cols=144 Identities=13% Similarity=0.055 Sum_probs=86.1
Q ss_pred EEEEEEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCC-Cc---------C-------hhHHHHHHhcCcEE
Q 004766 452 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP-SF---------S-------VSRTILMRHLGAVF 514 (732)
Q Consensus 452 ~~~~~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~-~~---------~-------~~~~~~l~~~G~~v 514 (732)
..+.+....| ..+..|++..+. .....|++|+++||||.+... .+ . ..-..| . +-..+
T Consensus 22 Gy~~v~~~~~-~~lFywf~es~~--~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW-~-~~anv 96 (255)
T 1whs_A 22 GYITVDEGAG-RSLFYLLQEAPE--DAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRW-N-KVANV 96 (255)
T ss_dssp EEEEEETTTT-EEEEEEEECCCG--GGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCG-G-GTSEE
T ss_pred EEEECCCCCC-cEEEEEEEEecC--CCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccc-c-ccCCE
Confidence 3455554467 788888775543 235789999999999987544 21 0 000122 2 34678
Q ss_pred EEEcccCCCCCchhHHhccc-ccCCccHHHHHHHHHHHHHH-cCCCCCCcEEEEecChhHHHHHHHHhh----C--CCee
Q 004766 515 CIANIRGGGEYGEEWHKGGA-LAKKQNCFDDFISASEYLIS-AGYTQSRKLCIEGGSNGGLLVGACINQ----R--PDLF 586 (732)
Q Consensus 515 ~~~~~rG~g~~g~~~~~~~~-~~~~~~~~~D~~~~~~~l~~-~~~~d~~~i~i~G~S~GG~l~~~~~~~----~--p~~f 586 (732)
+.+|.+-|.||...-..... ........+|+...++...+ ......+++.|.|.|+||..+..++.. . .=.+
T Consensus 97 lfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inL 176 (255)
T 1whs_A 97 LFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINL 176 (255)
T ss_dssp EEECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEE
T ss_pred EEEecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCccccc
Confidence 88896544444322111111 11222345666666554333 333345689999999999988776652 1 2357
Q ss_pred eEEEEcCCcccccc
Q 004766 587 GCALAHVGVMDMLR 600 (732)
Q Consensus 587 ~a~v~~~p~~d~~~ 600 (732)
+++++..|++|...
T Consensus 177 kGi~ign~~~d~~~ 190 (255)
T 1whs_A 177 KGFMVGNGLIDDYH 190 (255)
T ss_dssp EEEEEEEECCBHHH
T ss_pred ceEEecCCccCHHH
Confidence 89999999888754
No 481
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.39 E-value=0.12 Score=59.46 Aligned_cols=204 Identities=7% Similarity=0.025 Sum_probs=119.6
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCC----ce---ecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQ----IV---EADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 206 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g----~~---~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~ 206 (732)
..++.+++.+.+|.++ +... ..|+.+++.+. .. +...+. ...+++..+.++.||++-
T Consensus 426 ~~gl~~d~~~~~lY~s-D~~~---~~I~~~~l~g~~~~~~~~~vi~~~l~--~P~GLAvD~~~~~LY~tD---------- 489 (791)
T 3m0c_C 426 VVALDTEVASNRIYWS-DLSQ---RMICSTQLDRAHGVSSYDTVISRDIQ--APDGLAVDWIHSNIYWTD---------- 489 (791)
T ss_dssp EEEEEEETTTTEEEEE-ETTT---TEEEEEEC--------CEEEECSSCS--CCCEEEEETTTTEEEEEE----------
T ss_pred eEEEeecccCCeeEEe-eccc---eeEEEEeccCCCCCcceeEEEecCCC--CcceeeeeecCCcEEEEe----------
Confidence 3477888877776555 4332 26888888753 11 111111 236788888888888873
Q ss_pred CCCCcccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 207 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 207 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
....+|++.++.+.. ...+..... ....++++.|.+.+|+++.... ...|+++++++..
T Consensus 490 --------~~~~~I~v~~ldG~~--~~~l~~~~l--~~P~gIaVDp~~g~LYwtD~g~---~~~I~~~~~dG~~------ 548 (791)
T 3m0c_C 490 --------SVLGTVSVADTKGVK--RKTLFRENG--SKPRAIVVDPVHGFMYWTDWGT---PAKIKKGGLNGVD------ 548 (791)
T ss_dssp --------TTTTEEEEEETTSSS--EEEEEECTT--CCEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCC------
T ss_pred --------cCCCeEEEEeCCCCe--EEEEEeCCC--CCcceEEEecCCCCEEEecCCC---CCeEEEEecCCCc------
Confidence 233478888887543 223333221 1235789999999988765322 2579999988632
Q ss_pred cccCCCCCcEEeee-cccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCC-CCceeEEEEecCCEE
Q 004766 287 KKRDGLLPFVKLID-GFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE-RDVLESATAVNLNQM 363 (732)
Q Consensus 287 ~~~~~~~~~~~l~~-~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~l~~~~~~~~~~l 363 (732)
.+.+.. +... .-..+++.+++||+. + ....+|.++++++.. .+.++.... -..-.++.++. ++|
T Consensus 549 --------~~~lv~~~l~~P~GLavD~~~~~LYwa-D--~~~~~I~~~d~dG~~-~~~v~~~~~~l~~P~glav~~-~~l 615 (791)
T 3m0c_C 549 --------IYSLVTENIQWPNGITLDLLSGRLYWV-D--SKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFE-DKV 615 (791)
T ss_dssp --------EEEEECSSCSCEEEEEEETTTTEEEEE-E--TTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEET-TEE
T ss_pred --------eEEEEeCCCCCceEEEEecCCCeEEEE-e--CCCCcEEEEecCCCc-eEEEecCCCccCCCCEEEEeC-CEE
Confidence 223332 1111 112466778888875 3 234589999998765 445544321 12233566666 788
Q ss_pred EEEEecCCeeEEEEEeCCCCceeeec
Q 004766 364 IVSYLSDVKYVLQIRDLKNGSLLHQL 389 (732)
Q Consensus 364 ~~~~~~~g~~~l~~~d~~~g~~~~~l 389 (732)
|++.... ..|++++..+|+.+..|
T Consensus 616 YwtD~~~--~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 616 FWTDIIN--EAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEETTT--TEEEEEETTTCCCCEEE
T ss_pred EEEECCC--CEEEEEeCCCCcceEEe
Confidence 8876554 57888987778654444
No 482
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.29 E-value=0.06 Score=57.43 Aligned_cols=158 Identities=12% Similarity=0.045 Sum_probs=87.3
Q ss_pred EeEEECC-CCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCccc
Q 004766 135 IKVSVSE-DAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 213 (732)
Q Consensus 135 ~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~ 213 (732)
..++++| ++.. +|+.+.. ..|+++|++++.............+++|++||+.||++.....
T Consensus 140 ~~lavdp~~~g~-Lyv~d~~----~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~------------- 201 (430)
T 3tc9_A 140 VWLSFDPKNHNH-LYLVGEQ----HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNN------------- 201 (430)
T ss_dssp CEEEEETTEEEE-EEEEEBT----EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSC-------------
T ss_pred CEEEECCCCCCe-EEEEeCC----CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCC-------------
Confidence 4778998 4555 4555543 5899999998774332222223478999999998887743220
Q ss_pred CCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCC
Q 004766 214 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 293 (732)
Q Consensus 214 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 293 (732)
.....++.............+. ....+ .+++++|++.+|++.... ..+|+.++.+++.
T Consensus 202 -~~~~~v~~~~~~g~~~~~~~l~-~~~~p---~giavdp~~g~lyv~d~~----~~~V~~~~~~~~~------------- 259 (430)
T 3tc9_A 202 -NDRPNNYILTRESGFKVITELT-KGQNC---NGAETHPINGELYFNSWN----AGQVFRYDFTTQE------------- 259 (430)
T ss_dssp -TTSEEEEEEEGGGTSCSEEEEE-ECSSC---CCEEECTTTCCEEEEETT----TTEEEEEETTTTE-------------
T ss_pred -cccceEEEEeCCCceeeeeeec-cCCCc---eEEEEeCCCCEEEEEECC----CCEEEEEECCCCc-------------
Confidence 1112344444332221111222 11222 367889965566555432 3469999987632
Q ss_pred CcEEeee--c-ccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCC
Q 004766 294 PFVKLID--G-FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE 336 (732)
Q Consensus 294 ~~~~l~~--~-~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 336 (732)
...+.. . .......++|+|+.||+.... +.+|++++.++
T Consensus 260 -~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~---~~~I~~~~~d~ 301 (430)
T 3tc9_A 260 -TTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN---QHYILRSDYDW 301 (430)
T ss_dssp -EEEEEECSSSSCCEEEEECTTSSEEEEEETT---TTEEEEEEEET
T ss_pred -EEEEEEcCCCCcceeEEEcCCCCEEEEEECC---CCEEEEEeCCc
Confidence 111211 1 112234589999888875432 45788877654
No 483
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.28 E-value=0.078 Score=54.14 Aligned_cols=201 Identities=8% Similarity=0.005 Sum_probs=106.2
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCc-ee-ccc---------ccceeeeeEEEEeCCcEEEEEEecCCCC
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI-VE-ADA---------LSWFKFSSIAWTHDSKGFFYSRYPAPKE 202 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~-~~-~~~---------~~~~~~~~~~WspDg~~l~y~~~~~~~~ 202 (732)
..+++++|||+ .|+.+... ..|+++|.++.. .+ ... ..-....+++++|++..||++..
