Your job contains 1 sequence.
>004767
MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI
VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF
GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL
QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA
LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY
HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF
EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP
LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN
FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT
MPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEV
SSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDL
ELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELEVLSANLI
TSIGAFKVSTFL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004767
(732 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030943 - symbol:PAPS1 "poly(A) polymerase 1" ... 2210 4.8e-229 1
TAIR|locus:2134113 - symbol:nPAP "nuclear poly(a) polymer... 1786 4.1e-184 1
TAIR|locus:2043560 - symbol:PAPS2 "poly(A) polymerase 2" ... 1748 4.3e-180 1
DICTYBASE|DDB_G0288259 - symbol:papA "poly(A) polymerase"... 1234 1.3e-125 1
ZFIN|ZDB-GENE-030131-3507 - symbol:papola "poly(A) polyme... 1123 2.9e-116 2
UNIPROTKB|Q9BWT3 - symbol:PAPOLG "Poly(A) polymerase gamm... 1096 3.3e-115 2
ZFIN|ZDB-GENE-040426-1256 - symbol:papolg "poly(A) polyme... 1135 3.9e-115 1
MGI|MGI:2442119 - symbol:Papolg "poly(A) polymerase gamma... 1094 8.9e-113 2
RGD|1310337 - symbol:Papolg "poly(A) polymerase gamma" sp... 1093 1.1e-112 2
UNIPROTKB|F1NKG9 - symbol:PAPOLA "Uncharacterized protein... 1108 2.9e-112 1
MGI|MGI:109301 - symbol:Papola "poly (A) polymerase alpha... 1104 7.6e-112 1
UNIPROTKB|G3MYA2 - symbol:PAPOLA "Poly(A) polymerase alph... 1102 1.2e-111 1
UNIPROTKB|P25500 - symbol:PAPOLA "Poly(A) polymerase alph... 1102 1.2e-111 1
UNIPROTKB|Q3T0A2 - symbol:PAPOLA "Poly(A) polymerase alph... 1102 1.2e-111 1
UNIPROTKB|F1PDS0 - symbol:PAPOLA "Uncharacterized protein... 1101 1.6e-111 1
UNIPROTKB|F1SAQ7 - symbol:PAPOLA "Uncharacterized protein... 1101 1.6e-111 1
UNIPROTKB|I3L6F0 - symbol:PAPOLA "Uncharacterized protein... 1101 1.6e-111 1
UNIPROTKB|A5D7N5 - symbol:PAPOLG "Uncharacterized protein... 1100 2.0e-111 1
UNIPROTKB|G3XAH6 - symbol:PAPOLA "Poly(A) polymerase alph... 1100 2.0e-111 1
UNIPROTKB|P51003 - symbol:PAPOLA "Poly(A) polymerase alph... 1100 2.0e-111 1
FB|FBgn0015949 - symbol:hrg "hiiragi" species:7227 "Droso... 1058 2.1e-111 2
MGI|MGI:1932115 - symbol:Papolb "poly (A) polymerase beta... 1074 4.3e-111 2
UNIPROTKB|F1SQL7 - symbol:PAPOLG "Uncharacterized protein... 1096 5.3e-111 1
UNIPROTKB|I3LRR6 - symbol:PAPOLB "Uncharacterized protein... 1089 2.9e-110 1
UNIPROTKB|J9NS30 - symbol:PAPOLG "Uncharacterized protein... 1087 4.8e-110 1
UNIPROTKB|Q9NRJ5 - symbol:PAPOLB "Poly(A) polymerase beta... 1083 1.3e-109 1
RGD|1310946 - symbol:Papolb "poly (A) polymerase beta (te... 1069 3.9e-108 1
UNIPROTKB|F1NL95 - symbol:F1NL95 "Uncharacterized protein... 1050 4.0e-106 1
UNIPROTKB|F1P3A1 - symbol:F1P3A1 "Uncharacterized protein... 1050 4.0e-106 1
WB|WBGene00009658 - symbol:F43G6.5 species:6239 "Caenorha... 1024 2.3e-103 1
POMBASE|SPBC646.04 - symbol:pla1 "poly(A) polymerase Pla1... 1003 3.8e-101 1
WB|WBGene00011791 - symbol:T15H9.6 species:6239 "Caenorha... 996 2.1e-100 1
UNIPROTKB|Q09995 - symbol:T15H9.6 "Protein T15H9.6" speci... 996 2.1e-100 1
WB|WBGene00012528 - symbol:pap-1 species:6239 "Caenorhabd... 974 4.5e-98 1
UNIPROTKB|Q9U2P3 - symbol:pap-1 "Protein PAP-1" species:6... 974 4.5e-98 1
CGD|CAL0002451 - symbol:PAP1 species:5476 "Candida albica... 933 1.4e-95 2
UNIPROTKB|Q9UW26 - symbol:PAPA "Poly(A) polymerase PAPa" ... 933 1.4e-95 2
SGD|S000001710 - symbol:PAP1 "Poly(A) polymerase, one of ... 939 2.3e-94 1
GENEDB_PFALCIPARUM|PFF1240w - symbol:PFF1240w "poly(A) po... 774 2.3e-93 2
UNIPROTKB|C6KT92 - symbol:PFF1240w "Poly(A) polymerase PA... 774 2.3e-93 2
RGD|1308673 - symbol:Papola "poly (A) polymerase alpha" s... 836 1.9e-89 2
UNIPROTKB|F1NDP1 - symbol:PAPOLA "Uncharacterized protein... 850 6.2e-85 1
UNIPROTKB|D4A764 - symbol:Papola "Protein Papola" species... 752 1.7e-80 2
TAIR|locus:2084274 - symbol:PAPS3 "poly(A) polymerase 3" ... 688 9.2e-68 1
UNIPROTKB|F8WAT4 - symbol:PAPOLG "Poly(A) polymerase gamm... 651 7.6e-64 1
UNIPROTKB|H0YJ00 - symbol:PAPOLA "Poly(A) polymerase alph... 596 5.1e-58 1
UNIPROTKB|G3V2A0 - symbol:PAPOLA "Poly(A) polymerase alph... 453 1.7e-42 1
UNIPROTKB|H7C3W0 - symbol:PAPOLG "Poly(A) polymerase gamm... 333 2.7e-29 1
UNIPROTKB|G3V3I9 - symbol:PAPOLA "Poly(A) polymerase alph... 310 8.5e-27 1
UNIPROTKB|F1NDP2 - symbol:PAPOLA "Uncharacterized protein... 218 6.9e-17 1
UNIPROTKB|G3V457 - symbol:PAPOLA "Poly(A) polymerase alph... 216 1.1e-16 1
UNIPROTKB|G4N5I8 - symbol:MGG_06121 "Uncharacterized prot... 234 1.2e-15 1
UNIPROTKB|Q59G05 - symbol:PAPOLG "Poly(A) polymerase gamm... 177 4.6e-12 2
UNIPROTKB|F1PYB9 - symbol:PAPOLG "Uncharacterized protein... 176 3.3e-10 1
>TAIR|locus:2030943 [details] [associations]
symbol:PAPS1 "poly(A) polymerase 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006351 EMBL:AC034106
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
UniGene:At.26787 UniGene:At.73166 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500 BRENDA:2.7.7.19
EMBL:BT005990 EMBL:AY323906 EMBL:AK227446 IPI:IPI00540119
PIR:B86315 RefSeq:NP_173240.2 ProteinModelPortal:Q9LMT2 SMR:Q9LMT2
IntAct:Q9LMT2 STRING:Q9LMT2 PaxDb:Q9LMT2 PRIDE:Q9LMT2
EnsemblPlants:AT1G17980.1 GeneID:838378 KEGG:ath:AT1G17980
TAIR:At1g17980 InParanoid:Q9LMT2 OMA:WDTLFEP PhylomeDB:Q9LMT2
ProtClustDB:CLSN2680711 Genevestigator:Q9LMT2 Uniprot:Q9LMT2
Length = 713
Score = 2210 (783.0 bits), Expect = 4.8e-229, P = 4.8e-229
Identities = 412/512 (80%), Positives = 454/512 (88%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
NGQR G++EPIS+ GPT+ D+++TR+LEK+L+DV LYES+EEAV REEVLG LDQIVK W
Sbjct: 7 NGQRFGVSEPISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTW 66
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
+K ISRAKGLNDQLL EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRE DFFGEL
Sbjct: 67 IKTISRAKGLNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQ 126
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
+ML+EMPEVTELHPVPDAHVP+M FK +GVSIDLLYA+L LWVIPEDLD+SQDSILQNAD
Sbjct: 127 RMLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNAD 186
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
EQTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVA
Sbjct: 187 EQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVA 246
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNA+P++LVSRFFRV+ QW WPN + LC+ +EGSLGLQVWDPR NPKD+ H+MP
Sbjct: 247 RICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMP 306
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITPAYPCMNSSYNVS STLRIM EFQRG+EICEAME N+AD WDTLFEPF FFEAYK
Sbjct: 307 IITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKAD--WDTLFEPFAFFEAYK 364
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 424
NYL+IDISA N DDLR WKGWVESRLRQLTLKIERH + ML CHPHP DF D S+PL+CS
Sbjct: 365 NYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPLHCS 423
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 484
YFMGLQRKQGVP EGEQFDIR TV+EFK V+ YTL PGM+ISV H+ RR+LPNFVFP
Sbjct: 424 YFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFP 483
Query: 485 GGVRPSRPSKGTWDS-RRALERKVSSHTKPGA 515
GGVRPS SKGTWDS RR+ R S+ + P A
Sbjct: 484 GGVRPSHTSKGTWDSNRRSEHRNSSTSSAPAA 515
>TAIR|locus:2134113 [details] [associations]
symbol:nPAP "nuclear poly(a) polymerase" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS] [GO:0031123
"RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002687
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00656923
RefSeq:NP_001031779.1 UniGene:At.25084 ProteinModelPortal:F4JV63
SMR:F4JV63 PRIDE:F4JV63 EnsemblPlants:AT4G32850.8 GeneID:829421
KEGG:ath:AT4G32850 OMA:EDQLEWC PhylomeDB:F4JV63 Uniprot:F4JV63
Length = 765
Score = 1786 (633.8 bits), Expect = 4.1e-184, P = 4.1e-184
Identities = 348/592 (58%), Positives = 427/592 (72%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQIVK WVK+++
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ +G DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQH--WSSLFEQYMFFEAYKNYLQV 379
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 428
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 489 PSRPSKG-TWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 547
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 548 F--REGXXXXXXXXXXXXNLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
E NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>TAIR|locus:2043560 [details] [associations]
symbol:PAPS2 "poly(A) polymerase 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006351 GO:GO:0003723 EMBL:AC005395
GO:GO:0004652 GO:GO:0043631 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AF255297 EMBL:AY039974 EMBL:AY074533 IPI:IPI00518420
PIR:E84653 RefSeq:NP_565611.1 UniGene:At.14867 SMR:O82312
IntAct:O82312 STRING:O82312 EnsemblPlants:AT2G25850.2 GeneID:817127
KEGG:ath:AT2G25850 TAIR:At2g25850 InParanoid:O82312 OMA:MGSESIN
ProtClustDB:CLSN2688428 BRENDA:2.7.7.19 Genevestigator:O82312
Uniprot:O82312
Length = 800
Score = 1748 (620.4 bits), Expect = 4.3e-180, P = 4.3e-180
Identities = 336/548 (61%), Positives = 412/548 (75%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GITEP+S+AGP+ D+ R +LEK+L D LYES+EE + REEV+ R+DQIVK WVK+++
Sbjct: 24 GITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLT 83
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
R +G DQ++++ANA IFTFGSYRLGVHGP ADIDTLCVGP + REEDFF +L E
Sbjct: 84 RQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAE 143
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVR
Sbjct: 144 MEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVR 203
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ
Sbjct: 204 SLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQF 263
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPA
Sbjct: 264 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPA 323
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++
Sbjct: 324 YPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQH--WSSLFQQYMFFEAYKNYLQV 381
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 428
D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C++FMG
Sbjct: 382 DVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMG 441
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G +
Sbjct: 442 LQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYK 501
Query: 489 PSRPSKG-TWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHL----RNAKC--H--- 538
SR S+ + R + V S + KRK D+ +++ + A C H
Sbjct: 502 RSRQSRHQSQQCREPGDEGVGS-LSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLD 560
Query: 539 ATMPSSSG 546
A P SSG
Sbjct: 561 AASPDSSG 568
>DICTYBASE|DDB_G0288259 [details] [associations]
symbol:papA "poly(A) polymerase" species:44689
"Dictyostelium discoideum" [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA;ISS;IBA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
dictyBase:DDB_G0288259 GO:GO:0005524 GO:GO:0046872 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003723
EMBL:AAFI02000109 GO:GO:0005847 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 HSSP:P25500
RefSeq:XP_636814.1 ProteinModelPortal:Q54J73 STRING:Q54J73
