BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004767
(732 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359490984|ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 757
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/714 (73%), Positives = 601/714 (84%), Gaps = 8/714 (1%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
+++GQRLGITEPISL GP + D+ +T++LEK+L LYESQEEAVSREEVLGRLDQIVK
Sbjct: 10 NNSGQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVK 69
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
IWVK ISRAKGLN+QL+QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE
Sbjct: 70 IWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 129
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 182
LH+ML+EMPEVTELHPVPDAHVPVM+FKFSGVSIDLLYA+LSLWVIPEDLD+SQDSILQN
Sbjct: 130 LHKMLSEMPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQN 189
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
ADEQTVRSLNGCRVTDQILRLVP IQNFRTTLR MRFWAKRRGVYSNVAGFLGGINWALL
Sbjct: 190 ADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALL 249
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VARICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEEG+LGLQVWDPR+ PKD++HL
Sbjct: 250 VARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHL 309
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MPIITPAYPCMNSSYNVS+STLRIM +EF+RG+EI E ME N+A DW TL EP+ FFEA
Sbjct: 310 MPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKA--DWATLCEPYPFFEA 367
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 422
YKNYL+I+I+AENADDLR WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS+P +
Sbjct: 368 YKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFH 427
Query: 423 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 482
C YFMGLQRKQGVP EGEQFDIRLTV EFK +V MYTL KPGM+I V HV RRN+PNFV
Sbjct: 428 CCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFV 487
Query: 483 FPGGVRPSRPSKGTWDSRRALERKVSSHTK-PGADDGRKRKQTDDNVDTHLRNAKCHATM 541
FPGGVRPSRP+K + RR LE VS+ GA+D +KRK+ D+NV+T+ RNAKC
Sbjct: 488 FPGGVRPSRPTKVASERRRVLEPNVSTQAVLEGAEDSKKRKREDENVETNSRNAKCLVAA 547
Query: 542 PSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVS 601
SSS E +P++ST+++ SI + + MD N L + +EKVENN+ ++ NSVEV
Sbjct: 548 ASSSHEVLSSNPLVSTVNACSI--KVDSMDINMLGKTRKEKVENNIEHGLKNLNNSVEVP 605
Query: 602 SHNGKVDGPMIGDPRNKGLSFNSSNSK--DAEKLAIEKIMSGPYVADQAFPLELDQLEDD 659
NG+VDG + K LS + + +AEK+AIEKIMSGPYV+ QAFP ELD+LEDD
Sbjct: 606 PQNGEVDGSVRCSHPIKTLSSSGGSPSSTEAEKIAIEKIMSGPYVSHQAFPGELDELEDD 665
Query: 660 LELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELE 713
+E KNQ KDF GST+ +S S N+A E LT+ +G + LSPNGGL ELE
Sbjct: 666 VEYKNQVKDFTGSTKGSSAESSKANVAEEP-LTTTSGTVPCTILSPNGGLEELE 718
>gi|255567792|ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha, putative [Ricinus communis]
Length = 770
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/729 (71%), Positives = 590/729 (80%), Gaps = 35/729 (4%)
Query: 4 SNGQ---RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
+NGQ RLGIT+PISL GPT+ DL+++R+LEK+L+D+ LYES+EE+VSREEVLGRLDQI
Sbjct: 10 NNGQQQLRLGITDPISLGGPTEYDLIKSRELEKFLQDMGLYESREESVSREEVLGRLDQI 69
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK WVK ISRAKGLN+QL+QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF
Sbjct: 70 VKHWVKVISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 129
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
GELH+ML+EMPEVTELHPVPDAHVPV+KFKF GVSIDLLYA+LSLWVIPEDLDISQDSIL
Sbjct: 130 GELHRMLSEMPEVTELHPVPDAHVPVLKFKFKGVSIDLLYAKLSLWVIPEDLDISQDSIL 189
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
QNADEQTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWA
Sbjct: 190 QNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWA 249
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
LLVARICQL+PNA+P+MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGLQVWDPRRNPKD+Y
Sbjct: 250 LLVARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRY 309
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP MNSSYNVS STLRIM +EFQRG+EICEAME ++A DW+TLFE F+FF
Sbjct: 310 HLMPIITPAYPSMNSSYNVSASTLRIMSEEFQRGNEICEAMEASKA--DWNTLFESFSFF 367
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 420
+AYKNYL+IDI AEN DDLR WKGWVESRLRQLTLKIERHT+NMLQCHPHPG+F+DKS+P
Sbjct: 368 DAYKNYLQIDIGAENEDDLRKWKGWVESRLRQLTLKIERHTFNMLQCHPHPGEFTDKSRP 427
Query: 421 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 480
L+CSYFMGLQRKQGVP EGEQFDIR+TV+EFK +V+MYT KPGM+I V HV RRN+P+
Sbjct: 428 LHCSYFMGLQRKQGVPANEGEQFDIRITVEEFKISVNMYTSWKPGMEIHVTHVKRRNIPS 487
Query: 481 FVFPGGVRPSRPSKGTWDSRRALERKV--SSHTKPGADDGRKRKQTDDNVDTHLRNAKCH 538
FVFPGG+RPSRPSK TWDS+R+ K G+DD KRK+ DDNV + AK
Sbjct: 488 FVFPGGIRPSRPSKTTWDSKRSSAEKSGEGKGVSDGSDDKGKRKRIDDNVANATKIAKPD 547
Query: 539 ATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSV 598
+T P SGE GSP T+S N + E VENNLTD S++
Sbjct: 548 STSP-LSGEVNNGSPSAGTVS-------LLLTSTNAVGEPRDEPVENNLTDDFSNSKDLT 599
Query: 599 EVSSHNGKVDGPMIGDPRNKG-LSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLE 657
+HNG+++ P NK L N + SK AEKLAIE IMSGPYV +QA P ELD+LE
Sbjct: 600 GFYAHNGELNPP------NKVLLGINEAPSKVAEKLAIETIMSGPYVTNQALPQELDELE 653
Query: 658 DDLELKNQAKDF-AGS----TQNNSLGSCAVNIAAE--------ATLTSMNGGSSSSALS 704
DD E + Q KDF AG+ T ++ + S + + A+ A + S NG S+AL
Sbjct: 654 DDFECRTQVKDFGAGANTKDTNDSPIESSSASTTAKTLPNAPVAAPVISSNGTDPSTALC 713
Query: 705 PNGGLGELE 713
PNGGL ELE
Sbjct: 714 PNGGLEELE 722
>gi|449439435|ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 748
Score = 1004 bits (2596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/727 (68%), Positives = 574/727 (78%), Gaps = 37/727 (5%)
Query: 2 GSSNGQ-RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
G +NGQ RLGIT+PISL+GPT+ D+++TR+LEKYL+D LYESQE+AV+REEVLGRLDQI
Sbjct: 8 GRNNGQQRLGITDPISLSGPTEYDVLKTRELEKYLQDAGLYESQEDAVNREEVLGRLDQI 67
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VKIWVK ISRAKGLN+QL+QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF
Sbjct: 68 VKIWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 127
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
GELH+ML+EMPEV+ELHPVPDAHVPVM+FK SGVSIDLLYA+LSLWVIPEDLDISQDSIL
Sbjct: 128 GELHKMLSEMPEVSELHPVPDAHVPVMRFKLSGVSIDLLYAKLSLWVIPEDLDISQDSIL 187
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
QN DEQTVRSLNGCRVTD+ILRLVP IQ+FRTTLRCMRFWAKRRGVYSNV+GFLGGINWA
Sbjct: 188 QNTDEQTVRSLNGCRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVSGFLGGINWA 247
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
LLVARICQLYPNA+P+MLVSRFFRV+TQWRWPNPV+LCA EEGSLGLQVWDPRRNPKD+Y
Sbjct: 248 LLVARICQLYPNALPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPRRNPKDRY 307
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYPCMNSSYNVS STLRIM +EF+RGH+ICE ME+N++ DWDTLFEP+ FF
Sbjct: 308 HLMPIITPAYPCMNSSYNVSASTLRIMTEEFRRGHDICEVMEENKS--DWDTLFEPYPFF 365
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 420
EAYKNYL+IDI+AEN DD+R WKGWVESRLRQLTLKIERHTYNMLQCHP+PGDFSDKS+P
Sbjct: 366 EAYKNYLQIDITAENDDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFSDKSRP 425
Query: 421 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 480
+ YFMGLQRKQG P GEQFDIRLTV EFK +V++YT RK GM+I V+HV RR++PN
Sbjct: 426 FHHCYFMGLQRKQGGPASGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYVSHVKRRSIPN 485
Query: 481 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGA----------DDGRKRKQTDDNVDT 530
FVFPGGVRPSR SK TWD RR+ E K S T+ + DD RKR + DDN +T
Sbjct: 486 FVFPGGVRPSRASKLTWDIRRSSELKASDSTQVDSPSEATESLDGDDRRKRIRIDDNANT 545
Query: 531 HLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDS 590
+LRN +C A S E E S + +T S S ++ F AN L NL D
Sbjct: 546 NLRNGECLAMAHSHPEEVHEVSQVSNTSSCSIKDVNFIPTSANNL---------ENLAD- 595
Query: 591 IRGSRNSVEVSSHNGKVDGPMIGDPRNKGLS---FNSSNSKDAEKLAIEKIMSGPYVADQ 647
VSS N G + P +S ++SN K+AEKLAI+KI+S Y + Q
Sbjct: 596 ---------VSSQNNGDHGSLRVSPSTNNVSDAAADTSNCKEAEKLAIQKILSDSYDSHQ 646
Query: 648 AFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLT-SMNGGSSSSALSPN 706
FP E ++LE D + NQAKDF + Q + + S N + T S N SS+ N
Sbjct: 647 DFPCETEELE-DFDYNNQAKDFGATKQGSPMMSSVANTSPLVLPTVSCNEARQSSSSYYN 705
Query: 707 GGLGELE 713
GGL ELE
Sbjct: 706 GGLEELE 712
>gi|356531174|ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/728 (67%), Positives = 578/728 (79%), Gaps = 25/728 (3%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
QRLGITEPISLAGPT+DD+++TR+LEKYL+ V LYESQEEAV REEVLGRLDQIVKIWVK
Sbjct: 14 QRLGITEPISLAGPTEDDVIKTRELEKYLQGVGLYESQEEAVGREEVLGRLDQIVKIWVK 73
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
ISRAKG N+QL+ EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA+R+EDFFGEL +M
Sbjct: 74 NISRAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGELQKM 133
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L+EM EVTELHPVPDAHVPVMKFKF+GVS+DLLYARL+LWVIP+DLDISQ+SILQN DEQ
Sbjct: 134 LSEMQEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPDDLDISQESILQNVDEQ 193
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TV SLNGCRVTDQ+LRLVP IQ FRTTLRCMRFWAKRRGVYSNVAGFLGGIN ALLVARI
Sbjct: 194 TVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARI 253
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+P+MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGL VWDPRRNPKD+YHLMPII
Sbjct: 254 CQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPII 313
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYPCMNS+YNV++STLR+M DEF+RG EICEAME ++A DWDTLFEP+ FFE+YKNY
Sbjct: 314 TPAYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKA--DWDTLFEPYPFFESYKNY 371
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF 426
L+IDI+AENADDLR WKGWVESRLRQLTLKIERHTY MLQCHPHPG+FSD S+P + YF
Sbjct: 372 LQIDITAENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFHHCYF 431
Query: 427 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGG 486
MGLQRKQGVPV EGEQFDIRLTV+EFK +V+ YTL KPGM I V+HV RRN+PN++FPGG
Sbjct: 432 MGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMNIHVSHVKRRNIPNYIFPGG 491
Query: 487 VRPSRPSKGTWDSRRALERKVSSH---TKP--------GADDGRKRKQTDDNVDTHLRNA 535
VRP+ PSK T +++++ + +V H KP GADD RKRK+++D +D + RN+
Sbjct: 492 VRPTFPSKVTAENKQSSKSRVPGHGQAEKPQGGKTVVVGADDVRKRKRSEDIMDNNPRNS 551
Query: 536 KCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSR 595
K ++ S E E I +SSS +++F+ + N + G EK N I
Sbjct: 552 KSPVSLAPPSREVNED--ISPISASSSCSMKFDESEVNSIGGQKSEKPCLNSPGEIPSGD 609
Query: 596 NSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQ 655
+ S N + P++ + ++SNSK+ EKLAIEKIMSGPY A QAFP E ++
Sbjct: 610 SGTNGSVTNNQQVNPVLA-------AADTSNSKEEEKLAIEKIMSGPYDAHQAFPEEPEE 662
Query: 656 LEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELEV- 714
LEDD + KNQ KD G+ +NN + AE + S S+ S N L ELE
Sbjct: 663 LEDDTQYKNQDKDSGGNMKNNMESLLSKPAVAEEPVISKEITCSTHLFS-NEILEELEPA 721
Query: 715 -LSANLIT 721
LSA L++
Sbjct: 722 ELSAPLLS 729
>gi|357521515|ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago truncatula]
Length = 822
Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/751 (64%), Positives = 572/751 (76%), Gaps = 52/751 (6%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
QRLGITEPISL+GPT+ D+ +TR+LEKYL+D LYE+Q+EA+ REEVLGRLDQIVKIWVK
Sbjct: 15 QRLGITEPISLSGPTEYDVAKTRELEKYLQDAGLYENQDEAICREEVLGRLDQIVKIWVK 74
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
I RAKG N+QL++EANA IFTFGSYRLGVHGPGADID LCVGPRHATR+EDFFGELH+M
Sbjct: 75 TICRAKGFNEQLVKEANAMIFTFGSYRLGVHGPGADIDVLCVGPRHATRKEDFFGELHKM 134
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L+EMPEVTELHPVPDAHVPVM FKF+GVS+DLLYA+LSLWVIPEDLD+SQ++ILQ DEQ
Sbjct: 135 LSEMPEVTELHPVPDAHVPVMGFKFNGVSLDLLYAQLSLWVIPEDLDLSQEAILQYTDEQ 194
Query: 187 TVRSLNGCRVTDQILRLVP-----------------------------KIQNFRTTLRCM 217
TVRSLNGCRVTDQIL LVP ++QNFRTTLRC+
Sbjct: 195 TVRSLNGCRVTDQILHLVPNIQVDKYRTFTFSFDMTSGFHVIDYISISQVQNFRTTLRCV 254
Query: 218 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL 277
+ WAK RGVYSNVAGFLGGINWALLV RICQLYPNA+P+MLVSRFFRVYTQWRWPNPV+L
Sbjct: 255 KLWAKCRGVYSNVAGFLGGINWALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVML 314
Query: 278 CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 337
C I+EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS STLR+M +EFQRG EI
Sbjct: 315 CTIKEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSLSTLRVMTEEFQRGDEI 374
Query: 338 CEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKI 397
CEAME N+A DWDTLFEP+ FFE+YKNYLRIDISAEN DDLRNWKGWV+SRLRQLTLKI
Sbjct: 375 CEAMEANKA--DWDTLFEPYPFFESYKNYLRIDISAENVDDLRNWKGWVKSRLRQLTLKI 432
Query: 398 ERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 457
ER+TY MLQCHPHPGDFSDKS+PL+CSYFMGLQRKQGVP EG QFD+RLTV+EFK +V+
Sbjct: 433 ERNTYGMLQCHPHPGDFSDKSRPLHCSYFMGLQRKQGVPANEGGQFDMRLTVEEFKHSVN 492
Query: 458 MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKP---- 513
YT KPGM IS++HV RRN+P FVFPGGVRP PSK TW S+R E +VS H +
Sbjct: 493 AYTQWKPGMNISISHVKRRNIPAFVFPGGVRPKCPSKVTWVSKRRSELRVSGHGQAEKSQ 552
Query: 514 -----GADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFE 568
GA++ RKRKQ +D+ D LRN++ +++P SS + E +S +S S+ + +
Sbjct: 553 VGKELGANNDRKRKQAEDSGD-DLRNSRSFSSLPPSSRDVHEDGNPVSIANSCSV--KCD 609
Query: 569 HMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSK 628
+ N ++ EK + N + G R + N ++ P++ + + SN +
Sbjct: 610 DTELNCMSEQKSEKPDLNFSGECPGDRETDGSVKSNSQII-PLLA-------ATDRSNFE 661
Query: 629 DAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAE 688
+AEK+ I+KI+ GP QAFP E D+LEDDLE +N+ KDF G+ N + S +AAE
Sbjct: 662 EAEKVVIQKIVCGPCEVHQAFPEEPDELEDDLEYRNKVKDFGGNLANINFDSTKSVVAAE 721
Query: 689 ATLTSMNGGSSSSALSPNGGLGELEVLSANL 719
S SSS+ + NGGL ELE L L
Sbjct: 722 PVF-SQKENSSSTHIYSNGGLEELECLWGAL 751
>gi|356522834|ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/732 (65%), Positives = 572/732 (78%), Gaps = 26/732 (3%)
Query: 4 SNGQ-RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
+NGQ RLGITEPISLAGPTDDD ++T +LEKYL+ V LYESQEEAV REEVLGRLDQIVK
Sbjct: 10 NNGQQRLGITEPISLAGPTDDDAIKTLELEKYLQGVGLYESQEEAVVREEVLGRLDQIVK 69
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
IWVK ISRAKG N+QL+ EANAKIFT GSYRLGVHGPGADIDTLCVGPRHA+R+EDFFG
Sbjct: 70 IWVKNISRAKGFNEQLVHEANAKIFTSGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGG 129
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 182
L +ML+EM EVTELHPVPDAHVPV+KFKF+GVS+DLLYARL+LWVIPEDLDISQ+SILQ+
Sbjct: 130 LQKMLSEMQEVTELHPVPDAHVPVVKFKFNGVSVDLLYARLALWVIPEDLDISQESILQS 189
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
DEQTV SLNGCRVTDQ+LRLVP IQ FRTTLRCMRFWAKRRGVYSNVAGFLGGIN ALL
Sbjct: 190 VDEQTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALL 249
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VARICQLYPNA+P MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGL VWDPRRNPKD+YHL
Sbjct: 250 VARICQLYPNALPDMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHL 309
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MPIITP YPCMNS+YNV++STLR+M DEF+RG EICEAME ++A DWDTLFEP+ FFE+
Sbjct: 310 MPIITPVYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKA--DWDTLFEPYPFFES 367
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 422
YKNYL+IDI+AENADDLR WKGWV SRLRQLTLKIERHTY MLQCHPHPG+FSD S+P +
Sbjct: 368 YKNYLQIDITAENADDLRQWKGWVGSRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFH 427
Query: 423 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 482
YFMGLQRKQGVPV EGEQFDIRLTV+EFK +V+ YTL KPGM I V+HV R N+PN++
Sbjct: 428 HCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMDIHVSHVKRSNIPNYI 487
Query: 483 FPGGVRPSRPSKGTWDSRRALERKVSSH---TKP--------GADDGRKRKQTDDNVDTH 531
FPGGVRP+ PSK T +++++ + + S H KP GADD RKRK+++DN+D +
Sbjct: 488 FPGGVRPTFPSKVTAENKQSSKSRASGHGQTEKPQGGKAVAVGADDVRKRKRSEDNMDNN 547
Query: 532 LRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSI 591
RN++ ++P S E E I +SSS +++F+ + N + G EK+ I
Sbjct: 548 PRNSRSPVSLPPPSREVHED--ISPISASSSCSMKFDESEVNSIGGQKSEKLCLKSPGEI 605
Query: 592 RGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPL 651
+ S + + P++ + ++SNSK+ EKLAIEKIMSG Y A QAF
Sbjct: 606 PSGDSGTNGSVTSNQQVNPVLA-------AADTSNSKEEEKLAIEKIMSGLYDAHQAFQE 658
Query: 652 ELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGE 711
E +LED+ + KNQ KD + + +NN + E + S + S+ L N L E
Sbjct: 659 EPKELEDNTQYKNQDKDSSANMKNNMESLDSKPAVPEEPVISKE-ITCSTHLCSNESLEE 717
Query: 712 LEV--LSANLIT 721
LE L+A L++
Sbjct: 718 LEPAELTAPLLS 729
>gi|357500153|ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago truncatula]
Length = 752
Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/738 (64%), Positives = 569/738 (77%), Gaps = 35/738 (4%)
Query: 4 SNG-QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
SNG Q LGITEPISLAGPT++D+ +T +LEKYL+ LYESQ+EAV REEVLGRLDQIVK
Sbjct: 10 SNGKQWLGITEPISLAGPTEEDVTKTHELEKYLQGAGLYESQQEAVGREEVLGRLDQIVK 69
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
IWVK ISRAKG N+QL+QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR+EDFFGE
Sbjct: 70 IWVKTISRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGE 129
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 182
L +ML+EM EVTELHPVPDAHVPVMKFKF+GVS+DLLYARL+LWVIPEDLDISQ+SILQN
Sbjct: 130 LQKMLSEMEEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQN 189
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
DEQTV SLNGCRVTDQ+LRLVP IQNFRTTLR MRFWAKRRGVYSNVAGFLGGIN ALL
Sbjct: 190 VDEQTVLSLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINLALL 249
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
V RICQLYPNA+P+MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGL VWDPRRNP+D+YHL
Sbjct: 250 VGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHL 309
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MPIITPAYPCMNS+YNV+TSTLRIM DEF+RG EICEAME ++A DWDTLFEP+ FFEA
Sbjct: 310 MPIITPAYPCMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKA--DWDTLFEPYPFFEA 367
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 422
YKNYL+IDI+AEN DDLR WKGWVESRLRQLTLKIE++TY MLQCHP+PG+FSDKS+ +
Sbjct: 368 YKNYLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSFH 427
Query: 423 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 482
YFMGLQRKQGVPV EGEQFDIR TV+EFK V+ YT KPGM I V+HV RRN+PNF+
Sbjct: 428 QCYFMGLQRKQGVPVSEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRVSHVKRRNIPNFI 487
Query: 483 FPGGVRPSRPSKGTWDSRRALERKVSSHTKP-----------GADDGRKRKQTDDNVDTH 531
FPGGVRPS PS+ ++RR+ + +V+ ++ GADD RKRK+ +DN ++
Sbjct: 488 FPGGVRPSVPSRVNGENRRSSKSRVAGQSQSEKSQGGKAVVLGADDERKRKRLEDNNNSR 547
Query: 532 LRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSI 591
+ + + P+ + + +P +T SS +++F+ + N + EK+ I
Sbjct: 548 VSKSSASVSPPNRNVP-EDRNPFSAT---SSCSMKFDDSEVNSMGDQKSEKLCLKSVGEI 603
Query: 592 -RGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFP 650
G + ++ N ++D P ++SN+K+ E+LAIE IM+GPY A QA
Sbjct: 604 PAGDSVTNGSATDNKQLDAP------------DTSNTKEEERLAIEHIMAGPYEAHQALT 651
Query: 651 LELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVN-IAAEATLTSMNGGSSSSALSPNGGL 709
E D+LE D+ +NQ D GS ++N+ S N + E + S S+ + NGGL
Sbjct: 652 EEPDELEQDMGYRNQVNDNGGSVKSNNFDSSNPNPVVVEDQVISKETVCSTHSFC-NGGL 710
Query: 710 GELEV--LSANLITSIGA 725
ELE L+A L I A
Sbjct: 711 EELEPAELTAPLFCGIPA 728
>gi|147795652|emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
Length = 1097
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/621 (73%), Positives = 518/621 (83%), Gaps = 8/621 (1%)
Query: 96 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 155
VHGPGADIDTLCVGPRHATREEDFFGELH+ML+EMPEVTELHPVPDAHVPVM+FKFSGVS
Sbjct: 283 VHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEVTELHPVPDAHVPVMRFKFSGVS 342
Query: 156 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 215
IDLLYA+LSLWVIPEDLD+SQDSILQNADEQTVRSLNGCRVTDQILRLVP IQNFRTTLR
Sbjct: 343 IDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLR 402
Query: 216 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 275
MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA+PSMLVSRFFRVYTQWRWPNPV
Sbjct: 403 FMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPV 462
Query: 276 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 335
+LCAIEEG+LGLQVWDPR+ PKD++HLMPIITPAYPCMNSSYNVS+STLRIM +EF+RG+
Sbjct: 463 MLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGN 522
Query: 336 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 395
EI E ME N+A DW TL EP+ FFEAYKNYL+I+I+AENADDLR WKGWVESRLRQLTL
Sbjct: 523 EISEVMEANKA--DWXTLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTL 580
Query: 396 KIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQA 455
KIERHTYNMLQCHPHPGDFSDKS+P +C YFMGLQRKQGVP EGEQFDIRLTV EFK +
Sbjct: 581 KIERHTYNMLQCHPHPGDFSDKSRPFHCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHS 640
Query: 456 VSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTK-PG 514
V MYTL KPGM+I V HV RRN+PNFVFPGGVRPSRP+K + RR LE VS+ G
Sbjct: 641 VGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRPTKVASERRRVLEPNVSTQAVLEG 700
Query: 515 ADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANE 574
A+D +KRK+ D+NV+T+ RNAKC SSS E +P++ST+++ SI + + MD N
Sbjct: 701 AEDSKKRKREDENVETNSRNAKCLVAAASSSHEVLSSNPLVSTVNACSIKV--DSMDINM 758
Query: 575 LAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGL--SFNSSNSKDAEK 632
L + +EKVENN+ ++ NSVEV NG+VDG + K L S S +S +AEK
Sbjct: 759 LGKTRKEKVENNIEHGLKNLNNSVEVPPQNGEVDGSVRCSHPIKTLSSSGGSPSSTEAEK 818
Query: 633 LAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLT 692
+AIEKIMSGPYV+ QAFP ELD+LEDD+E KNQ KDF GST+ +S S N+A E LT
Sbjct: 819 IAIEKIMSGPYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSKANVAEEP-LT 877
Query: 693 SMNGGSSSSALSPNGGLGELE 713
+ +G + LSPNGGL ELE
Sbjct: 878 TTSGTVPCTILSPNGGLEELE 898
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 83/93 (89%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
+++ QRLGITEPISL GP + D+ +T++LEK+L LYESQEEAVSREEVLGRLDQIVK
Sbjct: 10 NNSSQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVK 69
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLG 95
IWVK ISRAKGLN+QL+QEANAKIFTFGSYRLG
Sbjct: 70 IWVKAISRAKGLNEQLVQEANAKIFTFGSYRLG 102
>gi|224135441|ref|XP_002322074.1| predicted protein [Populus trichocarpa]
gi|222869070|gb|EEF06201.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/508 (85%), Positives = 474/508 (93%), Gaps = 5/508 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
QRLGITEPISL GPT+ D+ +TR+LEK+L+D LYESQEEAVSREEVLGRLDQIVK WVK
Sbjct: 5 QRLGITEPISLGGPTEYDVTKTRELEKFLQDAGLYESQEEAVSREEVLGRLDQIVKNWVK 64
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
ISRAK LN+QL+QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH+M
Sbjct: 65 VISRAKRLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRM 124
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L+EMPEVTELHPVPDAHVPVM+FKF GVSIDLLYA+LSLWVIPEDLD+SQDS+L NADEQ
Sbjct: 125 LSEMPEVTELHPVPDAHVPVMRFKFKGVSIDLLYAKLSLWVIPEDLDVSQDSMLHNADEQ 184
Query: 187 TVRSLNGCRVTDQILRLVPKI---QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
TVRSLNGCRVTDQILRLVP I QNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLV
Sbjct: 185 TVRSLNGCRVTDQILRLVPNIQAMQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLV 244
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQL+PNA+P+MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGL VWDPRRNPKD+YHLM
Sbjct: 245 ARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLM 304
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PIITPAYP MNSSYNVS+STLRIM +EFQRG+EICEAME ++A +WDTLFEPF+FFEAY
Sbjct: 305 PIITPAYPSMNSSYNVSSSTLRIMTEEFQRGNEICEAMEVSKA--EWDTLFEPFSFFEAY 362
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 423
KNYL+IDISAEN DDLR WKGWVESRLRQLTLKIERHTYNMLQCHPHPG+FSDKS+PL+C
Sbjct: 363 KNYLQIDISAENEDDLRQWKGWVESRLRQLTLKIERHTYNMLQCHPHPGEFSDKSRPLHC 422
Query: 424 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 483
SYFMGLQRKQGVPV EGEQFDIR+TV EFK +V+MYTL KPGM+I V HV +RN+PNFVF
Sbjct: 423 SYFMGLQRKQGVPVNEGEQFDIRITVDEFKNSVNMYTLWKPGMEIRVTHVKKRNIPNFVF 482
Query: 484 PGGVRPSRPSKGTWDSRRALERKVSSHT 511
P GVRPSRPSK TWD RR+ E KV++++
Sbjct: 483 PSGVRPSRPSKATWDGRRSSEAKVANNS 510
>gi|297850192|ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338819|gb|EFH69236.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 716
Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/732 (64%), Positives = 539/732 (73%), Gaps = 76/732 (10%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
NGQR GITEPISL GPT+ D+++TR+LEK+L+DV LYES+EEAV REEVLG LDQIVK W
Sbjct: 7 NGQRFGITEPISLGGPTELDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTW 66
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
+K ISR KGLND+LL ANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRE DFFGEL
Sbjct: 67 IKTISRTKGLNDELLHLANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQ 126
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
+ML+EMPEVTELHPVPDAHVP+M FK +GVSIDLLYA+L LWVIPEDLDISQDSILQNAD
Sbjct: 127 RMLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDISQDSILQNAD 186
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
EQTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVA
Sbjct: 187 EQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVA 246
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNA+P+ML SRFFRVY QWRWPNPVLLC+++EGS GLQVWDPRRNPKD+ H+MP
Sbjct: 247 RICQLYPNALPNMLASRFFRVYNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPKDRLHIMP 306
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITPAYPCMNSSYNVS STLRIM EFQRG EICEAME N+A DWDTLFEPF FFEAYK
Sbjct: 307 IITPAYPCMNSSYNVSASTLRIMTGEFQRGKEICEAMEANKA--DWDTLFEPFAFFEAYK 364
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 424
NYL+IDISA N +DLR WKGWVESRLRQLTLKIERHTY+MLQCHPHP DF D S+PL+CS
Sbjct: 365 NYLQIDISAANVNDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDASRPLHCS 424
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 484
YFMGLQRKQGVP EGEQFDIR TV+EFK V+ YTL PGM+ISV+H+ RR+LPN+VFP
Sbjct: 425 YFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVSHIKRRSLPNYVFP 484
Query: 485 GGVRPSRPSKGTWDSRRALERK----------------VSSHTKPGAD---DGRKRKQTD 525
GGVRPS SKGTWDS R E + +SS +K G++ DG+KRK D
Sbjct: 485 GGVRPSHTSKGTWDSNRRSEHRNSSTSSALAAATTTTEMSSESKAGSNSPVDGKKRKWGD 544
Query: 526 DNVDT-HLRNAKCHA-TMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKV 583
+ T LR +K A ++P + E +P + +I SS +
Sbjct: 545 NETLTDQLRKSKHIAVSVPVENCEGGSPNPSVGSICSSPM-------------------- 584
Query: 584 ENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPY 643
+ NGK + P+ DP ++F + + AE L IEKI +
Sbjct: 585 ---------------KDYCTNGKSE-PISKDPPENVVAF---SKEPAESLPIEKIAT--- 622
Query: 644 VADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSAL 703
QA E ++LE+ + NQ + + + A AT+ S+ SA
Sbjct: 623 --PQAPSQETEELEESFDFGNQVVE--------QISHKVAILTATATIPPFEATSNGSAF 672
Query: 704 SPNGGLGELEVL 715
PN + ELEVL
Sbjct: 673 -PNEAVEELEVL 683
>gi|297734259|emb|CBI15506.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/484 (85%), Positives = 451/484 (93%), Gaps = 2/484 (0%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
+++GQRLGITEPISL GP + D+ +T++LEK+L LYESQEEAVSREEVLGRLDQIVK
Sbjct: 10 NNSGQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVK 69
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
IWVK ISRAKGLN+QL+QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE
Sbjct: 70 IWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 129
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 182
LH+ML+EMPEVTELHPVPDAHVPVM+FKFSGVSIDLLYA+LSLWVIPEDLD+SQDSILQN
Sbjct: 130 LHKMLSEMPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQN 189
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
ADEQTVRSLNGCRVTDQILRLVP IQNFRTTLR MRFWAKRRGVYSNVAGFLGGINWALL
Sbjct: 190 ADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALL 249
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VARICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEEG+LGLQVWDPR+ PKD++HL
Sbjct: 250 VARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHL 309
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MPIITPAYPCMNSSYNVS+STLRIM +EF+RG+EI E ME N+A DW TL EP+ FFEA
Sbjct: 310 MPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKA--DWATLCEPYPFFEA 367
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 422
YKNYL+I+I+AENADDLR WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS+P +
Sbjct: 368 YKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFH 427
Query: 423 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 482
C YFMGLQRKQGVP EGEQFDIRLTV EFK +V MYTL KPGM+I V HV RRN+PNFV
Sbjct: 428 CCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFV 487
Query: 483 FPGG 486
FPGG
Sbjct: 488 FPGG 491
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 629 DAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAE 688
+AEK+AIEKIMSGPYV+ QAFP ELD+LEDD+E KNQ KDF GST+ +S S N+A E
Sbjct: 529 EAEKIAIEKIMSGPYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSKANVAEE 588
Query: 689 ATLTSMNGGSSSSALSPNGGLGELE 713
LT+ +G + LSPNGGL ELE
Sbjct: 589 P-LTTTSGTVPCTILSPNGGLEELE 612
>gi|42562141|ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis
thaliana gb|AF255297 and contains a
Nucleotidyltransferase PF|01909 domain. ESTs
gb|AV536592, gb|AV553256, gb|AV561630, gb|AV532289 come
from this gene [Arabidopsis thaliana]
gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis thaliana]
gi|32527642|gb|AAP86214.1| poly(A) polymerase [Arabidopsis thaliana]
gi|110743114|dbj|BAE99449.1| hypothetical protein [Arabidopsis thaliana]
gi|332191538|gb|AEE29659.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 713
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/733 (63%), Positives = 533/733 (72%), Gaps = 81/733 (11%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
NGQR G++EPIS+ GPT+ D+++TR+LEK+L+DV LYES+EEAV REEVLG LDQIVK W
Sbjct: 7 NGQRFGVSEPISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTW 66
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
+K ISRAKGLNDQLL EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRE DFFGEL
Sbjct: 67 IKTISRAKGLNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQ 126
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
+ML+EMPEVTELHPVPDAHVP+M FK +GVSIDLLYA+L LWVIPEDLD+SQDSILQNAD
Sbjct: 127 RMLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNAD 186
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
EQTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVA
Sbjct: 187 EQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVA 246
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNA+P++LVSRFFRV+ QW WPN + LC+ +EGSLGLQVWDPR NPKD+ H+MP
Sbjct: 247 RICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMP 306
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITPAYPCMNSSYNVS STLRIM EFQRG+EICEAME N+A DWDTLFEPF FFEAYK
Sbjct: 307 IITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKA--DWDTLFEPFAFFEAYK 364
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 424
NYL+IDISA N DDLR WKGWVESRLRQLTLKIERH + ML CHPHP DF D S+PL+CS
Sbjct: 365 NYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPLHCS 423
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 484
YFMGLQRKQGVP EGEQFDIR TV+EFK V+ YTL PGM+ISV H+ RR+LPNFVFP
Sbjct: 424 YFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFP 483
Query: 485 GGVRPSRPSKGTWDSRRALERK----------------VSSHTKPGAD---DGRKRKQTD 525
GGVRPS SKGTWDS R E + +SS +K G++ DG+KRK D
Sbjct: 484 GGVRPSHTSKGTWDSNRRSEHRNSSTSSAPAATTTTTEMSSESKAGSNSPVDGKKRKWGD 543
Query: 526 DNVDT-HLRNAKCHA-TMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKV 583
T RN+K A ++P + E +P + +I SS +
Sbjct: 544 SETLTDQPRNSKHIAVSVPVENCEGGSPNPSVGSICSSPM-------------------- 583
Query: 584 ENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKD-AEKLAIEKIMSGP 642
+ NGK + P+ DP ++F SKD E L IEKI +
Sbjct: 584 ---------------KDYCTNGKSE-PISKDPPENVVAF----SKDPPESLPIEKIAT-- 621
Query: 643 YVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSA 702
QA E ++LE+ + NQ + + ++A AT+ S+ S
Sbjct: 622 ---PQAH--ETEELEESFDFGNQVIE--------QISHKVAVLSATATIPPFEATSNGSP 668
Query: 703 LSPNGGLGELEVL 715
P + ELEVL
Sbjct: 669 F-PYEAVEELEVL 680
>gi|356511273|ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
max]
Length = 702
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/672 (63%), Positives = 516/672 (76%), Gaps = 26/672 (3%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
QRLGITEPISL GPT+ D+++TR+LEKYL+D LYE+Q+EAV EVLGRLDQIVKIWVK
Sbjct: 15 QRLGITEPISLGGPTEYDVIKTRELEKYLQDAGLYENQQEAVX--EVLGRLDQIVKIWVK 72
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
ISRAKGLN QL+QEANAKIFTFGSY LGVH PGA+IDTLCVGPRHA+R+EDFFG+LH+M
Sbjct: 73 IISRAKGLNKQLVQEANAKIFTFGSYXLGVHSPGANIDTLCVGPRHASRDEDFFGDLHRM 132
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L++MPEVTELHPVPDAHVPVM+FKF+GV IDLLYA+LSL VIPEDLDISQ+ ILQNADE+
Sbjct: 133 LSKMPEVTELHPVPDAHVPVMRFKFNGVYIDLLYAKLSLRVIPEDLDISQELILQNADEE 192
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSN--VAGFLGGINWALLVA 244
TV SLNGCRVTD++L +QNF TTLRCM+FWAK GVY V +LGGINWALLVA
Sbjct: 193 TVCSLNGCRVTDKVL-----LQNFCTTLRCMKFWAKHCGVYXKNFVTSYLGGINWALLVA 247
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
R C L+PNA+P+MLVSRFFRVYTQW WPNPV+LCAIEEGS+GLQ+WDPRR P D++HLMP
Sbjct: 248 RTCXLFPNALPNMLVSRFFRVYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYPNDRFHLMP 307
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITPAY CMNSSYNVS+ TL IM +EFQRG+EICE ++ D+ W + F +YK
Sbjct: 308 IITPAYACMNSSYNVSSITLCIMTEEFQRGNEICEYFAQD--DLTWAFKLK-FPCSNSYK 364
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 424
NYL+IDIS ENADDLR WKGWVES LRQL L+IERH Y MLQCHPHPGD SDKS+P +CS
Sbjct: 365 NYLQIDISGENADDLRKWKGWVESHLRQLRLQIERHIYGMLQCHPHPGDSSDKSRPFHCS 424
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 484
FM LQRKQGVPV +G QFDIRLTV+EFK +V++YTL PGM + V HV RN+P FVFP
Sbjct: 425 NFMALQRKQGVPVNDGGQFDIRLTVEEFKHSVNIYTLWIPGMDVHVPHVKHRNIPTFVFP 484
Query: 485 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 544
G VRPS PSK TW+ +++ E K++ GA+D RKRKQ +D+VD+ LRN+K A++P S
Sbjct: 485 GSVRPSHPSKVTWEIKKSQEGKMAVL---GANDDRKRKQAEDSVDS-LRNSKSMASLPPS 540
Query: 545 SGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHN 604
S E E +S SS + + + N + EK + + G R + + N
Sbjct: 541 SREVHEDENPISPASSCFV--KSNDSEINSTSEQQSEKPDLKSSGECPGDRETNGSVTSN 598
Query: 605 GKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKN 664
+V+ + ++S+SK+AEKLAIEKIM GPY A Q F E D+LEDDLE +N
Sbjct: 599 LQVNAALTAT--------DTSSSKEAEKLAIEKIMCGPYDAQQVFSGEPDELEDDLEFRN 650
Query: 665 QAKDFAGSTQNN 676
Q KDF G +N+
Sbjct: 651 QVKDFGGKMKNS 662
>gi|148910690|gb|ABR18412.1| unknown [Picea sitchensis]
Length = 712
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/491 (78%), Positives = 437/491 (89%), Gaps = 2/491 (0%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
SNGQ LG+TEPISL GP++ D ++T +LEK+L LYESQEEAV REEVLGRLDQIVK+
Sbjct: 11 SNGQYLGVTEPISLGGPSEFDYIKTAELEKFLVSAGLYESQEEAVRREEVLGRLDQIVKV 70
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
WV+KISR KG +Q++QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF EL
Sbjct: 71 WVRKISRNKGFGEQVVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFIEL 130
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
++ML +MPEVTELHPVPDAHVPVMKFKF+G+SIDLLYA+LSLWVIPEDLDISQDSIL+NA
Sbjct: 131 YEMLADMPEVTELHPVPDAHVPVMKFKFNGISIDLLYAKLSLWVIPEDLDISQDSILRNA 190
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DEQTVRSLNGCRVTDQILRLVP IQNFRTTLRCM+ WAKRRGVYSNVAGFLGG+NWALLV
Sbjct: 191 DEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMKLWAKRRGVYSNVAGFLGGVNWALLV 250
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA+PSMLV RFFRVYTQWRWPNPV+LCAIEEG LGL VWDPR+NP+D+ H M
Sbjct: 251 ARICQLYPNALPSMLVCRFFRVYTQWRWPNPVMLCAIEEGPLGLPVWDPRKNPRDRLHQM 310
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PIITPAYPCMNSSYNVS+STLR+M +EFQR ++ICE +E N+ V W+ LFE + FFEAY
Sbjct: 311 PIITPAYPCMNSSYNVSSSTLRVMTEEFQRSNQICEELELNK--VCWNILFETYPFFEAY 368
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 423
KNYL IDISAE ADDLR WKGW ESRLR LTLKIER T+ MLQCHPHP DFSD +P +C
Sbjct: 369 KNYLEIDISAEGADDLRKWKGWTESRLRLLTLKIERQTFGMLQCHPHPDDFSDPQRPYHC 428
Query: 424 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 483
+FMGLQRKQG+P+ EGEQFDIR+TV EF+ +V MYTL K GM+I+V+H+ RRN+P FVF
Sbjct: 429 CFFMGLQRKQGMPIQEGEQFDIRVTVDEFRHSVKMYTLWKQGMEINVSHIRRRNIPLFVF 488
Query: 484 PGGVRPSRPSK 494
PGGVRP R +K
Sbjct: 489 PGGVRPPRTTK 499
>gi|297737752|emb|CBI26953.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/709 (61%), Positives = 506/709 (71%), Gaps = 50/709 (7%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG++EPIS AGPT+ DL++TR+LEK+L D LYE++EEA+ REEVLGR+DQIVK+WVK +
Sbjct: 15 LGVSEPISTAGPTEFDLIKTRELEKFLADSGLYETREEAIRREEVLGRVDQIVKVWVKTV 74
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
SRAKG N+QL+ EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR+EDFFGELH+ML
Sbjct: 75 SRAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLA 134
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
E PEV ELHPVPDAHVPVMKFKF+GVSIDLLYARLSLWVIPEDLDISQ++ILQN DEQTV
Sbjct: 135 ETPEVQELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTV 194
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQ
Sbjct: 195 RSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQ 254
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNAVPS LVSRFFRVYTQWRWPNPV+LC IEE LGL VWDPRRN KD+ HLMPIITP
Sbjct: 255 LYPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITP 314
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP MNSSYNVS STLRIM +E QRG+EI + ME + W TLFEPF FFEAYKNYL+
Sbjct: 315 AYPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETE--NTGWITLFEPFLFFEAYKNYLQ 372
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMG 428
IDI+AEN DLRNWKGWVESRLR LT KIER T MLQCHPHP +FSD S+ + YFMG
Sbjct: 373 IDITAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSFHYCYFMG 432
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
L+RK+G EGEQFDIRLTV +FK V MY+ K GM I V H+ R+N+PNFVFPGGVR
Sbjct: 433 LRRKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVR 492
Query: 489 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEF 548
P +P K + + +KP + +KRK+ + + +H
Sbjct: 493 PPQPMKVAGEQGQV--------SKPMGFNSQKRKRDEIDAGSHP---------------- 528
Query: 549 REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNG-KV 607
RE + ++ + S +LQ E E+VE N+ DS+ S E SSHN ++
Sbjct: 529 RESTSLVENVES---DLQGE---------VKLEQVEVNVGDSLTKVICSSENSSHNSIEL 576
Query: 608 DGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAK 667
+G S S + L IE S P V Q E+ E + L +Q +
Sbjct: 577 EGYARCSQPLGAASSASGSLSLGRALVIETT-SEPLV-HQCSSKEVG--ESQVGLVDQVQ 632
Query: 668 DFAGSTQNNSLGSCAVNIAAEATLTSMNGG---SSSSALSPNGGLGELE 713
+F + N C + AE + + G S S+L NGGL ELE
Sbjct: 633 NFDVGKRVN----CVQSSTAERGMAAAAAGQGFSPCSSLFQNGGLEELE 677
>gi|359472651|ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 587
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/527 (73%), Positives = 438/527 (83%), Gaps = 10/527 (1%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG++EPIS AGPT+ DL++TR+LEK+L D LYE++EEA+ REEVLGR+DQIVK+WVK +
Sbjct: 15 LGVSEPISTAGPTEFDLIKTRELEKFLADSGLYETREEAIRREEVLGRVDQIVKVWVKTV 74
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
SRAKG N+QL+ EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR+EDFFGELH+ML
Sbjct: 75 SRAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLA 134
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
E PEV ELHPVPDAHVPVMKFKF+GVSIDLLYARLSLWVIPEDLDISQ++ILQN DEQTV
Sbjct: 135 ETPEVQELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTV 194
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQ
Sbjct: 195 RSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQ 254
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNAVPS LVSRFFRVYTQWRWPNPV+LC IEE LGL VWDPRRN KD+ HLMPIITP
Sbjct: 255 LYPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITP 314
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP MNSSYNVS STLRIM +E QRG+EI + ME + W TLFEPF FFEAYKNYL+
Sbjct: 315 AYPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETE--NTGWITLFEPFLFFEAYKNYLQ 372
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMG 428
IDI+AEN DLRNWKGWVESRLR LT KIER T MLQCHPHP +FSD S+ + YFMG
Sbjct: 373 IDITAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSFHYCYFMG 432
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
L+RK+G EGEQFDIRLTV +FK V MY+ K GM I V H+ R+N+PNFVFPGGVR
Sbjct: 433 LRRKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVR 492
Query: 489 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNA 535
P +P K + + +KP + +KRK+ + + +H R +
Sbjct: 493 PPQPMKVAGEQGQV--------SKPMGFNSQKRKRDEIDAGSHPRES 531
>gi|302804859|ref|XP_002984181.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
Length = 496
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/498 (73%), Positives = 425/498 (85%), Gaps = 4/498 (0%)
Query: 1 MGSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
M SNG++ LG+TEPIS AGPT+ D RTR LEK L + LYES EEAV REEVLGRLDQ
Sbjct: 1 MAQSNGKKYLGVTEPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQ 60
Query: 60 IVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF 119
+VK WVK I KG ++Q+ QEANAKIFTFGSYRLGVHGPG DIDTLCVGPRH +REEDF
Sbjct: 61 LVKEWVKNICLRKGYSEQVTQEANAKIFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDF 120
Query: 120 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 179
FG H ML M EVTELHPVPDAHVPVM+FKFSG+SIDLLYA L++W IPEDLDISQ+SI
Sbjct: 121 FGVFHGMLEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESI 180
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+N DE +VRSLNGCRVTDQILRLVP I++FRTTLRCM+ WA++RGVYSNV GFLGG+NW
Sbjct: 181 LRNLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNW 240
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
ALLVARICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC IEEGSLGL VWDPR+NP+D+
Sbjct: 241 ALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDR 300
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
H MPIITPAYPCMNSSYNVS+STLR+M++EF R + ICE +E N+A +W LFEP+ F
Sbjct: 301 THQMPIITPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKA--EWSALFEPYAF 358
Query: 360 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK 419
F+AYKNYL+ID+ A + DDLR WKGWVESRLRQLTLKIE+HTY MLQCHPHP DF D+SK
Sbjct: 359 FDAYKNYLQIDVFAADNDDLRRWKGWVESRLRQLTLKIEKHTYGMLQCHPHPCDFVDESK 418
Query: 420 P-LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 478
+C++FMGLQ++QG+P EG+QFDIRLTV+EF+Q+V+ Y L K GM I+V+HV RR +
Sbjct: 419 EGKHCAFFMGLQKRQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQI 478
Query: 479 PNFVFPGGVRPSRPSKGT 496
P +VFPGG +P+RP K T
Sbjct: 479 PAYVFPGGTKPARPPKVT 496
>gi|302780986|ref|XP_002972267.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
Length = 548
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/512 (72%), Positives = 430/512 (83%), Gaps = 11/512 (2%)
Query: 1 MGSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
M SNG++ LG+TEPIS AGPT+ D RTR LEK L + LYES EEAV REEVLGRLDQ
Sbjct: 1 MAQSNGKKYLGVTEPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQ 60
Query: 60 IVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF 119
+VK WVK I KG ++QL QEANAKIFTFGSYRLGVHGPG DIDTLCVGPRH +REEDF
Sbjct: 61 LVKEWVKNICLRKGYSEQLTQEANAKIFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDF 120
Query: 120 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 179
FG H ML M EVTELHPVPDAHVPVM+FKFSG+SIDLLYA L++W IPEDLDISQ+SI
Sbjct: 121 FGVFHGMLEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESI 180
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+N DE +VRSLNGCRVTDQILRLVP I++FRTTLRCM+ WA++RGVYSNV GFLGG+NW
Sbjct: 181 LRNLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNW 240
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
ALLVARICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC IEEGSLGL VWDPR+NP+D+
Sbjct: 241 ALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDR 300
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
H MPIITPAYPCMNSSYNVS+STLR+M++EF R + ICE +E N+A +W LFEP+ F
Sbjct: 301 THQMPIITPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKA--EWSALFEPYAF 358
Query: 360 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK------IERHTYNMLQCHPHPGD 413
F+AYKNYL+ID+ A + DDLR WKGWVESRLRQLTLK IE+HTY MLQCHPHP D
Sbjct: 359 FDAYKNYLQIDVFAADNDDLRRWKGWVESRLRQLTLKVGLDREIEKHTYGMLQCHPHPCD 418
Query: 414 FSDKSKP-LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAH 472
F D+SK +C++FMGLQ++QG+P EG+QFDIRLTV+EF+Q+V+ Y L K GM I+V+H
Sbjct: 419 FVDESKEGKHCAFFMGLQKRQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSH 478
Query: 473 VTRRNLPNFVFPGGVRPSRPSKGTWDSRRALE 504
V RR +P +VFPGG +P+RP K + SR+A E
Sbjct: 479 VRRRQIPAYVFPGGTKPARPPKLS-SSRKARE 509
>gi|357138719|ref|XP_003570937.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 760
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/712 (56%), Positives = 484/712 (67%), Gaps = 43/712 (6%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M SN LG++EPISL+GPT+ D+M+T ++EK+L D LYESQEEAVSREEVLG+LDQ
Sbjct: 22 MAKSNTGYLGVSEPISLSGPTEKDVMQTTEVEKFLADAGLYESQEEAVSREEVLGKLDQT 81
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK W+KK +RA G +Q +QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR + FF
Sbjct: 82 VKTWIKKATRASGYGEQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFF 141
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
LH ML EMPEV+ELHPVPDAHVPV+ FK GVSIDLLYA L+ VIPEDLD+SQDSIL
Sbjct: 142 RCLHDMLAEMPEVSELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPEDLDLSQDSIL 201
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
N DEQ VRSLNGCRVTDQILRLVP I +FRTTLR MR+W KRRGVYSNV GFLGGINWA
Sbjct: 202 HNVDEQAVRSLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWA 261
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVARICQLYPNA PSML+SRFFRVY+QW+WPNPV LC IEEG LGL VWDPRRN +D+
Sbjct: 262 ILVARICQLYPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRG 321
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYPCMNSSYNVS ST +M+ EF RG+EIC+A+++N A WD LFEP+ FF
Sbjct: 322 HQMPIITPAYPCMNSSYNVSVSTRYVMVQEFTRGYEICQAIDENRA--TWDDLFEPYPFF 379
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 420
E Y+NYL + ISA N DDLRNWKGWVESRLR L LK ER+T+ ML HPHP DFSD S+P
Sbjct: 380 ELYRNYLEVVISARNEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRP 439
Query: 421 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 480
L+ YFMGL RKQ V E EQFDIR V EFK +V Y R GM I V+HV R+++P
Sbjct: 440 LHSFYFMGLWRKQTVQPQEAEQFDIRGIVNEFKSSVCAYAHRGEGMDIEVSHVKRKDIPL 499
Query: 481 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 540
FVFPGGVRP R S+ + A+ R S G + + T
Sbjct: 500 FVFPGGVRPPRSSRTAGRNGHAVSRNDVSADADGQVGNPLVTEGWSDPPTQ--------- 550
Query: 541 MPSSSGEFREGSPIMSTISSSSINLQFEHM---DAN------------ELAGSNREKVEN 585
PS+ + E + +++ ++S N + +H+ D+N GS V+N
Sbjct: 551 GPSAGYQLPENTSLLANLASRLSNNETQHILNGDSNLHTESVEHEHPVRFLGSTSAPVDN 610
Query: 586 NLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIM-SGPYV 644
+ D I+ NS+ +S NG GP G G+SFNSS+ K+++ + + ++ S P
Sbjct: 611 AVLDVIKPP-NSIPSTSSNG---GPTNG----LGISFNSSH-KESKGIHVNNLVTSSPTT 661
Query: 645 ADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNG 696
D L Q + D K A + + L C+ +A S +G
Sbjct: 662 TDGLDELVWPQAKSD-------KIHANTAHVSPLEGCSGTSLGQAVNLSSHG 706
>gi|297605720|ref|NP_001057507.2| Os06g0319600 [Oryza sativa Japonica Group]
gi|255676996|dbj|BAF19421.2| Os06g0319600, partial [Oryza sativa Japonica Group]
Length = 769
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/504 (70%), Positives = 413/504 (81%), Gaps = 3/504 (0%)
Query: 3 SSNGQ-RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
S+NG LG+TEPISL+GPT+ D++RT+++EK L D LYESQEEAVSREEVLG+LDQIV
Sbjct: 25 SNNGNGYLGVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIV 84
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K W+KK +RA G DQ +QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR E FF
Sbjct: 85 KAWIKKATRASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQ 144
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
L+ ML +MPEVTELHPVPDAHVPV+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL
Sbjct: 145 ALYDMLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILH 204
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N DEQTVRSLNGCRVTD+ILRLVP I FRTTLR MRFWAKRRGVYSNV GFLGGINWAL
Sbjct: 205 NVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWAL 264
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVARICQLYPNA PSML+SRFF+VY++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H
Sbjct: 265 LVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGH 324
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPIITPAYP MNSSYNVS ST +M+ EF R +IC+A+++ +A DWD LFEP+ FFE
Sbjct: 325 HMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKA--DWDALFEPYPFFE 382
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
+Y+NYL+I+I+A N DDLRNWKGWVESRLR L LKIER T ML HP+P DF D S+PL
Sbjct: 383 SYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL 442
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
+C YFMGL +KQ E EQ+DIR V EFK + Y + GM+I V+HV R+++P+F
Sbjct: 443 HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSF 502
Query: 482 VFPGGVRPSRPSKGTWDSRRALER 505
VFPGG+RPSRPS+ RA+ R
Sbjct: 503 VFPGGIRPSRPSRTVGKEARAVSR 526
>gi|222635475|gb|EEE65607.1| hypothetical protein OsJ_21148 [Oryza sativa Japonica Group]
Length = 748
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/504 (70%), Positives = 413/504 (81%), Gaps = 3/504 (0%)
Query: 3 SSNGQ-RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
S+NG LG+TEPISL+GPT+ D++RT+++EK L D LYESQEEAVSREEVLG+LDQIV
Sbjct: 4 SNNGNGYLGVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIV 63
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K W+KK +RA G DQ +QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR E FF
Sbjct: 64 KAWIKKATRASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQ 123
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
L+ ML +MPEVTELHPVPDAHVPV+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL
Sbjct: 124 ALYDMLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILH 183
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N DEQTVRSLNGCRVTD+ILRLVP I FRTTLR MRFWAKRRGVYSNV GFLGGINWAL
Sbjct: 184 NVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWAL 243
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVARICQLYPNA PSML+SRFF+VY++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H
Sbjct: 244 LVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGH 303
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPIITPAYP MNSSYNVS ST +M+ EF R +IC+A+++ +A DWD LFEP+ FFE
Sbjct: 304 HMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKA--DWDALFEPYPFFE 361
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
+Y+NYL+I+I+A N DDLRNWKGWVESRLR L LKIER T ML HP+P DF D S+PL
Sbjct: 362 SYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL 421
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
+C YFMGL +KQ E EQ+DIR V EFK + Y + GM+I V+HV R+++P+F
Sbjct: 422 HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSF 481
Query: 482 VFPGGVRPSRPSKGTWDSRRALER 505
VFPGG+RPSRPS+ RA+ R
Sbjct: 482 VFPGGIRPSRPSRTVGKEARAVSR 505
>gi|218198073|gb|EEC80500.1| hypothetical protein OsI_22746 [Oryza sativa Indica Group]
Length = 748
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/504 (70%), Positives = 413/504 (81%), Gaps = 3/504 (0%)
Query: 3 SSNGQ-RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
S+NG LG+TEPISL+GPT+ D++RT+++EK L D LYESQEEAVSREEVLG+LDQIV
Sbjct: 4 SNNGNGYLGVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIV 63
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K W+KK +RA G DQ +QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR E FF
Sbjct: 64 KAWIKKATRASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQ 123
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
L+ ML +MPEVTELHPVPDAHVPV+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL
Sbjct: 124 ALYDMLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILH 183
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N DEQTVRSLNGCRVTD+ILRLVP I FRTTLR MRFWAKRRGVYSNV GFLGGINWAL
Sbjct: 184 NVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWAL 243
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVARICQLYPNA PSML+SRFF+VY++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H
Sbjct: 244 LVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGH 303
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPIITPAYP MNSSYNVS ST +M+ EF R +IC+A+++ +A DWD LFEP+ FFE
Sbjct: 304 HMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKA--DWDALFEPYPFFE 361
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
+Y+NYL+I+I+A N DDLRNWKGWVESRLR L LKIER T ML HP+P DF D S+PL
Sbjct: 362 SYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL 421
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
+C YFMGL +KQ E EQ+DIR V EFK + Y + GM+I V+HV R+++P+F
Sbjct: 422 HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSF 481
Query: 482 VFPGGVRPSRPSKGTWDSRRALER 505
VFPGG+RPSRPS+ RA+ R
Sbjct: 482 VFPGGIRPSRPSRTVGKEARAVSR 505
>gi|58220769|gb|AAW68016.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 748
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/504 (70%), Positives = 412/504 (81%), Gaps = 3/504 (0%)
Query: 3 SSNGQ-RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
S+NG LG+TEPISL+GPT+ D++RT+++EK L D LYESQEEAVSREEVLG+LDQIV
Sbjct: 4 SNNGNGYLGVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIV 63
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K W+KK +RA G DQ +QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR E FF
Sbjct: 64 KAWIKKATRASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQ 123
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
L+ ML +MPEVTELHPVPDAHVPV+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL
Sbjct: 124 ALYDMLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILH 183
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N DEQTVRSLNGCRVTD+ILRLVP I FRTTLR +RFWAKRRGVYSNV GFLGGINWAL
Sbjct: 184 NVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRSLRFWAKRRGVYSNVIGFLGGINWAL 243
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVARICQLYPNA PSML+SRFF+VY++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H
Sbjct: 244 LVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGH 303
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPIITPAYP MNSSYNVS ST +M+ EF R +IC+A+++ EA DWD LFEP+ FFE
Sbjct: 304 HMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDEREA--DWDALFEPYPFFE 361
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
+Y+NYL+I+I+A N DDLRNWKGWVESRLR L LKIER T ML HP+P DF D S+PL
Sbjct: 362 SYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL 421
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
+C YFMGL +KQ E EQ+DIR V EFK + Y + GM+I V+HV R+++P+F
Sbjct: 422 HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSF 481
Query: 482 VFPGGVRPSRPSKGTWDSRRALER 505
VFPG +RPSRPS+ RA+ R
Sbjct: 482 VFPGRIRPSRPSRTVGKEARAVSR 505
>gi|326517509|dbj|BAK03673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/507 (70%), Positives = 405/507 (79%), Gaps = 2/507 (0%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M SN LG++EPISL+GPT+ D+++T ++EK+L D LYESQEEAVSREEVLG+LDQ
Sbjct: 1 MAKSNTGYLGVSEPISLSGPTEKDVVQTAEVEKFLADAGLYESQEEAVSREEVLGKLDQT 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK W+KK +R G DQ + EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR + FF
Sbjct: 61 VKTWIKKATRVSGYGDQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFF 120
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
LH ML EMPEV+ELHPVPDAHVPV+ FK GVSIDLLYA L+ VIP+DLD+SQDSIL
Sbjct: 121 RCLHDMLAEMPEVSELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPDDLDLSQDSIL 180
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
N DEQ VRSLNGCRVTDQILRLVP I +FRTTLR MR+W KRRGVYSNV GFLGGINWA
Sbjct: 181 HNVDEQAVRSLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWA 240
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVARICQLYPNA PSML+SRFFRVY+QW+WPNPV LC IEEG LGL VWDPRRN +D+
Sbjct: 241 ILVARICQLYPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRG 300
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYPCMNSSYNVSTST +M+ EF RG+EIC+A+++N A WD LFEP+ FF
Sbjct: 301 HQMPIITPAYPCMNSSYNVSTSTRYVMIQEFTRGYEICQAIDENRA--TWDDLFEPYPFF 358
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 420
E YKNYL + I+A + DDLRNWKGWVESRLR L LK ER+T+ ML HPHP DFSD S+P
Sbjct: 359 ELYKNYLEVGITARSEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRP 418
Query: 421 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 480
L+ YFMGL RKQ E EQFDIR V EFK AV Y R+ GM I V+HV R+++P
Sbjct: 419 LHSFYFMGLWRKQTAQPQEAEQFDIRGIVNEFKSAVLAYAHRREGMDIEVSHVKRKDIPL 478
Query: 481 FVFPGGVRPSRPSKGTWDSRRALERKV 507
FVFPGGVRP R S+ S R + R V
Sbjct: 479 FVFPGGVRPPRSSRTAARSSRTVSRNV 505
>gi|302770018|ref|XP_002968428.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
gi|300164072|gb|EFJ30682.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
Length = 534
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/516 (70%), Positives = 421/516 (81%), Gaps = 10/516 (1%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAK 72
EP+S AGPT DL RTR LEK L + L ES+EEA+ RE VLGRLDQIVK WV++I K
Sbjct: 2 EPLSTAGPTPADLGRTRDLEKLLSNAGLNESREEAMKREGVLGRLDQIVKSWVRQICVNK 61
Query: 73 GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 132
G +++++QEANAKIFTFGSYRLGVHGPG+DIDTLCVGP HATREEDFF ELH +L E
Sbjct: 62 GFSNEVVQEANAKIFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAETEN 121
Query: 133 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 192
VTEL+PVP+AHVPVMKFKF G+SIDLLYARLS W IPEDLDIS +SI+QN DEQ+V SLN
Sbjct: 122 VTELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLSLN 181
Query: 193 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 252
GCRVTDQILRLVP IQ+FRTTLRCM++WAKRRGVYSNV GFLGGINWALLVARICQLYPN
Sbjct: 182 GCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLYPN 241
Query: 253 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLG-LQVWDPRRNPKDKYHLMPIITPAY 310
AVPS LVSRFFRVYTQWRWPNPV+LC IEE SLG LQVWDPR+NP+DK HLMPIITPAY
Sbjct: 242 AVPSTLVSRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAY 301
Query: 311 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 370
PCMNSSYNVSTSTLRIM EF RG+E+CE +E + A WD LFE F+FFEAY+NYL+ID
Sbjct: 302 PCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRA--TWDLLFESFSFFEAYRNYLQID 359
Query: 371 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY-CSYFMGL 429
+ A + D R WKGWVESRLRQLTLK+E+ TY MLQCHPHP DF D ++ Y C+YFMGL
Sbjct: 360 VVAIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGL 419
Query: 430 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 489
QRK G P+ EG+QFDIR TV++FK V+ YT KPGM+I V+HV R+ +P FV+PGGV+P
Sbjct: 420 QRKLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKPGMEIYVSHVRRKQIPLFVYPGGVKP 479
Query: 490 SRPSKG-----TWDSRRALERKVSSHTKPGADDGRK 520
+RP++ + DS++ RK + PG +K
Sbjct: 480 ARPARQHSGSPSSDSKQGDSRKRLTSADPGGHCSKK 515
>gi|242038623|ref|XP_002466706.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
gi|241920560|gb|EER93704.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
Length = 750
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/543 (66%), Positives = 413/543 (76%), Gaps = 16/543 (2%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
+N LG+TEPISL+GPTD DLM+T ++EKYL D LYESQ+EAV REEVLG+LDQ V
Sbjct: 4 AKTNNGYLGVTEPISLSGPTDKDLMQTTEVEKYLSDAGLYESQDEAVLREEVLGKLDQTV 63
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K W+KK +R G +Q + EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR E FF
Sbjct: 64 KAWIKKATRISGYGEQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFR 123
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
LH ML EMPEV+ELHPVPDAHVPV+ FK +GVSIDLLYA L+ VIPEDLD+SQDSIL
Sbjct: 124 WLHDMLAEMPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILN 183
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N DEQTVRSLNGCRVTDQILRLVP I +FRTTLR +R+W KRRGVYSNV GFLGGINWA+
Sbjct: 184 NVDEQTVRSLNGCRVTDQILRLVPNILSFRTTLRFIRYWGKRRGVYSNVMGFLGGINWAI 243
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LV RICQLYPNA PSML+SRFFRVY++W+WPNPV+LC IEEG LGL VWDPRRN +D+ H
Sbjct: 244 LVGRICQLYPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGH 303
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPIITPAYPCMNSSYNVS ST +M EF R EIC+A+++ +A DWD LFEP+ FFE
Sbjct: 304 QMPIITPAYPCMNSSYNVSVSTRYVMTQEFTRAFEICQAIDEGKA--DWDALFEPYPFFE 361
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
+YKNYL ++I+A N D+LR+WKGWVESRLR L LKIER+++ M+ HP+P DFSDKS+PL
Sbjct: 362 SYKNYLEVNITARNEDELRSWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPL 421
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
+C YFMGL RKQ E EQFDIR V EFK + Y K GM I V+HV R+ +P F
Sbjct: 422 HCFYFMGLWRKQTTQTQEAEQFDIRGIVNEFKNTICAYQQWKEGMDIEVSHVKRKEIPLF 481
Query: 482 VFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM 541
VFPGGVRPSR S+ + R T P D DD V L A C
Sbjct: 482 VFPGGVRPSRSSRTAHKNSR---------TVPTCD-----VSADDQVGNLLGVASCSDAQ 527
Query: 542 PSS 544
P S
Sbjct: 528 PVS 530
>gi|302774344|ref|XP_002970589.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
gi|300162105|gb|EFJ28719.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
Length = 534
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/516 (69%), Positives = 420/516 (81%), Gaps = 10/516 (1%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAK 72
EP+S AGPT DL RTR LEK L + L ES+EEA+ RE VLGRLDQIVK WV++I K
Sbjct: 2 EPLSTAGPTPADLGRTRDLEKLLSNAGLNESREEAMKREGVLGRLDQIVKSWVRQICVNK 61
Query: 73 GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 132
G +++++QEANAKIFTFGSYRLGVHGPG+DIDTLCVGP HATREEDFF ELH +L E
Sbjct: 62 GFSNEVVQEANAKIFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAETEN 121
Query: 133 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 192
VTEL+PVP+AHVPVMKFKF G+SIDLLYARLS W IPEDLDIS +SI+QN DEQ+V SLN
Sbjct: 122 VTELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLSLN 181
Query: 193 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 252
GCRVTDQILRLVP IQ+FRTTLRCM++WAKRRGVYSNV GFLGGINWALLVARICQLYPN
Sbjct: 182 GCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLYPN 241
Query: 253 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLG-LQVWDPRRNPKDKYHLMPIITPAY 310
AVPS L+SRFFRVYTQWRWPNPV+LC IEE SLG LQVWDPR+NP+DK HLMPIITPAY
Sbjct: 242 AVPSTLISRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAY 301
Query: 311 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 370
PCMNSSYNVSTSTLRIM EF RG+E+CE +E + A WD LFE F+FFEAY+NYL+ID
Sbjct: 302 PCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRA--TWDLLFESFSFFEAYRNYLQID 359
Query: 371 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY-CSYFMGL 429
+ A + D R WKGWVESRLRQLTLK+E+ TY MLQCHPHP DF D ++ Y C+YFMGL
Sbjct: 360 VVAIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGL 419
Query: 430 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 489
QRK G P+ EG+QFDIR TV++FK V+ YT K GM+I V+HV R+ +P FV+PGGV+P
Sbjct: 420 QRKLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKQGMEIYVSHVRRKQIPLFVYPGGVKP 479
Query: 490 SRPSKG-----TWDSRRALERKVSSHTKPGADDGRK 520
+RP++ + DS++ RK + PG +K
Sbjct: 480 ARPARQHSGSPSSDSKQGDSRKRLTSADPGGHCSKK 515
>gi|414872023|tpg|DAA50580.1| TPA: hypothetical protein ZEAMMB73_982818 [Zea mays]
Length = 745
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/506 (68%), Positives = 407/506 (80%), Gaps = 3/506 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+TEPISL+GPT+ DLM+T ++EKYL D LYE Q+EA+ REEVLG+LDQ VK W+KK +
Sbjct: 12 GVTEPISLSGPTEKDLMQTAEVEKYLSDAGLYERQDEAILREEVLGKLDQTVKAWIKKAT 71
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
R G +Q + EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR E FF LH +L E
Sbjct: 72 RISGYGEQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFRWLHDILAE 131
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
MPEV+ELHPVPDAHVPV+ FK +GVSIDLLYA L+ VIPEDLD+SQDSIL N DEQTVR
Sbjct: 132 MPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILHNVDEQTVR 191
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTDQILRLVP I +FRTTLR +R W KRRGVYSNV GFLGGINWA+LV RICQL
Sbjct: 192 SLNGCRVTDQILRLVPNILSFRTTLRFIRCWGKRRGVYSNVMGFLGGINWAILVGRICQL 251
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA PSML+SRFFRVY++W+WPNPV+LC IEEG LGL VWDPRRN +D+ H MPIITPA
Sbjct: 252 YPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPA 311
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS ST +M+ EF + EIC+A+++ +A DWD LFEP+ FFE+YKNYL +
Sbjct: 312 YPCMNSSYNVSVSTRYVMVQEFTQAFEICQAIDEGKA--DWDALFEPYPFFESYKNYLEV 369
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 429
+I+A N DDLRNWKGWVESRLR L LKIER+++ M+ HP+P DFSDKS+PL+ YFMGL
Sbjct: 370 NITARNEDDLRNWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPLHIFYFMGL 429
Query: 430 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 489
RKQ E EQFDIR V EFK + Y RK GM I V+HV R+ +P FVFPGGVRP
Sbjct: 430 WRKQTTQAQETEQFDIRGIVNEFKNTICAYQHRKEGMDIEVSHVKRKEIPLFVFPGGVRP 489
Query: 490 SRPSKGTWDSRRAL-ERKVSSHTKPG 514
SR S+ T + RA+ R VS+ + G
Sbjct: 490 SRTSRTTHKNSRAIPTRDVSADDQVG 515
>gi|224284360|gb|ACN39915.1| unknown [Picea sitchensis]
Length = 701
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/491 (67%), Positives = 413/491 (84%), Gaps = 3/491 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GIT+PISL+GP+ DL R+R+LE++L LYES+EE+ REEVL ++DQIVK WVK
Sbjct: 18 RQYGITKPISLSGPSGSDLQRSRELEEFLVSAGLYESEEESALREEVLAQIDQIVKQWVK 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+++R KG +Q+++E+NAK+FTFGSYRLGVHGPGADIDTLCVGP +A +EEDFF LH M
Sbjct: 78 QLTREKGYTEQMVEESNAKVFTFGSYRLGVHGPGADIDTLCVGPEYADQEEDFFILLHDM 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EMPEV EL+ VPDAHVPVMKFKF G+SIDLLYA ++L ++P+DLDISQ+S+L N DEQ
Sbjct: 138 LAEMPEVMELNRVPDAHVPVMKFKFRGISIDLLYASVALRIVPDDLDISQESVLYNVDEQ 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRSLNGCRV +QILRLVP +++FRTTLRCM+FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 198 TVRSLNGCRVNEQILRLVPNVEHFRTTLRCMKFWAKRRGVYSNVTGFLGGVNWALLVARV 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+PSMLVSRFFRV+TQWRWPNPV+L +I+E LG VWDPR+NP+D+ H MPII
Sbjct: 258 CQLYPNAIPSMLVSRFFRVFTQWRWPNPVMLRSIKEEELGFPVWDPRKNPRDRTHHMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP MNSSYNVSTSTLR+M ++FQ+G+++CE +E N+A +W LF+P+ FFEAYKNY
Sbjct: 318 TPAYPGMNSSYNVSTSTLRVMTEQFQQGNKMCEDIEMNKA--NWSALFDPYPFFEAYKNY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 425
L++DI A + DDLR WKGWVESRLRQLTLKIER T+ MLQCHP+P ++ D SK +C++
Sbjct: 376 LQVDIVAADQDDLRLWKGWVESRLRQLTLKIERDTFGMLQCHPYPTEYVDNSKQCPHCAF 435
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
FMGLQRKQGV + EG+QFDIR TV EF+Q+V MY KPGM I V+HV R+ +P++VFP
Sbjct: 436 FMGLQRKQGVLIQEGQQFDIRGTVDEFRQSVGMYMFWKPGMDIYVSHVRRKQIPSYVFPE 495
Query: 486 GVRPSRPSKGT 496
GVR R +
Sbjct: 496 GVRRVRSGRAA 506
>gi|255550972|ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta, putative [Ricinus communis]
Length = 754
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/560 (63%), Positives = 437/560 (78%), Gaps = 5/560 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+R GIT+PISLAGP++ DL+R L K+L D LYES+EE + REEVL R+DQIVK W+K
Sbjct: 25 KRYGITKPISLAGPSEADLLRNADLVKFLVDSGLYESKEENLKREEVLCRIDQIVKDWIK 84
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+++R +G +DQ++ EANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +
Sbjct: 85 QLTRQRGYSDQMVDEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFILLHDI 144
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EM E+TEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L + DEQ
Sbjct: 145 LAEMDEITELQPVPDAHVPVMKFKFQGISIDLLYASISLPVVPEDLDISHGSVLYDVDEQ 204
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 205 TVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARL 264
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPRRNP+D++H MPII
Sbjct: 265 CQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHMPII 324
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYPCMNSSYNVS STLR+MM++FQ G++ICE +E N+A W LFEP+ FFEAYKNY
Sbjct: 325 TPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEEIELNKA--QWSALFEPYLFFEAYKNY 382
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 425
L+IDI A +ADDL WKGWVESRLRQLTLKIER T MLQCHP+P ++ D SK +C++
Sbjct: 383 LQIDIIAADADDLLAWKGWVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTSKQCPHCAF 442
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
FMGLQR++GV EG+QFDIR TV+EF+Q ++MY KPGM + V+H RR LP FVFP
Sbjct: 443 FMGLQRRKGVSGQEGQQFDIRGTVEEFRQEINMYMFWKPGMDVYVSHARRRQLPAFVFPD 502
Query: 486 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSS 545
G + SR S+ + + VS+ ++ G+ +G +++ D V +R K S
Sbjct: 503 GYKRSRTSRHP-NQQAGKPSDVSATSRAGSVEGHLKRKNDHEV-VDVRPDKPEKRASVSP 560
Query: 546 GEFREGSPIMSTISSSSINL 565
+ SP +TISS +L
Sbjct: 561 QRLQSVSPESNTISSGRTSL 580
>gi|225442450|ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/489 (67%), Positives = 405/489 (82%), Gaps = 3/489 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ G+T+PIS+AGPT+ D+ R+ +LEK+L D LYES+EEA+ R EVL RL QIVK WVK
Sbjct: 17 KQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKRAEVLDRLGQIVKDWVK 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+++R +G DQ++++ANA +FTFGSYRLGVHGPG DIDTLC+GP + +REEDFF LH +
Sbjct: 77 QLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNI 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L +M EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L N DE
Sbjct: 137 LADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEP 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRSLNGCRV DQIL+LVP +++F TTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 197 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAVPSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPII
Sbjct: 257 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYPCMNSSYNVS STLR+MM++FQ G++ICE +E + A W LFEP+ FFE+YKNY
Sbjct: 317 TPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNA--QWGALFEPYLFFESYKNY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 425
L++DI A + DDLR WKGWVESRLRQLTL IER T+ LQCHP+P ++ D SK +C++
Sbjct: 375 LQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAF 434
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
FMGLQRKQG + EG+QFDIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP
Sbjct: 435 FMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPE 494
Query: 486 GVRPSRPSK 494
G + SRP +
Sbjct: 495 GYKRSRPQR 503
>gi|293335951|ref|NP_001168358.1| uncharacterized protein LOC100382126 [Zea mays]
gi|223947741|gb|ACN27954.1| unknown [Zea mays]
gi|413943856|gb|AFW76505.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 694
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/542 (62%), Positives = 425/542 (78%), Gaps = 5/542 (0%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
GS ++ GIT+P+SL GP + DL RT +LEK+L + LYES +E+ REEVLG+LDQIV
Sbjct: 4 GSDAPKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIV 63
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+++ +G DQ+++EANA +FTFGSYRLGVHGPGADIDTLCVGP + REEDFF
Sbjct: 64 KDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFI 123
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
LH +L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L
Sbjct: 124 VLHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLY 183
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
+ DE TVRSLNGCRV DQI+RLVP +NFRT LRC+++WAKRRGVYSNV GFLGG+NWAL
Sbjct: 184 DVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWAL 243
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H
Sbjct: 244 LVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCH 303
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPIITPAYPCMNSSYNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFE
Sbjct: 304 HMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNK--TSWPALFEPFQFFE 361
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
AYKNYL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+
Sbjct: 362 AYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 421
Query: 422 -YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 480
+C++FMGL RK+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P
Sbjct: 422 AHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPA 481
Query: 481 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 540
+VFP G + RPS+ + ++ + T + D + +++ D +R AK +T
Sbjct: 482 YVFPEGYKRPRPSRHV--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSST 539
Query: 541 MP 542
P
Sbjct: 540 SP 541
>gi|449480779|ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 758
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/514 (65%), Positives = 407/514 (79%), Gaps = 3/514 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T+PIS+AGP D D+ R ++LEK+L D LYES+EE+ REEVL R+ QIVK WVK+++
Sbjct: 27 GVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRIGQIVKDWVKQLT 86
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
R KG DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 87 RIKGYTDQMVEDANAAIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFYMLHNILEE 146
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EV+EL PVPDAHVPVMKFKF G+SIDLLYA +S V+PEDLDIS S+L N DE TVR
Sbjct: 147 MEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVSVLYNVDEPTVR 206
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP +++FRT LRC++FWAKRRGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 207 SLNGCRVADQILKLVPNVESFRTALRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 266
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAVPSML+SRFFRVYT WRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPIITPA
Sbjct: 267 YPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDRTHHMPIITPA 326
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVSTSTLR+MM++FQ G+++CE +E N+A W +LFEP+ FFE+YKNYL++
Sbjct: 327 YPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKA--QWSSLFEPYLFFESYKNYLQV 384
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 428
DI A +ADDLR+WKGWVESR R LTL IER T LQCHP+P ++ D SKP +C++FMG
Sbjct: 385 DIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTSKPCAHCAFFMG 444
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQRKQG + EG+QFDIR +V EFK S Y KPGM+I V+HV RR +P FVFP G +
Sbjct: 445 LQRKQGEIIQEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHK 504
Query: 489 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRK 522
R S+ + R + V + + KRK
Sbjct: 505 RFRASRLSALQRSPNQEDVQNGRSGSCERDLKRK 538
>gi|356515639|ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 732
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/602 (58%), Positives = 443/602 (73%), Gaps = 12/602 (1%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
+ G T+P+SLAGPTD DL R L+K+L D LYES EE+ +R+EVL RLDQIVK WVK+
Sbjct: 23 KYGFTKPLSLAGPTDADLQRNNDLDKFLLDSGLYESNEESAARKEVLHRLDQIVKSWVKQ 82
Query: 68 ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
++R +G DQ++++ANA IFTFGSYRLGVHGPG DIDTLC+GP + REEDFF LH +L
Sbjct: 83 LTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREEDFFIILHNIL 142
Query: 128 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 187
EM EV+EL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L + DE T
Sbjct: 143 AEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPT 202
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
VRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWA+LVARIC
Sbjct: 203 VRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARIC 262
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 307
QLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG +WDPRRNP+D++H MPIIT
Sbjct: 263 QLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIIT 322
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
PAYPCMNSSYNVS STLR+M+D+F G++IC+ +E N+A W LF+P+ FFEAYKNYL
Sbjct: 323 PAYPCMNSSYNVSASTLRVMVDQFCYGNKICDEIELNKA--QWSALFQPYIFFEAYKNYL 380
Query: 368 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYF 426
++DI A + DDL W+GWVESRLR LTLKIER T MLQCHP+P ++ D SKP + ++F
Sbjct: 381 QVDIIASDTDDLLAWRGWVESRLRMLTLKIERDTNGMLQCHPYPHEYVDTSKPCAHSAFF 440
Query: 427 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGG 486
MGLQRK+GV EG+QFDIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFP G
Sbjct: 441 MGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFPDG 500
Query: 487 VRPSR-PSKGTWDSRRALERKVSSHTKPG-ADDGRKRKQTDDNVDTHLRNAKCHATMPSS 544
+ +R P + + + + ++ PG ++ KRK + VD A++ S
Sbjct: 501 YKRTRMPRHISHQAEITGDDATNCYSGPGLSERCIKRKNYSEMVDKKPDKPDKRASI--S 558
Query: 545 SGEFREGSPIMST-ISSSSINLQFEHMDANELAGSNREKVENNL----TDSIRGSRNSVE 599
SP T S + + E + LAGS + +N +D++ GS E
Sbjct: 559 PQRLECVSPESCTGKSGGTAQMSIECIKGVRLAGSTTKDANSNCKIKSSDALPGSGLRTE 618
Query: 600 VS 601
V+
Sbjct: 619 VA 620
>gi|449461393|ref|XP_004148426.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 863
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/484 (69%), Positives = 403/484 (83%), Gaps = 4/484 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T+PISLAGP D D+ R +LEK+L D LYES+EEA REEVLGR+DQIVK WVK+++
Sbjct: 21 GVTKPISLAGPMDADIHRNIELEKFLVDSELYESKEEAAKREEVLGRIDQIVKSWVKQLT 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+G +Q++++ANA IFTFGSYRLGVHGPG+DIDTLCVGP + RE DFF LH +L E
Sbjct: 81 LLRGYTEQMVEDANAVIFTFGSYRLGVHGPGSDIDTLCVGPSYVNRE-DFFIILHNILAE 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVT+L PVPDAHVPVM+FKF G+SIDLLYA +SL V+PEDLDIS S+L N DEQTVR
Sbjct: 140 MEEVTDLQPVPDAHVPVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVDEQTVR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQILRLVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVA++CQL
Sbjct: 200 SLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAQVCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG VWDPRRNP+D++HLMPIITPA
Sbjct: 260 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVSTSTLR+MM++F+ G+ ICE ++ ++A W LFEP+ FFE YKNYL++
Sbjct: 320 YPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKA--QWSALFEPYLFFETYKNYLQV 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 428
DI A +ADDL WKGWVESR RQLTLKIER T MLQCHP+P ++SD SKP +C++FMG
Sbjct: 378 DIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMG 437
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQRK+G+ G+QFDIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFP G +
Sbjct: 438 LQRKEGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHK 497
Query: 489 PSRP 492
++P
Sbjct: 498 RAKP 501
>gi|413943854|gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943855|gb|AFW76504.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 686
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/542 (62%), Positives = 425/542 (78%), Gaps = 5/542 (0%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
GS ++ GIT+P+SL GP + DL RT +LEK+L + LYES +E+ REEVLG+LDQIV
Sbjct: 4 GSDAPKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIV 63
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+++ +G DQ+++EANA +FTFGSYRLGVHGPGADIDTLCVGP + REEDFF
Sbjct: 64 KDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFI 123
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
LH +L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L
Sbjct: 124 VLHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLY 183
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
+ DE TVRSLNGCRV DQI+RLVP +NFRT LRC+++WAKRRGVYSNV GFLGG+NWAL
Sbjct: 184 DVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWAL 243
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H
Sbjct: 244 LVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCH 303
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPIITPAYPCMNSSYNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFE
Sbjct: 304 HMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNK--TSWPALFEPFQFFE 361
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
AYKNYL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+
Sbjct: 362 AYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 421
Query: 422 -YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 480
+C++FMGL RK+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P
Sbjct: 422 AHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPA 481
Query: 481 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 540
+VFP G + RPS+ + ++ + T + D + +++ D +R AK +T
Sbjct: 482 YVFPEGYKRPRPSRHV--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSST 539
Query: 541 MP 542
P
Sbjct: 540 SP 541
>gi|413943851|gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943852|gb|AFW76501.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 702
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/542 (62%), Positives = 425/542 (78%), Gaps = 5/542 (0%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
GS ++ GIT+P+SL GP + DL RT +LEK+L + LYES +E+ REEVLG+LDQIV
Sbjct: 4 GSDAPKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIV 63
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+++ +G DQ+++EANA +FTFGSYRLGVHGPGADIDTLCVGP + REEDFF
Sbjct: 64 KDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFI 123
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
LH +L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L
Sbjct: 124 VLHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLY 183
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
+ DE TVRSLNGCRV DQI+RLVP +NFRT LRC+++WAKRRGVYSNV GFLGG+NWAL
Sbjct: 184 DVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWAL 243
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H
Sbjct: 244 LVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCH 303
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPIITPAYPCMNSSYNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFE
Sbjct: 304 HMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKT--SWPALFEPFQFFE 361
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
AYKNYL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+
Sbjct: 362 AYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 421
Query: 422 -YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 480
+C++FMGL RK+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P
Sbjct: 422 AHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPA 481
Query: 481 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 540
+VFP G + RPS+ + ++ + T + D + +++ D +R AK +T
Sbjct: 482 YVFPEGYKRPRPSRHV--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSST 539
Query: 541 MP 542
P
Sbjct: 540 SP 541
>gi|413943853|gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 696
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/542 (62%), Positives = 425/542 (78%), Gaps = 5/542 (0%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
GS ++ GIT+P+SL GP + DL RT +LEK+L + LYES +E+ REEVLG+LDQIV
Sbjct: 4 GSDAPKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIV 63
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+++ +G DQ+++EANA +FTFGSYRLGVHGPGADIDTLCVGP + REEDFF
Sbjct: 64 KDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFI 123
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
LH +L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L
Sbjct: 124 VLHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLY 183
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
+ DE TVRSLNGCRV DQI+RLVP +NFRT LRC+++WAKRRGVYSNV GFLGG+NWAL
Sbjct: 184 DVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWAL 243
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H
Sbjct: 244 LVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCH 303
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPIITPAYPCMNSSYNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFE
Sbjct: 304 HMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNK--TSWPALFEPFQFFE 361
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
AYKNYL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+
Sbjct: 362 AYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 421
Query: 422 -YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 480
+C++FMGL RK+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P
Sbjct: 422 AHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPA 481
Query: 481 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 540
+VFP G + RPS+ + ++ + T + D + +++ D +R AK +T
Sbjct: 482 YVFPEGYKRPRPSRHV--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSST 539
Query: 541 MP 542
P
Sbjct: 540 SP 541
>gi|297743180|emb|CBI36047.3| unnamed protein product [Vitis vinifera]
Length = 677
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/489 (67%), Positives = 405/489 (82%), Gaps = 3/489 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ G+T+PIS+AGPT+ D+ R+ +LEK+L D LYES+EEA+ R EVL RL QIVK WVK
Sbjct: 17 KQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKRAEVLDRLGQIVKDWVK 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+++R +G DQ++++ANA +FTFGSYRLGVHGPG DIDTLC+GP + +REEDFF LH +
Sbjct: 77 QLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNI 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L +M EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L N DE
Sbjct: 137 LADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEP 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRSLNGCRV DQIL+LVP +++F TTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 197 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAVPSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPII
Sbjct: 257 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYPCMNSSYNVS STLR+MM++FQ G++ICE +E + A W LFEP+ FFE+YKNY
Sbjct: 317 TPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNA--QWGALFEPYLFFESYKNY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 425
L++DI A + DDLR WKGWVESRLRQLTL IER T+ LQCHP+P ++ D SK +C++
Sbjct: 375 LQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAF 434
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
FMGLQRKQG + EG+QFDIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP
Sbjct: 435 FMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPE 494
Query: 486 GVRPSRPSK 494
G + SRP +
Sbjct: 495 GYKRSRPQR 503
>gi|357124126|ref|XP_003563757.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 700
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/587 (59%), Positives = 439/587 (74%), Gaps = 18/587 (3%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAK 72
+P+SLAGP D D+ RT +L K+L + LYES E+ REEVLG LD+IVK WVK+++ +
Sbjct: 6 KPLSLAGPVDADIQRTAELNKFLVEAGLYESAHESARREEVLGELDKIVKDWVKQLTSQR 65
Query: 73 GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 132
G DQ++++ANA +FTFGSYRLGVHGPGAD+DTLCVGP + REEDFF LH +L + E
Sbjct: 66 GYTDQMVEDANAVLFTFGSYRLGVHGPGADVDTLCVGPSYVNREEDFFIVLHDILAQTEE 125
Query: 133 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 192
VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ+S+L + DE TVRSLN
Sbjct: 126 VTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQESVLYDIDEATVRSLN 185
Query: 193 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 252
GCRV DQILRLVP I+NFRTTLRC++ WAKRRGVYSNV GFLGG+NWALLVAR+CQLYPN
Sbjct: 186 GCRVADQILRLVPNIENFRTTLRCLKHWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 245
Query: 253 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 312
AVPSMLVSRFFRV+TQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPIITPAYPC
Sbjct: 246 AVPSMLVSRFFRVFTQWRWPNPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPC 305
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 372
MNSSYNVSTSTLR+M+++FQ G++IC+ +E N+A +W LFE F FFEAYKNYL++DI
Sbjct: 306 MNSSYNVSTSTLRVMIEQFQFGNKICQEIELNKA--NWPALFESFQFFEAYKNYLQVDII 363
Query: 373 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQR 431
AE+ +DLR WKGWVESRLRQLTLKIER TY LQCHP+P +++D S+ +C++FMGL R
Sbjct: 364 AEDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSR 423
Query: 432 KQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 491
GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G R R
Sbjct: 424 NVGVKIEEGQQFDIRGTVDEFRHDINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYRRPR 483
Query: 492 PSKGTWDSRRALERKVSSHTKPGADDGR-KRKQTDDNVDTHLRNAKCHATMPSSSGEFRE 550
P + +++ + + G+ DG+ KRK D C + +S
Sbjct: 484 PQRHVSHQQQSDKNDTENGNMTGSPDGQLKRKHDSAGTDD---TEPCRSVKRASRASVSP 540
Query: 551 GSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
P S+ SS +I ++E +N++K+ +N + GS+NS
Sbjct: 541 VHPTTSSPSSGNI--------SDEATCNNQKKMSSNASG---GSQNS 576
>gi|53792977|dbj|BAD54151.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
Length = 740
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/520 (63%), Positives = 419/520 (80%), Gaps = 3/520 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GIT+PISLA P + DL +T +LEK+L + LYES EE+ REEVLG LD+IVK WVK
Sbjct: 18 KQYGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVK 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+++ +G DQ+++EANA +FTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +
Sbjct: 78 QLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDI 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 138 LAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEV 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+
Sbjct: 198 TVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARV 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPII
Sbjct: 258 CQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKNY
Sbjct: 318 TPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKNY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 425
L++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++
Sbjct: 376 LQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAF 435
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP
Sbjct: 436 FMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPE 495
Query: 486 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 525
G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 496 GYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 535
>gi|58220767|gb|AAW68015.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 708
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/520 (63%), Positives = 419/520 (80%), Gaps = 3/520 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GIT+PISLA P + DL +T +LEK+L + LYES EE+ REEVLG LD+IVK WVK
Sbjct: 18 KQFGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVK 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+++ +G DQ+++EANA +FTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +
Sbjct: 78 QLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDI 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 138 LAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEV 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+
Sbjct: 198 TVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARV 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPII
Sbjct: 258 CQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKNY
Sbjct: 318 TPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKNY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 425
L++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++
Sbjct: 376 LQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAF 435
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP
Sbjct: 436 FMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPE 495
Query: 486 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 525
G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 496 GYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 535
>gi|356507941|ref|XP_003522721.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 651
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/625 (57%), Positives = 444/625 (71%), Gaps = 38/625 (6%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
+ T+P+SLAGPTD DL R +L+K+L D LYES EE+ +R+EVL RLDQIVK WVK+
Sbjct: 22 KYAFTKPLSLAGPTDADLQRNNELDKFLLDSGLYESNEESAARKEVLHRLDQIVKNWVKQ 81
Query: 68 ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
++R +G DQ++++ANA IFTFGSYRLGVHGPG DIDTLC+GP + REEDFF LH +L
Sbjct: 82 LTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREEDFFVILHNIL 141
Query: 128 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 187
EM EV+EL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L + DE T
Sbjct: 142 AEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPT 201
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
VRSLNGCRV DQIL+LVP +++FRT LRC++FWAKRRGVYSNV GFLGG+NWA+LVARIC
Sbjct: 202 VRSLNGCRVADQILKLVPNVEHFRTALRCLKFWAKRRGVYSNVTGFLGGVNWAILVARIC 261
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 307
QLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG +WDPRRNP+D++H MPIIT
Sbjct: 262 QLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIIT 321
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
PAYPCMNSSYNVS STLR+MM++F+ G++IC+ +E N+A W LF+P+ FFEAYKNYL
Sbjct: 322 PAYPCMNSSYNVSASTLRVMMEQFRYGNKICDEIELNKA--QWSALFQPYIFFEAYKNYL 379
Query: 368 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYF 426
++DI A +ADDL W+GWVESRLR LTLKIER T MLQCHP+P ++ D SK + ++F
Sbjct: 380 QVDIIASDADDLLAWRGWVESRLRLLTLKIERDTNGMLQCHPYPNEYVDTSKLCAHSAFF 439
Query: 427 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGG 486
MGLQRK+GV EG+QFDIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFPGG
Sbjct: 440 MGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFPGG 499
Query: 487 VRPSRPSKGTWDSRRALERKVSSHTKPGADDGR---------------KRKQTDDNVDTH 531
+ +R + R +S + DD KRK + VD
Sbjct: 500 YKRTR-----------MPRHISHQAEKTGDDATKCYSGSGSGSSERCIKRKSCPEMVDKK 548
Query: 532 LRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNL---- 587
A++ E S S + + E ++ LAGS + +N
Sbjct: 549 PGKPDKRASISPQRLECVSPESCTSK-SGGTTQMSIECIEVVRLAGSTTKDANDNCEVKS 607
Query: 588 TDSIRGSRNSVEVS----SHNGKVD 608
+D++ GS S EV+ S G VD
Sbjct: 608 SDALPGSGLSTEVADMQISEPGFVD 632
>gi|297724965|ref|NP_001174846.1| Os06g0558700 [Oryza sativa Japonica Group]
gi|255677141|dbj|BAH93574.1| Os06g0558700 [Oryza sativa Japonica Group]
Length = 708
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/520 (63%), Positives = 419/520 (80%), Gaps = 3/520 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GIT+PISLA P + DL +T +LEK+L + LYES EE+ REEVLG LD+IVK WVK
Sbjct: 18 KQYGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVK 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+++ +G DQ+++EANA +FTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +
Sbjct: 78 QLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDI 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 138 LAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEV 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+
Sbjct: 198 TVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARV 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPII
Sbjct: 258 CQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKNY
Sbjct: 318 TPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKNY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 425
L++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++
Sbjct: 376 LQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAF 435
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP
Sbjct: 436 FMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPE 495
Query: 486 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 525
G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 496 GYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 535
>gi|449515462|ref|XP_004164768.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 544
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/486 (68%), Positives = 403/486 (82%), Gaps = 4/486 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T+PISLAGP D D+ R +LEK+L D LYES+EEA REEVLGR+DQIVK WVK+++
Sbjct: 21 GVTKPISLAGPMDADIHRNIELEKFLVDSELYESKEEAAKREEVLGRIDQIVKSWVKQLT 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+G +Q++++ANA FTFGSYRLGVHGPG+DIDTLCVGP + RE DFF LH +L E
Sbjct: 81 LLRGYTEQMVEDANAVXFTFGSYRLGVHGPGSDIDTLCVGPSYVNRE-DFFIILHNILAE 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVT+L PVPDAHVPVM+FKF G+SIDLLYA +SL V+PEDLDIS S+L N DEQTVR
Sbjct: 140 MEEVTDLQPVPDAHVPVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVDEQTVR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQILRLVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVA++CQL
Sbjct: 200 SLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAQVCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG VWDPRRNP+D++HLMPIITPA
Sbjct: 260 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVSTSTLR+MM++F+ G+ ICE ++ ++A W LFEP+ FFE YKNYL++
Sbjct: 320 YPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKA--QWSALFEPYLFFETYKNYLQV 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 428
DI A +ADDL WKGWVESR RQLTLKIER T MLQCHP+P ++SD SKP +C++FMG
Sbjct: 378 DIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMG 437
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQRK+G+ G+QFDIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFP G +
Sbjct: 438 LQRKEGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHK 497
Query: 489 PSRPSK 494
++P +
Sbjct: 498 RAKPLR 503
>gi|326505742|dbj|BAJ95542.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 694
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/572 (59%), Positives = 427/572 (74%), Gaps = 17/572 (2%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAK 72
+PISLAGP D D+ RT +L K+L + LYES +E+ REEVLG LD+IVK+WVK+++ +
Sbjct: 6 KPISLAGPLDADVQRTAELNKFLVEAGLYESADESARREEVLGELDKIVKVWVKQLTSQR 65
Query: 73 GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 132
G DQ+++EANA +FTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L + E
Sbjct: 66 GYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEE 125
Query: 133 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 192
V++L PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ+++L + DE TVRSL
Sbjct: 126 VSQLQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQEAVLYDIDEATVRSLT 185
Query: 193 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 252
GCRV DQILRLVP I++FRTTLRC++ WA+RRGVYSNV GFLGG+NWALLVAR+CQLYPN
Sbjct: 186 GCRVADQILRLVPNIESFRTTLRCLKHWARRRGVYSNVTGFLGGVNWALLVARVCQLYPN 245
Query: 253 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 312
AVPSMLVSRFFRV+TQWRWP PV+LCAIEE LG VWDPR+NP+D+ H MPIITPAYPC
Sbjct: 246 AVPSMLVSRFFRVFTQWRWPTPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPC 305
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 372
MNSSYNVSTSTLR+M+++FQ G++IC+ +E N+A W LFEPF FFEAYKNYL++DI
Sbjct: 306 MNSSYNVSTSTLRVMIEQFQFGNKICQEIEMNKA--SWSALFEPFNFFEAYKNYLQVDII 363
Query: 373 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQR 431
AE+ +DLR WKGWVESRLRQLTLKIER TY LQCHP+P +++D S+ +C++FMGL R
Sbjct: 364 AEDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSR 423
Query: 432 KQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 491
K+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G + R
Sbjct: 424 KEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYKRPR 483
Query: 492 PSKGTWDSRRALERKVSSHTKPG---ADDGRKRKQTDDNVDTHLRNAKCHATMPS--SSG 546
P R + S PG D KRK +D C + + S G
Sbjct: 484 P------QRHVNHQHQSDKNDPGNGSPDSQLKRKHDSTGIDD---TEPCQSVKRASISPG 534
Query: 547 EFREGSPIMSTISSSSINLQFEHMDANELAGS 578
+ SP +S I+ + + +N GS
Sbjct: 535 HPKTSSPRSGNVSDEPISNSQQKVTSNASGGS 566
>gi|297802710|ref|XP_002869239.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
gi|297315075|gb|EFH45498.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 748
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/592 (59%), Positives = 433/592 (73%), Gaps = 8/592 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQIVK WVK+++
Sbjct: 21 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ +G DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 81 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 140
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L + DE TVR
Sbjct: 141 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCDVDEPTVR 200
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 201 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 260
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPR+N +D+YHLMPIITPA
Sbjct: 261 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRKNHRDRYHLMPIITPA 320
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 321 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 378
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 428
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 379 DIVAGDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 438
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 439 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 498
Query: 489 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 547
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 499 RPRQSRHQNQPGGKSGEDGTVSHSGSVVERHAKRKNDSEMMDARPEKPEKRASLSPQSLD 558
Query: 548 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
E S I + + NL+ + E N E E LT+ R NS
Sbjct: 559 IVSPESSAITTGWTPPVCNLRRPPSEEIEAENLNTECTE--LTNFARNECNS 608
>gi|147790301|emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/489 (66%), Positives = 399/489 (81%), Gaps = 12/489 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ G+T+PIS+AGPT+ D+ R+ +LEK S+EEA+ R EVL RL QIVK WVK
Sbjct: 17 KQYGVTKPISVAGPTEVDIQRSLELEK---------SKEEAIKRAEVLDRLGQIVKDWVK 67
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+++R +G DQ++++ANA +FTFGSYRLGVHGPG DIDTLC+GP + +REEDFF LH +
Sbjct: 68 QLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNI 127
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L +M EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L N DE
Sbjct: 128 LADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEP 187
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRSLNGCRV DQIL+LVP +++F TTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 188 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 247
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAVPSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPII
Sbjct: 248 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPII 307
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYPCMNSSYNVS STLR+MM++FQ G++ICE +E + A W LFEP+ FFE+YKNY
Sbjct: 308 TPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNA--QWGALFEPYLFFESYKNY 365
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 425
L++DI A + DDLR WKGWVESRLRQLTL IER T+ LQCHP+P ++ D SK +C++
Sbjct: 366 LQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAF 425
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
FMGLQRKQG + EG+QFDIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP
Sbjct: 426 FMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPE 485
Query: 486 GVRPSRPSK 494
G + SRP +
Sbjct: 486 GYKRSRPQR 494
>gi|42573145|ref|NP_974669.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|186515704|ref|NP_001119102.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|222422953|dbj|BAH19461.1| AT4G32850 [Arabidopsis thaliana]
gi|332660729|gb|AEE86129.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660734|gb|AEE86134.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/592 (59%), Positives = 431/592 (72%), Gaps = 8/592 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQIVK WVK+++
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ +G DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 428
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 489 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 547