T Consensus 93 p~gia~d~~g~--l~v~d~~~---~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~----- 162 (329)
T 3fvz_A 93 PHGLSIDTDGN--YWVTDVAL---HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG----- 162 (329)
T ss_dssp EEEEEECTTSC--EEEEETTT---TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC-----
T ss_pred ceEEEECCCCC--EEEEECCC---CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC-----
Confidence 56789999999 34444332 379999987652 11 110 00002367999994445666531
Q ss_pred CCCCCCCCcccCCcccEEEEEECCCCCCCCeEEEecC-C-------CCeeEEEeEEecCCcEEEEEEecCCcceEEEEEE
Q 004766 203 GKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDP-E-------HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYC 274 (732)
Q Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~-~-------~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~ 274 (732)
....+|++++.... -+..+... . .-....+++++||+..|++.... ...|.++
T Consensus 163 ------------~~~~~I~~~~~~g~---~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~----~~~I~~~ 223 (329)
T 3fvz_A 163 ------------YCNSRIVQFSPSGK---FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE----NGRIQCF 223 (329)
T ss_dssp ------------SSCCEEEEECTTSC---EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT----TTEEEEE
T ss_pred ------------CCCCeEEEEcCCCC---EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC----CCEEEEE
Confidence 12346777773221 11222111 0 00124578999997776655422 3568888
Q ss_pred eCCCCCCCcccccccCCCCCcEEeeec-cc-ceE-EEEEecCCeEEEEeCC----CCCCceEEEEeCCCCCCceEeccC-
Q 004766 275 DLSALPEGLEGFKKRDGLLPFVKLIDG-FD-AQY-EVIANDDTVFTFLTNK----DAPKYKIIRVDLKEPNDWFEVIPE- 346 (732)
Q Consensus 275 d~~~~~~~~~~~~~~~~~~~~~~l~~~-~~-~~~-~~~s~dg~~l~~~s~~----~~~~~~l~~~d~~~~~~~~~l~~~- 346 (732)
+.+++.. ...+... .. ..+ ..++| ..++..... +....+++.+++.+++ ....+..
T Consensus 224 ~~~~G~~-------------~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~-~~~~~~~~ 287 (329)
T 3fvz_A 224 KTDTKEF-------------VREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGE-IIDVFKPV 287 (329)
T ss_dssp ETTTCCE-------------EEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCC-EEEEECCS
T ss_pred ECCCCcE-------------EEEEeccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCe-EEEEEcCC
Confidence 9874320 1112111 11 111 12455 223322211 1224578899988776 3333321
Q ss_pred -CCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCC
Q 004766 347 -AERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLK 381 (732)
Q Consensus 347 -~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~ 381 (732)
.......++.+++++.+|++...+ .+|++|+++
T Consensus 288 ~~~~~~p~~ia~~~dG~lyvad~~~--~~I~~~~~~ 321 (329)
T 3fvz_A 288 RKHFDMPHDIVASEDGTVYIGDAHT--NTVWKFTLT 321 (329)
T ss_dssp SSCCSSEEEEEECTTSEEEEEESSS--CCEEEEEEE
T ss_pred CCccCCeeEEEECCCCCEEEEECCC--CEEEEEeCC
Confidence 112346778888877788776655 478888875
No 484
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.28 E-value=0.0064 Score=65.22 Aligned_cols=169 Identities=9% Similarity=-0.008 Sum_probs=94.6
Q ss_pred EEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEee--ecccceE--EEEEec-CCeEEEE
Q 004766 245 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI--DGFDAQY--EVIAND-DTVFTFL 319 (732)
Q Consensus 245 ~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~--~~~s~d-g~~l~~~ 319 (732)
+..++|||||++|++....+ .....+.++|+.++..+.. ....++..+. .+....+ ..|+|+ +..|+..
T Consensus 95 v~~l~~spdg~~lav~~~sg-s~d~~v~iwd~~~~~~~~~-----~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSS-EYGSIIAFFDVRTFSNEAK-----QQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp EEEEEECTTSCEEEEEEEET-TTEEEEEEEEHHHHHCTTC-----SSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred ccEEEEcCCCCEEEEEEecc-CCCceEEEEEccccccCCc-----CCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 56889999999998643111 1246688888765210000 0001111111 1111222 258897 4444433
Q ss_pred eCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCCeeEEEEEeCCCCceeeeccccc------
Q 004766 320 TNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEI------ 393 (732)
Q Consensus 320 s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~------ 393 (732)
+. +..|..+|+.++........+. ..+..+.|++++..++....++ .|++||.. ++....+..+.
T Consensus 169 s~----Dg~v~iwD~~~~~~~~~~~~~~--~~v~~v~wspdg~~lasgs~dg--~v~iwd~~-~~~~~~~~~~~~~~~~~ 239 (434)
T 2oit_A 169 LA----DGSIAVLQVTETVKVCATLPST--VAVTSVCWSPKGKQLAVGKQNG--TVVQYLPT-LQEKKVIPCPPFYESDH 239 (434)
T ss_dssp ET----TSCEEEEEESSSEEEEEEECGG--GCEEEEEECTTSSCEEEEETTS--CEEEECTT-CCEEEEECCCTTCCTTS
T ss_pred EC----CCeEEEEEcCCCcceeeccCCC--CceeEEEEcCCCCEEEEEcCCC--cEEEEccC-CcccccccCCcccCCCC
Confidence 33 2358888887764222222332 5688899998766666777774 68899987 66544554331
Q ss_pred -ceeeEeecccCCcEEEEEEecC----CCCceEEEEECCCC
Q 004766 394 -GSVNAISARREDSVVFISFTSF----LIPGIVYQCNLKTE 429 (732)
Q Consensus 394 -g~v~~~~~s~d~~~l~~~~ss~----~~p~~~y~~d~~~~ 429 (732)
..+..+.+++++. +++.+++. ..++.++.+++...
T Consensus 240 ~~~v~~v~w~~~~~-~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 240 PVRVLDVLWIGTYV-FAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CEEEEEEEEEETTE-EEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ceeEEEEEEecCce-EEEEEccCCCccCCCCceEEEEeccC
Confidence 2566777777654 44444433 34566888887654
No 485
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.28 E-value=0.26 Score=55.21 Aligned_cols=202 Identities=8% Similarity=-0.067 Sum_probs=123.2
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
..++.|++++.+|.++ +... ..|+.++++++........+ ....+++..+.++.||++-.
T Consensus 39 ~~~l~~d~~~~~lywt-D~~~---~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~--------------- 99 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWT-DISL---KTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADT--------------- 99 (628)
T ss_dssp EEEEEEETTTTEEEEE-ETTT---TEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET---------------
T ss_pred eEEEEEECCCCEEEEE-ECCC---CeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEEC---------------
Confidence 4578899988877665 4332 37888998876432111111 12357888778888888631
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
...+|.+.++.+.. ...+....- ..-.++++.|...+|+++.. +. ...|+.+++++..
T Consensus 100 ---~~~~I~v~~~dG~~--~~~l~~~~l--~~P~~iavdp~~G~lY~tD~-g~--~~~I~r~~~dG~~------------ 157 (628)
T 4a0p_A 100 ---GTNRIEVSKLDGQH--RQVLVWKDL--DSPRALALDPAEGFMYWTEW-GG--KPKIDRAAMDGSE------------ 157 (628)
T ss_dssp ---TTTEEEEEETTSTT--CEEEECSSC--CCEEEEEEETTTTEEEEEEC-SS--SCEEEEEETTSCS------------
T ss_pred ---CCCEEEEEecCCCc--EEEEEeCCC--CCcccEEEccCCCeEEEeCC-CC--CCEEEEEeCCCCc------------
Confidence 23578888886543 223332211 12357899998888877653 22 4679999988732
Q ss_pred CCcEEeeecccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC
Q 004766 293 LPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 371 (732)
Q Consensus 293 ~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g 371 (732)
.+.+..+..... ..+++++++||+.-. ...+|.++++++.. .+ ++.... ....+++++. +++|++...+
T Consensus 158 --~~~l~~~~~~P~GlalD~~~~~LY~aD~---~~~~I~~~d~dG~~-~~-v~~~~l-~~P~glav~~-~~ly~tD~~~- 227 (628)
T 4a0p_A 158 --RTTLVPNVGRANGLTIDYAKRRLYWTDL---DTNLIESSNMLGLN-RE-VIADDL-PHPFGLTQYQ-DYIYWTDWSR- 227 (628)
T ss_dssp --CEEEECSCSSEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS-CE-EEEECC-SCEEEEEEET-TEEEEEETTT-
T ss_pred --eEEEECCCCCcceEEEccccCEEEEEEC---CCCEEEEEcCCCCc-eE-EeeccC-CCceEEEEEC-CEEEEecCCC-
Confidence 333443322111 247777888887543 24579999998765 33 443322 2344677776 7888886544
Q ss_pred eeEEEEEeCCCCceee
Q 004766 372 KYVLQIRDLKNGSLLH 387 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~ 387 (732)
..|+++|..+|+..+
T Consensus 228 -~~I~~~dk~tg~~~~ 242 (628)
T 4a0p_A 228 -RSIERANKTSGQNRT 242 (628)
T ss_dssp -TEEEEEETTTCCSCE
T ss_pred -CEEEEEECCCCCceE
Confidence 578899977776433
No 486
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.23 E-value=0.072 Score=52.85 Aligned_cols=195 Identities=7% Similarity=0.009 Sum_probs=103.3
Q ss_pred EEeEEE-CCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-c-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 134 LIKVSV-SEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-L-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 134 ~~~~~~-SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
...+.+ +++|+.+ ++ +..+. ..|+++|. +|+.+... . ......+++++|||+ |+++..