EnsemblProtists:DDB0216279 GeneID:8626531 KEGG:ddi:DDB_G0288259
OMA:NINESST ProtClustDB:PTZ00418 Uniprot:Q54J73
Length = 809
Score = 1234 (439.4 bits), Expect = 1.3e-125, P = 1.3e-125
Identities = 262/543 (48%), Positives = 341/543 (62%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+TEPIS A P+ D + +LE L NL+ES EE+ REE+LG+L+QIV+ W K++
Sbjct: 53 LGVTEPISTAPPSSIDFKLSTELENTLISFNLFESPEESRKREEILGKLNQIVREWAKQV 112
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S KG +Q E AKIFTFGSYRLGVHGPG+DIDTLCVGP+H R DFF +L +L
Sbjct: 113 SLKKGYPEQTASEVVAKIFTFGSYRLGVHGPGSDIDTLCVGPKHIMRS-DFFDDLSDILK 171
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQT 187
PE+TE V DA VPV+ FSG+ IDL+YA+L+L IPE+L D+ +S L+N DE++
Sbjct: 172 VHPEITEFTTVKDAFVPVITMVFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNIDEKS 231
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
+ SLNGCRVTDQIL+LVP I NFR LRC++ WA RRG+YSN+ GFLGG++WALL ARIC
Sbjct: 232 ILSLNGCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTARIC 291
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMPII 306
QLYPN+ PS ++ RFF+VY W+WP P+LLC I+EG LG +VW+P+R DK HLMPII
Sbjct: 292 QLYPNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPKR---DKAHLMPII 348
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP MNS+YNVS STL++M EF RG EI +E E W L E FF Y Y
Sbjct: 349 TPAYPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIETGECT--WKNLLEKCDFFTRYSFY 406
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK----SKP-- 420
+ ID + N +D R W+GW+ES+LR L +E T M P+P F++ + P
Sbjct: 407 IEIDCYSMNEEDSRKWEGWIESKLRFLISNLES-TPKMKFAVPYPKGFTNNLHKANNPDQ 465
Query: 421 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRN 477
+ S+FMGL G + D+ V EF + + +P M I V ++ ++
Sbjct: 466 ICTSFFMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQ 525
Query: 478 LPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKC 537
LP FV G P P K T +K SS +P A ++K +N D L + K
Sbjct: 526 LPAFVKDEG--PEEPVKTT--------KKRSSTGEPSAT---RKKLKSENSDNKLNSPKS 572
Query: 538 HAT 540
T
Sbjct: 573 PIT 575
>ZFIN|ZDB-GENE-030131-3507 [details] [associations]
symbol:papola "poly(A) polymerase alpha"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0031123 "RNA 3'-end
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 ZFIN:ZDB-GENE-030131-3507 GO:GO:0005634
GO:GO:0005737 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 EMBL:AL953887 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 GeneTree:ENSGT00390000017928
HOGENOM:HOG000204376 HOVERGEN:HBG053502 IPI:IPI00860939
RefSeq:NP_991321.2 UniGene:Dr.25690 SMR:Q5SNY2
Ensembl:ENSDART00000053858 GeneID:404041 KEGG:dre:404041
NextBio:20817515 Uniprot:Q5SNY2
Length = 723
Score = 1123 (400.4 bits), Expect = 2.9e-116, Sum P(2) = 2.9e-116
Identities = 232/503 (46%), Positives = 323/503 (64%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + DL+ TRKL + LR ++E + E R VLG+L+ +VK W++++S
Sbjct: 20 GITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVS 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
AK + ++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++ L E
Sbjct: 80 EAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKE 138
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D + +R
Sbjct: 139 QEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIR 198
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 258
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPIITPA
Sbjct: 259 YPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPA 318
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST IM++EF+RG I + + +N+AD W LFE FF+ YK+Y+ +
Sbjct: 319 YPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKAD--WSKLFEAPNFFQKYKHYIVL 376
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA+ W G VES++R L +E++ + L Q P P + +DK +
Sbjct: 377 LASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGPKEGNDKEE-FSTM 435
Query: 425 YFMGL--QRKQGVP-VGEGEQFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 480
+ +G+ ++ +G + FDI+ T ++QA++ + M+I+ HV R+ L
Sbjct: 436 WVIGIVFKKMEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQD-MKITAMHVKRKQLHQ 494
Query: 481 FVFPGGVRPSRPSKGTWDSRRAL 503
+ + S+ K + D RA+
Sbjct: 495 LLPEVAIHRSK-RKHSSDGVRAM 516
Score = 43 (20.2 bits), Expect = 2.9e-116, Sum P(2) = 2.9e-116
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 588 TDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSK-DAEKLAIEK 637
T ++G + ++H VDG + KG + S S +EK E+
Sbjct: 560 TSELQGKTEATGENTHLASVDGTSSSNASGKGAAPPQSTSPIQSEKKPSEQ 610
>UNIPROTKB|Q9BWT3 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634 EMBL:CH471053
GO:GO:0046872 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
EMBL:AY029162 EMBL:AF312211 EMBL:AJ308101 EMBL:AK021867
EMBL:AK023544 EMBL:AK314663 EMBL:BC111701 EMBL:BC113747
IPI:IPI00304442 RefSeq:NP_075045.2 UniGene:Hs.387471
ProteinModelPortal:Q9BWT3 SMR:Q9BWT3 STRING:Q9BWT3
PhosphoSite:Q9BWT3 DMDM:116242699 PaxDb:Q9BWT3 PRIDE:Q9BWT3
Ensembl:ENST00000238714 GeneID:64895 KEGG:hsa:64895 UCSC:uc002sai.3
CTD:64895 GeneCards:GC02P060983 HGNC:HGNC:14982 HPA:CAB017795
neXtProt:NX_Q9BWT3 PharmGKB:PA32934 InParanoid:Q9BWT3 OMA:IDGSSKR
OrthoDB:EOG4R23T8 PhylomeDB:Q9BWT3 GenomeRNAi:64895 NextBio:67037
ArrayExpress:Q9BWT3 Bgee:Q9BWT3 CleanEx:HS_PAPOLG
Genevestigator:Q9BWT3 GermOnline:ENSG00000115421 Uniprot:Q9BWT3
Length = 736
Score = 1096 (390.9 bits), Expect = 3.3e-115, Sum P(2) = 3.3e-115
Identities = 220/501 (43%), Positives = 314/501 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+ +S
Sbjct: 20 GITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVS 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 80 ESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKH 138
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVSTST +M++EF++G + + + + ++D W L EP FF+ Y++Y+ +
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVL 376
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-Y 425
SA ++ W G VES++R L +ER+ + + +P PG+ Y S +
Sbjct: 377 TASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMW 436
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNF 481
F+G+ ++ V E D+ ++ F V + + K GM+I HV ++ L ++
Sbjct: 437 FLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHY 495
Query: 482 VFPGGVRPSRPSKGTWDSRRA 502
+ P + + + D R+
Sbjct: 496 L-PAEILQKKKKQSLSDVNRS 515
Score = 60 (26.2 bits), Expect = 3.3e-115, Sum P(2) = 3.3e-115
Identities = 21/83 (25%), Positives = 35/83 (42%)
Query: 571 DANELAG---SNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNS 627
D N +G S R ++++ DS R + N +S K D P +G+ NS
Sbjct: 511 DVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETER--------NS 562
Query: 628 KDAEKLAIEKIMSGPYVADQAFP 650
+ + +EK +S P + P
Sbjct: 563 AEPAAVIVEKPLSVPPAQGLSIP 585
>ZFIN|ZDB-GENE-040426-1256 [details] [associations]
symbol:papolg "poly(A) polymerase gamma"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
ZFIN:ZDB-GENE-040426-1256 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:64895 EMBL:BC056818
IPI:IPI00492667 RefSeq:NP_956915.1 UniGene:Dr.79169
ProteinModelPortal:Q6PGV5 SMR:Q6PGV5 STRING:Q6PGV5 PRIDE:Q6PGV5
GeneID:393593 KEGG:dre:393593 InParanoid:Q6PGV5 NextBio:20814613
ArrayExpress:Q6PGV5 Bgee:Q6PGV5 Uniprot:Q6PGV5
Length = 744
Score = 1135 (404.6 bits), Expect = 3.9e-115, P = 3.9e-115
Identities = 230/502 (45%), Positives = 321/502 (63%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G + GIT ISLA P + D + T+KL + ++ ++E ++E R VLG+L+ V
Sbjct: 14 GQQPRKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFV 73
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K W+ +IS +K L + KIFTFGSYRLGVH GADID LCV PRH R DFF
Sbjct: 74 KEWISEISESKNLPPSAVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFS 132
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
+ L E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DS+L+
Sbjct: 133 SFFEKLKRHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLR 192
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D + +RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAM 252
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YH
Sbjct: 253 LVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYH 312
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS+YNVSTST IM +EF+ G + + + + +AD W LFEP FF+
Sbjct: 313 LMPIITPAYPQQNSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKAD--WSKLFEPPNFFQ 370
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKS 418
Y++Y+ + SA ++ W G VES++R L +ER+ Y + +P PG +++
Sbjct: 371 QYRHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRN 430
Query: 419 KPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 473
+ + S +F+G+ K+ + + D+ ++ F V S + K GM I HV
Sbjct: 431 ENDFVSMWFIGISFKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHV 489
Query: 474 TRRNLPNFVFPGGVRPSRPSKG 495
++ L +++ P V+ + S G
Sbjct: 490 KKKQLHHYLPPELVQRKKKSLG 511
>MGI|MGI:2442119 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:2442119 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DQ103505 EMBL:AK035810 EMBL:AL662810 EMBL:BC059271
IPI:IPI00317437 RefSeq:NP_766143.2 UniGene:Mm.470599 HSSP:P25500
ProteinModelPortal:Q6PCL9 SMR:Q6PCL9 PhosphoSite:Q6PCL9
PaxDb:Q6PCL9 PRIDE:Q6PCL9 Ensembl:ENSMUST00000020513 GeneID:216578
KEGG:mmu:216578 UCSC:uc007ifp.2 InParanoid:Q6PCL9 NextBio:375224
Bgee:Q6PCL9 CleanEx:MM_PAPOLG Genevestigator:Q6PCL9
GermOnline:ENSMUSG00000020273 Uniprot:Q6PCL9
Length = 739
Score = 1094 (390.2 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
Identities = 234/546 (42%), Positives = 329/546 (60%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+ IS
Sbjct: 20 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDIS 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 80 ESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKH 138
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVSTST +M++EF++G + + + + ++D W L EP FF+ Y++Y+ +
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVL 376
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-Y 425
SA ++ W G VES++R L +ER+ + + +P PG+ Y S +
Sbjct: 377 TASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYVSMW 436
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNF 481
F+G+ ++ V E D+ ++ F V + + K GM+I HV ++ L ++
Sbjct: 437 FLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHY 495
Query: 482 VFPGGVRPSRPSKGTWDSRRA---LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCH 538
+ P + + K D R+ L+ K SS D R TD N+
Sbjct: 496 L-PAEILQKK-KKSLSDVSRSSGGLQSKRSSLDSTCLDSSR---DTDSGTPF---NSPVS 547
Query: 539 ATMPSS 544
A PS+
Sbjct: 548 ANKPSN 553
Score = 39 (18.8 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 581 EKVENNLTDSIRGS------RNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLA 634
+K + +L+D R S R+S++ + + D G P N +S N ++ D+
Sbjct: 502 QKKKKSLSDVSRSSGGLQSKRSSLDSTCLDSSRDTDS-GTPFNSPVSANKPSNPDSPTGE 560
Query: 635 IEKIMSGP 642
IE+ + P
Sbjct: 561 IERSSAEP 568
>RGD|1310337 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310337 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
CTD:64895 OrthoDB:EOG4R23T8 EMBL:CH473996 IPI:IPI00365079
RefSeq:NP_001100714.1 UniGene:Rn.27992 Ensembl:ENSRNOT00000008919
GeneID:305586 KEGG:rno:305586 UCSC:RGD:1310337 NextBio:654829
Uniprot:D3ZAN6
Length = 739
Score = 1093 (389.8 bits), Expect = 1.1e-112, Sum P(2) = 1.1e-112
Identities = 229/521 (43%), Positives = 321/521 (61%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+ IS