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 548 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|30689510|ref|NP_849561.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60 [Arabidopsis thaliana]
gi|23308169|gb|AAN18054.1| At4g32850/T16I18_60 [Arabidopsis thaliana]
gi|332660730|gb|AEE86130.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 741
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/592 (59%), Positives = 431/592 (72%), Gaps = 8/592 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQIVK WVK+++
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ +G DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 428
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 489 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 547
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 548 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|42567333|ref|NP_195011.4| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660727|gb|AEE86127.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 735
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/592 (59%), Positives = 431/592 (72%), Gaps = 8/592 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQIVK WVK+++
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ +G DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 428
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 489 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 547
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 548 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|32527646|gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 737
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/592 (59%), Positives = 431/592 (72%), Gaps = 8/592 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQIVK WVK+++
Sbjct: 21 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ +G DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 81 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 140
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 141 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 200
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 201 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 260
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 261 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 320
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 321 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 378
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 428
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 379 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 438
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 439 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 498
Query: 489 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 547
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 499 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 558
Query: 548 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
E S I + + NL+ + E N E E LTD R NS
Sbjct: 559 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 608
>gi|186515708|ref|NP_001119103.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|227202692|dbj|BAH56819.1| AT4G32850 [Arabidopsis thaliana]
gi|332660735|gb|AEE86135.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/592 (59%), Positives = 431/592 (72%), Gaps = 8/592 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQIVK WVK+++
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ +G DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 428
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 489 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 547
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 548 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|7270232|emb|CAB80002.1| putative poly(A) polymerase [Arabidopsis thaliana]
Length = 729
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/592 (59%), Positives = 431/592 (72%), Gaps = 8/592 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQIVK WVK+++
Sbjct: 21 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ +G DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 81 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 140
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 141 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 200
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 201 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 260
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 261 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 320
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 321 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 378
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 428
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 379 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 438
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 439 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 498
Query: 489 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 547
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 499 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 558
Query: 548 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
E S I + + NL+ + E N E E LTD R NS
Sbjct: 559 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 608
>gi|42570181|ref|NP_849562.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|79610218|ref|NP_974670.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660726|gb|AEE86126.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660728|gb|AEE86128.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 738
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/592 (59%), Positives = 431/592 (72%), Gaps = 8/592 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQIVK WVK+++
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ +G DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 428
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 489 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 547
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 548 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|79326212|ref|NP_001031779.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660733|gb|AEE86133.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 765
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/592 (59%), Positives = 431/592 (72%), Gaps = 8/592 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQIVK WVK+++
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ +G DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 428
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 489 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 547
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 548 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|42573143|ref|NP_974668.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660731|gb|AEE86131.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 730
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/592 (59%), Positives = 431/592 (72%), Gaps = 8/592 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQIVK WVK+++
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ +G DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 428
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 489 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 547
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 548 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|79326203|ref|NP_001031778.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660732|gb|AEE86132.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 716
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/592 (59%), Positives = 431/592 (72%), Gaps = 8/592 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQIVK WVK+++
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ +G DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 428
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 489 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 547
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 548 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|449448062|ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 772
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/528 (63%), Positives = 402/528 (76%), Gaps = 17/528 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T+PIS+AGP D D+ R ++LEK+L D LYES+EE+ REEVL R+ QIVK WVK+++
Sbjct: 27 GVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRIGQIVKDWVKQLT 86
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
R KG DQ++++ANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 87 RIKGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFYMLHNILEE 146
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EV+EL PVPDAHVPVMKFKF G+SIDLLYA +S V+PEDLDIS S+L N DE TVR
Sbjct: 147 MEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVSVLYNVDEPTVR 206
Query: 190 SLNGCRVTDQILRLVPKIQNFRT--------------TLRCMRFWAKRRGVYSNVAGFLG 235
SLNGCRV DQIL+LVP + LRC++FWAKRRGVYSNV GFLG
Sbjct: 207 SLNGCRVADQILKLVPFFFFVKFFHPNIPVWKLXSPFALRCLKFWAKRRGVYSNVTGFLG 266
Query: 236 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN 295
G+NWALLVAR+CQLYPNAVPSML+SRFFRVYT WRWPNPV+LCAIEE LG VWDPR+N
Sbjct: 267 GVNWALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKN 326
Query: 296 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 355
P+D+ H MPIITPAYPCMNSSYNVSTSTLR+MM++FQ G+++CE +E N+A W +LFE
Sbjct: 327 PRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKA--QWSSLFE 384
Query: 356 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
P+ FFE+YKNYL++DI A +ADDLR+WKGWVESR R LTL IER T LQCHP+P ++
Sbjct: 385 PYLFFESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYV 444
Query: 416 DKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 474
D SKP +C++FMGLQRKQG + EG+QFDIR +V EFK S Y KPGM+I V+HV
Sbjct: 445 DTSKPCAHCAFFMGLQRKQGEIIQEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVR 504
Query: 475 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRK 522
RR +P FVFP G + R S+ + R + V + + KRK
Sbjct: 505 RRQIPPFVFPEGHKRFRASRLSALQRSPNQEDVQNGRSGSCERDLKRK 552
>gi|334184470|ref|NP_001189603.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252670|gb|AEC07764.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 797
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/559 (59%), Positives = 413/559 (73%), Gaps = 12/559 (2%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GITEP+S+AGP+ D+ R +LEK+L D LYES+EE + REEV+ R+DQIVK WVK+++
Sbjct: 24 GITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLT 83
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
R +G DQ++++ANA IFTFGSYRLGVHGP ADIDTLCVGP + REEDFF +L E
Sbjct: 84 RQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAE 143
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVR
Sbjct: 144 MEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVR 203
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ
Sbjct: 204 SLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQF 263
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPA
Sbjct: 264 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPA 323
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++
Sbjct: 324 YPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKNYLQV 381
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 428
D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C++FMG
Sbjct: 382 DVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMG 441
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G +
Sbjct: 442 LQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYK 501
Query: 489 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKCH-----A 539
SR S+ R + + KRK D+ +++ + A C A
Sbjct: 502 RSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDA 561
Query: 540 TMPSSSGEFREGSPIMSTI 558
P SSG G+P + +
Sbjct: 562 ASPDSSGITTSGTPQIGIV 580
>gi|30682917|ref|NP_850071.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252668|gb|AEC07762.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 787
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/559 (59%), Positives = 413/559 (73%), Gaps = 12/559 (2%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GITEP+S+AGP+ D+ R +LEK+L D LYES+EE + REEV+ R+DQIVK WVK+++
Sbjct: 24 GITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLT 83
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
R +G DQ++++ANA IFTFGSYRLGVHGP ADIDTLCVGP + REEDFF +L E
Sbjct: 84 RQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAE 143
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVR
Sbjct: 144 MEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVR 203
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ
Sbjct: 204 SLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQF 263
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPA
Sbjct: 264 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPA 323
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++
Sbjct: 324 YPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKNYLQV 381
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 428
D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C++FMG
Sbjct: 382 DVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMG 441
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G +
Sbjct: 442 LQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYK 501
Query: 489 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKCH-----A 539
SR S+ R + + KRK D+ +++ + A C A
Sbjct: 502 RSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDA 561
Query: 540 TMPSSSGEFREGSPIMSTI 558
P SSG G+P + +
Sbjct: 562 ASPDSSGITTSGTPQIGIV 580
>gi|79323064|ref|NP_001031417.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252669|gb|AEC07763.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 786
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/559 (59%), Positives = 413/559 (73%), Gaps = 12/559 (2%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GITEP+S+AGP+ D+ R +LEK+L D LYES+EE + REEV+ R+DQIVK WVK+++
Sbjct: 24 GITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLT 83
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
R +G DQ++++ANA IFTFGSYRLGVHGP ADIDTLCVGP + REEDFF +L E
Sbjct: 84 RQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAE 143
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVR
Sbjct: 144 MEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVR 203
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ
Sbjct: 204 SLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQF 263
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPA
Sbjct: 264 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPA 323
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++
Sbjct: 324 YPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKNYLQV 381
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 428
D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C++FMG
Sbjct: 382 DVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMG 441
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G +
Sbjct: 442 LQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYK 501
Query: 489 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKCH-----A 539
SR S+ R + + KRK D+ +++ + A C A
Sbjct: 502 RSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDA 561
Query: 540 TMPSSSGEFREGSPIMSTI 558
P SSG G+P + +
Sbjct: 562 ASPDSSGITTSGTPQIGIV 580
>gi|18400958|ref|NP_565611.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|31747891|gb|AAF66438.2|AF255297_1 nuclear poly(A) polymerase [Arabidopsis thaliana]
gi|14532700|gb|AAK64151.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|18491197|gb|AAL69501.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|20197361|gb|AAC42245.2| putative poly(A) polymerase [Arabidopsis thaliana]
gi|330252667|gb|AEC07761.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 800
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/559 (59%), Positives = 413/559 (73%), Gaps = 12/559 (2%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GITEP+S+AGP+ D+ R +LEK+L D LYES+EE + REEV+ R+DQIVK WVK+++
Sbjct: 24 GITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLT 83
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
R +G DQ++++ANA IFTFGSYRLGVHGP ADIDTLCVGP + REEDFF +L E
Sbjct: 84 RQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAE 143
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVR
Sbjct: 144 MEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVR 203
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ
Sbjct: 204 SLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQF 263
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPA
Sbjct: 264 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPA 323
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++
Sbjct: 324 YPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKNYLQV 381
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 428
D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C++FMG
Sbjct: 382 DVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMG 441
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G +
Sbjct: 442 LQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYK 501
Query: 489 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKCH-----A 539
SR S+ R + + KRK D+ +++ + A C A
Sbjct: 502 RSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDA 561
Query: 540 TMPSSSGEFREGSPIMSTI 558
P SSG G+P + +
Sbjct: 562 ASPDSSGITTSGTPQIGIV 580
>gi|297825665|ref|XP_002880715.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326554|gb|EFH56974.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 788
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/552 (61%), Positives = 408/552 (73%), Gaps = 5/552 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT+P+S+AGP D+ R +LEK+L D LYES+EE + REEVL R+DQIVK WVK+++
Sbjct: 25 GITKPLSIAGPCAADVKRNLELEKFLVDEGLYESKEETMRREEVLVRIDQIVKHWVKQLT 84
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
R +G DQ++ +ANA IFTFGSYRLGVHGP ADIDTLCVGP + REEDFF L ML E
Sbjct: 85 RQRGYTDQMVDDANAVIFTFGSYRLGVHGPRADIDTLCVGPSYVNREEDFFIILRDMLAE 144
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVR
Sbjct: 145 MEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVR 204
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 205 SLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQL 264
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+PSMLVSRFFRVY QWRWPNPV+LC IEE L VWDPR+N +D+YHLMPIITPA
Sbjct: 265 YPNAIPSMLVSRFFRVYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHRDRYHLMPIITPA 324
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LFE + FFEAYKNYL++
Sbjct: 325 YPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--QWSSLFEQYMFFEAYKNYLQV 382
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 428
D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C++FMG
Sbjct: 383 DVLALDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKKFRHCAFFMG 442
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
LQR +G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G +
Sbjct: 443 LQRAEGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVYVSHVRRRQLPSFVFPKGYK 502
Query: 489 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEF 548
R S+ R V D KRK ++ +DT R K S
Sbjct: 503 RPRQSRHQNQQCREPGEGVVGSLSDSVDGYAKRKNDNETMDT--RPEKREKRASRSPHSL 560
Query: 549 REGSPIMSTISS 560
SP+ S I++
Sbjct: 561 DAVSPVSSGITT 572
>gi|356522230|ref|XP_003529750.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 766
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/615 (57%), Positives = 448/615 (72%), Gaps = 22/615 (3%)
Query: 1 MGSSNG-----QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLG 55
MG S G ++ G+T+PIS+AGP+ DL RTR+LEK+L LYES++EA REEVL
Sbjct: 1 MGGSEGVGASSKQFGVTKPISMAGPSATDLQRTRELEKFLAASGLYESKDEAAKREEVLH 60
Query: 56 RLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR 115
RL +IVK WVK+++R +G Q++++ANA I TFGSYRLGVHGPGAD+DTLC+GP + TR
Sbjct: 61 RLGEIVKSWVKQLTRLRGYTGQMVEDANAIILTFGSYRLGVHGPGADLDTLCIGPSYVTR 120
Query: 116 EEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS 175
EEDFF LH +L + EVTEL P+PDAHVPVMKFKF G+SIDLLYA +S V+PEDLDIS
Sbjct: 121 EEDFFYTLHDILANVEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLVLPEDLDIS 180
Query: 176 QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 235
S+L N DE TVRSLNGCRV DQIL+LVP I++FRTTLRC++FWAKRRG+YSNV GFLG
Sbjct: 181 DVSVLHNVDEPTVRSLNGCRVADQILKLVPNIEHFRTTLRCLKFWAKRRGIYSNVTGFLG 240
Query: 236 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN 295
G+N ALLVAR+CQ YPNAVPSMLVSRFFRVYTQWRWP PV+LC IEE LG VW P +N
Sbjct: 241 GVNLALLVARVCQFYPNAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKN 300
Query: 296 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 355
P+D+ H MPIITPAYPCMNSSYNVSTSTLR+MMD+FQ G++IC +E + A W LFE
Sbjct: 301 PRDRSHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNKICGEIELSRA--CWKALFE 358
Query: 356 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
++FFE+YKNYL++D+ A +ADDLR+WKGWVESRLRQLTL IER T+ LQCHP+ +F
Sbjct: 359 QYSFFESYKNYLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFV 418
Query: 416 DKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 474
D S+ +C++FMGLQRKQG V EG+QFDIR TV+EF+ +V+MY KPGM+I V+HV
Sbjct: 419 DTSRLCAHCAFFMGLQRKQGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVR 478
Query: 475 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDG----RKRKQTDDNVDT 530
RR +P +V P G + SR S+ T +E S H + + RKRK +D VD
Sbjct: 479 RRQIPFYVVPDGYKRSRLSRPT----SQVENCKSFHNEVSGTEHVERIRKRK-NNDGVDV 533
Query: 531 HLRN-AKCHATMPSSSGEFREGSPIMSTISSSSIN--LQFEHMDANELAGSNREKVENNL 587
K + PS R S +S +++ + +++ N L+ S +++++
Sbjct: 534 RGDAIVKRQSASPSEDRLARHSSLGTGGLSVEAVSDRQELRNVECNHLSNSGQDELDR-- 591
Query: 588 TDSIRGSRNSVEVSS 602
T+S + NS ++S
Sbjct: 592 TESPEAASNSSVITS 606
>gi|413926072|gb|AFW66004.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 680
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/623 (54%), Positives = 439/623 (70%), Gaps = 13/623 (2%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
SS + G P+SLAGPT DL RT +LEK+L + LYE +EE+ RE+VL + IVK
Sbjct: 14 SSPKRYSGTDPPLSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLSEIGLIVK 73
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
WVK+++R KG +QL+++ANA +FTFGSYRLGVHGPGADIDTLCVGP + REEDFF
Sbjct: 74 EWVKQLTRKKGYAEQLVEQANAILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVT 133
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 182
LH +L E EV EL PVPDAHVPV+KFKF G+SIDLLYA +SL VIP D DISQ S+L +
Sbjct: 134 LHGILAEKEEVAELQPVPDAHVPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCD 193
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
DE TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAKRRGVYSN+ GFLGG+NWALL
Sbjct: 194 VDEATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALL 253
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE LG +WDPR+NP+D+ HL
Sbjct: 254 VARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHL 313
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MPIITPAYPCMNSSYNVSTSTLR++M++FQ G+++C+ +E N+A +W+ LFEPF FFEA
Sbjct: 314 MPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKVCQEIELNKA--NWNALFEPFHFFEA 371
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPL 421
Y+ +L +DI AE+ DDLR WKGW+ESRLRQLTLKIER T +LQCHP+P ++SD + +
Sbjct: 372 YRKFLVVDIVAEDDDDLRLWKGWIESRLRQLTLKIERDTKGILQCHPYPCEYSDPTIECA 431
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
+C+++MGL RK+G+ G+QFDIR TV EF + + MY+L KPGM ++V HV R +P++
Sbjct: 432 HCAFYMGLSRKEGLK-KRGQQFDIRGTVDEFMREIGMYSLWKPGMDLAVTHVHREQVPSY 490
Query: 482 VFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD---NVDTHLRNAKCH 538
VF G + P T + + + P + KRK D +VD +
Sbjct: 491 VFEQGYKKPCP---TMHANQQEQSDGDGTFSPYLESQLKRKYISDGDGHVDLCKSVKRAS 547
Query: 539 ATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKV---ENNLTDSIRGSR 595
+ P G+ + + + S + + + A S+ + + + LT S GS
Sbjct: 548 VSPPGVGTPPHLGNSVSNVVCDSPVKFVSSVVCSGAHASSSHDDINIEQAQLTTSPYGSE 607
Query: 596 NSVEVSSHNGKVDGPMIGDPRNK 618
++ + V ++ D +K
Sbjct: 608 DTSASGTSCAAVGAVILADESSK 630
>gi|242061050|ref|XP_002451814.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
gi|241931645|gb|EES04790.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
Length = 672
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/623 (54%), Positives = 439/623 (70%), Gaps = 14/623 (2%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
SS + G P+SLAGPT DL RT +LEK+L + LYE +EE+ RE+VL + QIVK
Sbjct: 14 SSPKRYSGTDPPLSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLCEIGQIVK 73
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
WVK+++ KG DQL+++ANA +FTFGSYRLGVHGP ADIDTLCVGP + REEDFF
Sbjct: 74 EWVKQLTSKKGYADQLVEQANAVLFTFGSYRLGVHGPEADIDTLCVGPSYVNREEDFFVT 133
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 182
LH +L E EVTEL PVPDAHVPV+KFKF G+SIDLLYA LSL VIP D DISQ S+L +
Sbjct: 134 LHGILAEKEEVTELQPVPDAHVPVLKFKFRGISIDLLYASLSLSVIPADFDISQGSVLCD 193
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
DE TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAKRRGVYSN+ GFLGG+NWALL
Sbjct: 194 VDEATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALL 253
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE LG +WDPR+NP+D+ HL
Sbjct: 254 VARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHL 313
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MPIITPAYPCMNSSYNVS+STLR++M++FQ G++IC+ +E N+A +W+ LFEPF FFEA
Sbjct: 314 MPIITPAYPCMNSSYNVSSSTLRVIMEQFQFGNKICQEIELNKA--NWNALFEPFHFFEA 371
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPL 421
Y+ +L +DI AEN DDLR WKGW+ESRLRQLTLKI+R T +LQCHP+P ++SD + +
Sbjct: 372 YRKFLVVDIVAENDDDLRLWKGWIESRLRQLTLKIDRDTKGILQCHPYPCEYSDPTIECA 431
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
+C+++MGL RK+G G+QFDIR TV EF + + MY+L PGM ++V HV R +P++
Sbjct: 432 HCAFYMGLSRKEGSK-KRGQQFDIRGTVDEFMREIGMYSLWMPGMDLAVTHVQREQVPSY 490
Query: 482 VFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD---NVDTHLRNAKCH 538
VF G + P T + + + P D KRK D +V+ H ++ K
Sbjct: 491 VFEQGYKKPCP---TMHANQQEQSDGDVTLSPYLDSQLKRKYDSDGDGHVELH-KSVKWA 546
Query: 539 ATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKV---ENNLTDSIRGSR 595
+ P G G+ + + + S + + + + + + + LT S GS
Sbjct: 547 SVSPPGVGTPPHGNSVSNVVCDSPVKFVSSVVCSRAQTSPSHDDINLEQAQLTTSPYGSE 606
Query: 596 NSVEVSSHNGKVDGPMIGDPRNK 618
++ + V ++ D +K
Sbjct: 607 DTSASGTSFAAVGAVVLADESSK 629
>gi|356528904|ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 790
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/502 (64%), Positives = 400/502 (79%), Gaps = 8/502 (1%)
Query: 1 MGSSNG-----QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLG 55
MG S G ++ G+T+PIS+AGPT DL RTR+LEK+L LYES+EEA REEVL
Sbjct: 1 MGGSEGVGASSKQFGVTKPISMAGPTVTDLQRTRELEKFLAVSGLYESKEEAAKREEVLH 60
Query: 56 RLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR 115
RL +IVK WVK+++R +G DQ++++ANA I TFGSYRLGVHGPGAD+DTLC+GP + R
Sbjct: 61 RLGEIVKNWVKQLTRLRGYTDQMVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNR 120
Query: 116 EEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS 175
EEDFF LH +L + EVTEL P+PDAHVPVMKFKF G+SIDLLYA +S ++PEDLDIS
Sbjct: 121 EEDFFYTLHDILANIEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLIVPEDLDIS 180
Query: 176 QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 235
S+L N DE TVRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRG+YSNV GFLG
Sbjct: 181 DVSVLHNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLG 240
Query: 236 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN 295
G+N ALLVAR+CQ YP AVPSMLVSRFFRVYTQWRWP PV+LC IEE LG VW P +N
Sbjct: 241 GVNLALLVARVCQFYPKAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENDLGFPVWHPGKN 300
Query: 296 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 355
P+D+ H MPIITPAYPCMNSSYNVS STLR+MM++FQ G++IC +E ++ W LFE
Sbjct: 301 PRDRSHHMPIITPAYPCMNSSYNVSMSTLRVMMEQFQYGNKICGEIELSKD--CWKALFE 358
Query: 356 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
++FFE+YKNYL++D+ A +ADDLR+WKGWVESRLRQLTL IER T+ LQCHP+ +F
Sbjct: 359 KYSFFESYKNYLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFV 418
Query: 416 DKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 474
D S+ +C++FMGL RK+G V EG+QFDIR TV+EF+ +V+MY KPGM+I V+HV
Sbjct: 419 DTSRQCAHCAFFMGLHRKEGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVR 478
Query: 475 RRNLPNFVFPGGVRPSRPSKGT 496
RR +P +VFP G + SRPS+ T
Sbjct: 479 RRQIPCYVFPDGYKRSRPSRPT 500
>gi|167998971|ref|XP_001752191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696586|gb|EDQ82924.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/489 (67%), Positives = 396/489 (80%), Gaps = 4/489 (0%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+TEPIS A PT+ D + T++LE+ ++ + L S+EE V REEVLGRLD++V +WVK +
Sbjct: 7 LGVTEPISTADPTEVDYVNTKQLEECVKGLALQGSREEEVRREEVLGRLDELVNVWVKSM 66
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
SR KGLND+ ++EA KIFTFGSYRLGVHGPGADIDTLCVGP + TREEDFF ELH +L
Sbjct: 67 SRKKGLNDEYVREARCKIFTFGSYRLGVHGPGADIDTLCVGPCYVTREEDFFVELHDLLQ 126
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+ VTELH VPDAHVPVM F+F+G+ IDLLYARL LWVIPE+LDI QD+ILQN DEQ+V
Sbjct: 127 KTEGVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQDTILQNVDEQSV 186
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRVTD+ILRLVP +++FRTTLR ++ WAKRRGVYSNV GFLGG+NWALLVARICQ
Sbjct: 187 RSLNGCRVTDRILRLVPNMEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWALLVARICQ 246
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNAVPS+L+SRFFRVY QWRWPNPV+LCAIEEG LGL VWDPRRNP+D+ HLMPIITP
Sbjct: 247 LYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGPLGLPVWDPRRNPRDRSHLMPIITP 306
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
YPC NSS+NVS STLR+M +EF+RG IC++++ A DW LFEP+ FFE+YKNYL+
Sbjct: 307 TYPCQNSSFNVSNSTLRVMTEEFKRGDSICDSLDSKVA--DWSKLFEPYPFFESYKNYLQ 364
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFM 427
IDISA + +DLR WKGWVESRLRQL LK+E+ T+ LQCHPHP F D SK + CS+F+
Sbjct: 365 IDISAGDEEDLRIWKGWVESRLRQLILKVEKDTFGALQCHPHPSAFHDTSKRVQVCSFFV 424
Query: 428 GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGV 487
LQRKQG P FD+ T+ EFK +V+ Y L KP M+I V+HV + +P +VFP G+
Sbjct: 425 ALQRKQGAP-PSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIHVSHVRPKQIPTYVFPNGI 483
Query: 488 RPSRPSKGT 496
RP RP + T
Sbjct: 484 RPVRPPRPT 492
>gi|168067163|ref|XP_001785494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662901|gb|EDQ49701.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/494 (65%), Positives = 399/494 (80%), Gaps = 5/494 (1%)
Query: 3 SSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
+ +G R LG+TEPIS A PT+ D T++LE++++ + L S+EE V REEVLG LD++V
Sbjct: 4 AMDGDRYLGVTEPISTADPTEVDYANTKQLEEFVKGLALQGSREEEVRREEVLGLLDELV 63
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
+WVK +SR KGLND+ ++EA KIFTFGSYRLGVHGPGADIDTLCVGP + TREEDFF
Sbjct: 64 NVWVKMVSRMKGLNDEYVREARCKIFTFGSYRLGVHGPGADIDTLCVGPCYVTREEDFFV 123
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
ELH +L + VTELH VPDAHVPVM F+F+G+ IDLLYARL LWVIPE+LDI QDSILQ
Sbjct: 124 ELHDLLQKTDGVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQDSILQ 183
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N DEQ+VRSLNGCRVTD+ILRLVP I++FRTTLR ++ WAKRRGVYSNV GFLGG+NWAL
Sbjct: 184 NVDEQSVRSLNGCRVTDRILRLVPNIEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWAL 243
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVARICQLYPNAVPS+L+SRFFRVY QWRWPNPV+LCAIEEGSLGL +WDPR+NP+D+ H
Sbjct: 244 LVARICQLYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGSLGLPIWDPRKNPRDRSH 303
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITP YPC NSS+NVS STLR+M +EF+RG +C++++ A DW LFEP+ FFE
Sbjct: 304 LMPIITPTYPCQNSSFNVSNSTLRVMTEEFKRGDGVCDSLDSKVA--DWSKLFEPYPFFE 361
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
+YKNYL+I+I+A + +DLR WKGWVESRLRQL LK+E+ T+ MLQCHPHP F D SK +
Sbjct: 362 SYKNYLQIEITAGDEEDLRIWKGWVESRLRQLILKVEKDTFGMLQCHPHPNAFHDTSKKV 421
Query: 422 -YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 480
CS+F+ LQRKQG FD+ T+ EFK +V+ Y L KP M+I V+HV + +P
Sbjct: 422 QVCSFFVALQRKQGAQ-HSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIGVSHVRPKQIPT 480
Query: 481 FVFPGGVRPSRPSK 494
+VFP G+RP RP +
Sbjct: 481 YVFPNGIRPVRPPR 494
>gi|42571529|ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|332191537|gb|AEE29658.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 586
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/612 (59%), Positives = 423/612 (69%), Gaps = 81/612 (13%)
Query: 126 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 185
ML+EMPEVTELHPVPDAHVP+M FK +GVSIDLLYA+L LWVIPEDLD+SQDSILQNADE
Sbjct: 1 MLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADE 60
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
QTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVAR
Sbjct: 61 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 120
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 305
ICQLYPNA+P++LVSRFFRV+ QW WPN + LC+ +EGSLGLQVWDPR NPKD+ H+MPI
Sbjct: 121 ICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPI 180
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
ITPAYPCMNSSYNVS STLRIM EFQRG+EICEAME N+A DWDTLFEPF FFEAYKN
Sbjct: 181 ITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKA--DWDTLFEPFAFFEAYKN 238
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 425
YL+IDISA N DDLR WKGWVESRLRQLTLKIERH + ML CHPHP DF D S+PL+CSY
Sbjct: 239 YLQIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPLHCSY 297
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
FMGLQRKQGVP EGEQFDIR TV+EFK V+ YTL PGM+ISV H+ RR+LPNFVFPG
Sbjct: 298 FMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPG 357
Query: 486 GVRPSRPSKGTWDSRRALERK----------------VSSHTKPGAD---DGRKRKQTDD 526
GVRPS SKGTWDS R E + +SS +K G++ DG+KRK D
Sbjct: 358 GVRPSHTSKGTWDSNRRSEHRNSSTSSAPAATTTTTEMSSESKAGSNSPVDGKKRKWGDS 417
Query: 527 NVDT-HLRNAKCHA-TMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVE 584
T RN+K A ++P + E +P + +I SS +
Sbjct: 418 ETLTDQPRNSKHIAVSVPVENCEGGSPNPSVGSICSSPM--------------------- 456
Query: 585 NNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKD-AEKLAIEKIMSGPY 643
+ NGK + P+ DP ++F SKD E L IEKI +
Sbjct: 457 --------------KDYCTNGKSE-PISKDPPENVVAF----SKDPPESLPIEKIAT--- 494
Query: 644 VADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSAL 703
QA E ++LE+ + NQ + + ++A AT+ S+ S
Sbjct: 495 --PQAH--ETEELEESFDFGNQVIE--------QISHKVAVLSATATIPPFEATSNGSPF 542
Query: 704 SPNGGLGELEVL 715
P + ELEVL
Sbjct: 543 -PYEAVEELEVL 553
>gi|255549812|ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 712
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/528 (60%), Positives = 390/528 (73%), Gaps = 41/528 (7%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWV 65
++ G+T+PIS AGPT+ D+ RTR+LEK L D LYES++EAV REEVL R+DQ
Sbjct: 14 AKQYGVTKPISTAGPTEADIQRTRELEKLLGDSGLYESKDEAVKREEVLARIDQ------ 67
Query: 66 KKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
VHGPGADIDTLCVGP + REEDFF LH
Sbjct: 68 ------------------------------VHGPGADIDTLCVGPSYVNREEDFFFVLHN 97
Query: 126 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 185
+L EM EVTEL PVPDAHVPVM+FKF G+SIDLLYA +SL V+PEDLDIS S+L + DE
Sbjct: 98 ILAEMEEVTELQPVPDAHVPVMRFKFDGISIDLLYASISLLVVPEDLDISDVSVLYDVDE 157
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
TVRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 158 PTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 217
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 305
ICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC IEE LG +WDPR+NP+D+ H MPI
Sbjct: 218 ICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSIWDPRKNPRDRTHHMPI 277
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
ITPAYPCMNSSYNVSTSTLR+MM++FQ G++ICE +E W TLFEP+ FFE+YKN
Sbjct: 278 ITPAYPCMNSSYNVSTSTLRVMMEQFQYGNKICEEIEL--IKTQWATLFEPYLFFESYKN 335
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 424
YL++DI A + DDLR WKGWVESRLRQLTL I+R TY LQCHP+P ++ D SKP +C+
Sbjct: 336 YLQVDIVATDVDDLRAWKGWVESRLRQLTLMIDRDTYGKLQCHPYPHEYVDTSKPCAHCA 395
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 484
+FMGLQRKQG + EG+QFDIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP
Sbjct: 396 FFMGLQRKQGEMIQEGQQFDIRGTVDEFRNSINMYMFWKPGMEIYVSHVRRKQIPSYVFP 455
Query: 485 GGVRPSRPSKGT--WDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT 530
G R +R + T S + ++ ++ G KRK+ D +D
Sbjct: 456 DGYRRARHPRVTAQQQSDKTCCGDSDAYGNGSSERGHKRKKDSDEIDV 503
>gi|125597568|gb|EAZ37348.1| hypothetical protein OsJ_21686 [Oryza sativa Japonica Group]
Length = 761
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/521 (60%), Positives = 403/521 (77%), Gaps = 7/521 (1%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GIT+PISLA P + DL +T +LEK+L + LYES EE+ REEVLG LD+IVK WVK
Sbjct: 18 KQYGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVK 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+++ +G DQ+++EANA +FTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +
Sbjct: 78 QLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDI 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 138 LAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEV 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLR-CMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
TVRSLNGCRV DQILRLVP +++ + C+ + V GFLGG+NWALLVAR
Sbjct: 198 TVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLVAR 254
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 305
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPI
Sbjct: 255 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPI 314
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
ITPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKN
Sbjct: 315 ITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKN 372
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 424
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C+
Sbjct: 373 YLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 432
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 484
+FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP
Sbjct: 433 FFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFP 492
Query: 485 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 525
G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 493 EGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 533
>gi|125555729|gb|EAZ01335.1| hypothetical protein OsI_23369 [Oryza sativa Indica Group]
Length = 760
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/521 (60%), Positives = 403/521 (77%), Gaps = 7/521 (1%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GIT+PISLA P + DL +T +LEK+L + LYES EE+ REEVLG LD+IVK WVK
Sbjct: 18 KQYGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVK 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+++ +G DQ+++EANA +FTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH +
Sbjct: 78 QLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDI 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 138 LAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEV 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLR-CMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
TVRSLNGCRV DQILRLVP +++ + C+ + V GFLGG+NWALLVAR
Sbjct: 198 TVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLVAR 254
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 305
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPI
Sbjct: 255 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPI 314
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
ITPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKN
Sbjct: 315 ITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKN 372
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 424
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C+
Sbjct: 373 YLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 432
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 484
+FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP
Sbjct: 433 FFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFP 492
Query: 485 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 525
G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 493 EGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 533
>gi|242096166|ref|XP_002438573.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
gi|241916796|gb|EER89940.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
Length = 468
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/440 (69%), Positives = 370/440 (84%), Gaps = 3/440 (0%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
GS ++ GIT+P+SL GP + DL RT +LEK+L + LYES +E+ REEVLG+LDQIV
Sbjct: 4 GSDPPKQYGITKPLSLLGPVEADLQRTAELEKFLVEAGLYESPDESARREEVLGKLDQIV 63
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+++ +G DQ+++EANA +FTFGSYRLGVHGPGADIDTLCVGP + REEDFF
Sbjct: 64 KDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFI 123
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
LH +L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L
Sbjct: 124 VLHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLY 183
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
+ DE TVRSLNGCRV DQI+RLVP I+NFRTTLRC+++WAKRRGVYSNV GFLGG+NWAL
Sbjct: 184 DVDEATVRSLNGCRVADQIIRLVPNIENFRTTLRCLKYWAKRRGVYSNVTGFLGGVNWAL 243
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE +G VWDPR+NP+D+ H
Sbjct: 244 LVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEDEVGFPVWDPRKNPRDRCH 303
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPIITPAYPCMNSSYNVSTSTLR+M+++FQ G++IC+ +E N+A W LFEPF FFE
Sbjct: 304 HMPIITPAYPCMNSSYNVSTSTLRVMVEQFQFGNKICQEIEMNKA--SWSALFEPFQFFE 361
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
AYKNYL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+
Sbjct: 362 AYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 421
Query: 422 -YCSYFMGLQRKQGVPVGEG 440
+C++FMGL RK+GV + EG
Sbjct: 422 AHCAFFMGLSRKEGVKIQEG 441
>gi|125538688|gb|EAY85083.1| hypothetical protein OsI_06439 [Oryza sativa Indica Group]
Length = 683
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/485 (63%), Positives = 388/485 (80%), Gaps = 5/485 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G P+SLA PT DL +T +LEK+L + LYE +EE+ REEVL +DQIVK WVKK++
Sbjct: 23 GADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVT 82
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
KG ++Q+++EANA +FTFGSYRLGVHGPGADID LC+GP + REE+FF L+ L+E
Sbjct: 83 IQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVTLYGALSE 142
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTEL PVPDAHVPVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE TVR
Sbjct: 143 MEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVR 202
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQILRLVP + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+CQL
Sbjct: 203 SLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQL 262
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITP 308
YPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPIITP
Sbjct: 263 YPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITP 322
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYPCMNSSYNVSTSTLR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY YL
Sbjct: 323 AYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTRYLV 380
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFM 427
+DI A++ DDLR WKGW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+++M
Sbjct: 381 VDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYM 440
Query: 428 GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGV 487
GL RK+G+ + G++FDIR TV EF + MYT K GM ++V HV ++ +P +VF G
Sbjct: 441 GLSRKEGMKI-RGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVCKKEIPLYVFEQGC 499
Query: 488 RPSRP 492
+ +RP
Sbjct: 500 QKTRP 504
>gi|49388677|dbj|BAD25861.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
gi|125581374|gb|EAZ22305.1| hypothetical protein OsJ_05959 [Oryza sativa Japonica Group]
Length = 610
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/485 (63%), Positives = 388/485 (80%), Gaps = 5/485 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G P+SLA PT DL +T +LEK+L + LYE +EE+ REEVL +DQIVK WVKK++
Sbjct: 24 GADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVT 83
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
KG ++Q+++EANA +FTFGSYRLGVHGPGADID LC+GP + REE+FF L+ L+E
Sbjct: 84 IQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSE 143
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
M EVTEL PVPDAHVPVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE TVR
Sbjct: 144 MEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVR 203
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRV DQILRLVP + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+CQL
Sbjct: 204 SLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQL 263
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITP 308
YPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPIITP
Sbjct: 264 YPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITP 323
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYPCMNSSYNVSTSTLR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY YL
Sbjct: 324 AYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTRYLV 381
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFM 427
+DI A++ DDLR WKGW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+++M
Sbjct: 382 VDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYM 441
Query: 428 GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGV 487
GL RK+G+ + G++FDIR TV EF + MYT K GM ++V HV ++ +P +VF G
Sbjct: 442 GLSRKEGMKI-RGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGC 500
Query: 488 RPSRP 492
+ +RP
Sbjct: 501 QKTRP 505
>gi|297598868|ref|NP_001046352.2| Os02g0227400 [Oryza sativa Japonica Group]
gi|255670737|dbj|BAF08266.2| Os02g0227400, partial [Oryza sativa Japonica Group]
Length = 602
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/481 (64%), Positives = 387/481 (80%), Gaps = 5/481 (1%)
Query: 14 PISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKG 73
P+SLA PT DL +T +LEK+L + LYE +EE+ REEVL +DQIVK WVKK++ KG
Sbjct: 20 PLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKG 79
Query: 74 LNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 133
++Q+++EANA +FTFGSYRLGVHGPGADID LC+GP + REE+FF L+ L+EM EV
Sbjct: 80 YSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEV 139
Query: 134 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG 193
TEL PVPDAHVPVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE TVRSLNG
Sbjct: 140 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 199
Query: 194 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 253
CRV DQILRLVP + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+CQLYPNA
Sbjct: 200 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 259
Query: 254 VPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 312
VPSMLVSRFFRV+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPIITPAYPC
Sbjct: 260 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 319
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 372
MNSSYNVSTSTLR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY YL +DI
Sbjct: 320 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTRYLVVDIV 377
Query: 373 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFMGLQR 431
A++ DDLR WKGW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+++MGL R
Sbjct: 378 ADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSR 437
Query: 432 KQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 491
K+G+ + G++FDIR TV EF + MYT K GM ++V HV ++ +P +VF G + +R
Sbjct: 438 KEGMKI-RGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTR 496
Query: 492 P 492
P
Sbjct: 497 P 497
>gi|58220773|gb|AAW68018.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 652
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/475 (64%), Positives = 382/475 (80%), Gaps = 5/475 (1%)
Query: 20 PTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLL 79
PT DL +T +LEK+L + LYE +EE+ REEVL +DQIVK WVKK++ KG ++Q++
Sbjct: 2 PTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKGYSEQMV 61
Query: 80 QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPV 139
+EANA +FTFGSYRLGVHGPGADID LC+GP + REE+FF L+ L+EM EVTEL PV
Sbjct: 62 KEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVTLYGALSEMEEVTELQPV 121
Query: 140 PDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 199
PDAHVPVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE TVRSLNGCRV DQ
Sbjct: 122 PDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNGCRVADQ 181
Query: 200 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLV 259
ILRLVP + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+CQLYPNAVPSMLV
Sbjct: 182 ILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNAVPSMLV 241
Query: 260 SRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYN 318
SRFFRV+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPIITPAYPCMNSSYN
Sbjct: 242 SRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNSSYN 301
Query: 319 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD 378
VSTSTLR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY YL +DI A++ DD
Sbjct: 302 VSTSTLRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTRYLVVDIVADDDDD 359
Query: 379 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFMGLQRKQGVPV 437
LR WKGW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+++MGL RK+G+ +
Sbjct: 360 LRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKEGMKI 419
Query: 438 GEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRP 492
G++FDIR TV EF + MYT K GM ++V HV ++ +P +VF G + +RP
Sbjct: 420 -RGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRP 473
>gi|357513525|ref|XP_003627051.1| Poly(A) polymerase [Medicago truncatula]
gi|355521073|gb|AET01527.1| Poly(A) polymerase [Medicago truncatula]
Length = 633
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 328/612 (53%), Positives = 405/612 (66%), Gaps = 26/612 (4%)
Query: 78 LLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH 137
++++ANA I TFGSYRLGVHGPGAD+DTLC+GP + REEDFF H +L M EVTEL
Sbjct: 1 MVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTFHDILASMDEVTELQ 60
Query: 138 PVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 197
PVPDAHVPVMKFKF G+SIDLLYA +S ++PE+LDIS S+L N DE TVRSLNGCRV
Sbjct: 61 PVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVRSLNGCRVA 120
Query: 198 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 257
DQIL+LVP I+ FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSM
Sbjct: 121 DQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM 180
Query: 258 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 317
LVSRFFRVYTQWRWPNPV+LC+IEE LG VW P RNP+D+ HLMPIITPAYPCMNSSY
Sbjct: 181 LVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDRSHLMPIITPAYPCMNSSY 240
Query: 318 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENAD 377
NVS STLR+MM++FQ G++ICE +E N+ V W LF P+ FFE YKN+L+ID+ A + D
Sbjct: 241 NVSASTLRVMMEQFQYGNKICEDIELNK--VGWSALFVPYVFFEGYKNFLQIDVVAADVD 298
Query: 378 DLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVP 436
DLR WKGWVESRLRQLTL IER T LQCHP+P ++ D ++ + ++FMGLQRKQG
Sbjct: 299 DLRAWKGWVESRLRQLTLMIERDTIGKLQCHPYPREYIDDTRKCSHSAFFMGLQRKQGEV 358
Query: 437 VGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 496
V EG+QFDIR TV+ F+ +++MY KPGM I V+H+ RR +P +VFP G + SRPS+ T
Sbjct: 359 VQEGQQFDIRGTVEAFRHSINMYMFWKPGMDIHVSHIRRRQIPCYVFPDGFKRSRPSRST 418
Query: 497 WD----SRRALERKVSSHTKPGADDGRKRK----QTDDNVDTHLRNAKCHATMPSSSGEF 548
+ E +VS G + RK + D + H N + P +
Sbjct: 419 VPVENRPKSLQENEVSGTELRGRNIKRKYDDKGVKQDVVLKKHCANPFVESLTPGNYA-V 477
Query: 549 REGSPIMSTISSSSINLQFEHMD------ANELAGSNREKVENNLTDSIRGSRNSVEVSS 602
+ + S S+S N + + +D A GSN V + S GS V S
Sbjct: 478 SDCQELKSGESTSLTNSEQDELDRRMSPEAGTECGSNSSGVTS--VSSEDGSPEYVASVS 535
Query: 603 HNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLEL 662
G VD F+++ D+ KL I + S Q D L+ LE
Sbjct: 536 VAGYVDDSARAVEAMNNSRFDTTYMADSVKLGIGTLASANNEVLQ------DTLQTHLEP 589
Query: 663 KNQAKDFAGSTQ 674
A F ST+
Sbjct: 590 IAMAGMFLDSTK 601
>gi|359484334|ref|XP_002280350.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
gi|297738746|emb|CBI27991.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 306/515 (59%), Positives = 386/515 (74%), Gaps = 9/515 (1%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWV 65
++ G+T+PIS PTD + R+ +LEK L D +Y+ +EEA REE++ +L +VK WV
Sbjct: 8 AKQFGLTKPISYVKPTDFHIRRSFELEKVLWDGGVYQVEEEARKREEIIEKLRVVVKSWV 67
Query: 66 KKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
K+++R KG D++++ ANA I TFGSYRLGVHGPG+DIDTLC+GP + REEDFF LH
Sbjct: 68 KQVTRWKGYTDKMVENANALIVTFGSYRLGVHGPGSDIDTLCIGPSYVNREEDFFIRLHN 127
Query: 126 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 185
+L M V+EL P+P AHVPVMKFKF GVSIDLLYA +S V+P+DLDIS +SIL ADE
Sbjct: 128 ILIGMEGVSELLPIPHAHVPVMKFKFEGVSIDLLYASVSHLVVPDDLDISNESILYEADE 187
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
TVRSL+GCRV DQILRLVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+N ALLVAR
Sbjct: 188 PTVRSLSGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVAR 247
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 305
+CQLYPNA PSMLVSRFFRVYTQW WPNPV+LC IE+ LG VWDPRRNP D+ H MPI
Sbjct: 248 VCQLYPNANPSMLVSRFFRVYTQWHWPNPVMLCPIEDKELGFPVWDPRRNPLDRNHHMPI 307
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
ITPAYP MNSSY+VSTSTL MM +F ++IC +E N++ W LFEPF FF +Y+N
Sbjct: 308 ITPAYPNMNSSYSVSTSTLEAMMKQFHTANKICNDIELNKS--SWGALFEPFLFFRSYQN 365
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 424
YL++DI+A +ADDLR WKGWVESRLRQLTLK+ER T L C P P ++ D S+ +C+
Sbjct: 366 YLQVDITATDADDLRAWKGWVESRLRQLTLKVERCTIGKLLCVPCPREYVDTSRQCCHCT 425
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFK-QAVSMYTLRKPGMQISVAHVTRRNLPNFVF 483
YFMGL++K GV V GE DIR+ +EFK + V+M++ PGM+I V+HV + LP++VF
Sbjct: 426 YFMGLRKKPGVEV--GEVIDIRVATQEFKEEIVNMFSFWTPGMEIHVSHVLKNQLPSYVF 483
Query: 484 PGGVRPSRPSKGTWDSRRALERKVSSHT---KPGA 515
P R S + + + +RK++S KP A
Sbjct: 484 PDEYRKRSQSSKSINQQHQNKRKINSEMVDGKPSA 518
>gi|218195447|gb|EEC77874.1| hypothetical protein OsI_17161 [Oryza sativa Indica Group]
Length = 556
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/541 (51%), Positives = 355/541 (65%), Gaps = 37/541 (6%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M S + Q G+ EPISL GPT DL T +LE+ LR+ LYES EE +REEVL L +
Sbjct: 1 MASQSPQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESAEETAAREEVLRGLRGV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
V WVK+++R +G D + A A + FGSYRLGVHG G+DID L VGP + R+ DFF
Sbjct: 61 VDRWVKRLTRQRGYPDGMADRATALVLPFGSYRLGVHGRGSDIDALVVGPSYVDRDRDFF 120
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
G L L E V EL PVP AHVPV+K +F GV +DL+YA + L V+P DLD+S S+L
Sbjct: 121 GALAAALAETAGVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVL 180
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+ D T RSLNG RV D+ILRLVP FRTTLRC++ WAK RGVYSNVAGFLGG+ WA
Sbjct: 181 RGLDLATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWA 240
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQ--VWDPRRNP 296
+LVAR+C LYPNA PSML+ RFFRV+ +W+WP+PV+L AIE +G LGL VWDPRRNP
Sbjct: 241 ILVARVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNP 300
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEADVDWDTLFE 355
+DK HLMPI+TPAYPCMNS YNVS +TLR++ ++ G +C E ++ WD LF+
Sbjct: 301 RDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQ 360
Query: 356 PFTFFEAYKNYLRIDISAENA--DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 413
PF FF AYK+YL++D++ DDLR WKGWVESRLR L+ ++E T ML CH HP
Sbjct: 361 PFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQP 420
Query: 414 FSDK--SKPLY----CSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLRKPGM 466
++ + ++P S+F+GL + P + Q FD+R T + FK+ V MY +PGM
Sbjct: 421 YAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGM 480
Query: 467 QISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 526
+++VAHV R++LP++V R L R PG D KRK+ DD
Sbjct: 481 EVAVAHVRRKDLPSYVL-----------------RQLLR------SPGRHDQLKRKRADD 517
Query: 527 N 527
+
Sbjct: 518 D 518
>gi|242074144|ref|XP_002447008.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
gi|241938191|gb|EES11336.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
Length = 548
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 259/494 (52%), Positives = 336/494 (68%), Gaps = 12/494 (2%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M SS ++ EPISL GPT DL T +LEK LR+ +YES +E+ R EVL L I
Sbjct: 3 MASSQPKQQMFGEPISLVGPTPADLEATAELEKVLREAGMYESPQESAVRAEVLRDLQGI 62
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
V WVK+++ G D ++ EA A + FGSYRLGVHG G+DID L VGP R++DFF
Sbjct: 63 VDRWVKQLTLKHGYPDAMVDEATALLLPFGSYRLGVHGGGSDIDALVVGPSFVDRDQDFF 122
Query: 121 GELHQMLTEMPE-VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 179
G L L E E VT+L PVP AHVPVMK +F GV +DL+YA ++L V+P DLD+S ++
Sbjct: 123 GVLAGALAEATEAVTDLQPVPGAHVPVMKLRFRGVQVDLVYASVNLPVVPRDLDLSDRAV 182
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+ D T RS+NG RV D+ILRLVP FRT LRC++ WAK RGVYSNV+GFLGG+ W
Sbjct: 183 LRGLDHVTARSMNGVRVADEILRLVPDAAAFRTALRCVKLWAKARGVYSNVSGFLGGVAW 242
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKD 298
A+LVAR+CQLYPNA PSMLVSRFF+V +QW+WP PV+LC IE + LGL VWD RRNP+D
Sbjct: 243 AILVARVCQLYPNAAPSMLVSRFFKVLSQWKWPTPVMLCDIEHDDELGLPVWDGRRNPRD 302
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
+ HLMP+ITPAYPCMN +YNVS +T RI+ ++ Q GH C+ + D W LF+PF
Sbjct: 303 RTHLMPVITPAYPCMNCTYNVSQATQRIIKEQIQAGHVACQEIAAG-GDRGWGALFQPFP 361
Query: 359 FFEAYKNYLRIDIS-AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
FF +K+YL++D + A ++LR WKGWVESRLRQL K+ER T+ L CH +P + +
Sbjct: 362 FFRTHKSYLQVDATVAGGEEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAE 421
Query: 418 SKPLYC--SYFMGLQR------KQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQIS 469
L C S+F+GL + + P G+ QFD+R T EF Q V Y +PG++++
Sbjct: 422 PHGLRCASSFFVGLSKPQQQRQQPSPPQGQQPQFDLRATADEFLQDVYTYRFWRPGLELA 481
Query: 470 VAHVTRRNLPNFVF 483
V HV R++LP +V
Sbjct: 482 VKHVRRKDLPPYVM 495
>gi|413926073|gb|AFW66005.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 375
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 235/342 (68%), Positives = 284/342 (83%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
SS + G P+SLAGPT DL RT +LEK+L + LYE +EE+ RE+VL + IVK
Sbjct: 14 SSPKRYSGTDPPLSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLSEIGLIVK 73
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
WVK+++R KG +QL+++ANA +FTFGSYRLGVHGPGADIDTLCVGP + REEDFF
Sbjct: 74 EWVKQLTRKKGYAEQLVEQANAILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVT 133
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 182
LH +L E EV EL PVPDAHVPV+KFKF G+SIDLLYA +SL VIP D DISQ S+L +
Sbjct: 134 LHGILAEKEEVAELQPVPDAHVPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCD 193
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
DE TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAKRRGVYSN+ GFLGG+NWALL
Sbjct: 194 VDEATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALL 253
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE LG +WDPR+NP+D+ HL
Sbjct: 254 VARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHL 313
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN 344
MPIITPAYPCMNSSYNVSTSTLR++M++FQ G+++C+ + +N
Sbjct: 314 MPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKVCQVLPEN 355
>gi|357168295|ref|XP_003581579.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 552
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 259/485 (53%), Positives = 336/485 (69%), Gaps = 16/485 (3%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAK 72
+PISL GPT DL T +LEK+LRD LYES EE +RE+VL L IV WVK+++ +
Sbjct: 11 QPISLLGPTPADLESTSRLEKHLRDAGLYESPEELAAREDVLCELRAIVDRWVKRLTAQR 70
Query: 73 GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 132
G D ++ +A A + FGSYRLGVHG G+DID L VGP + R+ DFFG L +L+EM +
Sbjct: 71 GYPDGMVSQATAPVLPFGSYRLGVHGRGSDIDALVVGPSYVDRDHDFFGVLGGVLSEMTD 130
Query: 133 --VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 190
VTEL PVP AHVPV+K +F GV +DLL+A + L V+PEDLD+ S+L+ D TVRS
Sbjct: 131 DAVTELQPVPGAHVPVIKMRFRGVQVDLLFASVCLAVVPEDLDLRDRSVLRGMDLATVRS 190
Query: 191 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 250
+NG RV D+ILRLVP FRTTLRC++ WAK RGVYSNV GF GG+ WA+LVA +CQLY
Sbjct: 191 VNGVRVADEILRLVPDAGAFRTTLRCVKLWAKARGVYSNVMGFPGGVAWAILVAFVCQLY 250
Query: 251 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKYHLMPIITP 308
PNA PS+LVSRFF+V W+WPNPV L IE + L L VWDPRRNP+D+ HLMP++TP
Sbjct: 251 PNAAPSVLVSRFFKVLAPWKWPNPVKLRDIEHDDDDLRLLVWDPRRNPRDRTHLMPVVTP 310
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYPCMNS YNVS +TLR + + Q G+ +C+ + + A W LFEPF FF+ YK+YLR
Sbjct: 311 AYPCMNSCYNVSHATLRTITQQLQIGNAVCQKIVASGA--GWGALFEPFHFFKEYKSYLR 368
Query: 369 IDISAENA---DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY--C 423
+D+ DLR WKGWVESRLRQL +++E T ML CHP+P ++ K L
Sbjct: 369 VDVKVAGGGGEGDLREWKGWVESRLRQLVMRVETATAGMLLCHPNPQAYAAKPTDLQRTT 428
Query: 424 SYFMGLQRKQGVPVGEGEQ-----FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 478
S+F+GL + Q P + +Q FD+R T +EFK+ V MY +PGM++ V+H R++L
Sbjct: 429 SFFVGLSKPQPQPQEKEQQQPQVPFDLRETAEEFKRKVYMYVSWRPGMEVEVSHNRRKDL 488
Query: 479 PNFVF 483
P++V
Sbjct: 489 PSYVL 493
>gi|57834146|emb|CAE04327.2| OSJNBb0016D16.18 [Oryza sativa Japonica Group]
Length = 556
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 274/541 (50%), Positives = 353/541 (65%), Gaps = 37/541 (6%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M S + Q G+ EPISL GPT DL T +LE+ LR+ LYES EE +REEVL L +
Sbjct: 1 MASQSPQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESAEETAAREEVLRGLRGV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
V WVK+++R +G D + A A + FGSYRLGVHG G+DID L VGP + + DFF
Sbjct: 61 VDRWVKRLTRQRGYPDGMADRATALVLPFGSYRLGVHGRGSDIDALVVGPSYVDCDRDFF 120
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
G L L E V EL PVP AHVPV+K +F GV +DL+YA + L V+P DLD+S S+L
Sbjct: 121 GALATALAETAAVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVL 180
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+ D T RSLNG RV D+ILRLVP FRTTLRC++ WAK RGVYSNVAGFLGG+ WA
Sbjct: 181 RGLDLATARSLNGVRVADEILRLVPDATAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWA 240
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQ--VWDPRRNP 296
+LVA +C LYPNA PSML+ RFFRV+ +W+WP+PV+L AIE +G LGL VWDPRRNP
Sbjct: 241 ILVACVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNP 300
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEADVDWDTLFE 355
+DK HLMPI+TPAYPCMNS YNVS +TLR++ ++ G +C E ++ WD LF+
Sbjct: 301 RDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQ 360
Query: 356 PFTFFEAYKNYLRIDISAENA--DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 413
PF FF AYK+YL++D++ DDLR WKGWVESRLR L+ ++E T ML CH HP
Sbjct: 361 PFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQP 420
Query: 414 FSDK--SKPLY----CSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLRKPGM 466
++ + ++P S+F+GL + P + Q FD+R T + FK+ V MY +PGM
Sbjct: 421 YAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGM 480
Query: 467 QISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 526
+++VAHV R++LP++V R L R PG D KRK+ DD
Sbjct: 481 EVAVAHVRRKDLPSYVL-----------------RQLLR------SPGRHDQLKRKRADD 517
Query: 527 N 527
+
Sbjct: 518 D 518
>gi|414585702|tpg|DAA36273.1| TPA: hypothetical protein ZEAMMB73_834827 [Zea mays]
Length = 552
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 326/481 (67%), Gaps = 10/481 (2%)
Query: 12 TEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRA 71
+EPISL GPT D+ T +LEK LR+ +YES EE+ R EVL L IV +WVK++
Sbjct: 10 SEPISLVGPTPADIEATAQLEKLLREAGMYESAEESAVRAEVLRDLQGIVDLWVKQLMLK 69
Query: 72 KGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP 131
G D ++ EA A + FGSYRLGV G G+DID L VGP R++DFFG L +L E
Sbjct: 70 HGYPDAMVDEATAFVLPFGSYRLGVLGGGSDIDALVVGPSFVDRDQDFFGVLAGVLAETE 129
Query: 132 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 191
VTELHPVP AHVPVMK +F GV +DL+YA ++L V+P +LD+S +L+ D T RS+
Sbjct: 130 AVTELHPVPGAHVPVMKLRFRGVQVDLVYASVNLPVVPRNLDLSDRHVLRGLDHVTARSM 189
Query: 192 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 251
NG RV D+I+RLVP FRTTLRC++ WAK RGVYSNV+GFLGG+ WA+LVAR+CQLYP
Sbjct: 190 NGVRVADEIVRLVPDAAAFRTTLRCVKLWAKSRGVYSNVSGFLGGVAWAILVARVCQLYP 249
Query: 252 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAY 310
NAVPSMLVSRFF+V++ WRWP PV+LC IE + LGL VWD RRN D+ HLMP+ITPAY
Sbjct: 250 NAVPSMLVSRFFKVFSHWRWPIPVMLCDIEHDDELGLPVWDVRRNLPDRSHLMPVITPAY 309
Query: 311 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 370
PCMN +YNVS +T R++ ++ Q G C+ + DW LF+P FF +K+YL++D
Sbjct: 310 PCMNCTYNVSRATHRVIKEQIQAGDVACQKIAAGGGR-DWGALFQPSPFFSTHKSYLQVD 368
Query: 371 IS-AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL--YCSYFM 427
+ A A++LR WKGWVESRLRQL K+ER T+ L CH +P + + L S+F+
Sbjct: 369 AAVAGGAEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRRASSFFV 428
Query: 428 GL-----QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 482
GL Q K P G FD+R TV EF+Q V Y +PG+++ V HV R LP +V
Sbjct: 429 GLSKPQQQHKPHPPEGYPPFFDLRATVLEFQQDVYSYKFWRPGLELVVKHVRRNKLPAYV 488
Query: 483 F 483
Sbjct: 489 M 489
>gi|66806183|ref|XP_636814.1| poly polymerase [Dictyostelium discoideum AX4]
gi|74852689|sp|Q54J73.1|PAP_DICDI RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|60465216|gb|EAL63311.1| poly polymerase [Dictyostelium discoideum AX4]
Length = 809
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/543 (48%), Positives = 341/543 (62%), Gaps = 31/543 (5%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+TEPIS A P+ D + +LE L NL+ES EE+ REE+LG+L+QIV+ W K++
Sbjct: 53 LGVTEPISTAPPSSIDFKLSTELENTLISFNLFESPEESRKREEILGKLNQIVREWAKQV 112
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S KG +Q E AKIFTFGSYRLGVHGPG+DIDTLCVGP+H R DFF +L +L
Sbjct: 113 SLKKGYPEQTASEVVAKIFTFGSYRLGVHGPGSDIDTLCVGPKHIMRS-DFFDDLSDILK 171
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQT 187
PE+TE V DA VPV+ FSG+ IDL+YA+L+L IPE+L D+ +S L+N DE++
Sbjct: 172 VHPEITEFTTVKDAFVPVITMVFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNIDEKS 231
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
+ SLNGCRVTDQIL+LVP I NFR LRC++ WA RRG+YSN+ GFLGG++WALL ARIC
Sbjct: 232 ILSLNGCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTARIC 291
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMPII 306
QLYPN+ PS ++ RFF+VY W+WP P+LLC I+EG LG +VW+P+R DK HLMPII
Sbjct: 292 QLYPNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPKR---DKAHLMPII 348
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP MNS+YNVS STL++M EF RG EI +E E W L E FF Y Y
Sbjct: 349 TPAYPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIETGEC--TWKNLLEKCDFFTRYSFY 406
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK----SKP-- 420
+ ID + N +D R W+GW+ES+LR L +E T M P+P F++ + P
Sbjct: 407 IEIDCYSMNEEDSRKWEGWIESKLRFLISNLE-STPKMKFAVPYPKGFTNNLHKANNPDQ 465
Query: 421 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRN 477
+ S+FMGL G + D+ V EF + + +P M I V ++ ++
Sbjct: 466 ICTSFFMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQ 525
Query: 478 LPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKC 537
LP FV G P P K T +K SS +P A ++K +N D L + K
Sbjct: 526 LPAFVKDEG--PEEPVKTT--------KKRSSTGEPSA---TRKKLKSENSDNKLNSPKS 572
Query: 538 HAT 540
T
Sbjct: 573 PIT 575
>gi|307107277|gb|EFN55520.1| hypothetical protein CHLNCDRAFT_23208 [Chlorella variabilis]
Length = 632
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/495 (51%), Positives = 329/495 (66%), Gaps = 28/495 (5%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
R EPIS A PT DL TR LE++LRD LYESQEEA RE VLGRLD +VK W++
Sbjct: 4 RRPFVEPISQAEPTPQDLKHTRDLEQHLRDQGLYESQEEAELREVVLGRLDGLVKEWIRG 63
Query: 68 ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE----L 123
++ +G + +ANAKIFTFGSYRLGVHGPGADIDTLCVGP +ATRE DFFG L
Sbjct: 64 VAALRGHPPE---DANAKIFTFGSYRLGVHGPGADIDTLCVGPSYATREGDFFGSEPHCL 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
ML +PEV L V A+VPVM+ KF G+SIDLLYARLS+ ++ EDLDI L++
Sbjct: 121 QAMLCALPEVLALRAVTAAYVPVMEMKFCGISIDLLYARLSVPLVREDLDIGATHTLRHC 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D+Q+VRSLNGCRVTD ILR VP + +FRT LRC++ WA+RRGVYSNV G+LGG+NWA+LV
Sbjct: 181 DDQSVRSLNGCRVTDMILREVPSVPHFRTALRCLKLWAERRGVYSNVTGYLGGVNWAILV 240
Query: 244 ARICQLYP---------NAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPR 293
A +C+L P P + V +VY+QW WP P++L AIE + SL + VWDPR
Sbjct: 241 AYVCKLQPCLLASPPHLGPAPCLPVP---QVYSQWAWPTPIMLRAIERDPSLAMPVWDPR 297
Query: 294 RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEADV-DWD 351
NP+D+ HLMPIITPAYPCMNSSYNVS TL +M +EF+RG E+C M N + + DW
Sbjct: 298 ENPRDRTHLMPIITPAYPCMNSSYNVSECTLAVMAEEFRRGDEVCGRIMTHNGSGLTDWA 357
Query: 352 TLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 411
L EP FFE +K++L++++ A + +D W+GWV SR+R L +K+++ Q
Sbjct: 358 QLLEPLPFFEGFKHFLQVEVMASSQEDFEVWEGWVHSRMR-LLIKVDQQQQQQQQQQDGG 416
Query: 412 GDFSDKSKPLY----CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ 467
G S P C YFMGL +K+ + + + + D+ V EF V + R+ GM
Sbjct: 417 GGGSVADPPAQQQPRCFYFMGLSKKKAMIIPQS-KVDLTQPVNEFAHKVKEFEQRREGMD 475
Query: 468 ISVAHVTRRNLPNFV 482
ISV H+ +R LP +V
Sbjct: 476 ISVRHLLQRQLPEWV 490
>gi|384247369|gb|EIE20856.1| Poly(A) polymerase, partial [Coccomyxa subellipsoidea C-169]
Length = 504
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/508 (48%), Positives = 319/508 (62%), Gaps = 41/508 (8%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAK 72
EP S A PT D +T LE LR+ LYES EEAV REEVLGRLD++VK WV+++
Sbjct: 1 EPFSRAPPTTKDFQQTADLELCLREQGLYESNEEAVLREEVLGRLDRLVKEWVQRVCAWL 60
Query: 73 GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE----LHQMLT 128
GL + E NAKIFTFGSYRLGVHGPGADIDTLCVGPRH +R+ FFG L +ML+
Sbjct: 61 GLGEFGEVETNAKIFTFGSYRLGVHGPGADIDTLCVGPRHVSRDLHFFGTEEHCLQKMLS 120
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
++PEVTEL PV D+ VPV+K KFSGVSIDLLYA+L+ V+PE+LD+ S L+NAD+++V
Sbjct: 121 DLPEVTELQPVVDSFVPVIKMKFSGVSIDLLYAQLATAVVPENLDVGAISTLRNADDKSV 180
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRVTD +L V I+ FRT LR ++ WA+RRG+YSNV G+LGG+NWA+LVA C+
Sbjct: 181 RSLNGCRVTDTLLNQVESIETFRTALRVIKLWAERRGIYSNVVGYLGGVNWAILVAYTCK 240
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYP + S++V RFF+V+ +W WP P++L IE ++GLQVWDPR NP+D HLMPIITP
Sbjct: 241 LYPCGIASVIVDRFFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINPRDSMHLMPIITP 300
Query: 309 AYPCMNSSYNVSTSTLRIM------------MDEFQRGHEICEAMEKNEADVDWDTLFEP 356
AYP NSSYNVS STL M +EF+ G ++C + W L EP
Sbjct: 301 AYPAANSSYNVSESTLAAMKARTQLHQTCLLQEEFEHGEKVCTRILAEGGLTKWHKLLEP 360
Query: 357 FTFFEAYKNYLRIDISAENADDL-------------RNWKGWVESRLRQLTLKIERHTYN 403
FF Y+NYL+ + + + W GWV SRLRQL +++E
Sbjct: 361 VPFFRNYRNYLQARLFLTPSQFIPFATCCFMHCILQEAWDGWVHSRLRQLVMRVE----P 416
Query: 404 MLQCHPHPGDF------SDKSKPLYCSYFMGLQRK--QGVPVGEGEQFDIRLTVKEFKQA 455
+ P P +P C YFMGL++K P G ++ V+EFK
Sbjct: 417 FVTVRPWPKAIFPPRGPEAAGQPRRCFYFMGLKKKPLPSQPGGRASSVNLNNPVQEFKNQ 476
Query: 456 VSMYTLRKPGMQISVAHVTRRNLPNFVF 483
V Y K GM + + H ++ LP+FV
Sbjct: 477 VMGYLSWKEGMHVLITHQMQKALPSFVL 504
>gi|328871002|gb|EGG19374.1| polyA polymerase [Dictyostelium fasciculatum]
Length = 803
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/533 (46%), Positives = 333/533 (62%), Gaps = 49/533 (9%)
Query: 2 GSSNGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
GSSN Q+ G+TEPISLA PT D ++ +LE LR NL+E EE+ REEVLG+LD I
Sbjct: 69 GSSNQQQYYGVTEPISLASPTSIDTKQSTELETTLRGFNLFEPPEESRLREEVLGKLDAI 128
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK W K+S KG +Q+ E AKIFT+GSYRLGVH G+DIDTLCV P+H R DFF
Sbjct: 129 VKQWAIKVSVLKGFTEQMASEVIAKIFTYGSYRLGVHASGSDIDTLCVTPKHIMRA-DFF 187
Query: 121 GELHQMLTEMPEVTE---------------------------------LHPVPDAHVPVM 147
G L +L PE+TE + PV DA VPV+
Sbjct: 188 GTLADVLCVHPEITEFTVSTFFSGSSGSSGGSSSGSSGLQRILIKKTMVMPVKDAFVPVI 247
Query: 148 KFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 206
K F G+ IDL++ARLS+ IPEDL D+ ++ L+N D++ + SLNGCRVTDQILRLVP
Sbjct: 248 KMIFCGIPIDLIFARLSIPAIPEDLNDLIDENYLKNVDDKCIVSLNGCRVTDQILRLVPN 307
Query: 207 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 266
+ FR LRC++ WA+RRGVYSNV G LGG++WALL ARICQLYPNA PS +++RFF++Y
Sbjct: 308 VTTFRMALRCIKLWAQRRGVYSNVLGLLGGVSWALLTARICQLYPNAAPSTIINRFFKIY 367
Query: 267 TQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 325
W+WP+P+LLC I++ G L +VW+ +R DK HLMPI+TPAYP MNS+YNVS STL
Sbjct: 368 DGWKWPSPILLCQIQDGGQLAAKVWNQKR---DKSHLMPILTPAYPSMNSTYNVSRSTLS 424
Query: 326 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 385
++ EF RG EI + ++ E W L E FF Y+ YL+ID+SA D R W+GW
Sbjct: 425 LLKSEFSRGAEITKKIDSGER--KWTDLVEKGDFFTRYRFYLQIDVSAPEEDTHRKWEGW 482
Query: 386 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL---YCS-YFMGLQRKQGVPVGEGE 441
+ES+LR L +E+ T NM P+ F++K+ + C+ +FMGLQ +G +
Sbjct: 483 IESKLRILISNLEQ-TPNMKFAIPYAKSFANKASAVNGGICTCFFMGLQFNFSTAIGADK 541
Query: 442 QFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 494
D+ V F + + + P +++ + ++ ++NLP FV G P P K
Sbjct: 542 NVDLTGAVTSFTNLIKDWPGKLPTIEMKIHYIKKKNLPVFVKDEG--PEHPPK 592
>gi|452825557|gb|EME32553.1| poly(A) polymerase [Galdieria sulphuraria]
Length = 584
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/546 (45%), Positives = 342/546 (62%), Gaps = 53/546 (9%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
G+ G G+TEPIS A PT D +R+LE++L + NLYE+ +EA RE+VL L Q+
Sbjct: 7 FGTRTGGYKGVTEPISTATPTPLDYRLSRELEEFLHNRNLYENNKEAQRREQVLAELHQL 66
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+ WV+++SR++G+ ++++ E AK+FTFGSYRLGV+ P ADIDTLC+ PR+ R D F
Sbjct: 67 INEWVRRVSRSQGIAEEIVSETEAKLFTFGSYRLGVNPPNADIDTLCIVPRYVERNRDVF 126
Query: 121 G-------------ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV 167
G L + P++ ++ PV DAHVPV+KFKF+GV IDLL ARL
Sbjct: 127 GIPSESGSVPEEENVLVNIFKSHPKIEDVVPVFDAHVPVVKFKFAGVEIDLLCARLQFSK 186
Query: 168 IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVY 227
+PE LDI DSIL+N D++T RS+NG RVTD ILRLVP ++ FRTTLR ++FWAK RG+Y
Sbjct: 187 LPERLDILDDSILRNVDDETQRSVNGVRVTDAILRLVPNVETFRTTLRAVKFWAKNRGIY 246
Query: 228 SNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG--SL 285
SNV GFLGG++WA+LVARICQLYP+A ++++SRFFRVY+QW+WPNPVLL +I G S
Sbjct: 247 SNVLGFLGGVSWAILVARICQLYPHAAANVILSRFFRVYSQWKWPNPVLLTSISPGKPSC 306
Query: 286 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAM---- 341
G +VW+P P D+ HLMP+ITPAYP MNS++NVS +TLRI+ +E RG EI + +
Sbjct: 307 GFKVWNPAVFPADRKHLMPVITPAYPSMNSTHNVSRTTLRIIQEEIHRGLEITDKILCQS 366
Query: 342 ---------EKNEAD-------------------VDWDTLFEPFTFFEAYKNYLRIDISA 373
E E D + W LFE FF +KNYL+I++ +
Sbjct: 367 NSSRKTISTEDTENDQTTQVEHSEETNLVKETEVMTWSKLFERTDFFSKFKNYLQINVIS 426
Query: 374 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRK- 432
A++ R W G+VES+LR LTLK+E ++ ++ +P+P ++ S+F+GL
Sbjct: 427 GTAENQRKWHGFVESKLRVLTLKLEILSHTLI--YPYPVPYTRPGVQFCESFFIGLSFSL 484
Query: 433 QGVPVGEG---EQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 489
+P G + D+ V E+ V + R M++SV HV R+ LP +VF
Sbjct: 485 PKLPNQNGSKERKIDMSGPVSEWVNYVLSWPFRTSDMEVSVEHVKRKFLPEYVFKDENHR 544
Query: 490 SRPSKG 495
SR K
Sbjct: 545 SRKRKS 550
>gi|281200800|gb|EFA75017.1| polyA polymerase [Polysphondylium pallidum PN500]
Length = 757
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/531 (45%), Positives = 336/531 (63%), Gaps = 35/531 (6%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
+N G+T PIS + PT DL + +LE L+ NL+E+ EE+ +EE+LG+L+ IV+
Sbjct: 22 TNQITYGVTVPISFSNPTPADLKLSTELEDTLKSFNLFETPEESGKKEEILGKLNLIVRK 81
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
WV +S +G +Q+ E AKIFTFGSYRLGV GP +DIDTLCV P+H R DFF L
Sbjct: 82 WVIDVSLKRGFTEQMSLEVVAKIFTFGSYRLGVSGPSSDIDTLCVAPKHIMRS-DFFDFL 140
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQN 182
+ L P++TEL+ V DA+VPV+ FSG++IDL++ARLSL I ED+ D+ D+ L+N
Sbjct: 141 GEALKVHPDITELNMVKDAYVPVITMIFSGIAIDLIFARLSLSSISEDMNDLIDDAYLKN 200
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
D+Q++ SLNGCRVTD+IL LVP FR LR ++ WA+RRG+YSNV GFLGG++WALL
Sbjct: 201 LDDQSITSLNGCRVTDKILTLVPSRATFRMALRFIKLWAQRRGIYSNVLGFLGGVSWALL 260
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRW----PNPVLLCAIEEGSL-GLQVWDPRRNPK 297
ARICQLYPNA PS +++RFF++Y WRW P PVLLC I++G + +VW+ +R
Sbjct: 261 TARICQLYPNAAPSTIINRFFKIYETWRWGVPGPTPVLLCPIQDGGIFAAKVWNQKR--- 317
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
DK HLMPI+TPAYP MNS+YNVS STL ++ DEF RG++I + +E EA +W+ L E
Sbjct: 318 DKSHLMPILTPAYPSMNSTYNVSKSTLSLLKDEFARGNQIAQKLESGEA--NWNKLLEKS 375
Query: 358 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
FF Y+ YL+ID SA+N ++ R W+GW+ES+LR+L +E+ T M P P F +K
Sbjct: 376 DFFSRYQFYLQIDCSAQNEEEHRKWEGWIESKLRKLISFLEQ-TPKMKFAIPFPKSFENK 434
Query: 418 SKP-------------------LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 458
P + S+FMGL G + DI V +F +
Sbjct: 435 PTPAATTTAANGEAVTDANNSNVCTSFFMGLGFNFSNAPGADKSVDITKAVIDFTHLIKD 494
Query: 459 YTLRKPGMQISVAHVTRRNLPNFV---FPGGVRPSRPSKGTWDSRRALERK 506
+ + P M++ V ++ RR LP FV P +P +G+ +S ++K
Sbjct: 495 WAGKGPTMEMKVHYIKRRQLPAFVKAEAPPEEKPKAKKRGSANSADVAKKK 545
>gi|222629442|gb|EEE61574.1| hypothetical protein OsJ_15948 [Oryza sativa Japonica Group]
Length = 556
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 259/542 (47%), Positives = 335/542 (61%), Gaps = 39/542 (7%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M S + Q G+ EPISL GPT DL T +LE+ LR+ LYES R +
Sbjct: 1 MASQSPQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESARGDGGPGGGAPRPPRR 60
Query: 61 VK-IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF 119
+ + + A G + FGS LGVHG G+DID L VGP + R+ DF
Sbjct: 61 RRPLGEAPHAAAPGTPTAWPDRGHRPGAPFGS-TLGVHGRGSDIDALVVGPSYVDRDRDF 119
Query: 120 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 179
FG L L E V EL PVP AHVPV+K +F GV +DL+YA + L V+P DLD+S S+
Sbjct: 120 FGALAAALAETAAVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSV 179
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+ D T RSLNG RV D+ILRLVP FRTTLRC++ WAK RGVYSNVAGFLGG+ W
Sbjct: 180 LRGLDLATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGW 239
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQ--VWDPRRN 295
A+LVA +C LYPNA PSML+ RFFRV+ +W+WP+PV+L AIE +G LGL VWDPRRN
Sbjct: 240 AILVACVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHNDGELGLSLPVWDPRRN 299
Query: 296 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEADVDWDTLF 354
P+DK HLMPI+TPAYPCMNS YNVS +TLR++ ++ G +C E ++ WD LF
Sbjct: 300 PRDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLF 359
Query: 355 EPFTFFEAYKNYLRIDISAENA--DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG 412
+PF FF AYK+YL++D++ DDLR WKGWVESRLR L+ ++E T ML CH HP
Sbjct: 360 QPFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQ 419
Query: 413 DFSDK--SKPLY----CSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLRKPG 465
++ + ++P S+F+GL + P + Q FD+R T + FK+ V MY +PG
Sbjct: 420 PYAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPG 479
Query: 466 MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 525
M+++VAHV R++LP++V R L R PG D KRK+ D
Sbjct: 480 MEVAVAHVRRKDLPSYVL-----------------RQLLR------SPGRHDQLKRKRAD 516
Query: 526 DN 527
D+
Sbjct: 517 DD 518
>gi|224141615|ref|XP_002324162.1| predicted protein [Populus trichocarpa]
gi|222865596|gb|EEF02727.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/287 (73%), Positives = 245/287 (85%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+R GIT+PIS+AGPT+ DL R +LEK+L D L ES++E + REEVLGR+DQIVK WVK
Sbjct: 1 KRYGITKPISVAGPTEPDLHRNAELEKFLVDSGLNESKDETIKREEVLGRIDQIVKDWVK 60
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+++R +G DQ+++EANA IFTFGSYRLGVHGPGADIDTLCVGP + REEDFF LH
Sbjct: 61 QLTRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFITLHDK 120
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L E EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L DEQ
Sbjct: 121 LAETEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISNGSVLYEVDEQ 180
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 181 TVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 240
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 293
CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG VWDPR
Sbjct: 241 CQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEEDDLGFPVWDPR 287
>gi|330796347|ref|XP_003286229.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
gi|325083816|gb|EGC37259.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
Length = 671
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/486 (48%), Positives = 312/486 (64%), Gaps = 28/486 (5%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+TEPIS + P+ DL + LE L NL+ES EE+ REEVLG+L+QIV+ W K++
Sbjct: 46 LGVTEPISTSPPSALDLKLSNDLENTLISFNLFESPEESRKREEVLGKLNQIVREWAKQV 105
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S KG +Q E AKIFTFGSYRLGVHGP +DIDTLCVGP+H R DFF +L + L
Sbjct: 106 SIKKGYPEQTAAEVVAKIFTFGSYRLGVHGPNSDIDTLCVGPKHIMR-SDFFDDLSESLK 164
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQT 187
PE+TE V DA VPV+ FSGV IDL+YARLSL IPE+L D+ + L+N DE++
Sbjct: 165 THPEITEFTTVKDAFVPVINMVFSGVPIDLIYARLSLTAIPEELNDLIDEGYLKNVDEKS 224
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
+ SLNGCRV DQIL+LVP I NFR LRC++ WA FLGGI WALL ARIC
Sbjct: 225 ILSLNGCRVADQILKLVPNIPNFRMALRCIKLWA---------ISFLGGITWALLTARIC 275
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLC-AIEEGSLGLQVWDPRRNPKDKYHLMPII 306
QLYPN+ PS +++RFF+VY W+WP PVLL +E G+L +VW+ +R DK HLMPI+
Sbjct: 276 QLYPNSAPSTIINRFFKVYENWKWPAPVLLTHLVEGGALAAKVWNAKR---DKAHLMPIL 332
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP MNS+YNVS ST++++ +EF RG EI +E NE+ ++ L E FF Y+ Y
Sbjct: 333 TPAYPMMNSTYNVSKSTMQLLKNEFVRGAEITRKIETNES--TYNALLEKSDFFTRYRFY 390
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD----KSKP-- 420
++ID SA N +D R W+GW+ES+LR L +E T M P P FS+ +S P
Sbjct: 391 IQIDCSAGNEEDHRKWEGWIESKLRFLISNLE-MTPKMKYAVPFPKSFSNLIHKESHPDQ 449
Query: 421 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRR 476
+ ++FMGL G + D+ V EF + + +P + I V ++ ++
Sbjct: 450 ICTTFFMGLVFNFPTTPGADKSVDLTKAVSEFTSTIKEWLRTQPNPETMADIKVQYIKKK 509
Query: 477 NLPNFV 482
LP+F+
Sbjct: 510 QLPSFI 515
>gi|120952595|ref|NP_991321.2| poly(A) polymerase alpha [Danio rerio]
Length = 723
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/608 (41%), Positives = 355/608 (58%), Gaps = 56/608 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + DL+ TRKL + LR ++E + E R VLG+L+ +VK W++
Sbjct: 17 KHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIR 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S AK + ++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++
Sbjct: 77 EVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK+Y
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA+ W G VES++R L +E++ + L Q P P + +DK +
Sbjct: 374 IVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGPKEGNDKEE-F 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQ-------FDIR-LTVKEFKQAVSMYTLRKPGMQISVAHV 473
+ +G+ K+ EG + FDI+ T ++QA++ + M+I+ HV
Sbjct: 433 STMWVIGIVFKK----MEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQ-DMKITAMHV 487
Query: 474 TRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLR 533
R+ L + A+ R H+ G R D N+D L
Sbjct: 488 KRKQLHQLL----------------PEVAIHRSKRKHSSDGV-----RAMNDSNLDLSLD 526
Query: 534 NAKCHA----TMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTD 589
+ + T PS++ R SP ST +++ + +EL G EN
Sbjct: 527 SDNSMSVPSPTGPSAAKIARAPSPQGSTGTAT---------NTSELQGKTEATGENTHLA 577
Query: 590 SIRGSRNS 597
S+ G+ +S
Sbjct: 578 SVDGTSSS 585
>gi|157109674|ref|XP_001650777.1| poly a polymerase [Aedes aegypti]
gi|108878961|gb|EAT43186.1| AAEL005356-PA [Aedes aegypti]
Length = 780
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/507 (44%), Positives = 331/507 (65%), Gaps = 27/507 (5%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
SN + LG+T ISLA P +D+ +T +LEK L N++E + E R E+L +L+ +VK
Sbjct: 83 SNTRTLGMTSAISLAEPKPEDIQKTTELEKALEPYNVFEEESELNHRMEILAKLNTLVKQ 142
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
WV+ +S +K + + L ++ KI+TFGSYRLGVH GADID LCV PR+ R D+FG
Sbjct: 143 WVRDVSISKNMPEALAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFGSF 201
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
++L + PEVTE V +A VPV+K F G+ IDLL+ARL+L IP++ D+ D +L+N
Sbjct: 202 FELLKKQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDKLLKNL 261
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D ++VRSLNGCRVTD+ILRLVP I NFR LR ++ WAK+ G+YSN G+ GG++WA+LV
Sbjct: 262 DPKSVRSLNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNSLGYFGGVSWAMLV 321
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
AR CQLYPNAV + LV +FF V+++W+WP PVLL + +LG QVWDPR N +D++HLM
Sbjct: 322 ARTCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLM 381
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PIITPAYP NS++NVS+ST ++M++EF RG +I + + ++A WD LFE +FF Y
Sbjct: 382 PIITPAYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLSKA--GWDKLFEAPSFFFKY 439
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--------- 414
++++ + +++ NADD W G VES++R L L +ER+ + L H +P F
Sbjct: 440 RHFIVLLVTSNNADDHLEWCGLVESKIRYLILNLERNQHINL-AHVNPKCFEQHEQNQTE 498
Query: 415 ----SDKSKP-LYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT----LRKP 464
SD S+ CS +F+GL+ ++ E D+ +++ F +V + L K
Sbjct: 499 RQRESDGSRASTLCSLWFIGLEFER----SENLNVDLTESIQSFTDSVHKHAVHIKLLKD 554
Query: 465 GMQISVAHVTRRNLPNFVFPGGVRPSR 491
GM+I HV R+ L ++ P ++ R
Sbjct: 555 GMKIEARHVRRKQLSQYLDPNLLKRER 581
>gi|270004464|gb|EFA00912.1| hypothetical protein TcasGA2_TC003818 [Tribolium castaneum]
Length = 565
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/539 (42%), Positives = 340/539 (63%), Gaps = 17/539 (3%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T IS A P DL++T++LE+ L+ ++ES++E R +LG+L +VK W+K +
Sbjct: 29 LGMTSAISTAPPKPSDLLKTQELEEALKPFGVFESEQELNHRMVILGKLYSLVKQWIKDV 88
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S +K + + + + KI+TFGSYRLGVH GADID LCV PRH +R DFFG +++L
Sbjct: 89 SISKNMPESVAENVGGKIYTFGSYRLGVHNRGADIDALCVAPRHISRN-DFFGSFYELLK 147
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+ PEVT+L V +A VPV+K F G+ ID+L+ARL L IP+ +D+ D +L+N D++ V
Sbjct: 148 KQPEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLLLKEIPDSMDLRDDLLLKNLDQKCV 207
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRVTD+ILRLVP + NFR LR ++ WAKR G+YSN G+LGG++WA+LVAR CQ
Sbjct: 208 RSLNGCRVTDEILRLVPNVDNFRLALRAIKLWAKRHGIYSNALGYLGGVSWAMLVARTCQ 267
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNA P+ LV +FF V++QW+WP PVLL +LG VWDPR N +D+YHLMPIITP
Sbjct: 268 LYPNAAPATLVHKFFLVFSQWKWPQPVLLKQPSNVNLGFAVWDPRVNIQDRYHLMPIITP 327
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP NS++NVS ST +I+M+EF+ G ++ + + ++ WD LFEP FF YK+++
Sbjct: 328 AYPQQNSTFNVSGSTRQIIMEEFKLGLQLTDDIMLSKQ--TWDKLFEPPLFFMKYKHFIV 385
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLYCS 424
+ +SAE+ +D W G VES+ R L +ER+ + L H +P F S + +CS
Sbjct: 386 LLVSAESPEDHLEWCGLVESKFRLLIGTLERNQHITL-AHINPESFSLLESQRESNTHCS 444
Query: 425 -YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 483
+F+GL+ + + FDI+ + + ++ K GM++ HV R+ L ++
Sbjct: 445 MWFIGLEFAKSENLNVNLTFDIQQFTETVQNHALNISMLKEGMKLEARHVKRKQLYQYLS 504
Query: 484 PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLR-NAKCHATM 541
P ++ R + T S+ + PG D DN + +R + + H+T+
Sbjct: 505 PSLLKRERKTSITVKSQSNGTDSKKRLSDPGNSDS-------DNPNKKIRLSEEMHSTV 556
>gi|432902553|ref|XP_004077012.1| PREDICTED: poly(A) polymerase gamma-like [Oryzias latipes]
Length = 834
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/490 (47%), Positives = 316/490 (64%), Gaps = 12/490 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT ISLA P + D TRKL + ++ ++E +EE R VLG+L+ VK W+
Sbjct: 18 KHYGITSAISLAPPREIDHEYTRKLCEAMQPFGVFEDEEELNHRLAVLGKLNNFVKEWIA 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS K L + KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFQSFFEK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DSIL+N D +
Sbjct: 137 LKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST IM +EF+ G + + + + +A +W LFEP +FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKA--EWPKLFEPPSFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSK-PLY 422
+ + SA ++ W G VES++R L +ER+ Y + +P PG ++S+
Sbjct: 375 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRSENDFV 434
Query: 423 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNL 478
C +F+G+ K+ V E D+ ++ F V + + K GM+I HV ++ L
Sbjct: 435 CMWFIGIIFKK-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQL 493
Query: 479 PNFVFPGGVR 488
++ P V+
Sbjct: 494 HQYLPPELVQ 503
>gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/502 (46%), Positives = 322/502 (64%), Gaps = 12/502 (2%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G + GIT ISLA P + D + T+KL + ++ ++ES++E R VLG+L+ V
Sbjct: 14 GQQPQKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFESEDELNHRLAVLGKLNSFV 73
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K W+ +IS +K L + KIFTFGSYRLGVH GADID LCV PRH R DFF
Sbjct: 74 KEWIAEISESKNLPLSAVVNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFS 132
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
+ L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DS+L+
Sbjct: 133 SFFEKLKRLDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLR 192
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D + +RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAM 252
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YH
Sbjct: 253 LVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYH 312
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS+YNVSTST IM +EF+ G + + + + +A DW LFEP FF+
Sbjct: 313 LMPIITPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKA--DWSKLFEPPNFFQ 370
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKS 418
YK+Y+ + SA ++ W G VES++R L +ER+ Y + +P PG + +
Sbjct: 371 KYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENHN 430
Query: 419 KPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 473
+ + S +F+G+ K+ + + D+ ++ F V S + K GM I HV
Sbjct: 431 ENEFVSMWFIGISFKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHV 489
Query: 474 TRRNLPNFVFPGGVRPSRPSKG 495
++ L +++ P V+ + S G
Sbjct: 490 KKKQLHHYLPPELVQRKKKSLG 511
>gi|380022244|ref|XP_003694961.1| PREDICTED: poly(A) polymerase gamma [Apis florea]
Length = 619
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/562 (42%), Positives = 341/562 (60%), Gaps = 13/562 (2%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T IS+A P D RT +L++ L+ N++ES+EE R E+L +L+ +VK W++
Sbjct: 28 LGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDT 87
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S A+ + + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F ++L
Sbjct: 88 SVARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFTSFFELLK 146
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D++ V
Sbjct: 147 MQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCV 206
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR CQ
Sbjct: 207 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQ 266
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPIITP
Sbjct: 267 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITP 326
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK+Y+
Sbjct: 327 AYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYKHYIV 384
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYCS-Y 425
+ + A+D W G VES++R L +ER+ + L H +P F + +CS +
Sbjct: 385 LLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHCSMW 443
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
F+GL + + +DI+ V + ++ K GM I V HV +R+L +V P
Sbjct: 444 FIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPS 503
Query: 486 GVRPSRPSKGTWDSRRALERKVSSHT----KPGADDGRKRKQTDDNVDTHLRNAKCH-AT 540
++ R GT + +S + PG RKR +D N DT ++ K +
Sbjct: 504 LLKRERKVSGTVHKNGNIAGNGNSGSVSPRNPGNTTNRKR-LSDQNQDTSIKKRKVNDGE 562
Query: 541 MPSSSGEFREGSPIMSTISSSS 562
PS + +GS ++ + S
Sbjct: 563 QPSVTHHGEDGSLVVQSCGEDS 584
>gi|328792143|ref|XP_393202.3| PREDICTED: poly(A) polymerase gamma [Apis mellifera]
Length = 619
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/562 (42%), Positives = 340/562 (60%), Gaps = 13/562 (2%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T IS+A P D RT +L++ L+ N++ES+EE R E+L +L+ +VK W++
Sbjct: 28 LGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDT 87
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S A+ + + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F ++L
Sbjct: 88 SVARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFTSFFELLK 146
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D++ V
Sbjct: 147 MQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCV 206
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR CQ
Sbjct: 207 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQ 266
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPIITP
Sbjct: 267 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITP 326
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK+Y+
Sbjct: 327 AYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYKHYIV 384
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYCS-Y 425
+ + A+D W G VES++R L +ER+ + L H +P F + +CS +
Sbjct: 385 LLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHCSMW 443
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
F+GL + + +DI+ V + ++ K GM I V HV +R+L +V P
Sbjct: 444 FIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPS 503
Query: 486 GVRPSRPSKGTWDSRRALERKVSSHT----KPGADDGRKRKQTDDNVDTHLRNAKCH-AT 540
++ R GT + +S + PG RKR +D N D ++ K +
Sbjct: 504 LLKRERKVSGTVHKNGNIAGNGNSGSVSPRNPGNTTNRKR-LSDQNQDASIKKRKVNDGE 562
Query: 541 MPSSSGEFREGSPIMSTISSSS 562
PS + +GS ++ + S
Sbjct: 563 QPSVTHHGEDGSLVVQSCGEDS 584
>gi|290990211|ref|XP_002677730.1| predicted protein [Naegleria gruberi]
gi|284091339|gb|EFC44986.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 313/475 (65%), Gaps = 16/475 (3%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGL 74
IS A PT DL + + + L+ N + S EE REEVL +LD I+K WVK++ +GL
Sbjct: 7 ISAALPTQKDLTNSEAIMEILKKENRFPSDEENKKREEVLAKLDGIIKGWVKQVCLKQGL 66
Query: 75 NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVT 134
+++ + A +K+ TFGS+RLGVHGPGADIDTLC+ P + + F +LH +L PE+
Sbjct: 67 SEEFVSSAGSKLVTFGSFRLGVHGPGADIDTLCIVP-NMVEKHHCFTDLHDILKLRPEIA 125
Query: 135 ELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGC 194
EL PVPDA+VP++ F GV IDLL+ARLS VIP DLDI +S L++AD++T RSLNG
Sbjct: 126 ELKPVPDAYVPLITMVFDGVEIDLLFARLSRTVIPADLDILDESNLKDADDETQRSLNGP 185
Query: 195 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 254
RV DQIL+LVP +NFRTTLRC++ WA RR +Y N+ G+LGG+ +A+L A+ICQ+YPNA
Sbjct: 186 RVADQILKLVPNQENFRTTLRCIKLWATRRAIYGNIVGYLGGVAYAILTAKICQMYPNAA 245
Query: 255 PSMLVSRFFRVYTQWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 313
PS L+++FF VY QW W PVLL IEEG+L +VW+P+ NP+DK HLMPIITP+YPCM
Sbjct: 246 PSTLLTKFFTVYQQWNWGKVPVLLRPIEEGTLNFKVWNPKLNPRDKQHLMPIITPSYPCM 305
Query: 314 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA 373
NS++NVS +TL+ M +EF+RG I + E +W+TLFE FF Y NYL+++I+
Sbjct: 306 NSTFNVSKTTLKDMKNEFERGASITQKAENGLE--NWETLFEATDFFVRYSNYLQVEINT 363
Query: 374 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF-MGLQRK 432
N D W G+++S++R L K+E L H +P F + + SYF +GL+ K
Sbjct: 364 SNEVDHLKWIGFIQSKVRFLIPKLE--AVPGLTIHIYPDYFHNNQGGAFSSYFYIGLEYK 421
Query: 433 QGVPVGEGEQFDIRLTVKEFKQAVSM----YTLRKPGMQISVAHVTRRNLPNFVF 483
Q P GEG ++ + EF++ ++ + KP +Q + R +P FV
Sbjct: 422 QTKP-GEGSVVNLASCIAEFEELLTWPDKNENMEKPKIQ----PIKRNAIPEFVI 471
>gi|41054866|ref|NP_956915.1| poly(A) polymerase gamma [Danio rerio]
gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamma [Danio rerio]
Length = 744
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/502 (45%), Positives = 321/502 (63%), Gaps = 12/502 (2%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G + GIT ISLA P + D + T+KL + ++ ++E ++E R VLG+L+ V
Sbjct: 14 GQQPRKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFV 73
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K W+ +IS +K L + KIFTFGSYRLGVH GADID LCV PRH R DFF
Sbjct: 74 KEWISEISESKNLPPSAVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFS 132
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
+ L E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DS+L+
Sbjct: 133 SFFEKLKRHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLR 192
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D + +RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAM 252
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YH
Sbjct: 253 LVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYH 312
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS+YNVSTST IM +EF+ G + + + + +A DW LFEP FF+
Sbjct: 313 LMPIITPAYPQQNSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKA--DWSKLFEPPNFFQ 370
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKS 418
Y++Y+ + SA ++ W G VES++R L +ER+ Y + +P PG +++
Sbjct: 371 QYRHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRN 430
Query: 419 KPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 473
+ + S +F+G+ K+ + + D+ ++ F V S + K GM I HV
Sbjct: 431 ENDFVSMWFIGISFKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHV 489
Query: 474 TRRNLPNFVFPGGVRPSRPSKG 495
++ L +++ P V+ + S G
Sbjct: 490 KKKQLHHYLPPELVQRKKKSLG 511
>gi|307201288|gb|EFN81136.1| Poly(A) polymerase gamma [Harpegnathos saltator]
Length = 609
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/575 (41%), Positives = 346/575 (60%), Gaps = 24/575 (4%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N + LG+T IS+A P D+ RT +L++ L+ N++ES+EE R E+L +L+ +VK W
Sbjct: 19 NLRTLGMTSAISVAEPKPLDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQW 78
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
++ S A+ + + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F
Sbjct: 79 IRDTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFNSFF 137
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D
Sbjct: 138 ELLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLD 197
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVA
Sbjct: 198 QKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVA 257
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
R CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMP
Sbjct: 258 RTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMP 317
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITPAYP NS++NVS ST IM + F+ G I E + +A +WD LFEP FF YK
Sbjct: 318 IITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--NWDKLFEPPNFFSKYK 375
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPHPGDFSDKSKPLYC 423
+Y+ + + A+D W G VES++R L +ER+ + N+ +P D +C
Sbjct: 376 HYIVLLARSSTAEDQLEWCGLVESKIRHLIGTLERNPHINLAHVNPEAFPPLDPEPDKHC 435
Query: 424 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 482
S +F+GL + + +DI+ V+ ++ + K GM I HV R++L +V
Sbjct: 436 SMWFIGLLFAKSENLNIDLTYDIKSFVETIERQAEQINMLKEGMWIEAKHVKRKDLHTYV 495
Query: 483 FPGGVRPSRPSKGTWDSRRALERKVSSHT----KPGADDGRKRKQTDDNVDTHLRNAKCH 538
P ++ R G ++ +S + PG GRKR +D +D
Sbjct: 496 SPSLLKKERKVSGGVHRNGSIAGNGNSGSVSPRNPGDTTGRKR-LSDQGID--------- 545
Query: 539 ATMPSSSGEFREGSPIMSTISSSSINLQFEHMDAN 573
+ G+ R + + + +SSI +Q D+N
Sbjct: 546 -----ACGKKRRVNEVEEQVENSSIVVQSCGEDSN 575
>gi|410900416|ref|XP_003963692.1| PREDICTED: poly(A) polymerase gamma-like [Takifugu rubripes]
Length = 861
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/492 (46%), Positives = 317/492 (64%), Gaps = 15/492 (3%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G + + GIT ISLA P + D T+KL ++ ++E +EE R VLG+L+ V
Sbjct: 11 GQQSQKHYGITSAISLAPPREIDHHYTKKLCDAMQPFGVFEDEEELNHRLAVLGKLNNFV 70
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K W+ +IS K L + KIFTFGSYRLGVH GADID LCV PRH R DFF
Sbjct: 71 KEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFQ 129
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
+ L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DSIL+
Sbjct: 130 SFFEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALPSIPDNLDLRGDSILK 189
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D + +RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+
Sbjct: 190 NLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAM 249
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YH
Sbjct: 250 LVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYH 309
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS+YNVSTST IM +EF+ G + + + + +A +W LFEP FF+
Sbjct: 310 LMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKA--EWSKLFEPPHFFQ 367
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKS 418
YK+Y+ + SA ++ W G VES++R L +ER+ Y + +P PG +++
Sbjct: 368 KYKHYIVLAASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRN 427
Query: 419 KPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAH 472
+ + S +F+G+ K+ + E D+ ++ F +QA ++ L+ GM+I H
Sbjct: 428 ENDFVSMWFIGIIFKK-MENAESVNIDLTYDIQSFTDTVYRQANNINMLKN-GMKIEATH 485
Query: 473 VTRRNLPNFVFP 484
V ++ L N P
Sbjct: 486 VKKKQL-NLYLP 496
>gi|383862407|ref|XP_003706675.1| PREDICTED: poly(A) polymerase gamma [Megachile rotundata]
Length = 616
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/531 (43%), Positives = 328/531 (61%), Gaps = 10/531 (1%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N + LG+T IS+A P DL RT +L++ L+ N++ES+EE R E+L +L+ +VK W
Sbjct: 23 NLRTLGMTSAISVAEPKPSDLTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQW 82
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
++ S A+ + + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F
Sbjct: 83 IRDTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFSSFF 141
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
+L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D
Sbjct: 142 DLLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLD 201
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVA
Sbjct: 202 QKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVA 261
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
R CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMP
Sbjct: 262 RTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMP 321
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK
Sbjct: 322 IITPAYPQQNSTFNVSVSTRTIMQEAFETGLSITEEIIMGKA--TWDKLFEPPNFFGKYK 379
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLY 422
+Y+ + + +A+D W G VES++R L +ER+ + L H +P F + +
Sbjct: 380 HYIVLLARSLSAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPEGH 438
Query: 423 CS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
CS +F+GL + + +DI+ V ++ ++ K GM I HV R++L +
Sbjct: 439 CSMWFIGLLFAKSENLNVDLTYDIKSFVDSIQRQAEQLSVLKEGMWIEAKHVKRKDLHTY 498
Query: 482 VFPGGVRPSRPSKGT---WDSRRALERKVSSHTKPGADDGRKRKQTDDNVD 529
V P +R R G+ + S + AD +++ +D N D
Sbjct: 499 VSPSLLRRERKVSGSVHKNGNIAGNGNNGSVSPRNQADAANRKRGSDQNAD 549