T Consensus 79 p~~i~~~~~~g~l~-v~-~~~~~--~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~------------- 139 (286)
T 1q7f_A 79 PNRVAVVRNSGDII-VT-ERSPT--HQIQIYNQ-YGQFVRKFGATILQHPRGVTVDNKGR-IIVVEC------------- 139 (286)
T ss_dssp EEEEEEETTTTEEE-EE-ECGGG--CEEEEECT-TSCEEEEECTTTCSCEEEEEECTTSC-EEEEET-------------
T ss_pred ceEEEEEcCCCeEE-EE-cCCCC--CEEEEECC-CCcEEEEecCccCCCceEEEEeCCCC-EEEEEC-------------
Confidence 557778 5777633 33 22212 47899994 55543211 1 111236789999996 555421
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
....|++++.... .+..+..........+++++|||+ |++.. .. ...|++++..+..
T Consensus 140 -----~~~~i~~~~~~g~---~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~-~~---~~~i~~~~~~g~~---------- 196 (286)
T 1q7f_A 140 -----KVMRVIIFDQNGN---VLHKFGCSKHLEFPNGVVVNDKQE-IFISD-NR---AHCVKVFNYEGQY---------- 196 (286)
T ss_dssp -----TTTEEEEECTTSC---EEEEEECTTTCSSEEEEEECSSSE-EEEEE-GG---GTEEEEEETTCCE----------
T ss_pred -----CCCEEEEEcCCCC---EEEEeCCCCccCCcEEEEECCCCC-EEEEE-CC---CCEEEEEcCCCCE----------
Confidence 2346788775321 122232212222356889999998 43332 21 3468888875421
Q ss_pred CCCCcEEeeec--cc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEE
Q 004766 291 GLLPFVKLIDG--FD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSY 367 (732)
Q Consensus 291 ~~~~~~~l~~~--~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~ 367 (732)
...+... .. ..-..++++| .+|+....+ +.+|.+++.++.. ...+..+.......++.+.+++.++++.
T Consensus 197 ----~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~--~~~i~~~~~~g~~-~~~~~~~~~~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 197 ----LRQIGGEGITNYPIGVGINSNG-EILIADNHN--NFNLTIFTQDGQL-ISALESKVKHAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp ----EEEESCTTTSCSEEEEEECTTC-CEEEEECSS--SCEEEEECTTSCE-EEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred ----EEEEccCCccCCCcEEEECCCC-CEEEEeCCC--CEEEEEECCCCCE-EEEEcccCCCCcceeEEECCCCcEEEEC
Confidence 1122111 11 1112467777 466544321 2378888865432 3333333322335678888877888874
Q ss_pred ecCCeeEEEEEeCC
Q 004766 368 LSDVKYVLQIRDLK 381 (732)
Q Consensus 368 ~~~g~~~l~~~d~~ 381 (732)
.+ ..|.+|+..
T Consensus 269 -~~--~~v~v~~~~ 279 (286)
T 1q7f_A 269 -KD--YRLYIYRYV 279 (286)
T ss_dssp -TT--TEEEEEECS
T ss_pred -CC--CeEEEEEcc
Confidence 44 478888765
No 487
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=97.23 E-value=0.00071 Score=72.33 Aligned_cols=136 Identities=13% Similarity=0.101 Sum_probs=78.5
Q ss_pred EEccCCCeeEEEEEEEcCCCCCCCCccEEEEEcCCCCccCCCCcChh----------------HHHHHHhcCcEEEEEcc
Q 004766 456 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVS----------------RTILMRHLGAVFCIANI 519 (732)
Q Consensus 456 ~~s~dG~~~i~~~~~~p~~~~~~~~~P~vv~~hG~~~~~~~~~~~~~----------------~~~~l~~~G~~v~~~~~ 519 (732)
++-.++ ..+..+++.... .....|++|++|||||.+....+..+ -.. +. +-..++.+|.
T Consensus 26 v~v~~~-~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~s-w~-~~~~~lfiDq 100 (452)
T 1ivy_A 26 LKSSGS-KHLHYWFVESQK--DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYS-WN-LIANVLYLES 100 (452)
T ss_dssp EECSTT-EEEEEEEECCSS--CGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTC-GG-GSSEEEEECC
T ss_pred EeeCCC-CeEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCc-cc-ccccEEEEec
Confidence 344457 788888665433 12468999999999997643111000 011 12 4567888996
Q ss_pred -cCCCCCchhHHhcccccCCccHHHHHHHH-HHHHHHcCCCCCCcEEEEecChhHHHHHHHHh----hCCCeeeEEEEcC
Q 004766 520 -RGGGEYGEEWHKGGALAKKQNCFDDFISA-SEYLISAGYTQSRKLCIEGGSNGGLLVGACIN----QRPDLFGCALAHV 593 (732)
Q Consensus 520 -rG~g~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~----~~p~~f~a~v~~~ 593 (732)
+|.| |...- ............+|+... .+|+....-...+++.|.|.|+||..+..++. ..+-.++++++..
T Consensus 101 P~GtG-fS~~~-~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign 178 (452)
T 1ivy_A 101 PAGVG-FSYSD-DKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGN 178 (452)
T ss_dssp STTST-TCEES-SCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEES
T ss_pred CCCCC-cCCcC-CCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecC
Confidence 5654 33210 000000111234444444 44554432234578999999999995555444 3356789999999
Q ss_pred Ccccc
Q 004766 594 GVMDM 598 (732)
Q Consensus 594 p~~d~ 598 (732)
|++|.
T Consensus 179 ~~~d~ 183 (452)
T 1ivy_A 179 GLSSY 183 (452)
T ss_dssp CCSBH
T ss_pred CccCh
Confidence 98874
No 488
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.19 E-value=0.22 Score=49.38 Aligned_cols=230 Identities=11% Similarity=0.018 Sum_probs=123.7
Q ss_pred EEEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc--cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCC
Q 004766 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL--SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT 210 (732)
Q Consensus 133 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~ 210 (732)
....+.++++|+.. ++ +..+ ..|+++|.. |+...... ......++++.++|+ |+++..
T Consensus 63 ~~~~i~~~~~g~l~-v~-~~~~---~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~------------- 122 (300)
T 2qc5_A 63 KVMCLIVSSLGDIW-FT-ENGA---NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGD-IWFTQL------------- 122 (300)
T ss_dssp CEEEEEECTTSCEE-EE-ETTT---TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTC-EEEEET-------------
T ss_pred cceeEEECCCCCEE-EE-ecCC---CeEEEECCC-CCeEEecCCCCCCCCccceECCCCC-EEEEcc-------------
Confidence 35678899999733 33 3222 268889987 65432111 112346788888886 555431
Q ss_pred cccCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccC
Q 004766 211 ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 290 (732)
Q Consensus 211 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 290 (732)
....|++++.. +. ...+..+........+.++++|+ |++... . ...|+.++..+ .
T Consensus 123 -----~~~~i~~~~~~-g~---~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~-~---~~~i~~~~~~g-~---------- 177 (300)
T 2qc5_A 123 -----NGDRIGKLTAD-GT---IYEYDLPNKGSYPAFITLGSDNA-LWFTEN-Q---NNSIGRITNTG-K---------- 177 (300)
T ss_dssp -----TTTEEEEECTT-SC---EEEEECSSTTCCEEEEEECTTSS-EEEEET-T---TTEEEEECTTC-C----------
T ss_pred -----CCCeEEEECCC-CC---EEEccCCCCCCCceeEEECCCCC-EEEEec-C---CCeEEEECCCC-c----------
Confidence 12357777654 22 12222222223456788999998 444332 1 24588888733 1
Q ss_pred CCCCcEEeee--cccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEE
Q 004766 291 GLLPFVKLID--GFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSY 367 (732)
Q Consensus 291 ~~~~~~~l~~--~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~ 367 (732)
...... ...... ..++++| .+|+.... ...|++++. ++. ...+..........++.+.+++.+++..