Sbjct: 20 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDIS 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 80 ESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKH 138
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
V L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +R
Sbjct: 139 QDGVRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVSTST +M++EF++G + + + + ++D W L EP FF+ Y++Y+ +
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVL 376
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-Y 425
SA ++ W G VES++R L +ER+ + + +P PG+ Y S +
Sbjct: 377 TASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYVSMW 436
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNF 481
F+G+ ++ V E D+ ++ F V + + K GM+I HV ++ L ++
Sbjct: 437 FLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHY 495
Query: 482 VFPGGVRPSRPSKGTWDSRRA---LERKVSSHTKPGADDGR 519
+ P + + K D R+ L+ K SS D R
Sbjct: 496 L-PAEILQKK-KKSLSDVSRSSGGLQSKRSSLDSNCLDSSR 534
Score = 39 (18.8 bits), Expect = 1.1e-112, Sum P(2) = 1.1e-112
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 481 FVFPGGV-RPSRPSKGTWDSRRA 502
F PG +PS P T D+ R+
Sbjct: 542 FNSPGSAHKPSNPDSPTGDAERS 564
>UNIPROTKB|F1NKG9 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006378 "mRNA polyadenylation" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:AADN02003685
IPI:IPI00820771 RefSeq:NP_001185530.1 UniGene:Gga.4316
Ensembl:ENSGALT00000037556 GeneID:395878 KEGG:gga:395878
NextBio:20815945 ArrayExpress:F1NKG9 Uniprot:F1NKG9
Length = 737
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 228/486 (46%), Positives = 308/486 (63%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D M T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 20 GITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREIS 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++ L +
Sbjct: 80 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQ 138
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 139 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 198
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 258
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 259 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A+ W LFE FF+ YK+Y+ +
Sbjct: 319 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVL 376
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSY--- 425
SA W G VES++R L +E++ + L H +P F + K P Y
Sbjct: 377 LASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITL-AHVNPQSFPAPKENPDKEEYRTM 435
Query: 426 -FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL-- 478
+GL K+ E D+ ++ F V + M+I+ HV R+ L
Sbjct: 436 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQLHQ 494
Query: 479 --PNFV 482
PN V
Sbjct: 495 LLPNHV 500
>MGI|MGI:109301 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0006369 "termination of
RNA polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:109301 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000287 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OMA:SPVTTQG OrthoDB:EOG4J6RQB ChiTaRS:PAPOLA
EMBL:U52197 EMBL:U58134 EMBL:U58135 EMBL:AB086650 IPI:IPI00224655
IPI:IPI00224656 IPI:IPI00266738 IPI:IPI00467146 RefSeq:NP_035242.1
UniGene:Mm.255877 ProteinModelPortal:Q61183 SMR:Q61183
STRING:Q61183 PhosphoSite:Q61183 PaxDb:Q61183 PRIDE:Q61183
DNASU:18789 Ensembl:ENSMUST00000021535 Ensembl:ENSMUST00000109901
Ensembl:ENSMUST00000166735 GeneID:18789 KEGG:mmu:18789
UCSC:uc007oyv.1 UCSC:uc007oyx.1 InParanoid:Q61183 NextBio:295064
Bgee:Q61183 CleanEx:MM_PAPOLA Genevestigator:Q61183
GermOnline:ENSMUSG00000021111 Uniprot:Q61183
Length = 739
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 227/496 (45%), Positives = 308/496 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A+ W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 424
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDREEFRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPN 480
+ +GL K+ E D+ ++ F V + M+I+ HV R+ L
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQ 495
Query: 481 FVFPGGVRPSRPSKGT 496
+ P V R T
Sbjct: 496 LL-PSHVLQKRKKHST 510
>UNIPROTKB|G3MYA2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:DAAA02053163
Ensembl:ENSBTAT00000063150 Uniprot:G3MYA2
Length = 718
Score = 1102 (393.0 bits), Expect = 1.2e-111, P = 1.2e-111
Identities = 226/496 (45%), Positives = 308/496 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A+ W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 424
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPN 480
+ +GL K+ E D+ ++ F V + M+I+ HV R+ L
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQ 495
Query: 481 FVFPGGVRPSRPSKGT 496
+ P V + T
Sbjct: 496 LL-PSHVLQKKKKHST 510
>UNIPROTKB|P25500 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IDA] [GO:0000287
"magnesium ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0043631 "RNA polyadenylation"
evidence=IDA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000287 GO:GO:0006378 GO:GO:0003723
GO:GO:0030145 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 EMBL:X61585
EMBL:X63436 IPI:IPI00686724 IPI:IPI00699231 PIR:S17875 PIR:S17925
PIR:S18642 RefSeq:NP_788820.1 UniGene:Bt.109586 PDB:1F5A PDB:1Q78
PDB:1Q79 PDBsum:1F5A PDBsum:1Q78 PDBsum:1Q79
ProteinModelPortal:P25500 SMR:P25500 STRING:P25500
Ensembl:ENSBTAT00000005300 GeneID:338051 KEGG:bta:338051 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 InParanoid:P25500 OMA:SPVTTQG
EvolutionaryTrace:P25500 NextBio:20812502 ArrayExpress:P25500
Uniprot:P25500
Length = 739
Score = 1102 (393.0 bits), Expect = 1.2e-111, P = 1.2e-111
Identities = 226/496 (45%), Positives = 308/496 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A+ W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 424
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPN 480
+ +GL K+ E D+ ++ F V + M+I+ HV R+ L
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQ 495
Query: 481 FVFPGGVRPSRPSKGT 496
+ P V + T
Sbjct: 496 LL-PSHVLQKKKKHST 510
>UNIPROTKB|Q3T0A2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003 UniGene:Bt.109586
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OrthoDB:EOG4J6RQB EMBL:DAAA02053163
EMBL:BC102481 IPI:IPI00705304 SMR:Q3T0A2 STRING:Q3T0A2
Ensembl:ENSBTAT00000021001 Uniprot:Q3T0A2
Length = 693
Score = 1102 (393.0 bits), Expect = 1.2e-111, P = 1.2e-111
Identities = 226/496 (45%), Positives = 308/496 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A+ W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 424
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPN 480
+ +GL K+ E D+ ++ F V + M+I+ HV R+ L
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQ 495
Query: 481 FVFPGGVRPSRPSKGT 496
+ P V + T
Sbjct: 496 LL-PSHVLQKKKKHST 510
>UNIPROTKB|F1PDS0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IBA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0005737 GO:GO:0006378 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 OMA:SPVTTQG
EMBL:AAEX03005970 EMBL:AAEX03005971 Ensembl:ENSCAFT00000028221
Uniprot:F1PDS0
Length = 745
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 226/486 (46%), Positives = 306/486 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 27 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 86
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 87 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 145
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 146 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 205
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 206 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 265
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 266 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 325
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A+ W LFE FF+ YK+Y+ +
Sbjct: 326 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVL 383
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 424
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 384 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTM 442
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL-- 478
+ +GL K+ E D+ ++ F V + M+I+ HV R+ L
Sbjct: 443 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQ 501
Query: 479 --PNFV 482
PN V
Sbjct: 502 LLPNHV 507
>UNIPROTKB|F1SAQ7 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:CT827800
Ensembl:ENSSSCT00000002783 Uniprot:F1SAQ7
Length = 693
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 226/486 (46%), Positives = 306/486 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A+ W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 424
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL-- 478
+ +GL K+ E D+ ++ F V + M+I+ HV R+ L
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQ 495
Query: 479 --PNFV 482
PN V
Sbjct: 496 LLPNHV 501
>UNIPROTKB|I3L6F0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:CT827800
Ensembl:ENSSSCT00000027948 Uniprot:I3L6F0
Length = 734
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 226/486 (46%), Positives = 306/486 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 37 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 96
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 97 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 155
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 156 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 215
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 216 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 275
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 276 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 335
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A+ W LFE FF+ YK+Y+ +
Sbjct: 336 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVL 393
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 424
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 394 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTM 452
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL-- 478
+ +GL K+ E D+ ++ F V + M+I+ HV R+ L
Sbjct: 453 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQ 511
Query: 479 --PNFV 482
PN V
Sbjct: 512 LLPNHV 517
>UNIPROTKB|A5D7N5 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DAAA02031008 EMBL:DAAA02031009 EMBL:BC140625 IPI:IPI00695296
RefSeq:NP_001091535.1 UniGene:Bt.24299 SMR:A5D7N5
Ensembl:ENSBTAT00000009749 GeneID:529071 KEGG:bta:529071
InParanoid:A5D7N5 NextBio:20874959 Uniprot:A5D7N5
Length = 740
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 229/542 (42%), Positives = 330/542 (60%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+ ++S
Sbjct: 20 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEVS 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 80 ESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKH 138
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
+ L V DA VPV+KF+F G+ IDL++ARL++ I E+LD+ DS L++ D + +R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIR 198
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVSTST +M++EF++G + + + + ++D W L EP FF+ Y++Y+ +
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVL 376
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-Y 425
SA ++ W G VES++R L +ER+ + + +P PG+ Y S +
Sbjct: 377 TASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMW 436
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNF 481