>gi|403415037|emb|CCM01737.1| predicted protein [Fibroporia radiculosa]
Length = 626
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/558 (42%), Positives = 336/558 (60%), Gaps = 44/558 (7%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M ++NG LG+T PIS + D + T L + LR +E++EEA +RE VLGRL +
Sbjct: 1 MSTTNGA-LGVTPPISTSESNDREKEVTTTLMEELRRQGTFETEEEAKTREIVLGRLAAV 59
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK +V+++S A G+++ A KIFTFGSYRLGVHGPG+DIDTLCV P+H TRE DFF
Sbjct: 60 VKKFVRRVSLANGMSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRE-DFF 118
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
L +ML E VTE+ VP+A+VP++K K +G+ IDL ARL+L IP+DL + D++L
Sbjct: 119 DVLEEMLKETEGVTEVSGVPEAYVPIIKTKINGIPIDLTMARLALSSIPDDLSLQDDNLL 178
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N DE+ VRSLNG RVTD+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 179 RNLDERCVRSLNGSRVTDEILRLVPNVTVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWA 238
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVARICQLYPNA+ +VSRFF + QW WP PVLL IEEG L ++VW+P+ P D+
Sbjct: 239 MLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLPVRVWNPKLYPADRA 298
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M +++NV+ ST IM +EF++G EI + + A +W LF FF
Sbjct: 299 HRMPIITPAYPSMCATHNVTASTQMIMTEEFKKGSEIVDKVIVGTA--EWSELFAKHDFF 356
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 420
++ YL++ S N+D W G VESR+RQL +K+E + +++ HP F S
Sbjct: 357 HKHRYYLQVIASTGNSDLQIKWSGTVESRIRQLVMKLE-YVESLILAHPFIKGFEQVSHC 415
Query: 421 L-----------------------------------YCSYFMGLQRKQGVPVGEG-EQFD 444
+ ++++GL + +P G + D
Sbjct: 416 ISSEEVRAVAQGEVSEAVSKRRKEDIEGKEGASTVYSTTFYIGLLIEPKLPGSSGPRKLD 475
Query: 445 IRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 503
I EF + V M+ + M I V H+ LP++V+ G R R ++ S +
Sbjct: 476 ISYPTTEFTKLVKMWEKYDEAKMGIIVRHIKSTALPDYVYDEGERQPRSAQKRVKSGKGS 535
Query: 504 ERKVSSHTKPGADDGRKR 521
++ S+ T P + ++R
Sbjct: 536 DK--SNGTSPDMPNKKRR 551
>gi|170031421|ref|XP_001843584.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
gi|167869844|gb|EDS33227.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
Length = 661
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/498 (44%), Positives = 324/498 (65%), Gaps = 22/498 (4%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T ISLA P +D +T +L+K L N++E + E R E+L +L+ +VK WV+ +
Sbjct: 32 LGMTSAISLAEPKPEDHTKTVELQKALEPYNVFEDESELNHRMEILSKLNTLVKQWVRDV 91
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S +K + + L ++ KI+TFGSYRLGVH GADID LCV PR+ R+ D+FG ++L
Sbjct: 92 SISKNMPEALAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERQ-DYFGSFFELLK 150
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+ PEVTE V +A VPV+K F G+ IDLL+ARL+L IP++ D+ D +L+N D ++V
Sbjct: 151 KQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDPKSV 210
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRVTD+ILRLVP I NFR LR ++ WAK+ G+YSN G+ GG++WA+LVAR CQ
Sbjct: 211 RSLNGCRVTDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQ 270
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNAV + LV +FF V+++W+WP PVLL + +LG QVWDPR N +D++HLMPIITP
Sbjct: 271 LYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITP 330
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP NS++NVS+ST ++M++EF RG +I + + +A WD LFE +FF Y++++
Sbjct: 331 AYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLGKA--GWDKLFEAPSFFFKYRHFIV 388
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHP---------HPGDFSDKS 418
+ +++ NADD W G VES++R L +ER+ + N+ +P D +
Sbjct: 389 LLVTSNNADDHLEWCGLVESKIRYLIQNLERNLHINLAHVNPKCFEQQEQNQKDDGGEGG 448
Query: 419 KPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHV 473
K CS +F+GL+ ++ E D+ +++ F AV + + K GM+I HV
Sbjct: 449 KTTLCSLWFIGLEFER----SENLNVDLTESIQNFTDAVHKHAVHIKVLKDGMKIEARHV 504
Query: 474 TRRNLPNFVFPGGVRPSR 491
R+ L ++ P ++ R
Sbjct: 505 RRKQLNQYLDPNLLKRER 522
>gi|260803790|ref|XP_002596772.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
gi|229282032|gb|EEN52784.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
Length = 493
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/484 (47%), Positives = 317/484 (65%), Gaps = 18/484 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISL+ PT D+ KL L+ N+++++E R VLG+L+++VK W+K++S
Sbjct: 8 GITSPISLSEPTKFDIDLNVKLVNTLKPYNVFDTEEGLTHRMVVLGKLNKLVKEWIKQVS 67
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
AK + + + KI+TFGSYRLGVHG GADIDTLCV PRH R DFF +++L +
Sbjct: 68 LAKNMPPAIAETVGGKIYTFGSYRLGVHGAGADIDTLCVAPRHVDRS-DFFSSFYEILKD 126
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
E T++ V +A VPV+K F GV +D+L+ARL+L +PED D+ ++ +L+N D++ VR
Sbjct: 127 QKETTDIRGVEEAFVPVIKLDFDGVELDILFARLALPQVPEDQDLREEVLLKNLDQRCVR 186
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD++L LVP +NFR LR ++ WAKRRGVYSNV GFLGG++WA+LVAR CQL
Sbjct: 187 SLNGCRVTDEMLHLVPNRENFRLALRAIKLWAKRRGVYSNVLGFLGGVSWAMLVARTCQL 246
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMPIITP 308
YPNA+ S L+ +FF V+++W WP PVLL I+E + LG QVWDPR NP D++HLMPIITP
Sbjct: 247 YPNAIASTLIHKFFLVFSRWEWPQPVLLKQIDENNRLGFQVWDPRTNPMDRFHLMPIITP 306
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP NS+YNVS ST IM +EF+ G ++ + E E WD LFEP +FF YK+Y+
Sbjct: 307 AYPQQNSTYNVSLSTRAIMQEEFKIGLQVTQ--EIFEGKATWDKLFEPGSFFGKYKHYIV 364
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---SDKSKPLYCSY 425
+ SA + + W G VES++R L +ER Y L H +P + + + ++
Sbjct: 365 LSTSATSKEHHLEWVGLVESKVRILIGNLERTAYIAL-AHVNPKQYPPLNPQEDVFVTNW 423
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPN 480
F+GLQ + EG D+ ++ F +QA+S TL K GM+I V R+ L
Sbjct: 424 FIGLQFNK----IEGGNIDLTFEIQSFTDTVHRQAISNGTL-KEGMKIEARSVRRKQLGE 478
Query: 481 FVFP 484
++ P
Sbjct: 479 YLPP 482
>gi|427788767|gb|JAA59835.1| Putative polya polymerase [Rhipicephalus pulchellus]
Length = 817
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/489 (46%), Positives = 309/489 (63%), Gaps = 12/489 (2%)
Query: 1 MGSSNG---QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRL 57
+GS+ G + LG+T IS A P DL RT +LE+ LR L+ES+EE R EVL ++
Sbjct: 29 IGSATGIVDKTLGMTSAISTAPPKPSDLQRTDELEETLRQFGLFESEEELAHRMEVLSKI 88
Query: 58 DQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREE 117
+Q+VK W+ ++S K + + + KI+TFGSYRLGVH GADIDTLCV PRH R
Sbjct: 89 NQLVKKWIYEVSIKKNMPSSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHIERS- 147
Query: 118 DFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
DFF ++L + EV +L V +A VPV+K F G+ +D+L+ARL+L IPED D+
Sbjct: 148 DFFASFVELLRQQEEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLRDV 207
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+IL+N D++ VRSLNGCRVTD+IL LVP + FR LR ++ WAKR GVYSNV G+LGG+
Sbjct: 208 NILKNLDQKCVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGGV 267
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
+WA+LVAR CQLYPNA + LV +FF V++QW WP PVLL EE LG VWDPR N
Sbjct: 268 SWAMLVARTCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVA 327
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP NS++NVS STL IM EF++G I + + + DW LFEP
Sbjct: 328 DRFHLMPIITPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRS--DWMKLFEPP 385
Query: 358 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
FF YK+++ + S ++ + W G VES++R L +ERH Y + H +P F
Sbjct: 386 NFFGKYKHFIVLMASTQSKEHHLEWYGLVESKIRILISNLERHPYIAI-AHVNPESFP-P 443
Query: 418 SKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHV 473
S+P L +F+GLQ + V +D R V K+ + + K M++ + +V
Sbjct: 444 SEPEGDKLQSMWFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYV 503
Query: 474 TRRNLPNFV 482
RR L ++
Sbjct: 504 RRRELVRYL 512
>gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/489 (46%), Positives = 314/489 (64%), Gaps = 12/489 (2%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G + GIT ISLA P + D + T+KL + ++ ++E ++E R VLG+L+ V
Sbjct: 14 GQQPRKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFV 73
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K W+ +IS +K L + KIFTFGSYRLGVH GADID LCV PRH R DFF
Sbjct: 74 KEWIAEISDSKNLPPSSVTNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHIERT-DFFS 132
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
+ L E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DS+L+
Sbjct: 133 SFFEKLKRHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLR 192
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D + +RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAM 252
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YH
Sbjct: 253 LVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYH 312
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS+YNVSTST IM +EF+ G + + + + +A DW LFEP FF+
Sbjct: 313 LMPIITPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKA--DWSKLFEPPNFFQ 370
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKS 418
YK+Y+ + SA ++ W G VES++R L +ER+ Y + +P PG + +
Sbjct: 371 KYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENHN 430
Query: 419 KPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 473
+ + S +F+G+ K+ + + D+ ++ F V S + K GM I HV
Sbjct: 431 ENEFVSMWFIGISFKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHV 489
Query: 474 TRRNLPNFV 482
++ L +++
Sbjct: 490 KKKQLHHYL 498
>gi|347969786|ref|XP_003436462.1| AGAP013207-PA [Anopheles gambiae str. PEST]
gi|333469270|gb|EGK97235.1| AGAP013207-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/500 (44%), Positives = 329/500 (65%), Gaps = 24/500 (4%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T IS A P +D+ +T++LEK L N++E++EE R E+L +L+ +VK WV+ +
Sbjct: 22 LGMTSAISTAEPKPEDIQKTKELEKSLEPFNVFEAEEELNHRMEILAKLNTLVKQWVRDV 81
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S +K + + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+FG ++L
Sbjct: 82 SISKNMPEAMAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFGSFFELLK 140
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+ PEVTE V +A VPV+K F G+ IDLL+ARL+L IP++ D+ D +L+N D+++V
Sbjct: 141 QQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDQKSV 200
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRVTD+ILRLVP I NFR LR ++ WAKR G+YSN G+ GG++WA+LVAR CQ
Sbjct: 201 RSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRHGIYSNSLGYFGGVSWAMLVARTCQ 260
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNAV + LV +FF V+++W+WP PVLL + +LG QVWDPR N +D++HLMPIITP
Sbjct: 261 LYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITP 320
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP NS++NVS+ST ++M+ EF RG +I + + + W+ LFE +FF Y++++
Sbjct: 321 AYPQQNSTFNVSSSTRKVMLMEFNRGMQITDDIMMGKQ--MWEKLFEAPSFFYRYRHFIV 378
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPHPGDFSDKS--------- 418
+ +++ NADD W G VES++R L +ER+ + N+ +P + +++
Sbjct: 379 LLVTSSNADDHLEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQHEQNSATTLNGAD 438
Query: 419 -KPL-YCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT----LRKPGMQISVA 471
KP +CS +F+GL+ ++ E D+ +++ F +V + L K GM+I
Sbjct: 439 GKPTPFCSLWFIGLEFER----SENLNVDLTESIQSFTDSVHKHAVHIKLLKDGMKIEAR 494
Query: 472 HVTRRNLPNFVFPGGVRPSR 491
HV R+ L ++ P ++ R
Sbjct: 495 HVRRKQLTQYLDPNLLKRER 514
>gi|294460282|gb|ADE75723.1| unknown [Picea sitchensis]
Length = 554
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 314/488 (64%), Gaps = 23/488 (4%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGL 74
+ L PTD D+ RT LEK+ D L +++E R VL +L+QIVK W ++++ +GL
Sbjct: 47 VFLDSPTDIDIARTHALEKFQIDAELILTEKEEAKRRSVLAQLEQIVKRWARRVTWQRGL 106
Query: 75 NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVT 134
L + +NAKIFTFGSY+LGVHGP ADID LCVGP +AT E+DFF L+ ML + EV+
Sbjct: 107 PKDLKESSNAKIFTFGSYQLGVHGPEADIDALCVGPCYATLEDDFFIVLYNMLKKTAEVS 166
Query: 135 ELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGC 194
E+ V A+VP+M+FKFSG+SIDLLYARLSL IPED+DI + +L+N D+ TV+SLNGC
Sbjct: 167 EVQCVKSANVPLMRFKFSGISIDLLYARLSLRTIPEDMDILDEKLLENLDDTTVKSLNGC 226
Query: 195 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 254
RVT +IL+LVPKI+NFR+TLRC++FWAKRRG+YS++ GFLGGI+WA+LVAR+CQ++PNA
Sbjct: 227 RVTARILQLVPKIENFRSTLRCIKFWAKRRGIYSHIFGFLGGIHWAVLVARVCQMFPNAT 286
Query: 255 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMN 314
SMLVSRFF +Y W+WP PV L + + D++H MPII P +P
Sbjct: 287 VSMLVSRFFWIYAHWQWPTPVTLVETQPD---------HADGSDRHHHMPIIIPVHPYSC 337
Query: 315 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV----DWDTLFEPFTFFEAYKNYLRID 370
SYNV+ STL+ + EF RG + ME + DW+ LFE F F +Y+ +++I
Sbjct: 338 CSYNVTRSTLQKLKSEFSRGWDAIMKMETKWGTLPNSGDWNILFERFPFCSSYEYFIQIY 397
Query: 371 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFMGL 429
++A + DD R+W+GWVESR R L LK E+ C P+P + DK+ K +C + GL
Sbjct: 398 VTASDEDDFRSWRGWVESRFRHLLLKFEKLP---AYCDPNPYPYFDKNVKEPHCYFLWGL 454
Query: 430 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 489
+ ++ + V + D EF+ +S +PG + + + R LP+F
Sbjct: 455 KLRKNISVDMADLED------EFRLYLSNGYEGRPGCDVHLTLLNRFQLPSFANSKSSEL 508
Query: 490 SRPSKGTW 497
+ SK W
Sbjct: 509 RQHSKPYW 516
>gi|307183537|gb|EFN70300.1| Poly(A) polymerase gamma [Camponotus floridanus]
Length = 603
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/495 (45%), Positives = 317/495 (64%), Gaps = 7/495 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
+N + LG+T IS+A P D+ RT +L++ L+ N++ES+EE R E+L +L+ +VK
Sbjct: 22 NNLRTLGMTSAISVAEPKPIDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQ 81
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
W++ S A+ + + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F
Sbjct: 82 WIRDTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFATF 140
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
++L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N
Sbjct: 141 FELLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLKDDMLLKNL 200
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LV
Sbjct: 201 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLV 260
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
AR CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLM
Sbjct: 261 ARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLM 320
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PIITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF Y
Sbjct: 321 PIITPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIIGKA--TWDKLFEPPNFFGKY 378
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPL 421
K+Y+ + + +A+D W G VES++R L +ER+ + L H +P F D
Sbjct: 379 KHYIVLLARSSSAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLDPEPGK 437
Query: 422 YCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 480
+CS +F+GL + + +DI+ V+ ++ ++ K GM I HV R++L
Sbjct: 438 HCSMWFIGLSFAKSESLNIDLTYDIKSFVETIERQAEQISMLKEGMWIEAKHVKRKDLHT 497
Query: 481 FVFPGGVRPSRPSKG 495
+V V+ R G
Sbjct: 498 YVSSSLVKRERKVSG 512
>gi|195124015|ref|XP_002006489.1| GI18544 [Drosophila mojavensis]
gi|193911557|gb|EDW10424.1| GI18544 [Drosophila mojavensis]
Length = 664
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/520 (44%), Positives = 322/520 (61%), Gaps = 41/520 (7%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++LGIT ISLA P +DL RT +L K L N++E+QEE R E+L +L+ +VK WVK
Sbjct: 26 KQLGITSAISLAEPRAEDLQRTEELSKSLEPYNVFETQEELNHRMEILAKLNTLVKQWVK 85
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
IS +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F ++
Sbjct: 86 DISVSKNMPEAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERS-DYFQSFFEI 144
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + PEVTE V +A VPV+K F GV IDLL+ARLSL IP+D D+ D++L+N D +
Sbjct: 145 LKKQPEVTECRSVEEAFVPVIKMNFDGVEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPR 204
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+VRSLNGCRVTD+IL LVP I+NFR LR ++ WAKR G+YSN G+ GG+ WA+LVAR
Sbjct: 205 SVRSLNGCRVTDEILALVPNIENFRLALRAIKLWAKRHGIYSNSLGYFGGVTWAMLVART 264
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA + LV +FF V+++W+WPNPVLL ++ +L QVWDPR N D+YHLMPII
Sbjct: 265 CQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHLDNVNLRFQVWDPRVNASDRYHLMPII 324
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS++NVS ST ++++ EF RG I + E V WD LFE +FF Y+++
Sbjct: 325 TPAYPQQNSTFNVSESTKKVILTEFNRGMSITD--EIMLGRVGWDRLFEAPSFFYRYRHF 382
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------- 417
+ + ++++ ADD W G VES++R L +ER + +L H +P F K
Sbjct: 383 IVLLVNSQTADDHLEWCGLVESKVRLLIGNLERIPHIVL-AHVNPKCFELKKGAATANNS 441
Query: 418 -------------------SKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 457
+ YCS +F+GL+ ++ E D+ +++ F + V+
Sbjct: 442 QNNSGNEDDLKQQSAQAAVTTAPYCSLWFIGLEFER----SENLNIDLTESIQNFTEHVN 497
Query: 458 MY----TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 493
M+ + K GM I HV R+ L ++ ++ R S
Sbjct: 498 MHGVNIKMLKEGMSIVARHVKRKQLSVYLDADFLKRERKS 537
>gi|427797219|gb|JAA64061.1| Putative polya polymerase, partial [Rhipicephalus pulchellus]
Length = 759
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/489 (46%), Positives = 309/489 (63%), Gaps = 12/489 (2%)
Query: 1 MGSSNG---QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRL 57
+GS+ G + LG+T IS A P DL RT +LE+ LR L+ES+EE R EVL ++
Sbjct: 80 IGSATGIVDKTLGMTSAISTAPPKPSDLQRTDELEETLRQFGLFESEEELAHRMEVLSKI 139
Query: 58 DQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREE 117
+Q+VK W+ ++S K + + + KI+TFGSYRLGVH GADIDTLCV PRH R
Sbjct: 140 NQLVKKWIYEVSIKKNMPSSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHIERS- 198
Query: 118 DFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
DFF ++L + EV +L V +A VPV+K F G+ +D+L+ARL+L IPED D+
Sbjct: 199 DFFASFVELLRQQEEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLRDV 258
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+IL+N D++ VRSLNGCRVTD+IL LVP + FR LR ++ WAKR GVYSNV G+LGG+
Sbjct: 259 NILKNLDQKCVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGGV 318
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
+WA+LVAR CQLYPNA + LV +FF V++QW WP PVLL EE LG VWDPR N
Sbjct: 319 SWAMLVARTCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVA 378
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP NS++NVS STL IM EF++G I + + + DW LFEP
Sbjct: 379 DRFHLMPIITPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRS--DWMKLFEPP 436
Query: 358 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
FF YK+++ + S ++ + W G VES++R L +ERH Y + H +P F
Sbjct: 437 NFFGKYKHFIVLMASTQSKEHHLEWYGLVESKIRILISNLERHPYIAI-AHVNPESFP-P 494
Query: 418 SKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHV 473
S+P L +F+GLQ + V +D R V K+ + + K M++ + +V
Sbjct: 495 SEPEGDKLQSMWFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYV 554
Query: 474 TRRNLPNFV 482
RR L ++
Sbjct: 555 RRRELVRYL 563
>gi|328853642|gb|EGG02779.1| hypothetical protein MELLADRAFT_38417 [Melampsora larici-populina
98AG31]
Length = 529
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/513 (46%), Positives = 317/513 (61%), Gaps = 47/513 (9%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS+ GPT + + T L L++ +ES EEA +RE VLGRL+ +VK +V K+S
Sbjct: 4 GVTGPISINGPTRAEELSTTALMDELKERRTFESPEEARARELVLGRLNLLVKEFVIKVS 63
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
A G++D + +E KIFTFGSYRLGVHGPG+DIDTLCV PR TRE FF L QML E
Sbjct: 64 LALGMSDHVARETGGKIFTFGSYRLGVHGPGSDIDTLCVVPRQVTREH-FFEILPQMLKE 122
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
PEVTEL VP+A VP++ KFSG+ +DLL+ARL+L +P+DL++ D++L+N D++ VR
Sbjct: 123 RPEVTELSTVPEAFVPIISLKFSGIEVDLLFARLALPSVPDDLELKDDALLKNLDDRCVR 182
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SL G RVTD+ILRLVP ++ FR +LR ++ WAK R VYSNV GF GG+ WA+ AR+CQL
Sbjct: 183 SLGGSRVTDEILRLVPDVEVFRHSLRAIKLWAKNRAVYSNVMGFCGGVAWAMCTARVCQL 242
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIIT 307
YPN + +V+RFF V +QW WP+PVLL AI G +G Q VW+P+ P+D+ H MPIIT
Sbjct: 243 YPNKPAATIVNRFFAVLSQWNWPSPVLLKAIGSGPIGDQRRVWNPKIYPQDRGHRMPIIT 302
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
PAYPCM S++NV+ ST ++MM EF+RG + +A+ A W LFE FF Y+NY+
Sbjct: 303 PAYPCMCSTHNVTKSTAQVMMTEFKRGLAVTDAIATGSA--QWSALFEKHDFFTRYRNYI 360
Query: 368 RIDISAENADDLRNWKGWVESRLRQLTLKIER-HTYNMLQCHPHPGDFSDKSKPL----- 421
+I S+ AD W G VESRLR L LK+E T +M HP FS+ + L
Sbjct: 361 QITASSPEADAHLKWAGTVESRLRLLVLKVEEIETVDM--AHPFIKGFSNTTYALNRQEV 418
Query: 422 ------------------------------YCSYFMGLQRKQGVPVGE--GEQFDIRLTV 449
CS+F+GL PVG + DI V
Sbjct: 419 SLVQGGDMPNEIASRIPEDYENRADVEVVHTCSFFVGLLVHPK-PVGHVGPRKLDITYPV 477
Query: 450 KEFKQAVSMYT-LRKPGMQISVAHVTRRNLPNF 481
EF + V + + M ISV H+ + P+F
Sbjct: 478 GEFTRMVKQWEGYSEDKMSISVRHIKKSVYPSF 510
>gi|340709674|ref|XP_003393427.1| PREDICTED: poly(A) polymerase gamma-like [Bombus terrestris]
Length = 617
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/494 (45%), Positives = 313/494 (63%), Gaps = 7/494 (1%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N + LG+T IS+A P D RT +L++ L+ N++ES+ E R E+L +L+ +VK W
Sbjct: 24 NLRTLGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEAELNHRMEILSKLNTLVKQW 83
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
++ S A+ + + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F
Sbjct: 84 IRDTSIARNMPSSVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFASFF 142
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L EVT+L V +A VPV+K F G+ ID+L+A+LSL IP+ +D+ D +L+N D
Sbjct: 143 ELLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLD 202
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVA
Sbjct: 203 QKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVA 262
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
R CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMP
Sbjct: 263 RTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMP 322
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK
Sbjct: 323 IITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYK 380
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-KSKPL-Y 422
+Y+ + + A+D W G VES++R L +ER+ + L H +P F K +P +
Sbjct: 381 HYIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGH 439
Query: 423 CS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
CS +F+GL + + +DI+ V + L K GM I HV R++L +
Sbjct: 440 CSMWFIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTY 499
Query: 482 VFPGGVRPSRPSKG 495
V P ++ R G
Sbjct: 500 VSPSLLKRERKISG 513
>gi|350422462|ref|XP_003493171.1| PREDICTED: poly(A) polymerase gamma-like [Bombus impatiens]
Length = 610
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/494 (45%), Positives = 312/494 (63%), Gaps = 7/494 (1%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N + LG+T IS+A P D RT +L++ L+ N++ES+ E R E+L +L+ +VK W
Sbjct: 20 NLRTLGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEAELNHRMEILSKLNTLVKQW 79
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
++ S A+ + + + KI+TFGSYRLGVH GADID LCV PRH R D+F
Sbjct: 80 IRDTSIARNMPSSVADQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFASFF 138
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L EVT+L V +A VPV+K F G+ ID+L+A+LSL IP+ +D+ D +L+N D
Sbjct: 139 ELLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLD 198
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVA
Sbjct: 199 QKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVA 258
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
R CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMP
Sbjct: 259 RTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMP 318
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK
Sbjct: 319 IITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYK 376
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-KSKPL-Y 422
+Y+ + + A+D W G VES++R L +ER+ + L H +P F K +P +
Sbjct: 377 HYIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGH 435
Query: 423 CS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
CS +F+GL + + +DI+ V + L K GM I HV R++L +
Sbjct: 436 CSMWFIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTY 495
Query: 482 VFPGGVRPSRPSKG 495
V P ++ R G
Sbjct: 496 VSPSLLKRERKISG 509
>gi|393215900|gb|EJD01391.1| poly polymerase [Fomitiporia mediterranea MF3/22]
Length = 629
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/531 (44%), Positives = 320/531 (60%), Gaps = 48/531 (9%)
Query: 1 MGSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
M S+NGQ+ G+T+PIS + TD + T + LR +ES+EEA +RE VLGR+
Sbjct: 1 MTSTNGQQQWGVTQPISSSESTDAEKKVTVAMMDELRRQGTFESEEEARTRELVLGRVAT 60
Query: 60 IVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF 119
+VK +V K++ ++GL++ A KIFTFGSYRLGVHGPG+DIDTLCV P+H +RE DF
Sbjct: 61 LVKKFVHKVALSRGLSESAAAAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DF 119
Query: 120 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 179
F ML E+ V+E+ VP+A+VP++K K G+ ID L ARL+L IP+DL + D++
Sbjct: 120 FEVFEPMLREVEGVSEVSGVPEAYVPIIKIKIQGIPIDFLMARLALSSIPDDLSLRDDNL 179
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+N DE+ +RSLNG RVTD+ILRLVP + FR LRC++ WA+RR +YSNV GFLGG+ W
Sbjct: 180 LKNLDERCIRSLNGSRVTDEILRLVPNVAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAW 239
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
A+LVARICQLYPNAV +VSRFF + QW WP PVLL IEEG L ++VW+PR P D+
Sbjct: 240 AMLVARICQLYPNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPRLYPGDR 299
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
H MPIITPAYP M +++NV+ ST IM +EF+RG +I + + + W LF F
Sbjct: 300 SHRMPIITPAYPAMCATHNVTESTQMIMTEEFKRGADIVDKIVF--GSLQWSALFAKHDF 357
Query: 360 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK 419
F Y+ YL+I S N D W G VESR+RQL +K+E + + HP F +
Sbjct: 358 FHKYRYYLQIIASTGNPDLQIKWAGTVESRIRQLVMKLE-YVDALTLAHPFIKGF---DQ 413
Query: 420 PLYC--------------------------------------SYFMGLQRKQGVPVGEG- 440
L+C ++F+GL + P G
Sbjct: 414 TLHCLNDEEVRLCASGEVPEAVLRRKKEEAEGKEGASTVHTTTFFIGLAIEPKQPGSTGP 473
Query: 441 EQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPS 490
+ DI EF + V M+ + M I V H+ +LP++VF G +P+
Sbjct: 474 RRLDISYPTTEFTKLVKMWDKYDESSMGIVVRHIKNSSLPDYVFEEGAKPN 524
>gi|354473991|ref|XP_003499215.1| PREDICTED: poly(A) polymerase gamma [Cricetulus griseus]
Length = 739
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/492 (45%), Positives = 314/492 (63%), Gaps = 15/492 (3%)
Query: 1 MGSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
+ S + QR GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 10 LDSQHQQRHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNN 69
Query: 60 IVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF 119
+VK W+ IS +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DF
Sbjct: 70 LVKEWISDISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DF 128
Query: 120 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 179
F + L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS
Sbjct: 129 FQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSR 188
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L++ D + +RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++W
Sbjct: 189 LRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSW 248
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
A+LVAR CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+
Sbjct: 249 AMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDR 308
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
YHLMPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP F
Sbjct: 309 YHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNF 366
Query: 360 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----- 414
F+ Y++Y+ + SA ++ W G VES++R L +ER+ + L H +P F
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 415 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISV 470
+K+ +F+G+ ++ V EG D+ ++ F V ++ + K GM+I
Sbjct: 426 HNKANNYVSMWFLGIIFRR-VEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEA 484
Query: 471 AHVTRRNLPNFV 482
HV ++ L +++
Sbjct: 485 THVKKKQLHHYL 496
>gi|449496519|ref|XP_002196793.2| PREDICTED: poly(A) polymerase gamma [Taeniopygia guttata]
Length = 746
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/526 (44%), Positives = 333/526 (63%), Gaps = 22/526 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PISLA P+D D + T+KL + ++ ++E QEE R VLG+L+ V+ W+ +++
Sbjct: 20 GLTSPISLAPPSDKDHIHTQKLIEAMKPFGVFEDQEELYHRTTVLGKLNNFVREWILELA 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L + ++ KIFTFGSYRLGVH G+DID LCV P H R DFF + L
Sbjct: 80 ESKNLPPSITEQVGGKIFTFGSYRLGVHTKGSDIDALCVAPSHVERS-DFFQSFFEKLKN 138
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV L + DA+VPV+KF+F G+ IDL++A+LSL + +DLD+ DS L++ D + +R
Sbjct: 139 QEEVKNLRAIEDAYVPVIKFEFDGIEIDLVFAKLSLPTVSDDLDLRDDSCLKSLDIRCIR 198
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RVTD+ILRLVP ++NFR TLR ++ WAKRRGVYSN+ GFLGG++WA+LVARICQL
Sbjct: 199 SLNGSRVTDEILRLVPNLENFRLTLRAVKLWAKRRGVYSNIMGFLGGVSWAMLVARICQL 258
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S L+++FF ++++W WP PVLL +EE L L VWDPR NP D+YH+MPIITPA
Sbjct: 259 YPNALASTLINKFFLIFSKWDWPKPVLLKRLEESFLNLPVWDPRVNPSDRYHVMPIITPA 318
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EFQRG E+ + + K ++ DW LFEP FF+ YK+Y+ +
Sbjct: 319 YPQQNSTYNVSVSTRAVMVEEFQRGLEVTDEILKGKS--DWSKLFEPLNFFQKYKHYIVL 376
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERH---TYNMLQCHPHPGDFSDKSKPLYCS-Y 425
SA + NW G V+S++R L +ER+ T +Q PG+ + Y S +
Sbjct: 377 TASAFTEEHHLNWIGLVKSKIRVLVGNLERNEFITIAHVQPQSFPGNEVLYKQNAYVSMW 436
Query: 426 FMGLQRKQG-------VPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 478
F+GL K+ V + G Q T ++QA ++ L K GM+I +V R+ L
Sbjct: 437 FLGLVFKKAESAVKTNVDLTHGIQ---SFTDTVYRQASALNIL-KEGMKIEATYVKRKQL 492
Query: 479 PNFVFPGGVRPSRPSKGTWD---SRRALERKVSSHTKPGADDGRKR 521
++ P G R + D + L+ K SS + +D + R
Sbjct: 493 -HYFLPAGTLQKRKKQRVSDISQNNSGLQCKRSSLGESCSDGSKDR 537
>gi|344245697|gb|EGW01801.1| Poly(A) polymerase gamma [Cricetulus griseus]
Length = 709
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/492 (45%), Positives = 314/492 (63%), Gaps = 15/492 (3%)
Query: 1 MGSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
+ S + QR GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 2 LDSQHQQRHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNN 61
Query: 60 IVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF 119
+VK W+ IS +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DF
Sbjct: 62 LVKEWISDISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DF 120
Query: 120 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 179
F + L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS
Sbjct: 121 FQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSR 180
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L++ D + +RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++W
Sbjct: 181 LRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSW 240
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
A+LVAR CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+
Sbjct: 241 AMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDR 300
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
YHLMPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP F
Sbjct: 301 YHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNF 358
Query: 360 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----- 414
F+ Y++Y+ + SA ++ W G VES++R L +ER+ + L H +P F
Sbjct: 359 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 417
Query: 415 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISV 470
+K+ +F+G+ ++ V EG D+ ++ F V ++ + K GM+I
Sbjct: 418 HNKANNYVSMWFLGIIFRR-VEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEA 476
Query: 471 AHVTRRNLPNFV 482
HV ++ L +++
Sbjct: 477 THVKKKQLHHYL 488
>gi|332018332|gb|EGI58937.1| Poly(A) polymerase gamma [Acromyrmex echinatior]
Length = 553
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/505 (44%), Positives = 320/505 (63%), Gaps = 16/505 (3%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
+N + LG+T IS+A P D+ RT +L++ L+ N++ES+EE R E+L +L+ +VK
Sbjct: 20 NNLRTLGMTSAISVAEPKPMDISRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQ 79
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
W++ S A+ + + ++ KI+TFGSYRLGVH GADID LCV PRH R+ D+F
Sbjct: 80 WIRDTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRQ-DYFTSF 138
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N
Sbjct: 139 FDLLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNL 198
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LV
Sbjct: 199 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLV 258
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
AR CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLM
Sbjct: 259 ARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVADRYHLM 318
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PIITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF Y
Sbjct: 319 PIITPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIMGKA--TWDKLFEPPNFFGKY 376
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPL 421
K+Y+ + + +A+D W G VES++R L +ER+ + L H +P F +
Sbjct: 377 KHYIVLLAKSLSAEDQLEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGK 435
Query: 422 YCS-YFMGL-----QRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVA 471
+CS +F+GL ++ + GE D+ +K F V + K GM I
Sbjct: 436 HCSMWFIGLAFSKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAK 495
Query: 472 HVTRRNLPNFVFPGGVRPSRPSKGT 496
HV R++L +V P ++ R ++ T
Sbjct: 496 HVKRKDLHTYVSPSLLKKERKAENT 520
>gi|54020874|ref|NP_001005684.1| poly(A) polymerase gamma [Xenopus (Silurana) tropicalis]
gi|49522894|gb|AAH75107.1| poly(A) polymerase beta (testis specific) [Xenopus (Silurana)
tropicalis]
Length = 752
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/488 (46%), Positives = 308/488 (63%), Gaps = 20/488 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLAGP D D + T+KL + +R ++E E R VLG+L+ +VK W+
Sbjct: 16 KHYGITSPISLAGPKDTDHIYTQKLTEAMRPFGVFEDDAELSHRMVVLGKLNNLVKEWIG 75
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++ K L ++ KIFTFGSYRLGVH GADID+LCV PRH R DFF +
Sbjct: 76 ELGEQKSLPPSIISAVGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQSFSEK 134
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + + L V DA VPV+KF+F IDL++ARL L IP++LD+ DS L+N D +
Sbjct: 135 LKQQDGIKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIR 194
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 195 CIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 254
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+ HLMPII
Sbjct: 255 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPII 314
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G + + + DW LFEP FF YK+Y
Sbjct: 315 TPAYPQQNSTYNVSISTRSVMVEEFKQGLSVTDEILLGRC--DWSKLFEPPNFFHKYKHY 372
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPL 421
+ + SA + W G VES++R L +ER+++ L H +P F K
Sbjct: 373 IVLTASASTEEHHLEWVGLVESKIRVLVGNLERNSFITL-AHVNPQSFPGNRDHCKDNEY 431
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVSMYTLRKPGMQISVAHVT 474
+F+G+ K+ V E +I LT ++ F +QA ++ L+K GM+I HV
Sbjct: 432 VSMWFLGIIFKK---VENAESVNIDLTHDIQSFTDTVYRQANNINMLKK-GMRIEATHVK 487
Query: 475 RRNLPNFV 482
R+ L +++
Sbjct: 488 RKQLHHYL 495
>gi|198459613|ref|XP_001361433.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
gi|198136742|gb|EAL26011.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
Length = 902
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/524 (42%), Positives = 317/524 (60%), Gaps = 39/524 (7%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G ++LG+T ISLA P DL RT L L N++ESQEE R E+L +L+ +V
Sbjct: 33 GGQPAKQLGMTSAISLAEPKPADLQRTENLRASLEPFNVFESQEELNHRMEILAKLNTLV 92
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK++S +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F
Sbjct: 93 KQWVKEMSVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFQ 151
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 152 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 211
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 212 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 271
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 272 LVARTCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 331
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS++NVS ST ++M+ EF RG I + + A W+ LFE +FF
Sbjct: 332 LMPIITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRA--SWERLFEAPSFFY 389
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QC--------- 407
Y++++ + ++++ ADD W G VES++R L +ER+ + L +C
Sbjct: 390 RYRHFIVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESA 449
Query: 408 --------------HPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFK 453
P P S S P +F+GL+ ++ E D+ +++ F
Sbjct: 450 NNSQNNSGNEDDLKQPPPNQASVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFT 505
Query: 454 QAVSMY----TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 493
+ V M+ + K GM I HV R+ L ++ ++ R S
Sbjct: 506 EHVIMHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRERKS 549
>gi|195151552|ref|XP_002016711.1| GL11728 [Drosophila persimilis]
gi|194110558|gb|EDW32601.1| GL11728 [Drosophila persimilis]
Length = 904
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/524 (42%), Positives = 317/524 (60%), Gaps = 39/524 (7%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G ++LG+T ISLA P DL RT L L N++ESQEE R E+L +L+ +V
Sbjct: 34 GGQPAKQLGMTSAISLAEPKPADLQRTENLRASLEPFNVFESQEELNHRMEILAKLNTLV 93
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK++S +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F
Sbjct: 94 KQWVKEMSVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFQ 152
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 153 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 212
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 213 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 272
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 273 LVARTCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 332
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS++NVS ST ++M+ EF RG I + + A W+ LFE +FF
Sbjct: 333 LMPIITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRA--SWERLFEAPSFFY 390
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QC--------- 407
Y++++ + ++++ ADD W G VES++R L +ER+ + L +C
Sbjct: 391 RYRHFIVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESA 450
Query: 408 --------------HPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFK 453
P P S S P +F+GL+ ++ E D+ +++ F
Sbjct: 451 NNSQNNSGNEDDLKQPPPNQASVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFT 506
Query: 454 QAVSMY----TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 493
+ V M+ + K GM I HV R+ L ++ ++ R S
Sbjct: 507 EHVIMHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRERKS 550
>gi|449018860|dbj|BAM82262.1| nuclear poly(A) polymerase [Cyanidioschyzon merolae strain 10D]
Length = 561
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/435 (50%), Positives = 294/435 (67%), Gaps = 27/435 (6%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
+G+S + G+TEP+S A PT +L TR LE+ L NLY S+EE R VLG L+ +
Sbjct: 2 LGTSVARFKGVTEPVSTATPTAAELRLTRTLEECLHANNLYPSREEQRQRLNVLGALNAV 61
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
V WV++++ A+ L++ +++E A+IFTFGSYRLGV+GPGAD+DTLCV PR R FF
Sbjct: 62 VVEWVRRVALAQRLSEDVVEEHGARIFTFGSYRLGVNGPGADVDTLCVVPRFVERNRYFF 121
Query: 121 G-------------ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV 167
G L ML + EL V A+VPV+K +F GV +DLL A ++L
Sbjct: 122 GLPDEQGSRAPTQVVLADMLRQDDRTEELVTVESAYVPVIKIRFMGVDMDLLCAPIALMK 181
Query: 168 IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVY 227
IP++ +I D++L+N D+ T RSLNG RVTD IL LVP + FRTTLRC++FWAKRRG+Y
Sbjct: 182 IPKNFNILDDAVLRNVDDATQRSLNGVRVTDSILELVPDVDTFRTTLRCIKFWAKRRGIY 241
Query: 228 SNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEG 283
SNV G+LGG+ WA+LVAR+CQLYPNA ++++S FFR+Y+QW+WP PV LC I G
Sbjct: 242 SNVLGYLGGVAWAMLVARVCQLYPNATAAVVLSAFFRLYSQWQWPKPVKLCPIIRHQHAG 301
Query: 284 SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAME 342
L+VWDP +P+D+ HLMPIITPAYP MNS+YNV+ STLRIMM+EF RG +IC + +
Sbjct: 302 LRQLKVWDP-TDPRDRRHLMPIITPAYPSMNSTYNVTHSTLRIMMEEFARGQQICADVLA 360
Query: 343 KNEAD------VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK 396
+D DW+ L EP FF YK+YL+I+I+A N DDL+ W+G VESRLR L +
Sbjct: 361 AAGSDGTGVSPRDWERLLEPSDFFARYKHYLQIEITAGNMDDLKKWRGHVESRLRLLVQR 420
Query: 397 IERHTYNMLQCHPHP 411
+E + HP P
Sbjct: 421 LE--VLPPVSVHPWP 433
>gi|449549561|gb|EMD40526.1| hypothetical protein CERSUDRAFT_80191 [Ceriporiopsis subvermispora
B]
Length = 629
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/611 (41%), Positives = 349/611 (57%), Gaps = 65/611 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M ++NG LG+T PIS + T L LR +E++EEA +RE VLGR+ +
Sbjct: 1 MATNNGY-LGVTPPISTNESNAREKEVTVTLMDELRRQGTFETEEEAKTREIVLGRVAAL 59
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK +V+ +S +GL++ A KIFTFGSYRLGVHGPG+DIDTLCV P+H +RE DFF
Sbjct: 60 VKRFVRHVSLKRGLSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFF 118
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
+ML E VTE VPDA+VP++K K SG+ +DLL ARL+L IP+DL + D++L
Sbjct: 119 EVFEEMLKETEGVTEASGVPDAYVPILKAKISGIPLDLLMARLALSAIPDDLSLQDDNLL 178
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N DE+ VRSLNG RVTD+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 179 RNLDERCVRSLNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWA 238
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVARICQLYPNA+ +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+
Sbjct: 239 MLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPKLYPADRA 298
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M +++NVS ST IM +EF++G EI + + +A +W LF FF
Sbjct: 299 HRMPIITPAYPSMCATHNVSASTQMIMTEEFKKGSEIVDKVIVGKA--NWSELFAKHDFF 356
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF------ 414
Y+ YL++ S + + W G VESR+RQL +K+E + ++ HP F
Sbjct: 357 HKYRYYLQVIASTGSQELQTKWAGTVESRIRQLVMKLE-YVDSLTLAHPFIKGFEQVSCC 415
Query: 415 ----------------------------SDKSKPLYCSYF---MGLQRKQGVPVGEGEQF 443
D + +Y + F + ++ KQ VG +
Sbjct: 416 LSDEEVRAVAQGEISEVIAKRKKEDIEGKDGASTVYSTTFYIGLAIEPKQPGAVGP-RKL 474
Query: 444 DIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA 502
DI EF + V M+ M I V H+ LP++VF G R R ++ + +
Sbjct: 475 DISYPTTEFTKLVKMWEKYDDSTMGIVVRHIKSTALPDYVFEPGERQPRSAQKRPKTSKN 534
Query: 503 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREG----------- 551
++ S++T P D K+++ ++V L AT P F+
Sbjct: 535 ADK--SNNTSP--DMPNKKRRASNSVSESL------ATTPLPPQPFKTAQNGVTSTAAIP 584
Query: 552 SPIMSTISSSS 562
SPI T +SSS
Sbjct: 585 SPIALTAASSS 595
>gi|322802531|gb|EFZ22846.1| hypothetical protein SINV_14294 [Solenopsis invicta]
Length = 592
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/500 (44%), Positives = 315/500 (63%), Gaps = 16/500 (3%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
+N + LG+T IS+A P D+ RT +L++ L+ N++ES+EE R E+L +L+ +VK
Sbjct: 10 NNLRTLGMTSAISVAEPKPMDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQ 69
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
W++ S A+ + + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F
Sbjct: 70 WIRDTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRA-DYFTSF 128
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N
Sbjct: 129 FDLLRMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNL 188
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LV
Sbjct: 189 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLV 248
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
AR CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLM
Sbjct: 249 ARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLM 308
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PIITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF Y
Sbjct: 309 PIITPAYPQQNSTFNVSISTRTIMQEAFENGLAITEEIIMGKA--TWDKLFEPPNFFGKY 366
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPL 421
K+Y+ + + A+D W G VES++R L +ER+ + L H +P F +
Sbjct: 367 KHYIVLLAKSLTAEDQLEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGK 425
Query: 422 YCS-YFMGL-----QRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVA 471
+CS +F+GL ++ + GE D+ +K F V + K GM I
Sbjct: 426 HCSMWFIGLSFSKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAK 485
Query: 472 HVTRRNLPNFVFPGGVRPSR 491
HV R++L +V P ++ R
Sbjct: 486 HVKRKDLNTYVSPSLLKRER 505
>gi|291386749|ref|XP_002709901.1| PREDICTED: poly(A) polymerase gamma [Oryctolagus cuniculus]
Length = 739
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/523 (43%), Positives = 320/523 (61%), Gaps = 16/523 (3%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFVFPGGVRPSRPSKGTWD-SRRALERKVSSHTKPGADDGR 519
L +++ P + + + D SR L+ K SS D R
Sbjct: 492 LHHYL-PAEILQKKKKQSLSDVSRSGLQSKRSSLDSNCLDSSR 533
>gi|213625101|gb|AAI69821.1| LOC733387 protein [Xenopus laevis]
Length = 750
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/508 (45%), Positives = 314/508 (61%), Gaps = 21/508 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT ISLAGP D D + T+KL + +R ++E E R VLG+L+ +VK W+
Sbjct: 15 KHYGITSSISLAGPKDIDHIYTQKLTEAMRPFGVFEDDAELSHRMVVLGKLNNLVKEWIA 74
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++ K L ++ A KIFTFGSYRLGVH GADID+LCV PRH R DFF +
Sbjct: 75 ELGEQKSLPPTIISAAGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQTFSEK 133
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + + L V DA VPV+KF+F IDL++ARL L IP++LD+ DS L+N D +
Sbjct: 134 LKQQDGIKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIR 193
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 194 CIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 253
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+ HLMPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPII 313
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G + + + DW LFEP FF YK+Y
Sbjct: 314 TPAYPQQNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRC--DWSKLFEPPNFFHKYKHY 371
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPL 421
+ + SA + W G VES++R L +ER+ + L H +P F K
Sbjct: 372 IVLTASASTEEHHLEWVGLVESKIRVLVGNLERNNFITL-AHVNPQSFPGNRDHCKDNEY 430
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVSMYTLRKPGMQISVAHVT 474
+F+G+ K+ V E +I LT ++ F +QA ++ L+K GM+I HV
Sbjct: 431 VSMWFLGIIFKK---VENAESVNIDLTHDIQSFTDTVYRQANNINMLKK-GMKIEATHVK 486
Query: 475 RRNLPNFVFPGGVRPSRPSKGTWDSRRA 502
R+ L +++ P V R + D R+
Sbjct: 487 RKQLHHYL-PAEVVQKRKKQSVPDINRS 513
>gi|26330928|dbj|BAC29194.1| unnamed protein product [Mus musculus]
Length = 739
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 307/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
IS +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPTNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K+
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|157822073|ref|NP_001100714.1| poly(A) polymerase gamma [Rattus norvegicus]
gi|149044811|gb|EDL97997.1| poly(A) polymerase gamma (predicted) [Rattus norvegicus]
Length = 739
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/485 (45%), Positives = 307/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
IS +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L V L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGVRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K+
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|194755527|ref|XP_001960043.1| GF13172 [Drosophila ananassae]
gi|190621341|gb|EDV36865.1| GF13172 [Drosophila ananassae]
Length = 835
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/505 (43%), Positives = 312/505 (61%), Gaps = 41/505 (8%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+ +VK WVK
Sbjct: 27 KQLGMTSAISLAEPRPEDLQRTEELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVK 86
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F ++
Sbjct: 87 EISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEV 145
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D +
Sbjct: 146 LKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHR 205
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 206 SVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVART 265
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPII
Sbjct: 266 CQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPII 325
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS++NVS ST ++++ EF RG I + E + WD LFE +FF Y+++
Sbjct: 326 TPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWDRLFEAPSFFYRYRHF 383
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------- 417
+ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 384 IVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANSSQ 442
Query: 418 --------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 457
S P +F+GL+ ++ E D+ +++ F + V
Sbjct: 443 NNSGNEDDLKQSQGSQSSVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVM 498
Query: 458 MY----TLRKPGMQISVAHVTRRNL 478
M+ + K GM I HV R+ L
Sbjct: 499 MHGVNIKMLKEGMTIDARHVKRKQL 523
>gi|198433414|ref|XP_002124981.1| PREDICTED: similar to Poly(A) polymerase gamma (PAP-gamma)
(Polynucleotide adenylyltransferase gamma) (SRP RNA
3-adenylating enzyme) (Neo-poly(A) polymerase) (Neo-PAP)
[Ciona intestinalis]
Length = 833
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/486 (45%), Positives = 306/486 (62%), Gaps = 10/486 (2%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S G+ GIT PISLA PT+ D + T KL +++ ++ES+ E +R VLG+L++IVK
Sbjct: 3 SGGKTYGITSPISLAEPTEKDRVLTEKLIEHIEPYGVFESESEHSARRIVLGKLNEIVKE 62
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V +S + L L+ A K++TFGSYRLGV GADIDTLCV PRH R DFF
Sbjct: 63 FVMNVSEERKLPQSLIDTAGGKLYTFGSYRLGVCAKGADIDTLCVVPRHVNRS-DFFSVF 121
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E EV+EL + DA VPV+K KF GV ID+L++RL+L V+P D D+ DS+L+N
Sbjct: 122 CTLLKERSEVSELRAIEDAFVPVIKLKFEGVEIDILFSRLALQVVPPDQDLRDDSLLKNL 181
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D + +RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR+G+YSN+ G+LGG++WA+LV
Sbjct: 182 DIRCIRSLNGCRVTDEILHLVPNIENFRLTLRVIKLWAKRKGIYSNMLGYLGGVSWAMLV 241
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKDKYHL 302
AR CQLYPNA+ S LV RFF V++QW WP PVLL EE +L L VWDPR NP D+ HL
Sbjct: 242 ARTCQLYPNAIASTLVQRFFWVFSQWEWPRPVLLKQPEESNTLNLPVWDPRYNPSDRLHL 301
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MPIITPAYP NS+YNV+ S+L +M EF G+ + + +N++ W L E FF
Sbjct: 302 MPIITPAYPQQNSTYNVTRSSLTVMKGEFIDGYRVTAEIHENKS--SWLKLLETPNFFNE 359
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDK 417
YK+++ + SAE+ ++ W G VES++R L +ER+ Y ++ +P D
Sbjct: 360 YKHFIVLMASAESQENFNLWTGLVESKIRILVGYLERNDYILIAHINQTGYPQEVKEKDV 419
Query: 418 SKPLYCSYFMGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRR 476
+ +F+GL+ K + DI+ + + K GM++ + R
Sbjct: 420 TTAYVNRWFLGLRFVKDLISTNINLTHDIQAFTDTLHRQAHNSKVFKEGMKVEATYSRRS 479
Query: 477 NLPNFV 482
LP ++
Sbjct: 480 QLPKYL 485
>gi|147900391|ref|NP_001091535.1| poly(A) polymerase gamma [Bos taurus]
gi|146186839|gb|AAI40626.1| PAPOLG protein [Bos taurus]
gi|296482594|tpg|DAA24709.1| TPA: poly(A) polymerase gamma [Bos taurus]
Length = 740
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 307/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 EVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I E+LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|426223633|ref|XP_004005979.1| PREDICTED: poly(A) polymerase gamma [Ovis aries]
Length = 740
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 307/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 EVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I E+LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|299748265|ref|XP_001837569.2| polymerase [Coprinopsis cinerea okayama7#130]
gi|298407893|gb|EAU84193.2| polymerase [Coprinopsis cinerea okayama7#130]
Length = 595
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 247/594 (41%), Positives = 341/594 (57%), Gaps = 60/594 (10%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PIS A + + T L + LR N +ES+EEA +RE VLGR+ +VK +V KI
Sbjct: 12 LGVTPPISTAESNEREKEVTVTLMEELRRQNTFESEEEARTREIVLGRVAALVKKFVYKI 71
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S A+GL++ Q A KIFTFGSYRLGVHGPG+DIDTLCV P+H TRE DFF ML
Sbjct: 72 SIARGLSESAAQAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRE-DFFDTFEPMLK 130
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
EM VTE+ VP+A+VP++K + G+ +D L ARL+L IP+DL + D++L+N DE+ V
Sbjct: 131 EMEGVTEVSGVPEAYVPIIKTEIDGIPLDFLMARLNLASIPDDLSLQDDNLLRNLDERCV 190
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSL G R ++ILRLVP + FR LRC++ WA+RR +YSNV GFLGG+ WALLVARICQ
Sbjct: 191 RSLGGSRQVNEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWALLVARICQ 250
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNA+ +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H MPIITP
Sbjct: 251 LYPNALAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRAHRMPIITP 310
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP M S++NV+ ST IM +EF+RG +I + + A W LF FF Y+ YL+
Sbjct: 311 AYPSMCSTHNVTASTQMIMTEEFKRGADIVDRVIVGTA--QWSELFAKHDFFHKYRYYLQ 368
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-------------- 414
I S + D W G VESR+RQL +K+E + +++ HP F
Sbjct: 369 IIASTGDPDLQNKWSGTVESRIRQLVMKLE-YVESLILAHPFIKGFDQVSYCLNEDEVKA 427
Query: 415 --------------------SDKSKPLYCSYF---MGLQRKQGVPVGEGEQFDIRLTVKE 451
+ S+ +Y + F + +Q K VG + DI ++
Sbjct: 428 VVQGEISEAIASRKKEDIEGKEGSQTVYTTTFYIGLAIQPKPAGAVGP-RRLDISYPTQD 486
Query: 452 FKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSH 510
F + V M+ + M I V H+ LP+ VF G RP+K T + +SS
Sbjct: 487 FSKLVKMWDKYDESKMGIIVRHIKSSALPDNVFDPG---ERPAKVTQKRVKGKSSNISS- 542
Query: 511 TKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSIN 564
+ KR+++ +V +R P+ +G +P++ T+ S N
Sbjct: 543 -----EQPNKRQRSSTSVADTIR--------PTENGTSTGTTPVVETLVRPSFN 583
>gi|226494207|ref|NP_766143.2| poly(A) polymerase gamma [Mus musculus]
gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|37589275|gb|AAH59271.1| Poly(A) polymerase gamma [Mus musculus]
gi|73671773|gb|AAZ80292.1| SRP 3'-adenylating protein [Mus musculus]
gi|148675952|gb|EDL07899.1| poly(A) polymerase gamma, isoform CRA_b [Mus musculus]
Length = 739
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 307/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
IS +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K+
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|440911569|gb|ELR61221.1| Poly(A) polymerase gamma, partial [Bos grunniens mutus]
Length = 737
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 307/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 14 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 73
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 74 EVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 132
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I E+LD+ DS L++ D +
Sbjct: 133 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIR 192
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 193 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 252
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 253 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 312
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 313 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 370
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 371 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 429
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 430 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 488
Query: 478 LPNFV 482
L +++
Sbjct: 489 LHHYL 493
>gi|297667577|ref|XP_002812053.1| PREDICTED: poly(A) polymerase gamma [Pongo abelii]
Length = 736
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|405945155|gb|EKC17170.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 745
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/485 (44%), Positives = 304/485 (62%), Gaps = 15/485 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISL GP DL + KLE+ +R ++ES+EE R +VL +++ +V+ W+K +S
Sbjct: 18 GITSPISLEGPKPVDLKLSEKLEEAMRPHGVFESEEEMSHRMDVLHKINTLVREWIKDVS 77
Query: 70 RAKG-LNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
R K + + K+ TFGSYRLGVH GADIDTLCV PRH R DFF ++L
Sbjct: 78 RQKNNYPEDKIDAFGGKVCTFGSYRLGVHTKGADIDTLCVAPRHVDRS-DFFSSFFEILK 136
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
PEV +L V +A VPV+K F G+ +D+L+ARL+L IPE++D+ +S+L+N +E+ V
Sbjct: 137 NTPEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALPQIPEEIDLRDESLLKNLNEKCV 196
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRVTD+IL LVP +FR TLR ++ WAK++G+YSN GFLGG++WA+LVAR+CQ
Sbjct: 197 RSLNGCRVTDEILHLVPNQHSFRMTLRAIKLWAKKKGIYSNALGFLGGVSWAMLVARVCQ 256
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI---EEGSLGLQVWDPRRNPKDKYHLMPI 305
LYPNA P+ L+ +FF + +W WP PVLL A+ + +L VWDPR N D++HLMPI
Sbjct: 257 LYPNAAPATLLHKFFMIIHKWNWPQPVLLKALVHENKFNLSFPVWDPRVNTSDRFHLMPI 316
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
ITPAYP NS++NV+ ST IM +E + G EI + E +W LFEP FF+ YK+
Sbjct: 317 ITPAYPQQNSTFNVTLSTRSIMTEELKDGLEIVSKI--YEGREEWGALFEPSNFFQKYKH 374
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERH-TYNMLQCHPHP-GDFSDKSKPLYC 423
Y+ + SA D W G+VES++R L +ER+ + HP P G ++ C
Sbjct: 375 YIVLTASAVEEKDYLEWHGYVESKIRLLVGNLERNPCIKLAHVHPSPLGPLNESDGEYLC 434
Query: 424 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT----LRKPGMQISVAHVTRRNLP 479
+F+GL + + + D+ ++ F V + L K GM++ + HV RR L
Sbjct: 435 RWFIGLTFVKI--ENQNQNVDLTFDIQSFTNTVHKHAYHINLMKDGMKVEIKHVKRRQLD 492
Query: 480 NFVFP 484
+V P
Sbjct: 493 LYVPP 497
>gi|119620435|gb|EAX00030.1| poly(A) polymerase gamma, isoform CRA_b [Homo sapiens]
Length = 743
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|13641252|gb|AAK31791.1| SRP RNA 3' adenylating enzyme/pap2 [Homo sapiens]
Length = 736
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLASPEEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQSEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|426335656|ref|XP_004029330.1| PREDICTED: poly(A) polymerase gamma [Gorilla gorilla gorilla]
Length = 736
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|296223786|ref|XP_002757774.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Callithrix jacchus]
Length = 736
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/506 (43%), Positives = 314/506 (62%), Gaps = 15/506 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGSKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFVFPGGVRPSRPSKGTWDSRRAL 503
L +++ P + + + D R+L
Sbjct: 492 LHHYL-PAEILQKKKKQSLSDVSRSL 516
>gi|194220708|ref|XP_001917579.1| PREDICTED: poly(A) polymerase gamma-like [Equus caballus]
Length = 741
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELTHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|147905450|ref|NP_001089116.1| poly(A) polymerase gamma [Xenopus laevis]
gi|73671771|gb|AAZ80291.1| SRP 3'-adenylating protein [Xenopus laevis]
Length = 751
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/568 (42%), Positives = 333/568 (58%), Gaps = 22/568 (3%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT ISLAGP D D + T+KL + + ++E E R VLG+L+ +VK W+
Sbjct: 16 KHYGITSSISLAGPKDIDHIYTQKLTEAMGPFGVFEDDAELSHRMVVLGKLNNLVKEWIA 75
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++ K L ++ A KIFTFGSYRLGVH GADID+LCV PRH R DFF +
Sbjct: 76 ELGEQKSLPPTIISAAGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQTFSEK 134
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + + L V DA VPV+KF+F IDL++ARL L IP++LD+ DS L+N D +
Sbjct: 135 LKQQDGIKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIR 194
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 195 CIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 254
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+ HLMPII
Sbjct: 255 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPII 314
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G + + + DW LFEP FF YK+Y
Sbjct: 315 TPAYPQQNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRC--DWSKLFEPPNFFHKYKHY 372
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPL 421
+ + SA + W G VES++R L +ER+ + L H +P F K
Sbjct: 373 IVLTASASTEEHHLEWVGLVESKIRVLVGNLERNNFITL-AHVNPQSFPGNRDHCKDNEY 431
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVSMYTLRKPGMQISVAHVT 474
+F+G+ K+ V E +I LT ++ F +QA ++ L+K GM+I HV
Sbjct: 432 VSMWFLGIIFKK---VENAESVNIDLTHDIQSFTDTVYRQANNINMLKK-GMKIEATHVK 487
Query: 475 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 534
R+ L +++ P V R + D R+ +S T + + TD
Sbjct: 488 RKQLHHYL-PAEVVQKRKKQSVPDINRSACALLSKRTSLDGNFLDSSRDTDTGTPCD-SP 545
Query: 535 AKCHATMPSSSGEFREGSPIMSTISSSS 562
CH + S S F + ++ +SS+
Sbjct: 546 TSCHKSSRSDSPSFPDAHRSLTEGTSST 573
>gi|16306568|ref|NP_075045.2| poly(A) polymerase gamma [Homo sapiens]
gi|332813224|ref|XP_515496.3| PREDICTED: poly(A) polymerase gamma isoform 6 [Pan troglodytes]
gi|397521664|ref|XP_003830910.1| PREDICTED: poly(A) polymerase gamma [Pan paniscus]
gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Neo-poly(A) polymerase; Short=Neo-PAP; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|15080911|gb|AAK83701.1|AF312211_1 neo-poly(A) polymerase [Homo sapiens]
gi|15384858|emb|CAC59751.1| poly(A) polymerase gamma [Homo sapiens]
gi|84202581|gb|AAI11702.1| Poly(A) polymerase gamma [Homo sapiens]
gi|88682947|gb|AAI13748.1| Poly(A) polymerase gamma [Homo sapiens]
gi|119620439|gb|EAX00034.1| poly(A) polymerase gamma, isoform CRA_f [Homo sapiens]
gi|189054448|dbj|BAG37221.1| unnamed protein product [Homo sapiens]
gi|410216568|gb|JAA05503.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410265336|gb|JAA20634.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410295358|gb|JAA26279.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410346708|gb|JAA40709.1| poly(A) polymerase gamma [Pan troglodytes]
Length = 736
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|311252569|ref|XP_003125156.1| PREDICTED: poly(A) polymerase gamma-like [Sus scrofa]
Length = 741
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 307/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 EVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|10435509|dbj|BAB14604.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 14 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 73
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 74 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 132
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 133 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 192
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 193 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 252
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 253 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 312
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 313 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 370
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 371 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 429
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 430 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 488
Query: 478 LPNFV 482
L +++
Sbjct: 489 LHHYL 493
>gi|348563534|ref|XP_003467562.1| PREDICTED: poly(A) polymerase gamma [Cavia porcellus]
Length = 741
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|194881425|ref|XP_001974840.1| GG20896 [Drosophila erecta]
gi|190658027|gb|EDV55240.1| GG20896 [Drosophila erecta]
Length = 818
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/510 (43%), Positives = 314/510 (61%), Gaps = 41/510 (8%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+ +V
Sbjct: 23 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPFNVFESQDELNHRMEILAKLNTLV 82
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+IS +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F
Sbjct: 83 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 141
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 142 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 201
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 202 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 261
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 262 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 321
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 322 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRISWERLFEAPSFFY 379
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 417
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F +
Sbjct: 380 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFRKGQS 438
Query: 418 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 452
S P +F+GL+ ++ E D+ +++ F
Sbjct: 439 ANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 494
Query: 453 KQAVSMY----TLRKPGMQISVAHVTRRNL 478
+ V+M+ + K GM I HV R+ L
Sbjct: 495 TEHVTMHGVNIKMLKEGMTIDARHVKRKQL 524
>gi|442624286|ref|NP_001261097.1| hiiragi, isoform D [Drosophila melanogaster]
gi|440214537|gb|AGB93629.1| hiiragi, isoform D [Drosophila melanogaster]
Length = 827
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 313/510 (61%), Gaps = 41/510 (8%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+ +V
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+IS +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 259
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 260 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 319
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 320 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFY 377
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 417
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 378 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQS 436
Query: 418 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 452
S P +F+GL+ ++ E D+ +++ F
Sbjct: 437 ANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 492
Query: 453 KQAVSMY----TLRKPGMQISVAHVTRRNL 478
+ V M+ + K GM I HV R+ L
Sbjct: 493 TEHVMMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|195584945|ref|XP_002082256.1| GD25311 [Drosophila simulans]
gi|194194265|gb|EDX07841.1| GD25311 [Drosophila simulans]
Length = 815
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 313/510 (61%), Gaps = 41/510 (8%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+ +V
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+IS +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 259
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 260 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 319
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 320 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFY 377
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 417
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 378 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQS 436
Query: 418 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 452
S P +F+GL+ ++ E D+ +++ F
Sbjct: 437 ANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 492
Query: 453 KQAVSMY----TLRKPGMQISVAHVTRRNL 478
+ V M+ + K GM I HV R+ L
Sbjct: 493 TEHVMMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|403260636|ref|XP_003922768.1| PREDICTED: poly(A) polymerase gamma [Saimiri boliviensis
boliviensis]
Length = 736
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGSKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|195380742|ref|XP_002049128.1| GJ21414 [Drosophila virilis]
gi|194143925|gb|EDW60321.1| GJ21414 [Drosophila virilis]
Length = 880
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/513 (43%), Positives = 314/513 (61%), Gaps = 44/513 (8%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G ++LG+T ISLA P +DL RT +L K L N++ESQ+E R E+L +L+ +V
Sbjct: 32 GGQPAKQLGMTSAISLAEPRAEDLQRTEELSKSLEPYNVFESQDELNHRMEILAKLNTLV 91
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+IS +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F
Sbjct: 92 KQWVKEISVSKNMPEAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 150
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 151 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLK 210
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 211 NLDPRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 270
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L VWDPR N D+YH
Sbjct: 271 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYH 330
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS++NVS ST ++++ EF RG I + E V WD LFE +FF
Sbjct: 331 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMSITD--EIMLGRVSWDRLFEAPSFFY 388
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 417
Y++++ + ++++ ADD W G VES++R L +ER+ + +L H +P F K
Sbjct: 389 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIVL-AHVNPKCFELKKGAA 447
Query: 418 ----------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV 449
+ P +F+GL+ ++ E D+ ++
Sbjct: 448 SANNSQNNSGNEEDLKQQQQQPAQTAVTTAPFCSLWFIGLEFER----SENLNIDLTESI 503
Query: 450 KEFKQAVSMYTLR----KPGMQISVAHVTRRNL 478
+ F + V M+ L K GM I H+ R+ L
Sbjct: 504 QNFTEHVIMHGLNIKMLKEGMAIDARHLKRKQL 536
>gi|195335951|ref|XP_002034618.1| GM19819 [Drosophila sechellia]
gi|194126588|gb|EDW48631.1| GM19819 [Drosophila sechellia]
Length = 814
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 313/510 (61%), Gaps = 41/510 (8%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+ +V
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+IS +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 259
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 260 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 319
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 320 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFY 377
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 417
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 378 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQS 436
Query: 418 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 452
S P +F+GL+ ++ E D+ +++ F
Sbjct: 437 ANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 492
Query: 453 KQAVSMY----TLRKPGMQISVAHVTRRNL 478
+ V M+ + K GM I HV R+ L
Sbjct: 493 TEHVMMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|395829706|ref|XP_003787987.1| PREDICTED: poly(A) polymerase gamma [Otolemur garnettii]
Length = 741
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 305/485 (62%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA + W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEEHQLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|344291804|ref|XP_003417620.1| PREDICTED: poly(A) polymerase gamma-like [Loxodonta africana]
Length = 741
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 305/485 (62%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTEKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQSISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPADRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|119620434|gb|EAX00029.1| poly(A) polymerase gamma, isoform CRA_a [Homo sapiens]
Length = 508
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/491 (44%), Positives = 309/491 (62%), Gaps = 15/491 (3%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFVFPGGVR 488
L +++ P +R
Sbjct: 492 LHHYL-PAEIR 501
>gi|126303830|ref|XP_001375093.1| PREDICTED: poly(A) polymerase gamma [Monodelphis domestica]
Length = 748
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/484 (44%), Positives = 311/484 (64%), Gaps = 12/484 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 16 KHYGITSPISLASPKEIDHIYTQKLIEAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 75
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 76 ELSESKNLPPSVVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 134
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L + DA+VPV+KF+F G+ IDL++ARL++ + ++LD+ DS L++ D +
Sbjct: 135 LKHQDGIRNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIR 194
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 195 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 254
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPII
Sbjct: 255 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 314
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y
Sbjct: 315 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKS--DWSKLLEPPNFFQKYRHY 372
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYC 423
+ + SA ++ W G VES++R L +ER+ + + +P PG+ + Y
Sbjct: 373 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYV 432
Query: 424 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNL 478
S +F+G+ ++ V E D+ ++ F V + + K GM+I HV ++ L
Sbjct: 433 SMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 491
Query: 479 PNFV 482
+++
Sbjct: 492 HHYL 495
>gi|148675951|gb|EDL07898.1| poly(A) polymerase gamma, isoform CRA_a [Mus musculus]
Length = 650
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 307/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 74 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 133
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
IS +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 134 DISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 192
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 193 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 252
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 253 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 312
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 313 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 372
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 373 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 430
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K+
Sbjct: 431 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNY 489
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 490 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQ 548
Query: 478 LPNFV 482
L +++
Sbjct: 549 LHHYL 553
>gi|383413715|gb|AFH30071.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|380815688|gb|AFE79718.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|355565713|gb|EHH22142.1| hypothetical protein EGK_05354, partial [Macaca mulatta]
gi|355751336|gb|EHH55591.1| hypothetical protein EGM_04830, partial [Macaca fascicularis]
Length = 733
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 14 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 73
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 74 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 132
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 133 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 192
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 193 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 252
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 253 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 312
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 313 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 370
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 371 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 429
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 430 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 488
Query: 478 LPNFV 482
L +++
Sbjct: 489 LHHYL 493
>gi|431912670|gb|ELK14688.1| Poly(A) polymerase gamma [Pteropus alecto]
Length = 741
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 305/485 (62%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|301783573|ref|XP_002927202.1| PREDICTED: poly(A) polymerase gamma-like [Ailuropoda melanoleuca]
Length = 739
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|195487053|ref|XP_002091755.1| GE13836 [Drosophila yakuba]
gi|194177856|gb|EDW91467.1| GE13836 [Drosophila yakuba]
Length = 820
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 312/510 (61%), Gaps = 41/510 (8%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G ++LG+T ISLA P +DL RT L L N++ESQ+E R E+L +L+ +V
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDDLRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+IS +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 259
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 260 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 319
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 320 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFY 377
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 417
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 378 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQS 436
Query: 418 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 452
S P +F+GL+ ++ E D+ +++ F
Sbjct: 437 ANNSQNNSGNEDDLKQSQGSQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 492
Query: 453 KQAVSMY----TLRKPGMQISVAHVTRRNL 478
+ V M+ + K GM I HV R+ L
Sbjct: 493 TEHVMMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|410954895|ref|XP_003984095.1| PREDICTED: poly(A) polymerase gamma [Felis catus]
Length = 762
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 38 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 97
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 98 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 156
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 157 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 216
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 217 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 276
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 277 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 336
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 337 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 394
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 395 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 453
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 454 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 512
Query: 478 LPNFV 482
L +++
Sbjct: 513 LHHYL 517
>gi|395329949|gb|EJF62334.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 628
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/565 (41%), Positives = 326/565 (57%), Gaps = 60/565 (10%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G++ Q LG+T PI+ + + TR L + L+ +ES++E+ +RE VLGR+ +V
Sbjct: 6 GATTSQHLGVTPPIATSESNPREKEVTRTLLEELKRQGTFESEDESKTREIVLGRIAALV 65
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K +V ++ +GL+D A KIFTFGSYRLGVHGPG+DIDTLCV P+H +RE DFF
Sbjct: 66 KKFVHTVALREGLSDAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFD 124
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
ML + V E+ VPDA+VP++K K SG+ IDL+ ARL+L IP+DL + D++L+
Sbjct: 125 VFEHMLKDAEGVAEVSGVPDAYVPIIKIKMSGIPIDLVMARLALSTIPDDLSLQDDNLLR 184
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D++ VRSLNG RVTD+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA+
Sbjct: 185 NLDDRCVRSLNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAM 244
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVARICQLYPNAV +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H
Sbjct: 245 LVARICQLYPNAVAGAIVSRFFIIMYQWAWPQPVLLKQIEDGPLPVRVWNPKSYPADRAH 304
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPIITPAYP M +++NV+ ST IM +EF++ EI + + N+A W LF FF
Sbjct: 305 RMPIITPAYPSMCATHNVTQSTQMIMTEEFKKASEIVDKVIINKA--SWSDLFARHDFFH 362
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
Y+ YL++ S + + W G VESR+RQL +K+E + ++ HP F S
Sbjct: 363 KYRYYLQVIASTGSPELQVKWSGTVESRVRQLVMKLE-YVESLALAHPFIKGFEQVS--- 418
Query: 422 YC--------------------------------------SYFMGLQRKQGVPVGEG-EQ 442
YC ++++GL + P G +
Sbjct: 419 YCINDEEVRSVAQGEVSEAVARRKKEDIEGIEGASAVYSTTFYIGLAVEPKQPGAVGPRR 478
Query: 443 FDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVR-----PSRPSKGT 496
DI EF + V M+ + M I V H+ LP +VF G R RP K T
Sbjct: 479 LDISYPTTEFTKLVKMWEKFDEQKMGIVVRHIKSSALPEYVFDDGERQPRLAQKRPKKET 538
Query: 497 WDSRRALERKVSSHTKPGADDGRKR 521
D SS+T P + + R
Sbjct: 539 TDR--------SSNTSPDMPNKKPR 555
>gi|21064419|gb|AAM29439.1| RE25878p [Drosophila melanogaster]
Length = 659
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 313/510 (61%), Gaps = 41/510 (8%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+ +V
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+IS +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 259
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 260 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 319
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 320 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFY 377
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 417
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 378 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLISNLERNPHIAL-AHVNPKCFEFKKGQS 436
Query: 418 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 452
S P +F+GL+ ++ E D+ +++ F
Sbjct: 437 ANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 492
Query: 453 KQAVSMY----TLRKPGMQISVAHVTRRNL 478
+ V M+ + K GM I HV R+ L
Sbjct: 493 TEHVMMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|281354338|gb|EFB29922.1| hypothetical protein PANDA_016961 [Ailuropoda melanoleuca]
Length = 736
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 14 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 73
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 74 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 132
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 133 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 192
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 193 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 252
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 253 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 312
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 313 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 370
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 371 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 429
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 430 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 488
Query: 478 LPNFV 482
L +++
Sbjct: 489 LHHYL 493
>gi|417404307|gb|JAA48913.1| Putative polya polymerase [Desmodus rotundus]
Length = 742
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 305/485 (62%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHYKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|55727879|emb|CAH90692.1| hypothetical protein [Pongo abelii]
gi|83405193|gb|AAI10907.1| PAPOLG protein [Homo sapiens]
Length = 506
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|218847770|ref|NP_001136382.1| poly(A) polymerase alpha [Xenopus (Silurana) tropicalis]
gi|197246240|gb|AAI68811.1| Unknown (protein for MGC:188992) [Xenopus (Silurana) tropicalis]
Length = 732
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/501 (45%), Positives = 317/501 (63%), Gaps = 18/501 (3%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
GS Q+ GIT PISLA P D D T+KL + L+ ++E +EE R +LG+L+ +
Sbjct: 9 GSQQSQKTYGITSPISLATPKDTDCTLTQKLIETLKPFGVFEEEEELQHRILILGKLNNL 68
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK W+++IS K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF
Sbjct: 69 VKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFF 127
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L
Sbjct: 128 SSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 187
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA
Sbjct: 188 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 247
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 248 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 307
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 308 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKA--EWSKLFDAPNFF 365
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 415
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P + +
Sbjct: 366 QKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSENT 425
Query: 416 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISV 470
+K + + +GL K+ + E D+ ++ F +QA++ M+I+
Sbjct: 426 EKEE-FRTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVYRQAINSKMFEN-EMKIAA 482
Query: 471 AHVTRRNLPNFVFPGGVRPSR 491
HV R+ L + + P V P +
Sbjct: 483 MHVKRKQL-HQLLPSHVLPKK 502
>gi|395508015|ref|XP_003758311.1| PREDICTED: poly(A) polymerase gamma [Sarcophilus harrisii]
Length = 763
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/484 (44%), Positives = 311/484 (64%), Gaps = 12/484 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 31 KHYGITSPISLASPKEIDHIYTQKLIEAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 90
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 91 ELSESKNLPPSVVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 149
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L + DA+VPV+KF+F G+ IDL++ARL++ + ++LD+ DS L++ D +
Sbjct: 150 LKHQDGIRNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIR 209
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 210 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 269
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPII
Sbjct: 270 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 329
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y
Sbjct: 330 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHY 387
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYC 423
+ + SA ++ W G VES++R L +ER+ + + +P PG+ + Y
Sbjct: 388 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYV 447
Query: 424 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNL 478
S +F+G+ ++ V E D+ ++ F V + + K GM+I HV ++ L
Sbjct: 448 SMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 506
Query: 479 PNFV 482
+++
Sbjct: 507 HHYL 510
>gi|10433147|dbj|BAB13919.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|17985991|ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster]
gi|24655907|ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster]
gi|116007728|ref|NP_001036562.1| hiiragi, isoform C [Drosophila melanogaster]
gi|7110522|gb|AAF36978.1|AF231704_1 poly A polymerase [Drosophila melanogaster]
gi|9453846|dbj|BAB03279.1| poly A polymerase [Drosophila melanogaster]
gi|21626946|gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster]
gi|21626947|gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster]
gi|25012374|gb|AAN71296.1| RE09914p [Drosophila melanogaster]
gi|113194668|gb|ABI31107.1| hiiragi, isoform C [Drosophila melanogaster]
gi|211938509|gb|ACJ13151.1| FI03258p [Drosophila melanogaster]
gi|220942518|gb|ACL83802.1| hrg-PA [synthetic construct]
gi|220952732|gb|ACL88909.1| hrg-PA [synthetic construct]
Length = 659
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 313/510 (61%), Gaps = 41/510 (8%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+ +V
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+IS +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 259
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 260 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 319
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 320 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFY 377
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 417
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 378 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQS 436
Query: 418 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 452
S P +F+GL+ ++ E D+ +++ F
Sbjct: 437 ANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 492
Query: 453 KQAVSMY----TLRKPGMQISVAHVTRRNL 478
+ V M+ + K GM I HV R+ L
Sbjct: 493 TEHVMMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|449280702|gb|EMC87938.1| Poly(A) polymerase alpha, partial [Columba livia]
Length = 736
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/481 (46%), Positives = 311/481 (64%), Gaps = 20/481 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D M T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 18 GITSPISLAAPKESDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREIS 77
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++ L +
Sbjct: 78 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQ 136
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 137 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 196
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 197 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 256
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 257 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 316
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 317 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 374
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 LASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-YRTM 433
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 434 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVKRKQ 489
Query: 478 L 478
L
Sbjct: 490 L 490
>gi|195057028|ref|XP_001995187.1| GH22767 [Drosophila grimshawi]
gi|193899393|gb|EDV98259.1| GH22767 [Drosophila grimshawi]
Length = 857
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/531 (42%), Positives = 321/531 (60%), Gaps = 51/531 (9%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWV 65
++LG+T ISLA P +DL RT +L K L N++ESQ+E R E+L +L+ +VK W+
Sbjct: 23 AKQLGMTSAISLAEPRAEDLQRTGELGKSLEPYNVFESQDELNHRMEILAKLNTLVKQWI 82
Query: 66 KKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
K+IS +K + + KI+TFGSYRLGVH GADID LCV PR+ R D+F +
Sbjct: 83 KEISVSKNMPEAAADRLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFE 141
Query: 126 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 185
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 142 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDP 201
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 202 RSVRSLNGCRVTDEILALVPNIENFRLALRAIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 261
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 305
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPI
Sbjct: 262 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 321
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
ITPAYP NS++NVS ST ++++ EF RG I + E V+WD LFE +FF Y++
Sbjct: 322 ITPAYPQQNSTFNVSESTKKVILTEFNRGMSITD--EIMLGRVNWDRLFEAPSFFYRYRH 379
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS------- 418
++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 380 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFELKKGAVTANN 438
Query: 419 ------------------------KPL-------YCS-YFMGLQRKQGVPVGEGEQFDIR 446
KP +CS +F+GL+ ++ E D+
Sbjct: 439 SQNNSGNEDDLKQQQQQQQQQKDEKPATSTVAAPFCSLWFIGLEFER----SENLNIDLT 494
Query: 447 LTVKEFKQAVSMY----TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 493
+++ F + V M+ + K GM I HV R+ L ++ ++ R S
Sbjct: 495 ESIQNFTEHVIMHGVNIKMLKEGMAIDARHVKRKQLSVYLDADFLKRERKS 545
>gi|389744511|gb|EIM85694.1| poly-A polymerase [Stereum hirsutum FP-91666 SS1]
Length = 628
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/566 (42%), Positives = 322/566 (56%), Gaps = 51/566 (9%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PIS + + T L + LR +ES+EEA +RE VLGRL +VK +V+K+
Sbjct: 8 LGVTPPISTTESSAREKEVTGTLMQELRRQKTFESEEEAKTREIVLGRLAALVKAFVRKV 67
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S ++GL++ A KIFTFGSYRLGVHGPG+DIDTLCV P+H RE DFF QML
Sbjct: 68 SLSRGLSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVLRE-DFFDVFEQMLR 126
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
E VTE VP+A+VP++K K SG+ ID L ARL+L IP+DL + D++L+N D++ +
Sbjct: 127 ETEGVTECSGVPEAYVPIVKVKISGIPIDFLMARLALSTIPDDLSLQDDNLLRNLDDRCI 186
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSL G RVTD+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQ
Sbjct: 187 RSLGGSRVTDEILRLVPNVNVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQ 246
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNA+ +VSRFF + QW WP PVLL IEEG L ++VW+P+ P D+ H MPIITP
Sbjct: 247 LYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITP 306
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP M +++NV+ ST IM +EF++G +I + + A W LF FF Y+ YL+
Sbjct: 307 AYPAMCATHNVTASTQMIMTEEFKKGADIVDKVIVGTA--TWSELFAKHDFFHKYRYYLQ 364
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC----- 423
I S + W G VESRLRQL +K+E ++ HP F S YC
Sbjct: 365 IIASTGDPALQIKWAGTVESRLRQLVMKLE-FVESLQLAHPFIKGFEQIS---YCLSEEE 420
Query: 424 ---------------------------------SYFMGL--QRKQGVPVGEGEQFDIRLT 448
++++GL + +Q VG + DI
Sbjct: 421 MRAVAQGEVSEAVAQRKKEDIEGKEGASQVYTSTFYIGLAIEARQAGSVGP-RKLDISWP 479
Query: 449 VKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRP--SKGTWDSRRALER 505
EF + V + + M I V H+ LP++VF G R +P +K S + R
Sbjct: 480 TTEFTKMVKSWDKFDETKMGIIVRHIKSSTLPDYVFDAGERQPKPALTKKRPKSVKGTTR 539
Query: 506 KVSSHTKPGADDGRKRKQTDDNVDTH 531
S P R D+V T
Sbjct: 540 PNGSSDLPANKRPRASYAGSDSVSTE 565
>gi|73969700|ref|XP_852387.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Canis lupus
familiaris]
Length = 738
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/485 (44%), Positives = 306/485 (63%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVT++IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|109102989|ref|XP_001115228.1| PREDICTED: poly(A) polymerase gamma-like [Macaca mulatta]
Length = 736
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/485 (44%), Positives = 305/485 (62%), Gaps = 14/485 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + ++ +W L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKS--NWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 478 LPNFV 482
L +++
Sbjct: 492 LHHYL 496
>gi|326921016|ref|XP_003206760.1| PREDICTED: poly(A) polymerase alpha-like [Meleagris gallopavo]
Length = 752
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/493 (46%), Positives = 315/493 (63%), Gaps = 24/493 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D M T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 31 KHYGITSPISLAAPKEIDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIR 90
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++
Sbjct: 91 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEK 149
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 150 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 209
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 210 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 269
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 270 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 329
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 330 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 387
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 388 IVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-Y 446
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 447 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVK 502
Query: 475 RRN----LPNFVF 483
R+ LPN V
Sbjct: 503 RKQLHQLLPNHVL 515
>gi|449504503|ref|XP_002200600.2| PREDICTED: poly(A) polymerase alpha [Taeniopygia guttata]
Length = 850
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/490 (46%), Positives = 314/490 (64%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D M T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 131 GITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREIS 190
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++ L +
Sbjct: 191 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQ 249
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 250 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 309
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 310 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 369
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 370 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 429
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 430 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 487
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 488 LASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-YRTM 546
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 547 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVKRKQ 602
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 603 LHQLLPNHVL 612
>gi|363731198|ref|XP_003640929.1| PREDICTED: poly(A) polymerase gamma-like [Gallus gallus]
Length = 716
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/490 (43%), Positives = 312/490 (63%), Gaps = 13/490 (2%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P D D + T+KL + + ++E +EE R VL +L+ +VK W+ ++
Sbjct: 19 GITSPISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNLVKEWIFELG 78
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ +IFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 79 ESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKH 137
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
E+ L V DA+VPV+KF+F G+ IDL++ARL + + ++LD+ DS L++ D + +R
Sbjct: 138 QEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIRCIR 197
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP +NF+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL
Sbjct: 198 SLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 257
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
+PNA+ S LV +FF ++++W WPNPVLL EE +L L VWDPR NP D+YH+MPIITPA
Sbjct: 258 HPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPA 317
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVSTST ++++E + G + + + + DW LFE FF+ YK+Y+ +
Sbjct: 318 YPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRS--DWPKLFEQPNFFQKYKHYIVL 375
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-Y 425
S + W G VES++R L +ER+ + N+ +P PG+ + Y S +
Sbjct: 376 TASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYVSMW 435
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNF 481
F+G+ ++ + E + D+ ++ F AV + + K GM+I A+V R++L ++
Sbjct: 436 FLGIIFRK-LESAESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHL-HY 493
Query: 482 VFPGGVRPSR 491
P G R
Sbjct: 494 FLPAGTLQKR 503
>gi|327259110|ref|XP_003214381.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Anolis carolinensis]
Length = 771
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/481 (46%), Positives = 310/481 (64%), Gaps = 20/481 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P ++D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 52 GITSPISLAAPKENDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 111
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++ L
Sbjct: 112 EIKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKL 170
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 171 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 230
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 231 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 290
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 291 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 350
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 351 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 408
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 409 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 467
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV RR
Sbjct: 468 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRRQ 523
Query: 478 L 478
L
Sbjct: 524 L 524
>gi|310750335|ref|NP_001185530.1| poly(A) polymerase alpha [Gallus gallus]
Length = 737
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/490 (46%), Positives = 314/490 (64%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D M T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 20 GITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREIS 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++ L +
Sbjct: 80 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQ 138
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 139 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 198
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 258
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 259 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 319 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 376
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 377 LASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-YRTM 435
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 436 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVKRKQ 491
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 492 LHQLLPNHVL 501
>gi|345325876|ref|XP_001511509.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Ornithorhynchus anatinus]
Length = 740
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 313/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 22 GITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++ L
Sbjct: 82 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKL 140
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 261 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 321 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 378
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 379 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 437
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 438 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRKQ 493
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 494 LHQLLPNHVL 503
>gi|354482269|ref|XP_003503321.1| PREDICTED: poly(A) polymerase alpha [Cricetulus griseus]
Length = 742
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/493 (46%), Positives = 312/493 (63%), Gaps = 24/493 (4%)
Query: 2 GSSNGQ----RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRL 57
GS Q GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L
Sbjct: 12 GSQQAQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 71
Query: 58 DQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREE 117
+ +VK W+++IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R
Sbjct: 72 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS- 130
Query: 118 DFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
DFF + L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ D
Sbjct: 131 DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDD 190
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
S+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG+
Sbjct: 191 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 250
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
+WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP
Sbjct: 251 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 310
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE
Sbjct: 311 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAP 368
Query: 358 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPG 412
FF+ YK+Y+ + SA W G VES++R L +E++ + L Q P P
Sbjct: 369 NFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPK 428
Query: 413 DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPG 465
+ DK + + +GL K+ E D+ ++ F +QA++ M+ L
Sbjct: 429 ENPDKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---D 483
Query: 466 MQISVAHVTRRNL 478
M+I+ HV R+ L
Sbjct: 484 MKIAAMHVKRKQL 496
>gi|148233493|ref|NP_001083620.1| poly(A) polymerase alpha-B [Xenopus laevis]
gi|38303906|gb|AAH61931.1| Pap protein [Xenopus laevis]
Length = 731
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/500 (45%), Positives = 315/500 (63%), Gaps = 16/500 (3%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