T Consensus 178 ----~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~---~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 178 ----LEEYPLPTNAAAPVGITSGNDG-ALWFVEIM---GNKIGRITT-TGE-ISEYDIPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp ----EEEEECSSTTCCEEEEEECTTS-SEEEEETT---TTEEEEECT-TCC-EEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred ----EEEeeCCCCCCCcceEEECCCC-CEEEEccC---CCEEEEEcC-CCc-EEEEECCCCCCCceEEEECCCCCEEEec
Confidence 111111 111111 2355665 57765543 346999987 333 3333212223446677777667787776
Q ss_pred ecCCeeEEEEEeCCCCceeeecccc--cceeeEeecccCCcEEEEEEecCCCCceEEEEECC
Q 004766 368 LSDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 427 (732)
Q Consensus 368 ~~~g~~~l~~~d~~~g~~~~~l~~~--~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~ 427 (732)
..+ ..|.+++.+ |+. ..+..+ ...+..+..+++|. ++++ +. . .++++|+.
T Consensus 248 ~~~--~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~--~~-~--~i~~~~p~ 299 (300)
T 2qc5_A 248 WGA--NQIGRITND-NTI-QEYQLQTENAEPHGITFGKDGS-VWFA--LK-C--KIGKLNLN 299 (300)
T ss_dssp TTT--TEEEEECTT-SCE-EEEECCSTTCCCCCEEECTTSC-EEEE--CS-S--EEEEEEEC
T ss_pred cCC--CeEEEECCC-CcE-EEEECCccCCccceeEeCCCCC-EEEE--cc-C--ceEEeCCC
Confidence 443 478899984 654 344333 23445566677765 5554 22 2 78877753
No 489
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.12 E-value=0.14 Score=51.37 Aligned_cols=256 Identities=9% Similarity=-0.004 Sum_probs=123.5
Q ss_pred CCcEEEEEE-eccCCceEEEEEEECCCCceecc-cccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccE
Q 004766 142 DAKYLAYAL-SYSGSDWATIKLMRIEDQIVEAD-ALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHE 219 (732)
Q Consensus 142 DG~~la~~~-~~~G~e~~~i~v~dl~~g~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (732)
+++.++|.- ...+....+++++|+.+++.... .....+....+..-+++.+++.-... ......
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~--------------~~~~~~ 79 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDG--------------RSRLSS 79 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS--------------SCBCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCC--------------CccCce
Confidence 444444442 22223334789999988873221 11111112233344665444322111 123356
Q ss_pred EEEEECCCCCCC-CeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEe
Q 004766 220 FYYHFLGTKQSE-DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKL 298 (732)
Q Consensus 220 v~~~~lgt~~~~-~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l 298 (732)
++++++.+.... -..+-..+. +...... ..-+++..++.........++++++|+.+.. |..+
T Consensus 80 ~~~~d~~~~~~~~W~~~~~~p~-~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--------------W~~~ 143 (301)
T 2vpj_A 80 VECLDYTADEDGVWYSVAPMNV-RRGLAGA-TTLGDMIYVSGGFDGSRRHTSMERYDPNIDQ--------------WSML 143 (301)
T ss_dssp EEEEETTCCTTCCCEEECCCSS-CCBSCEE-EEETTEEEEECCBCSSCBCCEEEEEETTTTE--------------EEEE
T ss_pred EEEEECCCCCCCeeEECCCCCC-CccceeE-EEECCEEEEEcccCCCcccceEEEEcCCCCe--------------EEEC
Confidence 889998775410 112211111 1111112 2236655444433322235679999987632 4443
Q ss_pred eecccc--eEEEEEecCCeEEEEeCCCC--CCceEEEEeCCCCCCceEeccCCCCCceeEEEEecCCEEEEEEecCC---
Q 004766 299 IDGFDA--QYEVIANDDTVFTFLTNKDA--PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV--- 371 (732)
Q Consensus 299 ~~~~~~--~~~~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~~~g--- 371 (732)
...... ....... ++.||++...+. ....++.+|+.+.. |+.+.+......-......+ +.|++....++
T Consensus 144 ~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~-~~i~v~GG~~~~~~ 220 (301)
T 2vpj_A 144 GDMQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGH-WTNVTPMATKRSGAGVALLN-DHIYVVGGFDGTAH 220 (301)
T ss_dssp EECSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEET-TEEEEECCBCSSSB
T ss_pred CCCCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCc-EEeCCCCCcccccceEEEEC-CEEEEEeCCCCCcc
Confidence 321111 1122222 567887765432 24579999998876 88774322122222333444 78888765443
Q ss_pred eeEEEEEeCCCCceeeecc-cc--cceeeEeecccCCcEEEEEEecCC---CCceEEEEECCCCCCceEEEE
Q 004766 372 KYVLQIRDLKNGSLLHQLP-IE--IGSVNAISARREDSVVFISFTSFL---IPGIVYQCNLKTETPEMKIFR 437 (732)
Q Consensus 372 ~~~l~~~d~~~g~~~~~l~-~~--~g~v~~~~~s~d~~~l~~~~ss~~---~p~~~y~~d~~~~~~~~~~l~ 437 (732)
...++++|+.+++. +.+. +| ......+. .+ +.+++. .+.. .-..++.||+.+.+ .+.+.
T Consensus 221 ~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~--~~-~~i~v~-GG~~~~~~~~~v~~yd~~~~~--W~~~~ 285 (301)
T 2vpj_A 221 LSSVEAYNIRTDSW-TTVTSMTTPRCYVGATV--LR-GRLYAI-AGYDGNSLLSSIECYDPIIDS--WEVVT 285 (301)
T ss_dssp CCCEEEEETTTTEE-EEECCCSSCCBSCEEEE--ET-TEEEEE-CCBCSSSBEEEEEEEETTTTE--EEEEE
T ss_pred cceEEEEeCCCCcE-EECCCCCCcccceeEEE--EC-CEEEEE-cCcCCCcccccEEEEcCCCCe--EEEcC
Confidence 35799999986664 4443 22 11111122 23 345443 2222 12578999998773 55543
No 490
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.12 E-value=0.094 Score=53.92 Aligned_cols=207 Identities=8% Similarity=-0.032 Sum_probs=101.8
Q ss_pred CEEEEeEEECCCCcEEEEEEeccC--CceEEEEEEECCCCceec-ccc------cceeeeeEEEEeCCcEEEEEEecCCC
Q 004766 131 TAALIKVSVSEDAKYLAYALSYSG--SDWATIKLMRIEDQIVEA-DAL------SWFKFSSIAWTHDSKGFFYSRYPAPK 201 (732)
Q Consensus 131 ~~~~~~~~~SPDG~~la~~~~~~G--~e~~~i~v~dl~~g~~~~-~~~------~~~~~~~~~WspDg~~l~y~~~~~~~ 201 (732)
.....++.++|||+ +|+++.+. .....|+++|+++|+.+. ... ......+++++|++..+|++.. .
T Consensus 66 ~~~p~gv~~d~~g~--L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~-~-- 140 (343)
T 2qe8_A 66 FDTVLGIKSDGNGI--VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDP-A-- 140 (343)
T ss_dssp CSCEEEEEECSSSE--EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEEC-C--
T ss_pred eeEeeEEEEcCCCc--EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcC-c--
Confidence 34577899999997 34444330 002479999999988432 111 1112367899987766665521 0
Q ss_pred CCCCCCCCCcccCCcccEEEEEECCCCCCCC-------------------eEEE-ecCCC-----CeeEEEeEEecCCcE
Q 004766 202 EGKDMDAGTETDSNLYHEFYYHFLGTKQSED-------------------ILCW-KDPEH-----PKYIFSGHVTEDGQY 256 (732)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-------------------~~v~-~~~~~-----~~~~~~~~~SpDg~~ 256 (732)
......|+++++.++.... ..++ ...+. .....++++||||++
T Consensus 141 ------------~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ 208 (343)
T 2qe8_A 141 ------------PDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW 208 (343)
T ss_dssp ------------SGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE
T ss_pred ------------cCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCE
Confidence 0023356666654432100 0000 00000 012357899999999
Q ss_pred EEEEEecCCcceEEEEEEeCCCCCCC-c--ccccccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEe
Q 004766 257 LVMCIEENCDPVNKVYYCDLSALPEG-L--EGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVD 333 (732)
Q Consensus 257 l~~~~~~~~~~~~~l~~~d~~~~~~~-~--~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d 333 (732)
|++.... ...+|.++....... + ..+ ...+..+-......-..++++| .+|+... ...+|.++|
T Consensus 209 ly~~~~~----~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~g~pdgia~d~~G-~l~va~~---~~~~V~~~d 275 (343)
T 2qe8_A 209 LYLSPMH----STSMYRIKSADLSNLQLTDAEL-----GSKIERYSEKPICDGISIDKDH-NIYVGDL---AHSAIGVIT 275 (343)
T ss_dssp EEEEESS----CSEEEEEEHHHHTCTTCCHHHH-----HTTCEEEEECCSCSCEEECTTC-CEEEEEG---GGTEEEEEE
T ss_pred EEEEeCC----CCeEEEEEHHHhcCCCCChhhh-----hcceEecccCCCCceEEECCCC-CEEEEcc---CCCeEEEEE
Confidence 9876532 246888875321000 0 000 0001111110111122467776 4555432 245799999
Q ss_pred CCCCCCceEeccCCCCCceeEEEEecCCEEEEEEe
Q 004766 334 LKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 368 (732)
Q Consensus 334 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~~~~ 368 (732)
.++++ +..++.........++.+.+++.++++..