F+G+ ++ V E D+ ++ F V + + K GM+I HV ++ L ++
Sbjct: 437 FLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHY 495
Query: 482 VFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM 541
+ P + + + D R+ S + ++ + TD+ +T N+ A
Sbjct: 496 L-PAEILQKKKKQSLSDVTRSSSGPQSKRSSLDSNCLDSSRDTDN--ETPF-NSPVSANK 551
Query: 542 PS 543
PS
Sbjct: 552 PS 553
>UNIPROTKB|G3XAH6 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 EMBL:AL163051
Gene3D:3.30.70.590 SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3XAH6 SMR:G3XAH6 Ensembl:ENST00000392990
ArrayExpress:G3XAH6 Bgee:G3XAH6 Uniprot:G3XAH6
Length = 724
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 226/486 (46%), Positives = 306/486 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A+ W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 424
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL-- 478
+ +GL K+ E D+ ++ F V + M+I+ HV R+ L
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQ 495
Query: 479 --PNFV 482
PN V
Sbjct: 496 LLPNHV 501
>UNIPROTKB|P51003 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IBA] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006378 "mRNA
polyadenylation" evidence=NAS] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0043631 "RNA polyadenylation" evidence=ISS]
[GO:0000287 "magnesium ion binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0030145 "manganese ion binding"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0031124 "mRNA 3'-end processing"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005524 GO:GO:0005737 GO:GO:0005654 GO:GO:0000287
Reactome:REACT_1675 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0004652
Reactome:REACT_78 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 HOVERGEN:HBG053502 OMA:SPVTTQG
EMBL:BC000927 EMBL:BC036014 EMBL:BX248301 EMBL:BX248753
EMBL:BX161482 EMBL:X76770 IPI:IPI00384028 IPI:IPI01025082
RefSeq:NP_001238935.1 RefSeq:NP_001238936.1 RefSeq:NP_116021.2
UniGene:Hs.253726 ProteinModelPortal:P51003 SMR:P51003
DIP:DIP-27610N IntAct:P51003 MINT:MINT-125699 STRING:P51003
PhosphoSite:P51003 DMDM:59803092 PaxDb:P51003 PeptideAtlas:P51003
PRIDE:P51003 Ensembl:ENST00000216277 Ensembl:ENST00000557320
Ensembl:ENST00000557471 GeneID:10914 KEGG:hsa:10914 UCSC:uc001yfo.3
UCSC:uc001yfq.3 GeneCards:GC14P096969 HGNC:HGNC:14981 HPA:HPA001788
MIM:605553 neXtProt:NX_P51003 PharmGKB:PA32932 InParanoid:P51003
OrthoDB:EOG4J6RQB PhylomeDB:P51003 ChiTaRS:PAPOLA GenomeRNAi:10914
NextBio:41453 ArrayExpress:P51003 Bgee:P51003 CleanEx:HS_PAPOLA
Genevestigator:P51003 GermOnline:ENSG00000090060 Uniprot:P51003
Length = 745
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 226/486 (46%), Positives = 306/486 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A+ W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 424
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL-- 478
+ +GL K+ E D+ ++ F V + M+I+ HV R+ L
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQ 495
Query: 479 --PNFV 482
PN V
Sbjct: 496 LLPNHV 501
>FB|FBgn0015949 [details] [associations]
symbol:hrg "hiiragi" species:7227 "Drosophila melanogaster"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA;NAS] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HSSP:P25500 EMBL:AY113434 ProteinModelPortal:Q8MZ09
SMR:Q8MZ09 STRING:Q8MZ09 PaxDb:Q8MZ09 PRIDE:Q8MZ09
FlyBase:FBgn0015949 InParanoid:Q8MZ09 OrthoDB:EOG42547T ChiTaRS:HRG
ArrayExpress:Q8MZ09 Bgee:Q8MZ09 Uniprot:Q8MZ09
Length = 659
Score = 1058 (377.5 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 203/416 (48%), Positives = 282/416 (67%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+ +V
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+IS +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 259
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 260 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 319
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS++NVS ST ++++ EF RG I + + + W+ LFE +FF
Sbjct: 320 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGR--IPWERLFEAPSFFY 377
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 378 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLISNLERNPHIAL-AHVNPKCFEFK 432
Score = 62 (26.9 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 418 SKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAH 472
S P +CS +F+GL+ ++ E D+ +++ F + V M+ + K GM I H
Sbjct: 462 SAP-FCSMWFIGLEFERS----ENLNVDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARH 516
Query: 473 VTRRNLPNFVFPGGVRPSRPS 493
V R+ L ++ ++ R S
Sbjct: 517 VKRKQLSLYLDSDFLKRERKS 537
>MGI|MGI:1932115 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;ISA;IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IPI] [GO:0006369 "termination of RNA polymerase
II transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 MGI:MGI:1932115 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 GO:GO:0043631 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 CTD:56903 OMA:FPGGVAW OrthoDB:EOG4THVSN
EMBL:AF039957 EMBL:AB030729 IPI:IPI00230087 RefSeq:NP_064327.1
UniGene:Mm.441372 ProteinModelPortal:Q9WVP6 SMR:Q9WVP6
MINT:MINT-6167909 STRING:Q9WVP6 PhosphoSite:Q9WVP6 PaxDb:Q9WVP6
PRIDE:Q9WVP6 GeneID:56522 KEGG:mmu:56522 InParanoid:Q9WVP6
NextBio:312850 Bgee:Q9WVP6 CleanEx:MM_PAPOLB Genevestigator:Q9WVP6
Uniprot:Q9WVP6
Length = 641
Score = 1074 (383.1 bits), Expect = 4.3e-111, Sum P(2) = 4.3e-111
Identities = 223/489 (45%), Positives = 312/489 (63%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+ +VK W++
Sbjct: 18 KQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS ++ L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + N+A+ W LFE +FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAE--WSKLFEAPSFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + +DK +
Sbjct: 375 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-F 433
Query: 422 YCSYFMGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRN 477
+ +GL K+ + +DI+ T ++QA++ + + M+I+ H+ R+
Sbjct: 434 RTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINS-KMFEMDMKIAAMHLRRKE 492
Query: 478 L----PNFV 482
L PN V
Sbjct: 493 LHQLLPNHV 501
Score = 43 (20.2 bits), Expect = 4.3e-111, Sum P(2) = 4.3e-111
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 584 ENNLTDSIRGSRNSVEVSSHNGKVD-GPMIGDPRNK 618
+++L SI S NS+ S G + GP+ G+P+ +
Sbjct: 520 DSSLLLSI-DSENSMTAPSPTGTMKTGPLTGNPQGR 554
>UNIPROTKB|F1SQL7 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 CTD:64895 OMA:IDGSSKR EMBL:CU467691
RefSeq:XP_003125156.1 UniGene:Ssc.62549 Ensembl:ENSSSCT00000009186
GeneID:100523547 KEGG:ssc:100523547 Uniprot:F1SQL7
Length = 741
Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
Identities = 227/542 (41%), Positives = 328/542 (60%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+ ++S
Sbjct: 20 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEVS 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 80 ESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKH 138
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVSTST +M++EF++G + + + + ++D W L EP FF+ Y++Y+ +
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVL 376
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-Y 425
SA ++ W G VES++R L +ER+ + + +P PG+ Y S +
Sbjct: 377 TASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMW 436
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNF 481
F+G+ ++ V E D+ ++ F V + + K GM+I HV ++ L ++
Sbjct: 437 FLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHY 495
Query: 482 VFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM 541
+ P + + + D R+ S + ++ + TD+ N+ A
Sbjct: 496 L-PAEILQKKKKQSLSDVTRSSSGPQSKRSSLDSNCLDSSRDTDNGTPF---NSPVSANK 551
Query: 542 PS 543
PS
Sbjct: 552 PS 553
>UNIPROTKB|I3LRR6 [details] [associations]
symbol:PAPOLB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005783 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:FPGGVAW EMBL:CU928347
Ensembl:ENSSSCT00000031977 Uniprot:I3LRR6
Length = 636
Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
Identities = 227/497 (45%), Positives = 317/497 (63%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+R GI+ PISLA P + D + T+KL + L+ ++E +EE R +L +L+ +VK W++
Sbjct: 32 KRYGISSPISLAPPRETDCVLTQKLIETLKPFGVFEEEEELQRRILILEKLNYLVKEWIR 91
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 92 ELSESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 150
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 151 LKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 210
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 211 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWAMLVART 270
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 271 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 330
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + ++A+ W LFE +FF+ YK+Y
Sbjct: 331 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAE--WSKLFEAPSFFQKYKHY 388
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 389 IALLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPRESPDKEE-F 447
Query: 422 YCSYFMGL--QRKQGVPVGEGE-QFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRN 477
+ +GL +R + + + +DI+ T ++QAV+ + + M+I+ H+ R+
Sbjct: 448 RTMWVIGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNS-KMFEMDMKIAAMHLRRKE 506
Query: 478 L----PNFVFPGGVRPS 490
L PN V P PS
Sbjct: 507 LHQLLPNHVLPQKKTPS 523
>UNIPROTKB|J9NS30 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:IDGSSKR EMBL:AAEX03007549
Ensembl:ENSCAFT00000044895 Uniprot:J9NS30
Length = 813
Score = 1087 (387.7 bits), Expect = 4.8e-110, P = 4.8e-110
Identities = 219/501 (43%), Positives = 314/501 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+ +S
Sbjct: 20 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVS 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 80 ESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKH 138
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +R
Sbjct: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVT++IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVSTST +M++EF++G + + + + ++D W L EP FF+ Y++Y+ +
Sbjct: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVL 376
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-Y 425
SA ++ W G VES++R L +ER+ + + +P PG+ Y S +
Sbjct: 377 TASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMW 436
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNF 481
F+G+ ++ V E D+ ++ F V + + K GM+I HV ++ L ++
Sbjct: 437 FLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHY 495
Query: 482 VFPGGVRPSRPSKGTWDSRRA 502
+ P + + + D R+
Sbjct: 496 L-PAEILQKKKKQSLSDVSRS 515
>UNIPROTKB|Q9NRJ5 [details] [associations]
symbol:PAPOLB "Poly(A) polymerase beta" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0006378 GO:GO:0003723
EMBL:AC092610 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 EMBL:AF218840 EMBL:BC036653 IPI:IPI00024525
RefSeq:NP_064529.4 UniGene:Hs.487409 ProteinModelPortal:Q9NRJ5
SMR:Q9NRJ5 STRING:Q9NRJ5 PhosphoSite:Q9NRJ5 DMDM:18203318
PaxDb:Q9NRJ5 PRIDE:Q9NRJ5 DNASU:56903 Ensembl:ENST00000404991
GeneID:56903 KEGG:hsa:56903 CTD:56903 GeneCards:GC07M004897
HGNC:HGNC:15970 MIM:607436 neXtProt:NX_Q9NRJ5 PharmGKB:PA32933
InParanoid:Q9NRJ5 OMA:FPGGVAW OrthoDB:EOG4THVSN GenomeRNAi:56903
NextBio:62363 ArrayExpress:Q9NRJ5 Bgee:Q9NRJ5 CleanEx:HS_PAPOLB
Genevestigator:Q9NRJ5 Uniprot:Q9NRJ5
Length = 636