GS Q+ GIT PISLA P D D T+KL + L+ ++E ++E R +LG+L+ +
Sbjct: 9 GSQQSQKTYGITSPISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILILGKLNNL 68
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK W+++IS K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF
Sbjct: 69 VKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFF 127
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L
Sbjct: 128 SSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 187
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N D + +RSLNGCRVTD+IL LVP I +FR TLR ++ WAKR +YSN+ GFLGG++WA
Sbjct: 188 KNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 247
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 248 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 307
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 308 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKA--EWSKLFDAPNFF 365
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 415
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P + S
Sbjct: 366 QKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSENS 425
Query: 416 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVA 471
+K + + +GL K+ + E D+ ++ F V + + M+I+
Sbjct: 426 EKEE-FRTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVYRQAINSKMFETEMKIAAM 483
Query: 472 HVTRRNLPNFVFPGGVRPSR 491
HV R+ L + + P V P +
Sbjct: 484 HVKRKQL-HQLLPSHVLPKK 502
>gi|326914719|ref|XP_003203670.1| PREDICTED: poly(A) polymerase gamma-like [Meleagris gallopavo]
Length = 860
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/490 (43%), Positives = 314/490 (64%), Gaps = 13/490 (2%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PISLA P D D + T+KL + + ++E +EE R VL +L+ +VK W+ ++
Sbjct: 157 GVTSPISLAPPKDIDYIHTQKLVEVMESFGVFEDEEELNHRLVVLCKLNNLVKEWIFELG 216
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ +IFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 217 ESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKH 275
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
E+ L V DA+VPV+KF+F G+ IDLL+ARL + + ++LD+ DS L++ D + +R
Sbjct: 276 QEEIKNLRAVEDAYVPVVKFEFDGIEIDLLFARLPVQTVSDNLDLRDDSRLRSLDIRCIR 335
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP +NF+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL
Sbjct: 336 SLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 395
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
+PNA+ S LV++FF ++++W WPNPVLL EE +L L VWDPR NP D+YH+MPIITPA
Sbjct: 396 HPNALASTLVNKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPA 455
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVSTST ++++E + G + + + ++ DW LFE FF+ YK+Y+ +
Sbjct: 456 YPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGKS--DWPKLFEQPNFFQKYKHYIVL 513
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-Y 425
S + W G VES++R L +ER+ + N+ +P PG+ + Y S +
Sbjct: 514 TASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYVSMW 573
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNF 481
F+G+ ++ + E + D+ ++ F AV + + K GM+I A+V R++L ++
Sbjct: 574 FLGIIFRK-LENTESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHL-HY 631
Query: 482 VFPGGVRPSR 491
P G R
Sbjct: 632 FLPAGTLQKR 641
>gi|344274222|ref|XP_003408916.1| PREDICTED: poly(A) polymerase alpha-like [Loxodonta africana]
Length = 739
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/490 (46%), Positives = 312/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T++L + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLATPKETDCVLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P D DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKDNPDKEE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV RR
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRRQ 492
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 493 LHQLLPNHVL 502
>gi|74210049|dbj|BAE21312.1| unnamed protein product [Mus musculus]
Length = 739
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 309/481 (64%), Gaps = 20/481 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + D+ +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+
Sbjct: 437 WVIGLVLKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQ 492
Query: 478 L 478
L
Sbjct: 493 L 493
>gi|395329948|gb|EJF62333.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 606
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/564 (43%), Positives = 331/564 (58%), Gaps = 54/564 (9%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M S+NG LG+T PIS + + T L + LR ++ES+EEA RE VLGRL +
Sbjct: 1 MASTNGY-LGVTPPISTSESNPREKEVTVTLLEELRRQGIFESEEEAKMREIVLGRLAAL 59
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+K +VK++S A+GL++ A KI+TFGSYRLGVHGPG DIDTLCV PRH TRE DFF
Sbjct: 60 IKKFVKRVSLARGLSESAANSAGGKIYTFGSYRLGVHGPGTDIDTLCVVPRHVTRE-DFF 118
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
L ML EM VTE+ VP+A VP++K + SG+ IDLL+A+LSL IP+DLD+ D++L
Sbjct: 119 NVLEGMLREMEGVTEVSGVPEAFVPIIKTEISGIPIDLLFAQLSLAAIPDDLDLRDDNLL 178
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N DE+ VRSLNG RV ++ILRLVP + FR LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 179 KNLDERCVRSLNGSRVINEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWA 238
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVARICQLYPNAV +VSRFF + +W WP PVLL IE+G L ++VW+PR P+D+
Sbjct: 239 MLVARICQLYPNAVAGAIVSRFFIIMHRWSWPQPVLLKPIEDGPLQVRVWNPRLYPQDRN 298
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M +++NV ST +IM +EF+RG EI + + E V W LF FF
Sbjct: 299 HRMPIITPAYPSMCATHNVMASTQQIMTEEFKRGSEIVDQVISGE--VQWSALFAKHDFF 356
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF------ 414
Y+ YL++ S+ + D W G VES++RQL +++E + HP F
Sbjct: 357 FRYRFYLQVIASSPDLDTQNKWSGTVESKIRQLVMRLE-FVDTLKLAHPFIKGFDTVYYC 415
Query: 415 ----------------------------SDKSKPLYC-SYFMGLQRKQGVPVGEG-EQFD 444
+ + +Y S+F+GL K G + D
Sbjct: 416 LSEDETRAVARGEIPEAVANRKQEDIAGKEGATTMYTKSFFVGLSIKPKEAGATGPRKLD 475
Query: 445 IRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVR--PSRPSKGTWDSRR 501
I EF + V ++ + M I V H+ LP+FVF G R +RP K
Sbjct: 476 ISYPTNEFIKMVRLWEKYDESQMNIVVRHIKHTALPDFVFDKGEREAAARPKK------- 528
Query: 502 ALERKVSSHTKPGADDGRKRKQTD 525
R ++ P R R ++D
Sbjct: 529 ---RSRTAKESPAPSAKRSRMESD 549
>gi|148686800|gb|EDL18747.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
gi|148686803|gb|EDL18750.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
Length = 736
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 309/481 (64%), Gaps = 20/481 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 18 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 77
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 78 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 136
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 137 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 196
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 197 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 256
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 257 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 316
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 317 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 374
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + D+ +
Sbjct: 375 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTM 433
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+
Sbjct: 434 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQ 489
Query: 478 L 478
L
Sbjct: 490 L 490
>gi|21914853|ref|NP_035242.1| poly(A) polymerase alpha [Mus musculus]
gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase
gi|21623967|dbj|BAC00996.1| polyA polymerase [Mus musculus]
gi|162318632|gb|AAI56655.1| Poly (A) polymerase alpha [synthetic construct]
Length = 739
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 309/481 (64%), Gaps = 20/481 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + D+ +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQ 492
Query: 478 L 478
L
Sbjct: 493 L 493
>gi|28207949|emb|CAD62628.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/490 (46%), Positives = 307/490 (62%), Gaps = 18/490 (3%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 45 KHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 104
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 105 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 163
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 164 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 223
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 224 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 283
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 284 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 343
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 344 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 401
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 402 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 460
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F V + M+I+ HV R+
Sbjct: 461 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQ 519
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 520 LHQLLPNHVL 529
>gi|388454164|ref|NP_001252826.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809034|gb|AFE76392.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809036|gb|AFE76393.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411427|gb|AFH28927.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411429|gb|AFH28928.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944936|gb|AFI36073.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944940|gb|AFI36075.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 745
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 313/493 (63%), Gaps = 24/493 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 18 KHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 475 RRN----LPNFVF 483
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|395504561|ref|XP_003756616.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 739
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 312/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISL P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLVAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++ L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV RR
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRRQ 492
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 493 LHQLLPNHVL 502
>gi|281345200|gb|EFB20784.1| hypothetical protein PANDA_017098 [Ailuropoda melanoleuca]
Length = 736
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 313/493 (63%), Gaps = 24/493 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 15 KHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 74
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 75 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 133
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 134 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 193
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 194 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 253
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 313
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 314 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 371
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 372 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 430
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 431 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 486
Query: 475 RRN----LPNFVF 483
R+ LPN V
Sbjct: 487 RKQLHQLLPNHVL 499
>gi|332226879|ref|XP_003262619.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma [Nomascus
leucogenys]
Length = 735
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/488 (43%), Positives = 306/488 (62%), Gaps = 16/488 (3%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYC 423
+ + SA ++ W G VES++R L +ER+ + + +P PG+ Y
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV 433
Query: 424 SYFM---------GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 474
S + + + V + + + T ++QA ++ L++ GM+I HV
Sbjct: 434 SMWFPWDNFSESRKXENAESVNIXXXQSYIQSFTDTVYRQANNINMLKE-GMKIEATHVK 492
Query: 475 RRNLPNFV 482
++ L +++
Sbjct: 493 KKQLHHYL 500
>gi|355693555|gb|EHH28158.1| hypothetical protein EGK_18525, partial [Macaca mulatta]
gi|355778841|gb|EHH63877.1| hypothetical protein EGM_16936, partial [Macaca fascicularis]
Length = 745
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 313/493 (63%), Gaps = 24/493 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 18 KHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 475 RRN----LPNFVF 483
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|126290553|ref|XP_001375249.1| PREDICTED: poly(A) polymerase alpha-like [Monodelphis domestica]
Length = 738
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 312/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + +KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCILAQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++ L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV RR
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRRQ 492
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 493 LHQLLPNHVL 502
>gi|390469486|ref|XP_002754311.2| PREDICTED: poly(A) polymerase alpha isoform 1 [Callithrix jacchus]
Length = 745
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 313/493 (63%), Gaps = 24/493 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 18 KHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 475 RRN----LPNFVF 483
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|149737664|ref|XP_001489128.1| PREDICTED: poly(A) polymerase alpha-like [Equus caballus]
Length = 755
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 312/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 37 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 96
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 97 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 155
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 156 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 215
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 216 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 275
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 276 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 335
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 336 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 393
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 394 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 452
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 453 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 508
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 509 LHQLLPNHVL 518
>gi|194379500|dbj|BAG63716.1| unnamed protein product [Homo sapiens]
Length = 761
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 313/493 (63%), Gaps = 24/493 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 34 KHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 93
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 94 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 152
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 153 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 212
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 213 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 272
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 273 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 332
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 333 TPAYPQQNSTYNVSVSTRMVMVEEFKQGPAITDEILLSKA--EWSKLFEAPNFFQKYKHY 390
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 391 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 449
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 450 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 505
Query: 475 RRN----LPNFVF 483
R+ LPN V
Sbjct: 506 RKQLHQLLPNHVL 518
>gi|301783837|ref|XP_002927334.1| PREDICTED: poly(A) polymerase alpha-like [Ailuropoda melanoleuca]
Length = 739
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 313/493 (63%), Gaps = 24/493 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 475 RRN----LPNFVF 483
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|32490557|ref|NP_116021.2| poly(A) polymerase alpha isoform 1 [Homo sapiens]
gi|332843097|ref|XP_003314562.1| PREDICTED: poly(A) polymerase alpha [Pan troglodytes]
gi|426377955|ref|XP_004055715.1| PREDICTED: poly(A) polymerase alpha [Gorilla gorilla gorilla]
gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|23271194|gb|AAH36014.1| Poly(A) polymerase alpha [Homo sapiens]
gi|119602048|gb|EAW81642.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|119602050|gb|EAW81644.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|306921445|dbj|BAJ17802.1| poly(A) polymerase alpha [synthetic construct]
gi|410307962|gb|JAA32581.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351881|gb|JAA42544.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351883|gb|JAA42545.1| poly(A) polymerase alpha [Pan troglodytes]
Length = 745
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 313/493 (63%), Gaps = 24/493 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 18 KHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 475 RRN----LPNFVF 483
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|410962897|ref|XP_003988005.1| PREDICTED: poly(A) polymerase alpha [Felis catus]
Length = 739
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 312/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 492
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 493 LHQLLPNHVL 502
>gi|194379056|dbj|BAG58079.1| unnamed protein product [Homo sapiens]
Length = 740
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 312/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 37 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 96
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 97 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 155
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 156 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 215
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 216 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 275
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 276 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 335
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 336 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 393
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 394 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 452
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 453 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 508
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 509 LHQLLPNHVL 518
>gi|440899282|gb|ELR50609.1| Poly(A) polymerase alpha, partial [Bos grunniens mutus]
Length = 736
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 309/481 (64%), Gaps = 20/481 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 18 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 77
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 78 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 136
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 137 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 196
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 197 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 256
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 257 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 316
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 317 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 374
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 433
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 434 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 489
Query: 478 L 478
L
Sbjct: 490 L 490
>gi|426248569|ref|XP_004018035.1| PREDICTED: poly(A) polymerase alpha [Ovis aries]
Length = 739
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 309/481 (64%), Gaps = 20/481 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 492
Query: 478 L 478
L
Sbjct: 493 L 493
>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, isoform CRA_f [Homo sapiens]
Length = 744
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 313/493 (63%), Gaps = 24/493 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 18 KHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 475 RRN----LPNFVF 483
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|380809032|gb|AFE76391.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383415357|gb|AFH30892.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944938|gb|AFI36074.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 724
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 312/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 492
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 493 LHQLLPNHVL 502
>gi|116283528|gb|AAH16738.1| PAPOLG protein [Homo sapiens]
Length = 496
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/476 (45%), Positives = 300/476 (63%), Gaps = 14/476 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILYLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 473
+F+G+ ++ V E D+ ++ F V + + K GM+I HV
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHV 487
>gi|395827780|ref|XP_003787073.1| PREDICTED: poly(A) polymerase alpha [Otolemur garnettii]
Length = 740
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 313/493 (63%), Gaps = 24/493 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 18 KHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 475 RRN----LPNFVF 483
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|28603760|ref|NP_788820.1| poly(A) polymerase alpha [Bos taurus]
gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|605|emb|CAA43782.1| polynucleotide adenylyltransferase [Bos taurus]
gi|296475173|tpg|DAA17288.1| TPA: poly(A) polymerase alpha [Bos taurus]
Length = 739
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 309/481 (64%), Gaps = 20/481 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 492
Query: 478 L 478
L
Sbjct: 493 L 493
>gi|157820829|ref|NP_001101526.1| poly(A) polymerase alpha [Rattus norvegicus]
gi|149044213|gb|EDL97595.1| poly (A) polymerase alpha (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 739
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 309/481 (64%), Gaps = 20/481 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + D+ +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQ 492
Query: 478 L 478
L
Sbjct: 493 L 493
>gi|194038370|ref|XP_001929110.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Sus scrofa]
Length = 739
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 312/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 492
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 493 LHQLLPNHVL 502
>gi|148686802|gb|EDL18749.1| poly (A) polymerase alpha, isoform CRA_c [Mus musculus]
Length = 729
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 309/481 (64%), Gaps = 20/481 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 18 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 77
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 78 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 136
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 137 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 196
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 197 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 256
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 257 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 316
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 317 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 374
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + D+ +
Sbjct: 375 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTM 433
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+
Sbjct: 434 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQ 489
Query: 478 L 478
L
Sbjct: 490 L 490
>gi|345804115|ref|XP_537551.3| PREDICTED: poly(A) polymerase alpha [Canis lupus familiaris]
Length = 832
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 312/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 114 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 173
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 174 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 232
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 233 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 292
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 293 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 352
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 353 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 412
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 413 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 470
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 471 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 529
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 530 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 585
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 586 LHQLLPNHVL 595
>gi|397526096|ref|XP_003832975.1| PREDICTED: poly(A) polymerase alpha, partial [Pan paniscus]
Length = 804
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 312/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 80 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 139
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 140 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 198
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 199 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 258
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 259 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 318
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 319 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 378
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 379 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 436
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 437 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 495
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 496 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 551
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 552 LHQLLPNHVL 561
>gi|145354311|ref|XP_001421431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145354383|ref|XP_001421465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581668|gb|ABO99724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581702|gb|ABO99758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 598
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/541 (42%), Positives = 324/541 (59%), Gaps = 38/541 (7%)
Query: 20 PTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLL 79
PT D ++ L+ LR+ ++YE +E V REEVLG ++ +++ WV S KG+ + +
Sbjct: 31 PTAFDEKLSKALDDKLREEDVYEDADECVRREEVLGEINALLQDWVLAASERKGITEDMR 90
Query: 80 QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG--------ELHQMLTEMP 131
N ++TFGSYRLGVHGP ADIDTLC+GPRH +REEDFFG + ++ + P
Sbjct: 91 PSCN--LYTFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGWDENDYEGSFYDVMRKHP 148
Query: 132 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADEQTVRS 190
+ PV DA VP +K F G ID+ Y L + +PEDLD+ Q S++ N D+ V+S
Sbjct: 149 GTESIVPVRDAIVPEIKLVFRGFEIDMAYTSLPSYTHVPEDLDVCQTSVMMNLDDPGVKS 208
Query: 191 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 250
LNGCRV DQ+LR+VP FR LR +R WA+RRGVYSNV GF GG+N A+LVAR+CQLY
Sbjct: 209 LNGCRVADQLLRVVPNHDAFRVALRTLRLWAQRRGVYSNVVGFFGGVNLAILVARVCQLY 268
Query: 251 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-EEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
PNA PSMLV FF++++ W+W PV+L I +EG G++VWD R N ++Y LM I+TPA
Sbjct: 269 PNAAPSMLVYSFFQLWSAWQWTTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKILTPA 328
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS++NVS STL ++ EF+RG E+ + + N A W+ L+ F E YK+YL +
Sbjct: 329 YPAQNSTFNVSVSTLEVLKAEFKRGKEVTKMILLNTA--KWEQLWCSLNFLEKYKHYLMV 386
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD--KSKPLYCSYFM 427
ISA+N DD + W+GWV SR++ L IE T + HP + D K + + + F+
Sbjct: 387 TISAKNEDDFKKWEGWVGSRIKLLIQGIENATGGQMLAHPGTSRYKDPEKDENSHVTLFL 446
Query: 428 GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK-------PGMQISVAHVTRRNLPN 480
GL E ++ V++F+ V+ + R PGMQ +V ++ R++LP+
Sbjct: 447 GLFPSSLKKKEEKVSLNLNPAVEQFQMTVTSWMDRATGESNWVPGMQANVKYLKRKDLPS 506
Query: 481 FV---FPGGVR----PSRPSKGTWDSRRALERKVSSHTK-PGADD---GRKRK--QTDDN 527
FV G V+ P + K S E+K+S P DD RKRK Q DD+
Sbjct: 507 FVKEEIDGYVKDIYAPEKEKKAA--SAEDEEKKISEEKPLPLGDDTKAARKRKEMQEDDS 564
Query: 528 V 528
+
Sbjct: 565 I 565
>gi|393246171|gb|EJD53680.1| polymerase [Auricularia delicata TFB-10046 SS5]
Length = 610
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 245/582 (42%), Positives = 341/582 (58%), Gaps = 49/582 (8%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G S LG+T PIS AGP+ + T L + LRD N +ES+EEA +RE VLGR+ +V
Sbjct: 4 GESTPTYLGVTPPISTAGPSKREEEVTVTLMQELRDQNRFESEEEARTREIVLGRVSALV 63
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
+ +V K+S A+G+++ Q A KIFT+GSYRLGVHGPG+DIDTLCV P+H RE DFF
Sbjct: 64 RKFVYKVSIARGMSETAAQAAGGKIFTYGSYRLGVHGPGSDIDTLCVVPKHVNRE-DFFD 122
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
ML E+ V E+ VP+A+VP++K K S + +DL++AR++L + +DLD+S D+IL+
Sbjct: 123 VFEPMLRELEGVAEVSGVPEAYVPIIKTKISDIPLDLVFARVALSSVNDDLDLSDDNILR 182
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N DE+ VRSL G R+TD+ILRLVP FR LRC++ WA+RR +YSNV GFLGG+ WA+
Sbjct: 183 NLDERCVRSLGGSRMTDEILRLVPNQAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAM 242
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVARICQLYPNA ++VSRFF + +W+WPNPVLL IEEG L ++VW+P+ P D+ H
Sbjct: 243 LVARICQLYPNANAGVIVSRFFIIMREWKWPNPVLLKQIEEGPLQVRVWNPKLYPSDRAH 302
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPIITP YP M S++NVS ST I+ E +R EI + + A W LF FF
Sbjct: 303 RMPIITPNYPSMCSTHNVSQSTQMIIKHELRRASEIVDRIIMGSA--TWSELFAKHDFFH 360
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF------- 414
Y+ YL++ S ENAD W G VESRLRQL +K+E + +++ HP F
Sbjct: 361 KYRYYLQVIASTENADLQLKWAGTVESRLRQLVMKLE-YVDSLVLAHPFIKGFDQTHYLL 419
Query: 415 ---------------------------SDKSKPLYCSYF---MGLQRKQGVPVGEGEQFD 444
D ++ +Y + F + ++ KQ VG + D
Sbjct: 420 TEEEVRFVAQGFVSDVISKRTKEDIEGKDGAQIVYTTTFYIGLAIEPKQPGAVGP-RKLD 478
Query: 445 IRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRA 502
I EF + V M+ M I V H+ LP++VF P +P + K T S
Sbjct: 479 ISYPTAEFTKLVKMWENFDDSKMGIVVRHIKSTMLPDYVFDPSERQPKQQLKRTKSS--- 535
Query: 503 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 544
+ S++ D K++++ N+ R+ + +P S
Sbjct: 536 --KSTSNNADASPDMPNKKRRSSLNMSETPRSESALSALPPS 575
>gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos taurus]
Length = 693
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/484 (46%), Positives = 310/484 (64%), Gaps = 20/484 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 475 RRNL 478
R+ L
Sbjct: 490 RKQL 493
>gi|443716054|gb|ELU07731.1| hypothetical protein CAPTEDRAFT_223399 [Capitella teleta]
Length = 657
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/476 (43%), Positives = 311/476 (65%), Gaps = 10/476 (2%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G + G+T P+SLA P + DL ++KLEK + ++E++EE R EVL +++ +V
Sbjct: 12 GDGQKKYPGVTSPLSLAPPKEHDLELSKKLEKEMAPYGVFETEEEQAHRMEVLNKVNILV 71
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K W++ +S +K + + L++ ++TFGSYRLGV+ GADIDTLCV PRH R DFFG
Sbjct: 72 KAWIRDVSLSKSMPESLIEVVGGGVYTFGSYRLGVNTKGADIDTLCVAPRHVLRS-DFFG 130
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
+ L + PEV + V +A VPV+K +F G+ +D+L+ARL+L V+ E+ ++ +S+L+
Sbjct: 131 SFFESLKQHPEVKDCRAVEEAFVPVIKMEFDGIELDMLFARLALQVVEENQNLRDESLLK 190
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D + +RSLNGCRVTD+IL LVP I++FR TLR ++ WAK++G+YSN GFLGG++WA+
Sbjct: 191 NLDIRCIRSLNGCRVTDEILHLVPNIESFRMTLRAVKLWAKKKGIYSNALGFLGGVSWAM 250
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-EEGSLGLQVWDPRRNPKDKY 300
LVAR CQLYP+A P+ L+ +FF ++++W WP PVLL + +E L VWDPR N D++
Sbjct: 251 LVARTCQLYPHACPATLLQKFFMLFSKWDWPAPVLLKQMSDENKLSHTVWDPRVNVSDRF 310
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP NS+YNVS ST +IMMDEF+ + + N+ +W +LF+P FF
Sbjct: 311 HLMPIITPAYPQQNSTYNVSNSTRQIMMDEFKEALVVANNVYANKD--EWGSLFQPSDFF 368
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---SDK 417
+ YK+Y+ + ++ D W G VES++R L +E++ + + H +P F D
Sbjct: 369 QKYKHYIVLVARSDTEDHQLEWVGLVESKIRILVGNLEKNPF-ICIAHVNPKSFGPNEDD 427
Query: 418 SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVK-EFKQAVSMYTLRKPGMQISVAH 472
P +F+GL K G +DI+ + ++QA+++ L+K GM++ V H
Sbjct: 428 ESPYIAKWFVGLIFKTGTQTNIDLTYDIQNFMDIVYRQALTINLLKK-GMEVEVKH 482
>gi|340376009|ref|XP_003386526.1| PREDICTED: poly(A) polymerase gamma-like [Amphimedon queenslandica]
Length = 689
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/490 (45%), Positives = 313/490 (63%), Gaps = 16/490 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS A P D+ T LE L+ ++++ E R VLG+L+++VK W+ IS
Sbjct: 11 GVTGPISTAVPKPQDIKLTNLLEACLQKYGVFDTPEGQKHRLLVLGKLNELVKKWIIDIS 70
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ KG ++ +E IFTFGSYRLGVHG GADIDTL V PRH R DFF ++L E
Sbjct: 71 KEKGKSEAEAKEVGGTIFTFGSYRLGVHGKGADIDTLLVAPRHIERT-DFFSSFKELLFE 129
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
VT + VPDA VPV+K +F GV +DLL+ARL+L VIP+ L + S+L+N D + VR
Sbjct: 130 AKNVTNVRAVPDAFVPVIKLEFDGVEMDLLFARLALPVIPDGLGLLDMSLLKNLDAKCVR 189
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD IL+LVP + FR LR ++ WAKRRG+YSN G+LGG++WA+LVAR CQL
Sbjct: 190 SLNGCRVTDSILKLVPNQETFRLALRAIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQL 249
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLG--LQVWDPRRNPKDKYHLMPIIT 307
YPNA S +V +FF V+ +W WP PVLL EE LG LQVW+P+ NP D +HLMPIIT
Sbjct: 250 YPNAASSTIVLKFFFVFEKWNWPQPVLLRKAEEDVLGLNLQVWNPQVNPGDAHHLMPIIT 309
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
PAYP NS++NV+ ST +M++EF+RG +IC ++ + + WD LFEP FF YK+Y+
Sbjct: 310 PAYPQQNSTFNVTKSTRDVMLNEFRRGLDICRDIDVGK--LSWDILFEPIKFFSLYKHYI 367
Query: 368 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS---DKSKPLYCS 424
I +A ++D L W G VES++R L K+E + N+ H +P + S +
Sbjct: 368 VICATAIDSDLLLKWSGLVESKIRILIGKLEDNE-NIKIAHVNPTSYPRIVPDSTDSHLM 426
Query: 425 YFMGLQRKQGVPVGEG--EQFDIRLTVKEFKQAVSMYT---LRKPGMQISVAHVTRRNLP 479
+F+GL+ G P G ++I++ + ++ ++ + LR G Q+ V H RR+L
Sbjct: 427 WFIGLEFCVG-PGGVNITLTYEIQMFINSVVKSPALQSSPDLRN-GTQLDVKHARRRDLS 484
Query: 480 NFVFPGGVRP 489
+++ P V P
Sbjct: 485 DYLSPDIVPP 494
>gi|409050023|gb|EKM59500.1| hypothetical protein PHACADRAFT_250043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 556
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/562 (42%), Positives = 327/562 (58%), Gaps = 47/562 (8%)
Query: 3 SSNG--QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
S+NG LG+T PIS+ + + + T L + LR +ES+EE+ +RE VLGRL +
Sbjct: 2 STNGAPTYLGVTPPISVNESNEREKLVTVSLMEELRRQGTFESEEESKTREIVLGRLASL 61
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+K +V KIS GL++ A KIFTFGSYRLGVHGPG DIDTLCV P+H +RE DFF
Sbjct: 62 IKKFVHKISLQHGLSEAAADAAGGKIFTFGSYRLGVHGPGTDIDTLCVVPKHVSRE-DFF 120
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
L ML E VTE+ VP+A+VP++ K SG+ IDL ARL+L IP+DL + D++L
Sbjct: 121 EALEPMLRETEGVTEVTGVPEAYVPIVTTKISGIPIDLTMARLALSSIPDDLTLQDDNLL 180
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N DE+ +RSLNG RVTD+ILRLVP ++ FR LRC++ WA+++ +YSNV GFLGG+ WA
Sbjct: 181 RNLDERCIRSLNGSRVTDEILRLVPNVEVFRDALRCIKLWAQKKAIYSNVNGFLGGVAWA 240
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVARICQLYP+AV +VSRFF + QW WP PVLL IE+G L ++VW+PR P D+
Sbjct: 241 MLVARICQLYPSAVAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPRLYPADRS 300
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M +++NVS ST IM +EF++G EI E + W LF FF
Sbjct: 301 HRMPIITPAYPSMCATHNVSQSTQMIMTEEFKKGSEIVEKVIM--GTTQWSELFVKHDFF 358
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH---------- 410
Y+ YL++ S + D W G VESR+RQL +K+E + ++ HP
Sbjct: 359 HKYRYYLQVIASTGDPDLHIKWAGTVESRIRQLVMKLE-YVDSLTLAHPFVKGFEQVTHC 417
Query: 411 ----------PGDFSDK--------------SKPLYCSYF---MGLQRKQGVPVGEGEQF 443
G+ SD + +Y + F + ++ KQ VG +
Sbjct: 418 LTDDEVRDAAQGEISDAIAKRKKEDIEGKEGASVVYSTTFYIGLAIEPKQAGAVGP-RRL 476
Query: 444 DIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA 502
DI EF + V M+ + M I V H+ LP+ VF G R +P + A
Sbjct: 477 DISYPTTEFTKQVKMWEKYDESAMGIVVRHIKSTALPDHVFDEGER--QPRSALKRPKTA 534
Query: 503 LERKVSSHTKPGADDGRKRKQT 524
SS+T P ++R T
Sbjct: 535 KGSGKSSNTSPDVPHKKRRLVT 556
>gi|303282577|ref|XP_003060580.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458051|gb|EEH55349.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 656
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/482 (44%), Positives = 297/482 (61%), Gaps = 25/482 (5%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEAN 83
D+ + +LE L N++ES EE REEVLG +++ ++ WVK S AKG+ + L E
Sbjct: 2 DVKLSAELEARLHLENVFESPEECARREEVLGEINEALQEWVKAASAAKGIEEDL--EPR 59
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE--------LHQMLTEMPEVTE 135
++TFGSYRLGVHGP ADIDTLC+GPRH +R EDFFG + + P
Sbjct: 60 CNLYTFGSYRLGVHGPAADIDTLCIGPRHLSRSEDFFGSEWTEYEGSFYLAMKNHPGTDR 119
Query: 136 LHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGC 194
+ VPDA VP +K F G +D+ Y L S +PEDLD+ Q SILQN D+ +V+SLNGC
Sbjct: 120 IVAVPDAVVPELKLIFRGFEVDMAYTSLPSFIAVPEDLDVCQTSILQNLDDASVKSLNGC 179
Query: 195 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 254
RV DQ+LRLVP +FR LR +R WA+ RGVYSNV GF GG+N A+LVAR+CQLYPNA
Sbjct: 180 RVADQLLRLVPNHASFRIALRALRVWARERGVYSNVQGFFGGVNLAILVARVCQLYPNAA 239
Query: 255 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMN 314
SMLV FF+++ W+W PV+L AI + GL+VWD R N +++ LM IITPAYP N
Sbjct: 240 ASMLVYSFFQLWDAWQWTTPVMLTAIIDEGHGLRVWDERVNKAERFQLMKIITPAYPAQN 299
Query: 315 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE 374
S++NV+ STL ++ EF+RG E C + + W++L+EP FF +K+YL++ + A
Sbjct: 300 STFNVTHSTLHVLKREFKRGRETCAKILMGQ--TKWESLWEPLPFFTMHKHYLQVTMCAI 357
Query: 375 NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK--PLYCSYFMGLQRK 432
DD + W+GWV SRLR L +E + L HP+P D +K L+C Y++GL
Sbjct: 358 TEDDFKKWEGWVHSRLRMLVQAVETCSGGALIAHPYPERKQDPAKDSALHCIYYIGLGPA 417
Query: 433 QGVPVGEGEQ---FDIRLTVKEFKQAVSMYTLR-------KPGMQISVAHVTRRNLPNFV 482
G ++ V++F+ V+ + R +PGM++ V H+ R+++P +
Sbjct: 418 PPPTTGGPAPRGTLNLNPAVEQFQMLVTSWVNRADGTVQWQPGMEVHVKHMKRKDVPAWA 477
Query: 483 FP 484
P
Sbjct: 478 IP 479
>gi|403173934|ref|XP_003332965.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170759|gb|EFP88546.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 671
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/550 (43%), Positives = 328/550 (59%), Gaps = 47/550 (8%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
GS+ + G+T ISL T + T L + L+ N++ES EEA +RE VLGRLD +V
Sbjct: 9 GSTPSRTYGVTGAISLQPATKPEQQLTVSLMEELKRRNIFESPEEARAREIVLGRLDVLV 68
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K +V +S + G+++ + +++ KIFTFGSYRLGVHGPGADIDTLCV PRH TRE FF
Sbjct: 69 KQFVINVSISLGMSEAVARDSGGKIFTFGSYRLGVHGPGADIDTLCVVPRHITREH-FFE 127
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
L ML + PEVTEL VP+A VP++K KFS + +DLL+ARL+L IP+ L++ D++L+
Sbjct: 128 VLPAMLNDRPEVTELATVPEAFVPIIKLKFSSIEVDLLFARLALPSIPDSLELIDDALLK 187
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D++ VRSL G RVTD+ILRLVP + FR +LR ++ WAK R VYSNV GF GG+ WA+
Sbjct: 188 NLDDRCVRSLGGSRVTDEILRLVPDVTVFRDSLRAIKLWAKSRAVYSNVMGFCGGVAWAM 247
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDK 299
VAR+CQLYPN +V+RFF V +QW WP+PVLL I G G Q +W+P+ P+D+
Sbjct: 248 CVARVCQLYPNKPAGTIVNRFFAVLSQWNWPSPVLLKPIGPGPPGDQRRIWNPKIYPQDR 307
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
H MPIITPAYPCM S++N++ ST +IMM EF+RG + + E W LF+ F
Sbjct: 308 GHRMPIITPAYPCMCSTHNITKSTAQIMMTEFKRGLAVTD--EIATGTKPWAALFDKHDF 365
Query: 360 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKI----------------ERHTYN 403
F Y+ YL+I S+ NA+ W G VE+RLRQL +K+ ER +Y
Sbjct: 366 FTRYRYYLQITASSPNAEIQLKWAGTVEARLRQLVMKVEEVETVDLAHPFIKGFERESYY 425
Query: 404 M-------LQCHPHPGDFSDK----------SKPLYC-SYFMGLQRKQGVPVGEG--EQF 443
+ +Q P D + S +Y S+F+GL Q P G +
Sbjct: 426 LTSDEVRAIQVGDVPPDVKGRTLADIEGKEGSGAVYTSSFFIGLL-VQPKPAGHTGPRKL 484
Query: 444 DIRLTVKEFKQAVSMYT-LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA 502
DI V EF + V + + M I V ++ LP++VF G RPS + S +A
Sbjct: 485 DISYPVGEFTRMVKQWEGYAEDSMGIIVRYIKGAQLPDYVFDGEQRPS----ASVPSSKA 540
Query: 503 LERKVSSHTK 512
+R + K
Sbjct: 541 FKRTKTGKAK 550
>gi|431839265|gb|ELK01192.1| Poly(A) polymerase alpha, partial [Pteropus alecto]
Length = 746
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/490 (46%), Positives = 311/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 28 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 87
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 88 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 146
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 147 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 206
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 207 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 266
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 267 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 326
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y+ +
Sbjct: 327 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVL 384
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 385 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 443
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 444 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 499
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 500 LHELLPNHVL 509
>gi|195431638|ref|XP_002063835.1| GK15696 [Drosophila willistoni]
gi|194159920|gb|EDW74821.1| GK15696 [Drosophila willistoni]
Length = 872
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/519 (42%), Positives = 312/519 (60%), Gaps = 50/519 (9%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+ +V
Sbjct: 33 GQPAAKQLGMTSAISLAEPRPEDLQRTGELRGSLEPYNVFESQDELNHRMEILAKLNTLV 92
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+IS +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F
Sbjct: 93 KQWVKEISVSKNMPEAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 151
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 152 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLK 211
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 212 NLDPRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 271
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L VWDPR N D+YH
Sbjct: 272 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYH 331
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS++NVS ST ++++ EF RG I + E V W+ LFE +FF
Sbjct: 332 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRVPWERLFEAPSFFY 389
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 417
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 390 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNAHIAL-AHVNPKCFEFKKGQS 448
Query: 418 ----------------------------------SKPLYCSYFMGLQRKQGVPVGEGEQF 443
S P +F+GL+ ++ +
Sbjct: 449 ANSSQNNSGNEDDPKQTQQQQTNNQANAAASTVTSSPFCSMWFIGLEFER----SDNLNI 504
Query: 444 DIRLTVKEFKQAVSMY----TLRKPGMQISVAHVTRRNL 478
D+ +++ F + V M+ + K GM I HV R+ L
Sbjct: 505 DLTESIQNFTEHVIMHGVNIKMLKEGMTIDARHVKRKQL 543
>gi|432104377|gb|ELK31030.1| Poly(A) polymerase alpha [Myotis davidii]
Length = 844
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/490 (46%), Positives = 311/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 119 GITSPISLAAPKETDCLLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREIS 178
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 179 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 237
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 238 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 297
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 298 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 357
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 358 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 417
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y+ +
Sbjct: 418 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVL 475
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 476 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 534
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 535 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 590
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 591 LHELLPNHVL 600
>gi|332864603|ref|XP_003318331.1| PREDICTED: poly(A) polymerase beta [Pan troglodytes]
gi|397498031|ref|XP_003819800.1| PREDICTED: poly(A) polymerase beta [Pan paniscus]
Length = 637
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 246/600 (41%), Positives = 355/600 (59%), Gaps = 60/600 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+R G+ PISLA P + D + T++L + LR ++E +EE R VL +L+ +VK W++
Sbjct: 19 KRYGVFSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIR 78
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV P H R DFF +
Sbjct: 79 EISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAK 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + D +
Sbjct: 376 IVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEE-- 433
Query: 422 YCSYF---MGLQRKQGVPVGEGE-QFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVT 474
+C+ + +GL++ + + + +DI+ T ++QAV+ M+ + GM+I+ H+
Sbjct: 434 FCTMWVIGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLR 490
Query: 475 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 534
R+ L + L V K + +GR+ TD N + +
Sbjct: 491 RKEL---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLS 527
Query: 535 AKCHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 577
A C +M PSS+ + G SP ++ +++S N+Q + ++ NE +G
Sbjct: 528 AGCENSMSVPSSTSTMKTGPLISSSQGRNSPALAVVTASVANIQATEISLQQVNTNESSG 587
>gi|417412515|gb|JAA52639.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 738
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/490 (46%), Positives = 311/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T++L + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 34 GITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 93
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 94 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 152
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 153 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 212
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 213 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 272
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 273 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 332
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y+ +
Sbjct: 333 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVL 390
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 391 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTM 449
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 450 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 505
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 506 LHELLPNHVL 515
>gi|417412482|gb|JAA52623.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 725
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/490 (46%), Positives = 311/490 (63%), Gaps = 24/490 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T++L + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 34 GITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 93
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 94 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 152
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 153 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 212
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 213 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 272
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 273 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 332
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y+ +
Sbjct: 333 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVL 390
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 391 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTM 449
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 450 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 505
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 506 LHELLPNHVL 515
>gi|228152|prf||1717389A poly(A) polymerase
Length = 689
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/481 (46%), Positives = 308/481 (64%), Gaps = 20/481 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++I
Sbjct: 21 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIR 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 492
Query: 478 L 478
L
Sbjct: 493 L 493
>gi|72012045|ref|XP_780989.1| PREDICTED: poly(A) polymerase gamma [Strongylocentrotus purpuratus]
Length = 670
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 306/489 (62%), Gaps = 24/489 (4%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
SS + GIT ISL GP +D +T++L + L+ ++E++EE R VLG+LDQIVK
Sbjct: 8 SSTKKTYGITSAISLVGPRPEDNRQTKELVEALKPHGVFENEEELNHRLVVLGKLDQIVK 67
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
W++ ++ K + + KI+TFGSYRLGVH GADIDTLCV P H R DFF
Sbjct: 68 DWIRLVAEEKNIPPNIADTVGGKIYTFGSYRLGVHTKGADIDTLCVAPLHVERS-DFFKS 126
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 182
+ ++ +PE + V +A VPV+K F G+ +D+L+ARL+L V+PE+LD++ DS+L+N
Sbjct: 127 FYDIVKALPETKDCRAVEEAFVPVIKLVFDGIEMDILFARLALRVVPENLDLTDDSLLKN 186
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
D + VRSLNGCRVTD+IL +VP +NFR TLR ++ WAK++GVYSN GFLGG++WA+L
Sbjct: 187 LDPKCVRSLNGCRVTDEILNVVPSKENFRLTLRTIKLWAKKKGVYSNALGFLGGVSWAML 246
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYH 301
VAR CQLYPNA S LV++FF V+T+W WP PVLL + LG WDPR N D++H
Sbjct: 247 VARTCQLYPNAAASTLVNKFFLVFTKWAWPQPVLLKPPNTSTELGFAEWDPRVNVSDRFH 306
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS+YNVS ST ++ E Q G I + + + +A W+ LFE FF
Sbjct: 307 LMPIITPAYPQQNSTYNVSQSTKTVIEQELQGGLAITQEIMQGKA--TWEKLFESSNFFG 364
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
YK+Y+ + SA N DD W G VES++R L +ER+ + L H +P S S PL
Sbjct: 365 KYKHYIVLIASAGNEDDHLKWVGLVESKIRVLVGNLERNPHIKL-AHVYPKSIS-PSTPL 422
Query: 422 YCS-----------YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT----LRKPGM 466
S +F+GL+ + P+G ++ L ++ F V ++ L + GM
Sbjct: 423 DGSEEEKTDEHSTLWFIGLEFQ---PLGPATNVNLTLDIQFFVNTVHRHSVTIKLLQEGM 479
Query: 467 QISVAHVTR 475
+I HV R
Sbjct: 480 KIEAKHVKR 488
>gi|643|emb|CAA45031.1| poly(A) polymerase [Bos taurus]
Length = 689
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/481 (46%), Positives = 308/481 (64%), Gaps = 20/481 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++I
Sbjct: 21 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIR 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 492
Query: 478 L 478
L
Sbjct: 493 L 493
>gi|371470953|gb|AEX30810.1| poly(A) polymerase [Bubalus bubalis]
Length = 739
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/484 (46%), Positives = 310/484 (64%), Gaps = 20/484 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----L 421
+ + SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFQAPKENPDKEEF 433
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 475 RRNL 478
R+ L
Sbjct: 490 RKQL 493
>gi|164661493|ref|XP_001731869.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
gi|159105770|gb|EDP44655.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
Length = 527
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/413 (50%), Positives = 283/413 (68%), Gaps = 4/413 (0%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
S+ + G+T PIS+ GPT+ DL T LE LR N++ES EEA RE VLGR+D +VK
Sbjct: 2 STGVKMWGVTPPISMNGPTEKDLEVTNALEAELRANNVFESPEEAKLREVVLGRVDALVK 61
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
+V + S GL++ + + KIFTFGSYRLGVHGPG+DIDTLCV P+H RE DFF
Sbjct: 62 EFVYRASIKHGLSESAARASGGKIFTFGSYRLGVHGPGSDIDTLCVAPKHVQRE-DFFEI 120
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 182
+L +VTE+ VP+A+VP++K KF G+SID L++R++L I + L++ D++L+N
Sbjct: 121 FEALLQARDDVTEVTSVPEAYVPLIKTKFMGISIDFLFSRIALPRIDDSLELRDDNLLKN 180
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
DE+ VRSL G RVTD+IL LVP + FR LRC++ WA RR +YSNV GFLGG+ WA+L
Sbjct: 181 LDERDVRSLGGSRVTDEILHLVPNVYVFRLALRCIKLWASRRAIYSNVLGFLGGVAWAML 240
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VARICQLYPN V +VSRFF + QW+WP PVLL IE+G L ++VW+PR P D+ H
Sbjct: 241 VARICQLYPNEVAGAIVSRFFIILLQWKWPQPVLLKQIEDGPLPIRVWNPRLYPTDRLHR 300
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MPIITPAYP M +++NV+ ST +M +EF+RG E+ + + + + W+ LFE FF
Sbjct: 301 MPIITPAYPSMCATHNVTQSTQMVMTEEFRRGSEVVDRIFRGKT--SWNELFEKNDFFHK 358
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
YK YL++ S+ +AD W+G VESRLRQL +K+E +L HP F+
Sbjct: 359 YKYYLQVIASSGSADLQLKWQGTVESRLRQLIMKLEL-VPALLCAHPFVKGFN 410
>gi|55669561|pdb|1Q79|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 514
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 308/479 (64%), Gaps = 16/479 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDXLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLXFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRXIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNL 478
+ +GL K+ E D+ ++ F +QA++ + + M+I+ HV R+ L
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS-KMFEVDMKIAAMHVKRKQL 493
>gi|241643377|ref|XP_002411054.1| poly(A) polymerase, putative [Ixodes scapularis]
gi|215503685|gb|EEC13179.1| poly(A) polymerase, putative [Ixodes scapularis]
Length = 492
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/471 (46%), Positives = 294/471 (62%), Gaps = 9/471 (1%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PIS+A P D+ RTR LE LR L+ES +E R EVL +++++VK W+ +
Sbjct: 27 LGMTSPISMAPPKASDVARTRDLEDTLRQFGLFESADELAHRMEVLSKINELVKQWIYDV 86
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S K + + + KI+TFGSYRLGVH GADIDTLCV PRH R DFF ++L
Sbjct: 87 SVKKNMPPSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHVDRT-DFFSSFVELLR 145
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+ EV +L V +A VPV+K F+G+ +D+L+ARL+L IPE D+ +IL+N D + V
Sbjct: 146 QQEEVKDLRAVEEAFVPVIKMTFAGIELDMLFARLALKDIPEQQDLRDVNILKNLDPKCV 205
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRVTD+IL LVP + FR +LR ++ WAK+ GVYSNV G+LGG++WA+LVAR CQ
Sbjct: 206 RSLNGCRVTDEILHLVPNRETFRLSLRAIKLWAKKHGVYSNVLGYLGGVSWAMLVARTCQ 265
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNA + LV +FF V++QW WP PVLL EE LG VWDPR N D++HLMPIITP
Sbjct: 266 LYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEENKLGFPVWDPRINVADRFHLMPIITP 325
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP NS++NVS ST IM EF++G I + E +W LFEP FF YK+++
Sbjct: 326 AYPQQNSTFNVSVSTRTIMRQEFKQGLAITD--EIMLGRTEWIKLFEPPNFFGKYKHFIV 383
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLYCS 424
+ + + W G VES++R L +ERH Y + H +P F D K L
Sbjct: 384 LMATTMTKEHHLEWYGLVESKIRILISNLERHPYIEI-AHVNPESFPPCEPDGDK-LQSM 441
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTR 475
+F+GLQ + V +DIR V K+ + + K M++ + +V R
Sbjct: 442 WFIGLQFSKTEHVNVDLTYDIRSFVDTVKRQATAINILKQDMEVDIKYVRR 492
>gi|403287191|ref|XP_003934837.1| PREDICTED: poly(A) polymerase beta [Saimiri boliviensis
boliviensis]
Length = 634
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/597 (40%), Positives = 345/597 (57%), Gaps = 50/597 (8%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWV 65
+R GI+ PISLA P + D + T++L + LR ++E +EE R VL +L+ +VK W+
Sbjct: 15 AKRYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWI 74
Query: 66 KKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
++IS +K L +L+ KIFTFGSYRLGVH GADID LC+ PRH R DFF +
Sbjct: 75 REISESKSLPQSILENVGGKIFTFGSYRLGVHTKGADIDALCIAPRHVDRS-DFFTSFYA 133
Query: 126 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 185
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D
Sbjct: 134 KLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDI 193
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
+ +RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 194 RCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVAR 253
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 305
CQLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPI
Sbjct: 254 TCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPI 313
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
ITPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+
Sbjct: 314 ITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKH 371
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKP 420
Y+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 372 YIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE- 430
Query: 421 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRR 476
+ +GL K+ E D+ ++ F V + + GM+I+ H+ R+
Sbjct: 431 FRTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFETGMKIAAMHLRRK 489
Query: 477 NLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAK 536
L + L V K + +GR+ +D+ +
Sbjct: 490 EL---------------------HQLLPHHVLQEKKAHSTEGRRLTDLNDSSFDLSAGGE 528
Query: 537 CHATMPSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAGS 578
++PSS+ + G SP ++ +++S N+Q + ++ +E +G+
Sbjct: 529 NSISVPSSTSTMKTGPLTSSSQGRNSPSLAVMTASVANIQATEISLQQVNTSESSGT 585
>gi|417412397|gb|JAA52587.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 707
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/490 (45%), Positives = 307/490 (62%), Gaps = 18/490 (3%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T++L + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 31 KHYGITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 90
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 91 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 149
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 150 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 209
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 210 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 269
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 270 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 329
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y
Sbjct: 330 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHY 387
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 388 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-F 446
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F V + + M+I+ HV R+
Sbjct: 447 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQ 505
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 506 LHELLPNHVL 515
>gi|384487946|gb|EIE80126.1| hypothetical protein RO3G_04831 [Rhizopus delemar RA 99-880]
Length = 598
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/424 (48%), Positives = 289/424 (68%), Gaps = 9/424 (2%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M +LG+T PIS T+ ++ T L + L+ L+ES++EA R VLG+LD++
Sbjct: 1 MSQEKPIQLGVTPPISTEPSTEREIKLTNDLLETLKSYGLFESEQEAQKRVVVLGKLDKL 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK +V K+S+ KG D L +EA KIFT+GSYRLGVHG GADIDTLCV P+H RE FF
Sbjct: 61 VKEFVYKVSKMKGFPDSLAREAGGKIFTYGSYRLGVHGAGADIDTLCVFPKHVEREH-FF 119
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
++ ML E PEVTE+ VPDA+VPV+K FSG+ ID + ARL++ +P+DL+++ ++IL
Sbjct: 120 TIMYDMLKERPEVTEISAVPDAYVPVIKMHFSGIPIDFICARLAVARVPDDLELADNNIL 179
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N DE+ VRSLNG RVTD ILRLVP + FR LR ++ WAK + +YSNV GFLGG+ WA
Sbjct: 180 KNLDERCVRSLNGSRVTDDILRLVPNVATFRIALRTIKLWAKCKAIYSNVMGFLGGVAWA 239
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+L+ARICQLYPNA + +V+RFF + QW+WP PVLL +E+G L ++VW+P+ P D+
Sbjct: 240 MLIARICQLYPNACAASIVNRFFLIMYQWKWPQPVLLRPLEDGPLQVRVWNPKLYPADRS 299
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M +++NV+ ST +IM+ EF+ G ++ + W LF FF
Sbjct: 300 HRMPIITPAYPSMCATHNVTESTRKIMIQEFKNGIDVASNIILGSG--QWSDLFVKSDFF 357
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ-CHPHPGDFSDKSK 419
+ +K+YL+I S+ +++ W G VE++LRQL LK+E T +M++ HP+ F K
Sbjct: 358 QQFKHYLQITSSSYSSETQLMWSGLVEAKLRQLVLKLE--TVDMIELAHPYVKGF---DK 412
Query: 420 PLYC 423
YC
Sbjct: 413 AHYC 416
>gi|417412403|gb|JAA52590.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 709
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/493 (45%), Positives = 312/493 (63%), Gaps = 24/493 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T++L + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 31 KHYGITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 90
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 91 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 149
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 150 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 209
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 210 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 269
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 270 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 329
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y
Sbjct: 330 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHY 387
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 388 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-F 446
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 447 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 502
Query: 475 RRN----LPNFVF 483
R+ LPN V
Sbjct: 503 RKQLHELLPNHVL 515
>gi|302564155|ref|NP_001181787.1| poly(A) polymerase beta [Macaca mulatta]
Length = 637
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/594 (41%), Positives = 345/594 (58%), Gaps = 54/594 (9%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GI+ PISLA P + D + T++L + LR ++E +EE R VL +L+ +VK W+++IS
Sbjct: 22 GISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREIS 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 82 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYVKLKL 140
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 321 YPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVL 378
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 424
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 379 LASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTM 437
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPN 480
+ +GL K+ E D+ ++ F V + GM+I+ H+ R+ L
Sbjct: 438 WVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL-- 494
Query: 481 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 540
+ L +V K A +GR+ TD N + +A C +
Sbjct: 495 -------------------HQLLPHRVLQDKKAHATEGRRL--TDLNDSSFDLSAGCENS 533
Query: 541 M--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 577
M PSS+ + G SP ++ +++S N+Q + M+ +E +G
Sbjct: 534 MSVPSSTSTMKTGPLISSSQGRNSPALAVMTASMANVQATEISLQQMNTSESSG 587
>gi|67971414|dbj|BAE02049.1| unnamed protein product [Macaca fascicularis]
Length = 548
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/490 (46%), Positives = 308/490 (62%), Gaps = 18/490 (3%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 18 KHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFGGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F V + + M+I+ HV R+
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQ 492
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 493 LHQLLPNHVL 502
>gi|332257779|ref|XP_003277982.1| PREDICTED: poly(A) polymerase beta [Nomascus leucogenys]
Length = 637
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/602 (41%), Positives = 348/602 (57%), Gaps = 51/602 (8%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+RLGI+ PISLA P + D + T++L + LR ++E +EE R VL +L+ +VK W++
Sbjct: 19 KRLGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIR 78
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 79 EISESKSLPQSVIDNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYAK 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ FLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILCFLGGVSWAMLVART 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEQRNLNLPVWDPRVNPSDRYHLMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + +A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLRKA--EWSKLFEAPSFFQKYKHY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + +D K
Sbjct: 376 IVLLASATTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENTDMEK-F 434
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRR 476
+ +GL K+ E D+ ++ F +QAV+ + + GM+I+ H+ R+
Sbjct: 435 RTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAVN-SKMFEVGMKITAMHLRRK 492
Query: 477 NLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAK 536
L + L V K + +GR+ TD N + +A
Sbjct: 493 EL---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDTSFDLSAG 529
Query: 537 CHATM--PSSSGEFREG----------SPIMSTISSSSINLQFEHMDANELAGSNREKVE 584
C +M PSS+ + G SP ++ +++S N+Q + ++ S V
Sbjct: 530 CENSMSVPSSTSAVKTGPLISSSQGRNSPALAVMTASVANIQATEISLQQVNTSESSGVA 589
Query: 585 NN 586
N
Sbjct: 590 LN 591
>gi|55669560|pdb|1Q78|A Chain A, Crystal Structure Of Poly(A) Polymerase In Complex With
3'- Datp And Magnesium Chloride
Length = 514
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/478 (46%), Positives = 304/478 (63%), Gaps = 14/478 (2%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDXLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRXIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 478
+ +GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|402862797|ref|XP_003895729.1| PREDICTED: poly(A) polymerase beta [Papio anubis]
Length = 637
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/594 (41%), Positives = 344/594 (57%), Gaps = 54/594 (9%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GI+ PISLA P + D + T++L + LR ++E +EE R VL +L+ +VK W+++IS
Sbjct: 22 GISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREIS 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 82 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYVKLKL 140
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 321 YPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVL 378
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 424
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 379 LASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTM 437
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPN 480
+ +GL K+ E D+ ++ F V + GM+I+ H+ R+ L
Sbjct: 438 WVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL-- 494
Query: 481 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 540
+ L V K A +GR+ TD N + +A C +
Sbjct: 495 -------------------HQLLPHHVLQDKKAHATEGRRL--TDLNDSSFDLSAGCENS 533
Query: 541 M--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 577
M PSS+ + G SP ++ +++S N+Q + M+ +E +G
Sbjct: 534 MSVPSSTSTMKTGPLISSSQGRNSPALAVMTASMANVQATEISLQQMNTSESSG 587
>gi|392568430|gb|EIW61604.1| poly-A polymerase [Trametes versicolor FP-101664 SS1]
Length = 652
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/523 (43%), Positives = 309/523 (59%), Gaps = 47/523 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PI++A T + T L + LR +ES+ EA +RE VLGRL +VK +V ++
Sbjct: 17 LGVTPPIAVAESTPREKEVTVTLLEELRRQGTFESEAEAKTREIVLGRLAALVKKFVHQV 76
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S ++GL++ A KIFTFGSYRLGVHGPG+DIDTLCV P+H +RE DFF ML
Sbjct: 77 SLSRGLSEAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFDVFEDMLK 135
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
E V E+ VPDA+VP++K K SG+ IDL+ ARL+L I +DL + D++L+N DE+ V
Sbjct: 136 ETEGVIEVSGVPDAYVPIIKTKISGIPIDLVMARLALSTISDDLSLQDDNLLRNLDERCV 195
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNG RVTD+ILRLVP + FR LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQ
Sbjct: 196 RSLNGSRVTDEILRLVPNVTVFRNALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQ 255
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNA+ +VSRFF + QW WP PV+L IE+G L ++VW+P+ P D+ H MPIITP
Sbjct: 256 LYPNAIAGAIVSRFFIIMYQWTWPQPVMLKPIEDGPLPVRVWNPKLYPADRAHRMPIITP 315
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP M +++NV+ ST IM +EF++ +I + + +A W LF FF Y+ YL+
Sbjct: 316 AYPSMCATHNVTQSTQMIMTEEFKKASDIVDNIIVGKA--SWSDLFAKHDFFHKYRYYLQ 373
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC----- 423
+ S D W G VESR+RQL +K+E + ++ HP F S YC
Sbjct: 374 VIASTGGPDVQIKWSGTVESRIRQLVMKLE-YVESLALAHPFIKGFEQVS---YCLTDEE 429
Query: 424 ---------------------------------SYFMGLQRKQGVPVGEG-EQFDIRLTV 449
++++GL + P G + DI
Sbjct: 430 VRAVAQGEISEAIAKRKKEDIEGVEGGSAVYSTTFYIGLVVEPRQPGSVGPRRLDISYPT 489
Query: 450 KEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 491
EF + V M+ + M I V H+ LP++VF G R R
Sbjct: 490 TEFTKLVKMWEKFDENKMGIVVRHIRSAILPDYVFDEGERQPR 532
>gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/601 (41%), Positives = 351/601 (58%), Gaps = 64/601 (10%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
R G++ PISLA P + D + T++L + LR ++E +EE R VL +L+ +VK W+++
Sbjct: 20 RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIRE 79
Query: 68 ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
IS +K L +++ KIFTFGSYRLGVH GADID LCV P H R DFF + L
Sbjct: 80 ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 138
Query: 128 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 187
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 139 KLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 198
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR C
Sbjct: 199 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 258
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 307
QLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIIT
Sbjct: 259 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 318
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
PAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+
Sbjct: 319 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYI 376
Query: 368 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LY 422
+ SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 377 VLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFR 435
Query: 423 CSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVS--MYTLRKPGMQISVAHV 473
+ +GL K+ E I LT ++ F +QAV+ M+ + GM+I+ H+
Sbjct: 436 TMWVIGLGLKKP---DNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAVHL 489
Query: 474 TRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLR 533
R+ L + L V K + +GR+ TD N +
Sbjct: 490 RRKEL---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDL 526
Query: 534 NAKCHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELA 576
+A C +M PSS+ + G SP ++ +++S N+Q + ++ NE +
Sbjct: 527 SAGCENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESS 586
Query: 577 G 577
G
Sbjct: 587 G 587
>gi|351701193|gb|EHB04112.1| Poly(A) polymerase alpha, partial [Heterocephalus glaber]
Length = 736
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/496 (46%), Positives = 314/496 (63%), Gaps = 30/496 (6%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 15 KHYGITSPISLAAPKETDWVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 74
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 75 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 133
Query: 127 LTEMPEVTELHPVP-DAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 185
L EV +L +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D
Sbjct: 134 LKLQEEVKDLRVCKWEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDI 193
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
+ +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 194 RCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVAR 253
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 305
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPI
Sbjct: 254 TCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPI 313
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
ITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+
Sbjct: 314 ITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKH 371
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKP 420
Y+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 372 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE- 430
Query: 421 LYCSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVS--MYTLRKPGMQISVA 471
+ +GL K+ E E + LT ++ F +QA++ M+ + M+I+
Sbjct: 431 FRTMWVIGLVFKK----TENENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAM 483
Query: 472 HVTRRN----LPNFVF 483
HV R+ LPN V
Sbjct: 484 HVKRKQLHQLLPNHVL 499
>gi|123980646|gb|ABM82152.1| poly(A) polymerase beta (testis specific) [synthetic construct]
gi|123995471|gb|ABM85337.1| poly(A) polymerase beta (testis specific) [synthetic construct]
Length = 636
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/601 (41%), Positives = 351/601 (58%), Gaps = 64/601 (10%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
R G++ PISLA P + D + T++L + LR ++E +EE R VL +L+ +VK W+++
Sbjct: 19 RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIRE 78
Query: 68 ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
IS +K L +++ KIFTFGSYRLGVH GADID LCV P H R DFF + L
Sbjct: 79 ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 137
Query: 128 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 187
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 KLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 197
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR C
Sbjct: 198 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 257
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 307
QLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIIT
Sbjct: 258 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 317
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
PAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+
Sbjct: 318 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYI 375
Query: 368 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LY 422
+ SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 376 VLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFR 434
Query: 423 CSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVS--MYTLRKPGMQISVAHV 473
+ +GL K+ E I LT ++ F +QAV+ M+ + GM+I+ H+
Sbjct: 435 TMWVIGLGLKKP---DNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAVHL 488
Query: 474 TRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLR 533
R+ L + L V K + +GR+ TD N +
Sbjct: 489 RRKEL---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDL 525
Query: 534 NAKCHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELA 576
+A C +M PSS+ + G SP ++ +++S N+Q + ++ NE +
Sbjct: 526 SAGCENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESS 585
Query: 577 G 577
G
Sbjct: 586 G 586
>gi|336374059|gb|EGO02397.1| hypothetical protein SERLA73DRAFT_120990 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386978|gb|EGO28124.1| hypothetical protein SERLADRAFT_367679 [Serpula lacrymans var.
lacrymans S7.9]
Length = 558
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/561 (41%), Positives = 328/561 (58%), Gaps = 50/561 (8%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + G LG+T PIS T+ + T L + LR N E++EE+ RE VLGR+ +
Sbjct: 1 MATEEGH-LGVTPPISTGESTNREKEVTATLMEELRRQNTIETEEESRRREVVLGRVAAL 59
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK +V+++S A+GL++ A KIFTFGSYRLGVHGPG+DIDTLCV P+H +RE DFF
Sbjct: 60 VKKFVRQVSMARGLSEAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFF 118
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
ML E +E+ VP+A+VP++K K G+ DLL ARL+L IP+DL + D++L
Sbjct: 119 EVFEPMLKEADGASEVSGVPEAYVPIIKAKLMGIPFDLLMARLALSSIPDDLSLKDDNLL 178
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N DE+ +RSL G RV D+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 179 RNLDERCIRSLGGSRVVDEILRLVPNVHVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWA 238
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVARICQLYPNA+ +VSRFF + QW WP PVLL IEEG L ++VW+P+ P D+
Sbjct: 239 MLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPADRS 298
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M S++NV+ ST IM +EF++G +I + + A +W LF FF
Sbjct: 299 HRMPIITPAYPAMCSTHNVTASTQMIMTEEFKKGADIVDKVIVGTA--EWSELFAKHDFF 356
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 420
Y+ YL++ S +AD W G VESR+RQL +K+E + +++ HP F +
Sbjct: 357 HKYRYYLQVIASTGSADLQIKWSGTVESRIRQLVMKLE-YVDSLILAHPFIKGFEQIA-- 413
Query: 421 LYC--------------------------------------SYFMGLQRKQGVPVGEG-E 441
YC ++++GL + P G
Sbjct: 414 -YCTSDEEVRAVAQGETSDAITRRKKEDIAGVEGATEVHTTTFYIGLAIEPKQPGAAGPR 472
Query: 442 QFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSR 500
+ DI EF + V M+ +P M I V H+ LP++VF G R +P + +
Sbjct: 473 RLDISYPTTEFTKLVKMWEKYDEPTMGIVVRHIKSAALPDYVFDEGER--QPRQALKRPK 530
Query: 501 RALERKVSSHTKPGADDGRKR 521
A S+HT P + ++R
Sbjct: 531 TAKGSGKSNHTSPDVPNKKRR 551
>gi|62822283|gb|AAY14832.1| unknown [Homo sapiens]
Length = 465
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/447 (46%), Positives = 289/447 (64%), Gaps = 12/447 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLT 448
+F+G+ ++ V E +I LT
Sbjct: 433 VSMWFLGIIFRR---VENAESVNIDLT 456
>gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
gi|8895537|gb|AAF81013.1|AF218840_1 testis-specific poly(A) polymerase [Homo sapiens]
gi|41474575|gb|AAS07561.1| unknown [Homo sapiens]
Length = 636
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/601 (41%), Positives = 351/601 (58%), Gaps = 64/601 (10%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
R G++ PISLA P + D + T++L + LR ++E +EE R VL +L+ +VK W+++
Sbjct: 19 RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIRE 78
Query: 68 ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
IS +K L +++ KIFTFGSYRLGVH GADID LCV P H R DFF + L
Sbjct: 79 ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 137
Query: 128 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 187
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 KLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 197
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR C
Sbjct: 198 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 257
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 307
QLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIIT
Sbjct: 258 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 317
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
PAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+
Sbjct: 318 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYI 375
Query: 368 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LY 422
+ SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 376 VLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFR 434
Query: 423 CSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVS--MYTLRKPGMQISVAHV 473
+ +GL K+ E I LT ++ F +QAV+ M+ + GM+I+ H+
Sbjct: 435 TMWVIGLGLKKP---DNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHL 488
Query: 474 TRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLR 533
R+ L + L V K + +GR+ TD N +
Sbjct: 489 RRKEL---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDL 525
Query: 534 NAKCHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELA 576
+A C +M PSS+ + G SP ++ +++S N+Q + ++ NE +
Sbjct: 526 SAGCENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESS 585
Query: 577 G 577
G
Sbjct: 586 G 586
>gi|67972178|dbj|BAE02431.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/594 (41%), Positives = 346/594 (58%), Gaps = 54/594 (9%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GI+ PISLA P + D + T++L + LR ++E +EE R VL +L+ +VK W+++IS
Sbjct: 22 GISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREIS 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 82 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYVKLKL 140
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 321 YPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVL 378
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 424
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 379 LASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTM 437
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPN 480
+ +GL K+ E D+ ++ F V + GM+I+ H+ R+ L +
Sbjct: 438 WVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL-H 495
Query: 481 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 540
+ P V + ++ T R+ TD N ++ +A C +
Sbjct: 496 QLLPHHVLQDKKAQAT----------------------ESRRLTDLNDNSFDLSAGCENS 533
Query: 541 M--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 577
M PSS+ + G SP ++ +++S N+Q + M+ +E +G
Sbjct: 534 MSVPSSTSTMKTGPLISSSQGRNSPALAVMTASMANVQATEISLQQMNTSESSG 587
>gi|77874206|ref|NP_064529.4| poly(A) polymerase beta [Homo sapiens]
gi|51094718|gb|EAL23967.1| poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/601 (41%), Positives = 351/601 (58%), Gaps = 64/601 (10%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
R G++ PISLA P + D + T++L + LR ++E +EE R VL +L+ +VK W+++
Sbjct: 20 RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIRE 79
Query: 68 ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
IS +K L +++ KIFTFGSYRLGVH GADID LCV P H R DFF + L
Sbjct: 80 ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 138
Query: 128 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 187
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 139 KLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 198
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR C
Sbjct: 199 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 258
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 307
QLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIIT
Sbjct: 259 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 318
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
PAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+
Sbjct: 319 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYI 376
Query: 368 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LY 422
+ SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 377 VLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFR 435
Query: 423 CSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVS--MYTLRKPGMQISVAHV 473
+ +GL K+ E I LT ++ F +QAV+ M+ + GM+I+ H+
Sbjct: 436 TMWVIGLGLKKP---DNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHL 489
Query: 474 TRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLR 533
R+ L + L V K + +GR+ TD N +
Sbjct: 490 RRKEL---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDL 526
Query: 534 NAKCHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELA 576
+A C +M PSS+ + G SP ++ +++S N+Q + ++ NE +
Sbjct: 527 SAGCENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESS 586
Query: 577 G 577
G
Sbjct: 587 G 587
>gi|321469973|gb|EFX80951.1| hypothetical protein DAPPUDRAFT_318160 [Daphnia pulex]
Length = 630
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/483 (43%), Positives = 302/483 (62%), Gaps = 9/483 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
+ + LG+T IS+A P DL +T +L + L + E+ EE R EVL +++++ K
Sbjct: 20 NQARNLGMTSAISMAMPKPLDLQKTIELSEALVPHGVSETDEELNHRMEVLRKVNELAKE 79
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
W+K++S K + KI+TFGSYRLGVH GADID LCV PRH R D+F
Sbjct: 80 WIKEVSVQKNMPTSAADHVGGKIYTFGSYRLGVHNKGADIDALCVAPRHVDRV-DYFTSF 138
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L + PEVTEL V +A VPV+K F G+ +D+L+ARL+L IP+++D+ D +L+N
Sbjct: 139 VDLLKKQPEVTELRAVEEAFVPVIKMNFDGIELDMLFARLALKEIPDNMDLKDDMLLKNL 198
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D + VRSLNGCRVTD+ILRLVP I NFR LR ++ WAK+ G+YSNV G+LGG++WA+LV
Sbjct: 199 DPKCVRSLNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNVLGYLGGVSWAMLV 258
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
AR CQLYPNA + LV +FF V+++W WP PVLL + +L VWDPR N D+YHLM
Sbjct: 259 ARTCQLYPNAAAATLVQKFFLVFSKWEWPQPVLLKPPDNVNLNYPVWDPRVNVSDRYHLM 318
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PIITPAYP NS++NVS ST +M +EF++G + E + +A WD LFEP FF Y
Sbjct: 319 PIITPAYPQQNSTFNVSCSTRAVMQEEFRQGFNMTEEIMTGKA--SWDKLFEPPNFFVKY 376
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP--- 420
K+++ + S+ + +D W G VES++R L L +ER+ + L H +P + D +P
Sbjct: 377 KHFIVLIASSSSVEDQLEWVGLVESKIRHLILALERNDHITL-AHINPEQY-DPVQPEPD 434
Query: 421 -LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLP 479
+ +F+GL K+ + DI+ + + S K G +I HV R+ L
Sbjct: 435 TISTMWFIGLVFKKTESLNIDLTQDIQAFTGQVHRQASTAKTVKDGRRIDAKHVKRKQLS 494
Query: 480 NFV 482
+++
Sbjct: 495 SYL 497
>gi|242024112|ref|XP_002432474.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
gi|212517907|gb|EEB19736.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
Length = 625
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 308/491 (62%), Gaps = 11/491 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ LG+T ISLA P D+ +T++LE+ L+ N++ES E R EVL +L+ +VK W+
Sbjct: 28 KTLGVTSAISLALPKISDIQKTKELEEALKPFNVFESDAELNFRMEVLSKLNNLVKEWII 87
Query: 67 KIS-RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
IS K + + ++ KI+TFGSYRLGVH GADID LCV PRH R D+F ++
Sbjct: 88 DISVNQKNMPKNVAEQVGGKIYTFGSYRLGVHQKGADIDALCVAPRHIDRS-DYFTSFYE 146
Query: 126 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 185
+L E EV++L V +A VPV+K F G+ IDLL+ARL+L IP+D+D+ D +L+N D+
Sbjct: 147 LLKEQKEVSQLRSVENAFVPVIKMNFDGIEIDLLFARLALKEIPDDMDLKDDYLLKNLDQ 206
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
+ VRSLNGCRVTD+ILRLVP +NFR LR ++ WAK+ VYSN G+LGG++WA+LVAR
Sbjct: 207 KCVRSLNGCRVTDEILRLVPNKENFRLALRVIKLWAKKHRVYSNALGYLGGVSWAMLVAR 266
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 305
CQLYPNAV + LV +FF V+++W+WP PVLL + +L VWDPR N D+YHLMPI
Sbjct: 267 TCQLYPNAVAATLVHKFFLVFSKWKWPQPVLLKQPDTLNLNFPVWDPRVNVSDRYHLMPI 326
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
ITPAYP NS++NVS ST IM DE + G I E + + W+ LFE FF Y++
Sbjct: 327 ITPAYPQQNSTFNVSLSTRSIMQDELKLGLSITEDIMLGKC--GWEKLFETSHFFSKYRH 384
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIER-HTYNMLQCHPHPGDFSDKSKP---L 421
Y+ + +S+ + +D W G VES++R L +ER H N+ H +P F +P +
Sbjct: 385 YIVLLLSSNSPEDQLEWCGLVESKIRLLVGNLERNHHINL--AHVNPDSFQQPQEPDSNV 442
Query: 422 YCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 480
C+ +F+G+ + + +DI + + K GM++ +V R+ L +
Sbjct: 443 LCTMWFIGVVFAKTGNLNVDLTYDIMSFTDTVVRQARASNIWKEGMKVVAKYVKRKELTS 502
Query: 481 FVFPGGVRPSR 491
++ P ++ +
Sbjct: 503 YLSPSVLKKEK 513
>gi|343427736|emb|CBQ71262.1| probable PAP1-poly(A) polymerase [Sporisorium reilianum SRZ2]
Length = 658
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 242/615 (39%), Positives = 338/615 (54%), Gaps = 65/615 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
+G + LG+T PI+ GPT ++ T+ L L ++ES EE+ RE +LG+LD +
Sbjct: 12 LGGGPTRNLGVTPPIATNGPTPREIEVTKTLVAELEKQGVFESDEESKVREVILGKLDAM 71
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK +V ++S A G+++ L + A KIFTFGSYRLGVHGPG+DIDTLCV P+H RE DFF
Sbjct: 72 VKDFVYRVSIASGMSESLARAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFF 130
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
ML E EVTE+ VP AHVP++ KF GV ID +ARLSL + + L + D++L
Sbjct: 131 SVFEGMLKEREEVTEVAGVPTAHVPLIAAKFMGVDIDFTFARLSLPRVEDSLSLEDDNLL 190
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N DE+ VRSL G RVTD ILRLVP I FR LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 191 RNLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWA 250
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+L ARICQLYPN +VSRFF + QW+WP PVLL IE+G L ++VW+P+ P D+
Sbjct: 251 MLTARICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRL 310
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M +++NVS ST +M EF+R E+ + + + W LF FF
Sbjct: 311 HRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGK--THWSELFAKHDFF 368
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE---------------------- 398
YK YL++ S+ +AD W G VES++RQL +K+E
Sbjct: 369 FKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECW 428
Query: 399 -RHTYNMLQCHPHPGDFSDKSKPL------------------------------YCS-YF 426
H M+ P + +++ L Y + ++
Sbjct: 429 NDHEVRMVATGEVPDAVAQRTQKLGALPATDSAQQAAADEAAKVAEGKEGHRMIYTTMFY 488
Query: 427 MGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFP 484
+GL + + GEG + DI EF V + + M I V H+ LP +VF
Sbjct: 489 IGLSIEPKL-AGEGPRKLDISYPTAEFTGKVKQWDQYDEASMGIVVRHIKWTQLPAYVFE 547
Query: 485 GGV-RPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 543
GG R + + G + +RA K + T GA+ + + D +T + A M S
Sbjct: 548 GGENRVAAAAAGKVNGKRAKSGKKKNGT--GAEGAGQANGSLDEGETVTAVDQADAEMAS 605
Query: 544 SSGEFRE--GSPIMS 556
+ + R G+P+ +
Sbjct: 606 PTKKQRTVPGAPLAA 620
>gi|392568429|gb|EIW61603.1| polymerase [Trametes versicolor FP-101664 SS1]
Length = 607
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/588 (41%), Positives = 345/588 (58%), Gaps = 58/588 (9%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M S G LG+T PIS + + T L L+ ++ES+EEA +RE VLGRL +
Sbjct: 1 MASGTGY-LGVTPPISTNESSIREKEVTTTLMGELQRQGIFESEEEAKTREIVLGRLAAL 59
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+K +V+++S ++GL++ A KI+TFGSYRLGVHGPGADIDTLCV PRH TR+ DFF
Sbjct: 60 IKKFVRQVSLSRGLSEAAANAAGGKIYTFGSYRLGVHGPGADIDTLCVAPRHVTRD-DFF 118
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
L ML EM VTE+ VP+A+VP++ + SG+ IDLL+A+L L +IPEDLD+ D++L
Sbjct: 119 NVLEGMLREMEGVTEVSGVPEAYVPIISTEISGIPIDLLFAQLDLPIIPEDLDLQDDNLL 178
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N DE+++RSLNG RV ++ILRLVP + FRT LRC++ WA++R VYSNV GFLGG+ WA
Sbjct: 179 RNLDEKSIRSLNGSRVINEILRLVPNVDVFRTALRCIKLWAQKRAVYSNVNGFLGGVAWA 238
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVAR+CQLYPNAV +VSRFF + +W WP PVLL IE+G L ++VW+P+ +D+
Sbjct: 239 MLVARVCQLYPNAVAGAIVSRFFVIMHKWSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRS 298
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M +++NV ST +IM +EFQRG I + + +A +W LF FF
Sbjct: 299 HRMPIITPAYPSMCATHNVMQSTQQIMKEEFQRGCAIVDDVMLGKA--EWSALFVKHDFF 356
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH---------- 410
+ Y+ YL++ ++ + + W G V S++RQL +++E + + HP
Sbjct: 357 QRYRFYLQVVAASRDLEMQNKWSGTVASKIRQLVMRLE-YVDALKLAHPFIKGFDVVYYC 415
Query: 411 ---------------PG-------DFSDKSKPLYC---SYFMGLQRKQGVPVGEG-EQFD 444
P D +DK + S+F+GL K G + D
Sbjct: 416 LSEEEAQVVTRGEIPPAVAQRKKEDVADKEGVITVHTTSFFIGLSIKPKEAGSTGPRRLD 475
Query: 445 IRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVR--PSRPSKGTWDSRR 501
I EF + M+ + M I+V H+ LP+FVF G R SRP+K +
Sbjct: 476 ISYPTTEFVKMTKMWEKYDESAMHIAVRHIKHTVLPDFVFEPGEREAASRPTKRS----- 530
Query: 502 ALERKVSSHTKPGADDGRKRKQTDDNVDTHLR--NAKCHATMPSSSGE 547
R + P KR +TD VD R ++ +P+SS +
Sbjct: 531 ---RSIKDSPAPAT----KRSRTDLGVDMQSRPTSSASSTRLPASSSQ 571
>gi|297679796|ref|XP_002817705.1| PREDICTED: poly(A) polymerase beta [Pongo abelii]
Length = 637
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/601 (40%), Positives = 343/601 (57%), Gaps = 49/601 (8%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+R GI+ PISLA P + D + T++L + LR ++E + E R VL +L+ +VK W++
Sbjct: 19 KRYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEGELQRRILVLEKLNNLVKEWIR 78
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV P H R DFF +
Sbjct: 79 EISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAK 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 376 IILLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 434
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F V + GM+I+ H+ R+
Sbjct: 435 RTMWVIGLGLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKE 493
Query: 478 LPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKC 537
L + L V K + +GR+ TD N + +A C
Sbjct: 494 L---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFGLSAGC 530
Query: 538 HATM--PSSSGEFREG----------SPIMSTISSSSINLQFEHMDANELAGSNREKVEN 585
+M PSS+ + G SP ++ +++S N+Q + ++ S V
Sbjct: 531 ENSMSVPSSTSTMKTGPLISSSQGRNSPALAIMTASVANIQATEISLQQVNTSESSGVAL 590
Query: 586 N 586
N
Sbjct: 591 N 591
>gi|388857257|emb|CCF49099.1| probable PAP1-poly(A) polymerase [Ustilago hordei]
Length = 672
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/542 (41%), Positives = 312/542 (57%), Gaps = 60/542 (11%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
+G + LG+T PI+ GPT ++ T+ L L ++ES EE+ RE +LG+LD +
Sbjct: 12 LGGGPTRNLGVTPPIAANGPTPREIEVTKTLVAELEKQGVFESDEESKVREVILGKLDAM 71
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK +V ++S A G+++ L + A KIFTFGSYRLGVHGPG+DIDTLCV P+H RE DFF
Sbjct: 72 VKDFVYRVSIANGMSESLARSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFF 130
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
ML E EVTE+ VP AHVP++ KF GV ID +ARLSL + + L + D++L
Sbjct: 131 SVFETMLKEREEVTEVAGVPTAHVPLIASKFMGVDIDFTFARLSLSRVEDSLSLEDDNLL 190
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N DE+ VRSL G RVTD ILRLVP I FR LRC++ WA++R +YSNV GFLGG+ WA
Sbjct: 191 RNLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQQRAIYSNVMGFLGGVAWA 250
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+L ARICQLYPN +VSRFF ++ QW+WP PVLL IE+G L ++VW+P+ P D+
Sbjct: 251 MLTARICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTPIEDGPLSVRVWNPKLYPSDRL 310
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M +++NVS ST +M EF+R E+ + + + DW LF FF
Sbjct: 311 HRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGK--TDWCELFAKHDFF 368
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE-------RHTY-----NMLQCH 408
YK YL++ S+ +AD W G VES++RQL +K+E H + + +CH
Sbjct: 369 FKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECH 428
Query: 409 -------PHPGDFSDK----------------------------------SKPLY-CSYF 426
GD ++ + +Y +++
Sbjct: 429 NDHEVRLVATGDIPEQVAQRTQKVAALPETEEAKKAAEEEAAKITEGKEGHRMIYTTTFY 488
Query: 427 MGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFP 484
+GL + + GEG + DI EF V + + M I V H+ LP +VF
Sbjct: 489 IGLSIEPKL-AGEGPRKLDISYPTAEFTGKVKQWEQYDEASMGIVVRHIKWTQLPGYVFE 547
Query: 485 GG 486
GG
Sbjct: 548 GG 549
>gi|26335223|dbj|BAC31312.1| unnamed protein product [Mus musculus]
gi|74224037|dbj|BAE23879.1| unnamed protein product [Mus musculus]
Length = 429
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/408 (49%), Positives = 275/408 (67%), Gaps = 4/408 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
IS +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
+ + SA ++ W G VES++R L +ER+ + L H +P F
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSF 420
>gi|409079597|gb|EKM79958.1| hypothetical protein AGABI1DRAFT_113202 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 615
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/573 (40%), Positives = 338/573 (58%), Gaps = 46/573 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PIS + T+ + T L LR N++E+++E+ RE VLGR+ Q+VK +V K+
Sbjct: 10 LGVTPPISTSVSTEREKEVTITLMDELRRQNMFETEDESQLREIVLGRVAQLVKKFVHKV 69
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ +GL++ A KIFTFGSYRLGVHGPG+DIDTLCV P+H TR+ DFF +L
Sbjct: 70 ALLRGLSESAADSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRD-DFFEYFEPLLR 128
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
E+ VTE+ VP+A+VPV+K K SG+ +DLL AR++L IP+DL + D++L+N DE+ +
Sbjct: 129 ELDGVTEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDERCI 188
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSL G RVTD +LRLVP +Q FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQ
Sbjct: 189 RSLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARICQ 248
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNA +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H MPIITP
Sbjct: 249 LYPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITP 308
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP M +++NV+ ST IM +EF++G +I + + A W LF FF Y+ YL+
Sbjct: 309 AYPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSA--SWSDLFAKHDFFHKYRYYLQ 366
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-------------- 414
+ S N+D W G VESR+RQL +K+E + ++ HP F
Sbjct: 367 VIASTGNSDLQIKWAGTVESRIRQLIMKLE-YVESLTLAHPFIKGFDQVAYCLNEEEVRA 425
Query: 415 --------------------SDKSKPLY-CSYFMGLQRKQGVPVGEG-EQFDIRLTVKEF 452
+ + P+Y ++++GL + P G + DI EF
Sbjct: 426 IAQGETSPAIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPTIEF 485
Query: 453 KQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHT 511
+ V ++ + M + V H+ +LP++VF G RP + ++ +R + +T
Sbjct: 486 TKQVKLWEKYDESTMGLIVRHIRSSSLPDYVFDPGERPPKVTQ-----KRTKGPGKTHNT 540
Query: 512 KPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 544
P + R+R D L+ A+ P++
Sbjct: 541 SPDMPNKRQRSSQSVTTDLSLKQAENGHAAPAN 573
>gi|71023817|ref|XP_762138.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
gi|46101730|gb|EAK86963.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
Length = 667
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/398 (50%), Positives = 269/398 (67%), Gaps = 3/398 (0%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
+G + LG+T PI+ GPT ++ T+ L L ++ES EE+ RE +LG+LD +
Sbjct: 12 LGGGPTRNLGVTPPIATNGPTSREIEVTKTLVAELEKQGVFESDEESKIREVILGKLDAM 71
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK +V ++S + G+++ L + A KIFTFGSYRLGVHGPG+DIDTLCV P+H RE DFF
Sbjct: 72 VKDFVYRVSISHGMSETLARSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFF 130
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
ML E EVTE+ VP AHVP++ KF GV ID +ARL+L + ++L + D++L
Sbjct: 131 SVFESMLKEREEVTEVAGVPTAHVPLIAAKFMGVDIDFTFARLALPRVEDNLSLEDDNLL 190
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N DE+ VRSL G RVTD ILRLVP I FR LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 191 RNLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWA 250
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+L ARICQLYPN +VSRFF + QW+WP PVLL IE+G L ++VW+P+ P D+
Sbjct: 251 MLTARICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRL 310
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M +++NVS ST +M EF+R E+ + + + +WD LF FF
Sbjct: 311 HRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGK--TNWDELFAKHDFF 368
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 398
YK YL++ S+ +AD W G VES++RQL +K+E
Sbjct: 369 FKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLE 406
>gi|443899034|dbj|GAC76367.1| poly(a) polymerase and related nucleotidyltransferases [Pseudozyma
antarctica T-34]
Length = 672
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/542 (41%), Positives = 313/542 (57%), Gaps = 60/542 (11%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
+G + LG+T PI+ GPT ++ TR L L ++ES EE+ RE +LG+LD +
Sbjct: 12 LGGGPTRTLGVTPPIATNGPTPREIEVTRTLVAELERQRVFESDEESKVREVILGKLDAM 71
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK +V ++S A G+++ L + A KIFTFGSYRLGVHGPG+DIDTLCV P+H RE DFF
Sbjct: 72 VKDFVYRVSIAHGMSESLARAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFF 130
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
ML E EVTE+ VP AHVP++ KF GV ID +ARL+L + ++L + D++L
Sbjct: 131 SVFEGMLKEREEVTEVAGVPTAHVPLIASKFMGVDIDFTFARLALPRVEDNLSLEDDNLL 190
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
++ DE+ VRSL G RVTD ILRLVP I FR LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 191 RSLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWA 250
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+L ARICQLYPN +VSRFF ++ QW+WP PVLL IE+G L ++VW+P+ P D+
Sbjct: 251 MLTARICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRL 310
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M +++NVS ST +M EF+R E+ + + + DW LF F+
Sbjct: 311 HRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGK--TDWSELFAKHDFY 368
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE-------RHTY-----NMLQCH 408
YK YL++ S+ +AD W G VES++RQL +K+E H + + +CH
Sbjct: 369 FKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECH 428
Query: 409 -------PHPGDFSDK----------------------------------SKPLY-CSYF 426
GD D+ + +Y +++
Sbjct: 429 NDNEVRLVATGDIPDEVAQRTQKVDALPETEEAKQAAEAEAAKATEGKEGHRMIYTTTFY 488
Query: 427 MGLQRKQGVPVGEGE-QFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFP 484
+GL + + GEG + DI EF V + + M I V H+ LP +VF
Sbjct: 489 IGLSIEPKL-AGEGHRKLDISYPTAEFTSKVKQWEQYDEASMGIVVRHIKWTQLPAYVFE 547
Query: 485 GG 486
GG
Sbjct: 548 GG 549
>gi|291413714|ref|XP_002723110.1| PREDICTED: poly(A) polymerase beta (testis specific)-like
[Oryctolagus cuniculus]
Length = 629
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/498 (45%), Positives = 312/498 (62%), Gaps = 20/498 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+R GI+ PISLA P + D T+KL + LR ++E +EE SR +L +L+ +VK W++
Sbjct: 19 KRYGISSPISLAAPKETDCALTQKLIETLRPFGVFEEEEELQSRILILEKLNNLVKEWIR 78
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS ++ L + +++ ++FTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 79 EISESRSLPEAVVESVGGRLFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F GV ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLREEVRDLRAVEEAFVPVIKLCFDGVEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPDIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 376 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 434
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRR 476
+ +GL K+ E D+ ++ F +QA++ T M+I H+ R+
Sbjct: 435 RTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKTFEM-DMKIDAMHLRRK 492
Query: 477 N----LPNFVFPGGVRPS 490
LPN V P+
Sbjct: 493 ELHQLLPNHVLQKKKHPA 510
>gi|426355375|ref|XP_004045099.1| PREDICTED: poly(A) polymerase beta [Gorilla gorilla gorilla]
Length = 637
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 245/599 (40%), Positives = 353/599 (58%), Gaps = 58/599 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+R G++ PISLA P + D + TR+L + LR ++E +EE R VL +L+ +VK W++
Sbjct: 19 KRYGVSSPISLAVPKETDCLLTRRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIR 78
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S +K L + + KIFTFGSYRLGVH GADID LCV P H R DFF +
Sbjct: 79 EMSESKSLPQSVTENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFASFYAK 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSY 425
+ + SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 376 IVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEF 434
Query: 426 F------MGLQRKQGVPVGEGE-QFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTR 475
+GL++ + + + +DI+ T ++QAV+ M+ + GM+I+ H+ R
Sbjct: 435 RTMWVIGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRR 491
Query: 476 RNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNA 535
+ L + L V K + +GR+ TD N + +A
Sbjct: 492 KEL---------------------HQLLPHHVLQDKKAHSPEGRRL--TDLNDSSFDLSA 528
Query: 536 KCHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 577
C +M PSS+ + G SP ++ +++S ++Q + ++ NE +G
Sbjct: 529 GCENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVADIQATEMSLQQVNTNESSG 587
>gi|426192448|gb|EKV42384.1| hypothetical protein AGABI2DRAFT_195729 [Agaricus bisporus var.