T Consensus 276 ~~~G~-~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 276 SADRA-YKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp TTTTE-EEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred CCCCC-EEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 84444 44444321123355666665555666554
No 491
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.10 E-value=0.038 Score=55.04 Aligned_cols=200 Identities=10% Similarity=-0.010 Sum_probs=101.8
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceeccc-cc-ceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LS-WFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~-~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
..+.++|||+.|+ +. + ..|+++|. +|+.+-.. .. .....+..++|||+.|+.....
T Consensus 40 ~~~~~~pdG~ilv-s~----~--~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~-------------- 97 (276)
T 3no2_A 40 NSVAATKAGEILF-SY----S--KGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGH-------------- 97 (276)
T ss_dssp CEEEECTTSCEEE-EC----B--SEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST--------------
T ss_pred cCeEECCCCCEEE-eC----C--CCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCC--------------
Confidence 3677999999776 31 2 25889998 67644211 11 1234678899999877654320
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecC------CCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccc
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDP------EHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 286 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~------~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 286 (732)
..+|+.++.. +. ++++.. ........+..++||.+|+... . ...|+.+|.++ +
T Consensus 98 ----~~~v~~vd~~-Gk----~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~--~---~~~v~~~d~~G-~------ 156 (276)
T 3no2_A 98 ----PSTILEVNMK-GE----VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF--A---TSEVREIAPNG-Q------ 156 (276)
T ss_dssp ----TEEEEEECTT-SC----EEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET--T---TTEEEEECTTS-C------
T ss_pred ----CCEEEEEeCC-CC----EEEEEeccCCCCcccccccCceECCCCCEEEEec--C---CCEEEEECCCC-C------
Confidence 1234444331 11 111100 0001112456789999875432 1 34688888873 2
Q ss_pred cccCCCCCcEEeeecccceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCC-ceEeccCCCC---CceeEEEEecCCE
Q 004766 287 KKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND-WFEVIPEAER---DVLESATAVNLNQ 362 (732)
Q Consensus 287 ~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~l~~~~~~---~~l~~~~~~~~~~ 362 (732)
..|+. ............++|+.++ .... +.+|+.+|.++++. |+.-....+. ..+.++...+++.
T Consensus 157 ------~~w~~-~~~~~~~~~~~~~~g~~~v-~~~~---~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~ 225 (276)
T 3no2_A 157 ------LLNSV-KLSGTPFSSAFLDNGDCLV-ACGD---AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG 225 (276)
T ss_dssp ------EEEEE-ECSSCCCEEEECTTSCEEE-ECBT---TSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSC
T ss_pred ------EEEEE-ECCCCccceeEcCCCCEEE-EeCC---CCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCC
Confidence 11221 1111111123456666444 3322 34799999987762 3321111111 2245566666677
Q ss_pred EEEEEecC--------CeeEEEEEeCCCCceeeec
Q 004766 363 MIVSYLSD--------VKYVLQIRDLKNGSLLHQL 389 (732)
Q Consensus 363 l~~~~~~~--------g~~~l~~~d~~~g~~~~~l 389 (732)
+++..... +..+++.++.+ |+.+-++
T Consensus 226 i~v~~~~g~~~~~~~~~~~~~~~~~~~-g~~~W~~ 259 (276)
T 3no2_A 226 LYICNWQGHDREAGKGKHPQLVEIDSE-GKVVWQL 259 (276)
T ss_dssp EEEEEECTTCTTGGGSCCCSEEEECTT-SBEEEEE
T ss_pred EEEEeccCccccccccCCceEEEECCC-CCEEEEe
Confidence 77766422 23466666664 6654333
No 492
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.97 E-value=0.071 Score=51.92 Aligned_cols=188 Identities=9% Similarity=-0.071 Sum_probs=104.6
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 214 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~ 214 (732)
.++.++ |++|..+....| +|+++|+++|+.+...... ...+-.-+++++.||...
T Consensus 58 qGL~~~--~~~Ly~stG~~g----~v~~iD~~Tgkv~~~~l~~-~~FgeGit~~g~~Ly~lt------------------ 112 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQG----TLRQLSLESAQPVWMERLG-NIFAEGLASDGERLYQLT------------------ 112 (268)
T ss_dssp EEEEEE--TTEEEEEETTTT----EEEECCSSCSSCSEEEECT-TCCEEEEEECSSCEEEEE------------------
T ss_pred ceEEEE--CCEEEEEcCCCC----EEEEEECCCCcEEeEECCC-CcceeEEEEeCCEEEEEE------------------
Confidence 467776 456655532222 4999999999965433322 122333466888887763
Q ss_pred CcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCC
Q 004766 215 NLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLP 294 (732)
Q Consensus 215 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 294 (732)
++...++.++..+......+ ..+. . +..+++||+.|+.+. + .+.|+++|.++.+.
T Consensus 113 w~~~~v~V~D~~Tl~~~~ti--~~~~-e----GwGLt~Dg~~L~vSd--G---s~~l~~iDp~T~~v------------- 167 (268)
T 3nok_A 113 WTEGLLFTWSGMPPQRERTT--RYSG-E----GWGLCYWNGKLVRSD--G---GTMLTFHEPDGFAL------------- 167 (268)
T ss_dssp SSSCEEEEEETTTTEEEEEE--ECSS-C----CCCEEEETTEEEEEC--S---SSEEEEECTTTCCE-------------
T ss_pred ccCCEEEEEECCcCcEEEEE--eCCC-c----eeEEecCCCEEEEEC--C---CCEEEEEcCCCCeE-------------
Confidence 45568999998775432221 1111 1 234568999876542 3 35799999887420
Q ss_pred cEEeeeccc-------ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCce--E---ecc------CCCCCceeEEE
Q 004766 295 FVKLIDGFD-------AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWF--E---VIP------EAERDVLESAT 356 (732)
Q Consensus 295 ~~~l~~~~~-------~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~--~---l~~------~~~~~~l~~~~ 356 (732)
...+..... .+.. |. +| +||.-.-. ...|.++|.++++... . |.+ ......+.+++
T Consensus 168 ~~~I~V~~~g~~v~~lNeLe-~~-dG-~lyanvw~---s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA 241 (268)
T 3nok_A 168 VGAVQVKLRGQPVELINELE-CA-NG-VIYANIWH---SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIA 241 (268)
T ss_dssp EEEEECEETTEECCCEEEEE-EE-TT-EEEEEETT---CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEE
T ss_pred EEEEEeCCCCcccccccccE-Ee-CC-EEEEEECC---CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEE
Confidence 112211111 0111 33 55 67743322 2379999999886211 1 111 11235789999
Q ss_pred EecC-CEEEEEEecCCeeEEEEEeC
Q 004766 357 AVNL-NQMIVSYLSDVKYVLQIRDL 380 (732)
Q Consensus 357 ~~~~-~~l~~~~~~~g~~~l~~~d~ 380 (732)
+.++ ++||++...= ++||.+.+
T Consensus 242 ~dp~~~rlfVTGK~W--p~~~ev~~ 264 (268)
T 3nok_A 242 VEPGSGRIFMTGKLW--PRLFEVRL 264 (268)
T ss_dssp ECTTTCCEEEEETTC--SEEEEEEE
T ss_pred EcCCCCEEEEeCCCC--CceEEEEE
Confidence 9874 6677765432 55655443
No 493
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.92 E-value=0.78 Score=51.29 Aligned_cols=228 Identities=11% Similarity=0.089 Sum_probs=133.4
Q ss_pred cEEEEEEeccCCceEEEEEEECCCCceec-ccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEE
Q 004766 144 KYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFY 221 (732)
Q Consensus 144 ~~la~~~~~~G~e~~~i~v~dl~~g~~~~-~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~ 221 (732)
.+|.|+. + ..|+.+|+++..... ....+ ....+++|.+++..||++.. ...+|+
T Consensus 7 ~~Ll~s~---~---~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~------------------~~~~I~ 62 (628)
T 4a0p_A 7 AFLLFSR---R---ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDI------------------SLKTIS 62 (628)
T ss_dssp CEEEEEE---T---TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEET------------------TTTEEE
T ss_pred cEEEEEe---C---CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEEC------------------CCCeEE
Confidence 3677763 2 378999998765211 11111 12368999999888988742 234788
Q ss_pred EEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEee-e
Q 004766 222 YHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-D 300 (732)
Q Consensus 222 ~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~-~ 300 (732)
+.++.+... ..+..... ....++++.+.++.|++.... ...|.++++++.. .+.+. .