Score = 1083 (386.3 bits), Expect = 1.3e-109, P = 1.3e-109
Identities = 229/511 (44%), Positives = 321/511 (62%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
R G++ PISLA P + D + T++L + LR ++E +EE R VL +L+ +VK W+++
Sbjct: 19 RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIRE 78
Query: 68 ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
IS +K L +++ KIFTFGSYRLGVH GADID LCV P H R DFF + L
Sbjct: 79 ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 137
Query: 128 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 187
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 KLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 197
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR C
Sbjct: 198 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 257
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 307
QLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIIT
Sbjct: 258 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 317
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
PAYP NS+YNVS ST +M++EF++G I + ++A+ W LFE +FF+ YK+Y+
Sbjct: 318 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAE--WSKLFEAPSFFQKYKHYI 375
Query: 368 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSYF 426
+ SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 376 VLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFR 434
Query: 427 ------MGLQRKQGVPVGEGE-QFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 478
+GL++ + + +DI+ T ++QAV+ + + GM+I+ H+ R+ L
Sbjct: 435 TMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNS-KMFEMGMKITAMHLRRKEL 493
Query: 479 PNFVFPGGVRPSRPSKGTWDSRRALERKVSS 509
+ P V + + T + RR + SS
Sbjct: 494 HQLL-PHHVLQDKKAHST-EGRRLTDLNDSS 522
>RGD|1310946 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310946 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 EMBL:CH474012 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:56903
EMBL:BC079046 IPI:IPI00363752 RefSeq:NP_001012020.1
UniGene:Rn.210888 SMR:Q6AYH1 GeneID:304300 KEGG:rno:304300
UCSC:RGD:1310946 NextBio:652828 Genevestigator:Q6AYH1
Uniprot:Q6AYH1
Length = 642
Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
Identities = 223/489 (45%), Positives = 311/489 (63%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+ +VK W++
Sbjct: 19 KQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 78
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS ++ L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 79 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + N+A+ W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAE--WSKLFEAPSFFQKYKHY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 376 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEE-F 434
Query: 422 YCSYFMGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRN 477
+ +GL K+ + +DI+ T ++QA++ + + M+I+ H+ R+
Sbjct: 435 RTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINS-KMFEMDMKIAAMHLRRKE 493
Query: 478 L----PNFV 482
L PN V
Sbjct: 494 LHQLLPNHV 502
>UNIPROTKB|F1NL95 [details] [associations]
symbol:F1NL95 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008811
"chloramphenicol O-acetyltransferase activity" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00600779
Ensembl:ENSGALT00000012751 OMA:RYHVMPI Uniprot:F1NL95
Length = 748
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 204/451 (45%), Positives = 293/451 (64%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P D D + T+KL + + ++E +EE R VL +L+ +VK W+ ++
Sbjct: 20 GITSPISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNLVKEWIFELG 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ +IFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 80 ESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKH 138
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
E+ L V DA+VPV+KF+F G+ IDL++ARL + + ++LD+ DS L++ D + +R
Sbjct: 139 QEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIRCIR 198
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP +NF+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
+PNA+ S LV +FF ++++W WPNPVLL EE +L L VWDPR NP D+YH+MPIITPA
Sbjct: 259 HPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPA 318
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVSTST ++++E + G + + + +D W LFE FF+ YK+Y+ +
Sbjct: 319 YPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSD--WPKLFEQPNFFQKYKHYIVL 376
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-Y 425
S + W G VES++R L +ER+ + N+ +P PG+ + Y S +
Sbjct: 377 TASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYVSMW 436
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 456
F+G+ ++ + E + D+ ++ F AV
Sbjct: 437 FLGIIFRK-LESAESTKIDLTYDIQSFTDAV 466
>UNIPROTKB|F1P3A1 [details] [associations]
symbol:F1P3A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008811 "chloramphenicol
O-acetyltransferase activity" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00820385
Ensembl:ENSGALT00000040310 Uniprot:F1P3A1
Length = 738
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 204/451 (45%), Positives = 293/451 (64%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P D D + T+KL + + ++E +EE R VL +L+ +VK W+ ++
Sbjct: 20 GITSPISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNLVKEWIFELG 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ +IFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 80 ESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKH 138
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
E+ L V DA+VPV+KF+F G+ IDL++ARL + + ++LD+ DS L++ D + +R
Sbjct: 139 QEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIRCIR 198
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP +NF+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
+PNA+ S LV +FF ++++W WPNPVLL EE +L L VWDPR NP D+YH+MPIITPA
Sbjct: 259 HPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPA 318
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVSTST ++++E + G + + + +D W LFE FF+ YK+Y+ +
Sbjct: 319 YPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSD--WPKLFEQPNFFQKYKHYIVL 376
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-Y 425
S + W G VES++R L +ER+ + N+ +P PG+ + Y S +
Sbjct: 377 TASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYVSMW 436
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 456
F+G+ ++ + E + D+ ++ F AV
Sbjct: 437 FLGIIFRK-LESAESTKIDLTYDIQSFTDAV 466
>WB|WBGene00009658 [details] [associations]
symbol:F43G6.5 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
OMA:FPGGVAW HSSP:P25500 EMBL:Z50070 EMBL:AL032651 PIR:C88325
PIR:T22140 RefSeq:NP_496524.1 ProteinModelPortal:G5EBX5 SMR:G5EBX5
EnsemblMetazoa:F43G6.5 GeneID:174816 KEGG:cel:CELE_F43G6.5
CTD:174816 WormBase:F43G6.5 NextBio:885628 Uniprot:G5EBX5
Length = 554
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 222/541 (41%), Positives = 325/541 (60%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+++PIS A P DL T L+K L N YE QEE R +VL +L+ VK W++KI+
Sbjct: 20 GVSQPISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLNGCVKQWIQKIT 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
A+ DQL A ++ FGSYRLGVH GADIDTL + PRHATR DFF QML +
Sbjct: 80 EARYPKDQLFN-AGGQLMAFGSYRLGVHSSGADIDTLVLAPRHATRA-DFFSSFKQMLAK 137
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
PEVT L V +A VP+M K+SG+ ID L+ARL+L +PEDLDI D++L+N D+++VR
Sbjct: 138 DPEVTNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQESVR 197
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV + +L+LVP +NF TLR ++ WAK G+YSN GF GGI WA+LVAR CQL
Sbjct: 198 SLNGCRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQL 257
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ-----VWDPRRNPKDKYHLMP 304
YPNA PS L+ + F +++ W+WP PVLL I + L VWDPRRN D+YHLMP
Sbjct: 258 YPNASPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLMP 317
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
I+TPA+P NS++NVS S+++++ +E + C+ ++ + W L E FF YK
Sbjct: 318 IVTPAFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCN--WMDLLEEINFFSRYK 375
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 424
+++ + ++AE D + G+ ESR+RQL L +E++ L H +P F P
Sbjct: 376 HFISLSMTAETEKDELAFGGFFESRIRQLVLILEKNQGIKL-AHINPKKFKAAKDPKKSV 434
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFK-----QAVSMYTLRKP-GMQISVAHVTRRNL 478
+F+GLQ + V + D+ +++FK QA S+ + ++ ++V R +L
Sbjct: 435 WFIGLQFDENV-----KNLDLTKDIQQFKRNIDYQAKSVKDIEANCAVETDFSYVKRSDL 489
Query: 479 PNFVFPGGVRPSRPSKGTWDSRRAL--ERKVSSHTKPGADDGRKRKQTD-DNVDTHLRNA 535
+ ++ + K +S+ + +RKVS + P +K ++ +V++ L+N
Sbjct: 490 AQTISVKDLKQGKMYKKP-ESKDPVSKKRKVSENA-PSVPKKQKLDVSEKSSVESLLKNL 547
Query: 536 K 536
K
Sbjct: 548 K 548
>POMBASE|SPBC646.04 [details] [associations]
symbol:pla1 "poly(A) polymerase Pla1" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IGI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IGI] [GO:0006378 "mRNA polyadenylation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 PomBase:SPBC646.04 GO:GO:0005829
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0005847
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 OMA:FPGGVAW EMBL:X79705
EMBL:AB027883 PIR:JC6058 RefSeq:NP_595362.1
ProteinModelPortal:Q10295 SMR:Q10295 MINT:MINT-2730388
STRING:Q10295 EnsemblFungi:SPBC646.04.1 GeneID:2541099
KEGG:spo:SPBC646.04 OrthoDB:EOG4SR150 NextBio:20802212
Uniprot:Q10295
Length = 566
Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
Identities = 193/389 (49%), Positives = 271/389 (69%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PIS A T+ + L L++ NL+ES E+ R +VL L QI +VKK+S
Sbjct: 7 GITPPISTAPATEQENALNTALINELKNQNLFESPAESEKRVKVLDELQQITTEFVKKVS 66
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
AK +N+++ EA KIFT+GSYRLGV+GPG+DIDTL V P+H +R+ +FF +L ML E
Sbjct: 67 LAKHMNEKMANEAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSRD-NFFQDLEPMLRE 125
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EVT+L VPDA+VP++KFKF G+SIDL++ARLS+ +P DL++S +++L+ +E+ V
Sbjct: 126 REEVTDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEERCVL 185
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RVTDQIL+LVP F+ LR ++FWA+RR +Y+NV GF GG+ WA++VARICQL
Sbjct: 186 SLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARICQL 245
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV S++V++FFR+ QW WP P+LL IE+G L +++W+P+ P DK H MPIITPA
Sbjct: 246 YPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPA 305
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP M +++N++ ST I++ E R EI + + + W LF+ FF YK+YL I
Sbjct: 306 YPSMCATHNITLSTQTIILREMVRAGEIADQIMVKA--LPWSALFQKHDFFHRYKHYLTI 363
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIE 398
+A+ A+ W G VES+LR L ++E
Sbjct: 364 TAAAKTAEAQLKWAGLVESKLRHLVTRLE 392
>WB|WBGene00011791 [details] [associations]
symbol:T15H9.6 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
Identities = 215/530 (40%), Positives = 315/530 (59%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+++PIS A P +D+ T L+ L + +ES++E + R +VL LD +VK WV+K +
Sbjct: 15 GVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLVKDWVQKTT 74
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
++ DQ+ A K+ FGSYRLGVH GADID++ V PRH TR DFF +L +
Sbjct: 75 ISRIPKDQMFN-AGGKLIPFGSYRLGVHSSGADIDSIVVAPRHITRS-DFFNSFKDILAK 132
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
PEVTEL V A VP+M K+SGV ID+L+ARL+L +PEDL+I DS+L+N DE++VR
Sbjct: 133 NPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLDEESVR 192