bisporus H97]
Length = 615
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/573 (40%), Positives = 338/573 (58%), Gaps = 46/573 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PIS + T+ + T L LR N++E+++E+ RE VLGR+ Q+VK +V K+
Sbjct: 10 LGVTPPISTSVSTEREKEVTITLMDELRRQNMFETEDESQLREIVLGRVAQLVKKFVHKV 69
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ +GL++ A KIFTFGSYRLGVHGPG+DIDTLCV P+H TR+ DFF +L
Sbjct: 70 ALLRGLSESAADSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRD-DFFEYFEPLLR 128
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
E+ VTE+ VP+A+VPV+K K SG+ +DLL AR++L IP+DL + D++L+N DE+ +
Sbjct: 129 ELDGVTEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDERCI 188
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSL G RVTD +LRLVP +Q FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQ
Sbjct: 189 RSLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARICQ 248
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNA +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H MPIITP
Sbjct: 249 LYPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITP 308
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP M +++NV+ ST IM +EF++G +I + + A W LF FF Y+ YL+
Sbjct: 309 AYPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSA--SWSDLFAKHDFFHKYRYYLQ 366
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-------------- 414
+ S N+D W G VESR+RQL +K+E + ++ HP F
Sbjct: 367 VIASTGNSDLQIKWAGTVESRIRQLIMKLE-YVESLTLAHPFIKGFDQVAYCLNEEEVRA 425
Query: 415 --------------------SDKSKPLY-CSYFMGLQRKQGVPVGEG-EQFDIRLTVKEF 452
+ + P+Y ++++GL + P G + DI EF
Sbjct: 426 IAQGETSPAIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPTIEF 485
Query: 453 KQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHT 511
+ V ++ + M + V H+ +LP++VF G RP + ++ +R + +T
Sbjct: 486 TKQVKLWEKYDESTMGLIVRHIRSSSLPDYVFDPGERPPKVTQ-----KRTKGPGKTHNT 540
Query: 512 KPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 544
P + R+R D L+ A+ P++
Sbjct: 541 SPDMPNKRQRSSQSVTTDLSLKQAENGHAAPAN 573
>gi|115530785|emb|CAL49411.1| poly(A) polymerase alpha (pap) [Xenopus (Silurana) tropicalis]
Length = 474
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/461 (47%), Positives = 298/461 (64%), Gaps = 11/461 (2%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
GS Q+ GIT PISLA P D D T+KL + L+ ++E +EE R +LG+L+ +
Sbjct: 9 GSQQSQKTYGITSPISLATPKDTDCTLTQKLIETLKPFGVFEEEEELQHRILILGKLNNL 68
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK W+++IS K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF
Sbjct: 69 VKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFF 127
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L
Sbjct: 128 SSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 187
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA
Sbjct: 188 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 247
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 248 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 307
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 308 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKA--EWSKLFDAPNFF 365
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 415
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P + +
Sbjct: 366 QKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSENT 425
Query: 416 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 456
+K + + +GL K+ + E D+ ++ F V
Sbjct: 426 EKEE-FRTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTV 464
>gi|9910588|ref|NP_064327.1| poly(A) polymerase beta [Mus musculus]
gi|5701744|dbj|BAA83086.1| testis-specific poly(A) polymerase [Mus musculus]
gi|120538333|gb|AAI29898.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|120538567|gb|AAI29897.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|148687152|gb|EDL19099.1| poly (A) polymerase beta (testis specific) [Mus musculus]
Length = 642
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 243/598 (40%), Positives = 355/598 (59%), Gaps = 56/598 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+ +VK W++
Sbjct: 19 KQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 78
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS ++ L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 79 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + +DK +
Sbjct: 376 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-F 434
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ H+
Sbjct: 435 RTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLR 490
Query: 475 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 534
R+ L + + P V L++K + T + R TD ++ + +
Sbjct: 491 RKEL-HQLLPNHV---------------LQKKETHLT----ESVRLTAVTDSSLLLSI-D 529
Query: 535 AKCHATMPSSSGEFREG----------SPIMSTISSSSINLQF-----EHMDANELAG 577
++ T PS +G + G SP ++ +++S N+QF +H++ E +G
Sbjct: 530 SENSMTAPSPTGTMKTGPLTGNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 587
>gi|308812011|ref|XP_003083313.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
gi|116055193|emb|CAL57589.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
Length = 606
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/492 (43%), Positives = 303/492 (61%), Gaps = 34/492 (6%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGL 74
IS A PTD DL + L++ L ++YE EE REEVLG L+ +++ W + S AKG+
Sbjct: 20 ISNAPPTDRDLALSAALDEKLHTEDVYEDPEECTRREEVLGELNALLQEWTRTASAAKGI 79
Query: 75 NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG--------ELHQM 126
+ + N ++TFGSYRLGVHGP ADIDTLC+GPRH +REEDFFG + +
Sbjct: 80 TEDMRPSCN--LYTFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGFEENDYEGSFYDV 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADE 185
+ + P E+ PV DA VP +K F G ID+ Y L + +PEDLD+ S+L N D+
Sbjct: 138 MRKHPGTEEIVPVRDAIVPEIKTVFRGFEIDMAYTSLPSYTSVPEDLDVCATSVLLNLDD 197
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
V+SLNGCRV DQ+LR VP FR LR +R WA+RRG+YSNV GF GG+N A+LVAR
Sbjct: 198 PGVKSLNGCRVADQLLREVPNHDAFRVALRTLRLWAQRRGIYSNVVGFFGGVNLAILVAR 257
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-EEGSLGLQVWDPRRNPKDKYHLMP 304
+CQLYPNA SMLV FF++++ W+W PV+L I +EG G++VWD R N ++Y LM
Sbjct: 258 VCQLYPNAASSMLVYSFFQLWSAWQWSTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMK 317
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
I+TPAYP NS++NVS STL ++ EF+RG E+ + + N+ W+ L+ +F YK
Sbjct: 318 ILTPAYPAQNSTFNVSVSTLEVLKAEFRRGKEVTKNILLNKC--KWEDLWIKTSFLTMYK 375
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD--KSKPLY 422
+YL + ISA+ A+D + W+GWV SR++ L IE T + HP + D K + +
Sbjct: 376 HYLMVSISAKTAEDFKKWEGWVGSRVKLLIQGIENCTGGQMLAHPGTARYKDPEKEENTH 435
Query: 423 CSYFMG-----LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK-------PGMQISV 470
F+G L++K+ V + ++ V++F+ V+ + R PGMQ V
Sbjct: 436 VILFLGLFPSSLKKKEKVAM------NLNPAVEQFQMQVTSWMDRATGESNWVPGMQAMV 489
Query: 471 AHVTRRNLPNFV 482
HV R++LP FV
Sbjct: 490 RHVKRKDLPGFV 501
>gi|392587022|gb|EIW76357.1| Poly(A) polymerase [Coniophora puteana RWD-64-598 SS2]
Length = 629
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/520 (42%), Positives = 315/520 (60%), Gaps = 41/520 (7%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PIS A +D + T+ L + LR +E+ EE+ +RE VLGR+ VK +V+++
Sbjct: 8 LGVTLPISTADSSDREKELTKTLMEELRRQGTFENVEESRTRELVLGRVAAAVKKFVRQV 67
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S ++GL++ A KIFTFGSYRLGVHG G+DIDTLCV P+H RE DFF +L
Sbjct: 68 SLSRGLSESAATAAGGKIFTFGSYRLGVHGAGSDIDTLCVVPKHVLRE-DFFETFEPILR 126
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
E+ +E+ VP+A+VP++K K SG+ +D L ARL+L IP+DL + D++L+N DE+ +
Sbjct: 127 EVEGASEVSGVPEAYVPIIKAKISGIPLDFLMARLALSSIPDDLTLQDDNLLRNLDERCI 186
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSL G RV D+ILRLVP ++ +R +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQ
Sbjct: 187 RSLGGSRVNDEILRLVPNVEVYRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAILVARICQ 246
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNAV +VSRFF + QW WP PVLL IEEG L ++VW+P+ P D+ H MPIITP
Sbjct: 247 LYPNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITP 306
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP M S++NV+ ST I+ +EF++G +I + + A W LF FF Y+ YL+
Sbjct: 307 AYPAMCSTHNVTQSTQMIVTEEFKKGADIVDKVIVGSA--TWADLFRKHDFFHKYRYYLQ 364
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--------SDKSKP 420
+ S +N + W G VESRLRQL +K+E + +++ HP F D+ +
Sbjct: 365 VIASTDNTETQIKWAGTVESRLRQLVMKLE-YVDSLILAHPFIKGFDQVCHCSTEDEIRS 423
Query: 421 LYC---------------------------SYFMGLQRKQGVPVGEG-EQFDIRLTVKEF 452
+ C ++++GL+ + G + DI EF
Sbjct: 424 VACGEIPEAVRKRKAEDIKNVEGAQTVYSTAFYIGLEIEPKPAGATGPRKLDISYPTTEF 483
Query: 453 KQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 491
+ V M+ + M I V H+ +LP++VF G R R
Sbjct: 484 TKLVKMWEKYNETTMGIYVRHMKSTSLPDYVFDEGERQPR 523
>gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
Length = 641
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 243/598 (40%), Positives = 355/598 (59%), Gaps = 56/598 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+ +VK W++
Sbjct: 18 KQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS ++ L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + +DK +
Sbjct: 375 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-F 433
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ H+
Sbjct: 434 RTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLR 489
Query: 475 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 534
R+ L + + P V L++K + T + R TD ++ + +
Sbjct: 490 RKEL-HQLLPNHV---------------LQKKETHLT----ESVRLTAVTDSSLLLSI-D 528
Query: 535 AKCHATMPSSSGEFREG----------SPIMSTISSSSINLQF-----EHMDANELAG 577
++ T PS +G + G SP ++ +++S N+QF +H++ E +G
Sbjct: 529 SENSMTAPSPTGTMKTGPLTGNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 586
>gi|390601592|gb|EIN10986.1| Poly(A) polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 582
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/561 (43%), Positives = 325/561 (57%), Gaps = 51/561 (9%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M NG LG+T PIS+ T + T L + L+ E +EEA +RE VLGR+ +
Sbjct: 1 MAQHNGH-LGVTAPISVMESTTREKEVTITLLEELKKQKTIEGEEEARTREIVLGRVAAL 59
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK V +IS A GL++ A KIFTFGSYRLGVHGPG+DIDTLCV P+H +REE +F
Sbjct: 60 VKKCVHEISLANGLSESAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSREE-WF 118
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
+ L EM VTE+ VP+A VPV+K K G+ ID ARL+L IPEDLD+S D++L
Sbjct: 119 DVFERRLREMDGVTEVSGVPEAFVPVIKAKVLGIPIDFTMARLALSSIPEDLDLSDDNLL 178
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N DE+ VRSLNG RVTD ILRLVP++ FR LRC++ WA R+ +YSNV GFLGG+ WA
Sbjct: 179 RNLDERCVRSLNGSRVTDAILRLVPEVNVFRVALRCIKLWATRKAIYSNVNGFLGGVAWA 238
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVAR+CQLYPNA +VSRFF + QW+WP PVLL IEEG L ++VW+P+ P D+
Sbjct: 239 MLVARVCQLYPNACAGAIVSRFFIIMYQWKWPQPVLLKTIEEGPLNVRVWNPKLYPTDRA 298
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M +++NV ST I+ +E ++G E+ E + A DW LF FF
Sbjct: 299 HRMPIITPAYPAMCATHNVMASTQMIITEELKKGSELVEKIIVGTA--DWSELFIKHDFF 356
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 420
+ Y+ YL++ S NAD W G VESR+RQL +K+E + ++ HP F S
Sbjct: 357 DKYRYYLQVIASTGNADLQLKWSGTVESRIRQLVMKLE-YVDSLTLAHPFIKGFEQVS-- 413
Query: 421 LYC--------------------------------------SYFMGLQRKQGVPVGEG-E 441
YC ++++GL + P G
Sbjct: 414 -YCLSDEEVRAVAQGEISETVKKRVLEDIKDKEGASTVYTTTFYIGLAIEPKQPGSNGPR 472
Query: 442 QFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSR 500
+ DI EF + V M+ + M I V H+ LP++VF G R +RP K S+
Sbjct: 473 KLDISYPTTEFTKLVKMWEKFDEAKMGIVVRHIRHTALPDYVFGEGGRQTRPQKRPKTSK 532
Query: 501 RALERKVSSHTKPGADDGRKR 521
+ + S +T P + ++R
Sbjct: 533 NSGQ---SGNTSPEQPNKKRR 550
>gi|312381415|gb|EFR27171.1| hypothetical protein AND_06288 [Anopheles darlingi]
Length = 1653
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/545 (40%), Positives = 326/545 (59%), Gaps = 78/545 (14%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYL---------------------RDVNLYESQEEA 47
LG+T IS A P +DL +T++LEK L N++E++ E
Sbjct: 29 LGMTSAISTAEPKPEDLQKTQELEKSLGKCGLVREEQYPGLMCQDFPLEPYNVFEAESEL 88
Query: 48 VSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLC 107
R E+L +L+ +VK WV+ +S ++ + + ++ KI+TFGSYRLGVH GADID LC
Sbjct: 89 NHRMEILAKLNTLVKQWVRDVSISRHMPEATAEKLGGKIYTFGSYRLGVHHKGADIDALC 148
Query: 108 VGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV 167
V PR+ R D+FG ++L + PEVTE V +A VPV+K F G+ IDLL+ARL+L
Sbjct: 149 VAPRNIDRS-DYFGSFFELLKQQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKE 207
Query: 168 IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRR--- 224
IP++ D+ D +L+N D+++VRSLNGCRVTD+ILRLVP I NFR LR ++ WAKR+
Sbjct: 208 IPDNFDLRDDMLLKNLDQKSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRKLLP 267
Query: 225 -----------------------------GVYSNVAGFLGGINWALLVARICQLYPNAVP 255
G+YSN G+ GG++WA+LVAR CQLYPNAV
Sbjct: 268 HGLISPEGMCDERCFNVRVAFCICLVTGHGIYSNSLGYFGGVSWAMLVARTCQLYPNAVA 327
Query: 256 SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 315
+ LV +FF V+++W+WP PVLL + +LG QVWDPR N +D++HLMPIITPAYP NS
Sbjct: 328 ATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNS 387
Query: 316 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN 375
++NVS+ST ++M+ EF RG +I + + + WD LFE +FF Y++++ + +++ N
Sbjct: 388 TFNVSSSTRKVMLMEFNRGMQITDDIMMGKQ--MWDKLFEAPSFFYRYRHFIVLLVTSSN 445
Query: 376 ADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHP--------HP--------GDFSDKS 418
ADD W G VES++R L +ER+ + N+ +P +P G ++++
Sbjct: 446 ADDHLEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQHEQNPAATLNAGGGADANQT 505
Query: 419 KPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRN 477
+CS +F+GL+ ++ E D+ +++ F +V + L K GM+I HV R+
Sbjct: 506 PAAFCSLWFIGLEFER----TENLNVDLTESIQSFTDSVHKHALLKDGMKIEARHVRRKQ 561
Query: 478 LPNFV 482
L +++
Sbjct: 562 LASYL 566
>gi|5456696|gb|AAD43624.1|AF039957_1 testis-specific poly(A) polymerase [Mus musculus]
Length = 641
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/598 (40%), Positives = 354/598 (59%), Gaps = 56/598 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+ +VK W++
Sbjct: 18 KQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS ++ L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RS NGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSFNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + +DK +
Sbjct: 375 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-F 433
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ H+
Sbjct: 434 RTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLR 489
Query: 475 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 534
R+ L + + P V L++K + T + R TD ++ + +
Sbjct: 490 RKEL-HQLLPNHV---------------LQKKETHLT----ESVRLTAVTDSSLLLSI-D 528
Query: 535 AKCHATMPSSSGEFREG----------SPIMSTISSSSINLQF-----EHMDANELAG 577
++ T PS +G + G SP ++ +++S N+QF +H++ E +G
Sbjct: 529 SENSMTAPSPTGTMKTGPLTGNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 586
>gi|311250845|ref|XP_003124320.1| PREDICTED: poly(A) polymerase beta-like [Sus scrofa]
Length = 640
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/499 (45%), Positives = 318/499 (63%), Gaps = 22/499 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+R GI+ PISLA P + D + T+KL + L+ ++E +EE R +L +L+ +VK W++
Sbjct: 18 KRYGISSPISLAPPRETDCVLTQKLIETLKPFGVFEEEEELQRRILILEKLNYLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 ELSESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWAMLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IALLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPRESPDKEE-F 433
Query: 422 YCSYFMG--LQRKQGVPVGEGE-QFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTR 475
+ +G L+R + + + +DI+ T ++QAV+ M+ + M+I+ H+ R
Sbjct: 434 RTMWVIGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNSKMFEM---DMKIAAMHLRR 490
Query: 476 RN----LPNFVFPGGVRPS 490
+ LPN V P PS
Sbjct: 491 KELHQLLPNHVLPQKKTPS 509
>gi|296192583|ref|XP_002744135.1| PREDICTED: poly(A) polymerase beta [Callithrix jacchus]
Length = 634
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/593 (40%), Positives = 345/593 (58%), Gaps = 47/593 (7%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWV 65
+R GI+ PISLA P + D + T++L + LR ++E +EE R VL +L+ +VK W+
Sbjct: 15 AKRYGISAPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWI 74
Query: 66 KKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
++IS +K L +L+ KIFTFGSYRLGVH GADID LC+ PRH R DFF +
Sbjct: 75 REISESKSLPQSILENVGGKIFTFGSYRLGVHTKGADIDALCIAPRHVDRS-DFFTSFYA 133
Query: 126 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 185
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L++ D
Sbjct: 134 KLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKDLDI 193
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
+++RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 194 RSIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHSIYSNILGFLGGVSWAMLVAR 253
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 305
CQLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPI
Sbjct: 254 TCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEEQNLNLPVWDPRVNPSDRYHLMPI 313
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
ITPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+
Sbjct: 314 ITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKH 371
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP---- 420
Y+ + SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 372 YIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFLAPKENPGKKE 430
Query: 421 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTR 475
+ +GL K+ E D+ ++ F +QAV+ + + GM+I+ H+ R
Sbjct: 431 FRTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAVN-SKMFETGMKIAAMHLRR 488
Query: 476 RNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNA 535
+ L + L V K + +GR+ +D
Sbjct: 489 KEL---------------------HQLLPHHVLQEKKAHSPEGRRLTDLNDRSFDLSAGG 527
Query: 536 KCHATMPSSSGEFREG----------SPIMSTISSSSINLQFEHMDANELAGS 578
+ ++PSS+ + G SP ++ +++S N++ + ++ S
Sbjct: 528 ENSISVPSSTSTMKTGPLISSSQGRNSPALAVMTASVTNIRATEISLQQVNTS 580
>gi|58865618|ref|NP_001012020.1| poly(A) polymerase beta [Rattus norvegicus]
gi|50927350|gb|AAH79046.1| Poly (A) polymerase beta (testis specific) [Rattus norvegicus]
gi|149034991|gb|EDL89711.1| poly (A) polymerase beta (testis specific) [Rattus norvegicus]
Length = 642
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/598 (40%), Positives = 353/598 (59%), Gaps = 56/598 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+ +VK W++
Sbjct: 19 KQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 78
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS ++ L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 79 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 376 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEE-F 434
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ H+
Sbjct: 435 RTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLR 490
Query: 475 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 534
R+ L + + P V L++K + T +G + +D+ +
Sbjct: 491 RKEL-HQLLPNHV---------------LQKKETHLT-----EGVRLTAVNDSSLLLSID 529
Query: 535 AKCHATMPSSSGEFREG----------SPIMSTISSSSINLQF-----EHMDANELAG 577
++ T PS +G + G SP ++ +++S N+QF +H++ E +G
Sbjct: 530 SENSMTAPSPTGTIKTGPLTANPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 587
>gi|50925416|gb|AAH79525.1| Papolb protein [Danio rerio]
Length = 435
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/361 (54%), Positives = 255/361 (70%), Gaps = 3/361 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + DL+ TRKL + LR ++E + E R VLG+L+ +VK W++
Sbjct: 17 KHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIR 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S AK + ++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++
Sbjct: 77 EVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYV 373
Query: 367 L 367
L
Sbjct: 374 L 374
>gi|38541302|gb|AAH62850.1| Papolb protein [Danio rerio]
Length = 436
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/361 (54%), Positives = 255/361 (70%), Gaps = 3/361 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + DL+ TRKL + LR ++E + E R VLG+L+ +VK W++
Sbjct: 17 KHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIR 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S AK + ++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++
Sbjct: 77 EVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYV 373
Query: 367 L 367
L
Sbjct: 374 L 374
>gi|357621141|gb|EHJ73080.1| poly a polymerase [Danaus plexippus]
Length = 615
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/559 (40%), Positives = 320/559 (57%), Gaps = 42/559 (7%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N + LG+T IS+AGP D+ +T +L++ L ++ES+ E R EVLG L ++V+ W
Sbjct: 27 NLKTLGMTSAISMAGPKPIDIEKTNELKESLVPFGVFESEAEMHHRMEVLGSLHRLVRQW 86
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
++ S K + + I+TFGSYRLGVH GADID LCV PRH R D+F +
Sbjct: 87 IRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIDRS-DYFQSFY 145
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L E P+V +L V DA VPV+K F G+ IDLL+ARL+L IP+ D+ D +L+N D
Sbjct: 146 ELLKEQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDLRDDMLLKNLD 205
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
++ VRSLNGCRVTD+ILRLVP I FR TLR ++ WAKR G+YSN G+LGG++WA+LVA
Sbjct: 206 QKCVRSLNGCRVTDEILRLVPDINTFRLTLRAIKLWAKRHGIYSNTLGYLGGVSWAMLVA 265
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
R CQLYPNA+P+ L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMP
Sbjct: 266 RTCQLYPNALPATLLHKFFLVFSQWKWPQPVLLKPPDSVNLGFPVWDPRVNMSDRYHLMP 325
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITPAYP NS++NVS+ST ++M+EF+ G I + E W+ LFE FF YK
Sbjct: 326 IITPAYPQQNSTFNVSSSTRTVIMEEFRLGLAITD--EIMLGKCGWERLFEAANFFSRYK 383
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 424
+++ + S+ N D W G VES++R L +ER+ + + H +P ++ S PL +
Sbjct: 384 HFIVLLASSANTLDQLPWCGLVESKIRHLITTLERNQHITI-AHVNPECYN--SVPLNTN 440
Query: 425 YFMGLQRKQGVPVGEGEQ--------------------------------FDIRLTVKEF 452
L G PV E D+ + F
Sbjct: 441 NGHPLALPPGTPVQTEEHGAAEVKNDKGEIVANVCSMWFIGLVFDKTNVNVDLTYDISSF 500
Query: 453 KQAVSMYT----LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVS 508
+AV + + GM I HV R+ L ++ P +R + +K ++ +K
Sbjct: 501 TKAVHYQAENTNVLREGMTIEARHVRRKQLHQYLSPSLLRREKVNKRKNETLAVHTKKAK 560
Query: 509 SHTKPGADDGRKRKQTDDN 527
++ AD+ T+D+
Sbjct: 561 RVSESSADEVSVLSYTEDS 579
>gi|37595378|gb|AAQ94575.1| polyA polymerase alpha [Danio rerio]
Length = 386
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/373 (53%), Positives = 259/373 (69%), Gaps = 7/373 (1%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + DL+ TRKL + LR ++E + E R VLG+L+ +VK W++
Sbjct: 17 KHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIR 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S AK + ++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++
Sbjct: 77 EVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYV 373
Query: 367 LR----IDISAEN 375
L +D EN
Sbjct: 374 LSCISLLDTHGEN 386
>gi|159154998|gb|AAI54504.1| Papolb protein [Danio rerio]
Length = 436
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/361 (54%), Positives = 255/361 (70%), Gaps = 3/361 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + DL+ TRKL + LR ++E + E R VLG+L+ +VK W++
Sbjct: 17 KHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIR 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S AK + ++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++
Sbjct: 77 EVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYV 373
Query: 367 L 367
L
Sbjct: 374 L 374
>gi|170090568|ref|XP_001876506.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647999|gb|EDR12242.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 600
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 234/523 (44%), Positives = 319/523 (60%), Gaps = 45/523 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PIS + + T L + LR N +E++EEA +RE VLGR+ +VK +V+++
Sbjct: 26 LGVTPPISTMESNEREKEVTMTLMEELRRQNTFETEEEARTREIVLGRVAALVKKFVRQV 85
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S AKGL++Q A KIFTFGSYRLGVHGPG+DIDTLCV P+H +RE DFF ML
Sbjct: 86 SIAKGLSEQAANLAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFEVFEPMLK 144
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
++ VTE+ VP+A+VP++K K SG+ +D L ARL+L IP+DL + D++L+N DE+ V
Sbjct: 145 DLEGVTEVSGVPEAYVPIVKTKISGIPLDFLMARLALSSIPDDLSLQDDNLLRNLDERCV 204
Query: 189 RSL--NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
RSL G RV D+ILRLVP +Q FR LRC++ WA+RR +YSNV GFLGG+ WALLVARI
Sbjct: 205 RSLGATGSRVIDEILRLVPNVQVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWALLVARI 264
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H MPII
Sbjct: 265 CQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRSHRMPII 324
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP M S++NV+ ST IM +EF+RG +I + + A W LF FF Y+ Y
Sbjct: 325 TPAYPAMCSTHNVTASTQIIMTEEFKRGADIVDKVIVGSA--TWSELFAKHDFFHKYRYY 382
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH---------------- 410
L++ S NAD W G VESR+RQL +K+E + +++ HP
Sbjct: 383 LQVIASTGNADLQIKWSGTVESRIRQLVMKLE-YVDSLILAHPFIRGFEQVSYCLSEDEV 441
Query: 411 ----PGDFSDK--------------SKPLY-CSYFMGLQRKQGVPVGEG--EQFDIRLTV 449
G+ SD + P+Y ++++GL + P G + DI
Sbjct: 442 RAVAEGEISDSVAGRKKEDIEGKEGAGPVYSTTFYIGLAIEPK-PTGATGPRRLDISYPT 500
Query: 450 KEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 491
+F + V M+ + M I V H+ LP+ VF G RP +
Sbjct: 501 TDFTKLVKMWEKYDEATMGIVVRHIKSSGLPDNVFEPGERPPK 543
>gi|354467761|ref|XP_003496337.1| PREDICTED: poly(A) polymerase beta-like [Cricetulus griseus]
Length = 642
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/583 (40%), Positives = 346/583 (59%), Gaps = 51/583 (8%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+ +VK W++
Sbjct: 19 KQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 78
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS ++ L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 79 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 376 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEE-F 434
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ H+
Sbjct: 435 RTMWVIGLVLKKP-ENSESLSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLK 490
Query: 475 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 534
R+ L + + P V L++K + T +G + +D+ +
Sbjct: 491 RKEL-HQLLPNHV---------------LQKKETHLT-----EGVRLTAVNDSSLLLSVD 529
Query: 535 AKCHATMPSSSGEFREG----------SPIMSTISSSSINLQF 567
++ + PS +G + G SP ++ +++S N+QF
Sbjct: 530 SENSMSAPSPTGLVKTGPLTGNPQGRSSPALAVMTASVTNIQF 572
>gi|395845544|ref|XP_003804110.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase beta [Otolemur
garnettii]
Length = 637
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/479 (46%), Positives = 303/479 (63%), Gaps = 16/479 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+ +VK W+++IS
Sbjct: 22 GISSPISLAAPKDTDCTLTQKLIETLKPFGVFEEEEELQRRILILEKLNNLVKEWIREIS 81
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 82 ESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 140
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 321 YPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVL 378
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 424
SA W G VES++R L +E++ + L Q P P + +K +
Sbjct: 379 LASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPEKEE-FRTM 437
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNL 478
+ +GL K+ E D+ ++ F +QA++ M+I+ H+ R+ L
Sbjct: 438 WVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINTKMFEM-DMKIAAMHLKRKEL 494
>gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=Poly(A) polymerase alpha-A; Short=PAP-alpha-A;
AltName: Full=Polynucleotide adenylyltransferase alpha-A
gi|643644|gb|AAC59745.1| poly(A) polymerase type 1, partial [Xenopus laevis]
Length = 715
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/494 (44%), Positives = 307/494 (62%), Gaps = 17/494 (3%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA D D +KL + L+ ++E +E+ R +LG+L+ +VK W++
Sbjct: 2 KTFGITSPISLAAAKDTDCTLMQKLIETLKPYGVFEEEEQLQHR--ILGKLNNLVKEWIR 59
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS K L +++ KIFTFG YRLGVH GADID LCV PRH R DFF +
Sbjct: 60 EISELKHLPQSVIENVGGKIFTFGPYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYDK 118
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 119 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 178
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 179 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 238
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 239 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 298
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF+ YK+Y
Sbjct: 299 TPAYPQQNSTYNVSVSTRAVMIEEFKQGLAITDEILLGKA--EWSKLFDAPNFFQKYKHY 356
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF 426
+ + SA W G VES++R L +E++ + L H +P F S+ + F
Sbjct: 357 ILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPRSFPAPSENMEKEEF 415
Query: 427 -----MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN 477
+GL K+ + E D+ ++ F V + + M+I+ HV R+
Sbjct: 416 RTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVDRQAINSKMFETEMKIAAMHVKRKQ 474
Query: 478 LPNFVFPGGVRPSR 491
L + + P V P +
Sbjct: 475 L-HQLQPSHVSPKK 487
>gi|426254899|ref|XP_004021112.1| PREDICTED: poly(A) polymerase beta [Ovis aries]
Length = 639
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/490 (45%), Positives = 306/490 (62%), Gaps = 18/490 (3%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GI+ PISLA P + D + T+KL + L+ ++E +EE R +L +L+ +VK W++
Sbjct: 19 EHYGISSPISLAPPRETDCILTQKLIETLKPFGVFEEEEELQRRILILEKLNNLVKEWIR 78
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 79 EISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 376 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-F 434
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN 477
+ +GL K+ E D+ ++ F V + + M+I+ H+ R+
Sbjct: 435 RTMWVIGLVLKKP-ENSEVLSIDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHLKRKE 493
Query: 478 ----LPNFVF 483
LPN V
Sbjct: 494 LHQLLPNHVL 503
>gi|388578995|gb|EIM19325.1| Poly(A) polymerase, partial [Wallemia sebi CBS 633.66]
Length = 557
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/528 (42%), Positives = 314/528 (59%), Gaps = 53/528 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA PTD + L + L+D N ES++E+++RE+VL + +VK +VK++S
Sbjct: 1 GITPPISLASPTDLEKQVDAGLIQELKDQNTIESEQESLNREKVLALVQSLVKEFVKRVS 60
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
G+++ L +A KIFTFGSYRLGV+ PGADIDTLCV P+H +RE DFF +L
Sbjct: 61 IRNGMSESLADQAGGKIFTFGSYRLGVNQPGADIDTLCVVPKHVSRE-DFFDVFEPLLKT 119
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV+ VPDA+VP++K SG+ ID L ARL+L IP+DL+++ D++L+N DE+ VR
Sbjct: 120 REEVSVCAGVPDAYVPIIKTTISGIEIDFLVARLALATIPDDLELADDNLLKNLDERCVR 179
Query: 190 SLN-------GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
SLN G RVTD+ILR+VP +Q FR +LRC++ WA+RR +YSNV GFLGG+ WA+L
Sbjct: 180 SLNDNLTIIIGSRVTDEILRVVPNVQVFRESLRCIKLWAQRRAIYSNVNGFLGGVAWAML 239
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VARICQLYPN ++++FF + QW+WP+PVLL IE+G L ++VW+P+ P D+ H
Sbjct: 240 VARICQLYPNENAGAVIAKFFTILYQWKWPHPVLLKEIEDGPLKVRVWNPKIYPSDRAHR 299
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MPIITPAYP M S++NV ST +M EF+RG +I + + K W LF FF
Sbjct: 300 MPIITPAYPSMCSTHNVGPSTQEVMRQEFKRGMDILDGIHK--GTTTWSQLFNKHEFFSK 357
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD------ 416
YK+YL+I S + A+ + W G VES++RQL K+E + HP FS+
Sbjct: 358 YKHYLQIIASGQTAESQKKWSGAVESKVRQLVSKLEL-VDGIELAHPFVKGFSEVFICLN 416
Query: 417 -------------------KSKP--------------LYCS-YFMGLQRKQGVP-VGEGE 441
KP +Y S +++GL + P E
Sbjct: 417 DEEVQHAAEYNPSEEVKERSKKPEEYENKEAEDGIHRVYISTFYIGLAIQPRNPETNEKR 476
Query: 442 QFDIRLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVFPGGVR 488
++ EF + ++ G M+I V ++ LP+ VF GG+R
Sbjct: 477 TLNLTYPTNEFMKLTKLWDQFVEGEMKIFVKNIKASALPDVVFEGGIR 524
>gi|119359931|dbj|BAF41975.1| testis-specific poly(A) polymerase [Homo sapiens]
Length = 637
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 246/601 (40%), Positives = 347/601 (57%), Gaps = 64/601 (10%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
R G++ PISLA P + D + T++L + LR ++E +EE R VL +L+ +VK W+++
Sbjct: 20 RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIRE 79
Query: 68 ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
IS +K L +++ KIFTFGSYRLGVH GADID LCV P H R DFF + L
Sbjct: 80 ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 138
Query: 128 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 187
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 139 KLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 198
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GF GG++WA+LVAR C
Sbjct: 199 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFHGGVSWAMLVARTC 258
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 307
QLYPNAV S LV ++F V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIIT
Sbjct: 259 QLYPNAVASTLVRKYFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 318
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
PAYP NS+YNVS ST +M++ F++G I + +A W LFE +FF+ YK+Y+
Sbjct: 319 PAYPQQNSTYNVSISTRMVMIEVFKQGLAITHEILLTKA--VWSKLFEAPSFFQKYKHYI 376
Query: 368 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LY 422
+ SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 377 VLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFR 435
Query: 423 CSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVS--MYTLRKPGMQISVAHV 473
+ +GL K+ E I LT ++ F +QAV+ M+ + GM+I+ H+
Sbjct: 436 TMWVIGLGLKKP---DNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHL 489
Query: 474 TRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLR 533
R+ L + L V K + +GR+ TD N +
Sbjct: 490 RRKEL---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDL 526
Query: 534 NAKCHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELA 576
+A C +M PSS+ + G SP ++ +++S N+Q + ++ NE +
Sbjct: 527 SAGCENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESS 586
Query: 577 G 577
G
Sbjct: 587 G 587
>gi|330340378|ref|NP_001193351.1| poly(A) polymerase beta [Bos taurus]
Length = 642
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/493 (45%), Positives = 311/493 (63%), Gaps = 24/493 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GI+ PISLA P + D + T+KL + L+ ++E +EE R +L +L+ +VK W++
Sbjct: 19 KHYGISSPISLAPPRETDCILTQKLIETLKPFGVFEEEEELQRRILILEKLNNLVKEWIR 78
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 79 EISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 137
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR +P D+YHLMPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVSPSDRYHLMPII 317
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHY 375
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 376 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-F 434
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 474
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ H+
Sbjct: 435 RTMWVIGLVLKKP-ENSEVLSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLK 490
Query: 475 RRN----LPNFVF 483
R+ LPN V
Sbjct: 491 RKELHQLLPNHVL 503
>gi|302846120|ref|XP_002954597.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
gi|300260016|gb|EFJ44238.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
Length = 410
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 274/407 (67%), Gaps = 9/407 (2%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M +++ + + + P++ A PT +D +++LE++LR LYES +EA+ REEVLG Q+
Sbjct: 1 MAAASLEDVYLLRPLNDAPPTAEDKRHSKELEEFLRASGLYESLDEAILREEVLGLFYQL 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
V+IWVK + R + LN +++A A ++TFGSYRLGVHGPG+D+DTL VGPR+ RE DFF
Sbjct: 61 VQIWVKGVCRRRNLN---VEDARAHVYTFGSYRLGVHGPGSDMDTLVVGPRYVLREMDFF 117
Query: 121 GE----LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ 176
G L +L++ P++T++ PVPDA VP++ K+ GV ID+LYA L++ +PE LD+S
Sbjct: 118 GNEKHCLQYLLSQTPDITDIQPVPDAFVPMIGIKYKGVQIDVLYASLAMVTLPEQLDLSN 177
Query: 177 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
++L+ DE TVRSLNGCRVTD ILRLVP FR LR ++ WA RG+ SNV G+LGG
Sbjct: 178 HAVLRGCDEATVRSLNGCRVTDTILRLVPNQDVFRLALRAVKHWASLRGISSNVTGYLGG 237
Query: 237 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 296
+N A++VA+ICQLYP A S ++ +FF + W WP + L E+ S+GL VWDPR
Sbjct: 238 VNLAIMVAKICQLYPRAEASTVLLKFFILLKAWPWPRAIHLRVPEDHSMGLPVWDPRPGT 297
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD--VDWDTLF 354
+D LMP+ITPAYP MNS YNV STL +M EF E+C + + +DWD LF
Sbjct: 298 RDSLALMPVITPAYPAMNSLYNVQRSTLEVMTAEFAAAAEVCTSFLRCRGGQPLDWDRLF 357
Query: 355 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT 401
P FF + Y++I++SA++ DL W GWV SR+R+L +E H
Sbjct: 358 MPVPFFTQHTFYIQIEVSADSEQDLVLWDGWVSSRIRRLVRNLEDHV 404
>gi|312067061|ref|XP_003136565.1| hypothetical protein LOAG_00977 [Loa loa]
gi|307768265|gb|EFO27499.1| hypothetical protein LOAG_00977 [Loa loa]
Length = 859
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/503 (42%), Positives = 314/503 (62%), Gaps = 38/503 (7%)
Query: 2 GSSNGQ-------RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL 54
G+SNG+ LG+++PIS++GP + D++ + KL++YL+ +E++EE R +VL
Sbjct: 139 GNSNGKDNKLTTTYLGVSQPISISGPDEFDIVMSAKLDEYLQANGYFETEEEMNLRLKVL 198
Query: 55 GRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHAT 114
+++ VK WV+ +S+ + + D +Q K+FTFGSYRL VH GADID+LCV PRH
Sbjct: 199 SKINAYVKKWVRVVSKRRQMPDSEVQSVGGKLFTFGSYRLNVHTRGADIDSLCVAPRHVD 258
Query: 115 REEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDI 174
R DFF ++ML E P TEL V +A VPV+K K+ G+ +D+L+ARL+L +PED +
Sbjct: 259 RN-DFFTSFYEMLAEDPNTTELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQQL 317
Query: 175 SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 234
+ DSIL+N DE++VRSLNGCRV D+ILRLVP + NF LR ++ WAK G+YSNV G+L
Sbjct: 318 NDDSILRNLDEKSVRSLNGCRVADEILRLVPNVSNFTYALRAIKLWAKNHGIYSNVLGYL 377
Query: 235 GGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG------SLGLQ 288
GG++WA+LVAR CQLYPN P+ LV +FF +YT+W WP+PV+L E +L
Sbjct: 378 GGVSWAILVARTCQLYPNTGPARLVQKFFLLYTKWEWPHPVVLKETEVSHARDMPALQEL 437
Query: 289 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 348
VWDPR D++HLMPI+TPA+P NS++NV+ S+L+I+M+E + G + K +A
Sbjct: 438 VWDPRSRSGDRFHLMPIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKA-- 495
Query: 349 DWDTLFEPFTFFEAYKNYLR-IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQC 407
+W LFE FF YK++L + +SA D+L W G VES++R L +ER ++ C
Sbjct: 496 EWSALFEEVNFFSRYKHFLALLCLSATEQDELV-WCGLVESKIRFLIASLERRE-SIRVC 553
Query: 408 HPHPGDFSDKSKPLYCS----------YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV- 456
H H + ++ PL +F+GL + V + DI+ V+ F +
Sbjct: 554 HVHTKYYQPRNDPLPVQVSLQNPRCRLWFIGLDLNKTV----SRKIDIQHEVQSFMDLLN 609
Query: 457 SMYTLRK---PGMQISVAHVTRR 476
SM T + GM + + H R+
Sbjct: 610 SMATTQNIYVEGMSV-IPHYLRK 631
>gi|302684083|ref|XP_003031722.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
gi|300105415|gb|EFI96819.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
Length = 558
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/501 (42%), Positives = 304/501 (60%), Gaps = 29/501 (5%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PIS A + +D T L + LR + +ES +E+ +RE VLGR+ +VK +V +
Sbjct: 6 LGVTPPISTAESSAEDQKLTESLMQELRAQSTFESDQESRTREIVLGRISALVKKFVTTV 65
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
++A GL+D A KIFTFGSYRLGVHGPG+DIDTLCV P+H R+E FF ML
Sbjct: 66 AKAHGLSDATANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVNRDE-FFSVFEPMLR 124
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQT 187
E P +TE+ VPDA VP++K K G+ +DLL AR+ L IP+DL + + +L+N DE+
Sbjct: 125 EEPNITEVSGVPDAFVPIIKIKMMGIPLDLLMARMVQLSSIPDDLSLQNNELLRNLDERC 184
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
++SL G R+ D+IL L+P Q FR LRC++ WA+RR +YSN+ GFLGG+ WA+LVARIC
Sbjct: 185 IKSLGGSRLVDEILSLIPNHQVFRDALRCIKLWAQRRAIYSNINGFLGGVAWAMLVARIC 244
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 307
QLYPNAV +V RFF + +W+WP PVLL IEEG L +++W+P+ P D+ H MPIIT
Sbjct: 245 QLYPNAVAGTIVRRFFGIMWRWQWPQPVLLKQIEEGPLEVRIWNPQVYPSDRAHRMPIIT 304
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
P+YP MNS++NVS ST +M+ EF+RG +I ++K EA W LF TFF +++YL
Sbjct: 305 PSYPSMNSTHNVSYSTQTVMIHEFKRGLDIVGQIQKGEA--SWADLFNKHTFFTDFRHYL 362
Query: 368 RIDISAENADDLRNWKGWV-----ESRLRQLTLKIERHTYNMLQC-------HPHPGDFS 415
+I SA++ W+ + E + Q+T + + C G FS
Sbjct: 363 QIVASADDQHSHDKWQLVLRLDAQEGSIIQVTRPFIKGFERIYHCISDDERRAATEGRFS 422
Query: 416 -----------DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY-TLR 462
DK+ +Y + +F+GL+ K Q +I EF V + T
Sbjct: 423 DLKAAEGRPAGDKTTTVYTTAFFLGLEFKPKDGNSGTRQLNISFPTGEFCNLVKKWETYD 482
Query: 463 KPGMQISVAHVTRRNLPNFVF 483
+ M+++V H+ R LP FV+
Sbjct: 483 ETKMRVNVRHIKRSELPEFVY 503
>gi|342321329|gb|EGU13263.1| Endochitinase [Rhodotorula glutinis ATCC 204091]
Length = 703
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 244/595 (41%), Positives = 334/595 (56%), Gaps = 71/595 (11%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWV 65
GQ LG+T PIS+A PT DL ++ L + L+D +YES EE +RE VLGRL+++VK +V
Sbjct: 3 GQFLGVTPPISVAPPTARDLEVSKTLIQELKDRGIYESAEEGRNREMVLGRLNKLVKEFV 62
Query: 66 KKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
+ S GL+D +EA KIFTFGSYRLGVHGPG+DIDTL V PRH REE FF Q
Sbjct: 63 YRSSINHGLSDAKAREAGGKIFTFGSYRLGVHGPGSDIDTLLVVPRHVEREE-FFSLFEQ 121
Query: 126 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 185
ML E V E+ VP+A VP++K FSG+ IDLL+ARL++ +P+DLD+ D++L+N D+
Sbjct: 122 MLKETEGVLEVTGVPEAFVPIIKCTFSGIDIDLLFARLAVPTVPDDLDLKDDNLLRNIDD 181
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
+ +RSLNG RVTD++LRLVP + FR LR ++ WA++R +Y NV GF GG+ WA+LVAR
Sbjct: 182 RCLRSLNGSRVTDEMLRLVPDVPVFREALRTIKLWAQQRAIYGNVMGFCGGVAWAMLVAR 241
Query: 246 ICQLYPNAVPSMLVS--------------------RFFRVYTQWRWPNPVLLCAIEEGSL 285
ICQLYP ++S RFF + QW+WP PVLL IEEG L
Sbjct: 242 ICQLYPKGCVGSIISRCVMCFQLRHVRSSPTGSLRRFFIIMHQWQWPAPVLLKPIEEGPL 301
Query: 286 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 345
++VW+P+ P D+ H MPIITPAYP M S++NV+ ST +IM EF+R +I + +
Sbjct: 302 QVRVWNPKLYPSDRSHRMPIITPAYPSMCSTHNVTLSTQQIMTAEFKRAADIVDKVFVGS 361
Query: 346 ADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 405
A W LF+P FF Y+ YL+I S+ +AD W G VESR+RQL +K+E + +L
Sbjct: 362 A--KWSELFQPHDFFSKYRYYLQITASSGSADVQLKWSGTVESRIRQLVMKLE-YVDTLL 418
Query: 406 QCHPHPGDFSDKSKPLYC-------------------------------------SYFMG 428
HP F + YC ++++G
Sbjct: 419 LAHPFVKSFDRVN---YCINEEEQRAVSIGEVPAAVDKRTEQDLIAGQGGTVYTTTFYIG 475
Query: 429 LQRKQGVPVGEG--EQFDIRLTVKEFKQAVSMYTLRKP-GMQISVAHVTRRNLPNFVFPG 485
LQ ++ P G+ + DI EF + V M+ P M + V ++ LP +V G
Sbjct: 476 LQIERK-PAGDKGPRKLDISYPTNEFTKLVKMWDSYDPDSMGVIVRYIKSTALPAYVHAG 534
Query: 486 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 540
R P K R ++ S+ A TDD+ HL N K A+
Sbjct: 535 --REPEPPKTGGVKRAKTKKANGSNAATAASPALANAATDDSDAEHL-NKKHRAS 586
>gi|170593997|ref|XP_001901750.1| Poly polymerase central domain containing protein [Brugia malayi]
gi|158590694|gb|EDP29309.1| Poly polymerase central domain containing protein [Brugia malayi]
Length = 842
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/489 (42%), Positives = 305/489 (62%), Gaps = 31/489 (6%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+++PIS++GP + D++ + KL++YL+ +E++EE R +VL +++ VK WV+ +
Sbjct: 149 LGVSQPISISGPDEFDIVMSTKLDEYLQANGYFETEEEMNLRLKVLSKINAYVKKWVRIV 208
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S+ + + D +Q K+FTFGSYRL VH GADID+LCV PRH R DFF ++ML
Sbjct: 209 SKRRQMPDSEIQSVGGKLFTFGSYRLNVHTRGADIDSLCVAPRHVDRN-DFFTSFYEMLA 267
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
E P TEL V +A VPV+K K+ G+ +D+L+ARL+L +PED ++ DSIL+N DE++V
Sbjct: 268 EDPNTTELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQQLNDDSILRNLDEKSV 327
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRV D+ILRLVP I NF LR ++ WAK G+YSNV G+LGG++WA+LVAR CQ
Sbjct: 328 RSLNGCRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQ 387
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG------SLGLQVWDPRRNPKDKYHL 302
LYPN P+ LV +FF +YT+W WP+PV+L E SL VWDPR D++HL
Sbjct: 388 LYPNTGPARLVQKFFLLYTKWEWPHPVVLKETEISHARDMPSLQELVWDPRSRSGDRFHL 447
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MPI+TPA+P NS++NV+ S+L+I+M+E + G + K + W LFE FF
Sbjct: 448 MPIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKT--GWSALFEEVNFFSR 505
Query: 363 YKNYLR-IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
YK++L + +SA D+L W G VES++R L +ER ++ CH H + ++ P
Sbjct: 506 YKHFLALLCLSATEQDELV-WCGLVESKIRFLIASLERRE-SIRVCHVHTKYYQPRNDPF 563
Query: 422 YCS----------YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV-SMYTLRK---PGMQ 467
+F+GL + V + DI+ V+ F + SM T + GM
Sbjct: 564 PVQVSLQNPRCRLWFIGLDLNKTV----SRKIDIQHEVQSFMDLLNSMATTQNIYVEGMS 619
Query: 468 ISVAHVTRR 476
+ + H R+
Sbjct: 620 V-IPHYLRK 627
>gi|17536297|ref|NP_496067.1| Protein T15H9.6 [Caenorhabditis elegans]
gi|3879808|emb|CAA87419.1| Protein T15H9.6 [Caenorhabditis elegans]
Length = 554
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/506 (41%), Positives = 305/506 (60%), Gaps = 21/506 (4%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
+S+ G+++PIS A P +D+ T L+ L + +ES++E + R +VL LD +V
Sbjct: 7 ATSSTPIFGVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLV 66
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WV+K + ++ DQ+ A K+ FGSYRLGVH GADID++ V PRH TR DFF
Sbjct: 67 KDWVQKTTISRIPKDQMFN-AGGKLIPFGSYRLGVHSSGADIDSIVVAPRHITRS-DFFN 124
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
+L + PEVTEL V A VP+M K+SGV ID+L+ARL+L +PEDL+I DS+L+
Sbjct: 125 SFKDILAKNPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLK 184
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N DE++VRSLNGCRV +Q+L+LVP +NF TLR ++ WAK G+YSN GF GGI WA+
Sbjct: 185 NLDEESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAI 244
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-----EEGSLGLQVWDPRRNP 296
LVARICQLYPNA PS L+ + F +++ W WP PVLL I + L VWDPRRN
Sbjct: 245 LVARICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNH 304
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 356
D+YHLMPIITPA+P NS++NVS S+++++ DE ++ IC+ + +E ++W L E
Sbjct: 305 ADRYHLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKI--HEGTLEWRDLLEE 362
Query: 357 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
FF Y +++ + + AE+ + + G+ ESR+RQL +E++ + +P F D
Sbjct: 363 INFFSKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQILEKNQVIQV-AQINPRKFKD 421
Query: 417 KSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISV-- 470
P +F+GL+ V + D+ +++FK + ++ G Q+
Sbjct: 422 VKDPKKSIWFIGLEF-----VANVKNVDLTSDIQQFKMNIDRQSMSVKEIAAGCQVETDF 476
Query: 471 AHVTRRNLPNFVFPGGVRPSRPSKGT 496
+ R NL N + + R K T
Sbjct: 477 TYEKRSNLINIISKKDLSCQRIMKKT 502
>gi|238882575|gb|EEQ46213.1| Poly(A) polymerase [Candida albicans WO-1]
Length = 558
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/413 (46%), Positives = 284/413 (68%), Gaps = 5/413 (1%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N + G+TEPIS GPT + + L + L++ +ES++ R EVL ++V+ +
Sbjct: 2 NTKTYGVTEPISTNGPTPKENILNDALIQELKNRGSFESEQATKKRVEVLTLFQRLVQEF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V +S++K ++D + Q+A K+FTFGSYRLGV+GPG+DIDTL V P+H TR+ DFF
Sbjct: 62 VYTVSKSKNMSDSMAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFA 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++ + PE+ E+ VPDA+VP++K +F G+SIDL+ ARL++ +P DL + ++L+N D
Sbjct: 121 DIIRKRPELEEIACVPDAYVPIIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLD 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVA
Sbjct: 181 EKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV S +V +FF +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP
Sbjct: 241 RICQLYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N+++ST ++++ E RG I + + + W LFE +FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKK--TWSDLFEKHSFFYKYK 358
Query: 365 NYL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
YL + S ++A++ + W G++ES+LRQL LK+E + HP+ DFS+
Sbjct: 359 FYLCVVAASIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSN 410
>gi|68482706|ref|XP_714750.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
gi|3334283|sp|O42617.1|PAP_CANAL RecName: Full=Poly(A) polymerase PAPalpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|2696030|dbj|BAA23802.1| poly A polymerase [Candida albicans]
gi|5771514|gb|AAD51412.1| unknown [Candida albicans]
gi|46436342|gb|EAK95706.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
Length = 558
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/413 (46%), Positives = 284/413 (68%), Gaps = 5/413 (1%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N + G+TEPIS GPT + + L + L++ +ES++ R EVL ++V+ +
Sbjct: 2 NTKTYGVTEPISTNGPTPKENILNDALIQELKNRGSFESEQATKKRVEVLTLFQRLVQEF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V +S++K ++D + Q+A K+FTFGSYRLGV+GPG+DIDTL V P+H TR+ DFF
Sbjct: 62 VYTVSKSKNMSDSMAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFA 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++ + PE+ E+ VPDA+VP++K +F G+SIDL+ ARL++ +P DL + ++L+N D
Sbjct: 121 DIIRKRPELEEIACVPDAYVPIIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLD 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVA
Sbjct: 181 EKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV S +V +FF +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP
Sbjct: 241 RICQLYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N+++ST ++++ E RG I + + + W LFE +FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKK--TWSDLFEKHSFFYKYK 358
Query: 365 NYL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
YL + S ++A++ + W G++ES+LRQL LK+E + HP+ DFS+
Sbjct: 359 FYLCVVAASIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSN 410
>gi|19112154|ref|NP_595362.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe 972h-]
gi|26397523|sp|Q10295.1|PAP_SCHPO RecName: Full=Poly(A) polymerase pla1; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|1419256|emb|CAA56141.1| polymerase [Schizosaccharomyces pombe]
gi|4160340|emb|CAA22808.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe]
Length = 566
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/392 (49%), Positives = 273/392 (69%), Gaps = 3/392 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GIT PIS A T+ + L L++ NL+ES E+ R +VL L QI +VK
Sbjct: 4 KQWGITPPISTAPATEQENALNTALINELKNQNLFESPAESEKRVKVLDELQQITTEFVK 63
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
K+S AK +N+++ EA KIFT+GSYRLGV+GPG+DIDTL V P+H +R+ +FF +L M
Sbjct: 64 KVSLAKHMNEKMANEAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSRD-NFFQDLEPM 122
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L E EVT+L VPDA+VP++KFKF G+SIDL++ARLS+ +P DL++S +++L+ +E+
Sbjct: 123 LREREEVTDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEER 182
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
V SLNG RVTDQIL+LVP F+ LR ++FWA+RR +Y+NV GF GG+ WA++VARI
Sbjct: 183 CVLSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARI 242
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV S++V++FFR+ QW WP P+LL IE+G L +++W+P+ P DK H MPII
Sbjct: 243 CQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPII 302
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP M +++N++ ST I++ E R EI + + + W LF+ FF YK+Y
Sbjct: 303 TPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKA--LPWSALFQKHDFFHRYKHY 360
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIE 398
L I +A+ A+ W G VES+LR L ++E
Sbjct: 361 LTITAAAKTAEAQLKWAGLVESKLRHLVTRLE 392
>gi|10835833|pdb|1F5A|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 513
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/481 (45%), Positives = 300/481 (62%), Gaps = 14/481 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAXLVART 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHL PII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLXPII 316
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVS ST + ++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRXVXVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 421
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRN 477
+ +GL K+ E D+ ++ F V + + I+ HV R+
Sbjct: 434 RTXWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKXFEVDXKIAAXHVKRKQ 492
Query: 478 L 478
L
Sbjct: 493 L 493
>gi|401409652|ref|XP_003884274.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
gi|325118692|emb|CBZ54243.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
Length = 701
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/503 (43%), Positives = 312/503 (62%), Gaps = 35/503 (6%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
G+T P+++ P D D+ R+ +L LR +NLYE+ + RE VL L++IV WV ++
Sbjct: 116 FGVTNPVNMKLPQDADIHRSNELISVLRALNLYETAAGNLLRERVLNELNRIVVEWVVEV 175
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+GL++Q ++A KIFTFGSYRLGV PG+DIDTLCV PRH TRE FF LH L
Sbjct: 176 GMEQGLDEQEARQAGGKIFTFGSYRLGVTTPGSDIDTLCVTPRHVTREA-FFKILHAKLQ 234
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQT 187
+ V++L PVPDA+ PV+KF F GV IDLL+ARL L VIP + + D +L++ DE+T
Sbjct: 235 QDARVSKLTPVPDAYTPVLKFNFDGVEIDLLFARLPLPVIPSSWNSLENDFVLRHVDEKT 294
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
RS+NG RV D +L+LVP + F+ TLR ++ WAK RG+YSNV G+LGGI+WA+LVAR C
Sbjct: 295 ARSVNGSRVADLVLKLVPNKETFKVTLRFVKHWAKVRGIYSNVLGYLGGISWAILVARCC 354
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIE----EGSLGLQVWDPRRNPKDKYHL 302
QLYPN PS L+ RFF VY+ W+W N PVLLC I+ EG ++W+P+ N +D++HL
Sbjct: 355 QLYPNFAPSQLIHRFFTVYSIWKWKNSPVLLCKIKEHTVEGLSNFKIWNPKVNVQDRHHL 414
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW----DTLFEPFT 358
+PIITPA+P MNS++NVS ST R++ DEF I + +K + ++ W + +P
Sbjct: 415 LPIITPAFPSMNSTHNVSLSTKRVITDEFANAKRIFDVWDKKK-EISWTEALHLVLKPLD 473
Query: 359 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH-PGDFSDK 417
F ++K++L + I A+N R W GWVES++R L ++ER + C P G + K
Sbjct: 474 -FTSFKHFLELQIFAQNETVHRKWLGWVESKVRFLVRQLER----LAACPPFAAGGHTPK 528
Query: 418 S------KPLYCSYFM---GLQRKQG--VPVGEGEQ---FDIRLTVKEFKQAVSMYTLR- 462
S +P+ C++ G + V + +Q D+R EF ++ + R
Sbjct: 529 SEAAMTVRPIPCTFSFQEPGWEYASSMLVALNFAQQPCVIDLRPAAGEFVDLINQWPERA 588
Query: 463 --KPGMQISVAHVTRRNLPNFVF 483
+ +Q+ V HV R LP +V
Sbjct: 589 QLEGQIQLRVKHVRRSQLPAYVL 611
>gi|241955483|ref|XP_002420462.1| poly(A) polymerase, putative; polynucleotide adenylyltransferase,
putative [Candida dubliniensis CD36]
gi|223643804|emb|CAX41541.1| poly(A) polymerase, putative [Candida dubliniensis CD36]
Length = 558
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/412 (45%), Positives = 283/412 (68%), Gaps = 5/412 (1%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N + G+TEPIS GPT + + L + L++ +ES++ R EVL Q+V+ +
Sbjct: 2 NTKTYGVTEPISTNGPTPKENILNDTLIQELKNRGSFESEQATKKRVEVLTLFQQLVQEF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V +S++K ++D + Q+A K+FTFGSYRLGV+GPG+DIDTL V P+H TR+ DFF
Sbjct: 62 VYTVSKSKNMSDAMAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFA 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++ + PE+ E+ VPDA+VP++K +F G+SIDL+ A+L++ +P DL + ++L+N D
Sbjct: 121 DIIRKRPELEEIACVPDAYVPIIKIEFDGISIDLIMAKLNIPRVPLDLTLDDKNLLKNLD 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVA
Sbjct: 181 EKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV S++V +FF +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP
Sbjct: 241 RICQLYPNAVSSVIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N+++ST ++++ E RG I + + + W LFE FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILAELSRGSSIMQDIHAGKK--SWSDLFEKHCFFYKYK 358
Query: 365 NYL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
YL + + ++A++ + W G++ES+LRQL LK+E + HP+ DFS
Sbjct: 359 FYLCVVAATIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFS 409
>gi|344301689|gb|EGW31994.1| Poly(A) polymerase PAPalpha [Spathaspora passalidarum NRRL Y-27907]
Length = 556
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/425 (45%), Positives = 282/425 (66%), Gaps = 12/425 (2%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
NG+ G+T+PIS A PT + L + L++ +E++ R EVL ++V+ +
Sbjct: 2 NGKAYGVTDPISTANPTPRENSLNDSLIQELKNRGSFENESATKKRAEVLALFQKMVQEF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V +S++K ++D + ++A K+FTFGSYRLGV+GPG+DIDTL V P+H TRE DFF
Sbjct: 62 VYTVSKSKNMSDGMAKDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRE-DFFTVFE 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
Q++ + PE+ E+ VPDA VP++K +F G+SIDL+ ARL++ +P D+ + ++L+N D
Sbjct: 121 QIIRKRPELQEIASVPDAFVPIIKIEFDGISIDLILARLNVPRVPLDMTLDDKNLLKNID 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY NV GF GG+ WA+LVA
Sbjct: 181 ERDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVFGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV +++V +FF +YT+W WP PVLL IE+G L ++VW+PR P D+ H MP
Sbjct: 241 RICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRLHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N+++ST +++M E RG E+ + N W L E FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVIMSELARGAEVMNQI--NLGKSSWSALLERHDFFHKYK 358
Query: 365 NYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 423
YL I + ++D+ W G VES+LR L LK+E T + HP+ DFSD
Sbjct: 359 FYLCIVAATTSSDEEHLKWSGLVESKLRHLVLKLEV-TDGIELAHPYVKDFSD------- 410
Query: 424 SYFMG 428
SY +G
Sbjct: 411 SYILG 415
>gi|430811842|emb|CCJ30698.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 639
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/459 (44%), Positives = 303/459 (66%), Gaps = 15/459 (3%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N ++ G+T P+S+AGPT+ ++ L L+ +ES EE+ R +VLG L +I +
Sbjct: 58 NERQWGVTPPVSMAGPTEHEIAVNAALIDELKLRKNFESPEESDKRAKVLGELQKITLEF 117
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V+K+S K + + + ++A KIFT+GSYRLGV+ PG+DIDTL V PRH TRE +FF +
Sbjct: 118 VQKVSLDKHMTESMARDAGGKIFTYGSYRLGVYSPGSDIDTLMVVPRHVTRE-NFFTDFE 176
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
Q+L PEVT + VPDA+VP++KFKFSG+ IDL++ARL+L +P DL + +++L+N +
Sbjct: 177 QILRNRPEVTGITAVPDAYVPIIKFKFSGIPIDLIFARLALAQVPMDLTLEDNNLLKNVE 236
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ V SLNG RVTD+ILRLVP F+ LR ++ WA++R +YSNV GF GG+ WA+LVA
Sbjct: 237 ERCVLSLNGTRVTDEILRLVPNPTIFKHALRAIKLWAQQRAIYSNVMGFPGGVAWAMLVA 296
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV ++++++FFR+ +QW+WP PVLL IE+G L ++VW+P+ D+ H MP
Sbjct: 297 RICQLYPNAVSAVVIAKFFRILSQWKWPQPVLLKPIEDGPLQVRVWNPKIYKGDQAHRMP 356
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITPAYP M S++N++ ST +++++E R +I + + + W TLF TFF YK
Sbjct: 357 IITPAYPSMCSTHNITESTQKVIINEMNRAGDIADKIL--NGTLPWSTLFAKHTFFHQYK 414
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 424
YL I ++++A+ W G VES++RQL L++E + + HP F+ + L+
Sbjct: 415 YYLVIVAASKSAEMQLKWSGLVESKVRQLVLRLE-YVDEIKLAHP----FNKSTDSLH-- 467
Query: 425 YFMGLQRKQGVPVGE-----GEQFDIRLTVKEFKQAVSM 458
Y + GV GE E +++ T+KE + +M
Sbjct: 468 YCKTEEEANGVAHGELVSTRMENINMQQTIKEMESTSNM 506
>gi|391336102|ref|XP_003742422.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 576
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/570 (39%), Positives = 324/570 (56%), Gaps = 59/570 (10%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G+ + G+T PIS+A P DL ++++LE L + L+ES E R +VLGR++++V
Sbjct: 10 GTRGEKYPGVTAPISVALPRPVDLDKSKELEAVLHEFGLFESASELDHRLQVLGRINELV 69
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
+ W++++S AKG+ + + KIFTFGSYRLGVH GADIDTLCV PRH R DFF
Sbjct: 70 QQWIQEVSIAKGVPENIASSTRGKIFTFGSYRLGVHTKGADIDTLCVAPRHVERT-DFFT 128
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + P+V +L V +A+VPV+K +F G+ D+L+ARL+L IP D ++ ++L+
Sbjct: 129 SFVELLKQQPQVRDLRAVEEAYVPVIKMEFDGIEFDMLFARLALKDIPPDQELRDMTLLK 188
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D + VRSLNGCRVTD+IL LVP I FRT LR ++ WAK++GVYSNV G+LGG++WA+
Sbjct: 189 NLDAKCVRSLNGCRVTDEILHLVPDIPVFRTALRTIKLWAKKKGVYSNVLGYLGGVSWAM 248
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL---CAIEEGSLGLQVWDPRRNPKD 298
LVAR CQLYP+A +++V +FF V++QW WP PV L A + G VWD R N D
Sbjct: 249 LVARTCQLYPHAAAAVVVQKFFLVFSQWPWPKPVHLRTQTAAHQHLGGFSVWDSRTNVAD 308
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
+YHLMPIITP YP NS++N S ST IM F+ G + E + K + W LF P
Sbjct: 309 RYHLMPIITPVYPEQNSTFNTSLSTRTIMTKAFKEGLAVTENILKGKG--TWHDLFSPPE 366
Query: 359 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER-----------HTYNMLQ- 406
FF YK ++ + A +DL W G VES++R L + +ER +YN ++
Sbjct: 367 FFGQYKTFIMLTAVANTKEDLLTWYGLVESKIRTLIISLERVPCIEIAHVNPKSYNKVKE 426
Query: 407 -------------------CHPHPGDFSDKSKPLY------CSYFMGLQRKQGVPVGEGE 441
P + +K++P ++F+GL Q E
Sbjct: 427 DKPPAEPVKEQQEESPKASAETEPNETEEKAEPKPQEETEGVNWFIGLHFGQ---TKEKL 483
Query: 442 QFDIRLTVKE-----FKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 496
D+ V+ F+QA ++ L K GM + V + RR+L + P V P
Sbjct: 484 NLDLTENVRNLRDVIFRQAENIKIL-KDGMDVEVRVLKRRDLATVLPPEEVALLPPP--- 539
Query: 497 WDSRRALERKVSSHTKPGADDGRKRKQTDD 526
+ +R RK S + A++ KR + DD
Sbjct: 540 -EKKRKSIRKASEES---AENPSKRIKEDD 565
>gi|159489342|ref|XP_001702656.1| poly(a) polymerase [Chlamydomonas reinhardtii]
gi|158280678|gb|EDP06435.1| poly(a) polymerase [Chlamydomonas reinhardtii]
Length = 407
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/407 (46%), Positives = 270/407 (66%), Gaps = 9/407 (2%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M ++ + + P++ + P+ +D + +LE++LRD LYE E+A R+EVLG ++
Sbjct: 1 MAVADPNDVYLLRPLNNSLPSAEDKRHSAELEQFLRDAGLYEPDEDAYLRQEVLGLFYEL 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+ WVK + R K LN +++A A ++TFGSYRLGVHGPGAD+DTL VGPR+ R+ DFF
Sbjct: 61 TQTWVKGVCRKKNLN---VEDARAHVYTFGSYRLGVHGPGADMDTLVVGPRYVLRDSDFF 117
Query: 121 GE----LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ 176
G L ML++ P++T++ PVPDA VP++ K+ GV ID+LYA L++ +PE LD+S
Sbjct: 118 GSEKHCLEYMLSQTPDITDIQPVPDAFVPMIGIKYKGVQIDILYASLAMQTLPEQLDLSN 177
Query: 177 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
++L+ DE TVR+LNGCRVTD +L+LVP+ + FRT LR ++ WA RG+ SNV G+LGG
Sbjct: 178 HAVLRGCDEPTVRALNGCRVTDTMLKLVPRQEVFRTALRAVKHWASLRGISSNVTGYLGG 237
Query: 237 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 296
+N A++VA+ICQLYP A S ++ +FF + W WP + L EE SLGL VWDPR
Sbjct: 238 VNLAIMVAKICQLYPRAEASTVLLKFFILLKAWPWPRAIHLRIPEEHSLGLPVWDPRPGT 297
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEA--DVDWDTLF 354
+D LMP+ITPAYP MNS YNV STL +M +EF ++C + ++W LF
Sbjct: 298 RDSLALMPVITPAYPAMNSLYNVQRSTLEVMTEEFAAAADVCTSFLHCPPGKPIEWSRLF 357
Query: 355 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT 401
P FF + Y+++++SA++ DL W GWV SR+R+L +E H
Sbjct: 358 TPVPFFTQHSFYIQLEVSADSEGDLVLWDGWVSSRIRRLVRNLEDHV 404
>gi|402226328|gb|EJU06388.1| polymerase [Dacryopinax sp. DJM-731 SS1]
Length = 620
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 233/580 (40%), Positives = 330/580 (56%), Gaps = 59/580 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + G T+PIS P + ++ T +L + L +ES+EE RE+VLGR+ +
Sbjct: 1 MAEQEQVQWGTTKPISWNPPQEKEIKATERLMEELHHQGSFESEEEGRLREQVLGRIAGL 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK +V+K+S + G +++ + A AKIFT GSYRLGVHGPG+DIDT+CV P+H +RE FF
Sbjct: 61 VKQFVEKVSVSFGFSEEAAKAAGAKIFTSGSYRLGVHGPGSDIDTICVVPKHVSREH-FF 119
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
ML M VTE+ VP+A VPV+K SG+ +D L+ARL+L IP+DL++ D++L
Sbjct: 120 TVFEPMLLNMEGVTEVSGVPEAFVPVIKAIVSGIHVDFLFARLNLTQIPDDLELKDDNLL 179
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N DE+ VRSL G RVTD+ILRLVP+ FR LR ++ WA+RR +YSNV GFLGG+ WA
Sbjct: 180 RNLDERDVRSLGGSRVTDEILRLVPQPVVFRDALRAVKLWAQRRAIYSNVIGFLGGVAWA 239
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVARICQL+P + ++SRFF + QW WP P+LL AIE+G L ++VW+P+ P D+
Sbjct: 240 MLVARICQLFPKYDAASILSRFFHIIGQWAWPQPILLKAIEDGPLNVRVWNPQIYPSDRT 299
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP M +++NV+ ST++IM +E +RG +I E + +A W LFE FF
Sbjct: 300 HLMPIITPAYPSMCATHNVTHSTMKIMQNELRRGSQIVEKI--IQAGEPWANLFEKHDFF 357
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP----------- 409
Y+ YL+I I++ N + W G VES++R L K+E + HP
Sbjct: 358 HMYRYYLQIIITSGNQEMYHKWAGTVESKIRLLVGKLELQEAVEI-AHPFTKGLDQVVCC 416
Query: 410 -------------------------HPGDFSDKSKPLYCSYFMGLQRKQGV---PVGEG- 440
H G SK ++++GL GV P G+
Sbjct: 417 LNDDEVRAVAKYEMDDEVLKRSETEHEGK-DGVSKVFMKTFYIGL----GVEPKPAGQTG 471
Query: 441 -EQFDIRLTVKEFKQAVSMYTL-RKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT-- 496
+ DI EF + V ++ L + M I + +V LP+ F GGVR + KG
Sbjct: 472 PRKLDISYPTIEFVKTVKLWDLYEEEQMGIVIRYVKHSALPDNCFEGGVRQALAGKGVKR 531
Query: 497 -----WDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTH 531
D ++ L R S H G K+++ D H
Sbjct: 532 TKSKAGDGKKPLSR-TSPHDVSGDYSPHKKQRKDSLTGDH 570
>gi|345492821|ref|XP_001602912.2| PREDICTED: poly(A) polymerase gamma-like [Nasonia vitripennis]
Length = 605
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/495 (41%), Positives = 296/495 (59%), Gaps = 32/495 (6%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N + LG+T IS+A P DL RT +L++ L+ N++ES+EE R E+L +L+ +VK W
Sbjct: 21 NLRTLGMTSAISMAEPKLSDLSRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQW 80
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
++ S A+ + + + KI+TFGSYRLGVH GADID LCV PRH R D+F
Sbjct: 81 IRDTSIARNMPPNVADQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHINRS-DYFSSFF 139
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
+L EVT+L V +A+VPV+K F G+ ID+L+A+L+L +P+ +D+ D +L+N D
Sbjct: 140 DLLKSQMEVTDLRAVEEAYVPVIKMNFDGIEIDMLFAKLALKEVPDSMDLRDDMLLKNLD 199
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVA
Sbjct: 200 QKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKKNGIYSNVLGYLGGVSWAMLVA 259
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
R CQLYPNAV + L+ +FF V++QW+WP PVLL + E +LG QVWDPR
Sbjct: 260 RTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKSPENVNLGFQVWDPR----------- 308
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
V+ S IM + F+ G I E + +A WD LFEP FF Y+
Sbjct: 309 --------------VTMSDRTIMQEAFETGLAITEEIIMGKA--SWDKLFEPPNFFGKYR 352
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---SDKSKPL 421
+Y+ + S+ A+D W G VES++R L +ER+ N+ H +P F ++
Sbjct: 353 HYIVLLASSSTAEDQLEWCGLVESKIRHLIGTLERNP-NITLAHINPESFPPLKPEAGKH 411
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
+F+GL K+G + DI+ V+ ++ L K GM I HV R++L N+
Sbjct: 412 VSMWFIGLTFKKGENLNIDLTMDIKSFVETTERQAEQIKLFKNGMTIEAKHVKRKDLSNY 471
Query: 482 VFPGGVRPSRPSKGT 496
+ ++ R + +
Sbjct: 472 IAANQIKRERKTSSS 486
>gi|17533995|ref|NP_496524.1| Protein F43G6.5 [Caenorhabditis elegans]
gi|5832750|emb|CAA90398.2| Protein F43G6.5 [Caenorhabditis elegans]
Length = 554
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/453 (45%), Positives = 286/453 (63%), Gaps = 15/453 (3%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
G+++PIS A P DL T L+K L N YE QEE R +VL +L+ VK W++KI
Sbjct: 19 FGVSQPISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLNGCVKQWIQKI 78
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ A+ DQL A ++ FGSYRLGVH GADIDTL + PRHATR DFF QML
Sbjct: 79 TEARYPKDQLFN-AGGQLMAFGSYRLGVHSSGADIDTLVLAPRHATRA-DFFSSFKQMLA 136
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+ PEVT L V +A VP+M K+SG+ ID L+ARL+L +PEDLDI D++L+N D+++V
Sbjct: 137 KDPEVTNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQESV 196
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRV + +L+LVP +NF TLR ++ WAK G+YSN GF GGI WA+LVAR CQ
Sbjct: 197 RSLNGCRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQ 256
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ-----VWDPRRNPKDKYHLM 303
LYPNA PS L+ + F +++ W+WP PVLL I + L VWDPRRN D+YHLM
Sbjct: 257 LYPNASPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLM 316
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PI+TPA+P NS++NVS S+++++ +E + C+ ++ +W L E FF Y
Sbjct: 317 PIVTPAFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQ--NGSCNWMDLLEEINFFSRY 374
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 423
K+++ + ++AE D + G+ ESR+RQL L +E++ L H +P F P
Sbjct: 375 KHFISLSMTAETEKDELAFGGFFESRIRQLVLILEKNQGIKL-AHINPKKFKAAKDPKKS 433
Query: 424 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 456
+F+GLQ + V + D+ +++FK+ +
Sbjct: 434 VWFIGLQFDENV-----KNLDLTKDIQQFKRNI 461
>gi|358059327|dbj|GAA94903.1| hypothetical protein E5Q_01558 [Mixia osmundae IAM 14324]
Length = 618
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/521 (41%), Positives = 302/521 (57%), Gaps = 41/521 (7%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S LG+T P++ P L T L +R NL+E+ RE VLGRLD +VK
Sbjct: 2 SEPHYLGVTRPVTTDPPKPHSLRMTESLMAEMRARNLFETDAGERRRESVLGRLDGMVKE 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V++ + +G + + EA KIFTFGSYRLGVHGPGADIDTLCV P + R DFF
Sbjct: 62 FVRRACQLRGRSQSEIDEAGGKIFTFGSYRLGVHGPGADIDTLCVVPVYVERA-DFFTIF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
ML E +V ++ +P+A+VP++K KF+ V IDL +AR++ +P+DL++ D++L+
Sbjct: 121 LDMLRERDDVRDITDIPEAYVPLIKVKFTNVEIDLTFARINRPTVPDDLELGDDNLLKQL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ VRSLNG RVTDQILRLVP I FR +LR +++WAKRR VY+NV GF GG++WA+LV
Sbjct: 181 DERDVRSLNGSRVTDQILRLVPNIPVFRDSLRAIKYWAKRRAVYANVVGFPGGVSWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPN P ++SRFF ++ W+WP PVLL +++G L ++VW+P N D+ H M
Sbjct: 241 ARICQLYPNECPGGILSRFFHIFLLWQWPEPVLLTPLKQGPLNVRVWNPHVNSADRMHKM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M S++N+S S++ ++ E++RG I + + W LFEP FF Y
Sbjct: 301 PVITPAYPSMCSTHNISHSSMAVIKAEWERGENIVNRIAVGQT--TWAELFEPTDFFYKY 358
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE-------RHTY-----NMLQCHPHP 411
+ YL+I S+++ D+ W G VES+LR L +E H Y C
Sbjct: 359 RYYLQITASSQDMDNQLKWSGTVESKLRTLGANLEGAEGVTLAHIYVDEFEKTYSCKTEE 418
Query: 412 ----------------------GDFSDKSKPLYCSYFMGLQRKQGVPVGEG-EQFDIRLT 448
D K ++++GL G P G G ++ D+
Sbjct: 419 EVKLVASGASTPEISARTEDDIKDVEGAVKLHTSNFYIGLSIDLG-PKGSGSKKLDLSYP 477
Query: 449 VKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 489
EF + V + P M I+V ++ LP+FVF G RP
Sbjct: 478 TCEFTKLVKRWEKYTPEMGITVRYMKNIALPDFVF--GDRP 516
>gi|308478522|ref|XP_003101472.1| CRE-PAP-1 protein [Caenorhabditis remanei]
gi|308263118|gb|EFP07071.1| CRE-PAP-1 protein [Caenorhabditis remanei]
Length = 639
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/470 (44%), Positives = 296/470 (62%), Gaps = 36/470 (7%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK-- 66
LG+++PISLA P D++ T +L + L+ N YE + E R EVL L+++VK WVK
Sbjct: 10 LGVSQPISLAHPDAKDILLTEQLVETLKKCNSYEPKAETEKRMEVLRSLNRLVKEWVKNV 69
Query: 67 ---KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
KI +G N A K+FTFGSYRLGVH GADIDTL V PRH R DFF
Sbjct: 70 TAIKIPSGEGAN------AGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRT-DFFTSF 122
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+ML++ P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P+ ++S DS+L+N
Sbjct: 123 KEMLSQDPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDSLLKNL 182
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D+++VRSLNGCRV +Q+L+LVP+ N+ LR ++ WAK G+YSN GF GGI+WA+L+
Sbjct: 183 DQESVRSLNGCRVAEQLLKLVPRQNNYCVALRAIKLWAKNHGIYSNSMGFFGGISWAILI 242
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-----EEGSLGLQVWDPRRNPKD 298
AR CQLYPNA PS LV R F ++ W WP+PVLL + + G+L VWDPRR D
Sbjct: 243 ARACQLYPNASPSRLVHRMFFIFATWTWPHPVLLNELNSERTDVGALIDLVWDPRRKSTD 302
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
++HLMPIITPA+P NS++NV+ ST++++ E G EIC + +E WD LF+
Sbjct: 303 RFHLMPIITPAFPQQNSTHNVTRSTMQVIRTEICEGLEICRDI--SEGKCGWDALFKEVN 360
Query: 359 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG------ 412
FF YK+Y+ + ++A N ++ N+ G++ESR+R L +ER+ +++ H P
Sbjct: 361 FFSRYKHYIALLMAAPNEEEELNYGGFLESRIRLLVQSLERNQ-DIVIAHNDPNKHKPSP 419
Query: 413 ----DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 458
D S ++K + +F+GL+ V + D+ + FK V +
Sbjct: 420 NAKFDVSPENKRITL-WFIGLEF-----VEHTKSLDLTSEIHRFKTNVEL 463
>gi|239835858|gb|ACS29269.1| pap1 [Meyerozyma guilliermondii]
Length = 564
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/408 (46%), Positives = 276/408 (67%), Gaps = 5/408 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS A PT + L L+ +ES++ R E+L L ++V+ +V +S
Sbjct: 7 GVTAPISTANPTPKENALNDSLIAELKARGSFESEQATRKRVEILALLQKMVQEFVYTVS 66
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ K ++D + ++A KIFTFGSYRLGV+GPG+DIDTL V P+H RE DFF QM+ +
Sbjct: 67 KKKNMSDGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLIVVPKHVVRE-DFFTIFDQMIRQ 125
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
PE+ E+ VPDA VP++ +FSG+SIDL++ARL++ +P D+ + +++L+N DE +R
Sbjct: 126 RPELEEITAVPDAFVPIIMIEFSGISIDLIFARLNVSRVPLDMTLEDNNLLKNIDENDMR 185
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
+LNG RVTDQIL+LVPK+ F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQL
Sbjct: 186 ALNGTRVTDQILQLVPKVTVFKHALRCIKLWAQQRAVYGNMFGFPGGVAWAMLVARICQL 245
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV +++V +FF +YT+W WP PVLL IE+G L ++VW+PR P D+ H MP+ITPA
Sbjct: 246 YPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHKMPVITPA 305
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP M +++N+++ST +++M+E +RG E+ + N W LF+ FF YK YL I
Sbjct: 306 YPSMCATHNINSSTQKVIMNELERGSELMAQISLNNK--TWADLFQRHDFFHRYKFYLCI 363
Query: 370 DISAENADDLRN-WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
+ E ++ + W G VES+LR L K+E T + HP+ DFSD
Sbjct: 364 IAATEGTNEEHSKWSGMVESKLRILIQKLEL-TDGIALAHPYVKDFSD 410
>gi|209878111|ref|XP_002140497.1| poly(A) polymerase protein [Cryptosporidium muris RN66]
gi|209556103|gb|EEA06148.1| poly(A) polymerase protein, putative [Cryptosporidium muris RN66]
Length = 647
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/511 (40%), Positives = 312/511 (61%), Gaps = 27/511 (5%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ G+T PIS + PT D T +L +R NLYE+ E RE++L L+++V+ W+
Sbjct: 22 KQWGVTPPISESLPTPQDYKLTEQLIIAMRSENLYETVEGMKKREQILASLNKMVREWIY 81
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+ S ++++ A I+TFGSYRLGV G+DIDTLC+ PRH TR+ FF
Sbjct: 82 EASLEHSMSEEESLTAGGGIYTFGSYRLGVVAAGSDIDTLCIVPRHITRD-SFFTFFLAK 140
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + +T++ PVPDA+ P++K + G+ +DLL+A L+L IP DL+ D +L+N DE+
Sbjct: 141 LQQDIHITKIQPVPDAYTPIIKMVYYGIEMDLLFACLNLSRIPSDLNTLDDDLLRNVDEK 200
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
T RSLNGCRV D IL+LVP ++FRT LR ++ W+K RG+YSNV G+LGGI+WA+L ARI
Sbjct: 201 TARSLNGCRVNDMILQLVPNKESFRTALRFVKHWSKSRGIYSNVLGYLGGISWAILTARI 260
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE------GSLGLQVWDPRRNPKDKY 300
CQLYPN+ P+ +++RFF VY W+W NPV+LC I+E G +G +VW+P NP+D+
Sbjct: 261 CQLYPNSAPNQIINRFFYVYKAWQWKNPVILCEIKEVPKNSPGLMGFRVWNPNTNPQDRA 320
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPA+P MNS++NV+ +TLR++ +E QRG E+ + +E A W L+ P+ FF
Sbjct: 321 HLMPIITPAFPSMNSTHNVTQTTLRVITEELQRGSELVKEIENERA--QWSDLWSPYMFF 378
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--SDKS 418
E +K+++++ + A + + W GW+ES++R L K+E T+ LQ P P SD
Sbjct: 379 ENHKHFIQVKMLANSEQAFQKWTGWIESKIRFLVRKLE--TFKGLQVRPWPKVIQESDNQ 436
Query: 419 KPLY----CSYFMGLQ------RKQGVPVGEGEQFDIRLTVKEFKQAVSMYT---LRKPG 465
K + C Y +GL G G D+R + +F + + + K
Sbjct: 437 KDGFQFAQCMY-IGLVLCTTSGNNNGKSTGITPVVDLRGAILDFVGFIMNWNEVEIYKDS 495
Query: 466 MQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 496
+ + V H+ ++LP + SKGT
Sbjct: 496 IDLKVKHLRFKDLPKVLREQNNTKVLNSKGT 526
>gi|66357032|ref|XP_625694.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
gi|46226666|gb|EAK87645.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
Length = 699
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/411 (46%), Positives = 273/411 (66%), Gaps = 11/411 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ G+T PIS A T D T L +R NLYES E RE VL L+++V+ W+
Sbjct: 18 KQYGVTPPISEAMATPQDYKLTENLIIAMRQENLYESVEGMKKREYVLASLNKLVREWIY 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+ S +N++ A IFTFGSYRLGV G+DIDTLC+ PRH +RE FF
Sbjct: 78 EASLEHSMNEEEALSAGGGIFTFGSYRLGVVAAGSDIDTLCIAPRHISRES-FFSFFLAK 136
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + VT++ PVPDA+ P++K + G+ +DLL+A L+L IP DL+ D +L+N D++
Sbjct: 137 LQQDINVTKVQPVPDAYTPIIKMVYHGMEMDLLFACLNLSRIPNDLNTLDDDLLKNVDDK 196
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
T RSLNGCRV D IL+LVP ++FRT LR ++ W+K RG+YSNV G+LGGI+WA+L ARI
Sbjct: 197 TARSLNGCRVNDMILQLVPNKESFRTALRFVKHWSKARGIYSNVLGYLGGISWAILTARI 256
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE------GSLGLQVWDPRRNPKDKY 300
CQLYPNA PS +++RFF +Y W+W NPV+LC I+E G +G +VW+P NP+D+
Sbjct: 257 CQLYPNAAPSQIINRFFYIYKTWQWKNPVILCEIKEVPKNTPGLMGFRVWNPNLNPQDRA 316
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H+MPIITPA+P MNS++NV+ +TL ++ DE QR + I + +E ++A W ++ PF FF
Sbjct: 317 HVMPIITPAFPSMNSTHNVTHTTLGVITDELQRAYRIIQDIENDKA--TWHDVWSPFLFF 374
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 411
E +K+++++ + + N W GW+ES+LR L K+E T+ LQ P P
Sbjct: 375 EKHKHFIQVKMLSNNEQAFHKWIGWIESKLRFLVRKLE--TFKGLQVRPWP 423
>gi|156082541|ref|XP_001608755.1| poly(A) polymerase PAP [Babesia bovis T2Bo]
gi|154796004|gb|EDO05187.1| poly(A) polymerase PAP, putative [Babesia bovis]
Length = 512
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/499 (39%), Positives = 309/499 (61%), Gaps = 17/499 (3%)
Query: 2 GSSNG-QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
G+++G R GIT+P+S GP++ D T +L K+L NL+E+++ RE VL L+++
Sbjct: 5 GTNDGFTRYGITDPVSTDGPSESDREDTAELMKFLVAQNLFETEDGKRKRERVLESLNRV 64
Query: 61 VKIWVKKIS-RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF 119
++ +V+K + + G+ D + +AK+ TFGSYRLG+ P +DID LC+ P+ TRE F
Sbjct: 65 LQQFVRKNAIKQLGIPDDEASKISAKLLTFGSYRLGIVAPNSDIDCLCLCPQSVTRES-F 123
Query: 120 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 179
F + + L +P +T+LH VPDA+ PV+K + G+ IDLL+A L +PE++D+ D+I
Sbjct: 124 FTDFYNALKLLPNITKLHAVPDAYTPVIKLIYDGIDIDLLFANLPAQTVPEEIDVLDDAI 183
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+N +E T RS+NGCRV IL VP NFRTTLR ++ WA RRG+Y+ V ++GG+ W
Sbjct: 184 LRNMNEATARSINGCRVAALILASVPNKDNFRTTLRYVKLWANRRGLYTTVMAYMGGVAW 243
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRR 294
A+L AR+CQLYPN +P+ L+ +FFRVY QW W PV+LC I+E G + +VWDPR
Sbjct: 244 AILTARVCQLYPNFLPNQLIQKFFRVYAQWNWKCPVMLCKIKEVPNIPGYMSFKVWDPRN 303
Query: 295 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN-EADVDWDTL 353
NP D+ HLMP+ITPA+P MNS++N++ +T RI+ DEF+R +++ + K + W+ +
Sbjct: 304 NPTDRQHLMPVITPAFPSMNSTHNITLTTKRILTDEFKRANDLLKVNAKGAQMKNIWERV 363
Query: 354 FEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 413
E F ++K++L I++ A W+GW+ SR+R L KIE +++ P
Sbjct: 364 LEKEDMFASHKHFLVIEVLATTEHVHGKWEGWIGSRMRFLIKKIETVPNILVRPWPEFFK 423
Query: 414 FSDKSKPLYCSYFMGLQRKQ-----GVPVGEGEQFDIRLTVKEFKQAVSMYT---LRKPG 465
+ K F G + K+ + FD+R+++K FK+ ++ +T K
Sbjct: 424 YEHKEWDYASCVFFGFKCKEPDNKTNSAEPANKTFDMRMSIKGFKEIINSWTEMEAYKDQ 483
Query: 466 MQISVAHVTRRNLPNFVFP 484
+ +++ ++ LP+FV P
Sbjct: 484 IAVNIRYLKNSQLPHFVNP 502
>gi|156405096|ref|XP_001640568.1| predicted protein [Nematostella vectensis]
gi|156227703|gb|EDO48505.1| predicted protein [Nematostella vectensis]
Length = 486
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/474 (45%), Positives = 301/474 (63%), Gaps = 12/474 (2%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
GS+ Q+ G+T IS AGP DL T++LE+ L ++ES++E R VL +L+++
Sbjct: 8 GSNPPQKSFGVTSAISHAGPKPRDLELTKRLEEALIPYGVFESEDELQQRMIVLAKLNEL 67
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK W+ ++S K + + + + KIFTFGS+RLGVH GADIDTL V PRH R DFF
Sbjct: 68 VKEWIVEVSIKKNMPENVAKTVGGKIFTFGSFRLGVHTKGADIDTLLVAPRHIDRA-DFF 126
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
+ +L P+V EL V +A VPV+K F + +DLL+ARL+ IP++LD+ +++L
Sbjct: 127 SSFYDLLKNHPDVRELRAVENAFVPVIKLIFCDIEVDLLFARLASPEIPDNLDLLDENLL 186
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N D + VRSLNGCRVTD+ILR VP I++FR TLR ++ WAK+ GVYSNV GFLGG++WA
Sbjct: 187 KNLDPKCVRSLNGCRVTDEILRQVPNIESFRLTLRAVKLWAKKHGVYSNVLGFLGGVSWA 246
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI---EEGSLGLQVWDPRRNPK 297
+LVAR CQLYPNA S L+ +FF V+++W WPNPVLL I E LG Q+WDPR NP
Sbjct: 247 ILVARTCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFQIWDPRTNPG 306
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D+YHLMPIITPAYP N S++VS ST +IM DEF + E + +A +WD LF P
Sbjct: 307 DRYHLMPIITPAYPQQNFSFSVSMSTRKIMCDEFFIRLKNTEDVISGKA--NWDILFTPP 364
Query: 358 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP---GDF 414
FF YK+Y+ + S+ ++ W G VES++R L +E + Y L H +P G
Sbjct: 365 NFFHKYKHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSYGPL 423
Query: 415 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRL-TVKEFKQAVSMYTLRKPGMQ 467
+ + +F+GL ++ V ++I++ K QAV + L+K +Q
Sbjct: 424 DSEGEKHVTRWFIGLMCEKLENVNINLTYEIQMFENKVHTQAVKIMMLKKEWLQ 477
>gi|213406289|ref|XP_002173916.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
gi|212001963|gb|EEB07623.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
Length = 563
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/572 (37%), Positives = 330/572 (57%), Gaps = 70/572 (12%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWV 65
++ GIT PIS A PT+ + L L+ NL+ES +++ R VL L I +V
Sbjct: 3 SKQWGITPPISTAPPTEKENALNTALVNELKAQNLFESAQDSEKRVRVLQELQAITTEFV 62
Query: 66 KKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
+K+S +K +++++ E+ KIFT+GSYRLGV+GPG+DIDTL V P+H +RE +FF +L
Sbjct: 63 RKVSLSKHMSEKMASESGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSRE-NFFQDLEP 121
Query: 126 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 185
ML PE+T+L VP+A+VP++KFKF G+SIDL++ARLS+ +P DL++S ++L+ +E
Sbjct: 122 MLRARPEITDLAAVPEAYVPIIKFKFLGISIDLIFARLSIPRVPLDLELSDSNLLKGVEE 181
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
+ + SLNG RVTDQIL+LVP F+ LR ++FWA+RR +Y+NV GF GG+ WA++VAR
Sbjct: 182 RCILSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVAR 241
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 305
ICQLYPNAV +++VS+FFR+ +QW WP PVLL I++G L ++VW+P+ P DK H MPI
Sbjct: 242 ICQLYPNAVSAVIVSKFFRILSQWNWPQPVLLKPIDDGPLQVRVWNPKLYPSDKAHRMPI 301
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
ITPAYP M +++N++ ST +++ E R I + + + W LFE FF Y+
Sbjct: 302 ITPAYPSMCATHNITPSTQTVILREMARAGLIVDDIMAGKK--PWSALFEKHDFFHRYRY 359
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIE-------RHTYN-----MLQCHPH--- 410
YL + +++ AD W G VES+LR ++E H +N + C
Sbjct: 360 YLTVTAASKTADSQLKWSGLVESKLRHFVTRLELVDAITLAHPFNKGFNKIYMCKTEEEA 419
Query: 411 ---------------------------------PGDFSDKSK-PLY-CSYFMGL--QRKQ 433
GD +D+ K +Y ++++GL +RK+
Sbjct: 420 QQVANGVSTAVVAKDANLEEAAKAGDQNEHKEGEGDAADEKKFSVYTTTFYIGLEIERKK 479
Query: 434 GVPVGEGEQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVF-PGGVRPSR 491
G + ++ DI +EF + + M + + + LP+ VF PG RP
Sbjct: 480 G---PQSKRLDITWPSQEFSEMCKKWDKFDDTMMTVFIKNTRNYTLPDEVFEPGEERPKP 536
Query: 492 PSKGTWDSRRALERKVSSHTKPGADDGRKRKQ 523
P+K ++++S K +D ++Q
Sbjct: 537 PTK----------KRIASAEKKTENDQVPKRQ 558
>gi|405117907|gb|AFR92682.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 644
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/521 (41%), Positives = 303/521 (58%), Gaps = 42/521 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PI+ P +D+ + L L +N +ES +E RE +L + Q+V +V +
Sbjct: 10 LGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLVAKFVHDV 69
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S G+++++ EA +I+T GSYRLGVHGPG+DIDT+CV PRH RE FFGE ML
Sbjct: 70 SIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREH-FFGEFQDMLR 128
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
P VTE+ V A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+ +
Sbjct: 129 AWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDDASQ 188
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNG RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL ARICQ
Sbjct: 189 RSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQ 248
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPII 306
LYP A P+ ++ +FF +Y QW WP PVLL I+ G +Q VW+P+ + +D+ H MP+I
Sbjct: 249 LYPAAAPATIIGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVI 308
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP M S++N+++ST+ I+ E R +I + + K D W LFE FF YK Y
Sbjct: 309 TPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKT-PDSSWIPLFEKVDFFSMYKTY 367
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG-------------- 412
+++ SA +D +++W G VESR+R L +E +T ++ HP G
Sbjct: 368 VQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRLFYCLTEEEQ 426
Query: 413 ------------------DFSDKS-KPLYC-SYFMGLQRKQGVPVGEGEQFDIRLTVKEF 452
D DK + +Y S+F+GL+ ++ G ++ K+F
Sbjct: 427 AAASQGELTAEMIDRTEEDVKDKEHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPSKKF 486
Query: 453 KQAVSMYTLRKPGMQISVA--HVTRRNLPNFVFPGGVRPSR 491
AV + M++SV R LP++VFP G+ S+
Sbjct: 487 -CAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSK 526
>gi|365991615|ref|XP_003672636.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
gi|343771412|emb|CCD27393.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/396 (47%), Positives = 277/396 (69%), Gaps = 5/396 (1%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
N Q++ GIT P+S+A T + +L + L+ N +E+++E +R +VL L ++ +
Sbjct: 2 NYQKVYGITGPVSIAQSTAAENKLNDELVQELKKENSFETEQETANRVKVLEILQKLTEN 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V K+S+ K ++D + +++ K+FTFGSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVFKVSKNKNMSDGMAKDSGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E PE+ E+ PVPDA VPV+K KFSG+SIDLL ARL + +P +L +S ++L+N
Sbjct: 121 DSLLRERPELEEIAPVPDAFVPVIKVKFSGISIDLLCARLDIAQVPLNLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR TLR ++ WA+RR +Y+NV GF GG+ WA+LV
Sbjct: 181 DEKELRALNGTRVTDEILELVPKPNVFRITLRAIKLWAQRRAIYANVFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF+++++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVVLNRFFKIFSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST I++ EF RG ++ + N+ +W LF+ TFF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKTIILKEFARGVQVTNDIFSNKG--NWGDLFKKHTFFYEY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL I S D+ W G VES+LR L LK+E
Sbjct: 359 KFYLTITASTRGTDEEHLKWSGLVESKLRLLILKLE 394
>gi|348554483|ref|XP_003463055.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Cavia porcellus]
Length = 741
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/498 (44%), Positives = 309/498 (62%), Gaps = 32/498 (6%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W++
Sbjct: 18 KHYGITSPISLAAPKETDWVLTQKLIETLKPFGVFEEEEEPQRRILILGKLNNLVKEWIR 77
Query: 67 KISRAKGLNDQLLQEANAKIFTFG--SYRLGV---HGPGADIDTLCVGPRHATREEDFFG 121
+IS +K + + ++ FT+G YR+G + GADID LCV PRH R DFF
Sbjct: 78 EISESKVSPESVFLDSG---FTWGPCKYRIGXWDYYFLGADIDALCVAPRHVDRS-DFFT 133
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
+ L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+
Sbjct: 134 SFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLK 193
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+
Sbjct: 194 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 253
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YH
Sbjct: 254 LVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYH 313
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+
Sbjct: 314 LMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQ 371
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSD 416
YK+Y+ + SA W G VES++R L +E++ + L Q P P + D
Sbjct: 372 KYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD 431
Query: 417 KSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQIS 469
K + + +GL K+ E D+ ++ F +QA++ M+ + M+I+
Sbjct: 432 KEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIA 486
Query: 470 VAHVTRRN----LPNFVF 483
HV R+ LPN V
Sbjct: 487 AMHVKRKQLHQLLPNHVL 504
>gi|221486493|gb|EEE24754.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
Length = 795
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/504 (42%), Positives = 305/504 (60%), Gaps = 37/504 (7%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
G+T P+++ P + DL R+ +L LR +NLYE+ + RE VL L++IV WV ++
Sbjct: 213 FGVTNPVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWVVEV 272
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+GL++Q ++A KIFTFGSYRLGV PG+DIDTLCV PRH +R+ FF L+ L
Sbjct: 273 GMEQGLDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDA-FFKILYAKLQ 331
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQT 187
+ V++L PVPDA+ PV+KF F GV IDLL+ARL L VIP + + D +L++ DE+T
Sbjct: 332 QDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKT 391
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
RS+NG RV D IL+LVP + F+ TLR ++ WAK RG+YSNV G+LGG++WA+LVAR C
Sbjct: 392 ARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCC 451
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEE----GSLGLQVWDPRRNPKDKYHL 302
QLYPN PS LV RFF VY+ W W N PVLLC I+E G +VW+P+ N +D++HL
Sbjct: 452 QLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHL 511
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW----DTLFEPFT 358
+PIITPA+P MNS++NVS ST R++ +EF I + +K + ++ W + +P
Sbjct: 512 LPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKK-EISWTEALHLVLKPLD 570
Query: 359 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT----YNM---------- 404
F ++K++L + + A+N R W GWVES++R L ++ER +N
Sbjct: 571 -FTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAA 629
Query: 405 LQCHPHPGDFSDKSKPLYC--SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR 462
+ P P FS + C S + L Q V D+R EF ++ + R
Sbjct: 630 MTVRPIPCTFSFQEPGWECASSMLVALNFAQQPCV-----IDLRPAAGEFVDLINQWPER 684
Query: 463 KP---GMQISVAHVTRRNLPNFVF 483
+Q+ V H+ R LP +V
Sbjct: 685 AQLDGQIQLRVKHLRRSQLPAYVL 708
>gi|221508263|gb|EEE33850.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
Length = 778
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/504 (42%), Positives = 305/504 (60%), Gaps = 37/504 (7%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
G+T P+++ P + DL R+ +L LR +NLYE+ + RE VL L++IV WV ++
Sbjct: 194 FGVTNPVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWVVEV 253
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+GL++Q ++A KIFTFGSYRLGV PG+DIDTLCV PRH +R+ FF L+ L
Sbjct: 254 GMEQGLDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDA-FFKILYAKLQ 312
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQT 187
+ V++L PVPDA+ PV+KF F GV IDLL+ARL L VIP + + D +L++ DE+T
Sbjct: 313 QDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKT 372
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
RS+NG RV D IL+LVP + F+ TLR ++ WAK RG+YSNV G+LGG++WA+LVAR C
Sbjct: 373 ARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCC 432
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEE----GSLGLQVWDPRRNPKDKYHL 302
QLYPN PS LV RFF VY+ W W N PVLLC I+E G +VW+P+ N +D++HL
Sbjct: 433 QLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHL 492
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW----DTLFEPFT 358
+PIITPA+P MNS++NVS ST R++ +EF I + +K + ++ W + +P
Sbjct: 493 LPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKK-EISWTEALHLVLKPLD 551
Query: 359 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT----YNM---------- 404
F ++K++L + + A+N R W GWVES++R L ++ER +N
Sbjct: 552 -FTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAA 610
Query: 405 LQCHPHPGDFSDKSKPLYC--SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR 462
+ P P FS + C S + L Q V D+R EF ++ + R
Sbjct: 611 MTVRPIPCTFSFQEPGWECASSMLVALNFAQQPCV-----IDLRPAAGEFVDLINQWPER 665
Query: 463 KP---GMQISVAHVTRRNLPNFVF 483
+Q+ V H+ R LP +V
Sbjct: 666 AQLDGQIQLRVKHLRRSQLPAYVL 689
>gi|237833947|ref|XP_002366271.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
gi|211963935|gb|EEA99130.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
Length = 811
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/504 (42%), Positives = 305/504 (60%), Gaps = 37/504 (7%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
G+T P+++ P + DL R+ +L LR +NLYE+ + RE VL L++IV WV ++
Sbjct: 224 FGVTNPVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWVVEV 283
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+GL++Q ++A KIFTFGSYRLGV PG+DIDTLCV PRH +R+ FF L+ L
Sbjct: 284 GMEQGLDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDA-FFKILYAKLQ 342
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQT 187
+ V++L PVPDA+ PV+KF F GV IDLL+ARL L VIP + + D +L++ DE+T
Sbjct: 343 QDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKT 402
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
RS+NG RV D IL+LVP + F+ TLR ++ WAK RG+YSNV G+LGG++WA+LVAR C
Sbjct: 403 ARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCC 462
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEE----GSLGLQVWDPRRNPKDKYHL 302
QLYPN PS LV RFF VY+ W W N PVLLC I+E G +VW+P+ N +D++HL
Sbjct: 463 QLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHL 522
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW----DTLFEPFT 358
+PIITPA+P MNS++NVS ST R++ +EF I + +K + ++ W + +P
Sbjct: 523 LPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKK-EISWTEALHLVLKPLD 581
Query: 359 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT----YNM---------- 404
F ++K++L + + A+N R W GWVES++R L ++ER +N
Sbjct: 582 -FTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAA 640
Query: 405 LQCHPHPGDFSDKSKPLYC--SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR 462
+ P P FS + C S + L Q V D+R EF ++ + R
Sbjct: 641 MTVRPIPCTFSFQEPGWECASSMLVALNFAQQPCV-----IDLRPAAGEFVDLINQWPER 695
Query: 463 KP---GMQISVAHVTRRNLPNFVF 483
+Q+ V H+ R LP +V
Sbjct: 696 AQLDGQIQLRVKHLRRSQLPAYVL 719
>gi|341899657|gb|EGT55592.1| hypothetical protein CAEBREN_22785 [Caenorhabditis brenneri]
Length = 630
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/496 (41%), Positives = 302/496 (60%), Gaps = 42/496 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+++PIS+A P DL T +L + L++ YE +EE R EVL L+++VK WVK +
Sbjct: 12 LGVSQPISVAYPDAKDLALTEQLIETLKEFKSYEPKEETDKRLEVLRALNRLVKEWVKNV 71
Query: 69 SRAK-----GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+ K G N A K+FTFGSYRLGVH GADIDTL V PRH R DFF
Sbjct: 72 TAIKIPSGDGAN------AGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSF 124
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+ML + P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P++ ++S D +L+N
Sbjct: 125 KEMLNQDPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALREVPDNQELSDDQLLRNL 184
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D +++RSLNGCRV +Q+L+LVP+ + F T LR ++ WAK G+YSN GF GGI+WA+L+
Sbjct: 185 DAESIRSLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAILI 244
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKD 298
AR CQLYPNA PS LV R F +++ W WP+PVLL + +L VWDP + D
Sbjct: 245 ARACQLYPNASPSKLVHRMFFIFSTWTWPHPVLLKFAAKDRNDIPALCKLVWDPEKKSSD 304
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
K+HLMPIITPA+P NS++NV+ S+ +I+ DE EICE + N+ W LFE
Sbjct: 305 KFHLMPIITPAFPEQNSTHNVTRSSSQIIKDEIWEALEICEQI--NDGKAKWKDLFEEVN 362
Query: 359 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG------ 412
FF YK+++ + ++A N ++ ++ G++ESR+R L +ER+ +++ H P
Sbjct: 363 FFSRYKHFIALIMAAPNEEEELSYGGFLESRIRLLVQSLERNP-DIILAHNDPNKHKPSK 421
Query: 413 ----DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM-- 466
D S ++K + +F+GL+ + D+ ++ FK + G+
Sbjct: 422 NAKFDVSPENKRITV-WFIGLEFSE-----HATSLDLTNEIQRFKTNFELQASSVKGIGP 475
Query: 467 ----QISVAHVTRRNL 478
+I + HV +RNL
Sbjct: 476 TCQVEIDMFHVKQRNL 491
>gi|320165027|gb|EFW41926.1| poly(A) polymerase [Capsaspora owczarzaki ATCC 30864]
Length = 698
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/562 (41%), Positives = 317/562 (56%), Gaps = 86/562 (15%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSRE------------------ 51
G+T P+ +A P+ D+ +R+LE+ LRD +L+E++EEA +R+
Sbjct: 10 GMTPPLLIADPSPRDVELSRQLEQTLRDHDLFETEEEAQTRQLLLCSSDLIDLFSLTVAL 69
Query: 52 ------------------------------EVLGRLDQIVKIWVKKISRAKGLNDQLLQ- 80
VL RLD IVK WV ++ AK N+
Sbjct: 70 GRSTFVALPSSSPVPPPPPPSPLLPMLHSHMVLARLDSIVKQWVIQVLTAK--NEMPPDT 127
Query: 81 EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVP 140
E K+FTFGSYRLGVHG GADIDTLC+ PR TR+ DFF L ++L E E +EL PV
Sbjct: 128 EPGGKVFTFGSYRLGVHGRGADIDTLCIAPRGVTRD-DFFQSLVELLREQSETSELTPVT 186
Query: 141 DAHVPVMKFKFSGV-----------SIDLLYARL-SLWVIPEDLDISQDSILQNADEQTV 188
A P++ KFSGV IDLL+A L + + E+L++ ++IL+N D TV
Sbjct: 187 GAFTPIITLKFSGVDNRSLASSAPLKIDLLFAELPGVLSVSENLNVMDNAILRNCDMATV 246
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RS+NG RV + IL+LVP NFR LR ++ WA RGVYSN GFLGGI WA+LVAR CQ
Sbjct: 247 RSVNGSRVANYILQLVPDRDNFRMALRAIKLWANNRGVYSNKLGFLGGIAWAILVARTCQ 306
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKDKYHLMPIIT 307
LYP + S +V+RFFRV+ W WP PV L A+EE SL L W+P N D HLMPIIT
Sbjct: 307 LYPKSSASTIVARFFRVFHNWSWPTPVWLKAMEEDRSLALPNWNPVINASDARHLMPIIT 366
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
PAYP MNS++NVS STLR+M +EF RG ++ +E + V W LFE FF YK Y+
Sbjct: 367 PAYPSMNSTHNVSMSTLRVMTEEFARGMQVTLDIEVGK--VGWPVLFEKNNFFTRYKTYI 424
Query: 368 RIDI-SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-----DKSKPL 421
+I + EN D+ R W+G+VES+LR +E + HP+P FS + +P+
Sbjct: 425 QISARTEENQDEHRQWEGFVESKLRMFLQWLE-SAPGVDYVHPYPKTFSQTDTTESGQPV 483
Query: 422 YCSYF---MGLQRKQGVPVGEGEQFDIRLTVKEFKQAV---SMYTLRKPGMQISVAHVTR 475
Y + F M ++++G + ++ V++F++A+ + + P + + V + R
Sbjct: 484 YLTIFYFGMMFKKQEGT---DPRVIELGNIVRDFREAIKNQNASFVNNPRVDLVVLPMKR 540
Query: 476 RNLPNFVFPGGVRPS---RPSK 494
LP VF GGVRP+ RP K
Sbjct: 541 PQLPENVFEGGVRPAPTKRPKK 562
>gi|255732153|ref|XP_002551000.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
gi|240131286|gb|EER30846.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
Length = 558
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/410 (45%), Positives = 281/410 (68%), Gaps = 5/410 (1%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ G+T+PIS A PT + L + L++ +ES++ R EVL ++V+ +V
Sbjct: 5 RKYGVTDPISTANPTVKENALNDSLIQELKNRGSFESEQATKKRVEVLTLFQKLVQEFVY 64
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S++K ++D + +++ K+FTFGSYRLGV+GPG+DIDTL V P+H TR+ DFF +
Sbjct: 65 TVSKSKNMSDGMAKDSGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFPDI 123
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
+ + PE+ E+ VPDA VP++K +F G+SIDL+ ARL++ +P ++ + ++L+N DE+
Sbjct: 124 IRKRPELEEIACVPDAFVPIIKLEFDGISIDLIMARLNVPRVPLEMTLDDKNLLKNLDEK 183
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY NV GF GG+ WA+LVARI
Sbjct: 184 DLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVYGFPGGVAWAMLVARI 243
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV +++V +FF +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP+I
Sbjct: 244 CQLYPNAVSAVIVEKFFSIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVI 303
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP M +++N+++ST ++++ E RG I + N + W LF+ +F AYK Y
Sbjct: 304 TPAYPSMCATHNITSSTQKVILKELSRGSSIMNDI--NTGNKTWSDLFKRHEYFHAYKFY 361
Query: 367 L-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
L + + + ++ + W G+VESRLRQL LK+E T + HP+ DFS
Sbjct: 362 LCVVAATVDTSEQHKKWSGFVESRLRQLVLKLEV-TDGIEFAHPYVKDFS 410
>gi|58258863|ref|XP_566844.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222981|gb|AAW41025.1| polynucleotide adenylyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 642
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/524 (40%), Positives = 301/524 (57%), Gaps = 48/524 (9%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PI+ P +D+ + L L +N +ES +E RE +L + Q+V +V +
Sbjct: 10 LGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLVAKFVHDV 69
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S G+++++ EA +I+T GSYRLGVHGPG+DIDT+CV PRH RE FFGE ML
Sbjct: 70 SIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREH-FFGEFQDMLR 128
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
P VTE+ V A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+ +
Sbjct: 129 AWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDDASQ 188
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNG RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL ARICQ
Sbjct: 189 RSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQ 248
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPII 306
LYP A P+ +V +FF +Y QW WP PVLL I+ G +Q VW+P+ + +D+ H MP+I
Sbjct: 249 LYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVI 308
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP M S++N+++ST+ I+ E R +I + + K D W LFE FF YK Y
Sbjct: 309 TPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKT-PDSSWIPLFEKVDFFSMYKTY 367
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC--- 423
+++ SA +D +++W G VESR+R L +E +T ++ HP G ++ YC
Sbjct: 368 VQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---NRVFYCLTE 423
Query: 424 ----------------------------------SYFMGLQRKQGVPVGEGEQFDIRLTV 449
S+F+GL+ ++ G ++
Sbjct: 424 EEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPS 483
Query: 450 KEFKQAVSMYTLRKPGMQISVA--HVTRRNLPNFVFPGGVRPSR 491
K+F AV + M++SV R LP++VFP G+ S+
Sbjct: 484 KKF-CAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSK 526
>gi|260941482|ref|XP_002614907.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
gi|238851330|gb|EEQ40794.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
Length = 557
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/409 (46%), Positives = 276/409 (67%), Gaps = 7/409 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T P+SLA PT +++ L L+ +ES++ R EVL +V+ +V +S
Sbjct: 7 GVTGPVSLANPTPNEIKLNDLLISELKARGSFESEQATKKRVEVLTLFQNMVQEFVYTVS 66
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ K ++D + ++A K+FTFGSYRLGV+GPG+DIDTL V P+H RE DFF Q++ +
Sbjct: 67 KNKNMSDGMARDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVGRE-DFFTVFEQIIRK 125
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
PE+ E+ VPDA VP++K +F G+SIDL+Y+RL++ +P D+ + ++L+N DE+ +R
Sbjct: 126 RPELEEITSVPDAFVPIIKIEFDGISIDLIYSRLNVPRVPLDMTLEDKNLLKNIDEKDLR 185
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RVTD+IL+LVPK F+ LRC++ WA++R VY NV GF GG+ WA+L ARICQL
Sbjct: 186 SLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNVFGFPGGVAWAMLTARICQL 245
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV + +V +FF +YT+W WP PVLL IE+G L ++VW+PR P D+ H MP+ITPA
Sbjct: 246 YPNAVGATIVEKFFTIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHRMPVITPA 305
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP M +++N+++ST +++M E +RG EI + E W LFE +FF YK YL I
Sbjct: 306 YPSMCATHNITSSTQKVIMKELERGAEIMSLVASGEK--TWADLFERHSFFHDYKFYLCI 363
Query: 370 DISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
++A ADD + W G +ES+LR L K+E T + HP+ DFS+
Sbjct: 364 -VAATLADDEEHHKWSGMIESKLRILVQKLEV-TDGIALAHPYVKDFSN 410
>gi|17565368|ref|NP_505683.1| Protein PAP-1 [Caenorhabditis elegans]
gi|3880758|emb|CAA16309.3| Protein PAP-1 [Caenorhabditis elegans]
Length = 655
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/504 (41%), Positives = 305/504 (60%), Gaps = 32/504 (6%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+++PISLA P D+ +T L + L+ YE +EE R EVL L+++VK WVK +
Sbjct: 12 LGVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNV 71
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ K N + + A K+FTFGSYRLGVH GADIDTL V PRH R DFF +ML
Sbjct: 72 TAMKIPNGEGVN-AGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLN 129
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P+ ++S D++L+N D+++V
Sbjct: 130 NDPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESV 189
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRV +Q+L+LVP+ + F TLR ++ WAK G+YSN GF GGI WA+LVAR CQ
Sbjct: 190 RSLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQ 249
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKYHLM 303
LYPNA PS LV R F +++ W WP+PV+L + +L VWDPRR D++H+M
Sbjct: 250 LYPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVM 309
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PIITPA+P NS++NV+ ST ++ +E EIC + +E W LFE FF Y
Sbjct: 310 PIITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDI--SEGKSKWTALFEEVNFFSRY 367
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG----------D 413
K+++ + ++A N ++ N+ G++ESR+R L +ER+ +++ H P D
Sbjct: 368 KHFIALIMAAPNEEEELNYGGFLESRIRLLVQSLERN-QDIIIAHNDPNKHKPSPNAKFD 426
Query: 414 FSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM------Q 467
+ ++K + +F+GL+ + + D+ ++ FK V + G+ Q
Sbjct: 427 VNPENKRVTV-WFIGLEFAE-----HAKTLDLTNEIQRFKTNVELQASNVKGIGPNCQVQ 480
Query: 468 ISVAHVTRRNLPNFVFPGGVRPSR 491
I + +V R +L + +R R
Sbjct: 481 IDMFYVKRNSLIQVISAADLRRGR 504
>gi|755872|gb|AAA64708.1| poly(A) polymerase [Xenopus laevis]
Length = 394
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/364 (53%), Positives = 255/364 (70%), Gaps = 4/364 (1%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
GS Q+ GIT PISLA P D D T+KL + L+ ++E ++E R +LG+L+ +
Sbjct: 9 GSQQSQKTYGITSPISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILILGKLNNL 68
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK W+++IS K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF
Sbjct: 69 VKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFF 127
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L
Sbjct: 128 SSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 187
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N D + +RSLNGCRVTD+IL LVP I +FR TLR ++ WAKR +YSN+ GFLGG++WA
Sbjct: 188 KNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 247
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 248 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 307
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 308 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKA--EWSKLFDAPNFF 365
Query: 361 EAYK 364
+ YK
Sbjct: 366 QKYK 369
>gi|366987349|ref|XP_003673441.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
gi|342299304|emb|CCC67054.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/396 (46%), Positives = 277/396 (69%), Gaps = 5/396 (1%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
N Q++ GIT P+S+AGPT + +L + L+ N +E+++E +R +VL L + +
Sbjct: 2 NYQKVYGITGPVSVAGPTAPENKLNDELIQELKKENSFETEQETANRVKVLETLQMLTEK 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVFQVSKNKNMSDGMAKDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL + +P +L +S ++L+N
Sbjct: 121 DALLRERDELDEIAPVPDAFVPIIKMKFSGISIDLICARLDIAQVPLNLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR +Y+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAIYANIFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST +++++EF RG ++ + N+ W LF+ FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILEEFARGIQVTNDIFSNKG--TWADLFQKHDFFYKY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL I +S + +D+ W G VES+ R L LK+E
Sbjct: 359 KFYLTITVSTKGSDEEHLKWSGLVESKTRLLVLKLE 394
>gi|406606978|emb|CCH41700.1| poly(A) polymerase [Wickerhamomyces ciferrii]
Length = 572
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/533 (40%), Positives = 319/533 (59%), Gaps = 55/533 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PISLAGPT + + +L + L+ +ES+ E R EVL L + +V K+S
Sbjct: 8 GVTPPISLAGPTPAENVLNDQLIQELKKQGNFESESETKKRIEVLQLLQNLATNFVYKVS 67
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ K +++ + ++A KIFT+GSYRLGV+GPG+DIDTL V P+H TR+ DFF ++L
Sbjct: 68 KNKNMSEGMAKDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFTVFDELLRT 126
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
E+ E+ PVPDA VP++K K SG+ IDL+YA+L L +P +L + ++L+N DE+ +R
Sbjct: 127 RSELEEIAPVPDAFVPIIKVKISGIEIDLIYAKLDLPQVPINLTLGDKNLLRNLDEKDLR 186
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RVTD+IL+LVPK F+ +LR ++ WA+RR +Y+N+ GF GG+ WA+LVARICQL
Sbjct: 187 SLNGTRVTDEILQLVPKPVVFKLSLRAIKLWAQRRAIYANIFGFPGGVAWAMLVARICQL 246
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV S++VS+FF + TQW WP PVLL IE+G L ++VW+PR P+D+ H MP+ITPA
Sbjct: 247 YPNAVSSVIVSKFFHILTQWNWPQPVLLKPIEDGPLQVRVWNPRVYPQDRQHRMPVITPA 306
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP M +++N++ ST +++++E QRG I + ++ W+ LF FF YK YL I
Sbjct: 307 YPSMCATHNITASTQKVILNELQRGSLIMNDIISHKK--QWEDLFVKHDFFYKYKFYLNI 364
Query: 370 DISAENADDLRN--WKGWVESRLRQLTLKIER-------HTY--------------NMLQ 406
I+ DD ++ W G VES+LR L K+E H Y + +
Sbjct: 365 -IAFTRGDDEQHLKWSGLVESKLRLLVQKLENFQGINLAHPYVKTFEKSYLYSSDEELRE 423
Query: 407 CHPHPGDFS--------------DKSKPL--------YCSYFMGLQRKQGVPVGEGEQFD 444
+ G+FS +K P+ + S ++GL GE ++FD
Sbjct: 424 IELNFGNFSKESNLKKFKEITEENKEDPIPEGSKIIHFTSLYIGLDITVS---GEDKKFD 480
Query: 445 IRLTVKEFKQAVSMYTLRKPGM--QISVAHVTRRNLPNFVF-PGGVRPSRPSK 494
I + +F + + +++ HV +LP+FV+ G RP +P+K
Sbjct: 481 IHVPCNDFFTLCRGFPDYNDSLIYGLNIKHVKLYDLPSFVYGEGETRPEKPNK 533
>gi|1256822|gb|AAC52586.1| poly(A) polymerase III [Mus musculus]
Length = 375
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/355 (54%), Positives = 251/355 (70%), Gaps = 3/355 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLLPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYK 372
>gi|353242336|emb|CCA73989.1| probable PAP1-poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 624
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/571 (38%), Positives = 322/571 (56%), Gaps = 61/571 (10%)
Query: 1 MGSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
M + QR G+T PIS GP+ ++ L L+ +ES EE +RE VLGR+ +
Sbjct: 1 MNQTTEQRDYGVTPPISRDGPSPQEITLAADLMTELK--GTFESAEEGRTREAVLGRVTK 58
Query: 60 IVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF 119
+VK ++ + + L++ + A KI+TFGSYRLGVHGPG+DIDTL V P+H R+ DF
Sbjct: 59 LVKEFIYQACIRRNLSEAAAKAAGGKIYTFGSYRLGVHGPGSDIDTLVVAPKHVDRQ-DF 117
Query: 120 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 179
+L + V E +PVPDA+VPV+ K G+S+D +ARL+L VIP+DL++ DS+
Sbjct: 118 MEIFLDLLQKDDWVEEANPVPDAYVPVIDAKIKGISMDFTFARLALSVIPDDLELGDDSL 177
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+N D++ VRSLNG R TD ILRLVP + FR LR +++WA+RR +YSNV+GFLGGI W
Sbjct: 178 LKNLDDKCVRSLNGSRSTDAILRLVPNVHVFRDALRAIKYWAQRRAIYSNVSGFLGGIAW 237
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
ALLVAR+CQLYPN + +V RFF + + W+WP PV+L IEEG+L ++VW+P+ P D+
Sbjct: 238 ALLVARVCQLYPNGNAATIVRRFFLIMSMWKWPQPVVLKKIEEGNLNMRVWNPKIYPSDR 297
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
H MPIITPAYP M S++NV T I+ +E +RG E+ + EA W LF TF
Sbjct: 298 AHKMPIITPAYPSMCSTHNVMNCTFEIIQEELKRGQELIVRITNGEA--KWADLFTKHTF 355
Query: 360 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS---- 415
F Y+ YL+I S ++ + + W VES+ RQL K+E + + + HP F+
Sbjct: 356 FSQYQYYLQIIASCDDEEIQKKWSKTVESKGRQLVGKLE-ESGTLARVHPFVKGFNKTYY 414
Query: 416 ------------------------DKSKPL---------YCSYFMGLQRKQGVP---VGE 439
+++K + ++++G++ + P
Sbjct: 415 TVTMQEHADIVLGNVPPAVANRTEEEAKQIESNERQVIHTTTFYIGMEITRPPPSVTTTG 474
Query: 440 GEQFDIRLTVKEF-KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWD 498
+ DI + EF K A S + M I+V H+ LP+ VF G RP
Sbjct: 475 PRKLDISIPTSEFMKTARSWELYQNDIMGIAVRHIKNSALPDEVFEGAPRP--------- 525
Query: 499 SRRALERKVSSHTK---PGADDGRKRKQTDD 526
R+ L+R S GA ++R+ +DD
Sbjct: 526 -RKGLKRVAKSKVPIDGEGAQATKRRRPSDD 555
>gi|320038983|gb|EFW20918.1| Poly(A) polymerase [Coccidioides posadasii str. Silveira]
Length = 590
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/521 (39%), Positives = 303/521 (58%), Gaps = 32/521 (6%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M +S ++ G T PIS A PT +L L L+ N +E+ E R ++L + ++
Sbjct: 1 MATSQVKQWGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK + R KGL+ + + KIF +GSYRLGV+GPG+DIDTL VGP+H E DFF
Sbjct: 61 TVEFVKTVGRRKGLSQAAIDVSGGKIFPYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ L + + +L PVPDA+VP++K + SG+SIDL++ARL + IP DLD+
Sbjct: 120 LDFPPTLERLAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+ R +YSNV GF GG+
Sbjct: 180 ELLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E +RG +I E + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKH 357
Query: 358 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP----- 411
TFF YK YL I S+ + + W G VE++LR L + +++ ++ HP P
Sbjct: 358 TFFSKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKA-SIEVAHPFPKAHVA 416
Query: 412 ----------------GDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQA 455
+ S+ +Y++GL+ K VP G DI FK
Sbjct: 417 ALESANGSINMPGLGQTEESNNHTLHTTTYYIGLELKPLVP-GASRSLDISSETHMFKNM 475
Query: 456 VSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSRPSK 494
+ + +PG+ +++ HV +LP VF PG RP RP K
Sbjct: 476 CTSWAQYQPGINDLTITHVRNYDLPEDVFHPGETRPVRPKK 516
>gi|341899656|gb|EGT55591.1| hypothetical protein CAEBREN_21062 [Caenorhabditis brenneri]
Length = 684
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/496 (41%), Positives = 302/496 (60%), Gaps = 42/496 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+++PIS+A P DL T +L + L++ YE +EE R EVL L+++VK WVK +
Sbjct: 37 LGVSQPISVAHPDAKDLALTEQLIETLKEFKSYEPKEETDKRLEVLRALNRLVKEWVKNV 96
Query: 69 SRAK-----GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+ K G N A K+FTFGSYRLGVH GADIDTL V PRH R DFF
Sbjct: 97 TAIKIPSGDGAN------AGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSF 149
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+ML + P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P++ ++S D +L+N
Sbjct: 150 KEMLNQDPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALREVPDNQELSDDQLLRNL 209
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D +++RSLNGCRV +Q+L+LVP+ + F T LR ++ WAK G+YSN GF GGI+WA+L+
Sbjct: 210 DPESIRSLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAILI 269
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKD 298
AR CQLYPNA PS LV R F +++ W WP+PVLL + + +L +WDPR D
Sbjct: 270 ARACQLYPNASPSKLVHRMFFIFSTWTWPHPVLLKELNQDRNDIPTLCELIWDPRHKNTD 329
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
++HLMPIITPA+P NS++NV+ ST +I+ DE EIC + A W LFE
Sbjct: 330 RFHLMPIITPAFPEQNSTHNVTRSTHQIIKDEIWEALEICRDIHDGRA--KWSALFEEVN 387
Query: 359 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG------ 412
FF YK+++ + ++A N ++ ++ G++ESR+R L +ER+ +++ H P
Sbjct: 388 FFSRYKHFIALIMAAPNEEEELSYGGFLESRIRLLVQSLERNP-DIILAHNDPNKHKPSK 446
Query: 413 ----DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM-- 466
D S ++K + +F+GL+ + + D+ ++ FK V + G+
Sbjct: 447 NAKFDVSPENKRITV-WFIGLEFAE-----HAKNLDLTNEIQRFKTNVELQASSVKGIGP 500
Query: 467 ----QISVAHVTRRNL 478
+I + +V R NL