T Consensus 63 r~~~~g~~~--~~v~~~g~--~~P~GlAvD~~~~~LY~tD~~----~~~I~v~~~dG~~--------------~~~l~~~ 120 (628)
T 4a0p_A 63 RAFMNGSAL--EHVVEFGL--DYPEGMAVDWLGKNLYWADTG----TNRIEVSKLDGQH--------------RQVLVWK 120 (628)
T ss_dssp EEETTSCSC--EEEECSSC--SCCCEEEEETTTTEEEEEETT----TTEEEEEETTSTT--------------CEEEECS
T ss_pred EEECCCCCc--EEEEeCCC--CCcceEEEEeCCCEEEEEECC----CCEEEEEecCCCc--------------EEEEEeC
Confidence 888865432 23433221 112367888888888776432 3578999987632 22333 2
Q ss_pred cccceE-EEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEec-CCEEEEEEecCCeeEEEEE
Q 004766 301 GFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIR 378 (732)
Q Consensus 301 ~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~l~~~~~~~g~~~l~~~ 378 (732)
...... ..+.|....||+ ++.+ ...+|+++++++.. .+.++.. -....++.+.. +++||++.... ..|+++
T Consensus 121 ~l~~P~~iavdp~~G~lY~-tD~g-~~~~I~r~~~dG~~-~~~l~~~--~~~P~GlalD~~~~~LY~aD~~~--~~I~~~ 193 (628)
T 4a0p_A 121 DLDSPRALALDPAEGFMYW-TEWG-GKPKIDRAAMDGSE-RTTLVPN--VGRANGLTIDYAKRRLYWTDLDT--NLIESS 193 (628)
T ss_dssp SCCCEEEEEEETTTTEEEE-EECS-SSCEEEEEETTSCS-CEEEECS--CSSEEEEEEETTTTEEEEEETTT--TEEEEE
T ss_pred CCCCcccEEEccCCCeEEE-eCCC-CCCEEEEEeCCCCc-eEEEECC--CCCcceEEEccccCEEEEEECCC--CEEEEE
Confidence 222111 246676667776 4432 25689999998765 4555543 24456788886 37788876544 589999
Q ss_pred eCCCCceeeecccccceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 379 DLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 379 d~~~g~~~~~l~~~~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
+++ |...+.+........+++. +++.+|++- ..-..++++|..+++
T Consensus 194 d~d-G~~~~v~~~~l~~P~glav--~~~~ly~tD---~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 194 NML-GLNREVIADDLPHPFGLTQ--YQDYIYWTD---WSRRSIERANKTSGQ 239 (628)
T ss_dssp ETT-SCSCEEEEECCSCEEEEEE--ETTEEEEEE---TTTTEEEEEETTTCC
T ss_pred cCC-CCceEEeeccCCCceEEEE--ECCEEEEec---CCCCEEEEEECCCCC
Confidence 997 5432333211112223443 345666542 234678999987765
No 494
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.90 E-value=0.0037 Score=71.34 Aligned_cols=222 Identities=11% Similarity=0.015 Sum_probs=116.9
Q ss_pred EEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCC--CCCeEEE
Q 004766 159 TIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQ--SEDILCW 236 (732)
Q Consensus 159 ~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~--~~~~~v~ 236 (732)
.|+++++++++............+++|.+++..||++. ....+|+++++.+.. .....+.
T Consensus 387 ~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD------------------~~~~~I~~~~~~g~~~~~~~~~~i 448 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSD------------------LSQRMICSTQLDRAHGVSSYDTVI 448 (699)
T ss_dssp C-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECC------------------TTTTSBEEEESCCCCC-CCCCCBC
T ss_pred ceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEe------------------cCCCeEEEEecCCCCCCcceEEEE
Confidence 68888988876443221111236899999888888762 123457888876410 0111111
Q ss_pred ecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEeee-ccc-ceEEEEEecCC
Q 004766 237 KDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFD-AQYEVIANDDT 314 (732)
Q Consensus 237 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~s~dg~ 314 (732)
... .....++++.+.++.|++... . ...|+++++++.. .+.+.. +.. ..-..+.|+++
T Consensus 449 ~~~--~~~P~glavD~~~g~LY~tD~--~--~~~I~v~d~dg~~--------------~~~l~~~~~~~P~giavDp~~g 508 (699)
T 1n7d_A 449 SRD--IQAPDGLAVDWIHSNIYWTDS--V--LGTVSVADTKGVK--------------RKTLFREQGSKPRAIVVDPVHG 508 (699)
T ss_dssp CSC--C--CCCEECCCSSSBCEECCT--T--TSCEEEEBSSSCC--------------EEEECCCSSCCCCCEECCSSSS
T ss_pred eCC--CCCcceEEEEeeCCcEEEEec--c--CCeEEEEecCCCc--------------eEEEEeCCCCCcceEEEccCCC
Confidence 110 001135677776777655421 1 3458888887631 222222 111 11124667777
Q ss_pred eEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCCCCceeeeccc-c
Q 004766 315 VFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI-E 392 (732)
Q Consensus 315 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~-~ 392 (732)
.||+ ++.+ ...+|+++++++.. .+.++... -..-.++++.++ ++||++.... .+|++++++ |...+.+.. .
T Consensus 509 ~ly~-td~~-~~~~I~~~~~dG~~-~~~l~~~~-l~~PnGlavd~~~~~LY~aD~~~--~~I~~~d~d-G~~~~~~~~~~ 581 (699)
T 1n7d_A 509 FMYW-TDWG-TPAKIKKGGLNGVD-IYSLVTEN-IQWPNGITLDLLSGRLYWVDSKL--HSISSIDVN-GGNRKTILEDE 581 (699)
T ss_dssp CCEE-CCCS-SSCCEEBCCSSSCC-CCEESCSS-CSSCCCEEECTTTCCEEEEETTT--TEEEEECSS-SSCCEEECCCS
T ss_pred cEEE-cccC-CCCeEEEEeCCCCC-eeEEEeCC-CCCccEEEEeccCCEEEEEecCC--CeEEEEccC-CCceEEEEecC
Confidence 7775 4432 23579999887654 34444332 233457888853 6788776443 689999997 543233321 1
Q ss_pred --cceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCC
Q 004766 393 --IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 430 (732)
Q Consensus 393 --~g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~ 430 (732)
.....++++ +++.+|++- ..-.+|++++..+++
T Consensus 582 ~~~~~P~glav--d~~~lywtd---~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 582 KRLAHPFSLAV--FEDKVFWTD---IINEAIFSANRLTGS 616 (699)
T ss_dssp SSCSSCCCCEE--ETTEEEEEC---STTTCEEEEETTTEE
T ss_pred CcCCCceEeEE--ECCEEEEEe---CCCCeEEEEEccCCC
Confidence 111112232 445555443 233678888876663
No 495
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.89 E-value=0.18 Score=53.68 Aligned_cols=157 Identities=10% Similarity=0.004 Sum_probs=84.0
Q ss_pred EeEEECCC--CcEEEEEEeccCCceEEEEEEECCCCceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 135 IKVSVSED--AKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 135 ~~~~~SPD--G~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
.++.|+|+ +.. +|..+.. ..|+.+|+++|.............+++|++||+ ||++.....
T Consensus 142 ~gvavd~~s~~g~-Lyv~D~~----~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~------------ 203 (433)
T 4hw6_A 142 WRMMFDPNSNYDD-LYWVGQR----DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSS------------ 203 (433)
T ss_dssp CEEEECTTTTTCE-EEEECBT----SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSC------------
T ss_pred ceEEEccccCCCE-EEEEeCC----CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCC------------
Confidence 47889995 344 4555543 479999998887543222222247899999999 666542110
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL 292 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 292 (732)
.....++.............+. ... ...+++++|++..|++... . ...|+.++.+++..