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV +Q+L+LVP +NF TLR ++ WAK G+YSN GF GGI WA+LVARICQL
Sbjct: 193 SLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARICQL 252
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLL----C-AIEEGSLGLQVWDPRRNPKDKYHLMP 304
YPNA PS L+ + F +++ W WP PVLL C + L VWDPRRN D+YHLMP
Sbjct: 253 YPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMP 312
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITPA+P NS++NVS S+++++ DE ++ IC+ + +E ++W L E FF Y
Sbjct: 313 IITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKI--HEGTLEWRDLLEEINFFSKYH 370
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ-CHPHPGDFSDKSKPLYC 423
+++ + + AE+ + + G+ ESR+RQL +E++ ++Q +P F D P
Sbjct: 371 HFIALKLKAESVKEELAFGGFFESRIRQLVQILEKN--QVIQVAQINPRKFKDVKDPKKS 428
Query: 424 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISV--AHVTRRN 477
+F+GL+ V + D+ +++FK + ++ G Q+ + R N
Sbjct: 429 IWFIGLEFVANV-----KNVDLTSDIQQFKMNIDRQSMSVKEIAAGCQVETDFTYEKRSN 483
Query: 478 LPNFVFPGGVRPSRPSKGTWDSRRALE--RKVSSHTKPGADDGRKRKQTD 525
L N + + R K T S + R + H A +K+ + D
Sbjct: 484 LINIISKKDLSCQRIMKKTEVSVPVTKDSRNLKRHILDEAPTVQKKHKLD 533
>UNIPROTKB|Q09995 [details] [associations]
symbol:T15H9.6 "Protein T15H9.6" species:6239
"Caenorhabditis elegans" [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
Identities = 215/530 (40%), Positives = 315/530 (59%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+++PIS A P +D+ T L+ L + +ES++E + R +VL LD +VK WV+K +
Sbjct: 15 GVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLVKDWVQKTT 74
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
++ DQ+ A K+ FGSYRLGVH GADID++ V PRH TR DFF +L +
Sbjct: 75 ISRIPKDQMFN-AGGKLIPFGSYRLGVHSSGADIDSIVVAPRHITRS-DFFNSFKDILAK 132
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
PEVTEL V A VP+M K+SGV ID+L+ARL+L +PEDL+I DS+L+N DE++VR
Sbjct: 133 NPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLDEESVR 192
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV +Q+L+LVP +NF TLR ++ WAK G+YSN GF GGI WA+LVARICQL
Sbjct: 193 SLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARICQL 252
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLL----C-AIEEGSLGLQVWDPRRNPKDKYHLMP 304
YPNA PS L+ + F +++ W WP PVLL C + L VWDPRRN D+YHLMP
Sbjct: 253 YPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMP 312
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITPA+P NS++NVS S+++++ DE ++ IC+ + +E ++W L E FF Y
Sbjct: 313 IITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKI--HEGTLEWRDLLEEINFFSKYH 370
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ-CHPHPGDFSDKSKPLYC 423
+++ + + AE+ + + G+ ESR+RQL +E++ ++Q +P F D P
Sbjct: 371 HFIALKLKAESVKEELAFGGFFESRIRQLVQILEKN--QVIQVAQINPRKFKDVKDPKKS 428
Query: 424 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISV--AHVTRRN 477
+F+GL+ V + D+ +++FK + ++ G Q+ + R N
Sbjct: 429 IWFIGLEFVANV-----KNVDLTSDIQQFKMNIDRQSMSVKEIAAGCQVETDFTYEKRSN 483
Query: 478 LPNFVFPGGVRPSRPSKGTWDSRRALE--RKVSSHTKPGADDGRKRKQTD 525
L N + + R K T S + R + H A +K+ + D
Sbjct: 484 LINIISKKDLSCQRIMKKTEVSVPVTKDSRNLKRHILDEAPTVQKKHKLD 533
>WB|WBGene00012528 [details] [associations]
symbol:pap-1 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0006378
GO:GO:0010171 GO:GO:0040011 GO:GO:0048477 GO:GO:0006351
GO:GO:0003723 GO:GO:0040035 GO:GO:0040027 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
Identities = 209/503 (41%), Positives = 306/503 (60%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+++PISLA P D+ +T L + L+ YE +EE R EVL L+++VK WVK +
Sbjct: 12 LGVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNV 71
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ K N + + A K+FTFGSYRLGVH GADIDTL V PRH R DFF +ML
Sbjct: 72 TAMKIPNGEGVN-AGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLN 129
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P+ ++S D++L+N D+++V
Sbjct: 130 NDPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESV 189
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRV +Q+L+LVP+ + F TLR ++ WAK G+YSN GF GGI WA+LVAR CQ
Sbjct: 190 RSLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQ 249
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKYHLM 303
LYPNA PS LV R F +++ W WP+PV+L + +L VWDPRR D++H+M
Sbjct: 250 LYPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVM 309
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PIITPA+P NS++NV+ ST ++ +E EIC + + ++ W LFE FF Y
Sbjct: 310 PIITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSK--WTALFEEVNFFSRY 367
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH-----TYNMLQCH-PHPG---DF 414
K+++ + ++A N ++ N+ G++ESR+R L +ER+ +N H P P D
Sbjct: 368 KHFIALIMAAPNEEEELNYGGFLESRIRLLVQSLERNQDIIIAHNDPNKHKPSPNAKFDV 427
Query: 415 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM------QI 468
+ ++K + +F+GL+ + + D+ ++ FK V + G+ QI
Sbjct: 428 NPENKRVTV-WFIGLEFAE-----HAKTLDLTNEIQRFKTNVELQASNVKGIGPNCQVQI 481
Query: 469 SVAHVTRRNLPNFVFPGGVRPSR 491
+ +V R +L + +R R
Sbjct: 482 DMFYVKRNSLIQVISAADLRRGR 504
>UNIPROTKB|Q9U2P3 [details] [associations]
symbol:pap-1 "Protein PAP-1" species:6239 "Caenorhabditis
elegans" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
GO:GO:0006378 GO:GO:0010171 GO:GO:0040011 GO:GO:0048477
GO:GO:0006351 GO:GO:0003723 GO:GO:0040035 GO:GO:0040027
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HSSP:P25500 EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
Identities = 209/503 (41%), Positives = 306/503 (60%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+++PISLA P D+ +T L + L+ YE +EE R EVL L+++VK WVK +
Sbjct: 12 LGVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNV 71
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ K N + + A K+FTFGSYRLGVH GADIDTL V PRH R DFF +ML
Sbjct: 72 TAMKIPNGEGVN-AGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLN 129
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P+ ++S D++L+N D+++V
Sbjct: 130 NDPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESV 189
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRV +Q+L+LVP+ + F TLR ++ WAK G+YSN GF GGI WA+LVAR CQ
Sbjct: 190 RSLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQ 249
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKYHLM 303
LYPNA PS LV R F +++ W WP+PV+L + +L VWDPRR D++H+M
Sbjct: 250 LYPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVM 309
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PIITPA+P NS++NV+ ST ++ +E EIC + + ++ W LFE FF Y
Sbjct: 310 PIITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSK--WTALFEEVNFFSRY 367
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH-----TYNMLQCH-PHPG---DF 414
K+++ + ++A N ++ N+ G++ESR+R L +ER+ +N H P P D
Sbjct: 368 KHFIALIMAAPNEEEELNYGGFLESRIRLLVQSLERNQDIIIAHNDPNKHKPSPNAKFDV 427
Query: 415 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM------QI 468
+ ++K + +F+GL+ + + D+ ++ FK V + G+ QI
Sbjct: 428 NPENKRVTV-WFIGLEFAE-----HAKTLDLTNEIQRFKTNVELQASNVKGIGPNCQVQI 481
Query: 469 SVAHVTRRNLPNFVFPGGVRPSR 491
+ +V R +L + +R R
Sbjct: 482 DMFYVKRNSLIQVISAADLRRGR 504
>CGD|CAL0002451 [details] [associations]
symbol:PAP1 species:5476 "Candida albicans" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=IDA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IEA] [GO:0071050 "snoRNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 CGD:CAL0002451 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AACQ01000100 GO:GO:0044011 GO:GO:0004652
KO:K14376 EMBL:AF167162 EMBL:AB021667 RefSeq:XP_714613.1
ProteinModelPortal:Q9UW26 STRING:Q9UW26 GeneID:3643763
KEGG:cal:CaO19.3197 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 933 (333.5 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 185/414 (44%), Positives = 270/414 (65%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N Q G+T PIS+A T + L K L+ +ES+ R EVL L + + +
Sbjct: 2 NNQAYGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V K+S K +++ + ++ KIFTFGSYRLGV+GPG+DIDTL V P+H +R DFF +
Sbjct: 62 VYKVSIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFY 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L E+ E+ PVPDA VP++K +F+G+SIDL++ARL + +P DL + ++L+N D
Sbjct: 121 ELLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNID 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +R+LNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVA
Sbjct: 181 EKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 241 RICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N+++ST ++++ EFQRG E+ + N W L E FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYK 358
Query: 365 NYLRIDISAEN--ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
YL I + + A+ L+ + G VES+LR L K+E + HP+ F +
Sbjct: 359 FYLCIVAATRSTYAEHLK-YSGMVESKLRLLVQKLEL-VEGIELAHPYVKSFEN 410
Score = 37 (18.1 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 609 GPMIGDPRNKGL--SFNSSNSKDAEKLAIEKIMSGPYV 644
G GD R KG+ + N+ N+K+ + +E M+ ++
Sbjct: 428 GTSKGDDRVKGVLHAENNDNNKENVENKVELHMTKLFI 465
>UNIPROTKB|Q9UW26 [details] [associations]
symbol:PAPA "Poly(A) polymerase PAPa" species:237561
"Candida albicans SC5314" [GO:0003723 "RNA binding" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0006378 "mRNA polyadenylation" evidence=IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
CGD:CAL0002451 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 EMBL:AACQ01000100
GO:GO:0044011 GO:GO:0004652 KO:K14376 EMBL:AF167162 EMBL:AB021667
RefSeq:XP_714613.1 ProteinModelPortal:Q9UW26 STRING:Q9UW26
GeneID:3643763 KEGG:cal:CaO19.3197 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 933 (333.5 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 185/414 (44%), Positives = 270/414 (65%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N Q G+T PIS+A T + L K L+ +ES+ R EVL L + + +
Sbjct: 2 NNQAYGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V K+S K +++ + ++ KIFTFGSYRLGV+GPG+DIDTL V P+H +R DFF +
Sbjct: 62 VYKVSIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFY 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L E+ E+ PVPDA VP++K +F+G+SIDL++ARL + +P DL + ++L+N D
Sbjct: 121 ELLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNID 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +R+LNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVA
Sbjct: 181 EKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 241 RICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N+++ST ++++ EFQRG E+ + N W L E FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYK 358
Query: 365 NYLRIDISAEN--ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
YL I + + A+ L+ + G VES+LR L K+E + HP+ F +
Sbjct: 359 FYLCIVAATRSTYAEHLK-YSGMVESKLRLLVQKLEL-VEGIELAHPYVKSFEN 410
Score = 37 (18.1 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 609 GPMIGDPRNKGL--SFNSSNSKDAEKLAIEKIMSGPYV 644
G GD R KG+ + N+ N+K+ + +E M+ ++
Sbjct: 428 GTSKGDDRVKGVLHAENNDNNKENVENKVELHMTKLFI 465
>SGD|S000001710 [details] [associations]
symbol:PAP1 "Poly(A) polymerase, one of three factors
required for mRNA 3'-end pol" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IDA;IMP] [GO:0005654 "nucleoplasm" evidence=IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071050 "snoRNA polyadenylation"
evidence=IGI] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 SGD:S000001710 GO:GO:0005524
GO:GO:0000287 GO:GO:0006378 GO:GO:0006351 EMBL:BK006944
GO:GO:0003723 GO:GO:0005847 GO:GO:0004652 EMBL:X65124
RefSeq:NP_012929.4 GeneID:853873 KEGG:sce:YKR004C PDB:3C66