Sbjct: 501 TCQVEIDMFYVKRNNL 516
>gi|392579948|gb|EIW73075.1| hypothetical protein TREMEDRAFT_67196 [Tremella mesenterica DSM
1558]
Length = 648
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/434 (44%), Positives = 273/434 (62%), Gaps = 13/434 (2%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS P D+ + L K L +N +ES++E RE +L + Q+V +V +S
Sbjct: 7 GVTPPISTDPPRPSDIQASEALMKDLIALNQFESEQERKVRERLLSNIAQLVTKFVHDVS 66
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
GL++++ EA +I+T GSYRLGVHGPG+DIDT+CV PRH +E FFGE +ML
Sbjct: 67 IKSGLSEKVASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHVFKEH-FFGEFKEMLRA 125
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
P VTE+ V A VPVMK SGV +DLL+AR++L + LD+ +D IL+ D+ + R
Sbjct: 126 WPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLAEAGDKLDLEKDEILRGVDDASQR 185
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
LNG RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL ARICQL
Sbjct: 186 GLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQL 245
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIIT 307
YP A P+ +V++FF ++ QW WPNPVLL IE G + VW+P+ + +D H MPIIT
Sbjct: 246 YPTAAPATIVAKFFPIFYQWGWPNPVLLKKIESGPPNMHHSVWNPKLDRRDMAHRMPIIT 305
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
PAYP M +++N++ ST+ ++ +E R ++ + + N W LFE FF YK+Y+
Sbjct: 306 PAYPSMCTTHNITASTMSVIKNEMLRAMQVTDRIMSNPGS-SWMELFEQIDFFSMYKSYV 364
Query: 368 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFM 427
++ SA ++ +++W G VESR+R L +E ++ N++ HP G S + F+
Sbjct: 365 QVIASASTSEGIKDWGGTVESRIRTLVQDLE-NSDNIITAHPQMGGIS--------ATFL 415
Query: 428 GLQRKQGVPVGEGE 441
L ++ +GE
Sbjct: 416 CLTEEEQAAASQGE 429
>gi|321249627|ref|XP_003191515.1| polynucleotide adenylyltransferase [Cryptococcus gattii WM276]
gi|317457982|gb|ADV19728.1| Polynucleotide adenylyltransferase, putative [Cryptococcus gattii
WM276]
Length = 644
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/524 (40%), Positives = 299/524 (57%), Gaps = 48/524 (9%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PI+ P +D+ + L L +N +ES +E RE +L + Q+V +V +
Sbjct: 10 LGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLVAKFVHDV 69
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S G+++++ EA +I+T GSYRLGVHGPG+DIDT+CV PRH RE FFGE ML
Sbjct: 70 SIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREH-FFGEFQDMLR 128
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
P VTE+ V A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+ +
Sbjct: 129 AWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDLLDIEKDEILRGVDDASQ 188
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNG RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL ARICQ
Sbjct: 189 RSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQ 248
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPII 306
LYP A P+ +V +FF +Y QW WP PVLL I+ G +Q VW+P+ + +D+ H MP+I
Sbjct: 249 LYPAAAPATIVGKFFPIYYQWNWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVI 308
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP M S++N+++ST+ I+ E R +I + + K W LFE FF YK Y
Sbjct: 309 TPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPGS-SWIPLFEKVDFFSMYKTY 367
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC--- 423
+++ SA +D +++W G VESR+R L +E +T ++ HP G ++ YC
Sbjct: 368 VQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---NRVFYCLTE 423
Query: 424 ----------------------------------SYFMGLQRKQGVPVGEGEQFDIRLTV 449
S+F+GL+ ++ G ++
Sbjct: 424 EEQAAASQGELTAEMIDRTEEDVEGKEHRKIYTKSFFIGLEIEKKSKESGGRVLNLFYPS 483
Query: 450 KEFKQAVSMYTLRKPGMQISVA--HVTRRNLPNFVFPGGVRPSR 491
K+F AV + M++SV R LP +VFP G+ S+
Sbjct: 484 KKF-CAVCQNWDKYNEMEMSVILRPAKRSELPPYVFPDGMPKSK 526
>gi|156843263|ref|XP_001644700.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115348|gb|EDO16842.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 572
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/421 (44%), Positives = 283/421 (67%), Gaps = 10/421 (2%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
N Q++ GIT P+S A PT + +L + L+ +ES++E R +VL Q+ +
Sbjct: 2 NYQKVYGITGPVSTASPTAAENKLNDELIQELKKEGSFESEQETAKRVKVLEIFQQLAQE 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S++K ++D + +++ K+FTFGSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYRVSKSKNMSDGMAKDSGGKVFTFGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
++L + E+ E+ PVPDA+VP++K KF G+SIDL+ ARL + +P+ L +S ++L+N
Sbjct: 121 DELLRKRKELEEIAPVPDAYVPIIKTKFDGISIDLICARLDVAQVPQTLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRCHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST ++++ EF+RG EI + N+A W+ LF+ TFF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILKEFERGVEITNNIFSNKA--TWEDLFKRHTFFHDY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 422
K YL + S + D+ W G VES++R L LK+E + HP+ F Y
Sbjct: 359 KFYLTVTASTKGNDEQHLKWSGLVESKVRLLILKLEALP-GIKSAHPYVKPFEST----Y 413
Query: 423 C 423
C
Sbjct: 414 C 414
>gi|50304345|ref|XP_452122.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641254|emb|CAH02515.1| KLLA0B13255p [Kluyveromyces lactis]
Length = 598
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/396 (45%), Positives = 270/396 (68%), Gaps = 4/396 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S + G+T PIS GPT + L + L+ +E++EE R VL ++ +
Sbjct: 2 SQKKIFGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQE 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A K+FTFGSYRLGVHGPG+DIDTL V P+H +RE DFF
Sbjct: 62 FVYQVSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E PE+ E+ VPDA VP++K KF+G+SIDL++A+L L +P L +S ++L+N
Sbjct: 121 DALLRERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNV 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVP +F+ LR ++ WAKRR VY+NV GF GG+ WA+ V
Sbjct: 181 DEKDLRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
RICQLYPNA ++++S+FF++ ++W+WP PVLL IE+G L ++VW+P+ +D+ H M
Sbjct: 241 VRICQLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N+S ST ++++ E QRG E+ + + NE + W+ LF+ FF Y
Sbjct: 301 PVITPAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNE--LSWEDLFKKHDFFFKY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL + +S + +D+ W G+VES+LR L K+E
Sbjct: 359 KFYLTVMVSTKGSDEQHLKWSGFVESKLRLLVQKLE 394
>gi|45185228|ref|NP_982945.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|44980886|gb|AAS50769.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|374106148|gb|AEY95058.1| FABL002Cp [Ashbya gossypii FDAG1]
Length = 598
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/412 (46%), Positives = 274/412 (66%), Gaps = 5/412 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S + G+T PIS GPT + +L + L+ +ES+EE R +VL L + +
Sbjct: 2 SQQKVYGVTGPISKEGPTAAENKLNDELIQELKKEGTFESEEETAKRIKVLEELQALAQE 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V K+SR + +++ + ++A KIFTFGSYRLGVHGPG+DIDTL V P+H TR+ DFF
Sbjct: 62 FVFKVSRKRNMSEGMARDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVTRD-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
++L PE+ E+ PVP+A VP++K K+SG+SIDL+ ARL + +P +L +S ++L+N
Sbjct: 121 DELLRARPELDEIAPVPEAFVPIIKIKYSGISIDLICARLDIPQVPLNLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK F+ LR ++ WA+RR VY+NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPTAFKIALRAIKLWAQRRAVYANVFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++V+RFF + T+W WP PVLL IE+G L ++VW+P+ D+ H M
Sbjct: 241 ARICQLYPNACSAVIVARFFHILTRWSWPQPVLLKPIEDGPLQVRVWNPKIYANDRLHKM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M S++N+ ST +++++E QRG E+ + N+ W LF+ FF Y
Sbjct: 301 PVITPAYPSMCSTHNICESTKKVILNELQRGVEVTTDIFTNKK--TWGDLFQKHDFFYKY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
K YL + S + +D+ W G VES+LR L LK+E + L HP+ F
Sbjct: 359 KFYLTVMASTKGSDEQHLKWSGLVESKLRLLVLKLEVLSGINL-AHPYTKPF 409
>gi|134107007|ref|XP_777816.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260514|gb|EAL23169.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 643
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/525 (40%), Positives = 301/525 (57%), Gaps = 49/525 (9%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PI+ P +D+ + L L +N +ES +E RE +L + Q+V +V +
Sbjct: 10 LGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLVAKFVHDV 69
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S G+++++ EA +I+T GSYRLGVHGPG+DIDT+CV PRH RE FFGE ML
Sbjct: 70 SIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREH-FFGEFQDMLR 128
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
P VTE+ V A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+ +
Sbjct: 129 AWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDDASQ 188
Query: 189 RSLN-GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
RSLN G RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL ARIC
Sbjct: 189 RSLNAGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARIC 248
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPI 305
QLYP A P+ +V +FF +Y QW WP PVLL I+ G +Q VW+P+ + +D+ H MP+
Sbjct: 249 QLYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPV 308
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
ITPAYP M S++N+++ST+ I+ E R +I + + K D W LFE FF YK
Sbjct: 309 ITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKT-PDSSWIPLFEKVDFFSMYKT 367
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC-- 423
Y+++ SA +D +++W G VESR+R L +E +T ++ HP G ++ YC
Sbjct: 368 YVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---NRVFYCLT 423
Query: 424 -----------------------------------SYFMGLQRKQGVPVGEGEQFDIRLT 448
S+F+GL+ ++ G ++
Sbjct: 424 EEEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYP 483
Query: 449 VKEFKQAVSMYTLRKPGMQISVA--HVTRRNLPNFVFPGGVRPSR 491
K+F AV + M++SV R LP++VFP G+ S+
Sbjct: 484 SKKF-CAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSK 527
>gi|294657491|ref|XP_459799.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
gi|199432733|emb|CAG88038.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
Length = 571
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/413 (46%), Positives = 275/413 (66%), Gaps = 5/413 (1%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N Q G+T PIS+A PT + L K L+ +ES+ R EVL L ++ + +
Sbjct: 2 NYQAYGVTPPISVANPTPKENSLNDSLIKELKSRGSFESEAATKKRVEVLHILQKLTEEF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V +S K +N+ + ++A KIFTFGSYRLGV+GPG+DIDTL V P+H TR DFF
Sbjct: 62 VYTVSINKNMNEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTRS-DFFEVFD 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L + PE+ E+ V DA+VP++K +F G+SIDL+ ARL + IP+DL + ++L+N D
Sbjct: 121 KILRKRPELEEIASVSDAYVPIIKMEFGGISIDLICARLDIPRIPKDLKLDDKNLLRNID 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LVA
Sbjct: 181 EKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV +++V +FF +Y QW WP PVLL IE+G L ++VW+P+ P D+ H MP
Sbjct: 241 RICQLYPNAVSAVIVEKFFHIYAQWSWPQPVLLKPIEDGPLQVRVWNPKLYPHDRQHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N+++ST +I++DEF+RG +I + N++ W L TFF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKIILDEFKRGIDIMSQISMNKS--TWSDLLARHTFFYKYK 358
Query: 365 NYLRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
YL I + + +++D W G VESRLR L K+E T + HP+ F +
Sbjct: 359 FYLCIVAATQGSSEDHLKWGGMVESRLRLLIQKLEM-TEGIEIAHPYVKPFEN 410
>gi|324975487|gb|ADY62671.1| PAPa [Candida metapsilosis]
Length = 547
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/407 (45%), Positives = 273/407 (67%), Gaps = 5/407 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS A PT + L L+ +ES+ R EVL +V+ +V ++S
Sbjct: 6 GVTGPISTADPTAKEFSLNESLIHELKGRGSFESESATKKRAEVLSLFQTLVQEFVYEVS 65
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
++K ++D + ++A KIFTFGSYRLGV+GP +DID L V PRH TRE DFF Q++ +
Sbjct: 66 KSKNMSDGMSRDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTTFDQIIRK 124
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
PE+ E++ V DA VP++K +F G+S+DL+ ARL++ +P D+ + ++L+N DE+ +R
Sbjct: 125 RPELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLR 184
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RVTD+IL+LVPK F+ LRC++ WA+ R VY NV GF GG+ WA+L ARICQL
Sbjct: 185 SLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQL 244
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV S++V +FF +YT+W WP PVLL AIE+G L ++VW+PR D+ H MP+ITPA
Sbjct: 245 YPNAVSSVIVEKFFSIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRLHRMPVITPA 304
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-R 368
YP M +++N+++ST ++++ E RG + +++ E + W LFE FF Y+ YL
Sbjct: 305 YPSMCATHNITSSTQKVIIQELLRGASVMKSI--FEGEKTWSDLFERHNFFHRYRFYLCV 362
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
+ + ++A++ W G+VES+LRQL LK+E T + HP+ DFS
Sbjct: 363 VAATVDSAEEHHKWHGFVESKLRQLVLKLES-TEGIEIAHPYVKDFS 408
>gi|71031845|ref|XP_765564.1| poly(A) polymerase [Theileria parva strain Muguga]
gi|68352521|gb|EAN33281.1| poly(A) polymerase, putative [Theileria parva]
Length = 507
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 303/490 (61%), Gaps = 21/490 (4%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
+ GIT+P+S GPT++DL +R+L L+ NLYE++E RE++L L+++++ +V++
Sbjct: 12 QYGITDPVSHEGPTNNDLKASRELLNLLKSHNLYETEEGKKRREDILESLNRLLQQFVRR 71
Query: 68 ISR-AKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++ +GL DQ + + K+ TFGSYRLG+ P +DID LC+ PR TRE FF + +
Sbjct: 72 QAKITRGLTDQEASQVSGKLLTFGSYRLGIVAPDSDIDVLCLCPRSVTRES-FFSDFYNT 130
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L ++ +++L VPDA+ PV+K F +SID+L+A L + +++ D+IL+N ++
Sbjct: 131 LNKVDGISKLQAVPDAYTPVIKLYFYDISIDILFANLDAPTVSPHINVLDDNILRNMNDS 190
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRS+NGCRV IL VP FRTTLR ++ WA RR +YS V G+LGG+ WA+L AR+
Sbjct: 191 TVRSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARV 250
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYH 301
CQLYPN P+ L+ +FFRVY+ W+W PV LC I+E G + +VWDPR NP+D++H
Sbjct: 251 CQLYPNCAPNQLIEKFFRVYSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHH 310
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPA+P MNS++NV+ +T R++ +E R EI + ++ W+ + E F
Sbjct: 311 LMPIITPAFPSMNSTHNVTATTKRVITEELMRALEIFKTSNLTNVEL-WEKVLEEEDVFS 369
Query: 362 AYKNYLRIDISAENADDLRN-WKGWVESRLRQLTLKIER--HTYNMLQCHPHPG--DFSD 416
YK++L I++ N N W+GW+ SR+R L ++E +TY P PG F D
Sbjct: 370 NYKHFLVIEVYGSNEHVAHNKWEGWIGSRMRFLISRLENLGNTY----IRPIPGFFKFED 425
Query: 417 KSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQIS--VAHV 473
+ S F + GV V + DIR +V+ FK ++ ++ + K QIS + H+
Sbjct: 426 DNWDYASSAFFAFKVISGV-VETSKTLDIRSSVQSFKDIINNWSDMEKYRDQISFNIKHL 484
Query: 474 TRRNLPNFVF 483
LP++V
Sbjct: 485 KNNQLPDYVL 494
>gi|328772740|gb|EGF82778.1| hypothetical protein BATDEDRAFT_9489 [Batrachochytrium
dendrobatidis JAM81]
Length = 556
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/412 (48%), Positives = 276/412 (66%), Gaps = 4/412 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ LG+T PIS PT+ ++ T +L + LRD YES+EEA RE VLG++D I K +V+
Sbjct: 23 RHLGVTPPISENPPTEKEIACTEQLVQTLRDYGQYESEEEAQKREIVLGKIDAIFKEFVR 82
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S GL + L + KIFTFGSYRLGVHG +DIDTLCV P+H RE DF ++++
Sbjct: 83 SVSIKNGLPESLANDVGGKIFTFGSYRLGVHGKKSDIDTLCVAPKHVKRE-DFLEYMYEL 141
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV+E+ V DA+VP++K +FS +SIDL++ARL+L + EDLD+S DS+L+N D++
Sbjct: 142 LKARQEVSEITAVADAYVPIIKLEFSDISIDLVFARLALPTVSEDLDLSDDSLLKNLDDR 201
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNG RVTD ILRLVP ++ FR LRC++ WA +R +YSNV GF GG+ WA+L+AR+
Sbjct: 202 CIRSLNGSRVTDDILRLVPNVETFRIALRCIKLWALQRAIYSNVMGFFGGVAWAILIARV 261
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYP A +VS+FF++ +W WP PVLL IEEG L ++VW+P+ P+DK H MPII
Sbjct: 262 CQLYPCAAAGEVVSKFFQIMYRWEWPLPVLLKPIEEGPLAVRVWNPKIYPQDKAHRMPII 321
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP M S++NV+ ST + EF+R + + W LF+ FF YK Y
Sbjct: 322 TPAYPSMCSTHNVTVSTQTVTTQEFERAAVTTDKIMLGRE--KWTVLFQKNDFFHRYKYY 379
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
L++ S+ + + W G+VESRLRQL +K+E N+ HP+ F K+
Sbjct: 380 LQVIASSNDDEKQLMWAGFVESRLRQLVMKLEL-AENLDIAHPYIKGFDKKT 430
>gi|1709575|sp|P51006.1|PAPO3_XENLA RecName: Full=Poly(A) polymerase type 3; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|643648|gb|AAC59747.1| poly(A) polymerase type 3, partial [Xenopus laevis]
Length = 400
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/364 (53%), Positives = 253/364 (69%), Gaps = 4/364 (1%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
GS Q+ GIT PISLA P D D T+KL + L+ ++E ++E R LG+L+ +
Sbjct: 9 GSQQSQKTYGITSPISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILSLGKLNNL 68
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK W+++IS K L +++ KIFTFGSYRLGVH GADID LCV PRH R D F
Sbjct: 69 VKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DLF 127
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L
Sbjct: 128 SSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 187
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N D + +RSLNGCRVTD+IL LVP I +FR TLR ++ WAKR +YSN+ GFLGG++WA
Sbjct: 188 KNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 247
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 248 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 307
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 308 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKA--EWSKLFDAPNFF 365
Query: 361 EAYK 364
+ YK
Sbjct: 366 QKYK 369
>gi|350638725|gb|EHA27081.1| hypothetical protein ASPNIDRAFT_46294 [Aspergillus niger ATCC 1015]
Length = 579
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/537 (39%), Positives = 305/537 (56%), Gaps = 47/537 (8%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ G+T PIS PT D+L L L+ N +ES E R++VL + ++
Sbjct: 1 MAAPPVRQWGVTPPISTVLPTPDELAANDDLITELKVQNNFESPAETERRKQVLQLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ ++ A KIFT+GSYRLGV+GPG+DIDTL VGP+H + DFF
Sbjct: 61 TVEFVKTVSRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVIID-DFF 119
Query: 121 GELHQMLTEMPE---VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L +M + ++ PVPDA+VP++K + SG+SIDL++ARL + IP +LD+ +
Sbjct: 120 SDFPPILEKMAAPGAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPMNLDLKNN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E QRG +I + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQ--LRWEDLFARH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-- 414
TFF + YK YL I S+ + W G VES++R L ++R + HP P F
Sbjct: 358 TFFTKDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDRKA-TIAIAHPFPKGFER 416
Query: 415 --------------------SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV-KEFK 453
DK + M Q E D+ K
Sbjct: 417 VHRVSSEEEIEAVKTGSTKYQDKGTKTETTDEMKDAAHQAAAQNGAENTDVAAAENKPVD 476
Query: 454 QAVSMYTLR----------KPGMQ-----ISVAHVTRRNLPNFVF-PGGVRPSRPSK 494
MYT +PG Q +++ HV +LP VF PG RP+RP K
Sbjct: 477 DTHVMYTTTYYIGLELKPLEPGYQPGINDLAITHVRNFDLPEDVFQPGETRPTRPKK 533
>gi|254578066|ref|XP_002495019.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
gi|238937909|emb|CAR26086.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
Length = 567
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/396 (46%), Positives = 270/396 (68%), Gaps = 5/396 (1%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
N Q++ GIT P+S AGPT + +L + L+ +ES++E +R +VL L ++ +
Sbjct: 2 NYQKVYGITGPVSTAGPTAAENKLNDELIQELKKEGSFESEQETANRIKVLKILQELAQE 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A KIFTFGSYRLGVHGPG+DIDTL V P+H RE DFF L
Sbjct: 62 FVYRVSKKKNMSDGMARDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVMRE-DFFTVL 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
++L PE+ E+ PVPDA VP++K KFSG+SIDL+ A+L L IP+ L +S ++L+N
Sbjct: 121 DEILRSRPELEEIAPVPDAFVPIIKIKFSGISIDLICAKLDLAQIPQSLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA RR +Y+NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWANRRAIYANVFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNATSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST R+++ E + G I + N+ W LF FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKRVILQELENGISITNDIFSNKK--TWSDLFTKHNFFYKY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL + S D+ W G VES++R L LK+E
Sbjct: 359 KFYLTVMASTRGTDEENLKWSGMVESKVRLLVLKLE 394
>gi|121700911|ref|XP_001268720.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
gi|119396863|gb|EAW07294.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
Length = 598
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 319/560 (56%), Gaps = 70/560 (12%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ G+T PIS A PT D+L L L+ N +ES E R++VL L ++
Sbjct: 1 MSTPPVRQWGVTPPISTALPTSDELAANDDLISELKTQNNFESPAETERRKQVLQLLQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ ++ A KIFT+GSYRLGV+GPG+DIDTL VGP+H + DFF
Sbjct: 61 ALEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLID-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L +M + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ +
Sbjct: 120 SDFPPVLEKMAPPGAIEKMTPVPDAFVPIIKMELSGISIDLIFARLIVSSVPLNLDLKNN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E QRG +I + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQ--MTWNDLFARH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-- 414
+FF + YK YL I S++ + W G VES++R L ++R + HP P F
Sbjct: 358 SFFTQDYKYYLSITASSKTKEAESVWSGLVESKIRHLVGALDRKN-TIAVAHPFPKGFER 416
Query: 415 -----------------------------SDKSKPL--YCSYFMGLQRKQGVPVGEGEQF 443
+D++ + + G++ + PVG+ E
Sbjct: 417 VHLVSSEEEAEAVKNGSTKYQDKGTKTETTDETNDIAHQAAAQNGVENAEVEPVGQKENG 476
Query: 444 DIR----------LTVKE-----------------FKQAVSMYTLRKPGMQ-ISVAHVTR 475
D R L +K FK + + +PG+ +++ HV
Sbjct: 477 DSRTIYTTTYYIGLELKPLEPGASRSLDISTDAQIFKSTCTSWAGYQPGINDLAITHVRN 536
Query: 476 RNLPNFVF-PGGVRPSRPSK 494
+LP+ VF PG RP+RP K
Sbjct: 537 FDLPDDVFQPGETRPTRPKK 556
>gi|324975520|gb|ADY62700.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/408 (44%), Positives = 275/408 (67%), Gaps = 5/408 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T P+S A PT ++ L + L+ +ES+ R EVL +V+ +V ++S
Sbjct: 6 GVTGPVSTADPTTKEISLNESLIQELKGRGSFESESATKKRAEVLSLFQTLVQQFVYEVS 65
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K ++D + ++A KIFTFGSYRLGV+GP +DID L V PRH TRE DFF +++ +
Sbjct: 66 ISKNMSDGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTTFDKIIRQ 124
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
PE+ E++ V DA VP++K +F G+S+DL+ ARL++ +P D+ + ++L+N DE+ +R
Sbjct: 125 RPELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLR 184
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RVTD+IL+LVPK F+ LRC++ WA+ R VY NV GF GG+ WA+L ARICQL
Sbjct: 185 SLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQL 244
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV +++V +FF +YT+W WP PVLL AIE+G L ++VW+PR D+ H MP+ITPA
Sbjct: 245 YPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPA 304
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-R 368
YP M +++N+++ST ++++ E RG I +++ + E W LF FF Y+ YL
Sbjct: 305 YPSMCATHNITSSTQKVILQELTRGSSIMKSILEGEK--SWSDLFARHDFFHRYRFYLCV 362
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
+ ++E+A++ W G+VES+LRQL +K+E T + HP+ DFS+
Sbjct: 363 VAATSESAEEHHKWHGFVESKLRQLVIKLES-TEGVELAHPYVKDFSN 409
>gi|410079098|ref|XP_003957130.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
gi|372463715|emb|CCF57995.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
Length = 567
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 281/421 (66%), Gaps = 10/421 (2%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
N Q++ GIT P+S AGPT + L + L+ N +E+++E +R EVL L ++ +
Sbjct: 2 NYQKVYGITGPVSTAGPTAAENKLNDGLIQELKRNNSFETEKETANRVEVLKLLQELAQR 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V +S+ K ++D + ++A KIFTFGSYRLGVHGPG+DIDTL V P+H +RE DFF E
Sbjct: 62 FVFNVSKKKNMSDGMAKDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVSRE-DFFTEF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E E+ E+ PVPDA VPV+K K G+SIDLL A+L + +PE L +S +++L+N
Sbjct: 121 DSLLRERSELDEIAPVPDAFVPVIKIKLRGISIDLLCAKLDIAQVPESLVLSDNNLLRNV 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+ R VY+NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQNRAVYANVFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST +++++EF RG +I + ++ W LF FF Y
Sbjct: 301 PVITPAYPSMCATHNITDSTKKVILEEFSRGIQITNDIFSSKK--SWSDLFNKHEFFYKY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 422
K YL I S +D+ W G VES++R L LK+E + + HP F + +Y
Sbjct: 359 KFYLTITASTRASDEEHLKWSGLVESKVRLLVLKLEALS-GIKIAHPFIKPF----ETIY 413
Query: 423 C 423
C
Sbjct: 414 C 414
>gi|339236667|ref|XP_003379888.1| poly(A) polymerase gamma [Trichinella spiralis]
gi|316977404|gb|EFV60513.1| poly(A) polymerase gamma [Trichinella spiralis]
Length = 923
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/487 (41%), Positives = 292/487 (59%), Gaps = 30/487 (6%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GIT PIS+A PT+ DL ++ +LE+ L + L+ES E R EVL +++ + + W++
Sbjct: 207 EQYGITAPISMADPTELDLRQSEELERVLHEYGLFESDAELTHRMEVLRKVNLLFRQWIR 266
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S + + + KIFTFGSYRLGVH GADIDTLCV PRH RE DFF +
Sbjct: 267 DLSIQRNMPPDVADSVGGKIFTFGSYRLGVHTRGADIDTLCVAPRHILRE-DFFTSFKDL 325
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L PEV+E P+ +A VPV+K KF G+ +D+++ARL+L +PE+ + D +L+N D +
Sbjct: 326 LKSQPEVSECRPIEEAFVPVIKLKFDGIELDMVFARLALKEVPENQKLDDDELLRNLDVK 385
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKR-RGVYSNVAGFLGGINWALLVAR 245
+RSLNGCRVTD+IL LVP + FR TLR ++FWAKR +GVYSNV GFLGG++WA+LVAR
Sbjct: 386 CIRSLNGCRVTDEILNLVPNKETFRLTLRAIKFWAKRKKGVYSNVVGFLGGVSWAMLVAR 445
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL----CAIEEGSLGLQ--VWDPRRNPKDK 299
CQLYP A P++LV++ WP PVLL + G +G Q +WDPR D+
Sbjct: 446 TCQLYPRAAPNVLVNK--------EWPKPVLLKNSITSQNHGYIGFQELIWDPRVKQSDR 497
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
YHLMPIITPA+P NS++NVS++T I+ G + + E + W LFEP F
Sbjct: 498 YHLMPIITPAFPQQNSTFNVSSTTRSILQKFLHEGFLV--STEVICKGLSWPKLFEPSNF 555
Query: 360 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS---D 416
F YK+Y+ I A DL W G VES++R L + E H +L H +P FS +
Sbjct: 556 FVKYKHYIVISCFAATRADLITWSGLVESKMRYLIGQFE-HNTGVLLAHVNPEQFSPLEE 614
Query: 417 KSKPLYCSYFMGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVA 471
+ + +GL+ K+G+ + D+ ++ F ++ L + GM++
Sbjct: 615 HGDGVESFWVVGLEMNKEGIG---AKNIDLTSDIQSFVDSIMRQALNSDVWRQGMKVEAK 671
Query: 472 HVTRRNL 478
+ RR L
Sbjct: 672 YRRRREL 678
>gi|255713432|ref|XP_002552998.1| KLTH0D06380p [Lachancea thermotolerans]
gi|238934378|emb|CAR22560.1| KLTH0D06380p [Lachancea thermotolerans CBS 6340]
Length = 594
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/390 (46%), Positives = 265/390 (67%), Gaps = 4/390 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS AGPT + L + L+ +ES+E+ R EVL L + + +V ++S
Sbjct: 8 GVTGPISTAGPTAAENQLNDALIQELKKEKSFESEEDTKKRVEVLRILQNLAQEFVYQVS 67
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ + ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H TRE DFF Q+L
Sbjct: 68 KKRNMSDGMAKDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDQILRT 126
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
E+ E+ PVPDA VP++K KFSG+SIDL+ ARL + +P +L ++ ++L+N DE+ +R
Sbjct: 127 RSELEEIAPVPDAFVPIIKIKFSGISIDLICARLDIAQVPVNLTLADKNLLRNLDEKDLR 186
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
+LNG RVTD+IL+LVPK +F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQL
Sbjct: 187 ALNGTRVTDEILQLVPKPTSFKIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQL 246
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA +++++RFF + T+W WP PVLL IE+G L ++VW+PR +D+ H MP+ITPA
Sbjct: 247 YPNACSAVILTRFFHILTKWNWPQPVLLKPIEDGPLQVRVWNPRIYAQDRSHKMPVITPA 306
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP M +++N+S ST ++++ E +RG +I + N+ W LF+ FF YK YL +
Sbjct: 307 YPSMCATHNISESTKKVILAELERGAQISSEIFSNKK--TWSDLFQKHDFFYKYKFYLTV 364
Query: 370 DISAENADDLR-NWKGWVESRLRQLTLKIE 398
S + + W G VES+LR L K+E
Sbjct: 365 MASTSGSSEQHLKWSGLVESKLRLLVQKLE 394
>gi|367003753|ref|XP_003686610.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
gi|357524911|emb|CCE64176.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
Length = 555
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/396 (46%), Positives = 276/396 (69%), Gaps = 5/396 (1%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
N Q++ GIT P+S A PT + +L + L+ +ES++E +R +VL L ++ +
Sbjct: 2 NYQKVYGITGPVSTAAPTAAENKLNDELIQELKKEGSFESEQETNNRVKVLEILQKLTQD 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V K+ + K ++D + ++A K+FTFGSYRLGVHGPG+DIDTL V P++ TRE DFF
Sbjct: 62 FVYKVYKNKNMSDGMAKDAGGKVFTFGSYRLGVHGPGSDIDTLVVVPKYVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
Q L E E+ E+ PVPDA+VP++K KFSG+SIDL+ A+L + +P +L ++ ++L+N
Sbjct: 121 DQSLRERKELDEIAPVPDAYVPIIKIKFSGISIDLICAKLDIAQVPINLQLNDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPIIFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST ++++ EF+RG +I + N+ + W+ LF+ TFF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILKEFERGMKITNDIFSNK--LTWNDLFKKHTFFYDY 358
Query: 364 KNYLRIDISAENAD-DLRNWKGWVESRLRQLTLKIE 398
K YL I + + D D W G VES++R L LK+E
Sbjct: 359 KFYLTITTATKGTDEDHLKWSGLVESKVRLLILKLE 394
>gi|50557132|ref|XP_505974.1| YALI0F28039p [Yarrowia lipolytica]
gi|49651844|emb|CAG78786.1| YALI0F28039p [Yarrowia lipolytica CLIB122]
Length = 518
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/409 (46%), Positives = 271/409 (66%), Gaps = 5/409 (1%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GITEPIS A PT +++ +L + L+ +ES+ E+ R++VL + Q+ + +V+
Sbjct: 3 EQYGITEPISTAPPTPEEIALNGELIEELKRQGSFESEAESNKRKKVLLIMQQLAQEYVR 62
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S K +D + ++A KIFTFGSY LGVHGPG+DIDTL V P+H TRE DFF ++
Sbjct: 63 QVSLKKNFSDGMARDAGGKIFTFGSYSLGVHGPGSDIDTLIVVPKHVTRE-DFFEVFERL 121
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L E PE+ E+ VPDA VP++K KF G+SIDL+ ARL + +P DL + D++L+N D++
Sbjct: 122 LRERPELEEISAVPDAFVPIIKVKFMGISIDLISARLDIPKVPLDLTLEDDNLLRNVDDK 181
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+R+LNG RVTD ILRLVP F+ LR ++ WA+ R VY N+ GF GG+ W +LVAR+
Sbjct: 182 DLRALNGTRVTDDILRLVPNKTVFKHALRVIKIWAQNRAVYGNIMGFPGGVQWGILVARV 241
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV ++++SRFF V +WRWP PVLL IE+G L +VW+PR +DK H MPII
Sbjct: 242 CQLYPNAVAAVILSRFFNVLLRWRWPQPVLLKKIEDGPLQARVWNPRIYSQDKLHRMPII 301
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP M +++N++ ST ++++ E +RG +I + + W LFE FF YK Y
Sbjct: 302 TPAYPSMCATHNITASTQKVILRELERGGQILNEIMLGQK--PWSALFEKHHFFSDYKYY 359
Query: 367 LRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
L I +++ A+ W G+VES+LR L K+E L HP+ F
Sbjct: 360 LSIVAASKGTAEQQLKWSGFVESKLRHLVQKLELLDSIEL-AHPYVKTF 407
>gi|225677646|gb|EEH15930.1| Poly(A) polymerase PAPa [Paracoccidioides brasiliensis Pb03]
gi|226295198|gb|EEH50618.1| Poly(A) polymerase pla1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/418 (44%), Positives = 272/418 (65%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M +++ ++ G+T PIS A PT ++ L L+ N +ES E R++ L + ++
Sbjct: 1 MAAASVRQWGVTPPISTALPTPSEIAANDDLTTELKQQNNFESPSETERRKQTLHLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ + A KIFT+GSYRLGV+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDIAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L +M + +L PVPDA VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPLLEQMAPKGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL IEEG L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNQWNWPQPVLLKPIEEGPLQMKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D+YHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 300 DRYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQ--LTWNDLFTRH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF + YK YL I S+ + W G VES+LR L ++R + ++ HP P F
Sbjct: 358 TFFSQDYKYYLSITSSSRGKEAQSVWSGLVESKLRHLVGALDRKS-SIEVAHPFPKGF 414
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 424 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFV 482
+Y++GL+ K P G DI + FK + + +PG+ + + HV +LP V
Sbjct: 485 TYYIGLELKPLAP-GAARSLDISTDTQIFKSTCTSWPQYQPGINDLHITHVRNYDLPEDV 543
Query: 483 FPGG-VRPSRPSKGTWDSRRALERKVSSH 510
F G VRPSRP K T +K S H
Sbjct: 544 FQSGEVRPSRPKKKTLKKTEPTAQKRSIH 572
>gi|84999896|ref|XP_954669.1| polyA polymerase [Theileria annulata]
gi|65305664|emb|CAI73989.1| polyA polymerase, putative [Theileria annulata]
Length = 512
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/489 (39%), Positives = 301/489 (61%), Gaps = 20/489 (4%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
+ GIT+P+S GPT++D+ +R+L L+ NLYE+ E RE++L L+++++ +V++
Sbjct: 12 QYGITDPVSNEGPTNNDIKASRELLNLLKSYNLYETDEGKKRREDILESLNRLLQQFVRR 71
Query: 68 ISRA-KGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++ +GL DQ + + K+ TFGSYRLG+ P +DID LC+ PR TRE FF + +
Sbjct: 72 QAKINRGLTDQEASQVSGKLLTFGSYRLGIVAPDSDIDVLCLCPRSVTRES-FFSDFYNT 130
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
LT++ +++L PVPDA+ PV+K F +SID+L+A L + +++ D+IL+N ++
Sbjct: 131 LTKVEGISKLQPVPDAYTPVIKLYFYEISIDILFANLDAPTVSPHINVLDDNILRNMNDS 190
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRS+NGCRV IL VP FRTTLR ++ WA RR +YS V G+LGG+ WA+L AR+
Sbjct: 191 TVRSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARV 250
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYH 301
CQLYPN P+ L+ +FFRV++ W+W PV LC I+E G + +VWDPR NP+D++H
Sbjct: 251 CQLYPNCAPNQLIEKFFRVFSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHH 310
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMPIITPA+P MNS++NV+ +T +++ +E R EI + + ++ W+ + E F
Sbjct: 311 LMPIITPAFPSMNSTHNVTATTKKVITEELMRALEIFKTPNLSNLEL-WEKVLEEQDVFS 369
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH--PHPG--DFSDK 417
YK++L I++ W+GW+ SR+R L ++E N+ H P PG F D
Sbjct: 370 NYKHFLVIEVYGSTEHAHGKWEGWIGSRMRFLISRLE----NLGNTHIRPIPGFFKFEDD 425
Query: 418 SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQIS--VAHVT 474
+ S F + GV + DIR V+ FK ++ ++ + K QIS + H+
Sbjct: 426 NWDYASSAFFAFKVISGV-AENSKTLDIRSAVQSFKDIINNWSDMEKYRDQISFNIKHLK 484
Query: 475 RRNLPNFVF 483
LP++V
Sbjct: 485 NNQLPDYVL 493
>gi|302696569|ref|XP_003037963.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
gi|300111660|gb|EFJ03061.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
Length = 649
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/524 (38%), Positives = 304/524 (58%), Gaps = 43/524 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LGIT+PIS++ PT+ + T + + L ++ES E++ RE L R+ + K +V+K+
Sbjct: 10 LGITDPISVSPPTEAEEAATVAMMEELHRQGVFESAEDSKRRELALDRISALTKKFVQKV 69
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ A+GL++ + A K++TFGSYRLGVH P +DIDTLCV P+H +RE DFF ML
Sbjct: 70 TIARGLSEVTARNAGGKVYTFGSYRLGVHTPESDIDTLCVVPKHVSRE-DFFDVFEPMLR 128
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
E P+VTE+ +P+A+VP++K K G+ ID+L ARL+L IPEDL + +IL+N D++ V
Sbjct: 129 ESPDVTEVAGIPEAYVPIIKIKMFGIPIDILMARLALSSIPEDLSLQDSNILRNLDDRCV 188
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNG RVTD++LRLVP + FR LRC++ WA+R+ +YSNV GF GG+ WA+LVAR+CQ
Sbjct: 189 RSLNGYRVTDELLRLVPNVDVFRDALRCIKLWAQRKAIYSNVNGFPGGVAWAMLVARVCQ 248
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNA +V RFF + QW WP PV+L +++ +G + W+P+ P D+ H MP+ITP
Sbjct: 249 LYPNANAGTVVGRFFPIMHQWPWPAPVILKHVDDLQMGQRSWNPKLFPGDRAHRMPVITP 308
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
YP M +++NVS ST I+ +E +RG ++ ++ + W LFE FF Y+ +L+
Sbjct: 309 VYPAMCATHNVSVSTFAIIEEELRRGTKLMNSIILGSS--KWSELFEKHDFFHKYRYFLQ 366
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD------------ 416
I S +A+ W VE+++RQL K+E ++ HP F
Sbjct: 367 IIASTASAEAQLMWAPNVEAKIRQLVSKLEL-VESLTLAHPFTKGFEQVFYCMNDDEIRS 425
Query: 417 -----------------------KSKPLYCSYFMGLQRKQGVPVGE--GEQFDIRLTVKE 451
SK ++++GL + PVG + DI E
Sbjct: 426 VAQGEVPDVIARRRPQDIEGVESGSKVYSTTFYIGLA-IEPRPVGAIGTRRLDISYPTTE 484
Query: 452 FKQAVSMYT-LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 494
F + M+ + M + V H+ LP++VF G R R ++
Sbjct: 485 FTKVAKMWERFDEATMGLVVRHIKSSALPDYVFEPGERQPRSAQ 528
>gi|126139251|ref|XP_001386148.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
gi|126093430|gb|ABN68119.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 280/421 (66%), Gaps = 14/421 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T+PIS A PT + L LR +ES++ R EVL + ++V+ +V +S
Sbjct: 7 GVTDPISTANPTPKENSLNDALIGELRSRGSFESEQATKKRVEVLTQFQKMVQEFVFTVS 66
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ K ++D + ++A K+FTFGSYRLGV+GPG+D+DTL V P+H +RE DFF +++ +
Sbjct: 67 KKKNMSDGMAKDAGGKVFTFGSYRLGVYGPGSDLDTLVVVPQHVSRE-DFFTVFAEIIRK 125
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
PE+ E+ PVPDA VP++K ++ GV +DL++A L++ IP D+ + ++L+N DE+ +R
Sbjct: 126 RPELEEIVPVPDAFVPIIKIEYDGVPLDLIFACLNVPRIPLDMTLDDKNLLRNLDERDLR 185
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RVTD+IL+LVPK F+ LRC++ WA+++ VY NV GF GG+ WA+LVARICQL
Sbjct: 186 SLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQKAVYGNVFGFPGGVAWAMLVARICQL 245
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV +++V +FF +YT+W WP PVLL IE+G L ++VW+PR D+ H MP+ITPA
Sbjct: 246 YPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYANDRLHRMPVITPA 305
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP M +++N+++ST ++++ E ++G E+ + N W LF+ FF YK YL +
Sbjct: 306 YPSMCATHNITSSTQKVILSELEKGAEVVRQI--NLGKKSWSDLFDRHDFFHHYKFYLCV 363
Query: 370 DISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFM 427
++A A D + W G +ES+LR L LK+E T + HP+ DFSD SY +
Sbjct: 364 -VAATVASDEEHLKWTGLIESKLRHLVLKLEV-TEGVELAHPYVKDFSD-------SYVL 414
Query: 428 G 428
G
Sbjct: 415 G 415
>gi|324975502|gb|ADY62684.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/408 (44%), Positives = 274/408 (67%), Gaps = 5/408 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T P+S A PT ++ L + L+ +ES+ R EVL +V+ +V ++S
Sbjct: 6 GVTGPVSTADPTTKEISLNESLIQELKGRGSFESESATKKRAEVLSLFQTLVQQFVYEVS 65
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K ++D + ++A KIFTFGSYRLGV+GP +DID L V PRH TRE DFF +++ +
Sbjct: 66 ISKNMSDGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTTFDKIIRQ 124
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
E+ E++ V DA VP++K +F G+S+DL+ ARL++ +P D+ + ++L+N DE+ +R
Sbjct: 125 RSELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLR 184
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RVTD+IL+LVPK F+ LRC++ WA+ R VY NV GF GG+ WA+L ARICQL
Sbjct: 185 SLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQL 244
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV +++V +FF +YT+W WP PVLL AIE+G L ++VW+PR D+ H MP+ITPA
Sbjct: 245 YPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPA 304
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-R 368
YP M +++N+++ST ++++ E RG I +++ + E W LF FF Y+ YL
Sbjct: 305 YPSMCATHNITSSTQKVILQELTRGSNIMKSILEGEK--SWSDLFARHDFFHRYRFYLCV 362
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
+ ++E+A++ W G+VES+LRQL +K+E T + HP+ DFS+
Sbjct: 363 VAATSESAEEHHKWHGFVESKLRQLVIKLES-TEGVELAHPYVKDFSN 409
>gi|255723652|ref|XP_002546758.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
gi|240130534|gb|EER30100.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
Length = 557
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/413 (45%), Positives = 273/413 (66%), Gaps = 5/413 (1%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
+ Q G+T PIS+A PT + L K L+ +ES+ R EVL L ++ + +
Sbjct: 2 SNQTFGVTPPISVANPTAKENELNDLLIKELKQRGSFESETATKKRVEVLNILQKMTEDF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V K+S K +++ + ++A KIFTFGSYRLGV+GPG+DIDTL V P+H TR DFF +
Sbjct: 62 VFKVSIKKNMSEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLIVVPKHVTRN-DFFETFY 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L E+ E+ PVPDA VP++K +F+G+SIDL++ARL + + DL + ++L+N D
Sbjct: 121 ELLKTRDELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVSRDLTLDDKNLLKNID 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +R+LNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LVA
Sbjct: 181 EKDLRALNGTRVTDEILTLVPKQTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV ++++ +FF +Y+QW WP PVLL IE+G L ++VW+P+ D+ H MP
Sbjct: 241 RICQLYPNAVSAVIIEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPKLYAPDRQHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N+++ST ++++ EFQRG EI + N W LFE FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILSEFQRGIEIMNGI--NSGSKTWSDLFERHDFFFRYK 358
Query: 365 NYLRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
YL I + + N+++ + G VES+LR L K+E + HP+ F D
Sbjct: 359 FYLCIVAATKSNSEEHLKYGGMVESKLRLLVQKLEL-VEGIELAHPYVKTFED 410
>gi|193573537|ref|XP_001946233.1| PREDICTED: poly(A) polymerase gamma-like [Acyrthosiphon pisum]
Length = 640
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/541 (39%), Positives = 311/541 (57%), Gaps = 34/541 (6%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T IS A PTD D+ T+ L+ L + + E+ R EVL L+ + K W++++S
Sbjct: 3 GMTSAISDALPTDIDIQLTKSLDDALSREKVITTDEDLSQRLEVLSMLNNLAKEWIREVS 62
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ L + + + TFGSYRLGV+ GADID + + PRH TR D+F + L E
Sbjct: 63 MERNLPEITAENVGGLVCTFGSYRLGVYHKGADIDAIVIVPRHITRT-DYFATFYNKLKE 121
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
P + + V +A VPV+K G+ ID+L+ARL+L + ED D+ QD +L+N + + VR
Sbjct: 122 NPSINNVRAVEEAFVPVIKMIIQGIEIDMLFARLALKEVHEDTDLQQDDLLRNLNPKCVR 181
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD ILRLVP ++F+ TL ++ WAKR VYSN G+LGG++WA+LVAR+CQL
Sbjct: 182 SLNGCRVTDSILRLVPNRESFKKTLIAIKLWAKRHRVYSNALGYLGGVSWAMLVARVCQL 241
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA P+ L+ +FF ++++W+WP PVLL LG VWDPR N D+ H+MPIITP
Sbjct: 242 YPNAAPATLIHKFFLIFSKWQWPQPVLLKPSYFMDLGYPVWDPRVNMADRNHVMPIITPV 301
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP NS++NVS STL I+ DEF+ +I + E+ W +F+P FF Y+ +L I
Sbjct: 302 YPQQNSTFNVSHSTLAIIQDEFKTSLDIMGEILTGES--SWSKIFQPSKFFTKYRYFLAI 359
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQC----HPHPGDFS---DKSKPLY 422
+ A ++L W+G VESRLR L +E ++C H +P F DKS+
Sbjct: 360 TVFANCDEELLEWRGLVESRLRFLPTSLEE-----IECVQRSHLNPDQFVLPYDKSQGRP 414
Query: 423 CS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLP 479
S +F+GL+ + G D +++F V +T+ K GM I V H+ R++L
Sbjct: 415 SSVWFVGLEISKS--NGTVVNLDFSTHIRDFCLLVKSRAHTIFKAGMDIQVNHLKRKDLR 472
Query: 480 NFV---------FPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKR---KQTDDN 527
++V P V ++ + + R ++ V K + RKR +TDDN
Sbjct: 473 DYVPDELKKEKAIPNTVGSKIIARLSTEGRHSVSELVEESQK--SPTSRKRGIEDETDDN 530
Query: 528 V 528
+
Sbjct: 531 I 531
>gi|448086239|ref|XP_004196053.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359377475|emb|CCE85858.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/411 (45%), Positives = 268/411 (65%), Gaps = 5/411 (1%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N G+T PIS A PT + L + L+ +ES+ R EVL L ++ + +
Sbjct: 2 NHHNYGVTPPISTANPTAKENSLNDSLIRELKARGSFESEAATRKRVEVLNELQKMAEKF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V ++S K ++D + ++A KIFTFGSYRLGV+GPG+DID L V P+H TR DFF
Sbjct: 62 VYEVSLQKNMSDGMARDAGGKIFTFGSYRLGVYGPGSDIDALVVVPKHVTRN-DFFEVFE 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L E E+ E+ VPDA+VP++K +G+SIDL++ARL + +P+DL + ++L+N D
Sbjct: 121 KILRERKELEEIAAVPDAYVPIIKMVLNGISIDLIFARLDVPKVPKDLKLDDKNLLRNID 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LVA
Sbjct: 181 EKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV +++V +FF +Y QW WP PVLL IE+G L ++VW+PR P D+ H MP
Sbjct: 241 RICQLYPNAVSAVVVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N+++ST +I+M EF+RG +I + N W L TFF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKIIMKEFRRGIDIMNQISGNNK--TWANLLARHTFFHNYK 358
Query: 365 NYLRIDISAENA-DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
YL I + + + ++ W G VESRLR L K+E T + HP+ F
Sbjct: 359 FYLCIVAATKGSYEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPYVKTF 408
>gi|358370159|dbj|GAA86771.1| poly(A) polymerase Pap [Aspergillus kawachii IFO 4308]
Length = 598
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/418 (44%), Positives = 271/418 (64%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ G+T PIS PT D+L L L+ N +ES E R++VL + ++
Sbjct: 1 MAAPPVRQWGVTPPISTVLPTPDELAANDDLITELKVQNNFESPAETERRKQVLQLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ ++ A KIFT+GSYRLGV+GPG+DIDTL VGP+H + DFF
Sbjct: 61 TVEFVKTVSRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVIID-DFF 119
Query: 121 GELHQMLTEMPE---VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L +M + ++ PVPDA+VP++K + SG+SIDL++ARL + IP +LD+ +
Sbjct: 120 SDFPPILEKMAAPGAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPMNLDLKNN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E QRG +I + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQ--LRWEDLFARH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF + YK YL I S+ + W G VES++R L ++R + HP P F
Sbjct: 358 TFFTKDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDRKA-TIAIAHPFPKGF 414
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 423 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNF 481
+Y++GL+ K P G DI + FK + + +PG+ +++ HV +LP
Sbjct: 484 TTYYIGLELKPLEP-GASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHVRNFDLPED 542
Query: 482 VF-PGGVRPSRPSK 494
VF PG RP+RP K
Sbjct: 543 VFQPGETRPTRPKK 556
>gi|320583027|gb|EFW97243.1| poly(A) polymerase isozyme [Ogataea parapolymorpha DL-1]
Length = 1547
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/413 (44%), Positives = 276/413 (66%), Gaps = 5/413 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
+ ++ G+T PIS AGPT + + + LR+ N +ES+ E R EVL L ++ +
Sbjct: 963 TTTKQYGVTAPISTAGPTAKENELNDAMIEELRNQNSFESESETQKRREVLATLQKLTEE 1022
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V +SR K +++ + ++A KIFTFGSYRLGV+GPG+DIDTL V P+H TR+ DFF
Sbjct: 1023 FVYTVSRRKNMSEGMARDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFTVF 1081
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
++L + PE+ ++ PVPDA +P++K F GV IDL+ RL + + DL + +++L+N
Sbjct: 1082 EELLRKRPELNKIQPVPDAFMPIIKTVFDGVDIDLICGRLDIPQVSLDLTLEDNNLLRNI 1141
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D++ +R+LNG RVTDQIL+LVP+ FR LR ++ WA+RR +Y+N+ GF GG+ WA+LV
Sbjct: 1142 DDRDLRALNGTRVTDQILQLVPQKMVFRHALRTIKLWAQRRAIYANMFGFPGGVAWAMLV 1201
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNAV +++VS+FF++Y QW+WP PVLL IE+G L +++W+P+ +D+ H M
Sbjct: 1202 ARICQLYPNAVGAVIVSKFFQIYLQWKWPQPVLLKPIEDGPLPVRIWNPKLYGQDRLHRM 1261
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST +I++ E QRG EI ++ + W LF FF AY
Sbjct: 1262 PVITPAYPSMCATHNITASTQKIILKEMQRGLEIMNDIQFGKR--TWKDLFAKHDFFFAY 1319
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
K YL + + ++ + W G VES+LR L K+E ++ HP+ FS
Sbjct: 1320 KFYLTVITATRDSYEAHLKWSGMVESKLRLLVQKLEV-VNGIVLAHPYVKPFS 1371
>gi|242773312|ref|XP_002478214.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
gi|218721833|gb|EED21251.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/418 (44%), Positives = 271/418 (64%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ G+T PIS+ PT ++L L L+ N +E E R++ L + ++
Sbjct: 1 MAAQPTRQWGVTPPISMNLPTPEELAANDDLIAELKAQNNFELPAETERRQQTLQLIQKV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
V +VK + R KGL+ +L+ A KIFT+GSYRLGV+GPG+DIDTL V P+H + DFF
Sbjct: 61 VIEFVKTVGRRKGLSPAVLEAAGGKIFTYGSYRLGVYGPGSDIDTLIVAPKHVLID-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L M + ++ PVPDA VP++K +FSG+S+DL++ARL L IP +LD+ +
Sbjct: 120 SDFPPILERMSPPGAIEKMTPVPDAFVPIIKLEFSGISLDLIFARLILPSIPLNLDLKNN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
L+ D++ VRSLNG RVTDQIL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDDKEVRSLNGTRVTDQILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ T+W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHT 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++N+S ST +++ E QRG +I + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNISLSTKAVILRELQRGGDIVDKIFAKQ--LTWNDLFTRH 357
Query: 358 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF YK YL+I S++ + W G VES+LR L ++R + HP P F
Sbjct: 358 TFFSKDYKYYLQITASSKTKEADSVWSGLVESKLRHLVGALDRKNI-IAVAHPFPKGF 414
>gi|119494846|ref|XP_001264225.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
gi|119412387|gb|EAW22328.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
Length = 603
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/558 (37%), Positives = 310/558 (55%), Gaps = 71/558 (12%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ G+T PIS A PT ++L L L+ N +ES E R++VL + ++
Sbjct: 1 MSTPPVRQWGVTPPISTALPTSEELAANDDLISELKAQNNFESPAETERRKQVLQLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ ++ A KIFT+GSYRLGV+GPG+DIDTL VGP+H + DFF
Sbjct: 61 THEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLID-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L +M + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ +
Sbjct: 120 SDFPPVLEKMAPPGAIEKMTPVPDAFVPIIKLELSGISIDLIFARLIVSSVPLNLDLKNN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP+A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++N+S ST +++ E QRG +I + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQ--LTWNDLFARH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-- 414
+FF + YK YL I S+ + W G VES++R L ++R + HP P F
Sbjct: 358 SFFTQDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKP-TIAVAHPFPKGFER 416
Query: 415 -------------------------------SDKSKPLYCSYFMGLQRKQGVPVGE---- 439
K + G++ + PVGE
Sbjct: 417 VHIVSNEEEAEAVKNGSTKYQDKGTKTETTDERKDAAHQAAALSGVENAEVEPVGEKSAN 476
Query: 440 ------------------------GEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVT 474
DI + FK + + +PG+ +S+ HV
Sbjct: 477 GDSHIIYTTTYYIGLELKPLEPGASRSLDISTDAQIFKSTCTSWAGYQPGINDLSITHVR 536
Query: 475 RRNLPNFVF-PGGVRPSR 491
+LP+ VF PG RP+R
Sbjct: 537 NFDLPDDVFQPGETRPTR 554
>gi|402890991|ref|XP_003908748.1| PREDICTED: poly(A) polymerase gamma [Papio anubis]
Length = 700
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/485 (41%), Positives = 278/485 (57%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+S +K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L + L V DA VPV+KF+F G+ +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEVR----------------------------- 166
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
CRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 167 -------CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 219
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 220 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 279
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 280 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 337
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 421
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 338 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 396
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 477
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 397 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 455
Query: 478 LPNFV 482
L +++
Sbjct: 456 LHHYL 460
>gi|146416103|ref|XP_001484021.1| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/411 (45%), Positives = 268/411 (65%), Gaps = 5/411 (1%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
Q G+T PIS A PT + L K LR +E++ R EVL L +I + +V
Sbjct: 4 QTYGVTPPISTAEPTSKEKSLNDSLIKELRKRGSFENEAATKKRVEVLNTLQKITEEFVY 63
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S K +++ + ++A KIFT+GSYRLGV+GPG+DIDTL V P+H R DFF +
Sbjct: 64 RVSLNKNMSEGMARDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVNRT-DFFTVFESL 122
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L E PE+ E+ VPDA VP++K +F G+SIDL+ A+L + +P DL + ++L+N DE+
Sbjct: 123 LRERPELEEIASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEK 182
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+N+ GF GG+ WA+L ARI
Sbjct: 183 DLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARI 242
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR P D+ H MP+I
Sbjct: 243 CQLYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRLHRMPVI 302
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP M +++N+++ST I++ EF+RG EI + + +W LF FF YK Y
Sbjct: 303 TPAYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKK--EWGDLFARHEFFFRYKFY 360
Query: 367 LRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
L + S + +A++ W G VES+LR L K+E T + HP+ F D
Sbjct: 361 LCVVASTKGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|190347092|gb|EDK39304.2| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/411 (45%), Positives = 268/411 (65%), Gaps = 5/411 (1%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
Q G+T PIS A PT + L K LR +E++ R EVL L +I + +V
Sbjct: 4 QTYGVTPPISTAEPTSKEKSLNDSLIKELRKRGSFENEAATKKRVEVLNTLQKITEEFVY 63
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S K +++ + ++A KIFT+GSYRLGV+GPG+DIDTL V P+H R DFF +
Sbjct: 64 RVSLNKNMSEGMARDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVNRT-DFFTVFESL 122
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L E PE+ E+ VPDA VP++K +F G+SIDL+ A+L + +P DL + ++L+N DE+
Sbjct: 123 LRERPELEEIASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEK 182
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+N+ GF GG+ WA+L ARI
Sbjct: 183 DLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARI 242
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
CQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR P D+ H MP+I
Sbjct: 243 CQLYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRSHRMPVI 302
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPAYP M +++N+++ST I++ EF+RG EI + + +W LF FF YK Y
Sbjct: 303 TPAYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKK--EWGDLFARHEFFFRYKFY 360
Query: 367 LRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
L + S + +A++ W G VES+LR L K+E T + HP+ F D
Sbjct: 361 LCVVASTKGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|313243939|emb|CBY14824.1| unnamed protein product [Oikopleura dioica]
Length = 630
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 310/544 (56%), Gaps = 23/544 (4%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
GIT +S+ GPT+ D + T L+K + +++ + R +VL +L+++VK +V+K+
Sbjct: 2 FGITSALSVEGPTEKDKVMTEDLQKTIEPYGAFDTPDGLSHRIQVLTKLNELVKDFVRKV 61
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
++ L + L E KI+TFGSYRLGVH DIDTLCV P+H TR FF ML
Sbjct: 62 AKECRLPEHLHGELGGKIYTFGSYRLGVHTSDGDIDTLCVVPQHVTRHH-FFTIFLDMLK 120
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSL-WVIPEDLDISQDSILQNADEQT 187
+ VTE + +A VP++K F G+ +D+L+ARL+ +PED D+ IL+N +E+
Sbjct: 121 KTEGVTECRDIREAFVPLIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLEEKC 180
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
VRSLNGCRVTD+IL LVP I+ FR TLR ++ WA+R+G+Y N GF+GG+ WA+LVAR C
Sbjct: 181 VRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVARTC 240
Query: 248 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPI 305
QLYPNA PS L+ +FF ++++W WP PV L E+ G VWDPR NP D+ HLMPI
Sbjct: 241 QLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRFNPLDRSHLMPI 300
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD------WDTLFEPFTF 359
ITPAYP NS++NVS STL +M E + +E + + + + D W LF F
Sbjct: 301 ITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTRLWADLFTRTDF 360
Query: 360 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----- 414
F YK+++ + +A+ + + W G VES +R+L +ER+ Y +L H +
Sbjct: 361 FNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEY-ILIAHVNVDSIELDPA 419
Query: 415 SDKSKPLY-CSYFMGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAH 472
+ P Y C +F+GL + V DI+ QA + P M++ +
Sbjct: 420 EEGQSPRYVCRWFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAAISHNNYTPDMRVEARY 479
Query: 473 VTRRNLPNFVFPGGVRPSRPSKGT--WDSRRALERKVSSHTKPGADDGRKRKQTDDN--- 527
V R NL F+ P R + SK S+ + + + +TK + K Q+ +N
Sbjct: 480 VKRHNLVKFLTPELARTLKLSKSKEGRKSKTNAQNQSNGNTKKAEESESKNSQSKENKEK 539
Query: 528 VDTH 531
++TH
Sbjct: 540 LETH 543
>gi|448081751|ref|XP_004194965.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359376387|emb|CCE86969.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/571 (38%), Positives = 317/571 (55%), Gaps = 63/571 (11%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N G+T PIS A PT + L + L+ +ES+ R EVL L ++ + +
Sbjct: 2 NHHNYGVTPPISTANPTAKENSLNDSLIRELKARGSFESEAATRKRVEVLNELQKMAERF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V ++S K ++D + ++A KIFTFGSYRLGV+GPG+DID L V P+H TR DFF
Sbjct: 62 VYEVSLQKNMSDGMARDAGGKIFTFGSYRLGVYGPGSDIDALVVVPKHVTRN-DFFEVFE 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L E ++ E+ VPDA+VP++K +G+SIDL++ARL + +P+DL + ++L+N D
Sbjct: 121 KILRERKDLEEIAAVPDAYVPIIKMILNGISIDLIFARLDVPKVPKDLKLDDKNLLRNID 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LVA
Sbjct: 181 EKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV +++V +FF +Y QW WP PVLL IE+G L ++VW+PR P D+ H MP
Sbjct: 241 RICQLYPNAVSAVIVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N+++ST +I+M EF+RG +I + N W L TFF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKIIMKEFRRGIDIMNQINGNNK--TWANLLARHTFFHNYK 358
Query: 365 NYLRIDISAENA-DDLRNWKGWVESRLRQL------------------------------ 393
YL I + + ++ W G VESRLR L
Sbjct: 359 FYLCIVAATKGPYEEHIKWSGMVESRLRILVQKLELTEGIELAHPYVKTFEHSFSSNDSE 418
Query: 394 ----------TLKIERHTYNMLQCHPHPG---DFSDKSKPLYCSYFMGLQRKQGVPVGEG 440
TL+ E+ T ++ Q P D SD K F+GL+ + G
Sbjct: 419 KIQEVINTYGTLQGEKLTKDVTQIDPQSKESEDSSDNIKVHLTKLFIGLE--IDLNKGGE 476
Query: 441 EQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDS 499
++ DI+ EF + + + + HV +LPN V+ G R RP K +
Sbjct: 477 KKLDIQYPCSEFFNICKSWQSYDEKLHSVQIKHVKLYDLPNDVYVEGER--RPVKTS--K 532
Query: 500 RRALERKVSSHTKPGADDGRKRKQTDDNVDT 530
RR L K DD +KR ++ V T
Sbjct: 533 RRKLAVK---------DDDKKRPKSVGAVAT 554
>gi|212531585|ref|XP_002145949.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
gi|210071313|gb|EEA25402.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
Length = 599
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/418 (44%), Positives = 270/418 (64%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ G+T PIS+ PT ++L L L+ N +E E R++ L + ++
Sbjct: 1 MAAQATRQWGVTPPISMNLPTPEELAANDDLIAELKAQNNFELPSETERRQQTLQLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
V +VK + R KGL+ L+ A KIFT+GSYRLGV+GPG+DIDTL V P+H + DFF
Sbjct: 61 VIEFVKTVGRRKGLSPAALEAAGGKIFTYGSYRLGVYGPGSDIDTLIVAPKHVMID-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L M + ++ PVPDA VP++K +FSG+SIDL++ARL L +P +LD+ +
Sbjct: 120 SDFPPILERMSPPGAIEKMTPVPDAFVPIIKLEFSGISIDLIFARLILPSVPLNLDLKNN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
L+ D++ VRSLNG RVTDQIL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDDKEVRSLNGTRVTDQILELVPQQKTFRIALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ T+W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++N+S ST +++ E QRG ++ + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNISLSTKAVILRELQRGGDMVDKIFAKQ--LTWNDLFTRH 357
Query: 358 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF YK YL+I S++ + W G VES+LR L ++R + HP P F
Sbjct: 358 TFFSKDYKYYLQITASSKTKEAESVWSGLVESKLRHLVGALDRKNIIAI-AHPFPKGF 414
>gi|156342919|ref|XP_001620975.1| hypothetical protein NEMVEDRAFT_v1g176602 [Nematostella vectensis]
gi|156206500|gb|EDO28875.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/481 (43%), Positives = 295/481 (61%), Gaps = 13/481 (2%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
GS+ Q+ G+T IS AGP DL T++LE+ L ++ES++E R VL +L+++
Sbjct: 8 GSNPPQKSFGVTSAISHAGPKPRDLELTKRLEEALIPYGVFESEDELQQRMIVLAKLNEL 67
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK W+ ++S K + + + + KIFTFGS+ LGVH GAD TL V P H R DFF
Sbjct: 68 VKEWIVEVSIKKKMPENVAKTVGGKIFTFGSFILGVHTKGAD--TLLVAPHHIDRA-DFF 124
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
+ +L P+V EL V +A VPV+K F + +DLL+ARL+ IP++LD+ +++L
Sbjct: 125 SSFYDLLKNHPDVRELRAVENAFVPVIKLIFCDIEVDLLFARLASPEIPDNLDLLDENLL 184
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+N D + VRSLNGCRVTD+ILR VP I++FR TL ++ WAK+ GVYSNV GFLGG++WA
Sbjct: 185 KNLDPKCVRSLNGCRVTDEILRQVPNIESFRLTLNAVKLWAKKHGVYSNVLGFLGGVSWA 244
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI---EEGSLGLQVWDPRRNPK 297
+LVAR CQLYPNA S L+ +FF V+++W WPNPVLL I E LG + WDPR NP
Sbjct: 245 MLVARTCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFKNWDPRTNPG 304
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D+YHLMPIITPAYP NS++NVS ST +IM DEF G + E + +A +WD LF P
Sbjct: 305 DRYHLMPIITPAYPQQNSTFNVSMSTRKIMCDEFFIGLKNTEDVISGKA--NWDRLFTPP 362
Query: 358 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP---GDF 414
FF Y++Y+ + S+ ++ W G VES++R L +E + Y L H +P G
Sbjct: 363 NFFHKYRHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSYGPL 421
Query: 415 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 474
+ + +F+GL ++ V ++I++ + + K GM HV
Sbjct: 422 DSEGEKHVTRWFIGLMFEKLENVNINLTYEIQMFKNKVHAQAVKIMMFKEGMVTEAKHVR 481
Query: 475 R 475
R
Sbjct: 482 R 482
>gi|70996294|ref|XP_752902.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|66850537|gb|EAL90864.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|159131656|gb|EDP56769.1| poly(A) polymerase Pap [Aspergillus fumigatus A1163]
Length = 580
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/538 (39%), Positives = 309/538 (57%), Gaps = 54/538 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ G+T PIS A PT ++L L L+ N +ES E R++VL L ++
Sbjct: 1 MSTPPVRQWGVTPPISTALPTPEELAANDDLISELKAQNNFESPAETERRKQVLQLLQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ ++ A KIFT+GSYRLGV+GPG+DIDTL VGP+H + DFF
Sbjct: 61 THEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLID-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L +M + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ +
Sbjct: 120 SDFPPVLEKMAPPGAIEKMTPVPDAFVPIIKLELSGISIDLIFARLIVSSVPLNLDLKNN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP+A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++N+S ST +++ E QRG +I + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQ--LTWNDLFARH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-- 414
+FF + YK YL I S+ + W G VES++R L ++R + HP P F
Sbjct: 358 SFFTQDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKP-TIAVAHPFPKGFER 416
Query: 415 -------------------------------SDKSKPLYCSYFMGLQRKQGVPVGE---- 439
K + G++ + PVGE
Sbjct: 417 VHIVSNEEEAEAVKNGSTKYQDKGTKTETTDERKDAAHQAAALSGVENAEVEPVGEKSVN 476
Query: 440 GEQFDIRLTVK----EFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSR 491
G+ I T E K Y +PG+ +S+ HV +LP+ VF PG RP R
Sbjct: 477 GDSHIIYTTTYYIGLELKPLEPGY---QPGINDLSITHVRNFDLPDDVFQPGETRPMR 531
>gi|50292873|ref|XP_448869.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528182|emb|CAG61839.1| unnamed protein product [Candida glabrata]
Length = 569
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/396 (45%), Positives = 269/396 (67%), Gaps = 5/396 (1%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
N Q++ GIT P+S+AGPT + +L + L+ N +ES++E +R +VL L ++ +
Sbjct: 2 NYQKVYGITGPVSIAGPTAAENKLNDELIQELKKENSFESEQETANRVKVLKTLQELTEK 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ A+L + + L + ++L+N
Sbjct: 121 DALLREREELDEIAPVPDAFVPIIKLKFSGISIDLICAKLDIAQVKPSLTLDDKALLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR +Y+NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPSVFRIALRAIKIWAQRRAIYANVFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILSEWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST +++ E RG ++ + + W LF FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKAVILKELNRGIQVTNDIFAYKK--TWADLFTKHDFFFQY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL I + D+ W G VES+LR LTLK+E
Sbjct: 359 KYYLTITAATRGDDEEHLKWSGLVESKLRLLTLKLE 394
>gi|327357099|gb|EGE85956.1| Poly(A) polymerase PAPa [Ajellomyces dermatitidis ATCC 18188]
Length = 599
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/418 (44%), Positives = 271/418 (64%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M ++ ++ G+T P+S A PT ++ L L+ N +E+ E R++ L + ++
Sbjct: 1 MAAAPVRQWGVTPPVSNALPTPAEIAANEDLTAELKRQNNFEAPAETERRKQTLQLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ + A KIFT+GSYRLGV+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L M + +L PVPDA VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPVLENMAPLGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
DKYHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 300 DKYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQ--LTWNDLFTRH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF + YK YL I ++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 358 TFFSQDYKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 424 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFV 482
+Y++GL+ K VP G DI FK + + +PG+ I++ HV +LP+ V
Sbjct: 485 TYYIGLEVKPLVP-GAARSLDISADTHIFKSTCTSWPQYQPGINDINITHVRNYDLPDDV 543
Query: 483 F-PGGVRPSRPSKGTWDSRRALERKVSSH 510
F PG VRPSRP K A +K H
Sbjct: 544 FQPGEVRPSRPKKKVVKKSEATAQKRRIH 572
>gi|261191352|ref|XP_002622084.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239589850|gb|EEQ72493.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239612743|gb|EEQ89730.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis ER-3]
Length = 599
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/418 (44%), Positives = 271/418 (64%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M ++ ++ G+T P+S A PT ++ L L+ N +E+ E R++ L + ++
Sbjct: 1 MAAAPVRQWGVTPPVSNALPTPAEIAANEDLTAELKRQNNFEAPAETERRKQTLQLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ + A KIFT+GSYRLGV+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L M + +L PVPDA VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPVLENMAPLGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
DKYHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 300 DKYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQ--LTWNDLFTRH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF + YK YL I ++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 358 TFFSQDYKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 424 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFV 482
+Y++GL+ K VP G DI FK + + +PG+ I++ HV +LP+ V
Sbjct: 485 TYYIGLEVKPLVP-GAARSLDISADTHIFKSTCTSWPQYQPGINDINITHVRNYDLPDDV 543
Query: 483 F-PGGVRPSRPSKGTWDSRRALERKVSSH 510
F PG VRPSRP K A +K S H
Sbjct: 544 FQPGEVRPSRPKKKVVKKSEATAQKRSIH 572
>gi|412986520|emb|CCO14946.1| predicted protein [Bathycoccus prasinos]
Length = 632
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/488 (39%), Positives = 288/488 (59%), Gaps = 30/488 (6%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEAN 83
D+ RT++L+ L+ ++YESQ E REEVLG L+++++ W++ S +KG D+ ++
Sbjct: 26 DIKRTKELDSLLKLEDVYESQSECTRREEVLGELNEMLQDWIRTRSLSKGHPDESIR--- 82
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG--------ELHQMLTEMPEVTE 135
++TFGSYRLGVHGP ADID+L +GP+H R EDFFG + + + +
Sbjct: 83 CNLYTFGSYRLGVHGPAADIDSLVIGPKHIDRAEDFFGFEEDDFEGSFYDYMRKHEGTEK 142
Query: 136 LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGC 194
+ VPDA VP +K +F G ID+ Y L + +P DLD+ IL D+ V+SL GC
Sbjct: 143 IVAVPDAVVPELKTEFRGFEIDVAYCSLPGYSNVPLDLDVLSAKILHGLDDAGVKSLAGC 202
Query: 195 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 254
RV D +L+LV +R LR +R WA RRGVYSNV GF GG+N A+LVAR+CQLYPNA
Sbjct: 203 RVADSLLKLVTNHSEYRIALRALRLWAARRGVYSNVVGFFGGVNLAILVARVCQLYPNAS 262
Query: 255 PSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAY 310
SMLV FF+++ W W PV+L +++ + GL+ WD R N ++Y LM IITPAY
Sbjct: 263 ASMLVYSFFQIWDNWVWTTPVMLTSLDIAPKDQIPGLRHWDERVNKPERYQLMKIITPAY 322
Query: 311 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 370
P NS++NVS+STL ++ EF+RG + + EA W ++ FF YK YL++
Sbjct: 323 PAQNSTFNVSSSTLEVLKREFKRGKIVTGKVLIGEA--KWTDVWSDVQFFAKYKTYLQLI 380
Query: 371 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD--KSKPLYCSYFMG 428
++A+N +D + W+GWV SRL+ L +E + + HP F D K K ++C+ F G
Sbjct: 381 VTADNEEDFKKWEGWVGSRLKNLVQGVETFSEGAMMAHPGVKKFYDPEKDKEVHCNVFFG 440
Query: 429 LQRKQGVPVG---EGEQFDIRLTVKEFKQAVSMYTLR-------KPGMQISVAHVTRRNL 478
L G E ++ ++ ++ F+ V Y R KPGM + + + ++++
Sbjct: 441 LFPNPSTTSGDAREKKKINLNPAIENFQMTVGNYIDRATGSVNWKPGMGVQIKLLRKKDI 500
Query: 479 PNFVFPGG 486
P++ P G
Sbjct: 501 PSWALPEG 508
>gi|115397689|ref|XP_001214436.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
gi|114192627|gb|EAU34327.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
Length = 599
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/418 (44%), Positives = 271/418 (64%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ G+T PIS PT D+L L L+ N +ES E R+EVL L ++
Sbjct: 1 MATPPVRQWGVTPPISTVLPTPDELAANDDLIAELKRQNNFESPAETEQRKEVLKLLQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL++ ++ A KIFT+GSYRLGV+GPG+DIDTL VGP+ + DFF
Sbjct: 61 TIEFVKVVSRKKGLSEAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKQVLID-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L M + ++ PVPDA+VP++K + SG+SIDL++ARL + IP +LD+ +
Sbjct: 120 SDFPPVLERMAPPGAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPINLDLKNN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E QRG ++ + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKNVILRELQRGGDMVDKIFMKQ--LTWNDLFARH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
+FF + YK YLRI ++ + W G VES++R L ++R + HP P F
Sbjct: 358 SFFTKDYKYYLRITAASTTKEADSVWSGLVESKIRHLVGALDRKP-TIAVAHPFPKGF 414
>gi|296415646|ref|XP_002837497.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633369|emb|CAZ81688.1| unnamed protein product [Tuber melanosporum]
Length = 587
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/395 (46%), Positives = 264/395 (66%), Gaps = 6/395 (1%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
Q+ G+T PIS+A PTD ++ R + L + L+ +E EE+ R VL L + + +VK
Sbjct: 7 QQYGVTPPISVATPTDKEVERNQALIEELKKQGSFEGAEESQKRVLVLNTLQNLTEGFVK 66
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
K+ KG+ + +++ + KIFT+GSYRLGV+ PG+DIDTL V P H TR DFF L M
Sbjct: 67 KVCANKGMPEHIIKNSGGKIFTYGSYRLGVYAPGSDIDTLLVTPAHITRH-DFFATLPAM 125
Query: 127 LTEM-PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQDSILQNAD 184
L E+ P +L VPDA VP++KFK +SIDL++ARL+ + +P+D+ +S +L+ D
Sbjct: 126 LQELVPPPEDLSMVPDAFVPIIKFKLQSISIDLIFARLANVNSVPKDMALSDKELLRGCD 185
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E +R LNG RVTD+IL LVPK FR LR ++ WA+RR +Y+NV GF GG+ WA+LVA
Sbjct: 186 EVNLRCLNGTRVTDEILTLVPKPGVFRMALRGIKLWAQRRAIYANVMGFPGGVAWAMLVA 245
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYP AV ++++S+FF++ W WP PVLL IE+G L ++VW+P+ P D+ HLMP
Sbjct: 246 RICQLYPMAVSAVVISKFFKILAHWTWPQPVLLKGIEDGPLSVRVWNPKIYPSDRGHLMP 305
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAY 363
IITPAYP M +++N++ ST I++ E + EI + + ++ WD LFE +FF Y
Sbjct: 306 IITPAYPSMCATHNITKSTKSIIIREMKHAAEIMDGIMV--GNLSWDKLFERHSFFTNGY 363
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 398
+ YL + +A++ D L W G VES+LR L +K+E
Sbjct: 364 RYYLSVVAAAKDKDTLLGWSGLVESKLRHLVMKLE 398
>gi|448531596|ref|XP_003870285.1| Pap1 poly(A) polymerase [Candida orthopsilosis Co 90-125]
gi|380354639|emb|CCG24155.1| Pap1 poly(A) polymerase [Candida orthopsilosis]
Length = 557
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/420 (45%), Positives = 272/420 (64%), Gaps = 8/420 (1%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N Q G+T PISL PT D L K L+ YES+ + R EVL L ++ + +
Sbjct: 7 NNQTYGVTPPISLTDPTSKDKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDF 66
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V ++S K + + ++A KIFTFGSYRLGV+GP +DID L V PRH TRE DFF
Sbjct: 67 VYEVSLRKNMTQGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTVFE 125
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L PE+ E++ V +A VP++K +F+G+SIDLL+A+L + +P DL + ++L+N D
Sbjct: 126 KILRGRPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNID 185
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +R+LNG RVTD+ILRLVPK F+ LR ++ WA++R VY+NV GF GG+ WA+LVA
Sbjct: 186 EKDMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVA 245
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV ++++ +FF++Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 246 RICQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMP 305
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N++ ST +I+M+EF RG EI + + W L E +FF YK
Sbjct: 306 VITPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQK--VWSHLLERHSFFHQYK 363
Query: 365 NYL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 423
YL + + NA++ + G VES+LR L K+E+ + HP+ F + YC
Sbjct: 364 FYLCVVAATKSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPYVKSFEN---AYYC 419
>gi|225561454|gb|EEH09734.1| poly(A) polymerase Pap [Ajellomyces capsulatus G186AR]
Length = 600
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/418 (44%), Positives = 271/418 (64%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M ++ ++ G+T P+S A PT ++ L L+ N +E+ E R++ L + ++
Sbjct: 1 MAAAPTRQWGVTPPVSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ + A KIFT+GSYRLGV+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L M + +L VPDA+VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPILENMAPKGAIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPPNLDLRNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSAVVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
DKYHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 300 DKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQ--LSWNDLFTRH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF + YK YL I ++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 358 TFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 410 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 467
HP DK LY + Y++GL+ K VP G DI FK + + +PG+
Sbjct: 472 HPN--GDKGCTLYTTTYYIGLELKPLVP-GASRSLDISADTHIFKSTCTSWAQYQPGIND 528
Query: 468 ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 526
+++ HV +LP VF PG VRPSRP K KV ++P A ++ D
Sbjct: 529 LNITHVRNYDLPEDVFQPGEVRPSRPKK-----------KVVKKSEPTAQ--KRNIHALD 575
Query: 527 NVDTHLRNAKCHAT---MPSSSG 546
N AK HA+ MPS++
Sbjct: 576 NEAPSENPAKRHASPNGMPSAAA 598
>gi|324975506|gb|ADY62687.1| PAPa [Candida orthopsilosis]
Length = 552
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/420 (45%), Positives = 272/420 (64%), Gaps = 8/420 (1%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N Q G+T PISL PT D L K L+ YES+ + R EVL L ++ + +
Sbjct: 2 NNQTYGVTPPISLTDPTSKDKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V ++S K + + ++A KIFTFGSYRLGV+GP +DID L V PRH TRE DFF
Sbjct: 62 VYEVSLRKNMTQGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTVFE 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L PE+ E++ V +A VP++K +F+G+SIDLL+A+L + +P DL + ++L+N D
Sbjct: 121 KILRGRPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNID 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +R+LNG RVTD+ILRLVPK F+ LR ++ WA++R VY+NV GF GG+ WA+LVA
Sbjct: 181 EKDMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV ++++ +FF++Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 241 RICQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N++ ST +I+M+EF RG EI + + W L E +FF YK
Sbjct: 301 VITPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQK--VWSHLLERHSFFHQYK 358
Query: 365 NYL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 423
YL + + NA++ + G VES+LR L K+E+ + HP+ F + YC
Sbjct: 359 FYLCVVAATKSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPYVKSFEN---AYYC 414
>gi|19073993|ref|NP_584599.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|19068635|emb|CAD25103.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|449329262|gb|AGE95535.1| poly (a) polymerase type 1 [Encephalitozoon cuniculi]
Length = 505
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/502 (38%), Positives = 306/502 (60%), Gaps = 25/502 (4%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
S + G+T P+S T++++ + +++KYL++ +E +E +RE VLG+L+ +V+
Sbjct: 4 SEKSYKYGVTGPLSTRESTEEEIRLSGEMDKYLQERGFFEDDKEGQTRERVLGKLNFMVR 63
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
+V +++R KG D + KIFTFGSYRLGVH GADID LC+ PRH +R DFF
Sbjct: 64 EFVARMARNKGSGDGE-RPCGGKIFTFGSYRLGVHSKGADIDALCIVPRHVSRS-DFFTH 121
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 182
++ L P + E+ + DA VP++K KF G+ IDL++ARLS+ V+ + +++ D++L++
Sbjct: 122 FYEELKGDPNIEEVTKIEDAFVPIIKLKFQGIPIDLVFARLSIPVVKDGINLLNDTLLKS 181
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
DE+ + SLNG RVTD++L LVP ++ F + LRC+++WAKRR VY N G+ GG+ ++L
Sbjct: 182 MDEKCILSLNGSRVTDEMLNLVPSVKTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLC 241
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VAR+CQLYPNA +V +FF +++ W+WP PV+L + + + L+VWDP+ P DKYH
Sbjct: 242 VARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHR 301
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MP+ITPAYP M +++NVS ST ++ EF R H+I E+N D+ +FE FF
Sbjct: 302 MPVITPAYPSMCATHNVSNSTQHVITMEFTRAHKILSDPERN----DFRRIFELSDFFSR 357
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL- 421
Y+ ++ + + +D W+G++ES++R L K E ++L P P F + +
Sbjct: 358 YRLFVEVLAMSSCEEDFPKWEGYLESKIRILASKFE-AVDDVLYAIPFPKAFRVAEESIE 416
Query: 422 -----------YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISV 470
++F+ + +PV +G++ + VKEF + V Y R GM+I V
Sbjct: 417 KIGPRMEGMKKCTAFFIAI---DVIPV-KGKKVIVEQQVKEFIEFVREYEGRASGMRIEV 472
Query: 471 AHVTRRNLPNF--VFPGGVRPS 490
+ R+++ F VF G PS
Sbjct: 473 NSLKRKDVQGFLRVFYGKESPS 494
>gi|325090895|gb|EGC44205.1| poly(A) polymerase Pap [Ajellomyces capsulatus H88]
Length = 594
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/418 (44%), Positives = 271/418 (64%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M ++ ++ G+T P+S A PT ++ L L+ N +E+ E R++ L + ++
Sbjct: 1 MAAAPTRQWGVTPPVSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ + A KIFT+GSYRLGV+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L M + +L VPDA+VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPILENMAPKGAIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPLNLDLRNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
DKYHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 300 DKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQ--LSWNDLFTRH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF + YK YL I ++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 358 TFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 28/143 (19%)
Query: 410 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 467
HP D LY + Y++GL+ K VP DI FK + + +PG+
Sbjct: 472 HPN--GDNGCTLYTTTYYIGLELKPLVP-------DISADTHIFKSTCTSWAQYQPGIND 522
Query: 468 ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 526
+++ HV +LP VF PG VRPSRP K KV ++P A ++ D
Sbjct: 523 LNITHVRNYDLPEDVFQPGEVRPSRPKK-----------KVVKKSEPTAQ--KRNIHALD 569
Query: 527 NVDTHLRNAKCHAT---MPSSSG 546
N AK HA+ MPS++
Sbjct: 570 NEAPSENPAKRHASPNGMPSAAA 592
>gi|154282671|ref|XP_001542131.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
gi|150410311|gb|EDN05699.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
Length = 594
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/418 (44%), Positives = 271/418 (64%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M ++ ++ G+T P+S A PT ++ L L+ N +E+ E R++ L + ++
Sbjct: 1 MAAAPTRQWGVTPPVSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ + A KIFT+GSYRLGV+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L M + +L VPDA+VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPILENMAPKGAIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPLNLDLRNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
DKYHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 300 DKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQ--LSWNDLFTRH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF + YK YL I ++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 358 TFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 410 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 467
HP D LY + Y++GL+ K VP DI FK + + +PG+
Sbjct: 472 HPN--GDNGCTLYTTTYYIGLELKPLVP-------DISADTHIFKSTCTSWAQYQPGIND 522
Query: 468 ISVAHVTRRNLPNFVF-PGGVRPSRPSK 494
+++ HV +LP VF PG VRPSRP K
Sbjct: 523 LNITHVRNYDLPEDVFQPGEVRPSRPKK 550
>gi|425765475|gb|EKV04155.1| Poly(A) polymerase Pap [Penicillium digitatum Pd1]
gi|425778347|gb|EKV16478.1| Poly(A) polymerase Pap [Penicillium digitatum PHI26]
Length = 597
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/418 (44%), Positives = 267/418 (63%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + + ++ G+T PIS PT D+L L L+ N +E E R++VL L ++
Sbjct: 1 MATPSVRQWGVTPPISTVLPTKDELSANDDLIAELKAQNNFELPTETERRKQVLQLLQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+V+ +SR KGL+ ++ + KIFT+GSYRLGV+GPG+DIDTL VGP+H + DFF
Sbjct: 61 TVEFVQVVSRKKGLSPAAVEASGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLID-DFF 119
Query: 121 GELHQMLTEMPE---VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
E +L M + ++ PVPDA VP++K + G+SIDL++ARL + IP +LD+ +
Sbjct: 120 AEFPPILQRMASEGAIEKMTPVPDAFVPIIKLELCGISIDLIFARLVIPAIPMNLDLKNN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++N+S ST +++ E QRG +I + + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFMKQ--LSWQDLFARH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF YK YL I S++ + W G VES+LR L ++R + HP P F
Sbjct: 358 TFFTHDYKYYLSITASSKTKEAESVWSGLVESKLRHLVGALDRKPIVAV-AHPFPKGF 414
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 423 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQISVAHVTRRNLPNF 481
+Y++GL+ K P G+ DI + FK + + ++ M+++V HV +LP+
Sbjct: 489 TTYYIGLELKPLEP-GQSRSLDISTDSQIFKSTCTSWPGYQEEVMELAVTHVRSFDLPDD 547
Query: 482 VF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQT 524
VF PG R SRP K A +K S G+ +G ++Q
Sbjct: 548 VFQPGETRASRPKKKVTKRSEAAGQKRSIGELDGSTEGAAKRQV 591
>gi|238484201|ref|XP_002373339.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
gi|83765996|dbj|BAE56139.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701389|gb|EED57727.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
Length = 609
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/418 (44%), Positives = 269/418 (64%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ G+T PIS PT D+L L L+ N +ES E R+ L + ++
Sbjct: 1 MATPPVRQWGVTPPISTVLPTPDELAANDDLISELKLQNNFESPAETEHRKNTLQLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ ++ A KIFT+GSYRLGV+GPG+DIDTL VGP+H + DFF
Sbjct: 61 TVEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLIVGPKHVVID-DFF 119
Query: 121 GELHQMLTEM-PE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L M P+ V ++ PVPDA VP++K +FSG+SIDL+YARL + +P +LD+ +
Sbjct: 120 SDFPPVLERMAPQGAVEKMTPVPDAFVPIIKLEFSGISIDLIYARLIVPSVPLNLDLKNN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E QRG +I + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQN--TWNDLFARH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
+FF YK YL I S+ + W G VES++R L ++R + + HP P F
Sbjct: 358 SFFTRDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKS-TIAVAHPFPKGF 414
>gi|401825414|ref|XP_003886802.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
gi|392997958|gb|AFM97821.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
Length = 506
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/498 (38%), Positives = 306/498 (61%), Gaps = 25/498 (5%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
S + G+T P+S+ T++D+ + +++ YL++ +E +E +RE VLG+L+ +V
Sbjct: 3 ASERSYKYGVTGPLSMKESTEEDIRLSEEMDTYLQERGFFEDCKEGQTRERVLGKLNFMV 62
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K +V ++++ KG N + KIFTFGSYRLGVHG G DID LC+ PRH TR DFF
Sbjct: 63 KEFVARMAKNKG-NGDGEKAYGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTRS-DFFT 120
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++ L E P + + + DA VP++KF+F G+ IDL++ARL++ V+ + +++ D++L+
Sbjct: 121 YFYEELKEDPNIEGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLK 180
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
+ DE+ + SLNG RVTD++L LVP ++ F + LRC+++WAKRR VY N G+ GG+ ++L
Sbjct: 181 SMDEKCILSLNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSL 240
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
VAR+CQLYPNA +V +FF +++ W+WP PV+L + + + L+VWDP+ P DKYH
Sbjct: 241 CVARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYH 300
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MP+ITPAYP M +++NVS ST ++ EF R HEI EKN D+ +FE FF
Sbjct: 301 RMPVITPAYPSMCATHNVSNSTQHVITMEFSRAHEILSNPEKN----DFRRIFELSDFFS 356
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS------ 415
YK ++ + + + + W+G+VES++R L K E ++L P P F
Sbjct: 357 RYKLFVEVLAMSTSEEGFAKWEGYVESKIRILASKFE-AVDDILYAIPFPKAFRVGEESI 415
Query: 416 -----DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQIS 469
S+ C+ +F+ + +PV +G++ + VKEF + + Y ++ M+I
Sbjct: 416 RKIRPGASEVKKCTAFFIAIDI---IPV-KGKKVVVEQQVKEFMEFIKEYEGKESSMRIE 471
Query: 470 VAHVTRRNLPNF--VFPG 485
V + ++++ F VF G
Sbjct: 472 VNSLKKKDIQGFLRVFYG 489
>gi|317140350|ref|XP_001818141.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
gi|391870730|gb|EIT79906.1| poly(A) polymerase [Aspergillus oryzae 3.042]
Length = 599
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/418 (44%), Positives = 269/418 (64%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ G+T PIS PT D+L L L+ N +ES E R+ L + ++
Sbjct: 1 MATPPVRQWGVTPPISTVLPTPDELAANDDLISELKLQNNFESPAETEHRKNTLQLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ ++ A KIFT+GSYRLGV+GPG+DIDTL VGP+H + DFF
Sbjct: 61 TVEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLIVGPKHVVID-DFF 119
Query: 121 GELHQMLTEM-PE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L M P+ V ++ PVPDA VP++K +FSG+SIDL+YARL + +P +LD+ +
Sbjct: 120 SDFPPVLERMAPQGAVEKMTPVPDAFVPIIKLEFSGISIDLIYARLIVPSVPLNLDLKNN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E QRG +I + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQN--TWNDLFARH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
+FF YK YL I S+ + W G VES++R L ++R + + HP P F
Sbjct: 358 SFFTRDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKS-TIAVAHPFPKGF 414
>gi|367008660|ref|XP_003678831.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
gi|359746488|emb|CCE89620.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
Length = 582
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/454 (42%), Positives = 293/454 (64%), Gaps = 15/454 (3%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
N Q++ GIT P+S AG T + L + L+ +ES++E +R +VL L ++ +
Sbjct: 2 NYQKVYGITGPVSTAGSTAAENKLNDGLIQELKKEGSFESEQETENRVKVLKTLQELTQE 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A K+F +GSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYRVSKKKNMSDGMARDAGGKVFPYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
++L E+ E+ VPDA VP++K KFSG+SIDL+ A L L IP+ L ++ ++L+N
Sbjct: 121 DELLRGRQELEEIAAVPDAFVPIIKMKFSGISIDLICAHLDLAQIPQSLTLADKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR +Y+NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAIYANVFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST ++++ E RG I + N+ W LF+ TFF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILGELGRGIRITNDIFTNKK--TWADLFQRHTFFHEY 358
Query: 364 KNYLRIDISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
K YL + ++A N D ++ W G VES++R L LK+E T + HP+ +KP
Sbjct: 359 KFYLTV-MAATNGDSEQHLKWSGMVESKVRLLVLKLEALT-GIKIAHPY-------TKPF 409
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQA 455
+Y+ + ++ V + +KEFK+
Sbjct: 410 ETAYYYHNEEERKKIVDNYGTYKTEDVLKEFKKV 443
>gi|67517193|ref|XP_658478.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|40746747|gb|EAA65903.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|259488841|tpe|CBF88615.1| TPA: poly(A) polymerase Pap (AFU_orthologue; AFUA_1G15340)
[Aspergillus nidulans FGSC A4]
Length = 601
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/415 (45%), Positives = 269/415 (64%), Gaps = 8/415 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S ++ G+T PIS PT +L L L+ N +ES E R++VL L ++
Sbjct: 6 STTRQWGVTPPISTTLPTAQELSANDDLIAELKLQNNFESPAETERRKQVLQLLQRVTIE 65
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+VK +SR KGL+ ++ A KIFT+GSYRLGV+GPG+DIDTL +GP+H + DFF E
Sbjct: 66 FVKVVSRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVLGPKHVVID-DFFAEF 124
Query: 124 HQMLTEM-PE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
+L M P+ V ++ PVPDA VP++K + SG+SIDL++ARL + IP +LD+ + L
Sbjct: 125 PPLLESMAPQGAVEKITPVPDAFVPLIKLELSGISIDLIFARLIVPSIPLNLDLKNNDYL 184
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA
Sbjct: 185 RGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWA 244
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+ D++
Sbjct: 245 MLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRF 304
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP M +++N+S ST +++ E QRG +I + + +A W+ LF+ +FF
Sbjct: 305 HLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIWAKQA--TWNDLFKKHSFF 362
Query: 361 -EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
YK YL + S+ + W G VES++R L ++R + HP P F
Sbjct: 363 TNDYKYYLGVTASSRTKEAESVWSGLVESKVRHLVGALDRKP-TIAVAHPFPKGF 416
>gi|396080920|gb|AFN82540.1| poly (A) polymerase type 1 [Encephalitozoon romaleae SJ-2008]
Length = 505
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/497 (39%), Positives = 304/497 (61%), Gaps = 25/497 (5%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
S + G+T P+S+ T++D+ + +++ YL++ +E EE +RE VLG+L+ +VK
Sbjct: 4 SERNYKHGVTGPLSMKESTEEDVKLSEEMDMYLQERGFFEDDEEGQTRERVLGKLNFMVK 63
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
+V ++++ KG N + KIFTFGSYRLGVHG G DID LC+ PRH TR DFF
Sbjct: 64 EFVARMAKNKG-NGDGEKAYGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTRN-DFFTY 121
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 182
++ L P + + + DA VP++KF+F G+ IDL++ARL++ V+ + +++ D++L++
Sbjct: 122 FYEELKGDPNIKGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKS 181
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
DE+ + SLNG RVTD++L LVP ++ F + LRC+++WAKRR VY N G+ GG+ ++L
Sbjct: 182 MDEKCILSLNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLC 241
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VAR+CQLYPNA +V +FF +++ W+WP PV+L + + + L+VWDP+ P DKYH
Sbjct: 242 VARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHR 301
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MP+ITPAYP M +++NVS ST ++ EF R HEI +EKN D+ +FE FF
Sbjct: 302 MPVITPAYPSMCATHNVSNSTQHVITMEFSRAHEILSNLEKN----DFRRIFELSDFFGR 357
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS------D 416
YK ++ + + + W+G+VESR+R L K E ++L P P F
Sbjct: 358 YKLFVEVLAMSTLEEGFTKWEGYVESRIRILASKFE-AVDDILYAIPFPKAFRVLEESIG 416
Query: 417 KSKP------LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISV 470
K KP ++F+ + +PV +G++ + VKEF + V Y ++ M I +
Sbjct: 417 KIKPGAEEVKRCTAFFIAIDV---IPV-KGKKVVVEQQVKEFMEFVKEYEGKESNMWIEI 472
Query: 471 AHVTRRNLPNF--VFPG 485
+ R+++ F VF G
Sbjct: 473 NSLKRKDVQGFLRVFYG 489
>gi|47221727|emb|CAG10199.1| unnamed protein product [Tetraodon nigroviridis]
Length = 685
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 243/684 (35%), Positives = 353/684 (51%), Gaps = 54/684 (7%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G + + GIT ISLA P + D T+KL ++ ++E +EE
Sbjct: 11 GQQSQKHYGITSAISLAPPREIDHHYTKKLCDAMKPFGVFEDEEELNHXXXXXXXXXXXX 70
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
GADID LCV PRH R DFF
Sbjct: 71 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGADIDALCVAPRHVERT-DFFQ 129
Query: 122 ELHQMLTEMPEVTELHP---VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS 178
+ L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DS
Sbjct: 130 SFFEKLKQHEEIKDLRVCLCVEDAFVPVIKFKFDGIEIDLLFARLALPSIPDNLDLRGDS 189
Query: 179 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 238
IL+N D + +RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++
Sbjct: 190 ILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVS 249
Query: 239 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 298
WA+LVAR CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D
Sbjct: 250 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSD 309
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
+YHLMPIITPAYP NS+YNVSTST IM +EF+ G + + + + +A +W LFEP
Sbjct: 310 RYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKA--EWSKLFEPPH 367
Query: 359 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFS 415
FF+ YK+Y+ + SA ++ W G VES++R L +ER+ Y + +P PG
Sbjct: 368 FFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKE 427
Query: 416 DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISV 470
++++ + S +F+G+ K+ V E D+ ++ F V + + K GM+I
Sbjct: 428 NRNENEFVSMWFIGIIFKK-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEA 486
Query: 471 AHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT 530
HV ++ L N P + + + D R+ S + + TD T
Sbjct: 487 THVKKKQL-NLYLPPELVQKKKRQSIADLNRSSNGGSSKRISLDSSHLDSSRDTD--TGT 543
Query: 531 HLRNAKCHATMPSSSGE---------FREGSPIMSTISSSSINLQFEHMDANELAGSNRE 581
+ C + P+S E F E SP SS++ + Q + M +AGS++
Sbjct: 544 PFSSPPCKVSKPASDTEDSVSPPKKLFVEDSP----ASSAAPDAQDQGMSV-PVAGSSQP 598
Query: 582 KVENNL--------------TDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNS 627
++ L +++ R +NS++++ + + P P +G + S
Sbjct: 599 FLKWRLPSMELPDASSPLPASNTCRVVKNSIKLALNRHSITPP---KPPAEG-----ALS 650
Query: 628 KDAEKLAIEKIMSGPYVADQAFPL 651
D + EK MS P + F L
Sbjct: 651 TDDVPASEEKGMSIPVIGSSTFCL 674
>gi|403213836|emb|CCK68338.1| hypothetical protein KNAG_0A06840 [Kazachstania naganishii CBS
8797]
Length = 576
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/406 (45%), Positives = 269/406 (66%), Gaps = 15/406 (3%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
N Q++ GIT P+S+ GPT + L + L+ N +ES+ E +R ++L L + +
Sbjct: 2 NYQKVYGITGPVSVVGPTAPENKLNDLLIQELKSENSFESEAETATRVKILEVLQALTEK 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V +S+ + ++D + ++ K+FTFGSYRLGVHGPG+DIDTL V P+H +R+ DFF
Sbjct: 62 FVYTVSKRRNMSDGMARDGGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSRD-DFFDVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
++L E PE+ E+ PVPDA VP++K KFSGVSIDLL A+L + +P+ L +S ++L+N
Sbjct: 121 DKLLRERPELDEIAPVPDAFVPIIKIKFSGVSIDLLCAKLDIAQVPKTLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF++Y+ W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVIINRFFKIYSDWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST I++ E QRG +I + N+ W+ LF+ FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKSIILQELQRGIQITNDIFTNKK--TWNDLFKRHDFFYKY 358
Query: 364 KNYLRIDISA--ENADDLR---------NWKGWVESRLRQLTLKIE 398
K YL I S DD W G VES+ R L +K+E
Sbjct: 359 KFYLTITASTREHTGDDGEKTGGDEQHLKWSGLVESKARLLVMKLE 404
>gi|328351170|emb|CCA37570.1| poly(A) polymerase [Komagataella pastoris CBS 7435]
Length = 908
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/406 (45%), Positives = 267/406 (65%), Gaps = 5/406 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T IS AGP+ ++ L LR +ES+ + R +VL L Q+ + +V +S
Sbjct: 363 GVTPAISTAGPSSEETRLNDLLVDELRRQGSFESEAATLKRAKVLKTLQQLTQEFVYSVS 422
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
++K +++ + ++A KIFTFGSYRLGV+GPG+DIDTL V P+H RE DFF ++L +
Sbjct: 423 KSKNMDEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVFPKHINRE-DFFTVFEKILRQ 481
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
PE+ E+ VPDA VP++K +F G+SIDL+ ARL + +P +L + ++L+N DE+ +R
Sbjct: 482 RPELEEIQSVPDAFVPIIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDEKDLR 541
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
+LNG RVTD+IL LVP+ F+ LR ++ WA+RR VY NV GF GG+ WA+LVARICQL
Sbjct: 542 ALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVARICQL 601
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV ++++S+FF + QW WP PVLL IE+G L ++VW+PR P DKYH MP+ITPA
Sbjct: 602 YPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPA 661
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP M +++N++ ST ++++ EFQRG I E W LF FF YK YL +
Sbjct: 662 YPSMCATHNITESTKKVILQEFQRGSGIV--TEIFSGAKKWSDLFTKHDFFRRYKFYLTV 719
Query: 370 DISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
+ + ++++ + + G VES+LR L K+E + N+ HP F
Sbjct: 720 IAATKGSSEEQKKFAGMVESKLRLLVQKLENNE-NINLAHPFVKTF 764
>gi|207343429|gb|EDZ70889.1| YKR002Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271932|gb|EEU06953.1| Pap1p [Saccharomyces cerevisiae JAY291]
Length = 568
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/457 (42%), Positives = 287/457 (62%), Gaps = 7/457 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L ++ +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPL 421
K YL I +D+ W G VES++R L +K+E T + HP F S P
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLT-GIKIAHPFTKPFESSYCCPT 417
Query: 422 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 458
Y M +Q K G E ++L E K+ S+
Sbjct: 418 EDDYEM-IQDKYGSHKTETALNALKLVTDENKEEESI 453
>gi|255085208|ref|XP_002505035.1| predicted protein [Micromonas sp. RCC299]
gi|226520304|gb|ACO66293.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/384 (48%), Positives = 256/384 (66%), Gaps = 13/384 (3%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEAN 83
DL + LE L N++E+ EE REEVLG +++ ++ W + S +KG+ + L N
Sbjct: 2 DLKLSADLEARLHLENVFEAPEECTRREEVLGEINEALQQWCRARSASKGIEEDLDPRCN 61
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE--------LHQMLTEMPEVTE 135
++TFGSYRLGVHGP ADIDTLC+GPRH TR EDFFG + + P +
Sbjct: 62 --LYTFGSYRLGVHGPAADIDTLCIGPRHLTRAEDFFGSEWTGYEGSFYLEMKNHPGTDQ 119
Query: 136 LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGC 194
+ VPDA VP +K F G ID+ Y + +V +PEDLD+ Q +ILQN D+ +V+SLNGC
Sbjct: 120 VVAVPDAVVPELKLVFRGFEIDIAYVCMGSYVSVPEDLDVCQTTILQNLDDASVKSLNGC 179
Query: 195 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 254
RV DQ+LRLVP FR LR +R WAK RGVYSNV G+ GG+N ALLVAR+CQLYPNA
Sbjct: 180 RVADQLLRLVPNHDAFRIALRALRVWAKERGVYSNVLGYFGGVNLALLVARVCQLYPNAA 239
Query: 255 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMN 314
PSMLV FF+++ W+W PV+L I + GL+VWD R N +++ LM IITPAYP N
Sbjct: 240 PSMLVYSFFQLWDAWQWSTPVMLTPIVDEGHGLRVWDERVNKAERFQLMKIITPAYPAQN 299
Query: 315 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE 374
S++NV+ STL ++ +EF+RG E+C + ++ W++L+EP FF +K+YL++ I+A
Sbjct: 300 STFNVTHSTLHVLKNEFKRGREVCAEVLMSKK--RWESLWEPLPFFTMHKHYLQVTIAAV 357
Query: 375 NADDLRNWKGWVESRLRQLTLKIE 398
+ DD + W+GWV SRLR L +E
Sbjct: 358 SEDDFKKWEGWVHSRLRMLVQGVE 381
>gi|384494476|gb|EIE84967.1| hypothetical protein RO3G_09677 [Rhizopus delemar RA 99-880]
Length = 408
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/389 (46%), Positives = 258/389 (66%), Gaps = 5/389 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GITEP+SL P + D+ T +L+K L LY+S+E A RE VL LD++ K +V+ +
Sbjct: 12 GITEPLSLEKPKEHDIKLTDELQKTLVQYGLYDSKERAKQREYVLKSLDKMTKKFVQIVY 71
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+G + Q +A K+ T+GSYRLG + ADIDTLCV P++ +R+ DFF + +L
Sbjct: 72 ERQGFSKQEAIQAGGKVLTYGSYRLGANAADADIDTLCVFPKYVSRK-DFFTIMLSLLRS 130
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
++ ++ PV D++VPV+KFK++ + ID + ARL++ +PED+D+S IL DE ++R
Sbjct: 131 NEQIKDITPVTDSYVPVIKFKYNDIPIDFVCARLTVDQVPEDIDLSDPKILWGLDEYSIR 190
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RV D ILRLVP I+ FRT LRC++ WA R+ +YSN+ GFLGG+ WA+LVAR+CQL
Sbjct: 191 SLNGARVADDILRLVPNIETFRTALRCIKLWATRKAIYSNILGFLGGVAWAILVARVCQL 250
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHLMPIIT 307
YP+A S +V FF++ W WP+PV+L A+E+G + W+P+ NP D+ H MPIIT
Sbjct: 251 YPHASASTVVYHFFQILVHWSWPSPVMLKAVEDGPPLAATRPWNPKLNPTDRSHRMPIIT 310
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
P+YP M S++NV ST RI+M E ++ EI + + A W LF+ FFE Y YL
Sbjct: 311 PSYPSMCSTHNVIPSTQRIIMGEIKQAAEIVQKIRTGSA--TWARLFQSHNFFEIYMQYL 368
Query: 368 RIDISAENADDLRNWKGWVESRLRQLTLK 396
+I + A+N + W G VE+RLRQL L+
Sbjct: 369 QITVVADNYNLQLKWAGLVEARLRQLLLE 397
>gi|254567353|ref|XP_002490787.1| Poly(A) polymerase [Komagataella pastoris GS115]
gi|238030583|emb|CAY68507.1| Poly(A) polymerase [Komagataella pastoris GS115]
Length = 551
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/406 (45%), Positives = 267/406 (65%), Gaps = 5/406 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T IS AGP+ ++ L LR +ES+ + R +VL L Q+ + +V +S
Sbjct: 6 GVTPAISTAGPSSEETRLNDLLVDELRRQGSFESEAATLKRAKVLKTLQQLTQEFVYSVS 65
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
++K +++ + ++A KIFTFGSYRLGV+GPG+DIDTL V P+H RE DFF ++L +
Sbjct: 66 KSKNMDEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVFPKHINRE-DFFTVFEKILRQ 124
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
PE+ E+ VPDA VP++K +F G+SIDL+ ARL + +P +L + ++L+N DE+ +R
Sbjct: 125 RPELEEIQSVPDAFVPIIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDEKDLR 184
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
+LNG RVTD+IL LVP+ F+ LR ++ WA+RR VY NV GF GG+ WA+LVARICQL
Sbjct: 185 ALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVARICQL 244
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNAV ++++S+FF + QW WP PVLL IE+G L ++VW+PR P DKYH MP+ITPA
Sbjct: 245 YPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPA 304
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP M +++N++ ST ++++ EFQRG I E W LF FF YK YL +
Sbjct: 305 YPSMCATHNITESTKKVILQEFQRGSGIV--TEIFSGAKKWSDLFTKHDFFRRYKFYLTV 362
Query: 370 DISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
+ + ++++ + + G VES+LR L K+E + N+ HP F
Sbjct: 363 IAATKGSSEEQKKFAGMVESKLRLLVQKLENNE-NINLAHPFVKTF 407
>gi|401624879|gb|EJS42918.1| pap1p [Saccharomyces arboricola H-6]
Length = 569
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/396 (45%), Positives = 266/396 (67%), Gaps = 4/396 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S+ + GIT P+S G T + L + L+ +E++ E +R +VL L ++ +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLVQELKKEGSFETEHETANRVQVLKILQELAQR 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P+ L ++ ++L+N
Sbjct: 121 DALLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPQSLTLADKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST ++++ EF+RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKK--SWANLFEKNDFFYRY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWGGLVESKVRLLIMKLE 394
>gi|444321773|ref|XP_004181542.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
gi|387514587|emb|CCH62023.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
Length = 574
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/396 (44%), Positives = 269/396 (67%), Gaps = 5/396 (1%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
N Q++ GIT P+S GPT + +L + L+ N +E++ E R +L L ++ +
Sbjct: 2 NYQKIYGITGPVSTVGPTAAENKLNDELIQELKKENSFETELETEKRVNILKTLQKLTEE 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + +++ K+FTFGSYRLGVHGPG+DIDTL V P+H +R+ DFF
Sbjct: 62 FVYRVSKKKNMSDGMARDSGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSRD-DFFTIF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
++L E+ E+ PVPDA VP++K +FSG+SIDLL ARL L IP L +S ++L+N
Sbjct: 121 AELLRGREEIEEIAPVPDAFVPIIKTQFSGISIDLLCARLDLAQIPLSLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R++NG RVTD+IL LVPK FR LR ++ WA RR +Y+NV GF GG+ WA+LV
Sbjct: 181 DEKDLRAINGTRVTDEILELVPKPNVFRIALRAVKIWAPRRAIYANVFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF++ +W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILLEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST ++++ EF+RG ++ + N+ W LF+ FF Y
Sbjct: 301 PVITPAYPSMCATHNITDSTKKVILQEFERGVQVTNDIFTNKK--TWADLFKKHEFFHKY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL + S + + W G+VES+LR L LK+E
Sbjct: 359 KFYLTVVASTRGSTEQHLKWSGFVESKLRLLVLKLE 394
>gi|344231415|gb|EGV63297.1| Poly(A) polymerase PAPalpha [Candida tenuis ATCC 10573]
Length = 560
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/409 (44%), Positives = 273/409 (66%), Gaps = 5/409 (1%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
G+T PIS P+ ++ +L L+ +ES++ R E+L ++V+ +V K+
Sbjct: 6 FGVTPPISTDNPSPKEITLNDQLIAELKARGSFESEQATRKRVEILNLFQKLVQEFVHKV 65
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S++K +++ + ++A KIFTFGSYRLGV+GPG+DIDTL V P+H TRE DFF ++
Sbjct: 66 SKSKNMSEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTRE-DFFSVFESIVR 124
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
E PE+ E+ VPDA VP++K +F G+SIDL+ A L++ +P ++ + ++L+N DE+ +
Sbjct: 125 ERPELEEITSVPDAFVPIIKIEFDGISIDLICATLNVPQVPLNMTLDDKNLLRNLDERDM 184
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
R+LNG RVTD+IL+LVPK F+ LRC++ WA+ R VY NV GF GG+ WA++VARICQ
Sbjct: 185 RALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQARAVYGNVFGFPGGVAWAMMVARICQ 244
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNAV +++V +FF +YT+W WP PVLL IE+G L ++VW+PR D+ H MPIITP
Sbjct: 245 LYPNAVGAVIVDKFFNIYTKWNWPQPVLLKPIEDGPLQVKVWNPRLYTNDRNHRMPIITP 304
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP M +++N+++ST ++++ E +G +I ++ + W LF+ FF YK YL
Sbjct: 305 AYPSMCATHNITSSTQKVILSELVKGVDIVGDIKLGKR--TWSDLFQRHDFFFRYKFYLC 362
Query: 369 IDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
I + + N ++ W G+VES+LR L K+E T + HP+ DF+D
Sbjct: 363 IVVGTKANEEEHSKWSGFVESKLRLLVQKLEA-TSGIEIAHPYVKDFND 410
>gi|398364849|ref|NP_012927.3| Pap1p [Saccharomyces cerevisiae S288c]
gi|266739|sp|P29468.1|PAP_YEAST RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|3527|emb|CAA46250.1| polyA polymerase 1 [Saccharomyces cerevisiae]
gi|4099|emb|CAA42852.1| poly(A)polymerase [Saccharomyces cerevisiae]
gi|486407|emb|CAA82072.1| PAP1 [Saccharomyces cerevisiae]
gi|151941547|gb|EDN59910.1| poly(A) polymerase [Saccharomyces cerevisiae YJM789]
gi|190409824|gb|EDV13089.1| poly(A) polymerase [Saccharomyces cerevisiae RM11-1a]
gi|259147834|emb|CAY81084.1| Pap1p [Saccharomyces cerevisiae EC1118]
gi|285813261|tpg|DAA09158.1| TPA: Pap1p [Saccharomyces cerevisiae S288c]
gi|323304127|gb|EGA57905.1| Pap1p [Saccharomyces cerevisiae FostersB]
gi|349579565|dbj|GAA24727.1| K7_Pap1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298143|gb|EIW09241.1| Pap1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|228305|prf||1802393A poly(A) polymerase
Length = 568
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/396 (45%), Positives = 265/396 (66%), Gaps = 4/396 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L ++ +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|323308211|gb|EGA61460.1| Pap1p [Saccharomyces cerevisiae FostersO]
Length = 568
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/396 (45%), Positives = 265/396 (66%), Gaps = 4/396 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L ++ +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|429328821|gb|AFZ80581.1| poly A polymerase, putative [Babesia equi]
Length = 523
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/490 (38%), Positives = 298/490 (60%), Gaps = 20/490 (4%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+R GITEP++ GP++DDL + ++ L+ NL+E+ E RE VL L+++++ +V+
Sbjct: 11 KRYGITEPVTTQGPSNDDLKASEEITALLKSYNLFETDEGKQRRELVLEALNRLLQQFVR 70
Query: 67 KISRA-KGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
+ ++ +G+++ + K+ TFGSYRLG+ P +DID LC+ P+ TRE FF + +
Sbjct: 71 RQAKKNQGISESEANTISGKLLTFGSYRLGIVAPDSDIDVLCLCPKCVTRES-FFSDFYI 129
Query: 126 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 185
LT++ +++L VPDA+ PV+K + +SID+L+A L + ++++ D+IL+N ++
Sbjct: 130 SLTKVEAISKLQAVPDAYTPVIKLCYYDISIDILFANLDARTVNPNINVLDDNILRNMND 189
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
TVRS+NGCRV IL VP NFR TLR ++ WA RR +YS V G+LGG+ WA+L AR
Sbjct: 190 STVRSINGCRVASFILDSVPNKANFRMTLRFIKLWASRRKIYSTVVGYLGGVAWAILTAR 249
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKY 300
+CQLYPN VP+ L+ +FFRVY+ W W PV LC I++ G + +VWDP+ NP D+
Sbjct: 250 VCQLYPNYVPNQLIEKFFRVYSLWNWKIPVTLCKIKQVPNLPGFMSFKVWDPQNNPHDRQ 309
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA--MEKNEADVDWDTLFEPFT 358
HLMPIITPA+P MNS++NV+ +T R+M DE +R +I ++ KN+ +
Sbjct: 310 HLMPIITPAFPSMNSTHNVTATTKRVMTDELKRARDILKSPNTPKNQLLELVLEEED--- 366
Query: 359 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG--DFSD 416
F +YK++L I++ + W+GW+ SR+R L K+E Q P PG F D
Sbjct: 367 IFSSYKHFLIIEVYGASEHAHGKWEGWIGSRMRFLIKKLENLPNT--QIRPLPGFFKFED 424
Query: 417 KSKPLYCSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLR---KPGMQISVAH 472
S F L+ G+G + DIR +++ FK ++ +T K +++++ H
Sbjct: 425 SEWEYASSAFFALKCLSNDKSGQGSKVLDIRSSIQSFKDIINGWTDMENLKDQIKVNIRH 484
Query: 473 VTRRNLPNFV 482
V LP++V
Sbjct: 485 VKSSQLPDYV 494
>gi|399218218|emb|CCF75105.1| unnamed protein product [Babesia microti strain RI]
Length = 501
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/484 (38%), Positives = 294/484 (60%), Gaps = 17/484 (3%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S G G++ I+L GPT +D+ +L LR +NL+E+++ RE +L L++++
Sbjct: 9 SEGVMYGVSTSITLDGPTPEDIEANEQLLTLLRSLNLFETEKGLRKRELILASLNRLLHN 68
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
++ + +GL++ + +A++ TFGSYRLGV GP +DID LC+ P+ TR DFF
Sbjct: 69 FIHSVCIMQGLDEDDANDVSARLLTFGSYRLGVIGPDSDIDALCLCPQRITRN-DFFTVF 127
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+ +L P V+++H V DA+ P++K + + ID+L+A L + I +L I D IL+N
Sbjct: 128 YDILANHPNVSKIHAVADAYTPLIKLVYDDIDIDILFAILPIPTISPNLSILDDDILRNL 187
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D+ T RS+NGCRV +L VP NFR TLR ++ WA++RG+YSN+ G+LGG+ WA+L
Sbjct: 188 DDITARSINGCRVASLVLSSVPNEHNFRNTLRFIKLWAQKRGIYSNILGYLGGVAWAILT 247
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKD 298
AR+CQLYPN +P+ ++ +FF+VY W W PV++ I++ G + +VWDP+ NP+D
Sbjct: 248 ARVCQLYPNYLPNQIIHKFFKVYMLWNWKYPVVINKIKQPVNVPGLMMFKVWDPKTNPQD 307
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
+ HLMPIITPA+P MNS++NV+ +T R+M++EF+R HE+ K ++ + W+ L EP
Sbjct: 308 RLHLMPIITPAFPAMNSTHNVTNTTKRVMINEFKRAHELL----KTQSQMTWNDLLEPAN 363
Query: 359 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
F +K++L I + A + W GW+ESR+R L K+E + L+ PH D
Sbjct: 364 IFNEFKHFLVIIVVASDEKAHSKWHGWIESRIRFLIRKLEAIEHTELRPWPHSITMEDPD 423
Query: 419 KPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY---TLRKPGMQISVAHVTR 475
F+GL + E QFDIR +KEFK + + T + + + + ++ +
Sbjct: 424 WTNSKWIFIGLSYNK----TEESQFDIRTPIKEFKNLIFSWQELTSYESKVDVRIEYMKK 479
Query: 476 RNLP 479
LP
Sbjct: 480 SQLP 483
>gi|255930343|ref|XP_002556731.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581344|emb|CAP79117.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 590
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/418 (44%), Positives = 266/418 (63%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ G+T PIS PT D+L L L+ N +E E R++VL L ++
Sbjct: 1 MATPPVRQWGVTPPISTVLPTKDELSANDDLIAELKAQNNFELPTETERRKQVLQLLQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+V+ +SR KGL+ ++ + KIFT+GSYRLGV+GPG+DIDTL VGP+H + DFF
Sbjct: 61 TVEFVQVVSRKKGLSPAAVEASGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLID-DFF 119
Query: 121 GELHQMLTEMPE---VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
E +L M + ++ PVPDA VP++K + G+SIDL++ARL + IP +LD+ +
Sbjct: 120 AEFPPVLERMASEGAIEKMTPVPDAFVPIIKLELCGISIDLIFARLVIPSIPMNLDLKNN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++N+S ST +++ E QRG ++ + + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDMVDKIFMKQ--LSWHDLFARH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF YK YL I S++ + W G VES+LR L ++R + HP P F
Sbjct: 358 TFFTHDYKYYLSITASSKTKEAESVWSGLVESKLRHLVGALDRKPI-IAVAHPFPKGF 414
>gi|440634435|gb|ELR04354.1| hypothetical protein GMDG_06729 [Geomyces destructans 20631-21]
Length = 598
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/415 (45%), Positives = 269/415 (64%), Gaps = 11/415 (2%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M S+ + LGIT P+S A PTD + + L + L+ N YES + R E L L I
Sbjct: 1 MASTGEKPLGITAPLSTALPTDSENQASSALIEELKRQNNYESVVDTQKRTEALKALQAI 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+ ++K++S+A+GL D + A+ KIFT+GS+RLGV GPG+DIDTL VGP+H TR+ DFF
Sbjct: 61 TEEFIKQVSKAQGLPDSVANSASGKIFTYGSFRLGVFGPGSDIDTLVVGPKHVTRD-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQ 176
+L M +T+L PV D+ VP++KF+++G+SIDL+++R++ L IP+ L +
Sbjct: 120 KYFPDLLVTMSPPGAITDLTPVVDSFVPIIKFEYAGISIDLIFSRIAVLNQIPQSLTLQD 179
Query: 177 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
++L+ DE +RSLNG RVTD IL LVP+ FRT LR ++ WA+RR +Y+N+ GF GG
Sbjct: 180 SNLLRGLDEADLRSLNGTRVTDAILDLVPQKTIFRTALRGIKLWAQRRAIYANIIGFPGG 239
Query: 237 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 296
+ WA+LVAR+CQLYP A S +V +FFR+ +W+WP PVLL I G L ++VW+PR
Sbjct: 240 VAWAMLVARVCQLYPKATSSTVVLKFFRIMEKWQWPTPVLLTHIASGPLQVKVWNPRIYK 299
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 356
D +HLMPIITPAYP M +++N++ ST I+ E +RG I + + + + W LF
Sbjct: 300 HDSFHLMPIITPAYPSMCATHNITRSTKEIIQRELKRGGNITDQIMSGK--LQWKDLFAK 357
Query: 357 FTFF-EAYKNYLRIDISAENADDLRN-WKGWVESRLRQLTLKIERHTYNMLQCHP 409
TFF E YK YL + ISA + +N W G VES++R L L +E H L HP
Sbjct: 358 HTFFTEGYKYYLSV-ISASTTREAQNIWGGLVESKIRLLVLSLEGHDSIAL-AHP 410
>gi|126030614|pdb|2HHP|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Closed
Conformation
Length = 530
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/396 (45%), Positives = 265/396 (66%), Gaps = 4/396 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L ++ +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|126031338|pdb|2O1P|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
gi|126031339|pdb|2O1P|B Chain B, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
Length = 546
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/396 (45%), Positives = 265/396 (66%), Gaps = 4/396 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L ++ +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|401840600|gb|EJT43353.1| PAP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 569
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/396 (45%), Positives = 265/396 (66%), Gaps = 4/396 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L ++ +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H RE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVIRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DALLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST ++++ EF+RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|10120664|pdb|1FA0|A Chain A, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|10120665|pdb|1FA0|B Chain B, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|188595983|pdb|3C66|A Chain A, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
gi|188595984|pdb|3C66|B Chain B, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
Length = 537
Score = 371 bits (952), Expect = e-99, Method: Compositional matrix adjust.