T Consensus 204 --~~~~gv~~~~~~~~~~~~~~~~-~~~---~P~giavd~~~G~lyv~d~--~--~~~V~~~d~~~g~~----------- 262 (433)
T 4hw6_A 204 --DTNTGIYLFTRASGFTERLSLC-NAR---GAKTCAVHPQNGKIYYTRY--H--HAMISSYDPATGTL----------- 262 (433)
T ss_dssp --TTSEEEEEECGGGTTCCEEEEE-ECS---SBCCCEECTTTCCEEECBT--T--CSEEEEECTTTCCE-----------
T ss_pred --cccceEEEEECCCCeecccccc-ccC---CCCEEEEeCCCCeEEEEEC--C--CCEEEEEECCCCeE-----------
Confidence 0112244444332221111121 111 1135788995555655432 1 35799999875420
Q ss_pred CCcEEeee-cc-c-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCC
Q 004766 293 LPFVKLID-GF-D-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK 335 (732)
Q Consensus 293 ~~~~~l~~-~~-~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 335 (732)
...+.. +. . .....++|+|+.||+.-.. +.+|++++.+
T Consensus 263 --~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~---~~~I~~~~~d 303 (433)
T 4hw6_A 263 --TEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG---KHCIYRVDYN 303 (433)
T ss_dssp --EEEEEECSCCSSCEEEEECTTSSEEEEEETT---TTEEEEEEBC
T ss_pred --EEEEeccCCCCCcccEEEeCCCCEEEEEeCC---CCEEEEEeCC
Confidence 012211 11 1 1123589999888875432 4578888765
No 496
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.66 E-value=0.71 Score=48.98 Aligned_cols=120 Identities=8% Similarity=0.094 Sum_probs=68.9
Q ss_pred EEeEEECCCCcEEEEEEeccCCceEEEEEEECCCCceecccc-cceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcc
Q 004766 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTET 212 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~g~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~ 212 (732)
..+++++|+|++|.++-..++.....+.+++.+++......+ ......+++++|++..||++..
T Consensus 181 P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~--------------- 245 (430)
T 3tc9_A 181 VRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSW--------------- 245 (430)
T ss_dssp EEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCCEEEEET---------------
T ss_pred cceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCEEEEEEC---------------
Confidence 457899999997765543333333456667654432210111 1112367889995556777632
Q ss_pred cCCcccEEEEEECCCCCCCCeEEEecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCC
Q 004766 213 DSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 278 (732)
Q Consensus 213 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 278 (732)
...+|++++..++... .++.... ..+-..++++|||++|++.... ...|+.++.++
T Consensus 246 ---~~~~V~~~~~~~~~~~--~~~~~~~-~~~P~gia~~pdG~~lyv~d~~----~~~I~~~~~d~ 301 (430)
T 3tc9_A 246 ---NAGQVFRYDFTTQETT--PLFTIQD-SGWEFHIQFHPSGNYAYIVVVN----QHYILRSDYDW 301 (430)
T ss_dssp ---TTTEEEEEETTTTEEE--EEEECSS-SSCCEEEEECTTSSEEEEEETT----TTEEEEEEEET
T ss_pred ---CCCEEEEEECCCCcEE--EEEEcCC-CCcceeEEEcCCCCEEEEEECC----CCEEEEEeCCc
Confidence 3357999988754321 2333322 1233578999999988776432 34577776553
No 497
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.66 E-value=0.36 Score=53.93 Aligned_cols=227 Identities=9% Similarity=0.021 Sum_probs=0.0
Q ss_pred EEEEEECCCC--ceecccccceeeeeEEEEeCCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECCCCCCCCeEEE
Q 004766 159 TIKLMRIEDQ--IVEADALSWFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCW 236 (732)
Q Consensus 159 ~i~v~dl~~g--~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~ 236 (732)
+|+++|+++. +............+++|++++..||++ .....+|++.++.+......++.
T Consensus 19 ~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~s------------------D~~~~~I~r~~~~g~~~~~~v~~ 80 (619)
T 3s94_A 19 DLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWS------------------DVSEEAIKRTEFNKTESVQNVVV 80 (619)
T ss_dssp BEEEECCC---------CBCCSCEEEEEEETTTTEEEEE------------------ETTTTEEEEEEC-----CEEEEC
T ss_pred cEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEE------------------ECCCCeEEEEEccCCCceEEEEe
Q ss_pred ecCCCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccccCCCCCcEEee-ecccceEE-EEEecCC
Q 004766 237 KDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFDAQYE-VIANDDT 314 (732)
Q Consensus 237 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~-~~s~dg~ 314 (732)
..-..+ .++++.+.++.|++...... .|.++++++.. .+.+. ........ .+.|.++
T Consensus 81 ~~~~~P---~GlAvD~~~~~ly~~d~~~~----~I~v~~~dG~~--------------~~~l~~~~l~~P~~Iavdp~~g 139 (619)
T 3s94_A 81 SGLLSP---DGLACDWLGEKLYWTDSETN----RIEVSNLDGSL--------------RKVLFWQELDQPRAIALDPSSG 139 (619)
T ss_dssp SSCSCE---EEEEEETTTTEEEEEETTTT----EEEEEETTSCS--------------CEEEECSSCSCCCCEEEETTTT
T ss_pred CCCCCc---CeEEEEecCCEEEEEeCCCC----EEEEEECCCCC--------------EEEEEeCCCCCCceEEEecCCC
Q ss_pred eEEEEeCCCCCCceEEEEeCCCCCCceEeccCCCCCceeEEEEecC-CEEEEEEecCCeeEEEEEeCCCCceeeeccccc
Q 004766 315 VFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEI 393 (732)
Q Consensus 315 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~l~~~~~~~g~~~l~~~d~~~g~~~~~l~~~~ 393 (732)
.||+.-- +...+|++.++++.. .+.++... -..-.++.+..+ ++||+..... ..|++++++.+.....+....
T Consensus 140 ~ly~tD~--g~~~~I~r~~~dG~~-~~~l~~~~-~~~P~Glald~~~~~LY~aD~~~--~~I~~~~~dG~~~~~~~~~~~ 213 (619)
T 3s94_A 140 FMYWTDW--GEVPKIERAGMDGSS-RFIIINSE-IYWPNGLTLDYEEQKLYWADAKL--NFIHKSNLDGTNRQAVVKGSL 213 (619)
T ss_dssp EEEEEEC--SSSCEEEEEETTSCS-CEEEECSS-CSSEEEEEEETTTTEEEEEETTT--CCEEEESSSCCEEC-------
T ss_pred eEEEecc--CCCCEEEEEECCCCc-eEEEEeCC-CCCCcEEEEEccCCEEEEEeCCC--CeEEEecCCCCccEEEEeCCC
Q ss_pred ceeeEeecccCCcEEEEEEecCCCCceEEEEECCCCCCceEEE
Q 004766 394 GSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIF 436 (732)
Q Consensus 394 g~v~~~~~s~d~~~l~~~~ss~~~p~~~y~~d~~~~~~~~~~l 436 (732)
....+++...+ .+|+ +-..-..++++|..+++ ..+.+
T Consensus 214 ~~P~gi~~~~~--~ly~---td~~~~~V~~~d~~tg~-~~~~i 250 (619)
T 3s94_A 214 PHPFALTLFED--ILYW---TDWSTHSILACNKYTGE-GLREI 250 (619)
T ss_dssp --CCCEEESSS--EEEE---ECTTTCSEEEEESSSCC-CCEEC
T ss_pred CCceEEEEeCC--EEEE---ecCCCCEEEEEECCCCc-ccEEE
No 498
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.64 E-value=0.3 Score=50.16 Aligned_cols=175 Identities=12% Similarity=0.041 Sum_probs=88.0
Q ss_pred EEEEEEECCC--Cceecccccc-------eeeeeEEEEe--CCcEEEEEEecCCCCCCCCCCCCcccCCcccEEEEEECC
Q 004766 158 ATIKLMRIED--QIVEADALSW-------FKFSSIAWTH--DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLG 226 (732)
Q Consensus 158 ~~i~v~dl~~--g~~~~~~~~~-------~~~~~~~Wsp--Dg~~l~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~lg 226 (732)
..|+++|+++ ++.....+.+ ....++...+ ||+.-+|+.+... ......|+.++.+
T Consensus 83 G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~-------------~~s~ielf~~d~~ 149 (355)
T 3sre_A 83 GKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG-------------SSSTVEVFKFQEE 149 (355)
T ss_dssp CEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST-------------TCCEEEEEEEETT
T ss_pred CeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC-------------CCCeEEEEEEECC
Confidence 4788888873 3322212211 1335677666 5664445544331 1122356666665
Q ss_pred CCCCCCeEEEecCCC-CeeEEEeEEecCCcEEEEEEecCC--------------cceEEEEEEeCCCCCCCcccccccCC
Q 004766 227 TKQSEDILCWKDPEH-PKYIFSGHVTEDGQYLVMCIEENC--------------DPVNKVYYCDLSALPEGLEGFKKRDG 291 (732)
Q Consensus 227 t~~~~~~~v~~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~--------------~~~~~l~~~d~~~~~~~~~~~~~~~~ 291 (732)
++. ...+-+.... -....++...++|+..+ .+... .....||.++...