PDBsum:3C66 RefSeq:NP_012927.3 GeneID:853871 KEGG:sce:YKR002W
KO:K14376 GO:GO:0071050 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
OMA:FPGGVAW OrthoDB:EOG4SR150 EMBL:X60307 EMBL:Z28227 PIR:S19031
PDB:1FA0 PDB:2HHP PDB:2O1P PDB:2Q66 PDBsum:1FA0 PDBsum:2HHP
PDBsum:2O1P PDBsum:2Q66 ProteinModelPortal:P29468 SMR:P29468
DIP:DIP-2297N IntAct:P29468 MINT:MINT-375429 STRING:P29468
PaxDb:P29468 PeptideAtlas:P29468 EnsemblFungi:YKR002W CYGD:YKR002w
EvolutionaryTrace:P29468 NextBio:975142 Genevestigator:P29468
GermOnline:YKR002W Uniprot:P29468
Length = 568
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 195/457 (42%), Positives = 286/457 (62%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L ++ +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKS--WANLFEKNDFFFRY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPL 421
K YL I +D+ W G VES++R L +K+E + HP F S P
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLA-GIKIAHPFTKPFESSYCCPT 417
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 458
Y M +Q K G E ++L E K+ S+
Sbjct: 418 EDDYEM-IQDKYGSHKTETALNALKLVTDENKEEESI 453
>GENEDB_PFALCIPARUM|PFF1240w [details] [associations]
symbol:PFF1240w "poly(A) polymerase PAP,
putative" species:5833 "Plasmodium falciparum" [GO:0006378 "mRNA
polyadenylation" evidence=ISS] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 774 (277.5 bits), Expect = 2.3e-93, Sum P(2) = 2.3e-93
Identities = 152/338 (44%), Positives = 220/338 (65%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+TEPISL P+++D+ R+ + + L+ NL+E + RE VLG ++++ ++ ++S
Sbjct: 83 GVTEPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKLFHEFLIELS 142
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+G++++ + ++TFGSYRLGV P +DID + + P++ TRE FF E + L +
Sbjct: 143 INQGISEEEANNISGNLYTFGSYRLGVITPNSDIDCIFLAPQNLTREI-FFNEFYLKLQQ 201
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTV 188
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TV
Sbjct: 202 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTV 261
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNG RV D IL VP FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+ICQ
Sbjct: 262 RSLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQ 321
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMP 304
LYPN S L+ +FF+VY+ W W PVLL I+ EG VWDP +N KDK H+MP
Sbjct: 322 LYPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMP 381
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAME 342
IITPA+PCMNS++NV+ T I+++EF+R H I + ME
Sbjct: 382 IITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYME 419
Score = 175 (66.7 bits), Expect = 2.3e-93, Sum P(2) = 2.3e-93
Identities = 53/196 (27%), Positives = 92/196 (46%)
Query: 344 NEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN 403
N ++ W T+ EP F YK++L I I N +WKGW+ES++R L K+E T N
Sbjct: 444 NSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TIN 501
Query: 404 MLQCHPHPGD-FSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT- 460
L+ P P F K K YCS +F+ L P F++ +++F +
Sbjct: 502 ELKIRPFPKFYFYKKEKSYYCSSFFIALIFFYKNPYEN--TFNLSYAIRDFIDIALNWPQ 559
Query: 461 -LRKPG-MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDG 518
++ P +I++ + R + F+ ++ +K ++ ++ ++H + G +
Sbjct: 560 KVKYPNAFKINIMYQKRSQVLEFLDIVTKEENQKNKQVMENN---DKDETNHNQNGYRNN 616
Query: 519 RKRKQTDDNVDTHLRN 534
K KQ D+ D HL N
Sbjct: 617 HKNKQFDE-YDDHLFN 631
Score = 41 (19.5 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 565 LQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGK 606
L+F + E N++ +ENN D ++N ++H K
Sbjct: 580 LEFLDIVTKEENQKNKQVMENNDKDETNHNQNGYR-NNHKNK 620
>UNIPROTKB|C6KT92 [details] [associations]
symbol:PFF1240w "Poly(A) polymerase PAP, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=ISS;IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 774 (277.5 bits), Expect = 2.3e-93, Sum P(2) = 2.3e-93
Identities = 152/338 (44%), Positives = 220/338 (65%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+TEPISL P+++D+ R+ + + L+ NL+E + RE VLG ++++ ++ ++S
Sbjct: 83 GVTEPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKLFHEFLIELS 142
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+G++++ + ++TFGSYRLGV P +DID + + P++ TRE FF E + L +
Sbjct: 143 INQGISEEEANNISGNLYTFGSYRLGVITPNSDIDCIFLAPQNLTREI-FFNEFYLKLQQ 201
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTV 188
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TV
Sbjct: 202 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTV 261
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNG RV D IL VP FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+ICQ
Sbjct: 262 RSLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQ 321
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMP 304
LYPN S L+ +FF+VY+ W W PVLL I+ EG VWDP +N KDK H+MP
Sbjct: 322 LYPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMP 381
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAME 342
IITPA+PCMNS++NV+ T I+++EF+R H I + ME
Sbjct: 382 IITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYME 419
Score = 175 (66.7 bits), Expect = 2.3e-93, Sum P(2) = 2.3e-93
Identities = 53/196 (27%), Positives = 92/196 (46%)
Query: 344 NEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN 403
N ++ W T+ EP F YK++L I I N +WKGW+ES++R L K+E T N
Sbjct: 444 NSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TIN 501
Query: 404 MLQCHPHPGD-FSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT- 460
L+ P P F K K YCS +F+ L P F++ +++F +
Sbjct: 502 ELKIRPFPKFYFYKKEKSYYCSSFFIALIFFYKNPYEN--TFNLSYAIRDFIDIALNWPQ 559
Query: 461 -LRKPG-MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDG 518
++ P +I++ + R + F+ ++ +K ++ ++ ++H + G +
Sbjct: 560 KVKYPNAFKINIMYQKRSQVLEFLDIVTKEENQKNKQVMENN---DKDETNHNQNGYRNN 616
Query: 519 RKRKQTDDNVDTHLRN 534
K KQ D+ D HL N
Sbjct: 617 HKNKQFDE-YDDHLFN 631
Score = 41 (19.5 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 565 LQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGK 606
L+F + E N++ +ENN D ++N ++H K
Sbjct: 580 LEFLDIVTKEENQKNKQVMENNDKDETNHNQNGYR-NNHKNK 620
>RGD|1308673 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISO;IBA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0043631 "RNA polyadenylation" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0003723 GO:GO:0000398 GO:GO:0006369
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00567428
Ensembl:ENSRNOT00000047832 UCSC:RGD:1308673 ArrayExpress:F1MAC5
Uniprot:F1MAC5
Length = 681
Score = 836 (299.3 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 156/284 (54%), Positives = 202/284 (71%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 293
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
Score = 76 (31.8 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 36/157 (22%), Positives = 63/157 (40%)
Query: 350 WDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCH 408
WD FF + +++ +++ + R W G VES++R L +E++ + L H
Sbjct: 300 WDPRVSVL-FFPLQIHTVQLLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AH 357
Query: 409 PHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK 463
+P F + K P + +GL K+ E D+ ++ F V +
Sbjct: 358 VNPQSFPAPKESPDREEFRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS 416
Query: 464 P----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 496
M+I+ HV R+ L + P V R T
Sbjct: 417 KMFELDMKIAAMHVKRKQLHQLL-PSHVLQKRKKHST 452
>UNIPROTKB|F1NDP1 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
EMBL:AADN02003685 IPI:IPI00587050 Ensembl:ENSGALT00000018089
ArrayExpress:F1NDP1 Uniprot:F1NDP1
Length = 620
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 178/386 (46%), Positives = 240/386 (62%)
Query: 110 PRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIP 169
PRH R DFF ++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IP
Sbjct: 2 PRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP 60
Query: 170 EDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSN 229
EDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN
Sbjct: 61 EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSN 120
Query: 230 VAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQV 289
+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L V
Sbjct: 121 ILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPV 180
Query: 290 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD 349
WDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A+
Sbjct: 181 WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE-- 238
Query: 350 WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 409
W LFE FF+ YK+Y+ + SA W G VES++R L +E++ + L H
Sbjct: 239 WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITL-AHV 297
Query: 410 HPGDF-SDKSKPLYCSY----FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP 464
+P F + K P Y +GL K+ E D+ ++ F V +
Sbjct: 298 NPQSFPAPKENPDKEEYRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSK 356
Query: 465 ----GMQISVAHVTRRNL----PNFV 482
M+I+ HV R+ L PN V
Sbjct: 357 MFEMDMKIAARHVKRKQLHQLLPNHV 382
>UNIPROTKB|D4A764 [details] [associations]
symbol:Papola "Protein Papola" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590
SUPFAM:SSF55003 IPI:IPI00776821 Ensembl:ENSRNOT00000057215
ArrayExpress:D4A764 Uniprot:D4A764
Length = 657
Score = 752 (269.8 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 140/260 (53%), Positives = 185/260 (71%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQW 269
YPNA+ S LV +FF V+++W
Sbjct: 260 YPNAIASTLVHKFFLVFSKW 279
Score = 75 (31.5 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 36/157 (22%), Positives = 63/157 (40%)
Query: 353 LFEPFTFFEAYKNYL---RIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCH 408
+F + F Y N + + +++ + R W G VES++R L +E++ + L H
Sbjct: 275 VFSKWYVFRLYYNKIDCRHVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AH 333
Query: 409 PHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK 463
+P F + K P + +GL K+ E D+ ++ F V +
Sbjct: 334 VNPQSFPAPKESPDREEFRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS 392
Query: 464 P----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 496
M+I+ HV R+ L + P V R T
Sbjct: 393 KMFELDMKIAAMHVKRKQLHQLL-PSHVLQKRKKHST 428
>TAIR|locus:2084274 [details] [associations]
symbol:PAPS3 "poly(A) polymerase 3" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=RCA] InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 EMBL:AK221644 IPI:IPI00518099 RefSeq:NP_187308.3
UniGene:At.40500 ProteinModelPortal:Q56XM9 SMR:Q56XM9 IntAct:Q56XM9
STRING:Q56XM9 EnsemblPlants:AT3G06560.1 GeneID:819835
KEGG:ath:AT3G06560 TAIR:At3g06560 HOGENOM:HOG000006246
InParanoid:Q56XM9 OMA:IDETSWK PhylomeDB:Q56XM9
ProtClustDB:CLSN2699159 Genevestigator:Q56XM9 Uniprot:Q56XM9
Length = 507
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 155/412 (37%), Positives = 230/412 (55%)
Query: 20 PTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLL 79
P DD+ + L + + + L S E+ V R V+ +L +IV WVK ++ L +
Sbjct: 12 PQDDE--SSISLRQLMVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQI 69
Query: 80 QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPV 139
NA I +GSY LGV+G +DID LC+GP A+ EDFF L ML EV+ELH V
Sbjct: 70 DATNATILPYGSYGLGVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCV 129
Query: 140 PDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 199
DA VP+++FKF G+ +DL YA+L + IP ++D+ L++ DE + + L+G R
Sbjct: 130 KDAKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKC 189
Query: 200 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLV 259