Identities = 180/396 (45%), Positives = 265/396 (66%), Gaps = 4/396 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L ++ +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|403337557|gb|EJY68000.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 575
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 315/513 (61%), Gaps = 37/513 (7%)
Query: 12 TEPIS--------LAGPTDDDLMRTRKLEKYLR-DVNLYESQEEAVSREEVLGRLDQIVK 62
TEPI+ L T +D + ++++ + L+ D N YES+ + R+ +LG+L+QI+
Sbjct: 27 TEPITTNFERRYYLEKSTYEDTLESKQIVEILKNDFNQYESEGDRKKRDAILGKLNQIIV 86
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
W++ + + +G +D ++ + KIFTFGSYRLGVH P DID LCV PRH R FFGE
Sbjct: 87 EWIQNVGKREGKDDDTVKNSGGKIFTFGSYRLGVHSPDTDIDALCVAPRHIERTRHFFGE 146
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQ 181
L +L P V +L V +A+VPV+ F GV IDLL+AR+ L + ++L ++ D+IL+
Sbjct: 147 LSDILKNHPGVQKLTEVQEAYVPVINMVFEGVEIDLLFARVELKEVGQELVNLLDDNILR 206
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D++++RSLNGCRVTD IL+LVP ++FRTTLR ++ WAK RG+YSNV GFLGG+ WA+
Sbjct: 207 NCDKESIRSLNGCRVTDSILQLVPNQESFRTTLRVIKLWAKVRGIYSNVMGFLGGVAWAI 266
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRW--PNPVLLCAI--EEGSLGLQVWDPRRNPK 297
LVA IC PN P+ L++ FF+ YTQW W NP+LL I + S+ + +
Sbjct: 267 LVANICITCPNLEPNKLLNYFFKAYTQWEWNYQNPILLTEIKNDRNSVNFTIEADLFYEE 326
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA-MEKNE------ADVDW 350
+ LMPIITPA+P MN+++NVS ST R M+ EF++G +I EA + +NE +++W
Sbjct: 327 KQTDLMPIITPAFPSMNATFNVSHSTKRAMLIEFEKGLKITEALLARNEDGSKLHQEMNW 386
Query: 351 DTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY---NMLQC 407
LF+ F FF++Y ++++I I +++A+D + W G++ES++R+L ++E+ ++
Sbjct: 387 RRLFKKFNFFKSYVHFIQIQILSKSAEDHKKWTGFIESKIRKLLQQLEKLNELKGGCMEF 446
Query: 408 HPHPGDFSDKSK---PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS------- 457
P P + ++ P+ +Y+ G++ K+ + + D+ T+K F + +
Sbjct: 447 RPWPKSYHLENNLDFPMDDTYYFGIRIKKNESDAQM-RIDLTDTIKIFYKKLREWISVDH 505
Query: 458 --MYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 488
M + + I + ++ R LP+ + P G +
Sbjct: 506 KLMQMIVDKLVDIKINYIRRETLPDVIRPRGAQ 538
>gi|68482965|ref|XP_714613.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
gi|62900711|sp|Q9UW26.1|PAPA_CANAL RecName: Full=Poly(A) polymerase PAPa; AltName: Full=Polynucleotide
adenylyltransferase a
gi|5771506|gb|AAD51407.1| PAPa [Candida albicans]
gi|46436196|gb|EAK95563.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
Length = 555
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 272/421 (64%), Gaps = 10/421 (2%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N Q G+T PIS+A T + L K L+ +ES+ R EVL L + + +
Sbjct: 2 NNQAYGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V K+S K +++ + ++ KIFTFGSYRLGV+GPG+DIDTL V P+H +R DFF +
Sbjct: 62 VYKVSIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFY 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L E+ E+ PVPDA VP++K +F+G+SIDL++ARL + +P DL + ++L+N D
Sbjct: 121 ELLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNID 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +R+LNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVA
Sbjct: 181 EKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 241 RICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N+++ST ++++ EFQRG E+ + N W L E FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYK 358
Query: 365 NYLRIDISAEN--ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 422
YL I + + A+ L+ + G VES+LR L K+E + HP+ F + Y
Sbjct: 359 FYLCIVAATRSTYAEHLK-YSGMVESKLRLLVQKLEL-VEGIELAHPYVKSFENG---YY 413
Query: 423 C 423
C
Sbjct: 414 C 414
>gi|4062995|dbj|BAA36217.1| poly(A) polymerase isozyme [Candida albicans]
Length = 555
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 272/421 (64%), Gaps = 10/421 (2%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N Q G+T PIS+A T + L K L+ +ES+ R EVL L + + +
Sbjct: 2 NNQAYGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V K+S K +++ + ++ KIFTFGSYRLGV+GPG+DIDTL V P+H +R DFF +
Sbjct: 62 VYKVSIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFY 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L E+ E+ PVPDA VP++K +F+G+SIDL++ARL + +P DL + ++L+N D
Sbjct: 121 ELLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNID 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +R+LNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVA
Sbjct: 181 EKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 241 RICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N+++ST ++++ EFQRG E+ + N W L E FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYK 358
Query: 365 NYLRIDISAEN--ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 422
YL I + + A+ L+ + G VES+LR L K+E + HP+ F + Y
Sbjct: 359 FYLCIVAATRSTYAEHLK-YSGMVESKLRLLVQKLEL-VEGIELAHPYVKSFENG---YY 413
Query: 423 C 423
C
Sbjct: 414 C 414
>gi|239835851|gb|ACS29263.1| pap1 [Clavispora lusitaniae]
Length = 547
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 182/410 (44%), Positives = 269/410 (65%), Gaps = 7/410 (1%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PIS+A T ++ +L K L+ +ES+ R EVL + ++ + +V +
Sbjct: 6 LGVTPPISVANATPKEISLNDELIKELKIRGSFESENATKRRVEVLNIMQKLTEEFVYIV 65
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S+ K ++D + ++A KIFTFGSYRLGV+G G+DIDTL V P+H R+ DFF +L
Sbjct: 66 SKRKNMSDGMAKDAGGKIFTFGSYRLGVYGQGSDIDTLVVVPKHVNRQ-DFFDVFVDLLK 124
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+ E+ E+ VPDA VP++K +F G+SIDL++A+L + +P DL + ++L+N DE+ +
Sbjct: 125 KRSELEEITSVPDAFVPIIKMEFGGISIDLIFAKLDIPRVPRDLTLDNKNLLKNLDEKDL 184
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LVARICQ
Sbjct: 185 RSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQ 244
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPN V +++V +FF++Y+QW WP PVLL IE+G L ++VW+PR P D+ H MP+ITP
Sbjct: 245 LYPNTVSAVIVEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITP 304
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP M +++N++ ST ++M EF RG + + A W LFE FF YK YL
Sbjct: 305 AYPSMCATHNITKSTKDVIMSEFNRGVNVMAQIHAGTA--SWGLLFERHRFFFQYKFYLC 362
Query: 369 IDISAE--NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
I + + +A+ L+ W G +ES++R L K+E T + HP+ F +
Sbjct: 363 IVAATKSSSAEHLK-WSGMIESKVRLLVQKLEL-TEGITLAHPYVKPFEN 410
>gi|365764657|gb|EHN06179.1| Pap1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 488
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 179/396 (45%), Positives = 264/396 (66%), Gaps = 4/396 (1%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L ++ +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 64 WVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+V ++S+ K ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
P+ITPAYP M +++N++ T ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITECTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 364 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 398
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|313216525|emb|CBY37820.1| unnamed protein product [Oikopleura dioica]
Length = 643
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/557 (37%), Positives = 310/557 (55%), Gaps = 36/557 (6%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
GIT +S+ GPT+ D + T L+K + +++ + R +VL +L+++VK +V+K+
Sbjct: 2 FGITSALSVEGPTEKDKVMTEDLQKTIEPYGAFDTPDGLSHRIQVLTKLNELVKDFVRKV 61
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
++ L + L E KI+TFGSYRLGVH DIDTLCV P+H TR FF ML
Sbjct: 62 AKECRLPEHLHGELGGKIYTFGSYRLGVHTSDGDIDTLCVVPQHVTRHH-FFTIFLDMLK 120
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSL-WVIPEDLDISQDSILQNADEQT 187
+ VTE + +A VP++K F G+ +D+L+ARL+ +PED D+ IL+N +E+
Sbjct: 121 KTEGVTECRDIREAFVPLIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLEEKC 180
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
VRSLNGCRVTD+IL LVP I+ FR TLR ++ WA+R+G+Y N GF+GG+ WA+LVAR C
Sbjct: 181 VRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVARTC 240
Query: 248 -------------QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDP 292
QLYPNA PS L+ +FF ++++W WP PV L E+ G VWDP
Sbjct: 241 QVGLSCLEFLAIFQLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDP 300
Query: 293 RRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD--- 349
R NP D+ HLMPIITPAYP NS++NVS STL +M E + +E + + + + D
Sbjct: 301 RFNPLDRSHLMPIITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPN 360
Query: 350 ---WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 406
W LF FF YK+++ + +A+ + + W G VES +R+L +ER+ Y +L
Sbjct: 361 TRLWADLFTRTDFFNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEY-ILI 419
Query: 407 CHPHPGDF-----SDKSKPLY-CSYFMGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAVSMY 459
H + + P Y C +F+GL + V DI+ QA +
Sbjct: 420 AHVNVDSIELDPAEEGQSPRYVCRWFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAAISH 479
Query: 460 TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT--WDSRRALERKVSSHTKPGADD 517
P M++ +V R NL F+ P R + SK S+ + + + +TK +
Sbjct: 480 NNYTPDMRVEARYVKRHNLVKFLTPELARTLKLSKSKEGRKSKTNAQNQSNGNTKKAEES 539
Query: 518 GRKRKQTDDN---VDTH 531
K Q+ +N ++TH
Sbjct: 540 ESKNSQSKENKEKLETH 556
>gi|403220429|dbj|BAM38562.1| polyadenylate polymerase [Theileria orientalis strain Shintoku]
Length = 511
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 186/492 (37%), Positives = 293/492 (59%), Gaps = 18/492 (3%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
S + + GIT P++ GP+ +DL +++L L+ NLYE+ E REEVL L+++++
Sbjct: 7 SVDIKSYGITAPVTTEGPSKEDLKASQELIVLLKSYNLYETDEGKKRREEVLESLNRLLQ 66
Query: 63 IWVKK-ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
+V++ + GL DQ AK+ TFGSYRLG+ P +DID C+ PR TRE FF
Sbjct: 67 QFVRRQVKINMGLTDQEANSVTAKLLTFGSYRLGIVAPDSDIDVACLCPRGITREA-FFS 125
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
+ + LT++ +T+L VPDA+ PV+K + +SID+L++ L + ++++ + IL+
Sbjct: 126 DFYNTLTKVEGITKLQSVPDAYTPVIKLYYHDISIDILFSNLDEPTVDPNINLLDNKILR 185
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N + VRS+NGCRV IL VPK NFRTTLR ++ WA RR +YS V G+LGG+ WA+
Sbjct: 186 NMSDSNVRSINGCRVASFILDSVPKKGNFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAI 245
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNP 296
L AR+CQ+YPN P+ L+ +FF+V++ W W PV LC I+ G + +VWDP +
Sbjct: 246 LTARVCQMYPNFAPNRLIEKFFKVFSMWNWIYPVTLCKIKRESGVPGLMSFKVWDPTNSL 305
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 356
+D+ HLMPIITPA+P MNS++NV+ +T R++ +E R ++ + + W+ + E
Sbjct: 306 QDRQHLMPIITPAFPSMNSTHNVTATTKRVVTEELSRAAQLLKTPNLTNTQL-WEMVLEE 364
Query: 357 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG--DF 414
F YK++L I++ + W+GW+ SR+R L K+E Y Q P PG F
Sbjct: 365 EDVFSKYKHFLVIEVYGSSEHAHNKWEGWIGSRMRFLIKKLETLEYT--QIRPLPGFFKF 422
Query: 415 SDKSKPLYCSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYT---LRKPGMQISV 470
D+ S F K PV EG Q FDIR+ ++ FK+ ++ + K + +++
Sbjct: 423 EDRDWEYASSAFFAF--KHTAPVVEGYQSFDIRMPIQSFKEIINTWCDMETFKDQIDVNI 480
Query: 471 AHVTRRNLPNFV 482
++ + LP+++
Sbjct: 481 RYLKSKQLPDYI 492
>gi|348506632|ref|XP_003440862.1| PREDICTED: poly(A) polymerase alpha-like [Oreochromis niloticus]
Length = 601
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 205/539 (38%), Positives = 311/539 (57%), Gaps = 35/539 (6%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS P +++L++TRKL ++ N+YE+ E RE V RL+ + + W+K+I
Sbjct: 6 GLTGPISEDLPEEENLIQTRKLLDTMKSYNVYENNLEFEHRERVFRRLESLFRDWLKEIC 65
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ + + ++ KIF FGSY LGVH GADID LCVGP R+ FF L
Sbjct: 66 IEMNVPEVVTEKVGGKIFPFGSYHLGVHSKGADIDALCVGPGFLERKA-FFTSFFAKLKA 124
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV ++ + +A+VPV+ + G+ IDL++A LS +P++LD+ +SI+++ D + VR
Sbjct: 125 QKEVKDIQAIEEAYVPVITLSWEGIQIDLVFALLSRRSVPDNLDLLNNSIVKDIDIRCVR 184
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
S NG RVT+QILRLVP + NFR LR ++ WAK+R +YSN GFLGG++WA++VARICQ+
Sbjct: 185 SFNGYRVTEQILRLVPNVLNFRVALRAIKLWAKQRNIYSNKLGFLGGVSWAIMVARICQV 244
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA S LV +FF++++ W WP P+ L +E+ + L WDP+ N D+ HLMPIITPA
Sbjct: 245 YPNATTSTLVIKFFKIFSMWVWPIPIRLIEVEKCNYNLPFWDPKVNQSDRCHLMPIITPA 304
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP N+S NVS STL I+ +E RGH IC+ +E+ +A W LFE FF+ Y++Y +
Sbjct: 305 YPQQNTSVNVSRSTLAILNEEIHRGHAICQEIEQKKA--KWSELFEQTDFFQKYQHYAVL 362
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERH-TYNMLQCHPH--PGDF-SDKSKPLYCSY 425
+ S + W G VES++R L +ER+ ++ HPH PG ++K +
Sbjct: 363 EASYTTEEKCLEWVGLVESKIRLLVSTLERNELVSLAHVHPHAFPGHRKANKKDGQSTMW 422
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
+GL + V + E+F+ ++ +Y GM +SVA + R +L ++
Sbjct: 423 LIGLV----LNVKDSERFN------SLARSSDIY---DEGMSLSVACLRREDL---IYEP 466
Query: 486 GVRPSRPSKGTWDSRRALERKVSSHTKPGADD--GRKRKQTDDNVDTHLRNAKCHATMP 542
R +PS E H P + D G K+++ +T + K ++P
Sbjct: 467 QQRAPQPS----------ETLPPCHVSPVSADKQGTKKRELLHRSETPSKKIKDDKSLP 515
>gi|303388385|ref|XP_003072427.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
gi|303301567|gb|ADM11067.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
Length = 505
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 188/497 (37%), Positives = 303/497 (60%), Gaps = 25/497 (5%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
S + G+T P+S+ T+ ++ + +++ YL++ +E +E +RE VLG+L+ +V+
Sbjct: 4 SERNYKYGVTGPLSMKESTEKEMKLSEEMDMYLQERGFFEDDKEGQTRERVLGKLNFMVR 63
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
+V ++ + +G D + KIFTFGSYRLGVHG G DID LC+ PRH TR DFF
Sbjct: 64 EFVARMGKGRGSGDGE-KAYGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTRN-DFFTH 121
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 182
++ L P + E+ + DA VP++KF+F G+ IDL++ARL++ V+ + +++ D++L++
Sbjct: 122 FYEELKGDPNIKEVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKS 181
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
DE+ + SLNG RVTD++L LVP + F + LRC+++WAKRR VY N G+ GG+ ++L
Sbjct: 182 MDEKCILSLNGSRVTDEMLNLVPNVNTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLC 241
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VAR+CQLYPNA +V +FF +++ W+WP PV+L + + + L+VWDP+ P DKYH
Sbjct: 242 VARVCQLYPNASSFSIVCKFFELFSSWKWPTPVVLRPVVDLNYNLKVWDPKVYPSDKYHR 301
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MP+ITPAYP M +++NVS ST ++ EF R HEI + EKN D+ +F+ FF
Sbjct: 302 MPVITPAYPSMCATHNVSNSTQHVISMEFARAHEILSSPEKN----DFRKIFDLSDFFSR 357
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKS 418
YK + I + + W+G+VES++R L K E ++L P P F +
Sbjct: 358 YKLFAEILAMSTEEEGFPKWEGYVESKVRILASKFE-AVDDILYAIPFPKAFRVAEENIG 416
Query: 419 KPLY--------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISV 470
K Y ++F+ + +PV +G++ + VKEF ++ Y ++ M+I +
Sbjct: 417 KIKYGMQDLKKCTAFFIAIDV---IPV-KGKKVVVEQQVKEFVDFMNEYEGKERSMRIEI 472
Query: 471 AHVTRRNLPNF--VFPG 485
+ ++++ NF VF G
Sbjct: 473 NSLKKKDVQNFLRVFYG 489
>gi|258563094|ref|XP_002582292.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
gi|237907799|gb|EEP82200.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
Length = 616
Score = 368 bits (944), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 183/435 (42%), Positives = 266/435 (61%), Gaps = 25/435 (5%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAV------------ 48
M S ++ G+T PIS PT +L L L+ N +E+ E
Sbjct: 1 MASPQAKQWGVTPPISTVLPTPAELTENDNLIAELKHQNNFEAPSETERRLGTNIPYRFA 60
Query: 49 -----SREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADI 103
R+++L L ++ ++K + R KGL+ + A KIFTFGSYRLGV+GPG+DI
Sbjct: 61 LLNINPRKQILHLLQRVTIEFIKSVGRKKGLSQGAIDAAGGKIFTFGSYRLGVYGPGSDI 120
Query: 104 DTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLY 160
DTL VGP+H TRE DFF + L ++ + +L VPDA VP+MK + SG+SIDL++
Sbjct: 121 DTLVVGPKHVTRE-DFFADFPSTLEQLAPKDSIEKLTSVPDAFVPIMKLELSGISIDLIF 179
Query: 161 ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 220
ARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ W
Sbjct: 180 ARLVVHSVPLNLDLKNKELLRGLDERELRCVNGTRVTDEILELVPQQKTFRLALRAIKLW 239
Query: 221 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI 280
A+ R +YSNV GF GG+ WA+LVAR+CQLYP A S+++ +FFR+ QW WP PVLL I
Sbjct: 240 AQSRAIYSNVVGFPGGVAWAMLVARVCQLYPQATGSVIIGKFFRIMNQWNWPQPVLLKPI 299
Query: 281 EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA 340
E+G L ++VW+P+ D++HLMPIITPAYP M +++N+S ST +++ E +RG +I +
Sbjct: 300 EDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISLSTKAVILRELKRGGDIVDK 359
Query: 341 MEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 399
+ + + W LF +FF YK YL I S+ + W G VES+LR L L ++R
Sbjct: 360 IFMGQ--LRWSDLFAKHSFFSKDYKYYLSITASSTTKEAQSVWSGLVESKLRHLVLALDR 417
Query: 400 HTYNMLQCHPHPGDF 414
+ ++ HP P F
Sbjct: 418 KS-SIEVAHPFPKGF 431
>gi|63101121|gb|AAY33178.1| PAPa [Candida parapsilosis]
gi|354544642|emb|CCE41367.1| hypothetical protein CPAR2_303560 [Candida parapsilosis]
Length = 552
Score = 368 bits (944), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 180/413 (43%), Positives = 269/413 (65%), Gaps = 5/413 (1%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N Q G+T PISL+ PT + L K L+ YES+ + R EVL L ++ + +
Sbjct: 2 NTQSYGVTPPISLSDPTSKEKELNDLLIKELKLRGSYESESATLKRVEVLTTLQKLTEQF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V ++S + ++ + ++A KIFTFGSY+LGV+GP +DID L V PRH TR+ DFF
Sbjct: 62 VYEVSLQRNMSQGMAKDAGGKIFTFGSYKLGVYGPSSDIDALVVVPRHVTRD-DFFTVFE 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L E+ E++ V +A VP++K +F+G+SIDLL+A+L + +P DL + ++L+N D
Sbjct: 121 KILRGRQELEEINCVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNID 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +R+LNG RVTD+ILRLVPK F+ LR ++ WA++R +Y+NV GF GG+ WA+LVA
Sbjct: 181 EKDMRALNGTRVTDEILRLVPKSTVFKNALRFVKMWAQQRAIYANVYGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV ++++ +FF++Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 241 RICQLYPNAVSAVILEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N+++ST +I+M EF RG EI + + W L E FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKIIMSEFDRGVEIMNGVVSGQK--SWSDLLERHDFFHKYK 358
Query: 365 NYL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
YL + + N ++ + G VES+LR L K+E+ + HP+ F +
Sbjct: 359 FYLCVVAATKSNTEEHSKYSGMVESKLRLLVQKLEQ-VEGVELAHPYVKSFEN 410
>gi|320586365|gb|EFW99044.1| pap-like poly(A) polymerase [Grosmannia clavigera kw1407]
Length = 596
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 210/579 (36%), Positives = 327/579 (56%), Gaps = 73/579 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ G+T P+S PT++ +T L + LR +ES E R +VL L + +VK
Sbjct: 5 KQYGVTPPLSTEMPTEEQRRQTDALLEELRQQGTFESTAETQKRFKVLESLRMVADAFVK 64
Query: 67 KISRAKGL-NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREE--DFFGEL 123
++++ K N L ++A AKIFT+GS+RLGV+ PG+DIDTL V P++ +RE+ ++F E+
Sbjct: 65 RVAKEKAPDNPTLFRDACAKIFTYGSFRLGVYMPGSDIDTLVVAPKYVSREDYFNYFPEM 124
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPED--LDISQDSILQ 181
Q +T +T+L PV DA VP++KF+++G+SIDL+++R+ L +P D + ++L+
Sbjct: 125 LQAMTPPGSITDLTPVEDAFVPIIKFEYNGISIDLIFSRVLLTQLPSDDKWGLKDSNLLR 184
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
DE +RS+NG RVTD+IL LVP+ + FR LR ++ WA+RR +Y+N+ GF GG+ WA+
Sbjct: 185 GLDEAELRSVNGTRVTDEILSLVPEQRTFRDALRAIKLWAQRRAIYANIVGFPGGVAWAM 244
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
+VAR+CQLYP A +++VS+FF + +W WPNPVLL IE+G L ++VW+P+ D++H
Sbjct: 245 MVARVCQLYPKATGAVIVSKFFGIILRWPWPNPVLLKPIEDGPLPVRVWNPKVYRGDQFH 304
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
+MPIITPAYP M ++YN+S S+L I+ E +R EI + + W LF TFF
Sbjct: 305 IMPIITPAYPSMCATYNISQSSLSIIKRELERASEISQMIISGRQ--QWKDLFVKHTFFT 362
Query: 362 A-YKNYLRIDISAENADDLRN-WKGWVESRLRQLTLKIERH-------TYNMLQCHPH-- 410
+ YK Y+ + ISA D +N W G+VES++R L +ERH +N H
Sbjct: 363 SDYKYYISV-ISASTEKDAQNTWSGFVESKVRVLVQGLERHESIALARAFNKGYERTHMC 421
Query: 411 -------------------------PGDFSDKSKP------------LYCSYFMGLQRKQ 433
GD +D + P ++++G++ +
Sbjct: 422 KNQADIDAVQNGSLDFMVHKSDEARTGDGADGAAPKDAANSADAIEVFTLTHYIGIELVE 481
Query: 434 GVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRNLPNFVF-PGGVR 488
G + D+ V EFK+ + K + +S+ HV LP+ VF PG V+
Sbjct: 482 G-----AKSLDLSFQVDEFKELCFGWDKYKGKLSDVATLSIQHVRNVTLPDDVFEPGEVK 536
Query: 489 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDN 527
P RP+KG RR + A+ +KR ++DN
Sbjct: 537 PVRPTKGLRQGRR-------NPAAVAANGNKKRIASEDN 568
>gi|302904195|ref|XP_003049022.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729956|gb|EEU43309.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 612
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 190/467 (40%), Positives = 286/467 (61%), Gaps = 28/467 (5%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
+ Q G+T PIS PTD +L T L + L+ +ESQ + REEVL + I
Sbjct: 2 TTDQAYGVTPPISSQLPTDAELRATDALLEELKRQKTFESQADTAKREEVLASIQNIANA 61
Query: 64 WVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
+++++++ K ND L++ A ++FT+GSYRLGV+GPG+DIDTL + P++ TR+ D+F
Sbjct: 62 FIRQVAQEKEPKNDVLIRNARGRVFTYGSYRLGVYGPGSDIDTLIIAPKYVTRD-DYFKY 120
Query: 123 LHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS- 178
+L M +T L V DA VP++KF++SG+SIDL+++R+ +P D +DS
Sbjct: 121 FPDLLVSMAPKDAITGLAVVTDAFVPIIKFEYSGISIDLIFSRIIQKQLPPDFTNLKDSG 180
Query: 179 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 238
+L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 239 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 298
WA+LVAR+CQLYP A PS++V++FF V +QWRWP PVLL IE G L ++VW+PR D
Sbjct: 241 WAMLVARVCQLYPKATPSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPRVYKGD 300
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
+HLMP+ITPAYP M +++N++ S+++++ E R +I E++ + W LF T
Sbjct: 301 SFHLMPVITPAYPSMCATFNITRSSMKVINRELSRALQISESIMVGKR--PWSDLFVKHT 358
Query: 359 FF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML------------ 405
FF + YK Y+ + SA++ +D + W G+VES++R L K+E+H L
Sbjct: 359 FFTQGYKYYISVISSAKSKEDHKIWSGYVESKVRMLVQKLEQHPSIALAHAFNKGYDRHH 418
Query: 406 QCHP--HPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 450
+CH D S C+ +R + PVG+ E L +K
Sbjct: 419 RCHSDQEIAAVQDGSLDYLCT-----ERTEETPVGKSEPAVAELPIK 460
>gi|326484929|gb|EGE08939.1| Poly(A) polymerase PAPalpha [Trichophyton equinum CBS 127.97]
Length = 601
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/418 (42%), Positives = 267/418 (63%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M +S ++ GIT P+S A PT +L L L+ N +E E R++ L L ++
Sbjct: 1 MAASQSRQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
++K +S+ KGL+ + + KIFT+GSYRLGV+GPG+DIDTL V P+H RE DFF
Sbjct: 61 TIEFIKVVSKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMRE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+L + + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+
Sbjct: 120 AHFPTVLEKHAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E +RG ++ + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDLFARH 357
Query: 358 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
+FF A YK YL I+ ++ + + W G VES+LR L ++R + ++ HP P F
Sbjct: 358 SFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 427 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-P 484
+GL+ K P G DI FK + + +PG+ ++++HV +LP+ VF P
Sbjct: 488 IGLELKPLAP-GASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQP 546
Query: 485 GGVRPSRP 492
G VRP+RP
Sbjct: 547 GEVRPTRP 554
>gi|326471772|gb|EGD95781.1| Poly(A) polymerase PAPalpha [Trichophyton tonsurans CBS 112818]
Length = 601
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/418 (42%), Positives = 267/418 (63%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M +S ++ GIT P+S A PT +L L L+ N +E E R++ L L ++
Sbjct: 1 MAASQSRQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
++K +S+ KGL+ + + KIFT+GSYRLGV+GPG+DIDTL V P+H RE DFF
Sbjct: 61 TIEFIKVVSKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMRE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+L + + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+
Sbjct: 120 AHFPTVLEKHAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E +RG ++ + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDLFARH 357
Query: 358 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
+FF A YK YL I+ ++ + + W G VES+LR L ++R + ++ HP P F
Sbjct: 358 SFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 427 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-P 484
+GL+ K P G DI FK + + +PG+ ++++HV +LP+ VF P
Sbjct: 488 IGLELKPLAP-GASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQP 546
Query: 485 GGVRPSRP 492
G VRP+RP
Sbjct: 547 GEVRPTRP 554
>gi|327293141|ref|XP_003231267.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
gi|326466383|gb|EGD91836.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
Length = 601
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/418 (42%), Positives = 267/418 (63%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M +S ++ GIT P+S A PT +L L L+ N +E E R++ L L ++
Sbjct: 1 MAASQSRQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
++K +S+ KGL+ + + KIFT+GSYRLGV+GPG+DIDTL V P+H RE DFF
Sbjct: 61 TIEFIKVVSKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMRE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+L + + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+
Sbjct: 120 AHFPAVLEKHAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E +RG ++ + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDLFARH 357
Query: 358 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
+FF A YK YL I+ ++ + + W G VES+LR L ++R + ++ HP P F
Sbjct: 358 SFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
>gi|158429647|pdb|2Q66|A Chain A, Structure Of Yeast Poly(A) Polymerase With Atp And
Oligo(A)
Length = 525
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/391 (45%), Positives = 261/391 (66%), Gaps = 4/391 (1%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
GIT P+S G T + L + L+ +E+++E +R +VL L ++ + +V ++
Sbjct: 3 FGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEV 62
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S+ K ++D + ++A KIFT+GSYRLGVHGPG+DIDTL V P+H TRE DFF +L
Sbjct: 63 SKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSLLR 121
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
E E+ E+ PVPDA VP++K KFSG+SI L+ ARL +P L +S ++L+N DE+ +
Sbjct: 122 ERKELDEIAPVPDAFVPIIKIKFSGISIALICARLDQPQVPLSLTLSDKNLLRNLDEKDL 181
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQ
Sbjct: 182 RALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQ 241
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H MP+ITP
Sbjct: 242 LYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 301
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF YK YL
Sbjct: 302 AYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKFYLE 359
Query: 369 IDISAENADDLR-NWKGWVESRLRQLTLKIE 398
I +D+ W G VES++R L +K+E
Sbjct: 360 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 390
>gi|149237693|ref|XP_001524723.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
gi|146451320|gb|EDK45576.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
Length = 587
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 184/422 (43%), Positives = 274/422 (64%), Gaps = 8/422 (1%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
S N G+T PISLA PT D L K L+ +ES+ R +VL L ++ +
Sbjct: 2 SMNTPTYGVTPPISLANPTPKDNELNDLLIKELKLRGSFESEAATRKRVKVLNTLQKLTE 61
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
+V +SR+K +++ + ++A K+FTFGSYRLGV+GP +DID L V PR+ TRE DFF E
Sbjct: 62 TFVYNVSRSKNMSEAMARDAGGKLFTFGSYRLGVYGPSSDIDALVVFPRYITRE-DFFTE 120
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 182
++L E PE+ E++ V +A VP++K +F G+SIDL++A+L + IP+DL ++ ++L+N
Sbjct: 121 FEKLLRERPELEEINSVREAFVPIIKLEFDGISIDLIFAKLDIPRIPKDLTLTDKNLLKN 180
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
DE+ +R+LNG RVTD+IL LVPK F+ LR ++ WA++R +Y+NV GF GG+ WA+L
Sbjct: 181 IDEKDLRALNGTRVTDEILNLVPKPTVFKHALRFIKMWAQQRAIYANVYGFPGGVAWAML 240
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VARICQLYPNAV S +V +FF++Y+QW WP PVLL IE+G L ++VW+P+ D+ H
Sbjct: 241 VARICQLYPNAVSSYIVEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPKLYSLDRQHR 300
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MP+ITPAYP M +++N++ ST +I++DEFQRG I + + +W L + FF
Sbjct: 301 MPVITPAYPSMCATHNITASTQKIILDEFQRGTTIMHGIL--DGTKNWLDLLQRHDFFHR 358
Query: 363 YKNYLRIDISAENA-DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 421
YK YL + + ++ ++ + G ES+LR L K+E + HP+ F +
Sbjct: 359 YKFYLCVVAATKSTYEEHLKYSGMFESKLRLLVQKLEM-VPGVELAHPYVKSFENG---Y 414
Query: 422 YC 423
YC
Sbjct: 415 YC 416
>gi|392870480|gb|EAS32287.2| Poly(A) polymerase PAPalpha [Coccidioides immitis RS]
Length = 599
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/418 (43%), Positives = 262/418 (62%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ G T PIS A PT +L L L+ N +E+ E R ++L + ++
Sbjct: 1 MATPQVKQWGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK + R KGL+ + + KIF +GSYRLGV+GPG+DIDTL VGP+H E DFF
Sbjct: 61 TVEFVKTVGRRKGLSQAAIDVSGGKIFAYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ L M + +L PVPDA+VP++K + SG+SIDL++ARL + IP DLD+
Sbjct: 120 LDFPPTLERMAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+ R +YSNV GF GG+
Sbjct: 180 ELLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E +RG +I E + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKH 357
Query: 358 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF YK YL I S+ + + W G VE++LR L + +++ ++ HP P F
Sbjct: 358 TFFSKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKA-SIDVAHPFPKGF 414
>gi|303317852|ref|XP_003068928.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108609|gb|EER26783.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 599
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/418 (43%), Positives = 263/418 (62%), Gaps = 8/418 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M +S ++ G T PIS A PT +L L L+ N +E+ E R ++L + ++
Sbjct: 1 MATSQVKQWGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK + R KGL+ + + KIF +GSYRLGV+GPG+DIDTL VGP+H E DFF
Sbjct: 61 TVEFVKTVGRRKGLSQAAIDVSGGKIFPYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ L + + +L PVPDA+VP++K + SG+SIDL++ARL + IP DLD+
Sbjct: 120 LDFPPTLERLAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+ R +YSNV GF GG+
Sbjct: 180 ELLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E +RG +I E + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKH 357
Query: 358 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF YK YL I S+ + + W G VE++LR L + +++ ++ HP P F
Sbjct: 358 TFFSKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKA-SIEVAHPFPKGF 414
>gi|308510522|ref|XP_003117444.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
gi|308242358|gb|EFO86310.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
Length = 513
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 199/519 (38%), Positives = 297/519 (57%), Gaps = 34/519 (6%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
GI++PIS+ P DL+ + L + L+ N +E EE R +VL +L+ +VK W+ +
Sbjct: 10 FGISQPISMDFPNKKDLLLNKSLTETLKSFNCFEPSEETSQRVKVLNKLNFLVKKWIHLL 69
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ + D +A K+ FGSYRLGVH G+DIDTL + PRH TR DF E
Sbjct: 70 TITRIPMDV---DAGGKLIAFGSYRLGVHSSGSDIDTLVLAPRHVTRL-DFILENFT--- 122
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
A VP+M FK+SG+ IDLL+ARL + +P+++D+S D+IL+N D ++V
Sbjct: 123 -------------AFVPIMTFKYSGIDIDLLFARLDMPTVPDNIDLSDDNILKNLDPESV 169
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCRV +Q+L+ VP F TLR ++ WAK G+YSN GF GGI WA+LVAR CQ
Sbjct: 170 RSLNGCRVAEQLLKQVPNQSTFCETLRAVKLWAKNHGIYSNAIGFFGGIAWAILVARTCQ 229
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE----GSLGLQVWDPRRNPKDKYHLMP 304
LYPNA PS L+ + F V++ W WP+PV+L +E +L VWDPRRN D+ HLMP
Sbjct: 230 LYPNAAPSKLIQKVFFVFSTWNWPSPVILKHMENRFDMQNLSQLVWDPRRNYADRLHLMP 289
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITP++P NS++NVS STL+++ +E + +ICE ++K +A W L E FF Y+
Sbjct: 290 IITPSFPEQNSTHNVSRSTLQVIQNEMKEAFKICEHVQKGKA--TWKDLLEETNFFCKYR 347
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 424
+ + + I+AE + ++ G+ ESR+RQL +ER++ + + F P
Sbjct: 348 HLIAVSINAEKEKEDTDFAGFFESRIRQLVQLLERNSQVQI-AQVNTRKFKAPFSPGKSQ 406
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVF 483
+F+GL+ Q + D+ +K FK+ + K G +QI A+V + L ++
Sbjct: 407 WFIGLEFIQA-----AKNLDLTEEIKRFKKIIGNQAKEKIGTVQIDAAYVKKSKLITYIS 461
Query: 484 PGGVRPSR-PSKGTWDSRRALERKVSSHTKPGADDGRKR 521
++ + K T + RK + T+ G D + R
Sbjct: 462 AAELKRGKFMKKDTSPEKENANRKRPTTTQSGDDVKKPR 500
>gi|268558234|ref|XP_002637107.1| C. briggsae CBR-PAP-1 protein [Caenorhabditis briggsae]
Length = 653
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/406 (46%), Positives = 261/406 (64%), Gaps = 26/406 (6%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+++PIS P D++ T +L L+ N YE +EE R EVL L+++VK WVKK+
Sbjct: 12 LGVSQPISTLRPDQKDIVMTDQLIATLKKFNSYEPKEETEKRMEVLRSLNRLVKEWVKKV 71
Query: 69 SRAK-----GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
+ K G N A K+FTFGSYRLGVH GADIDTL V PRH R DFF
Sbjct: 72 TAIKIPSGEGAN------AGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRT-DFFTSF 124
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
+ML + P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P+ D+ D +L+N
Sbjct: 125 KEMLRQDPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQDLFDDQLLRNL 184
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D+++VRSLNGCRV + +L+LVP+ + F LR ++ WAK G+YSN GF GGI+WA+LV
Sbjct: 185 DQESVRSLNGCRVAELLLKLVPRQKEFCIALRAIKLWAKNHGIYSNSMGFFGGISWAILV 244
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKD 298
AR CQLYPNA S +V R F +++ W WP+PVLL A+++ +L +WDPR+ D
Sbjct: 245 ARACQLYPNASASRIVHRMFFIFSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPRKKNSD 304
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
++HLMPIITPA+P NS++NV+ ST I+ +E G EIC+ + E W+ LF+
Sbjct: 305 RFHLMPIITPAFPEQNSTHNVTRSTCHIIRNEICEGLEICKDI--TEGKATWEDLFKEVK 362
Query: 359 FFEAYKNYLRID----ISAENADDLRNWKGWVESRLRQLTLKIERH 400
FF YK+Y+ I I +L W+ ++ESR+R L +ER+
Sbjct: 363 FFSRYKHYIGISDHGYIHRRRGIEL--WR-FLESRIRLLVQSLERN 405
>gi|154316305|ref|XP_001557474.1| hypothetical protein BC1G_03738 [Botryotinia fuckeliana B05.10]
Length = 544
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/419 (43%), Positives = 268/419 (63%), Gaps = 9/419 (2%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M ++ ++LGIT P+S A PTD + T L + + NL+ES+ + R VL L I
Sbjct: 1 MATAAPRQLGITPPLSTALPTDAEKQATDALIEEMTKENLFESRADTEKRSAVLASLQSI 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+ +VK++ R + L + ++ A +IFT+GS+RLGV+GPG+DIDTL V P++ +REE +F
Sbjct: 61 TEEFVKRVCRKQNLPENIVNNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREE-YF 119
Query: 121 GELHQMLTEM-PE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQ 176
+L EM PE + +L PVP+A VP++KF++SG+SIDL++AR+ + I L ++
Sbjct: 120 ELFPDLLVEMAPEGAIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLND 179
Query: 177 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
D++L DE +RSLNG RVTD IL LVP+ FRT LR ++ WA+RR +Y+N+ GF GG
Sbjct: 180 DNLLTGLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGG 239
Query: 237 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 296
+ WA+LVAR+CQLYP A S ++ +FFR+ +QW+WP PVLL AI+ G L ++VW+PR
Sbjct: 240 VAWAMLVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYK 299
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 356
D YHLMPIITP+YP M +++N++ ST I+ E RG I + + +A W LF
Sbjct: 300 GDGYHLMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKA--SWKDLFVK 357
Query: 357 FTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF + YK YL + ++ + W G VES++R L +E H L HP F
Sbjct: 358 HTFFTKNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVENHESIAL-AHPFNKGF 415
>gi|345563932|gb|EGX46915.1| hypothetical protein AOL_s00097g341 [Arthrobotrys oligospora ATCC
24927]
Length = 1294
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/409 (45%), Positives = 267/409 (65%), Gaps = 15/409 (3%)
Query: 2 GSSNG-----QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGR 56
G+S+G ++ G+T IS + PTD ++ L + L+ +N +ES EE+ R +VL R
Sbjct: 678 GASSGLSQPPRQWGVTPAISHSMPTDQEIKVNNDLIEELKAMNSFESAEESQKRVDVLKR 737
Query: 57 LDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRE 116
L +I + +VK++ +K N+ A K+FT+GSYRLGV GPG+DIDTL V P+ TRE
Sbjct: 738 LQRITEDFVKQVYTSKNQNELATNSAGGKVFTYGSYRLGVVGPGSDIDTLVVAPKLVTRE 797
Query: 117 EDFFGELHQMLTEM-----PEVTE-LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE 170
DFF +L + P++ E L PVPDA VP++KF SG+SIDL++ RL + +P
Sbjct: 798 -DFFKFYPPLLKALNKPNEPQIIEELAPVPDAFVPIIKFVMSGISIDLIFCRLGVTQVPA 856
Query: 171 DLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNV 230
D+ + ++L+ DE+ +RSLNG RVTD+IL LVP F+ LR ++ WAK + +Y NV
Sbjct: 857 DMSLEDKNLLRGLDEKELRSLNGTRVTDEILTLVPAPAVFKHALRAIKIWAKCKAIYGNV 916
Query: 231 AGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVW 290
GF GG+ WA+LVARICQLYP+AV +++VS+FFR+ QW WP PVLL IE+G L ++VW
Sbjct: 917 YGFPGGVAWAMLVARICQLYPSAVSAVIVSKFFRILGQWAWPQPVLLKPIEDGPLNVRVW 976
Query: 291 DPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW 350
+PR P DK HLMPIITPAYP M S++N++ ST ++ E + +I + + + +W
Sbjct: 977 NPRLYPSDKNHLMPIITPAYPSMCSTHNITPSTKAAILGEMAKAADIVDRIITGKG--NW 1034
Query: 351 DTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 398
LFE TFF + YK YL ++ SA+ + W G VES++R L +K+E
Sbjct: 1035 KQLFERHTFFTKDYKYYLAVNASAKEQEASVKWSGLVESKIRHLVMKLE 1083
>gi|341895379|gb|EGT51314.1| hypothetical protein CAEBREN_01393 [Caenorhabditis brenneri]
Length = 1333
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 192/489 (39%), Positives = 292/489 (59%), Gaps = 19/489 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+++PISLA PT DL T L + L+ V +E++EE R +VL L+ VK W++ IS
Sbjct: 822 GVSQPISLAQPTPKDLSLTCSLLQELKSVGSFEAKEETTKRIQVLQFLNATVKKWIQGIS 881
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
A+ N + EA ++ +FGSYRLGVH G DID++ + PR +R DFF L +L
Sbjct: 882 SARLPNGKFF-EAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRT-DFFTSLKDILLR 939
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
P V L+ V A VP+M F+F+GV +DLL+ARL L VIPE +D++ D++L+N D+++VR
Sbjct: 940 NPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVR 999
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WALLVAR CQL
Sbjct: 1000 SLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQL 1059
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHLMPII 306
YPNA PS LV + F V++ W +P+P++LC + D RN D++HLMPII
Sbjct: 1060 YPNATPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWGRNHADRFHLMPII 1119
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPA+P NS++NVS ST+ ++ E IC + E DW LFE F+ YK++
Sbjct: 1120 TPAFPEQNSTHNVSRSTMEVIKKEMADALIICNDV--FEGKCDWKFLFEEVNFYSQYKHF 1177
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSY 425
+ + + A+ + ++ G++ESRLR L ER+ + +P + KS+ L +
Sbjct: 1178 VVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKSQSL---W 1234
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFV 482
F+GL+ + V + D+ + FK +++ + G +++ +++V R L ++
Sbjct: 1235 FIGLEFDEVV-----KNMDLTREIDNFKWNLNVQAKQIAGFEDVELDISYVKRSQLIKYL 1289
Query: 483 FPGGVRPSR 491
++ R
Sbjct: 1290 PAAELKKGR 1298
>gi|347827997|emb|CCD43694.1| similar to Poly(A) polymerase [Botryotinia fuckeliana]
Length = 573
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 183/419 (43%), Positives = 269/419 (64%), Gaps = 9/419 (2%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M ++ ++LGIT P+S A PTD + T L + + NL+ES+ + R VL L I
Sbjct: 1 MATAAPRQLGITPPLSTALPTDAEKQATDALIEEMTKENLFESRADTEKRSAVLASLQSI 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+ +VK++ R + L + ++ A +IFT+GS+RLGV+GPG+DIDTL V P++ +REE +F
Sbjct: 61 TEEFVKRVCRKQNLPENIVNNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREE-YF 119
Query: 121 GELHQMLTEM-PE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQ 176
+L EM PE + +L PVP+A VP++KF++SG+SIDL++AR+ + I L ++
Sbjct: 120 ELFPDLLVEMAPEGAIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLND 179
Query: 177 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
D++L DE +RSLNG RVTD IL LVP+ FRT LR ++ WA+RR +Y+N+ GF GG
Sbjct: 180 DNLLTGLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGG 239
Query: 237 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 296
+ WA+LVAR+CQLYP A S ++ +FFR+ +QW+WP PVLL AI+ G L ++VW+PR
Sbjct: 240 VAWAMLVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYK 299
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 356
D YHLMPIITP+YP M +++N++ ST I+ E RG I + + +A W LF
Sbjct: 300 GDGYHLMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKA--SWKDLFVK 357
Query: 357 FTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF + YK YL + ++ + W G VES++R L +E H ++ HP F
Sbjct: 358 HTFFTKNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVENHE-SIALAHPFNKGF 415
>gi|315043474|ref|XP_003171113.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
gi|311344902|gb|EFR04105.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
Length = 583
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 174/397 (43%), Positives = 257/397 (64%), Gaps = 7/397 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M +S ++ GIT P+S A PT +L L L+ N +E+ E R++ L L ++
Sbjct: 1 MATSQSRQWGITPPLSSALPTPAELTENDALIAELKLQNNFETPSETEKRKQTLHLLQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
++K +S+ KGL+ + + KIFT+GSYRLGV+GPG+DIDTL V P+H RE DFF
Sbjct: 61 TIEFIKVVSKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMRE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+L + + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+
Sbjct: 120 AHFPTVLEKFAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E +RG ++ + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKSVILRELRRGGDMVDKIFVGQR--RWSDLFARH 357
Query: 358 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQL 393
+FF A YK YL I+ ++ + W G VES+LR L
Sbjct: 358 SFFSADYKYYLSINSTSTTKEAQAIWSGLVESKLRHL 394
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 427 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-P 484
+GL+ K P G DI FK + + +PG+ ++++HV +LP+ VF P
Sbjct: 470 IGLELKPLAP-GASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQP 528
Query: 485 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRK 520
G VRP+RP K + E+ VS A DG++
Sbjct: 529 GEVRPTRPKKKV---VKKAEQSVSQKRTIDAVDGQE 561
>gi|429961574|gb|ELA41119.1| hypothetical protein VICG_01818 [Vittaforma corneae ATCC 50505]
Length = 501
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 176/418 (42%), Positives = 267/418 (63%), Gaps = 14/418 (3%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M S+N + GIT P SL T + +++KYLR+ N +ES++ +RE VLGRLD +
Sbjct: 1 MNSAN-PKYGITGPASLKESTQESTQLANQMDKYLRESNFFESEDAGQTRERVLGRLDFL 59
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK +V+K + +Q + KIFTFGSYRLGVH GADID LCV PRH +R+ DFF
Sbjct: 60 VKKFVEKTAPE---GEQ--KNYGGKIFTFGSYRLGVHDRGADIDVLCVVPRHVSRK-DFF 113
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
++ L + V E+ + DA+VP++ + G+ IDL +ARL+L VI E++ + D+IL
Sbjct: 114 TIFYEELGQDENVKEISKIEDAYVPIISLTYDGIPIDLTFARLNLPVIAENISLLNDTIL 173
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
++ DE+ + SLNG RVTD ILRL+P++ F + LR ++FWAKRR +Y N G+ GG+ ++
Sbjct: 174 RSMDEKCILSLNGSRVTDAILRLIPRVDVFHSALRAIKFWAKRRYIYGNAYGYFGGVTFS 233
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+ VARICQ+YPN +V +FF Y+ W+WP PV LC+I + + L+VWDP+ P DKY
Sbjct: 234 ICVARICQMYPNLCAYDIVCKFFETYSSWKWPTPVQLCSIVDHNYNLKVWDPKVYPADKY 293
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MP+ITP YP +NS++NV+ ST ++ E RG+E+ + + LFE FF
Sbjct: 294 HKMPVITPVYPSINSTHNVTQSTFILICSELARGNELM------RSKAPFSKLFEVSGFF 347
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
+ +K ++ + I++E+ W+G+++S++R L K+E + N+ P P F+ +S
Sbjct: 348 KKHKMFIEVRINSEDLQAFNIWEGYIQSKIRILCTKLE-NLENISLAAPFPKAFTGRS 404
>gi|384497599|gb|EIE88090.1| hypothetical protein RO3G_12801 [Rhizopus delemar RA 99-880]
Length = 500
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 186/461 (40%), Positives = 277/461 (60%), Gaps = 43/461 (9%)
Query: 2 GSSNGQRL--GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
+ G +L GIT P+SL GPT+ D+ T++L+K L LY+S+E A RE VL LD+
Sbjct: 3 ATQQGTKLYPGITRPLSLEGPTEYDIHLTKELQKTLMLYGLYDSEETAKLREHVLKSLDE 62
Query: 60 IVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF 119
+ K +V+ + +G + + +A KIFT+GSYRLGV+ ++
Sbjct: 63 MTKKFVQFVYERQGFSKEQAVKAGGKIFTYGSYRLGVNAKASN----------------- 105
Query: 120 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 179
++ ++ PV DA VPV+KFK+SG+ ID + ARL+L I ED+D+ I
Sbjct: 106 -----------EQIKDITPVTDAFVPVIKFKYSGIPIDFVCARLNLEEISEDIDLKDPEI 154
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+ D ++RS+NG RV D IL LVP + FR TLRC++ WA R+ VYSNV GFLGG+ W
Sbjct: 155 LRGLDAHSIRSINGTRVADDILSLVPNMDTFRATLRCIKLWATRKAVYSNVLGFLGGVAW 214
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPK 297
A+LVAR+CQLYP+A S L+S+FF + T W WP+PV+L A+E+G + W+P+ NP
Sbjct: 215 AILVARVCQLYPHASASTLISKFFHILTSWSWPSPVMLKAVEDGPAFANTKPWNPKLNPT 274
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D+ H MP+ITP+YP M +++NV+ ST RI+ E ++ +I + + A W LFE
Sbjct: 275 DRSHRMPVITPSYPSMCTTHNVTQSTQRIITGEIKQAAKIVDKIMAGSA--KWPQLFEAH 332
Query: 358 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
+FF+ Y+ YL+I + A+N + W G VE+RLRQL +K+E ++++Q HP FS+
Sbjct: 333 SFFKMYRQYLQITVVADNYELQLKWTGLVEARLRQLVIKLEA-IHSVMQVHPFMDGFSET 391
Query: 418 SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 458
C Y + V V +GE++D T+ + K V +
Sbjct: 392 -----CLYRTSTDK---VTVSQGEKYDNNRTIGKMKMEVDV 424
>gi|400594797|gb|EJP62626.1| Poly(A) polymerase pla1 [Beauveria bassiana ARSEF 2860]
Length = 593
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 207/556 (37%), Positives = 310/556 (55%), Gaps = 76/556 (13%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYES----QEEAVSREEVLGRLDQ 59
S Q G+T PIS++ PT+++ + L + LR +ES Q+ +R VL L +
Sbjct: 2 SGEQVYGVTPPISVSLPTENEKRISESLIEELRRQKTFESPSDTQKSLSNRHTVLESLQK 61
Query: 60 IVKIWVKKISRAKG-LNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREED 118
I +V+K++R K ND L++ A K+FT+GS+RLGV GPG+DIDTL V P++ TRE D
Sbjct: 62 ITDEFVRKVAREKEPKNDILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRE-D 120
Query: 119 FFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDI 174
+F ++L EM +T+L V DA VP++KF++SG+SIDL+++R+ + P+ D+
Sbjct: 121 YFKYFPELLAEMAPKDSITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDL 180
Query: 175 SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 234
+L+ DE +RSLNG RVTD+IL LVP+ FR LR ++ WA+RR VY N+ GF
Sbjct: 181 KDSGLLRGLDEAELRSLNGTRVTDEILALVPEQSTFRLALRAIKLWAQRRAVYGNIMGFP 240
Query: 235 GGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRR 294
GG+ WA+LVAR+CQLYP A S++V++FF V +QWRWP PVLL IE G L ++VW+P+
Sbjct: 241 GGVAWAMLVARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKV 300
Query: 295 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 354
D +HLMPIITPAYP M +++N++ S++ I+ E QRG EI E + + W+ LF
Sbjct: 301 YKGDSFHLMPIITPAYPSMCATFNITRSSMTIIKRELQRGLEITEQVMVGKQ--SWNDLF 358
Query: 355 EPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 413
TFF YK Y+ + +++ D + W G++ES++R L K+E H + L HP
Sbjct: 359 VKHTFFTTGYKYYISVVSASKARDAHKLWSGYIESKVRMLVQKLEHHPHIAL-AHPFVKG 417
Query: 414 FSDK---------------------------------------------------SKPLY 422
+S + S+
Sbjct: 418 YSRRHLCKDETQIEQVQEGSLDFVVSDDVQLDGESNEQNGEQKEAAEGEAEKQTSSEVFT 477
Query: 423 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 478
++++GL+ ++G + D+ V EFK + + KP + I V HV NL
Sbjct: 478 TTHYIGLELEEG-----AKSLDLSYQVDEFKVLCTAWQKYQDELKPLVSIGVQHVRNFNL 532
Query: 479 PNFVFPGGVRPSRPSK 494
P+ VF G +P K
Sbjct: 533 PDDVF--GADEKKPQK 546
>gi|86171578|ref|XP_966239.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
gi|46361205|emb|CAG25069.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
Length = 631
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 205/559 (36%), Positives = 313/559 (55%), Gaps = 44/559 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+TEPISL P+++D+ R+ + + L+ NL+E + RE VLG ++++ ++ ++S
Sbjct: 83 GVTEPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKLFHEFLIELS 142
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+G++++ + ++TFGSYRLGV P +DID + + P++ TRE FF E + L +
Sbjct: 143 INQGISEEEANNISGNLYTFGSYRLGVITPNSDIDCIFLAPQNLTRE-IFFNEFYLKLQQ 201
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTV 188
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TV
Sbjct: 202 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTV 261
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNG RV D IL VP FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+ICQ
Sbjct: 262 RSLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQ 321
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMP 304
LYPN S L+ +FF+VY+ W W PVLL I+ EG VWDP +N KDK H+MP
Sbjct: 322 LYPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMP 381
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD--------------- 349
IITPA+PCMNS++NV+ T I+++EF+R H I + ME +E ++
Sbjct: 382 IITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYME-DENNIKSSIRMNKLWPNNNVN 440
Query: 350 ---------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
W T+ EP F YK++L I I N +WKGW+ES++R L K+E
Sbjct: 441 NINNSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE-- 498
Query: 401 TYNMLQCHPHPG-DFSDKSKPLYC-SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 458
T N L+ P P F K K YC S+F+ L P F++ +++F
Sbjct: 499 TINELKIRPFPKFYFYKKEKSYYCSSFFIALIFFYKNPYENT--FNLSYAIRDFIDIALN 556
Query: 459 Y--TLRKP-GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGA 515
+ ++ P +I++ + R + F+ ++ +K ++ ++ ++H + G
Sbjct: 557 WPQKVKYPNAFKINIMYQKRSQVLEFLDIVTKEENQKNKQVMENN---DKDETNHNQNGY 613
Query: 516 DDGRKRKQTDDNVDTHLRN 534
+ K KQ D+ D HL N
Sbjct: 614 RNNHKNKQFDE-YDDHLFN 631
>gi|83285836|ref|XP_729897.1| poly(A) polymerase III [Plasmodium yoelii yoelii 17XNL]
gi|23489018|gb|EAA21462.1| poly(A) polymerase III [Plasmodium yoelii yoelii]
Length = 613
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 188/470 (40%), Positives = 275/470 (58%), Gaps = 50/470 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
G+++P+SL PT++DL + + + L+ NL+E+++ RE+VLG ++++ +V
Sbjct: 79 HEYGVSDPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVI 138
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++S +G+N++ +E ++TFGSYRLGV P +DID + + P++ TRE FF E +
Sbjct: 139 ELSINQGINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNITREI-FFNEFYLK 197
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPED-LDISQDSILQNADE 185
L + V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE
Sbjct: 198 LQQDRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCCYTLDNDYILKNLDE 257
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
TVRSLNG RV D IL VP NFR TLR ++ WAKRRG+YSN+ GFLGGI+WALL A+
Sbjct: 258 VTVRSLNGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAK 317
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYH 301
ICQ+YPN S L+ +FFRVY+ W W PVL+ I+ EG +WDP +N KDK H
Sbjct: 318 ICQIYPNYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLH 377
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN-EADVD----------- 349
+MPIITPA+PCMNS++NV+ T I+++EF+R H I M+ N +AD+
Sbjct: 378 IMPIITPAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDSNPDADISQVMEHVNNLMS 437
Query: 350 ----------------------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRN 381
W + EPF F+ YK++L I I N
Sbjct: 438 HGNAININNVGKSGDNENVNIHNNNSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNL 497
Query: 382 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-DKSKPLYC-SYFMGL 429
WKGW+ES++R L K+E T N L+ P P ++ K K YC S+F+ L
Sbjct: 498 WKGWIESKIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545
>gi|68070217|ref|XP_677020.1| poly(A) polymerase PAP [Plasmodium berghei strain ANKA]
gi|56496967|emb|CAH94131.1| poly(A) polymerase PAP, putative [Plasmodium berghei]
Length = 626
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/467 (40%), Positives = 275/467 (58%), Gaps = 50/467 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+++P+SL PT++DL + + + L+ NL+E+++ RE+VLG ++++ +V ++S
Sbjct: 82 GVSDPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIELS 141
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+G+N++ +E ++TFGSYRLGV P +DID + + P++ TRE FF E + L +
Sbjct: 142 INQGINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKLQK 200
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTV 188
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TV
Sbjct: 201 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTV 260
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNG RV D IL VP NFR TLR ++ WAKRRG+YSN+ GFLGGI+WALL A+ICQ
Sbjct: 261 RSLNGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKICQ 320
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMP 304
+YPN S L+ +FFRVY+ W W PVL+ I+ EG +WDP +N KDK H+MP
Sbjct: 321 IYPNYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMP 380
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN-EADVD-------------- 349
IITPA+PCMNS++NV+ T I+++EF+R H I M+ N +AD+
Sbjct: 381 IITPAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDLNPDADIGQVMEHVNNLMSYGN 440
Query: 350 -------------------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 384
W + EPF F+ YK++L I I N WKG
Sbjct: 441 AININNVGKSGDNENVNIHNNSSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKG 500
Query: 385 WVESRLRQLTLKIERHTYNMLQCHPHPGDFS-DKSKPLYC-SYFMGL 429
W+ES++R L K+E T N L+ P P ++ K K YC S+F+ L
Sbjct: 501 WIESKIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545
>gi|156101143|ref|XP_001616265.1| poly(A) polymerase PAP [Plasmodium vivax Sal-1]
gi|148805139|gb|EDL46538.1| poly(A) polymerase PAP, putative [Plasmodium vivax]
Length = 649
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 189/465 (40%), Positives = 275/465 (59%), Gaps = 46/465 (9%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
+ G+++PI+L PT++DL + + + L+ NL+E+++ RE VLG ++++ +V +
Sbjct: 92 KYGVSDPITLNYPTEEDLKKANDVVELLKSYNLFETEQALKKRERVLGMINKLFHEFVVE 151
Query: 68 ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
IS ++G+N++ + + ++TFGSYRLGV P +DID + + P++ TRE FF E + L
Sbjct: 152 ISISQGINEEDAKHIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKL 210
Query: 128 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQ 186
+ V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE
Sbjct: 211 QQDRNVRKLQSLPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEV 270
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRSLNG RV D IL VP +FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+I
Sbjct: 271 TVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKI 330
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-----EGSLGLQVWDPRRNPKDKYH 301
CQLYPN S L+ +FFRVY+ W W PVL+ I +G VWDP +N KDK H
Sbjct: 331 CQLYPNYNVSQLIGKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLH 390
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE-ADVD----------- 349
+MPIITPA+PCMNS++NV+ T I++DEF+R H I ME N A+V
Sbjct: 391 VMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEANPGANVTFVMNQANGIVT 450
Query: 350 -----------------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 386
W + +P F +YK++L I I A N +WKGW+
Sbjct: 451 PVSAPTTSSSTTGSGSIPGSGSMWTNILQPLDLFASYKHFLHIQIMATNELIYNSWKGWI 510
Query: 387 ESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYC-SYFMGL 429
ES++R L K+E T N L+ P+P + K K YC S+F+GL
Sbjct: 511 ESKIRLLFKKLE--TINELKIRPYPKFYVYKKDKFYYCSSFFIGL 553
>gi|226479000|emb|CAX72995.1| poly (A) polymerase beta [Schistosoma japonicum]
Length = 704
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 199/495 (40%), Positives = 283/495 (57%), Gaps = 28/495 (5%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG T +S PT+ DL T++LE L +N++E+QEE R E L RL +I W+++
Sbjct: 12 LGETGALSFKKPTEQDLKDTQELEASLAQLNIFETQEEISQRREALVRLQEISNGWIRQK 71
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ + L + KIFTFGSYRLGV+ GADID+L V PR TREE FF + +L
Sbjct: 72 ALEQNLPTHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITREE-FFSDFQTVLA 130
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS--ILQNADEQ 186
E P V +LH V DA VPV+K KF GV IDLL+A++ IPE+ + +++ +++N DE+
Sbjct: 131 ENPNVEDLHAVVDAFVPVVKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNMDER 190
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
VRS+NG RVT+ IL LV +F+ L+ +R WAKRR VYSN GFLGG++WA+LV+RI
Sbjct: 191 DVRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILVSRI 250
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLMPI 305
CQLYP A PSM+V FF +++QW WP PV L E SL L VWDPR NP D+YHLMPI
Sbjct: 251 CQLYPYATPSMIVYLFFTIFSQWPWPKPVRLRESEYIASLCLPVWDPRLNPSDQYHLMPI 310
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA--MEKNEADVDWDTLFEPFTFFEAY 363
+TP+YP NS+YNV S I+ E ++G + A M K W LFE FF+ Y
Sbjct: 311 LTPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKR----SWSNLFEAAFFFQ-Y 365
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY---NMLQCHPHPGDFSDKSKP 420
++Y+ + + G VESRLR L E + Y + C + +D
Sbjct: 366 RHYVVVIVVGNVKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHINCRAYGKGPNDDDAN 425
Query: 421 LYCSYFMGLQRKQGV-----------PVGEGEQFDIRLT--VKEFKQAVSMYTLRKPGMQ 467
+F+G++ + GE ++ L+ + F++++ L +
Sbjct: 426 FVRKWFIGMEFDRNTNSLTSTVHNSNTAGEKPTLNVDLSENISSFEKSIER-GLSSEDLS 484
Query: 468 ISVAHVTRRNLPNFV 482
++V +V + L F+
Sbjct: 485 VTVKYVKKSQLAQFI 499
>gi|324975490|gb|ADY62673.1| PAPa [Candida orthopsilosis]
Length = 372
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 173/363 (47%), Positives = 245/363 (67%), Gaps = 3/363 (0%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
N Q G+T PISL PT D L K L+ YES+ + R EVL L ++ + +
Sbjct: 2 NNQTYGVTPPISLTDPTSKDKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDF 61
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
V ++S K + + ++A KIFTFGSYRLGV+GP +DID L V PRH TRE DFF
Sbjct: 62 VYEVSLRKNMTQGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTVFE 120
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 184
++L PE+ E++ V +A VP++K +F+G+SIDLL+A+L + +P DL + ++L+N D
Sbjct: 121 KILRGRPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNID 180
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E+ +R+LNG RVTD+ILRLVPK F+ LR ++ WA++R VY+NV GF GG+ WA+LVA
Sbjct: 181 EKDMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVA 240
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 304
RICQLYPNAV ++++ +FF++Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 241 RICQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMP 300
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPAYP M +++N++ ST +I+M+EF RG EI + + W L E +FF YK
Sbjct: 301 VITPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQK--VWSHLLERHSFFHQYK 358
Query: 365 NYL 367
YL
Sbjct: 359 FYL 361
>gi|341895839|gb|EGT51774.1| hypothetical protein CAEBREN_25710 [Caenorhabditis brenneri]
Length = 527
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 197/510 (38%), Positives = 300/510 (58%), Gaps = 25/510 (4%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+++PISLA PT DL T L + L+ +E +EE R +VL L+ VK W++ IS
Sbjct: 16 GVSQPISLAQPTPKDLSLTCSLLQELKSFGSFEEKEETTKRIQVLQFLNATVKKWIQSIS 75
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ N + EA ++ +FGSYRLGVH G DID++ + PR TR DFF L +L
Sbjct: 76 ATRLPNGKFF-EAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVTRS-DFFTSLKDILLR 133
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
P V L+ V A VP+M F+F+GV +DLL+ARL L VIPE +D++ D++L+N D+++VR
Sbjct: 134 NPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVR 193
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WALLVAR CQL
Sbjct: 194 SLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQL 253
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHLMPII 306
YPNA PS LV + F V++ W +P+P++LC + D RN D++HLMPII
Sbjct: 254 YPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLTLDNLCWGRNHADRFHLMPII 313
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPA+P NS++NVS ST+ ++ E IC + E DW LFE F+ YK++
Sbjct: 314 TPAFPEQNSTHNVSRSTMEVIKKEMADALVICN--DVFEGKCDWKHLFEELNFYSQYKHF 371
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSY 425
+ + + A+ + ++ G++ESRLR L ER+ + +P + K++ L +
Sbjct: 372 VVLKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKAQSL---W 428
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFV 482
F+GL+ + V + D+ + FK +++ + PG +++ +++V R L ++
Sbjct: 429 FIGLEFDEVV-----KNMDLTREIDNFKWNLNVQAKQIPGFEDVELDISYVKRSQLIKYL 483
Query: 483 FPGGVRPSR--PSKGTWDSRR----ALERK 506
++ R +KG+ D + L+RK
Sbjct: 484 PAAELKKGRFHVAKGSSDDNKENAGVLKRK 513
>gi|256066067|ref|XP_002570474.1| poly(A) polymerase [Schistosoma mansoni]
gi|350644967|emb|CCD60333.1| poly(A) polymerase, putative [Schistosoma mansoni]
Length = 496
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 188/428 (43%), Positives = 258/428 (60%), Gaps = 10/428 (2%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG T +S PT+ D T++LE L +N++E+QEE R E L RL +I W+++
Sbjct: 16 LGETGALSFKKPTEQDFRDTQELEASLAQLNIFETQEEISQRREALVRLQEISNAWIRQK 75
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ + L + KIFTFGSYRLGV+ GADID+L V PR TREE FF + +L
Sbjct: 76 ALEQNLPAHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITREE-FFSDFQTVLA 134
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS--ILQNADEQ 186
E V +LH V DA VPV+K KF GV IDLL+A++ IPE+ + +++ +++N DE+
Sbjct: 135 ENSNVEDLHAVVDAFVPVLKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNMDER 194
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
VRS+NG RVT+ IL LV +F+ L+ +R WAKRR VYSN GFLGG++WA+LV+RI
Sbjct: 195 DVRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILVSRI 254
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLMPI 305
CQLYP A PSM+V FF +++QW WP PV L E SL L VWDPR NP D+YHLMPI
Sbjct: 255 CQLYPYATPSMIVYLFFTIFSQWPWPKPVRLRECEYIASLCLPVWDPRLNPSDQYHLMPI 314
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 365
+TP+YP NS+YNV S I+ E ++G + A ++ W LFE FF+ Y++
Sbjct: 315 LTPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKG--SWSNLFEAAFFFQ-YRH 371
Query: 366 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY---NMLQCHPHPGDFSDKSKPLY 422
Y+ + + G VESRLR L E + Y + CH + SD
Sbjct: 372 YVVVIVVGNTKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHVNCHAYGKGPSDDDANFV 431
Query: 423 CSYFMGLQ 430
+F+G++
Sbjct: 432 RKWFIGME 439
>gi|346322043|gb|EGX91642.1| Poly(A) polymerase [Cordyceps militaris CM01]
Length = 608
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 183/420 (43%), Positives = 269/420 (64%), Gaps = 10/420 (2%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S Q G+T PIS++ PT+ + + L + LR +ES + +R VL L I
Sbjct: 2 SGEQVYGVTPPISVSLPTEIEKRVSESLIEELRRQKTFESPSDTQNRFTVLESLQIITDE 61
Query: 64 WVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
+VKK++R K ND L++ A K+FT+GS+RLGV GPG+DIDTL V P++ TRE D+F
Sbjct: 62 FVKKVAREKEPKNDILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRE-DYFKY 120
Query: 123 LHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDS 178
+LTEM +T++ V DA VP++KF++SG+SIDL+++R+ + P+ D+
Sbjct: 121 FPDLLTEMAPKDSITDITAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFTDLRDSG 180
Query: 179 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 238
L+ DE +RSLNG RVTD+IL LVP+ FR LR ++ WA+RR VY N+ GF GG+
Sbjct: 181 FLRGLDEAELRSLNGTRVTDEILSLVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVA 240
Query: 239 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 298
WA+LVAR+CQLYP A S++V++FF V +QWRWP PVLL IE G L ++VW+P+ D
Sbjct: 241 WAMLVARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGD 300
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
+HLMPIITPAYP M +++N++ S++ I+ E QRG EI E + + W LF T
Sbjct: 301 SFHLMPIITPAYPSMCATFNITRSSMSIIKRELQRGLEISEQVMVGKQ--PWSDLFVKHT 358
Query: 359 FF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
FF YK Y+ + +++ + + W G++ES++R L K+E+H + L HP+ +S +
Sbjct: 359 FFTTGYKYYISVVSASKAKEPHKLWAGYIESKVRMLVQKLEQHPHIAL-AHPYVKGYSRR 417
>gi|341895922|gb|EGT51857.1| hypothetical protein CAEBREN_12609 [Caenorhabditis brenneri]
Length = 528
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 190/489 (38%), Positives = 291/489 (59%), Gaps = 19/489 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+++PISLA PT DL T L + L+ V +E++EE R +VL L+ VK W++ IS
Sbjct: 17 GVSQPISLAQPTPKDLSLTCSLLQELKSVGSFEAKEETTKRIQVLQFLNATVKKWIQGIS 76
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
A+ N + EA ++ +FGSYRLGVH G DID++ + PR +R DFF L +L
Sbjct: 77 SARLPNGKFF-EAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRT-DFFTSLKDILIR 134
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
P V L+ V A VP+M F+F+GV +DLL+ARL L VIP+ +D++ D++L+N D+++VR
Sbjct: 135 NPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQESVR 194
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WALLVAR CQL
Sbjct: 195 SLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQL 254
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHLMPII 306
YPNA PS LV + F V++ W +P+P++LC + D RN D++HLMPII
Sbjct: 255 YPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERADMLTLDNLCWGRNHADRFHLMPII 314
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPA+P NS++NVS ST+ ++ E IC + + DW LFE F+ YK++
Sbjct: 315 TPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDI--FDGKCDWKFLFEEVNFYSQYKHF 372
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSY 425
+ + + A+ + ++ G++ESR RQL ER+ M +P + K++ L +
Sbjct: 373 VVMKLDAKKEETENSYGGFLESRFRQLIGAFERNRGIKMAHLNPKKCQPTSKAQSL---W 429
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFV 482
F+GL+ V + D+ + FK +++ + G +++ +++ R L ++
Sbjct: 430 FIGLEFDDVV-----KNMDLTREIDNFKWNLNVQAKQIAGFEEVELDISYAKRSQLIKYM 484
Query: 483 FPGGVRPSR 491
P ++ R
Sbjct: 485 PPAELKKGR 493
>gi|389584571|dbj|GAB67303.1| poly(A) polymerase PAP [Plasmodium cynomolgi strain B]
Length = 628
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/438 (42%), Positives = 262/438 (59%), Gaps = 37/438 (8%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
+ G+++PISL PTD+DL R + + L+ NLYE++ RE VLG ++++ +V +
Sbjct: 94 KYGVSDPISLNYPTDEDLKRANDVVELLKSYNLYETEHALKKRERVLGMINKLFHEFVVE 153
Query: 68 ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
IS ++G+N++ + + ++TFGSYRLGV P +DID + + P++ TRE FF E + L
Sbjct: 154 ISISQGINEEDAKYIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKL 212
Query: 128 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQ 186
+ V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE
Sbjct: 213 QQDKNVRKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEV 272
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRSLNG RV D IL VP +FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A++
Sbjct: 273 TVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKV 332
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-----EGSLGLQVWDPRRNPKDKYH 301
CQLYPN S L+ +FFRVY+ W W PVL+ I +G VWDP +N KDK H
Sbjct: 333 CQLYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLH 392
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE-ADVD----------- 349
+MPIITPA+PCMNS++NV+ T I++DEF+R H I ME N A+V
Sbjct: 393 VMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGIVT 452
Query: 350 ----------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 393
W + +P F YK++L I I A N +WKGW+ES++R L
Sbjct: 453 PVSTPSSNSSSSSSSIWTNILQPLDLFATYKHFLHIQIMATNELIYNSWKGWIESKIRLL 512
Query: 394 TLKIERHTYNMLQCHPHP 411
K+E T N L+ P+P
Sbjct: 513 FKKLE--TINELRIRPYP 528
>gi|221057822|ref|XP_002261419.1| putative poly(a) polymerase pap (poly(a) polymerase pap [Plasmodium
knowlesi strain H]
gi|194247424|emb|CAQ40824.1| putative poly(a) polymerase pap (poly(a) polymerase pap, putative
[Plasmodium knowlesi strain H]
Length = 637
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 189/458 (41%), Positives = 272/458 (59%), Gaps = 39/458 (8%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK 67
+ G+++PISL PT++DL + + + L+ NLYE++ RE VLG ++++ +V +
Sbjct: 89 KYGVSDPISLNYPTEEDLRKGNDVVELLKSYNLYETEHALKKRERVLGMINKLFHEFVVE 148
Query: 68 ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
IS ++G+N++ + + ++TFGSYRLGV P +DID + + P++ TRE FF E + L
Sbjct: 149 ISISQGINEEDAKHIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKL 207
Query: 128 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQ 186
+ V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE
Sbjct: 208 QQDKNVRKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEV 267
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
TVRSLNG RV D IL VP +FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+I
Sbjct: 268 TVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKI 327
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-----EGSLGLQVWDPRRNPKDKYH 301
CQLYPN S L+ +FFRVY+ W W PVL+ I +G VWDP +N KDK H
Sbjct: 328 CQLYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNNVDGLRNFSVWDPEKNIKDKLH 387
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE-ADVD----------- 349
+MPIITPA+PCMNS++NV+ T I++DEF+R H I ME N A+V
Sbjct: 388 VMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGVVT 447
Query: 350 ----------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 393
W + +P F YK++L I I A + +WKGW+ES++R L
Sbjct: 448 PVSAPSSSTTSSSSNIWTNILQPLDLFGTYKHFLHIQIMATSELIYNSWKGWIESKIRLL 507
Query: 394 TLKIERHTYNMLQCHPHPGDF-SDKSKPLYC-SYFMGL 429
K+E T N L+ P+P + K K YC S+F+ L
Sbjct: 508 FKKLE--TINELKIRPYPKFYVYQKDKFDYCSSFFIAL 543
>gi|310798369|gb|EFQ33262.1| hypothetical protein GLRG_08406 [Glomerella graminicola M1.001]
Length = 631
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 175/402 (43%), Positives = 265/402 (65%), Gaps = 13/402 (3%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSR----EEVLGRLDQIVKIW 64
LG+T PISLA PT+ + + L LR N +ES + R E VL L +I +
Sbjct: 8 LGVTPPISLALPTEAENHAMQTLIDELRRQNTFESPTDTEKRQALSETVLEHLARICDEF 67
Query: 65 VKKISRAKGL-NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGEL 123
VK+++R + ND L+++A KIFT+GSYRLGV+GPG+DIDTL V P++ TR D+F
Sbjct: 68 VKRVARKREEGNDALIRDARGKIFTYGSYRLGVYGPGSDIDTLVVAPKYVTRA-DYFEIF 126
Query: 124 HQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQDSI 179
+L EM +T++ V DA VP++KF+FSG+SIDL+++R++ L +P+D ++ +
Sbjct: 127 PDLLKEMAPPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQLPKDFNVQDSGL 186
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR +Y+N+ GF GG+ W
Sbjct: 187 LRGLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVAW 246
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
A+LVAR+CQLYP A S++V++FF + +W WP PVLL +E G L ++VW+P+ D+
Sbjct: 247 AMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKHVEGGPLQVRVWNPKLYKGDQ 306
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
+HLMP+ITPAYP M ++YN++ S + ++ E QRG +I +A+ + W LF TF
Sbjct: 307 FHLMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRS--PWSDLFVKHTF 364
Query: 360 F-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
F + YK Y+ + S+ + + + W G+VES++R L +E+H
Sbjct: 365 FTQGYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQH 406
>gi|342870120|gb|EGU73417.1| hypothetical protein FOXB_16055 [Fusarium oxysporum Fo5176]
Length = 635
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 172/399 (43%), Positives = 263/399 (65%), Gaps = 7/399 (1%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
Q G+T PIS+ PT+ +L ++ L + L+ +ES E REEVL + I +V+
Sbjct: 5 QAYGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQTICDAFVR 64
Query: 67 KISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREE--DFFGEL 123
++++ K N+ L++ A K+FT+GSYRLGV+GPG+DIDTL V P++ TRE+ FF +L
Sbjct: 65 RVAQEKEPKNEVLIRNARGKVFTYGSYRLGVYGPGSDIDTLIVAPKYVTREDYFKFFPDL 124
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAR-LSLWVIPEDLDISQDSILQN 182
+ +T++ V DA VP++KF++SG+SIDL+++R + + P+ D+ +L+
Sbjct: 125 LLSMAPKDAITDMAVVTDAFVPIIKFEYSGISIDLIFSRVIQKQLSPDFKDLKDSGLLRG 184
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+ WA+L
Sbjct: 185 LDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAML 244
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VAR+CQLYP A S++V++FF V +QWRWP PVLL IE G L +++W+P+ D YHL
Sbjct: 245 VARVCQLYPKATFSVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRIWNPKLYKGDTYHL 304
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MP+ITPAYP M +++N++ S++ I+ E +R +I E++ + W LF TFF A
Sbjct: 305 MPVITPAYPSMCATFNITRSSMAIINRELKRALQISESIMVGKR--PWSDLFVKHTFFTA 362
Query: 363 -YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
YK Y+ + +A+ + W G+VES++R L K+E+H
Sbjct: 363 GYKYYISVTSAAKTKEAHTIWSGYVESKVRMLVQKLEQH 401
>gi|406868090|gb|EKD21127.1| Poly(A) polymerase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 579
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 181/405 (44%), Positives = 263/405 (64%), Gaps = 6/405 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + + LG+T P++ A PT D +L L+ N YE+ EE R VL L I
Sbjct: 1 MATPYAKALGVTPPLTSAAPTAADEAANDELISELKRQNNYETPEETAKRSAVLKSLQAI 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREE--D 118
+ +V++++RA+G + ++ A KI TFGS++LGV GPG+DIDTL V P++ T+ E
Sbjct: 61 TEEFVRQVTRAQGSAESAVKSAGGKIETFGSFKLGVIGPGSDIDTLVVVPKNITKAEFFQ 120
Query: 119 FFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQD 177
FF E+ + T +TEL PDA+VP++ FKFSGV IDLL+ R+ SL IP+DL ++
Sbjct: 121 FFPEIMEKSTPPGTITELMSKPDAYVPILTFKFSGVDIDLLFGRIASLNQIPKDLKMTDH 180
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ +EQ RSLNG RV D++L LVP+ + FRT LR ++ W+ RRG+ N+ GF GG+
Sbjct: 181 DLLRGLEEQEARSLNGVRVADEMLTLVPQTKVFRTALRTIKLWSARRGIVGNIYGFPGGV 240
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S +V +FF++ +W+WP PVLL IE G+L LQVW+P+ N
Sbjct: 241 AWAILVARVCQLYPKATGSTIVMKFFKIIDKWQWPQPVLLKNIETGTLNLQVWNPQINHT 300
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D+ H+MPIITPAYP M +++NV+ ST+ ++ E +RG EI + + +A W LFE
Sbjct: 301 DRRHIMPIITPAYPSMCTTHNVTRSTMAVIHKELKRGGEIADRVMMGKA--KWKDLFEKH 358
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT 401
TFF +YK YL I ++ +++ W G+VES++R L K+ T
Sbjct: 359 TFFTSSYKYYLCIITASTSSEAQTKWAGFVESKVRLLVGKLTEQT 403
>gi|46122023|ref|XP_385565.1| hypothetical protein FG05389.1 [Gibberella zeae PH-1]
Length = 624
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 266/412 (64%), Gaps = 10/412 (2%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
++ Q G+T PIS+ PT+ +L ++ L + L+ +ES E REEVL + I
Sbjct: 2 ASDQAFGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQIICDA 61
Query: 64 WVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
+V++++ K N+ L++ A ++FT+GSYRLGV+GPG+DIDTL V PR+ TRE D+F
Sbjct: 62 FVRRVAEEKEPKNEVLVRNARGRVFTYGSYRLGVYGPGSDIDTLIVAPRYVTRE-DYFKY 120
Query: 123 LHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDS 178
+L M +T++ V DA VP++KF++ G+SIDL+++R+ + P+ D+
Sbjct: 121 FPDLLVSMAPKDAITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSG 180
Query: 179 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 238
+L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 239 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 298
WA+LVAR+CQLYP A P+++V++FF V +QWRWP PVLL IE G L ++VW+P+ D
Sbjct: 241 WAMLVARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGD 300
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
+HLMP+ITPAYP M +++N++ S++ I+ E +R +I E++ W LF +
Sbjct: 301 TFHLMPVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMR--PWSDLFAKHS 358
Query: 359 FFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 409
FF A YK Y+ + +A+ + W G+VES++R L K+E+H L HP
Sbjct: 359 FFTAGYKYYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIAL-AHP 409
>gi|294939386|ref|XP_002782444.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239894050|gb|EER14239.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 293/505 (58%), Gaps = 32/505 (6%)
Query: 11 ITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISR 70
I PIS AGPT DL + + ++L S+E+ RE+ L L+ ++ W+ ++
Sbjct: 18 IWAPISEAGPTVADLKQNEGMLEFLTTAAPEASKEDREKREKALRVLEGVIGDWLTEVGV 77
Query: 71 AKGLN--DQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+G+ + Q N K+FTFGS+RLG+ P +DID LCV PRH TRE FFG L L
Sbjct: 78 QQGMTAENARKQSNNGKLFTFGSHRLGLISPSSDIDCLCVAPRHVTREA-FFGSLVGKLQ 136
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+M EV + PVPDA+ P++K V IDLL+ARL+L D+ D +L+N D+++V
Sbjct: 137 QMDEVETVTPVPDAYAPIIKLICCEVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSV 196
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
R +NG RV D IL+LVP FR LR ++ WAKRRG+Y+N+ GF GGI WA+LVAR+CQ
Sbjct: 197 RCVNGTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQ 256
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEGSLGLQVWDPRRNPKDKYHLMP 304
++PN LV RFF + ++W W NPV LC I E G + +VW+P++ D+ HLMP
Sbjct: 257 MFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQYASDRSHLMP 316
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
+ITPA+P MNS+YNV+ +T RI+M E +R H++ + K E VDW+ L F FF Y
Sbjct: 317 VITPAFPSMNSTYNVTETTKRIIMGEIERAHKL--TLPKKE-QVDWELLCHKFPFFCNYL 373
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP--------GDFSD 416
Y++I +SA ++ R +KG+VESRLR L +E +T + P P G+ +
Sbjct: 374 YYVQIRVSALSSTAYRKYKGFVESRLRLLVRMLE-NTPGIKSVRPWPEEMPYVVDGEVRE 432
Query: 417 KSKPLYCSYFMGLQ--RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP---GMQISVA 471
S C +++GL + + G+ D+R F ++ ++ + ++ +A
Sbjct: 433 NS----CCWYIGLDFPKLSSMAAGQTVTCDLRNCTSGFFDRINEWSEKDTYHGQFEMDIA 488
Query: 472 HVTRRNLPNFVFPGGVRPSRPSKGT 496
+++R LP + V+ PS T
Sbjct: 489 YISRPKLPEHL----VKDQSPSTDT 509
>gi|341899970|gb|EGT55905.1| hypothetical protein CAEBREN_16296 [Caenorhabditis brenneri]
Length = 526
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 191/489 (39%), Positives = 293/489 (59%), Gaps = 19/489 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+++PISLA PT DL T L + L+ +E++EE R +VL L+ VK W++ IS
Sbjct: 15 GVSQPISLANPTPQDLSLTCSLLQELKSFGSFEAKEETTKRIQVLQFLNVTVKKWIQGIS 74
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
A+ N + EA ++ +FGSYRLGVH G DID++ + PR TR DFF L +L
Sbjct: 75 AARLPNGKFF-EAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVTRT-DFFTSLKDILIR 132
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
P V L+ V A VP+M F+F+GV +DLL+ARL L VIP+ +D++ D++L+N D+++VR
Sbjct: 133 NPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQKSVR 192
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WA+LVAR CQL
Sbjct: 193 SLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVARTCQL 252
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCA-IEEGS--LGLQVWDPRRNPKDKYHLMPII 306
YPNA PS LV + F V++ W +P+P++LC E S L L RN D++HLMPII
Sbjct: 253 YPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERSDMLALDNLCWGRNHADRFHLMPII 312
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPA+P NS++NVS ST+ ++ E IC + E DW LFE F+ YK++
Sbjct: 313 TPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDI--FEGKSDWKFLFEEVNFYSQYKHF 370
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSY 425
+ + + A+ + ++ G++ESRLR L ER+ + +P + K++ + +
Sbjct: 371 VVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKAQSI---W 427
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFV 482
F+GL+ + V + D+ + FK +++ + G +++ +++V R L ++
Sbjct: 428 FIGLEFDEVV-----KNMDLTREIDNFKWNLNVQAKQIAGFEEVELDISYVKRSQLIKYL 482
Query: 483 FPGGVRPSR 491
++ R
Sbjct: 483 PAAELKKGR 491
>gi|380471549|emb|CCF47226.1| hypothetical protein CH063_04087 [Colletotrichum higginsianum]
Length = 619
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/409 (43%), Positives = 269/409 (65%), Gaps = 15/409 (3%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYES----QEEAVSREEVLGRLD 58
+S + LG+T PIS A PT+ + + L LR N +ES Q+ + E+VL L
Sbjct: 2 ASEERPLGVTPPISSALPTEAENHAMQTLIDELRRQNTFESPADTQKRQMPSEKVLEHLA 61
Query: 59 QIVKIWVKKISRA--KGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRE 116
+I +VK+++R KG ND L+++A KIFT+GSYRLGV+GPG+DIDTL V P++ TR
Sbjct: 62 RICDEFVKRVAREREKG-NDALIRDARGKIFTYGSYRLGVYGPGSDIDTLVVAPKYVTRA 120
Query: 117 EDFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDL 172
D+F +L EM +T++ V DA VP++KF+FSG+SIDL+++R++ L +P+D
Sbjct: 121 -DYFEIFPDLLKEMAPPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQLPKDF 179
Query: 173 DISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAG 232
++ +L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR +Y+N+ G
Sbjct: 180 NVQDSGLLRGLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMG 239
Query: 233 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP 292
F GG+ WA+LVAR+CQLYP A S++V++FF + +W WP PVLL +E G L ++VW+P
Sbjct: 240 FPGGVAWAMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKQVEGGPLQVRVWNP 299
Query: 293 RRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDT 352
+ D++HLMP+ITPAYP M ++YN++ S + ++ E QRG +I +A+ W
Sbjct: 300 KLYKGDQFHLMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRN--PWSD 357
Query: 353 LFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
LF TFF + YK Y+ + S+ + + + W G+VES++R L +E+H
Sbjct: 358 LFVKHTFFTQGYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQH 406
>gi|341899942|gb|EGT55877.1| hypothetical protein CAEBREN_08096 [Caenorhabditis brenneri]
Length = 528
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 188/489 (38%), Positives = 292/489 (59%), Gaps = 19/489 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+++PISLA PT D+ T L + L+ +E++EE R +VL L+ VK W++ IS
Sbjct: 17 GVSQPISLAQPTPKDISLTCSLLQELKSFGSFEAKEETTKRIQVLQFLNATVKKWIQGIS 76
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
++ N + EA ++ +FGSYRLGVH G DID++ + PR +R DFF L +L
Sbjct: 77 ASRLPNGKFF-EAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRA-DFFTSLKDILIR 134