T Consensus 150 ~~~--~~~~~~~~g~~~~~pND~~v~~~G~fyv--t~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~------------- 212 (355)
T 3sre_A 150 EKS--LLHLKTIRHKLLPSVNDIVAVGPEHFYA--TNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND------------- 212 (355)
T ss_dssp TTE--EEEEEEECCTTCSSEEEEEEEETTEEEE--EESCSCSSHHHHHHHHHTTCCCEEEEEECTTC-------------
T ss_pred CCE--EEEEeccccCCCCCCceEEEeCCCCEEe--cCCcEeCCcccccchhhccCCccEEEEEECCe-------------
Confidence 432 1222221111 12245788899998543 22210 1246788887531
Q ss_pred CCCcEEeeecccce-EEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCc--eEeccCCCCCceeEEEEec-CCEEEEEE
Q 004766 292 LLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW--FEVIPEAERDVLESATAVN-LNQMIVSY 367 (732)
Q Consensus 292 ~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~--~~l~~~~~~~~l~~~~~~~-~~~l~~~~ 367 (732)
.+.+..+.... -..|||||+.+|+.... ..+|++++++..... ..++. . .....++.+.. ++.+++..
T Consensus 213 ---~~~~~~~l~~pNGia~spDg~~lYvadt~---~~~I~~~~~~~~g~l~~~~~~~-~-~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 213 ---VRVVAEGFDFANGINISPDGKYVYIAELL---AHKIHVYEKHANWTLTPLRVLS-F-DTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp ---CEEEEEEESSEEEEEECTTSSEEEEEEGG---GTEEEEEEECTTSCEEEEEEEE-C-SSEEEEEEECTTTCCEEEEE
T ss_pred ---EEEeecCCcccCcceECCCCCEEEEEeCC---CCeEEEEEECCCCcEecCEEEe-C-CCCCceEEEeCCCCcEEEEe
Confidence 23333333221 12599999999986543 357888887642211 22332 1 23456677776 36777655
Q ss_pred ecC
Q 004766 368 LSD 370 (732)
Q Consensus 368 ~~~ 370 (732)
..+
T Consensus 285 ~~~ 287 (355)
T 3sre_A 285 HPN 287 (355)
T ss_dssp ESC
T ss_pred cCC
Confidence 433
No 499
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.62 E-value=0.006 Score=69.60 Aligned_cols=206 Identities=7% Similarity=0.025 Sum_probs=114.7
Q ss_pred EeEEECCCCcEEEEEEeccCCceEEEEEEECCC----Cceecccccc-eeeeeEEEEeCCcEEEEEEecCCCCCCCCCCC
Q 004766 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIED----QIVEADALSW-FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 209 (732)
Q Consensus 135 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~~----g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~~~~~ 209 (732)
.++.|++++.+|.++ +..+. .|+++++.+ .......... ....++++.+.++.||++-
T Consensus 409 ~gla~d~~~~~Ly~s-D~~~~---~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD------------- 471 (699)
T 1n7d_A 409 VALDTEVASNRIYWS-DLSQR---MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD------------- 471 (699)
T ss_dssp CCCEEETTTTEEEEC-CTTTT---SBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECC-------------
T ss_pred EEEccccccCeEEEE-ecCCC---eEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEe-------------
Confidence 367889988876554 43332 688889876 2211111111 1125677766666777652
Q ss_pred CcccCCcccEEEEEECCCCCCCCeEEEecC-CCCeeEEEeEEecCCcEEEEEEecCCcceEEEEEEeCCCCCCCcccccc
Q 004766 210 TETDSNLYHEFYYHFLGTKQSEDILCWKDP-EHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 288 (732)
Q Consensus 210 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 288 (732)
....+|++.++.+... ..+.... ..+ .+++++|++.+|+++... . ...|+++++++..
T Consensus 472 -----~~~~~I~v~d~dg~~~--~~l~~~~~~~P---~giavDp~~g~ly~td~~-~--~~~I~~~~~dG~~-------- 530 (699)
T 1n7d_A 472 -----SVLGTVSVADTKGVKR--KTLFREQGSKP---RAIVVDPVHGFMYWTDWG-T--PAKIKKGGLNGVD-------- 530 (699)
T ss_dssp -----TTTSCEEEEBSSSCCE--EEECCCSSCCC---CCEECCSSSSCCEECCCS-S--SCCEEBCCSSSCC--------
T ss_pred -----ccCCeEEEEecCCCce--EEEEeCCCCCc---ceEEEccCCCcEEEcccC-C--CCeEEEEeCCCCC--------
Confidence 1234577777764321 1222211 122 367889988888765422 1 2568888876521
Q ss_pred cCCCCCcEEeee-ccc-ceEEEEEecCCeEEEEeCCCCCCceEEEEeCCCCCCceEeccCC-CCCceeEEEEecCCEEEE
Q 004766 289 RDGLLPFVKLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-ERDVLESATAVNLNQMIV 365 (732)
Q Consensus 289 ~~~~~~~~~l~~-~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~l~~~~~~~~~~l~~ 365 (732)
.+.+.. ... ..-..|++++++||+.-. ...+|.++++++.. .+.++... ......++.+.. ++||+
T Consensus 531 ------~~~l~~~~l~~PnGlavd~~~~~LY~aD~---~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd~-~~lyw 599 (699)
T 1n7d_A 531 ------IYSLVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFE-DKVFW 599 (699)
T ss_dssp ------CCEESCSSCSSCCCEEECTTTCCEEEEET---TTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEET-TEEEE
T ss_pred ------eeEEEeCCCCCccEEEEeccCCEEEEEec---CCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEEC-CEEEE
Confidence 111211 111 112357888888887543 24689999997654 34454321 112223566666 67887
Q ss_pred EEecCCeeEEEEEeCCCCceeeeccc
Q 004766 366 SYLSDVKYVLQIRDLKNGSLLHQLPI 391 (732)
Q Consensus 366 ~~~~~g~~~l~~~d~~~g~~~~~l~~ 391 (732)
+.... .+|.+++..+|+.++.|..
T Consensus 600 td~~~--~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 600 TDIIN--EAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp ECSTT--TCEEEEETTTEEEEECCCT
T ss_pred EeCCC--CeEEEEEccCCCceEEeec
Confidence 76443 5799999877876666644
No 500
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.57 E-value=0.12 Score=51.96 Aligned_cols=163 Identities=6% Similarity=-0.019 Sum_probs=87.4
Q ss_pred EEeEEECCCCcEEEEEEeccC-----------CceEEEEEEECCCCceecccccceeeeeEEEE----eCCcEEEEEEec
Q 004766 134 LIKVSVSEDAKYLAYALSYSG-----------SDWATIKLMRIEDQIVEADALSWFKFSSIAWT----HDSKGFFYSRYP 198 (732)
Q Consensus 134 ~~~~~~SPDG~~la~~~~~~G-----------~e~~~i~v~dl~~g~~~~~~~~~~~~~~~~Ws----pDg~~l~y~~~~ 198 (732)
+..+.++|||+.+ ++....+ .....|+.+|.+ |+............+++|+ |||+.|+++..
T Consensus 119 ~~~i~~d~~g~l~-v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~- 195 (314)
T 1pjx_A 119 CNDCAFDYEGNLW-ITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAET- 195 (314)
T ss_dssp CCEEEECTTSCEE-EEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEET-
T ss_pred CcCEEECCCCCEE-EEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEEC-
Confidence 4578899999743 3322110 012478888876 5533211111123678999 99988877632
Q ss_pred CCCCCCCCCCCCcccCCcccEEEEEECC-CCCCCCe-EEEecCCCC-eeEEEeEEecCCcEEEEEEecCCcceEEEEEEe
Q 004766 199 APKEGKDMDAGTETDSNLYHEFYYHFLG-TKQSEDI-LCWKDPEHP-KYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCD 275 (732)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~v~~~~lg-t~~~~~~-~v~~~~~~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d 275 (732)
....|+++++. ++..... .+...+... ....++++++||+..+ .... ...|++++
T Consensus 196 -----------------~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v-~~~~----~~~i~~~d 253 (314)
T 1pjx_A 196 -----------------PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLV-ANWG----SSHIEVFG 253 (314)
T ss_dssp -----------------TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEE-EEET----TTEEEEEC
T ss_pred -----------------CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEE-EEcC----CCEEEEEc
Confidence 22467777764 2211111 122222211 3445788999997543 3221 23588888
Q ss_pred CCCCCCCcccccccCCCCCcEEeeecccc-eEEEEEecCCeEEEEeCCCCCCceEEEEeCCCC
Q 004766 276 LSALPEGLEGFKKRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 337 (732)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 337 (732)
.+++.. ...+...... .-..++++|+.||+.+..+ ..|++++++..
T Consensus 254 ~~~g~~-------------~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~---~~l~~~~~~~~ 300 (314)
T 1pjx_A 254 PDGGQP-------------KMRIRCPFEKPSNLHFKPQTKTIFVTEHEN---NAVWKFEWQRN 300 (314)
T ss_dssp TTCBSC-------------SEEEECSSSCEEEEEECTTSSEEEEEETTT---TEEEEEECSSC
T ss_pred CCCCcE-------------eEEEeCCCCCceeEEECCCCCEEEEEeCCC---CeEEEEeCCCC
Confidence 774320 1222111111 1124678888888766532 47899987654
Done!