IL+LVP ++ F++ LRC++ WAKRRGVY N+ GFLGG++ A+L A +C PNA S L+
Sbjct: 190 ILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLL 249
Query: 260 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 319
+ FF + W+WP PV+L S G P LMPI P + +
Sbjct: 250 ANFFYTFAHWQWPTPVVLLEDTYPSTGA--------PPG---LMPIQLPCGSHQYCNSTI 298
Query: 320 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDL 379
+ ST ++ EF GH + + K + W LFE + + Y + +I +SA N +DL
Sbjct: 299 TRSTFYKIVAEFLLGHNLTKDYLK--LNFSWKDLFELYPYANTYTWFTKIHLSAANQEDL 356
Query: 380 RNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQ 430
+W GWV+SR R L +KIE Y + C P+P ++ + +K ++ GLQ
Sbjct: 357 SDWVGWVKSRFRCLLIKIEE-VYGI--CDPNPTEYVETYTKQPNIVFYWGLQ 405
>UNIPROTKB|F8WAT4 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
EMBL:AC012498 IPI:IPI00893537 ProteinModelPortal:F8WAT4 SMR:F8WAT4
Ensembl:ENST00000414060 ArrayExpress:F8WAT4 Bgee:F8WAT4
Uniprot:F8WAT4
Length = 234
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 121/235 (51%), Positives = 163/235 (69%)
Query: 35 LRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRL 94
++ ++E +EE R VLG+L+ +VK W+ +S +K L ++ KIFTFGSYRL
Sbjct: 1 MKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRL 60
Query: 95 GVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGV 154
GVH GADID LCV PRH R DFF + L + L V DA VPV+KF+F G+
Sbjct: 61 GVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGI 119
Query: 155 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 214
IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP + FR TL
Sbjct: 120 EIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTL 179
Query: 215 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 269
R ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V+++W
Sbjct: 180 RAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKW 234
>UNIPROTKB|H0YJ00 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
Ensembl:ENST00000553461 Uniprot:H0YJ00
Length = 203
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 110/188 (58%), Positives = 137/188 (72%)
Query: 106 LCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSL 165
LCV PRH R DFF + L EV +L V +A VPV+K F G+ ID+L+ARL+L
Sbjct: 3 LCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLAL 61
Query: 166 WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRG 225
IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR
Sbjct: 62 QTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHN 121
Query: 226 VYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSL 285
+YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L
Sbjct: 122 IYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNL 181
Query: 286 GLQVWDPR 293
L VWDPR
Sbjct: 182 NLPVWDPR 189
>UNIPROTKB|G3V2A0 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
Pfam:PF04926 Pfam:PF04928 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 EMBL:AL163051 Gene3D:3.30.70.590
SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3V2A0 SMR:G3V2A0 Ensembl:ENST00000555626
ArrayExpress:G3V2A0 Bgee:G3V2A0 Uniprot:G3V2A0
Length = 475
Score = 453 (164.5 bits), Expect = 1.7e-42, P = 1.7e-42
Identities = 104/255 (40%), Positives = 145/255 (56%)
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A+ W LFE FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFF 118
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSK 419
+ YK+Y+ + SA W G VES++R L +E++ + L H +P F + K
Sbjct: 119 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKEN 177
Query: 420 P----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVA 471
P + +GL K+ E D+ ++ F V + M+I+
Sbjct: 178 PDKEEFRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 236
Query: 472 HVTRRNL----PNFV 482
HV R+ L PN V
Sbjct: 237 HVKRKQLHQLLPNHV 251
>UNIPROTKB|H7C3W0 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
EMBL:AC012498 ProteinModelPortal:H7C3W0 Ensembl:ENST00000453839
Bgee:H7C3W0 Uniprot:H7C3W0
Length = 168
Score = 333 (122.3 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 69/151 (45%), Positives = 92/151 (60%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+ +S
Sbjct: 14 GITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVS 73
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 74 ESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKH 132
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSI-DLL 159
+ L V DA VPV+KF+F G+ + +LL
Sbjct: 133 QDGIRNLRAVEDAFVPVIKFEFDGIEVVELL 163
>UNIPROTKB|G3V3I9 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 EMBL:AL163051 HGNC:HGNC:14981
ChiTaRS:PAPOLA ProteinModelPortal:G3V3I9 SMR:G3V3I9
Ensembl:ENST00000556619 ArrayExpress:G3V3I9 Bgee:G3V3I9
Uniprot:G3V3I9
Length = 177
Score = 310 (114.2 bits), Expect = 8.5e-27, P = 8.5e-27
Identities = 68/158 (43%), Positives = 93/158 (58%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEA--------------VSREEVLG 55
GIT PISLA P + D + T+KL + L+ ++E +EE ++R +LG
Sbjct: 21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRSNDLEYLIDNCFINRILILG 80
Query: 56 RLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR 115
+L+ +VK W+++IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R
Sbjct: 81 KLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR 140
Query: 116 EEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSG 153
DFF + L EV +L V +A VPV+K F G
Sbjct: 141 S-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDG 177
>UNIPROTKB|F1NDP2 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351
GO:GO:0004652 GeneTree:ENSGT00390000017928 EMBL:AADN02003685
IPI:IPI00582545 Ensembl:ENSGALT00000018088 ArrayExpress:F1NDP2
Uniprot:F1NDP2
Length = 109
Score = 218 (81.8 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 42/88 (47%), Positives = 60/88 (68%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D M T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 20 GITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREIS 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVH 97
+K L +++ KIFTFGSYRLGVH
Sbjct: 80 ESKNLPQSVIENVGGKIFTFGSYRLGVH 107
>UNIPROTKB|G3V457 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3V457 SMR:G3V457 Ensembl:ENST00000553689
ArrayExpress:G3V457 Bgee:G3V457 Uniprot:G3V457
Length = 111
Score = 216 (81.1 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 41/88 (46%), Positives = 60/88 (68%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVH 97
+K L +++ KIFTFGSYRLGVH
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVH 108
>UNIPROTKB|G4N5I8 [details] [associations]
symbol:MGG_06121 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR009097 InterPro:IPR011068 Pfam:PF04926 Pfam:PF04928
Pfam:PF03372 GO:GO:0005634 EMBL:CM001233 GO:GO:0006351
GO:GO:0003723 SUPFAM:SSF55144 InterPro:IPR005135 SUPFAM:SSF56219
GO:GO:0004652 GO:GO:0043631 SUPFAM:SSF55003 RefSeq:XP_003711988.1
ProteinModelPortal:G4N5I8 EnsemblFungi:MGG_06121T0 GeneID:2684277
KEGG:mgr:MGG_06121 InterPro:IPR007547 Pfam:PF04457 Uniprot:G4N5I8
Length = 1238
Score = 234 (87.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 98/419 (23%), Positives = 178/419 (42%)
Query: 14 PISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK-IWVKKISRAK 72
P+ LA + + + L+ L + + EE R+ L +V V+ +S A
Sbjct: 595 PVDLAR-APESMRDPQVLKGMLESMGAIPAAEENPRRQAAFDALRHVVTGNLVEGVSDAS 653
Query: 73 GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP- 131
D+L ++ + GS+ LGV +DID LC+GP ++ FF Q + +
Sbjct: 654 EY-DRL--RSSIIMVPVGSWGLGVSTLSSDIDCLCIGPLSSST---FFALTTQRIKKASV 707
Query: 132 ----EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSL----WVIPEDLDISQDSILQNA 183
E+ L V +++ + V +DL Y + W P L + + +
Sbjct: 708 ESGLEIKLLRRVRANSGVMLELEVMSVRVDLQYCAATAVAEQW--PAVLKLPPNDPIFAL 765
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
QT+ L R D + +P + FR R ++ WA+ RG+YS G+LGGI ++L+
Sbjct: 766 PAQTLGKLKALRDLDYLRETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILL 825
Query: 244 ARICQLYPN------AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
AR+C+L +VP +L S FF Y + W N + L R+ +
Sbjct: 826 ARVCKLLARDYGQEVSVPDIL-SSFFSHYASFDWRNKIAFDPFFHKKLNYL-----RSAR 879
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
+ ++ PA +N++ + +++ + E + +E+ NE + WDT F
Sbjct: 880 EPLAILGFFPPA---LNTTLAATVPSMKAIARELSQANELL-----NEDGMTWDTFFGAS 931
Query: 358 T---------------FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIER 399
+ F +YK++++I++ + + GW+ESR L + + R
Sbjct: 932 SAGGDKTHSLARGAADFLSSYKSFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSR 990
>UNIPROTKB|Q59G05 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma variant"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR011068 Pfam:PF04926 GO:GO:0005634 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
RefSeq:NP_075045.2 UniGene:Hs.387471 GeneID:64895 KEGG:hsa:64895
CTD:64895 HGNC:HGNC:14982 GenomeRNAi:64895 NextBio:67037
EMBL:AC011245 EMBL:AC012498 EMBL:AB209304 IPI:IPI00555821
ProteinModelPortal:Q59G05 SMR:Q59G05 STRING:Q59G05 PRIDE:Q59G05
Ensembl:ENST00000412217 ArrayExpress:Q59G05 Bgee:Q59G05
Uniprot:Q59G05
Length = 382
Score = 177 (67.4 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 46/185 (24%), Positives = 92/185 (49%)
Query: 326 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 385
+M++EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60
Query: 386 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 441
VES++R L +ER+ + + +P PG+ Y S +F+G+ ++ V E
Sbjct: 61 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESV 119
Query: 442 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW 497
D+ ++ F V + + K GM+I HV ++ L +++ P + + +
Sbjct: 120 NIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLS 178
Query: 498 DSRRA 502
D R+
Sbjct: 179 DVNRS 183
Score = 60 (26.2 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 21/83 (25%), Positives = 35/83 (42%)
Query: 571 DANELAG---SNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNS 627
D N +G S R ++++ DS R + N +S K D P +G+ NS
Sbjct: 179 DVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETER--------NS 230
Query: 628 KDAEKLAIEKIMSGPYVADQAFP 650
+ + +EK +S P + P
Sbjct: 231 AEPAAVIVEKPLSVPPAQGLSIP 253
>UNIPROTKB|F1PYB9 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR007010 InterPro:IPR011068
Pfam:PF04926 GO:GO:0005634 GO:GO:0006378 GO:GO:0003723
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:AAEX03007549
Ensembl:ENSCAFT00000004771 Uniprot:F1PYB9
Length = 384
Score = 176 (67.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 46/185 (24%), Positives = 92/185 (49%)
Query: 326 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 385
+M++EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60
Query: 386 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 441
VES++R L +ER+ + + +P PG+ Y S +F+G+ ++ V E
Sbjct: 61 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESV 119
Query: 442 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW 497
D+ ++ F V + + K GM+I HV ++ L +++ P + + +
Sbjct: 120 NIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLS 178
Query: 498 DSRRA 502
D R+
Sbjct: 179 DVSRS 183
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 732 692 0.00081 121 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 629 (67 KB)
Total size of DFA: 383 KB (2188 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.65u 0.13s 58.78t Elapsed: 00:00:04
Total cpu time: 58.66u 0.13s 58.79t Elapsed: 00:00:04
Start: Tue May 21 14:48:25 2013 End: Tue May 21 14:48:29 2013