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
P V L+ V A VP+M F+F+GV +DLL+ARL L VIPE +D++ D++L+N D+++VR
Sbjct: 135 NPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVR 194
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WA+LVAR CQL
Sbjct: 195 SLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVARACQL 254
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHLMPII 306
YPNA PS LV + F V++ W +P+P++LC + D RN D++HLMPII
Sbjct: 255 YPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWGRNHADRFHLMPII 314
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TPA+P NS++NVS ST+ ++ E IC + E DW LFE F+ YK++
Sbjct: 315 TPAFPEQNSTHNVSRSTMEVIKKEMTDALTICN--DVFEGKCDWKHLFEEVNFYSQYKHF 372
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSY 425
+ + + A+ + ++ G++ESRLR L ER+ + +P + KS+ L +
Sbjct: 373 VVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKSQSL---W 429
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFV 482
F+GL+ + V + D+ + FK +++ + G +++ +++V R +L ++
Sbjct: 430 FIGLEFDEVV-----KNMDLTREINNFKWNLNVQAKQIAGFEDVELDISYVKRSHLIKYL 484
Query: 483 FPGGVRPSR 491
++ R
Sbjct: 485 PAAELKKGR 493
>gi|325190732|emb|CCA25225.1| predicted protein putative [Albugo laibachii Nc14]
Length = 539
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/502 (37%), Positives = 288/502 (57%), Gaps = 13/502 (2%)
Query: 35 LRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRL 94
L+D+ L+E +SRE VL ++D+I+K + + +G+ + ++ ++ TFGSYRL
Sbjct: 31 LKDLQLFEDGNRLMSRELVLKKVDKILKEFALHEAINEGIEEMQAKKLRIQLKTFGSYRL 90
Query: 95 GVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGV 154
G H P ADID LC+ PRH TR + FF +L +L V++LH +P+A VPV+KFK G+
Sbjct: 91 GCHHPDADIDVLCLAPRHCTRVK-FFQKLPILLEVSSFVSDLHVIPNAFVPVIKFKVDGI 149
Query: 155 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 214
++D+L++ L L IPE ++I D L D+ +VRSLNGCRVT++IL+L+ + FR TL
Sbjct: 150 AVDMLFSCLYLESIPEHINILDDQFLNGLDDVSVRSLNGCRVTEKILQLISHQEYFRITL 209
Query: 215 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 274
+++WA+ RG+YSNV GFLGG+N A++ A++CQLYP+A+P L+ +FF +Y W WPNP
Sbjct: 210 TAIKYWARNRGIYSNVLGFLGGVNLAIMAAKVCQLYPDALPPTLLIKFFHLYHLWNWPNP 269
Query: 275 VLLC-AIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 333
+ + I LG W+P+ PKD+ HLMPIITP YP +NSSYNV +STL +M EF+
Sbjct: 270 LSITPCINPLQLGFPSWNPKVYPKDRLHLMPIITPCYPSINSSYNVMSSTLDVMKTEFKN 329
Query: 334 GHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 393
+ + W L +FF+ Y+++L++ IS+E+ +D W WVESRLR
Sbjct: 330 AS--LQVSNVRAKVLSWSELLTEASFFDKYRHFLQVQISSEDEEDFGRWVTWVESRLRTF 387
Query: 394 TLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF---MGLQRKQGVPVGEGE---QFDIRL 447
+++E + ++ +F + K Y S+F + QR + E D
Sbjct: 388 FIRLEAIPFVRIRPFARFFNFQEL-KGAYISWFFVALDFQRPEDKRQNAQEPELTIDFSD 446
Query: 448 TVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKV 507
V+ F V + R M + V HV R +P +V R KG R+A + +
Sbjct: 447 AVRAFANHVDQWEERNSTMDLEVKHVVRSQIPAWVIDATYRNFATVKGL--IRKAEQYRY 504
Query: 508 SSHTKPGADDGRKRKQTDDNVD 529
S+ T + D +++
Sbjct: 505 SAATPANGEATSSSNFCDSDIE 526
>gi|322709453|gb|EFZ01029.1| Poly(A) polymerase [Metarhizium anisopliae ARSEF 23]
Length = 572
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/403 (44%), Positives = 264/403 (65%), Gaps = 9/403 (2%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S+ Q G+T PIS+ PT+ + + L + LR +ES + R +VL L I
Sbjct: 2 SSDQVFGVTPPISVGLPTEAEKRASDALIEELRRQKTFESPSDTQKRYKVLESLQAICDE 61
Query: 64 WVKKISRAKG-LNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF--F 120
+VK+++R K ND L++ A K+FT+GS+RLGV GPG+DIDTL V P++ TRE+ F F
Sbjct: 62 FVKRVAREKEPKNDVLIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTREDYFKYF 121
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS-I 179
+L + + +T+L V DA VP++KF++SG+SIDL+++R+ + D QDS +
Sbjct: 122 PDLLEAMAPKGAITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLQDSGL 181
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY N+ GF GG+ W
Sbjct: 182 LRGLDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAW 241
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
A+LVAR+CQLYP A S++V++FF V +QWRWP PVLL IE G L ++VW+P+ D
Sbjct: 242 AMLVARVCQLYPKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDS 301
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
+HLMP+ITPAYP M +++N+S S++ I+ E +RG EI E++ + W LF TF
Sbjct: 302 FHLMPVITPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKR--PWSDLFVKHTF 359
Query: 360 FEA-YKNYLRIDISAENADDLRN-WKGWVESRLRQLTLKIERH 400
F + YK Y+ + ISA + + N W G+VES++R L K+E+H
Sbjct: 360 FTSDYKYYISV-ISASKSKEAHNVWSGYVESKVRMLVQKLEQH 401
>gi|408391167|gb|EKJ70549.1| hypothetical protein FPSE_09302 [Fusarium pseudograminearum CS3096]
Length = 711
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 173/412 (41%), Positives = 267/412 (64%), Gaps = 10/412 (2%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
++ Q G+T PIS+ PT+ +L ++ L + L+ +ES E REEVL + I
Sbjct: 2 ASDQAFGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQIICDA 61
Query: 64 WVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
+V++++ K N+ L++ A ++FT+GSYRLGV+GPG+DIDTL V PR+ TRE D+F
Sbjct: 62 FVRRVAEEKEPKNEVLVRNARGRVFTYGSYRLGVYGPGSDIDTLIVAPRYVTRE-DYFKY 120
Query: 123 LHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDS 178
+L M +T++ V DA VP++KF++ G+SIDL+++R+ + P+ D+
Sbjct: 121 FPDLLVSMAPKDAITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSG 180
Query: 179 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 238
+L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 239 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 298
WA+LVAR+CQLYP A P+++V++FF V +QWRWP PVLL IE G L ++VW+P+ D
Sbjct: 241 WAMLVARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGD 300
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
+HLMP+ITPAYP M +++N++ S++ I+ E +R +I E++ W LF +
Sbjct: 301 TFHLMPVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMR--PWSDLFAKHS 358
Query: 359 FFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 409
FF A YK Y+ + +A+ + W G+VES++R L K+E+H ++ HP
Sbjct: 359 FFTAGYKYYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQ-SIALAHP 409
>gi|322695698|gb|EFY87502.1| Poly(A) polymerase [Metarhizium acridum CQMa 102]
Length = 570
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 178/403 (44%), Positives = 264/403 (65%), Gaps = 9/403 (2%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
S+ Q G+T PIS+ PT+ + + L + LR +ES + R +VL L I
Sbjct: 2 SSDQVFGVTPPISVGLPTEAEKRASDALIEELRRQKTFESPSDTQKRFKVLESLQAICDE 61
Query: 64 WVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF--F 120
+VK+++R K ND L++ A K+FT+GS+RLGV GPG+DIDTL V P++ TR++ F F
Sbjct: 62 FVKRVAREKEPKNDVLIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRDDYFKYF 121
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSI 179
+L + + +T+L V DA VP++KF++SG+SIDL+++R+ + P+ D+ +
Sbjct: 122 PDLLEAMAPKGAITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGL 181
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY N+ GF GG+ W
Sbjct: 182 LRGLDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAW 241
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
A+LVAR+CQLYP A S++V++FF V +QWRWP PVLL IE G L ++VW+P+ D
Sbjct: 242 AMLVARVCQLYPKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDS 301
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
+HLMP+ITPAYP M +++N+S S++ I+ E +RG EI E++ + W LF TF
Sbjct: 302 FHLMPVITPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKQ--PWSDLFVKHTF 359
Query: 360 FEA-YKNYLRIDISAENADDLRN-WKGWVESRLRQLTLKIERH 400
F + YK Y+ + ISA + + N W G+VES++R L K+E+H
Sbjct: 360 FTSDYKYYISV-ISASKSKEAHNVWSGYVESKVRMLVQKLEQH 401
>gi|340514098|gb|EGR44367.1| predicted protein [Trichoderma reesei QM6a]
Length = 620
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 175/400 (43%), Positives = 262/400 (65%), Gaps = 9/400 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
Q G+T PIS+ PT+ + + L + LR +ES + R VL L +I +V+
Sbjct: 5 QNYGVTPPISVTLPTEAENRASDALLEELRRQKTFESPSDTEKRHAVLKSLQEICNEFVR 64
Query: 67 KISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
K++R + ND L++ A K+FT+GS+RLGV+GPG+DIDTL V P++ TRE D+F
Sbjct: 65 KVAREREPKNDILIKNARGKVFTYGSFRLGVYGPGSDIDTLIVAPKYVTRE-DYFNYFPD 123
Query: 126 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS-ILQ 181
+L M +T+L V DA VP++KF++SG+SIDL+++R+ I D D +DS +L+
Sbjct: 124 LLVSMAPPGAITDLTVVKDAFVPIIKFEYSGISIDLIFSRIIQKQISPDFDSLKDSSLLR 183
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
DE +RSLNG RVTD+IL LVP+ FR LR ++ WA+RR VY+N+ GF GG+ WA+
Sbjct: 184 GLDEAELRSLNGTRVTDEILDLVPEKSTFRLALRAIKLWAQRRAVYANIMGFPGGVAWAM 243
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR+CQLYP A S++V++FF V QWRWP PVLL I+ G L ++VW+P+ D +H
Sbjct: 244 LVARVCQLYPKATMSVIVNKFFLVIGQWRWPQPVLLKPIDSGPLPVRVWNPKVYKGDSFH 303
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
LMP+ITPAYP M +++N++ S++ I+ E +RG EI E + + W LF TFF
Sbjct: 304 LMPVITPAYPSMCATFNITRSSMTIIQRELRRGLEISEQIMVGKR--PWSDLFVKHTFFT 361
Query: 362 A-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
+ Y+ Y+ + ++++ + + W G+VES++R L K+E+H
Sbjct: 362 SGYRYYISVISASKDKEAHKIWSGYVESKVRMLVQKLEQH 401
>gi|407919057|gb|EKG12314.1| hypothetical protein MPH_10619 [Macrophomina phaseolina MS6]
Length = 590
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 173/405 (42%), Positives = 257/405 (63%), Gaps = 11/405 (2%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + +R G+T+PIS A PTD +L L LR N +E+ EE R L L +
Sbjct: 1 MAGQSNRRWGVTDPISRAPPTDAELALDATLLDELRSQNTFEAPEETEKRGAALQTLQKA 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
V+ +V+ + + KGL ++ A KI TFGSYRLGV+GPG+DIDTL + P+H TR+ DFF
Sbjct: 61 VEEFVRHVGQVKGLAPSVIDNAGGKICTFGSYRLGVYGPGSDIDTLVLAPKHVTRD-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+L + + + PVPDA P++K F G+ IDL++ARL++ +P DLD+ +
Sbjct: 120 AHFINVLERVAPSGAIEKFSPVPDAFTPIIKMDFMGIDIDLIFARLAIASVPLDLDLKDN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
S+L+ DE +RS+NG RVTD++L LVP+ + FR R ++ WA+RR +Y+N+ GF GGI
Sbjct: 180 SLLRGLDETDLRSVNGTRVTDEVLSLVPQPKIFRQVTRAVKLWAQRRAIYANIVGFPGGI 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA++VARICQLYP A ++++ RFF + + W WP P++L IE+G L ++VW+P+ P
Sbjct: 240 AWAMMVARICQLYPMACAAVVLGRFFYLMSTWPWPRPIMLKEIEDGPLQVRVWNPQIYPG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAM--EKNEADVDWDTLFE 355
DK HLMPIITPAYP M +++N++ ST +++ E R +I + EK W LF+
Sbjct: 300 DKRHLMPIITPAYPSMCATHNITHSTQKVIKRELLRASQITSDILSEKRR----WRDLFD 355
Query: 356 PFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 399
TFF + +K YL I ++ + + NW VES++R+L IE+
Sbjct: 356 RHTFFTQDFKYYLSIVAASHDKEAQDNWSSSVESKVRKLVGLIEQ 400
>gi|398390670|ref|XP_003848795.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
gi|339468671|gb|EGP83771.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
Length = 559
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 173/403 (42%), Positives = 259/403 (64%), Gaps = 7/403 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + + G++ PIS P DL + L + L+ N +ES +E R +VL RL ++
Sbjct: 1 MAENGATQYGVSPPISTDPPKPQDLALSESLMEELKAQNNFESPDETKKRGDVLARLQKL 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+ V+ + + K L +++L+E+ KIFT+GSYRLGV+GPG+DIDTL V PRH TRE DFF
Sbjct: 61 LHQLVQIVGKQKKLPNEILKESGGKIFTYGSYRLGVYGPGSDIDTLMVAPRHVTRE-DFF 119
Query: 121 GELHQML---TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L T E+TEL PVP VP++K + GVSIDL+++ L +P++L+++ +
Sbjct: 120 EHMPTLLRQATTPDELTELTPVPGITVPIIKLELCGVSIDLIFSALDRASVPKNLELTDN 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
++L+ E +R +NG RVTD+IL+LVP+ + FR LR ++ WA+RR +Y NV GF GG+
Sbjct: 180 NLLRGLTEVDLRCVNGTRVTDRILQLVPQTRVFRVALRAVKLWAQRRAIYGNVVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
+A++VARICQLYP A M+V +FF V + W+WP + L E+G L + WDP N
Sbjct: 240 AYAMMVARICQLYPRAAAPMIVQKFFFVISNWQWPRAITLQTREKGPLAEKEWDPTLNRW 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
DK HLMP+ITPAYPCMNS+ ++ ST +++ E +RGH+I E + + W LF
Sbjct: 300 DKMHLMPVITPAYPCMNSTMSIMPSTKAVLLTELKRGHDIMEEIYGGKK--QWKDLFVKQ 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 399
FF EAY++Y+ + + + + + W G V+SRLR+L IE+
Sbjct: 358 KFFSEAYQHYICVITAGKTKEAQQAWSGLVQSRLRRLIQGIEQ 400
>gi|296820828|ref|XP_002849998.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
gi|238837552|gb|EEQ27214.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
Length = 593
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/435 (40%), Positives = 265/435 (60%), Gaps = 25/435 (5%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ GIT P+S A PT +L L L+ N +E+ E R++ L L ++
Sbjct: 1 MAAPQSRQWGITPPLSSALPTPSELAENDALIAELKLQNNFEAPSETEKRKQTLHLLQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGP-----------------GADI 103
++K +S+ KGL+ + + KIFT+GSYRLGV+GP G+DI
Sbjct: 61 TIEFIKVVSKEKGLSQAAIDVSGGKIFTYGSYRLGVYGPAVMNGDISLMYSLRQFAGSDI 120
Query: 104 DTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLY 160
DTL V P+H RE DFF +L + + ++ PVPDA VP++K + SG+SIDL++
Sbjct: 121 DTLVVAPKHVMRE-DFFAHFPTVLEKFAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIF 179
Query: 161 ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 220
ARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ W
Sbjct: 180 ARLIVPSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLW 239
Query: 221 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI 280
A+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL I
Sbjct: 240 AQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHI 299
Query: 281 EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA 340
E+G L ++VW+P+ D++HLMPIITPAYP M +++N+S ST +++ E +RG ++ +
Sbjct: 300 EDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISMSTKAVILRELRRGGDMVDN 359
Query: 341 MEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 399
+ + W LF +FF YK YL I+ ++ + W G VES+LR L ++R
Sbjct: 360 IFVGQR--RWSDLFARHSFFSGDYKYYLSINSTSTTKEAQAIWSGLVESKLRHLVGALDR 417
Query: 400 HTYNMLQCHPHPGDF 414
+ ++ HP P F
Sbjct: 418 KS-SIEIAHPFPKGF 431
>gi|170040884|ref|XP_001848213.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167864495|gb|EDS27878.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 395
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/407 (43%), Positives = 262/407 (64%), Gaps = 13/407 (3%)
Query: 11 ITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISR 70
+T ISLA P +D +T +L+K L N++E + + R E+L +L+ +VK WV+ +S
Sbjct: 1 MTSAISLAEPKTEDHTKTVELQKSLEPYNVFEDESKLNHRMEILSKLNTLVKQWVRNVSI 60
Query: 71 AKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 130
+K + + L ++ KI+TFGSYRL V+ G +ID LCV PR+ R+ D+FG ++L +
Sbjct: 61 SKNMPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCVAPRNIERQ-DYFGSFFELLKKQ 119
Query: 131 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 190
PE V +A VPV+K KF G+ IDLL+ARL+L IP++ D+ +D +L+N D + VRS
Sbjct: 120 PEY---RAVEEALVPVVKMKFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLVRS 176
Query: 191 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 250
LNGCR TD+ILR VP I NFR LR ++ WAK+ G+YSN G+ GG++W +LVAR CQL
Sbjct: 177 LNGCRATDEILRPVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVARTCQL- 235
Query: 251 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 310
PN V + V +FF V+ +W+WP PV L + +LG QVWD R N +D++HLM IITPAY
Sbjct: 236 PNVVAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAY 295
Query: 311 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 370
P NS+++VS+ST ++M++EF +I + + +A WD LFE +FF Y+ ++ +
Sbjct: 296 PQQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKA--GWDKLFEAPSFFFKYRYFIVLL 353
Query: 371 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
+++ N DD ES++R L +ER + L H +P F +
Sbjct: 354 VTSNNTDDHLE-----ESKIRYLIQNLERILHINL-AHVNPKCFEQQ 394
>gi|238013826|gb|ACR37948.1| unknown [Zea mays]
Length = 428
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/287 (56%), Positives = 214/287 (74%), Gaps = 5/287 (1%)
Query: 257 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 316
MLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H MPIITPAYPCMNSS
Sbjct: 1 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 60
Query: 317 YNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA 376
YNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFEAYKNYL++DI AE+
Sbjct: 61 YNVSTSTLRVMLEQFQFGNRICQEIEMNK--TSWPALFEPFQFFEAYKNYLQVDIIAEDD 118
Query: 377 DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGV 435
+DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+GV
Sbjct: 119 EDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGV 178
Query: 436 PVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 495
+ EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G + RPS+
Sbjct: 179 KIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRH 238
Query: 496 TWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 542
+ ++ + T + D + +++ D +R AK +T P
Sbjct: 239 V--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSP 283
>gi|156037648|ref|XP_001586551.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980]
gi|154697946|gb|EDN97684.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/419 (42%), Positives = 263/419 (62%), Gaps = 9/419 (2%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M ++ ++LGIT P+S A PTD + T L + L N +ES+ + R VL L I
Sbjct: 1 MATAAPKQLGITPPLSTALPTDAEKQATDALIEELTRENNFESRADTDKRTAVLASLQNI 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+ +VK++ R + L + + A +IFT+GS+RLGV+GPG+DIDTL V P++ +REE +F
Sbjct: 61 TEEFVKRVCRKQNLPENYINNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREE-YF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQ 176
+L EM + +L PV +A+VP++KF++SG+SIDL++AR+ +L +P L +
Sbjct: 120 EMFPDLLVEMAPKGAIEDLTPVQEAYVPIIKFEYSGISIDLIFARIDTLTQVPRTLTLKD 179
Query: 177 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
D++L D+ +RS+NG RVTD I+ LVP+ FR LR ++ WA+RR +Y+N+ GF GG
Sbjct: 180 DNLLTGLDDAGLRSVNGTRVTDDIMDLVPEKAVFRNALRGVKLWAQRRAIYANIMGFPGG 239
Query: 237 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 296
+ WA+LVAR+CQLYP A S ++ +FFR+ +W+WP PVLL I+ G L ++VW+PR
Sbjct: 240 VAWAMLVARVCQLYPQATASTIILKFFRIMEKWQWPQPVLLQQIKNGKLNVRVWNPRVYK 299
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 356
D +HLMPIITP+YP M +++NV+ ST I+ E RG I + + +A W LF+
Sbjct: 300 SDSFHLMPIITPSYPSMCATHNVTKSTKEIICRELARGGNIVDRIMMGKA--PWKDLFQK 357
Query: 357 FTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF + YK YL + ++ + W G VES++R L +E H L HP F
Sbjct: 358 HTFFTKNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVTNLETHESIAL-AHPFNKGF 415
>gi|346972005|gb|EGY15457.1| Poly(A) polymerase pla1 [Verticillium dahliae VdLs.17]
Length = 604
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/405 (41%), Positives = 269/405 (66%), Gaps = 9/405 (2%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
+ G LG+T PIS A PT+ + + + + L+ +ES E R +VL +L I
Sbjct: 2 AGQGHPLGVTPPISTALPTEAEHATNKTMLEELKQQKTFESPAETQKRHQVLEQLQTICD 61
Query: 63 IWVKKISRAKGL-NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF-- 119
+VK+++R + ++ L+++A +IFT+GS+RLGV+GPG+DIDTL V P++ TR++ F
Sbjct: 62 EFVKQVARKREEGSEALIKDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTRDDYFEI 121
Query: 120 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQ 176
F L Q +T +T+L V DA VP++KF+F G+SIDL+++R+ SL +P+D ++
Sbjct: 122 FPGLLQKMTPADAITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDPQWSLAD 181
Query: 177 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
++L+ DE+ +RSLNG RVTD+I+ LVP+ FR LR ++ WA+RR +Y+N+ GF GG
Sbjct: 182 SNLLRGLDERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGG 241
Query: 237 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 296
+ WA+LVAR+CQLYP A S++V++FF + +W WP PVLL A+EEG L ++VW+P+
Sbjct: 242 VAWAMLVARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYR 301
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 356
D++HLMPIITPAYP M +++N++ S + ++ E QRG EI + + ++ W LF
Sbjct: 302 GDQFHLMPIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKR--PWGDLFIK 359
Query: 357 FTFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
TFF + YK Y+ + ++ + + W G+VES++R L +E+H
Sbjct: 360 HTFFTSGYKYYISVVTTSTTKEAHKIWSGYVESKVRVLVQGLEQH 404
>gi|196011858|ref|XP_002115792.1| hypothetical protein TRIADDRAFT_30173 [Trichoplax adhaerens]
gi|190581568|gb|EDV21644.1| hypothetical protein TRIADDRAFT_30173, partial [Trichoplax
adhaerens]
Length = 405
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 185/408 (45%), Positives = 255/408 (62%), Gaps = 10/408 (2%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEAN 83
D+ T L + + ++ ES +E R VL +++Q+VK W+ +S +K + +
Sbjct: 1 DIKLTDALIQAIIPFDVIESNDEMQHRMNVLAKVNQLVKQWIVDVSLSKNMPLSIANSVG 60
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 143
+FTFGSYRLGVH GADID LCV PRH R FF +L EVT++ V DA
Sbjct: 61 GNVFTFGSYRLGVHTKGADIDALCVAPRHVDRTS-FFASFVDLLKSQTEVTQITVVEDAF 119
Query: 144 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
VPV+K F G+ +D+L+ARL L IPE+LD+ +L+N D + VRSLNGCRVTD IL L
Sbjct: 120 VPVIKMVFDGIEMDMLFARLGLQNIPENLDLLDLELLRNLDMKCVRSLNGCRVTDAILSL 179
Query: 204 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 263
VP +FRT LR ++ WAKRRG+YSN G+LGG++WA+LVAR CQLYPNAV + +V +FF
Sbjct: 180 VPNADSFRTALRFIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQLYPNAVAATIVQKFF 239
Query: 264 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 323
V+ QW W PVLL + E L L W P N D+ LM IITP YP NS++NVS ST
Sbjct: 240 LVFNQWNWQQPVLLTRMVESDLNLNGWTP-SNFSDRSQLMQIITPVYPHQNSTFNVSKST 298
Query: 324 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 383
I+++E +RG +IC + A W FEP FF YK+Y+ + A + D+ + W
Sbjct: 299 KTILLEEIERGLKICNEIFLRNA--KWTDAFEPADFFGRYKHYIVLTAKATSEDNYKEWI 356
Query: 384 GWVESRLRQLTLKIERHTY-NMLQCHP--HPGD---FSDKSKPLYCSY 425
G VES+LR+L L +ER+ Y +++ +P +PGD ++ K L+C +
Sbjct: 357 GLVESKLRKLVLTLERNEYFDIVHINPKSYPGDPQRYAFWFKLLHCIF 404
>gi|358401751|gb|EHK51049.1| hypothetical protein TRIATDRAFT_288652 [Trichoderma atroviride IMI
206040]
Length = 572
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 204/579 (35%), Positives = 321/579 (55%), Gaps = 74/579 (12%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKI 63
++ Q G+T PIS+ PT+ + + L+ LR +ES E R +VL L I
Sbjct: 2 ASEQVYGVTPPISVNLPTEAEKRASDALKDELRRQKTFESPSETDKRWKVLDSLQLICNE 61
Query: 64 WVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
+V+K++ K N+ L++ A K+FT+GS+RLGV GPG+DIDTL V P++ TRE D+F
Sbjct: 62 FVRKVATEKEPKNEILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRE-DYFKY 120
Query: 123 LHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDS 178
+L M +T+L V DA VP++KF++S +SIDL+++R+ + P+ D+ S
Sbjct: 121 FPDLLVAMAPAGAITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFADLKDSS 180
Query: 179 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 238
+L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILALVPEEATFKLALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 239 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 298
WA+LVAR+CQLYP A S++V++FF V QWRWP PVLL I G L ++VW+P+ D
Sbjct: 241 WAMLVARVCQLYPKAETSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGD 300
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
+HLMP+ITPAYP M +++N++ S++ I+ E +RG EI E + + W LF T
Sbjct: 301 SFHLMPVITPAYPSMCATFNITRSSMTIIQRELRRGLEISEEIMVGKR--PWSDLFVKHT 358
Query: 359 FF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH------- 410
FF + Y+ Y+ + +++N + + W G+VES++R L K+E+H+ ++ HP
Sbjct: 359 FFTQGYRYYISVVSASKNKEAHKVWSGYVESKVRMLVQKLEQHS-SIALAHPFNKGYDRR 417
Query: 411 -------------------------PGDFSDKSKP----------------LY-CSYFMG 428
G S++ P +Y ++++G
Sbjct: 418 HLCKNDHEIEQVQEGSLEFVIKDEGKGQTSEEKNPKLEENQDSSAPTSPVEVYTTTHYIG 477
Query: 429 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNLPNFVFP 484
++ ++G + D+ V EFK + + +P + + V HV NLP+ VF
Sbjct: 478 IELEEG-----AKSLDLSYQVDEFKVLCTSWKKYEDELRPLVSLGVQHVRNFNLPDDVFE 532
Query: 485 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQ 523
G ++P K + S + +R + P A KR+Q
Sbjct: 533 AG--ETKPQKKSAKSLASKKRGPTEDNTPPA----KRQQ 565
>gi|358383352|gb|EHK21019.1| hypothetical protein TRIVIDRAFT_78180 [Trichoderma virens Gv29-8]
Length = 575
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/560 (35%), Positives = 311/560 (55%), Gaps = 70/560 (12%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSRE----EVLGRLDQ 59
++ Q G+T PIS+ PT+ + + L + LR +ES + R +VL L +
Sbjct: 2 ASEQVYGVTPPISVTLPTEAEKRASDALIEELRRQKTFESPSDTDKRHSFRYKVLASLQE 61
Query: 60 IVKIWVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREED 118
I +V+K++R K N+ L++ A K+FT+GS+RLGV GPG+DIDTL V P++ TRE D
Sbjct: 62 ICNEFVRKVAREKEPKNEILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRE-D 120
Query: 119 FFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS 175
+F +L M +T+L V DA VP++KF++S +SIDL+++R+ I D D
Sbjct: 121 YFKHFPDLLVSMAPPGSITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFDNL 180
Query: 176 QDS-ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 234
+DS +L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF
Sbjct: 181 KDSSLLRGLDEAELRSLNGTRVTDEILALVPEESTFKLALRAIKLWAQRRAVYANIMGFP 240
Query: 235 GGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRR 294
GG+ WA+LVAR+CQLYP A S++V++FF V QWRWP PVLL I G L ++VW+P+
Sbjct: 241 GGVAWAMLVARVCQLYPKAATSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKV 300
Query: 295 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 354
D +HLMP+ITPAYP M +++N++ S++ ++ E +RG EI E + + W LF
Sbjct: 301 YKGDSFHLMPVITPAYPSMCATFNITRSSMSVIQRELRRGLEISEQIMVGKR--PWSDLF 358
Query: 355 EPFTFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-------- 405
TFF + Y+ Y+ + ++++ + + W G+VES++R L K+E+H L
Sbjct: 359 VKHTFFTSGYRYYISVVSASKDKEAHKVWSGYVESKVRMLVQKLEQHPSIALAHAFNKGY 418
Query: 406 ---------------------------------QCHPHP------GDFSDKSKPLYCSYF 426
+ P P + S + +++
Sbjct: 419 DRRHRCKNDHEIEQVQEGSLEFMIKEESGSQSGEIEPKPEVKDGSAETSSPVEVFTTTHY 478
Query: 427 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNLPNFV 482
+GL+ ++G + D+ V EFK + + +P + + V HV NLP+ V
Sbjct: 479 IGLELEEG-----AKSLDLSYQVDEFKVLCTQWKKYQEELQPSVSLGVQHVRNFNLPDDV 533
Query: 483 F-PGGVRPSRPSKGTWDSRR 501
F PG +P + S + +++
Sbjct: 534 FDPGEEKPQKKSAKSMANKK 553
>gi|302409142|ref|XP_003002405.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
gi|261358438|gb|EEY20866.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
Length = 575
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/529 (36%), Positives = 311/529 (58%), Gaps = 41/529 (7%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
G LG+T PIS A PTD + + + + L+ +ES E R +VL +L I +
Sbjct: 4 QGHPLGVTPPISTALPTDAEHATNKTMLEELKQQKTFESPAETQKRHQVLEQLQTICDEF 63
Query: 65 VKKISRAKGL-NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF--FG 121
VK+++R + ++ L+++A +IFT+GS+RLGV+GPG+DIDTL V P++ TR++ F F
Sbjct: 64 VKQVARKREEGSEALIKDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTRDDYFEIFP 123
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDS 178
L Q +T +T+L V DA VP++KF+F G+SIDL+++R+ SL +P+D ++ +
Sbjct: 124 GLLQKMTPADAITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDPQWSLADSN 183
Query: 179 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 238
+L+ DE+ +RSLNG RVTD+I+ LVP+ FR LR ++ WA+RR +Y+N+ GF GG+
Sbjct: 184 LLRGLDERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGVA 243
Query: 239 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 298
WA+LVAR+CQLYP A S++V++FF + +W WP PVLL A+EEG L ++VW+P+ D
Sbjct: 244 WAMLVARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGD 303
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
++HLMPIITPAYP M +++N++ S + ++ E QRG EI + + ++ W LF T
Sbjct: 304 QFHLMPIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKR--PWGDLFIKHT 361
Query: 359 FFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLK---------------IERHTY 402
FF + YK Y+ + ++ + + W G+VES++++ +L+ + T
Sbjct: 362 FFTSGYKYYISVVTTSTTKEAHKIWSGYVESKVQEGSLQYLAGQETTETPNPEIVVAKTE 421
Query: 403 NMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQ--------------GVPVGEGEQ-FDIRL 447
L P D + ++ G++ + G+ +GEG + D+
Sbjct: 422 GGLALDGLPLDGTTETGTEANGTGEGVEEEVQTWPTNVFTTTHYIGLELGEGAKSLDLSY 481
Query: 448 TVKEFKQAVSMYTLRKPGM-QISVAHVTRRNLPNFVF-PGGVRPSRPSK 494
V FKQ + + ++V HV NLP+ +F PG +P + K
Sbjct: 482 QVDSFKQLCGQWEKYSAKLNHLTVQHVRNFNLPDDLFEPGEKKPQKQQK 530
>gi|298708409|emb|CBJ48472.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 496
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 203/484 (41%), Positives = 289/484 (59%), Gaps = 36/484 (7%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGL 74
IS P DL +++LEK+L+ + LYE+ E + R+ VL L ++VK W KI+ +GL
Sbjct: 15 ISDREPESKDLAASQELEKFLKAMGLYENAEGSKRRKAVLLMLLKLVKEWSGKIAAEEGL 74
Query: 75 NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVT 134
+ + + A K TFGSY LGVH P ADID LC+ PRH +RE FF Q+L E+
Sbjct: 75 DKEEVSPATLK--TFGSYHLGVHTPDADIDVLCLAPRHCSRE-SFFTSFCQILRNHTEID 131
Query: 135 ELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGC 194
EL PVP+A+ PV+KFK GVSID+L+ L +P ++ L++ D+ VRSLNG
Sbjct: 132 ELFPVPEAYTPVIKFKAQGVSIDMLFCSLHYPKLPRLCNVHVQEHLRHLDDAGVRSLNGV 191
Query: 195 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 254
RV + IL LVP Q FRTTLR ++ WA+RRG+YSNV G LGG+NWA+LVA + Q YPNA
Sbjct: 192 RVAELILSLVPNHQAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNAS 251
Query: 255 PSMLVSRFFRVYTQWRWPNPVLLCAIE--------EGS-LGLQ-VWDPRRNPKDKYHLMP 304
PS+L+++FF +Y +W+WPN V L ++ EG L VW+P NP+DK HLMP
Sbjct: 252 PSVLLTKFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAVWNPVANPRDKAHLMP 311
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITPAYP MNSSYNV +R++ +E RG I + + A +W LFE FF ++
Sbjct: 312 IITPAYPAMNSSYNVGEPQMRLIREEIARGWRITKGISLGIA--NWANLFERSDFFWRFE 369
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIER----HTYNMLQCHPHPGDFSDKSKP 420
Y+++DISA +A D R W GW+ESR+R + +++ Y + P+P + ++
Sbjct: 370 LYVQVDISARSAADHRLWFGWIESRMRSFLVCLDQIDMVEAYPFVNPLPNPYLTNAETGA 429
Query: 421 LYCSYFMGL--------QRKQGVPVGEGEQFDIRLTVKEFKQAVSMY---TLRKPGMQIS 469
+ S+F+GL + GVPV D+ ++F V ++ R+ GM++
Sbjct: 430 VGNSFFIGLGFPEVANGRSPSGVPV------DLTPAWRDFMMRVELWGDRRRRREGMEVD 483
Query: 470 VAHV 473
V V
Sbjct: 484 VKAV 487
>gi|378730028|gb|EHY56487.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 611
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 173/407 (42%), Positives = 261/407 (64%), Gaps = 13/407 (3%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G S ++ G++ PIS A P D +T +L + L+ N YE +E R L L+++
Sbjct: 5 GQSAPKQWGVSPPISTALPEPLDNEKTAELIEELKRENNYEPMDETKKRMSTLALLNRVT 64
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
+ +V+++SR + L + + KI+ +GSYRLGV GPG+DIDTL V PRH TRE DFF
Sbjct: 65 QEFVREVSRRQRLPPSQIDQFGGKIYPYGSYRLGVFGPGSDIDTLAVAPRHVTRE-DFFE 123
Query: 122 ELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQD 177
+L M VT L VPD+ VP++K +G+ IDL++A + SL IP+DL ++ +
Sbjct: 124 YFPAVLERMAGPGAVTSLTAVPDSFVPIIKLVLNGIEIDLIFASIASLQTIPKDLTLNDN 183
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
++L D+ TVR++ G RVTD+IL LVP+ + FRT LR ++ WA+RR +Y+N+ G+ GG+
Sbjct: 184 NLLMGLDQPTVRAVTGPRVTDEILSLVPEHKTFRTALRAIKLWAQRRAIYANIVGYPGGV 243
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDP 292
WA+LVAR+CQLYP+AV + +V +FF V + W WP PV+L IE+ + G +VW+P
Sbjct: 244 AWAMLVARVCQLYPHAVGATIVDKFFFVISHWDWPTPVMLKDIEQLKNADLNKGFRVWNP 303
Query: 293 RRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDT 352
P D+ ++MPIITPA+P M ++YN+S S +++++E +RG EI + +A W
Sbjct: 304 AIYPGDRKNIMPIITPAFPSMCATYNISKSGKKVILNELKRGGEITNKIFAGKA--KWSD 361
Query: 353 LFEPFTFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 398
LF+ TFF A +K YL I S+ NAD + W G VES++R +++E
Sbjct: 362 LFKKHTFFTADHKYYLSITASSLNADSAKAWAGLVESKVRIFVMQLE 408
>gi|170051830|ref|XP_001861944.1| poly a polymerase [Culex quinquefasciatus]
gi|167872900|gb|EDS36283.1| poly a polymerase [Culex quinquefasciatus]
Length = 631
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/409 (44%), Positives = 257/409 (62%), Gaps = 21/409 (5%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T ISLA +D +T +L+K L E R E+L +L+ +VK
Sbjct: 243 LGMTSAISLAETKPEDHTKTVELQKAL----------ELNHRMEILPKLNTLVKH----- 287
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
++ L + + + KI+TFGSYRLGV+ GA+ID LCV PR+ R D+FG ++L
Sbjct: 288 AQCFHLKEHV-AKLGGKIYTFGSYRLGVNHKGANIDALCVAPRNIERL-DYFGSFFELLK 345
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+ PEVTE V +A VPV+K F G+ IDLL+ARL+L IP + D+ D +L+N D + V
Sbjct: 346 KQPEVTECRAVEEALVPVVKMNFDGIKIDLLFARLALKEIPNNFDLGDDMLLKNLDPKLV 405
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCR TD+ILRLVP I NFR LR ++ WAK+ G+YSN G+ GG++W +LVAR CQ
Sbjct: 406 RSLNGCRATDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVARTCQ 465
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
L PN V + V +FF V+ +W+WP PV L + +LG QVWD R N +D++HLMPIITP
Sbjct: 466 L-PNVVAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMPIITP 524
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP NS+++VS+ST ++M++EF G +I + + +A WD LFE +FF Y+ +
Sbjct: 525 AYPQPNSTFHVSSSTRKVMLNEFNSGMQITDEIMLGKA--GWDKLFEAPSFFFKYRYVIV 582
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
+ +++ N DD W VES++R L +ER + L H +P F +
Sbjct: 583 LLVTSNNTDDHLEWCEMVESKIRYLIQNLERILHINL-AHVNPKCFEQQ 630
>gi|119186325|ref|XP_001243769.1| hypothetical protein CIMG_03210 [Coccidioides immitis RS]
Length = 587
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/418 (41%), Positives = 253/418 (60%), Gaps = 20/418 (4%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ G T PIS A PT +L L L+ N +E+ E R ++L + ++
Sbjct: 1 MATPQVKQWGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK + R KGL+ + + KIF +GSYRLGV+GPG+DIDTL VGP+H E DFF
Sbjct: 61 TVEFVKTVGRRKGLSQAAIDVSGGKIFAYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ L M + +L PVPDA+VP++K + SG+SIDL++ARL + IP DLD+
Sbjct: 120 LDFPPTLERMAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+ G+
Sbjct: 180 ELLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQ------------SGV 227
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR+CQLYP A S++V +FFR+ W WP PVLL IE+G L ++VW+P+
Sbjct: 228 AWAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHG 287
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D++HLMPIITPAYP M +++NVS ST +++ E +RG +I E + + + W LF
Sbjct: 288 DRFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKH 345
Query: 358 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF YK YL I S+ + + W G VE++LR L + +++ ++ HP P F
Sbjct: 346 TFFSKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKA-SIDVAHPFPKGF 402
>gi|402077328|gb|EJT72677.1| Poly(A) polymerase pla1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 633
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/402 (42%), Positives = 261/402 (64%), Gaps = 11/402 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++LG+T P+S++ P++ +L T L LR N +ES E R VL L I +VK
Sbjct: 5 RQLGVTPPVSVSLPSEFELQATDALLAELRAQNSFESPLETEKRHRVLASLQTIADAFVK 64
Query: 67 KISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
+++ + N L+++A AK+F +GS RLGV GPG+DIDTL VGPR+ TRE D+F
Sbjct: 65 VVAKEREPHNAVLIKDARAKVFAYGSLRLGVWGPGSDIDTLVVGPRYVTRE-DYFQHFPD 123
Query: 126 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSI 179
+L +M +T+L V +A VP++KF++ G+SIDL+++R+ +L +P D + D++
Sbjct: 124 LLVKMAPPGAITDLTVVEEAFVPIIKFEYHGISIDLIFSRIATLKQLPSDPAWGLKDDNL 183
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+ DE+ +RS+NG RVTD+IL LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ W
Sbjct: 184 LRGLDEKELRSVNGTRVTDEILSLVPEQNIFRTALRAIKLWAQRRAIYGNIMGFPGGVAW 243
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
A+LVAR+CQLYP A S++V++FF + QW WP PVLL I +G L ++VW+PR D
Sbjct: 244 AMLVARVCQLYPKATSSVIVNKFFSILLQWPWPQPVLLKPIGDGPLQVRVWNPRVYKGDS 303
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
YHLMP+ITPAYP M +++NV+ S++ ++ E Q EI + + W +F TF
Sbjct: 304 YHLMPVITPAYPSMCATFNVTRSSMTVIKRELQLAAEITNNIMCSTK--PWKDMFAKHTF 361
Query: 360 F-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
F + +K Y+++ ++ + + + W G+VES++R L +ERH
Sbjct: 362 FTKDFKYYMQVISASRDKEAHKIWSGFVESKVRMLVQSLERH 403
>gi|429852211|gb|ELA27357.1| poly polymerase [Colletotrichum gloeosporioides Nara gc5]
Length = 632
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 167/410 (40%), Positives = 266/410 (64%), Gaps = 17/410 (4%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEE----AVSREEVLGRLD 58
+S + G+T PIS A PT+ + L + L+ N +E+++ SR +V+ L
Sbjct: 2 ASEERAYGVTPPISTALPTELENQAKEALIEELKKQNTFETRQSNPFLGESRYQVINHLQ 61
Query: 59 QIVKIWVKKISRAKGL-NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREE 117
QI +VK+++R + N+ L+++A +IFT+GS+RLGV+GPG+DIDTL V P++ TR
Sbjct: 62 QICDEFVKRVARKREEGNEALIRDARGQIFTYGSFRLGVYGPGSDIDTLVVAPKYVTRS- 120
Query: 118 DFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLD 173
D+F +L EM +T++ V DA VP++KF+F G+SIDL+++R++ L +P++ +
Sbjct: 121 DYFEIFPGLLKEMAPSDAITDMAVVEDAFVPIIKFEFFGISIDLIFSRIAMLKQLPKEFN 180
Query: 174 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGF 233
+ +L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR +Y+N+ GF
Sbjct: 181 VQDSGLLRGLDEAELRSLNGTRVTDEILSLVPEEATFKLALRAIKLWAQRRAIYANIMGF 240
Query: 234 LGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 293
GG+ WA+LVAR+CQLYP A S++V++FF + +W WP PVLL +E G L ++VW+P+
Sbjct: 241 PGGVAWAMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKNVEGGPLQVRVWNPK 300
Query: 294 RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE--AMEKNEADVDWD 351
D++HLMP+ITPAYP M ++YN++ S + ++ E RG EI + + KN W
Sbjct: 301 VYKGDQFHLMPVITPAYPSMCATYNITRSAMTVIQQELTRGCEITDNIMVGKN----PWS 356
Query: 352 TLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
LF TFF + YK Y+ + ++ + + + W G+VES++R L +E+H
Sbjct: 357 DLFVKHTFFTQGYKYYISVITASTDKEAHKIWSGYVESKVRVLVQGLEQH 406
>gi|348529712|ref|XP_003452357.1| PREDICTED: poly(A) polymerase gamma-like [Oreochromis niloticus]
Length = 763
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 199/496 (40%), Positives = 275/496 (55%), Gaps = 70/496 (14%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G + GIT ISLA P + D T+KL ++ ++E +EE R VLG+L+ V
Sbjct: 11 GQQPQKHYGITSAISLAPPREIDHHYTKKLCDAMKPFGVFEDEEELNHRLAVLGKLNNFV 70
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K W+ +IS K L + KIFTFGSYRLGVH GADID LCV PRH R DFF
Sbjct: 71 KEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFQ 129
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
+ L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DSIL+
Sbjct: 130 SFFEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILR 189
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
N D + +RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+
Sbjct: 190 NLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAM 249
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
LVAR CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR +
Sbjct: 250 LVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVS------ 303
Query: 302 LMPIITPA-YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
ITP Y M Y V T++ + E+N ++W L
Sbjct: 304 ----ITPVFYLLMVLHYIVLTAS---------------ASTEENH--LEWIGL------- 335
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDK 417
VES++R L +ER+ Y + +P PG ++
Sbjct: 336 -------------------------VESKIRVLVGNLERNEYITLAHVNPQSFPGSKENR 370
Query: 418 SKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAH 472
++ + S +F+G+ K+ V E D+ ++ F V + + K GM+I H
Sbjct: 371 NENDFVSMWFIGIIFKK-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATH 429
Query: 473 VTRRNLPNFVFPGGVR 488
V ++ L ++ P V+
Sbjct: 430 VKKKQLHQYLPPEVVQ 445
>gi|171686334|ref|XP_001908108.1| hypothetical protein [Podospora anserina S mat+]
gi|170943128|emb|CAP68781.1| unnamed protein product [Podospora anserina S mat+]
Length = 661
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 171/405 (42%), Positives = 261/405 (64%), Gaps = 13/405 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS A PT+ + + L + LR +ES+ E +R++V+ +L++I +VKK +
Sbjct: 7 GVTPPISTALPTEAEKRMHQALHEELRAQGTFESRAETEARKKVIAQLEKITTAFVKKAT 66
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
A+ N +++EA ++FT+GSYRLGV+GPG+DIDTL V P+H T E+ +F +L E
Sbjct: 67 -AETQNSFMVREAIGRVFTYGSYRLGVYGPGSDIDTLVVAPKHVTTEQ-YFRLFPPLLVE 124
Query: 130 MP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPED--LDISQDSILQNA 183
M +T+L PVPDA VP++KF+FSG+SIDL++ + L IPED +++ +++L+
Sbjct: 125 MAPPGAITDLTPVPDAFVPIIKFEFSGISIDLIFCSIKGLTQIPEDKSWNLTDNTLLRGL 184
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
E VRSLNG RVTD+IL LVP+ F+ LR ++ WA+R+ +Y+N+ GF GG+ WA+LV
Sbjct: 185 SENEVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAMLV 244
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE--GSLGLQVWDPRRNPKDKYH 301
AR+CQLYP A +++V++FF + +W WP PVLL IE VW+P+ D+ H
Sbjct: 245 ARVCQLYPKATSAVVVNKFFHIMLKWPWPLPVLLKDIEYNISVTRAPVWNPKLYSSDRNH 304
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPIITPAYP M +++N++ S+ ++M E ++G ++ E + A W LF TFF
Sbjct: 305 RMPIITPAYPAMCATHNINRSSKVVIMQELEKGVQVTEEIMTGRA--PWKALFTKHTFFT 362
Query: 362 A-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 405
+ ++ YL + S+ D W G++ESR+R L KIE H +L
Sbjct: 363 SDFRYYLTVISSSRTKDAQNVWSGFIESRVRVLVNKIENHAAIVL 407
>gi|389639278|ref|XP_003717272.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
gi|351643091|gb|EHA50953.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
Length = 616
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 169/402 (42%), Positives = 265/402 (65%), Gaps = 11/402 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++LG+T P+S+ PT+++ T L LR N +E E R VL L +I +VK
Sbjct: 5 RQLGVTPPVSVHLPTEEEKQATDSLLAELRAQNSFEGPVETEKRFAVLRSLQEIADAFVK 64
Query: 67 KISRAKGL-NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
++R K N L+++A K+F +GS RLGV GPG+DIDTL V PR+ TRE D+F
Sbjct: 65 TVARKKEPDNAVLIKDARGKVFAYGSLRLGVWGPGSDIDTLVVAPRYVTRE-DYFEHFPG 123
Query: 126 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSI 179
+L EM +T+L V DA VP++KF+FSG+SIDL+++R+ ++ +P D ++S ++
Sbjct: 124 LLVEMAPPNAITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNL 183
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+ DE+ +RS+NG RVTD+I+ LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ W
Sbjct: 184 LRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAW 243
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
A+LVAR+CQLYP A S++V++FF + +W WP PVLL AIE+G L ++W+P+ P D+
Sbjct: 244 AMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDR 303
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
YHLMPIITPAYP M +++N++ S+ ++ E + ++ + + + W LF+ TF
Sbjct: 304 YHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGK--LPWKDLFQKHTF 361
Query: 360 F-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
F + +K Y+++ ++++ + + W G+VES++R L +ERH
Sbjct: 362 FTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLERH 403
>gi|440468857|gb|ELQ37991.1| Poly(A) polymerase pla1 [Magnaporthe oryzae Y34]
Length = 611
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/402 (42%), Positives = 265/402 (65%), Gaps = 11/402 (2%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++LG+T P+S+ PT+++ T L LR N +E E R VL L +I +VK
Sbjct: 5 RQLGVTPPVSVHLPTEEEKQATDSLLAELRAQNSFEGPVETEKRFAVLRSLQEIADAFVK 64
Query: 67 KISRAKGL-NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
++R K N L+++A K+F +GS RLGV GPG+DIDTL V PR+ TRE D+F
Sbjct: 65 TVARKKEPDNAVLIKDARGKVFAYGSLRLGVWGPGSDIDTLVVAPRYVTRE-DYFEHFPG 123
Query: 126 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSI 179
+L EM +T+L V DA VP++KF+FSG+SIDL+++R+ ++ +P D ++S ++
Sbjct: 124 LLVEMAPPNAITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNL 183
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+ DE+ +RS+NG RVTD+I+ LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ W
Sbjct: 184 LRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAW 243
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
A+LVAR+CQLYP A S++V++FF + +W WP PVLL AIE+G L ++W+P+ P D+
Sbjct: 244 AMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDR 303
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
YHLMPIITPAYP M +++N++ S+ ++ E + ++ + + + W LF+ TF
Sbjct: 304 YHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGK--LPWKDLFQKHTF 361
Query: 360 F-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
F + +K Y+++ ++++ + + W G+VES++R L +ERH
Sbjct: 362 FTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLERH 403
>gi|452986896|gb|EME86652.1| hypothetical protein MYCFIDRAFT_49534 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 173/403 (42%), Positives = 256/403 (63%), Gaps = 7/403 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M SNG + G++ P+S A P+ D L L+ N +ES EE R VL +L ++
Sbjct: 1 MSESNGAQFGVSSPLSTAPPSRQDTELGETLLTELKAQNNFESPEETAKRNSVLQKLQKL 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
++ V+ + + KG++ +LL+EA KIFT+GSYRLGV+GPG+DID+L V P+H +R+ DFF
Sbjct: 61 LQKLVQDVGKKKGMSPELLKEAGGKIFTYGSYRLGVYGPGSDIDSLMVAPKHVSRD-DFF 119
Query: 121 GELHQML--TEMPE-VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ M+ T PE +TE+ V A VP++K K GV IDL++A L IP +LD+
Sbjct: 120 ERMPGMIRATFKPEEITEMVVVAAAAVPIIKTKLMGVDIDLIFANLQRDSIPTNLDLGDT 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
++L+ D+ ++ +NG RVTD+IL LVP+ + FR LR ++ WA++R VY +A + GG+
Sbjct: 180 NLLRGLDDTDLKCVNGTRVTDRILTLVPQTRIFRIALRAVKLWAQKRAVYGAIACYPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
+ ++VAR+CQLYPNA +V +FF + W WP+P+ L A E+G LG WDP NP
Sbjct: 240 AYGMIVARVCQLYPNAAAPKIVQKFFWLLHTWAWPSPIYLQAREKGPLGKTEWDPTTNPG 299
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
DK HLMP+ITPAYPCMNS++ ++ ST+ ++ E RG +I E E W LF
Sbjct: 300 DKRHLMPVITPAYPCMNSTHTITPSTMAVLKKESDRGEKIMN--EIYEGKRPWKDLFAKH 357
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 399
TFF +AY++Y+ I +A D + W G V+SR+++L IE+
Sbjct: 358 TFFSDAYQHYICIITAARTKDAQQAWSGLVQSRVKRLLAGIEQ 400
>gi|452845518|gb|EME47451.1| hypothetical protein DOTSEDRAFT_69399 [Dothistroma septosporum
NZE10]
Length = 610
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 169/401 (42%), Positives = 252/401 (62%), Gaps = 8/401 (1%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
+ N G++ P+S PT+ DL + L L+ N +E E REEVL +L+ ++K
Sbjct: 2 AQNDDTRGVSAPLSTDSPTERDLKLSADLMTELKAQNNFEPPEATQKREEVLVKLEGLLK 61
Query: 63 IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 122
V+K+ ++KGL +++LQ+A KIFT+GSYRL V GPG+DID L + PRH TRE DFF
Sbjct: 62 ELVRKVGKSKGLPEEILQQAGGKIFTYGSYRLKVFGPGSDIDALMIAPRHVTRE-DFFKY 120
Query: 123 LHQML---TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 179
+ M+ T ++TEL PV A+VP++K + GV++DL+++ L + +P+DL + ++
Sbjct: 121 MPDMIRQSTPTEQLTELVPVEAANVPIIKTEIDGVAVDLIFSTLHMASVPKDLQLKDSNL 180
Query: 180 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
L+ E +R +NG RVTD++L+LVP+ + FR LR ++ WA RRGVY NV GF GG+ +
Sbjct: 181 LRGLSETDLRCVNGTRVTDRLLQLVPETKTFRLALRAIKLWASRRGVYGNVYGFPGGVGY 240
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKD 298
A++V R+CQLYP A ++V++FF V +WRWP+PV LC E LG V NP +
Sbjct: 241 AMMVVRMCQLYPRAAAPVIVNKFFMVMGKWRWPDPVTLCKREPAPDLGHYVAQWPENPWE 300
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
K MPIITP +PCMN++ ++ S L +++ EFQR +I + + +W LF T
Sbjct: 301 KADKMPIITPVFPCMNATGGLTASNLEVILREFQRALKITNDIHNGKQ--EWQALFARQT 358
Query: 359 FF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 398
FF E YK+YL + + + + W G+V SRLR+L IE
Sbjct: 359 FFTEDYKHYLCLVTGSRTKEAQQAWSGFVSSRLRKLVSSIE 399
>gi|301118192|ref|XP_002906824.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 691
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 198/573 (34%), Positives = 301/573 (52%), Gaps = 45/573 (7%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGL 74
I P DL ++ KL+ Y+ + ES R +L L I + WVK++ KG+
Sbjct: 20 IRTTPPEPKDLEQSAKLQTYMDEHFPTESDANITRRSLILAELRSIFRAWVKQVCMEKGV 79
Query: 75 NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVT 134
+++ +A +I GSYRLGV+ PGADIDT+CV PRH TRE DFF L ++ + P+V+
Sbjct: 80 PEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTRE-DFFSSLKEIFLKHPKVS 138
Query: 135 ELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGC 194
+L + A VP++ F + ++IDL A L IPE+L+I D +L D T +SLNG
Sbjct: 139 QLVAIEGAIVPLITFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGP 198
Query: 195 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 254
RVT+ +++L P ++F + LR +R WAKRRG+YSN G+LGG+NW +LV I QLYP A
Sbjct: 199 RVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAA 258
Query: 255 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMN 314
PS L+ RFF V W+WP + LC + LGL+VW+ ++Y +MPI+TPAYP MN
Sbjct: 259 PSTLLLRFFMVLNNWKWPLAIQLCKTHDAKLGLEVWNANAG-HNRYQVMPILTPAYPSMN 317
Query: 315 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE 374
SS+NVST +L +M +EF+RG I + + ++ +W LFEP FF +++YL +++ E
Sbjct: 318 SSFNVSTHSLTVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSEFFAVHQHYLAVEVYTE 376
Query: 375 NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQ---- 430
D+ + W + ESR+R+L +E YN C +K SY +
Sbjct: 377 KQDEEQAWCSFCESRMRKL---VESLAYNPALCR-----LRVYTKKFSLSYVTAGEAPVG 428
Query: 431 -RKQGVPVGEGEQF--------------------DIRLTVKEFKQA-VSMYTLRKPGMQI 468
+ G P + +F I +V+ FK + + R P M +
Sbjct: 429 GQSNGQPPAQPSKFGACFYVGFDIDRRQLRSREVSIDSSVEYFKNNDLYRWNKRTPTMDV 488
Query: 469 SVAHVTRRNLPNFVFP--GGVRPSRPSKGTW-----DSRRALERKVSSHTKPGADDGRKR 521
V V + LP VF GG +R ++ + + + E + P D+G
Sbjct: 489 RVTPVLWKALPESVFEEMGGRTVARAARREFMKKKKEEEKKAEEAAAPSPSPSGDEGTHS 548
Query: 522 KQTDDNVDTHLRNAKCHATMPSSSGEFRE-GSP 553
++ D++ + A M + G + GSP
Sbjct: 549 QEDGDDLTCSQKAASLATEMANGKGSISQPGSP 581
>gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae]
Length = 694
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 184/494 (37%), Positives = 273/494 (55%), Gaps = 35/494 (7%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGL 74
I P DL ++ KL+ ++ + ES R +L L I + WVK++ KG+
Sbjct: 20 IRTTPPEPKDLEQSAKLQSFMDEHFPTESDANITRRSLILAELRSIFRQWVKQVCMDKGV 79
Query: 75 NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVT 134
+++ +A +I GSYRLGV+ PGADIDT+CV PRH TRE DFF L ++ + P+V+
Sbjct: 80 PEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTRE-DFFSSLKEIFLQHPKVS 138
Query: 135 ELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGC 194
L + A VP++ F + ++IDL A L IPE+L+I D +L D T +SLNG
Sbjct: 139 NLVAIEGAIVPILTFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGP 198
Query: 195 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 254
RVT+ +++L P ++F + LR +R WAKRRG+YSN G+LGG+NW +LV I QLYP A
Sbjct: 199 RVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAA 258
Query: 255 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMN 314
PS L+ RFF V W+WP + LC + +LGL+VW+ ++Y +MPI+TPAYP MN
Sbjct: 259 PSTLLLRFFMVLNNWKWPLAIQLCKTHDANLGLEVWNANAG-HNRYQVMPILTPAYPSMN 317
Query: 315 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE 374
SS+NVST +L +M +EF+RG I + + ++ +W LFEP FF +++YL +++ E
Sbjct: 318 SSFNVSTHSLTVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSDFFAVHQHYLAVEVYTE 376
Query: 375 NADDLRNWKGWVESRLRQLTLKIERHTYNMLQC-----------------------HPHP 411
++ W G+ ESR+R+L +E YN C P+
Sbjct: 377 KQEEEAAWCGFCESRMRKL---VESLAYNPALCRLRAYTKKFPLSFVTGGEAPAGEQPNG 433
Query: 412 GDFSDKSKPLYCSYF-MGLQRKQGVPVGEGEQFDIRLTVKEFKQA-VSMYTLRKPGMQIS 469
+ SK C Y + R+Q + I +V+ FK + + R P M +
Sbjct: 434 AALAQPSKFGVCFYVGFDIDRRQ----LRSREVSIDNSVEYFKNNDLYRWNKRTPTMDVR 489
Query: 470 VAHVTRRNLPNFVF 483
V V + LP VF
Sbjct: 490 VTPVVWKALPESVF 503
>gi|323453660|gb|EGB09531.1| hypothetical protein AURANDRAFT_24142, partial [Aureococcus
anophagefferens]
Length = 402
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/391 (44%), Positives = 234/391 (59%), Gaps = 24/391 (6%)
Query: 42 ESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGA 101
ES E RE V+G L ++ + WV+ + +AKGL+D+L EA K++T GSYRL VH PGA
Sbjct: 8 ESDGELRRRERVMGELKRLFQAWVRSVCKAKGLSDELASEAGGKLYTSGSYRLRVHEPGA 67
Query: 102 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYA 161
DID++CV P H TRE DFF L ML E P+V L V A VP+M F GV+IDLL+A
Sbjct: 68 DIDSICVAPNHCTRE-DFFDTLKAMLLEHPQVENLRSVETAVVPIMTFDLDGVNIDLLFA 126
Query: 162 RLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP-KIQNFRTTLRCMRFW 220
L L IP LDI +D++LQ DE T +SLNG RVT+ I +LV ++F LR R W
Sbjct: 127 HLPLNAIPASLDIDEDAVLQGVDEATEKSLNGPRVTNLIYKLVSHNYESFLQVLRVARVW 186
Query: 221 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI 280
AKRRG+YSN G+ GGIN+ +LVA ICQL+P A PS L+ +FF ++ +W WP P +LC
Sbjct: 187 AKRRGIYSNKLGYFGGINFNILVALICQLFPKATPSYLLCKFFAIFAKWDWPAPAILCRP 246
Query: 281 EEGSLGLQVWD---PRRNPKDKYH-----LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 332
+ G +VW + + YH LMPI+TPAYP MNS+ NV+ + ++ DEF
Sbjct: 247 LDHGYGFEVWGQNAEQLRGRMAYHNLRNNLMPIVTPAYPAMNSAANVNPWSFAVLRDEFA 306
Query: 333 RGHEIC--------EAMEKNEADVD-----WDTLFEPFTFFEAYKNYLRIDISAEN-ADD 378
RG E+C E E D D WD L E FF+ Y YL +++ + +D
Sbjct: 307 RGAEVCKRIVARHAELAENGAVDPDVGGPLWDELVEKTDFFDKYDAYLAVNVLGDGEKED 366
Query: 379 LRNWKGWVESRLRQLTLKIERHTYNMLQCHP 409
N+KG++ SRLR+L K+ M+ P
Sbjct: 367 FDNFKGFLSSRLRKLVEKMGHLPLKMIHLFP 397
>gi|384485221|gb|EIE77401.1| hypothetical protein RO3G_02105 [Rhizopus delemar RA 99-880]
Length = 472
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/333 (51%), Positives = 232/333 (69%), Gaps = 19/333 (5%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M +N Q+ G+T P+SL PT+ +L T L K L + NL+E+ +EA R I
Sbjct: 1 MSQTNRQQWGVTAPVSLNKPTEHELKLTNDLLKTLHEYNLFETDKEAKQR---------I 51
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
VK +V K+S+ +GL++ + + A KIFTFGSY+LGVHG GADIDTLCV P+H TRE FF
Sbjct: 52 VKEFVYKVSKLQGLSESVARSAGGKIFTFGSYQLGVHGAGADIDTLCVFPQHVTREH-FF 110
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
+ ML E+PEVTEL V +A+VPV++ FSG+ ID + ARL L IPEDLD+S DS+L
Sbjct: 111 SIMFNMLNELPEVTELTSVVEAYVPVIRMHFSGIPIDFVCARLLLPSIPEDLDLSDDSLL 170
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+E+ VRS++G RVT++ILRLVP + FR +LR ++ WAK+RG+YSNV GFLGG+ WA
Sbjct: 171 VGLEEKCVRSVSGPRVTNEILRLVPSVSVFRESLRTIKLWAKKRGIYSNVMGFLGGVAWA 230
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVAR+CQ+YPNA + +VSRFF + ++W WP PVLL +EEG + P DK
Sbjct: 231 MLVARVCQMYPNACTASIVSRFFHIMSKWEWPQPVLLKPMEEGPI---------YPADKA 281
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 333
H MPIITP +P M +++NV+ ST IMM+EF +
Sbjct: 282 HRMPIITPGFPSMCATHNVTNSTRSIMMNEFLK 314
>gi|164423119|ref|XP_959011.2| Poly(A) polymerase [Neurospora crassa OR74A]
gi|157069956|gb|EAA29775.2| Poly(A) polymerase [Neurospora crassa OR74A]
Length = 632
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 174/408 (42%), Positives = 259/408 (63%), Gaps = 13/408 (3%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVK 62
S+ Q LG+T PIS PTD + +T L K LR +ESQ E R VL L +I
Sbjct: 2 SNPEQTLGVTPPISTTLPTDAEKRQTEALLKELRAQGTFESQAETDKRWAVLADLQRITD 61
Query: 63 IWVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
+VK+ ++ K N L+++A +IFT+GS+RLGV+GPG+DIDTL V P++ T ++ +F
Sbjct: 62 EFVKRAAQEKEPHNAILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQ-YFD 120
Query: 122 ELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--IS 175
+L EM +T+L PVP+A VP++KF++SG+SIDL++ + SL +P+D D ++
Sbjct: 121 IFPNLLVEMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLN 180
Query: 176 QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 235
+++L+ E VRSLNG RVTD+IL LVP+ + F+ LR ++ WA+RR +Y+N+ G+ G
Sbjct: 181 SNNLLRGLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPG 240
Query: 236 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPR 293
G+ WA+LVAR+CQLYP A +++V +FF + W WP PVLL IE + + VW+P+
Sbjct: 241 GVAWAMLVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPK 300
Query: 294 RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL 353
P D+ H MPIITP+YP M +++NV S++ ++ E +RG +I E + + W L
Sbjct: 301 IYPSDRNHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKR--PWKDL 358
Query: 354 FEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
FE TFF +K YL + S + W G+VESR+R L K+E H
Sbjct: 359 FEKHTFFTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLELH 406
>gi|336470057|gb|EGO58219.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2508]
gi|350290251|gb|EGZ71465.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2509]
Length = 632
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 173/402 (43%), Positives = 257/402 (63%), Gaps = 13/402 (3%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PIS A PTD + +T L K LR +ESQ E R VL L +I +VK+
Sbjct: 8 LGVTPPISTALPTDAEKRQTEALLKELRAQGTFESQAETDKRWAVLADLQRITDEFVKRA 67
Query: 69 SRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
++ K N L+++A +IFT+GS+RLGV+GPG+DIDTL V P++ T ++ +F +L
Sbjct: 68 AQEKEPHNAILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQ-YFDIFPNLL 126
Query: 128 TEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQ 181
EM +T+L PVP+A VP++KF++SG+SIDL++ + SL +P+D D ++ +++L+
Sbjct: 127 VEMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSNNLLR 186
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
E VRSLNG RVTD+IL LVP+ + F+ LR ++ WA+RR +Y+N+ G+ GG+ WA+
Sbjct: 187 GLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAM 246
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDK 299
LVAR+CQLYP A +++V +FF + W WP PVLL IE + + VW+P+ P D+
Sbjct: 247 LVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDR 306
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
H MPIITP+YP M +++NV S++ ++ E +RG +I E + + W LFE TF
Sbjct: 307 NHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKR--PWKDLFEKHTF 364
Query: 360 F-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
F +K YL + S + W G+VESR+R L K+E H
Sbjct: 365 FTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLELH 406
>gi|453087599|gb|EMF15640.1| Poly(A) polymerase [Mycosphaerella populorum SO2202]
Length = 607
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 257/396 (64%), Gaps = 8/396 (2%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M S + LG++ P+S P D +L L+ N +ES EE R+ VL +L ++
Sbjct: 1 MASQTAEYLGVSPPLSTEPPKPRDNELHDQLLAELKAQNNFESPEETAKRQNVLVKLQKL 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+ V+++ + KGLN +LL+EA KIFT+GS+RLGV+GPG+DIDTL + P+H TRE DFF
Sbjct: 61 LLQLVQRVGKKKGLNPELLKEAGGKIFTYGSFRLGVYGPGSDIDTLMLSPKHVTRE-DFF 119
Query: 121 GELHQMLTE-MP--EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ M+ + +P ++TEL PVP VP++K + G+SIDL++ L +P +L+++
Sbjct: 120 EYMPDMIRQAIPAEDITELVPVPGIGVPIIKTEIEGISIDLIWCTLHKDRVPPNLELNDS 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ E ++ +NG RVTD+IL LVP+ + FR LR ++ WA++RG+Y NV G+ GG+
Sbjct: 180 ELLRGLSETDLKCVNGTRVTDRILSLVPQTRTFRIALRAVKMWAQKRGLYGNVYGYPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNP 296
+A++VAR+CQLYP A S +V++FF V W+WP+P+ L A E+G SL Q WDP++N
Sbjct: 240 AYAMMVARVCQLYPRAAASTIVAKFFWVVKNWQWPSPIYLQAREKGPSLNQQEWDPQKNF 299
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 356
+DK HLMP+ITPAYP MN+++ ++ ST +++ E RGHEI + + W L
Sbjct: 300 RDKRHLMPVITPAYPVMNATHTITRSTKEVLIRELNRGHEIMADIYSGKK--QWRDLLIK 357
Query: 357 FTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLR 391
FF AY++Y+ I +++ DD + W G V SRLR
Sbjct: 358 HEFFTSAYQHYIVIVTASKTKDDQQAWAGLVTSRLR 393
>gi|269859597|ref|XP_002649523.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
gi|220067074|gb|EED44542.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
Length = 473
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/473 (38%), Positives = 285/473 (60%), Gaps = 17/473 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T P +L T D L +++ L +L++ + +ES+E+A +RE LGRL ++K +V++ S
Sbjct: 11 GVTGPATLDSSTKDSLEKSKILINFLKENDFFESEEDAKTRERALGRLSFLLKKFVRQQS 70
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+KG ++ I TFGSYRLGVH GADID LCV PRH +R+ DFF + L E
Sbjct: 71 LSKGET----KDCGGIICTFGSYRLGVHDKGADIDALCVVPRHISRK-DFFNIFYNQLLE 125
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
VTEL V DA+VPV+K + + IDL AR++L V+ +LD+ D++L+ DE+ +
Sbjct: 126 DSNVTELSKVEDAYVPVIKMHYMDIPIDLTMARVNLPVVDSNLDLLNDTLLKTMDEKCIL 185
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
S+NG RVTD +L L+P + F LR ++FWAKRR +Y N G+ GG+ +++ VARICQL
Sbjct: 186 SINGSRVTDSMLNLIPNKETFHMALRAIKFWAKRRYIYGNAYGYFGGVAFSISVARICQL 245
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPN +V ++F Y+ W WP P+LL I + L+VWD ++ P D+YH MPIITPA
Sbjct: 246 YPNKSSYDIVCKYFEYYSNWTWPEPILLKPIVDHHYNLKVWDNQKYPADRYHKMPIITPA 305
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
YP M S++NV ST ++ EF+R EI + + D+ +F+ FF YK Y+ I
Sbjct: 306 YPSMCSTHNVFQSTFDLICREFRRSTEI---INNSINSTDFLQIFDNTDFFRKYKLYINI 362
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 429
+ A+ + +++W G+VES++R L K E +++ P P F K C++F+G+
Sbjct: 363 KVKADK-ESIKSWSGFVESKVRILCSKFEA-VESIVAAIPFPKPF---IKDETCNFFIGI 417
Query: 430 Q-RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
+ K G + ++ + +KEF ++ + + M+I ++ ++++ F
Sbjct: 418 EILKTG---SQNKKIYVDGQIKEFIDFLNEWNGKTAIMKIEISAEKKKSMQTF 467
>gi|325180233|emb|CCA14636.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 677
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/496 (37%), Positives = 274/496 (55%), Gaps = 37/496 (7%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGL 74
I + P DL +++KL+ Y+ E+ R +L L I + WVK++ KG+
Sbjct: 20 IRVTPPEPIDLEQSKKLKDYMDKHFPTENMVNITRRSLILAELRTIFRDWVKQVCIRKGV 79
Query: 75 NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVT 134
+++ +A I GSYRLGV+ PGADIDT+CV P+ TRE DFF L ++ + +VT
Sbjct: 80 PEEIAADAGGLILVSGSYRLGVNEPGADIDTICVAPQQITRE-DFFTSLKKIFMQHSKVT 138
Query: 135 ELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGC 194
L+ + A VP++ F + ++IDL A L IPEDL+I D IL D T +SLNG
Sbjct: 139 NLNAIEGAVVPLLTFDYEEINIDLQIAILPRNTIPEDLNILNDQILVGVDAATEKSLNGP 198
Query: 195 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 254
RVT+ +++L P +F + LR +R WAKRRG+YSN G+LGG+NW +LV I QLYP A
Sbjct: 199 RVTELMIKLTPNRDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAA 258
Query: 255 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMN 314
P+ L+ RFF V W+WP + LC E+ LGL+VW+ ++YH+MPI+TPAYP MN
Sbjct: 259 PTTLLLRFFMVLANWKWPLAIQLCKTEDVKLGLEVWNANVG-NNRYHVMPILTPAYPSMN 317
Query: 315 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE 374
SS+NVST +L +M EF+R +I + + N V+WD LFE FF ++YL +D+
Sbjct: 318 SSFNVSTHSLAVMKQEFERALKIVQEI-LNRGAVEWDPLFESSDFFAVQQHYLAVDVYTT 376
Query: 375 NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH---------------------PHPGD 413
N +D + W + ESR+R+L IE Y + CH P D
Sbjct: 377 NREDEQAWCSFCESRIRKL---IESLAYIPMLCHLRAFPKRFPLSFVGQDQDEKIETPTD 433
Query: 414 FSDKSKPLY----CSYF-MGLQRKQGVPVGEGEQFDIRLTVKEFKQA-VSMYTLRKPGMQ 467
+++ K + C Y + R+Q + I +V FK + + R M
Sbjct: 434 RNNEEKETFKYGACFYVGFDIDRRQ----LRSREVSIDSSVDYFKHNDLYRWNKRSDSMD 489
Query: 468 ISVAHVTRRNLPNFVF 483
+ + V +NLP++VF
Sbjct: 490 VRITPVLWKNLPDYVF 505
>gi|340959697|gb|EGS20878.1| poly(A) polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 675
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 167/401 (41%), Positives = 254/401 (63%), Gaps = 13/401 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS A PT+++ L K LR +ES E RE+VL L++I ++VK+ +
Sbjct: 8 GVTPPISTALPTENEKRLHDALHKELRAQGTFESPAERAKREKVLAELEKITNVFVKRAA 67
Query: 70 RAKG-LNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ K N L+++A ++FT+GSYRLGV+GPG+DIDTL V P++ T E+ +F Q+L
Sbjct: 68 QEKQPKNSILIRDAIGRVFTYGSYRLGVYGPGSDIDTLVVAPKYVTVEQ-YFRIFPQVLV 126
Query: 129 EMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQN 182
EM + +L PVP+A VP++KF+F G+SIDL++ + +L +P D + ++ +++L+
Sbjct: 127 EMAPPGAIKDLTPVPEAFVPIIKFEFDGISIDLIFCSIQTLMQLPADPNWSLADNNLLRG 186
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
E VRSLNG RVTD+IL LVP+ F+ LR ++ WA+R+ +Y+N+ GF GG+ WA+L
Sbjct: 187 LSENEVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAML 246
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKY 300
VAR+CQLYP A +++V++FF + +W WP PVLL IE G + VW+P+ D+
Sbjct: 247 VARVCQLYPKATSAVIVNKFFHIMVKWPWPLPVLLKDIEYGCPVTRVAVWNPKLYASDRN 306
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M +++NV ST+ ++ E ++G +I + + W LF TFF
Sbjct: 307 HKMPIITPAYPSMCATHNVGNSTMAVIQQELEKGAQITDEIMVGRR--PWKDLFTKHTFF 364
Query: 361 -EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
+K YL + S+ W G++ESR+R L K+E H
Sbjct: 365 TNGFKYYLTVISSSRTKQAQNAWSGFIESRVRLLVNKLEMH 405
>gi|367050218|ref|XP_003655488.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
gi|347002752|gb|AEO69152.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
Length = 652
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 167/401 (41%), Positives = 258/401 (64%), Gaps = 13/401 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS A PT+ + + L LR +ES+ E R+EVL +L++I +V++ +
Sbjct: 7 GVTPPISTALPTEQEKALNKALHDELRAQGTFESRAETEKRKEVLAQLEKITNAFVQRAA 66
Query: 70 RAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
R K G N L+++A ++FT+GSYRLGV+GPG+D+DTL V P++ T E+ +F ++L
Sbjct: 67 REKHGKNAILIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQ-YFRIFPEVLV 125
Query: 129 EMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQN 182
EM +T+L PVP+A VP++KF+FSG+SIDL++ + +L +P D ++ +++L+
Sbjct: 126 EMAPPAAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLIQLPADKSWSLADNNLLRG 185
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
E VRSLNG RVTD+IL LVP+ F+ LR ++ WA+R+ +Y+N+ G+ GG+ WA+L
Sbjct: 186 LSENAVRSLNGTRVTDEILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAML 245
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLG-LQVWDPRRNPKDKY 300
VAR+CQLYP A +++V++FF + +W WP PVLL IE G + + VW+P+ D+
Sbjct: 246 VARVCQLYPKATSAVIVNKFFNIMLKWPWPLPVLLKDIEYNGPVTRVPVWNPKLYASDRN 305
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITPAYP M +++NV S++ ++ E ++G E+ E + W LF TFF
Sbjct: 306 HKMPIITPAYPSMCATHNVGRSSMVVIQQELKKGAEVTEEIMLGRR--PWKDLFTKHTFF 363
Query: 361 EA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
+ +K YL + S+ W G++ESR+R L KIE H
Sbjct: 364 TSGFKYYLTVISSSRTKKAQNVWSGFIESRVRLLVNKIEMH 404
>gi|146180895|ref|XP_001021673.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146144391|gb|EAS01427.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 1765
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/411 (39%), Positives = 256/411 (62%), Gaps = 25/411 (6%)
Query: 20 PTDDDLMRTRKLEKYLRDV--------NLYESQEEAVSREEVLGRLDQIVKIWVKKISRA 71
P D + + + EK ++ + E++EE ++E L +L QI++ W++ I A
Sbjct: 1118 PIDTSVHKQQNSEKQMQQILDVLEGEYKYSETEEETKQKDEKLKQLRQIIRDWIQAI--A 1175
Query: 72 KGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP 131
+ N QL ++ FGSY+L V+ +DIDT+C+ P R++ FFG+L +L
Sbjct: 1176 EENNHQLT--FGGELLFFGSYKLKVNSHDSDIDTVCLVPNFVDRDQHFFGDLVNILQNRK 1233
Query: 132 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 191
EVTEL P+ +A VP++K KFSG+ DL +AR E++D++ + +L + DE++ RS
Sbjct: 1234 EVTELFPIKEASVPIIKMKFSGILFDLSFARAPPQYNGENIDLTSNQMLLSMDERSYRSF 1293
Query: 192 NGCRVTDQILRL--VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
NGCRV + ++R + +NF+ TL+C++ WA RG+YSN+ G+L GI W +LVA+ICQL
Sbjct: 1294 NGCRVAEWLIRKDNIQNYENFKITLKCIKLWATNRGIYSNIIGYLSGIGWTILVAKICQL 1353
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEEG----SLGLQVWDPRRNPKDKYHLMP 304
YPN P+ L+ RFF +Y+ W+W + PV + I+E L W P +D+ +M
Sbjct: 1354 YPNYPPNQLIERFFFLYSHWKWHDLPVYVEHIQEDVANTKLNADQWRPEF--RDRNSMM- 1410
Query: 305 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 364
IITP +PCMN+++NVS +TLRI+ ++ Q G+ I ++KNE + LF+PF FF+ YK
Sbjct: 1411 IITPCFPCMNTAHNVSPTTLRIIQEQLQYGNRIINKIKKNEK--TFSDLFKPFNFFKRYK 1468
Query: 365 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN-MLQCHPHPGDF 414
++L+I+I A N +D WKG VESRLR+LT E+ +N ++Q HP+P F
Sbjct: 1469 HFLQINIVATNKNDHIVWKGHVESRLRKLTKLFEQSIHNKLIQVHPYPNPF 1519
>gi|3127182|gb|AAC16061.1| poly(A) polymerase II [Gallus gallus]
Length = 621
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/391 (45%), Positives = 246/391 (62%), Gaps = 24/391 (6%)
Query: 109 GPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVI 168
PRH R DFF ++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L I
Sbjct: 2 APRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTI 60
Query: 169 PEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYS 228
PEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YS
Sbjct: 61 PEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYS 120
Query: 229 NVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ 288
N+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L
Sbjct: 121 NILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLP 180
Query: 289 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 348
VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A
Sbjct: 181 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA-- 238
Query: 349 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML--- 405
+W LFE FF+ YK+Y+ + SA W G VES++R L +E++ + L
Sbjct: 239 EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHV 298
Query: 406 --QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS- 457
Q P P + DK + + +GL K+ E D+ ++ F +QA++
Sbjct: 299 NPQSFPAPKENPDKEE-YRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS 356
Query: 458 -MYTLRKPGMQISVAHVTRRN----LPNFVF 483
M+ + M+I+ HV R+ LPN V
Sbjct: 357 KMFEM---DMKIAARHVKRKQLHQLLPNHVL 384
>gi|355709247|gb|AES03528.1| poly polymerase gamma [Mustela putorius furo]
Length = 603
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 133 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 192
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 6 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 65
Query: 193 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 252
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 66 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 125
Query: 253 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 312
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 126 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 185
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 372
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 186 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 243
Query: 373 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-----DKSKPLYCSYFM 427
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 244 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYISMWFL 302
Query: 428 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 482
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 303 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 360
>gi|396488901|ref|XP_003842971.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
gi|312219549|emb|CBX99492.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
Length = 577
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 166/419 (39%), Positives = 253/419 (60%), Gaps = 8/419 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M ++ G+T IS AGP ++ L + L N++E+ E R++V+ L +
Sbjct: 1 MDGPKNKQYGVTSAISTAGPGPEEAKLNDSLVETLTRKNVFETPEGNKKRDDVIRHLQTV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
V+ +V+++ + KG+ + A K+FTFGSY LGVHGP +DID+L V P+ + + DFF
Sbjct: 61 VEEFVRRVCKQKGVKQAAIDVAGGKVFTFGSYALGVHGPTSDIDSLVVVPKQVSID-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQ 176
+ EM ++TEL+PV DA VP++K ++ GVS+DL++A L L +P D++ +
Sbjct: 120 RNFPSIFREMSKSEDITELNPVEDAFVPIIKMEYRGVSLDLIFASLPKLSSVPRDMETIE 179
Query: 177 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
L EQ +RS+NG RVT ++L VP +FR LR ++ W+ RG+Y V G+ GG
Sbjct: 180 KKNLDGLAEQAMRSVNGTRVTKELLAAVPHPGSFRHALRAIKLWSNERGIYGAVFGYPGG 239
Query: 237 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 296
+ WA++VARICQLYP A + +VS+FF + +W WP PVLL IEEG++GL+VW+P+
Sbjct: 240 VAWAIMVARICQLYPFANGATIVSKFFSLMQKWSWPRPVLLKHIEEGAMGLRVWNPQIYH 299
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 356
D+ HLMPIITPA+P M S++ V STLRIM +EFQR +I + + WD LFE
Sbjct: 300 GDRSHLMPIITPAFPSMCSTHTVMPSTLRIMQEEFQRADQIMQHIFAGTK--TWDALFER 357
Query: 357 FTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
+FF + +K YL I ++ + + G V+S++R + I+ + P+P F
Sbjct: 358 HSFFTKDHKYYLTIVAASRTQEAHERFNGLVQSKVRHIVKGIDDGQTGIDTARPYPKCF 416
>gi|367027594|ref|XP_003663081.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
gi|347010350|gb|AEO57836.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
Length = 654
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/401 (40%), Positives = 259/401 (64%), Gaps = 13/401 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS A PT+++ L + LR +ES E R+EVL +L++I ++V++ +
Sbjct: 7 GVTPPISTALPTEEEKRLNNALHQELRAQGTFESPAETEKRKEVLRQLEKITNVFVQRAA 66
Query: 70 RAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
K N L+++A ++FT+GSYRLGV+GPG+D+DTL V P++ T E+ +F ++L
Sbjct: 67 AEKEPKNTILIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQ-YFRIFPEVLV 125
Query: 129 EMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQN 182
EM +T+L PVP+A VP++KF+FSG+SIDL++ + +L +P D + ++ +++L+
Sbjct: 126 EMAPPGAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPADKNWSLADNNLLRG 185
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
E VRSLNG RVTD IL LVP+ F+ LR ++ WA+R+ +Y+N+ G+ GG+ WA+L
Sbjct: 186 LSENEVRSLNGTRVTDDILNLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAML 245
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKY 300
VAR+CQLYP A +++V++FF + +W WP PVLL IE G + VW+P+ D+
Sbjct: 246 VARVCQLYPKATSAVIVNKFFHIMLKWPWPLPVLLKDIEYGCPVTRVAVWNPKIYASDRN 305
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITP+YP M +++NV S++ ++ DE ++G ++ E + + + W LF TFF
Sbjct: 306 HRMPIITPSYPSMCATHNVGRSSMAVIKDELEKGVQVTEDIMRGKR--PWKDLFTKHTFF 363
Query: 361 EA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
+ ++ YL + S+ W G+VESR+R L K+E H
Sbjct: 364 TSGFRYYLTVISSSRTKKAQNVWSGFVESRVRLLVNKLEMH 404
>gi|189208746|ref|XP_001940706.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976799|gb|EDU43425.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 579
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/524 (35%), Positives = 281/524 (53%), Gaps = 51/524 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ G+T IS A PT+ D+ + L L+D N++E+ E RE VL + +V+ +V+
Sbjct: 9 RQFGVTSAISEAPPTEQDIRKNDSLITTLKDENVFETPEGNQQRESVLKDIQNVVEEFVR 68
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++ + KG+ ++ A KIFTFGS+ LGVHGP +DIDTL V P+ + + DFF
Sbjct: 69 RVGKKKGVQQSIIDAAGGKIFTFGSFALGVHGPKSDIDTLVVAPKFVSID-DFFAIFPST 127
Query: 127 LTEM---PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLW-VIPEDLDISQDSILQN 182
E+ ++ E PV DA VP++K ++ GVSIDLL+ L IP ++ + L+
Sbjct: 128 FKELCNEKDIQEFVPVEDAFVPIIKMEYQGVSIDLLFCSLPKRPSIPLNMTTIEKKDLEG 187
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
E RS+NG RVT+++L VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++
Sbjct: 188 LSESATRSVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIM 247
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 302
VARICQLYP A + +VS+FF + +W WP PV+L IEEG +GL+VW+P+ D+ HL
Sbjct: 248 VARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHL 307
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-E 361
MPIITPA+P M +++ V STLRIM +EF R I + + N+ DW LFE TFF +
Sbjct: 308 MPIITPAFPSMCATHTVMPSTLRIMKEEFGRADSILQDIFANKK--DWKALFERHTFFTK 365
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH----------- 410
+K YL + ++ + + G V+S++R + I+ + P+
Sbjct: 366 DHKYYLSVVAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERAHRIT 425
Query: 411 ----------------PGDFSDKSKPL----------YCSYFMGLQRKQGVPVGEG-EQF 443
P +D L ++++GL +P GE +
Sbjct: 426 DDQFKEVAQGSLDYLIPKSEADAEGTLEANGDTTIVHTTTFYIGLT----LPTGEATKSL 481
Query: 444 DIRLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVFPGG 486
DI V +FK ++ L M + V H LP+ VF G
Sbjct: 482 DISYPVSQFKSYITDSDLYNEDLMSVKVVHTRSSALPDDVFVEG 525
>gi|336268304|ref|XP_003348917.1| hypothetical protein SMAC_01938 [Sordaria macrospora k-hell]
gi|380094176|emb|CCC08393.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 632
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/401 (42%), Positives = 258/401 (64%), Gaps = 11/401 (2%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG+T PIS A PTD + +T L K LR +ESQ E R VL L +I +VK+
Sbjct: 8 LGVTPPISTALPTDAEKRQTDALFKELRAQGTFESQAETEKRWAVLADLQRITDEFVKRA 67
Query: 69 SR-AKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREE--DFFGELHQ 125
++ ++ N L+++A +IFT+GS+RLGV+GPG+DIDTL V P++ T ++ D F +L +
Sbjct: 68 AQESEPHNSILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQYFDIFPKLLE 127
Query: 126 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQN 182
+ +T+L PVP+A VP++KF++SG+SIDL++ + SL +P+D + ++ +++L+
Sbjct: 128 EMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKEWNLNNNNLLRG 187
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
E VRSLNG RVTD+IL LVP+ + F+ LR ++ WA+RR +Y+N+ G+ GG+ WA+L
Sbjct: 188 LSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAML 247
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKY 300
VAR+CQLYP A +++V +FF + W WP PVLL IE + + VW+P+ P D+
Sbjct: 248 VARVCQLYPKATSAVVVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRN 307
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
H MPIITP+YP M +++NV S++ ++ E +RG +I E + + W LFE TFF
Sbjct: 308 HKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQIAEEIMLGKR--PWKDLFEKHTFF 365
Query: 361 -EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
+K YL + S + W G+VESR+R L K+E H
Sbjct: 366 TNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLELH 406
>gi|449296009|gb|EMC92029.1| hypothetical protein BAUCODRAFT_78629 [Baudoinia compniacensis UAMH
10762]
Length = 594
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/404 (38%), Positives = 245/404 (60%), Gaps = 7/404 (1%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ G+T+P S PT DL L L+ + + + R+ V+ +L +++ V+
Sbjct: 5 KQWGVTQPFSNDAPTPADLKLNDSLIAELKAQDNFPPSSDTERRDAVIAKLKGLLRQMVQ 64
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+ + KGL +L+ A +++T+GS+RLGV+GP +D+DTL V P+H TREE FF + +
Sbjct: 65 IVGKKKGLPAGILETAGGEVYTYGSFRLGVYGPNSDVDTLMVAPKHVTREE-FFEYMPDL 123
Query: 127 LTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
L + E+TEL PVP P++K K GV IDL++ L + +P+ +D++ D++L+
Sbjct: 124 LRKSAAPGEITELVPVPGIGTPIIKLKIQGVDIDLIFCSLQVQSVPDKMDLADDNLLRGL 183
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D+ VR +NG RVT++IL+LVP+ + FR LR ++ WA+RR +Y N+ G+ GG+ WA+LV
Sbjct: 184 DDTDVRCVNGTRVTNRILQLVPQTKTFRYALRAIKLWAQRRAIYGNIVGYPGGVAWAILV 243
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
AR+CQLYP AV ++V RFF + +W WP PV L E SL ++ WDP + D HLM
Sbjct: 244 ARVCQLYPKAVAPLIVQRFFFIVKRWNWPKPVFLQHKVESSLVIREWDPNTSRHDAGHLM 303
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EA 362
PI+TPA P N+++ V ST +MM E +RG +I + W LFE FF A
Sbjct: 304 PILTPAVPSTNTAHTVGPSTKMVMMRELERGEQIIADIYSKSK--PWKALFERHNFFTTA 361
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 406
YK+Y+ + ++++ D W G V+S+++ L IE N ++
Sbjct: 362 YKHYICVVTASKSKDAQDAWAGLVQSKIKWLVQGIESSDANSIE 405
>gi|169598326|ref|XP_001792586.1| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
gi|160704377|gb|EAT90176.2| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
Length = 575
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 290/531 (54%), Gaps = 49/531 (9%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + GIT IS A PT+ D L + L +N++E+ E REEVL + ++
Sbjct: 1 MDEPKKPKWGITHSISEAPPTEADNKLNDNLIETLTRLNVFETLEGNKRREEVLAHVQKV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF- 119
V+ +V++ + KG+ L A KIF FGSY LGVHGP +DIDTL V P+H E+ F
Sbjct: 61 VEEFVRRAGKLKGIAQSTLDVAGGKIFFFGSYALGVHGPTSDIDTLIVVPKHVFIEDFFK 120
Query: 120 -FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQD 177
F + + L+ +++EL PV DA+VP++K ++ GVS+DLL+A + ++ +P++L+
Sbjct: 121 IFPSIFRELSNAEDISELVPVEDAYVPIIKMEYRGVSLDLLFASMPTMSSVPKELETVDK 180
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
S+L++ +E T+RS+NG RV ++L VP+ ++FR LR ++ WA RR +Y V G+ GGI
Sbjct: 181 SVLRHLEETTIRSVNGTRVVKELLSSVPQRRHFRYALRAVKLWANRRAIYGAVFGYPGGI 240
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN-- 295
WA++VARICQLYP A + ++S+FF + +W+WP PV+L E GL+VW+P
Sbjct: 241 AWAIMVARICQLYPMACGATILSKFFNLMHKWQWPRPVMLKEHELPEFGLRVWNPAHQSY 300
Query: 296 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 355
P D HLMP+ITPA+P M S++ V+TST +IMM+EFQR +I + + W+ LF
Sbjct: 301 PPDARHLMPVITPAFPAMCSTHTVTTSTKQIMMEEFQRADKIVRDVFNGQG--TWEALFN 358
Query: 356 PFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
+FF + +K YL + ++ + + G V+S++R L I+ + P P F
Sbjct: 359 NHSFFTQDHKYYLSVIAASRTKEADLTFHGLVQSKVRLLVAGIDDGQTGIDMARPFPEGF 418
Query: 415 ---------------------------------SDKSKPLYC-SYFMGLQRKQGVPVGEG 440
+ + +Y ++++GL+ + E
Sbjct: 419 ERVHRCKNEDEVEAVTKGSLDYMIPVSQVPAAGTTEDHIIYTMTFYIGLRLPK-----ER 473
Query: 441 EQFDIRLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVF-PGGVRP 489
DI F+ ++ L G M + V H LP+ +F PG VRP
Sbjct: 474 STLDISYITNHFRSKITESKLYDEGTMSVKVVHTRNTALPDDLFKPGEVRP 524
>gi|330915746|ref|XP_003297151.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
gi|311330327|gb|EFQ94750.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
Length = 566
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/408 (39%), Positives = 247/408 (60%), Gaps = 6/408 (1%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ G+T IS A PT+ D+ + L L+D N++E+ E RE VL + +V+ +V+
Sbjct: 9 RQFGVTSAISEAPPTEQDIRKNDSLITTLKDENVFETPEGNQQRESVLKDIQNVVEEFVR 68
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF--FGELH 124
++ R KG+ ++ A KIFTFGS+ LGVHGP +DIDTL V P+ + ++ F F
Sbjct: 69 RVGRKKGVQQPIIDAAGGKIFTFGSFALGVHGPSSDIDTLVVAPKFVSIDDFFALFPPTF 128
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLW-VIPEDLDISQDSILQNA 183
+ L + ++ E PV DA VP++K ++ GVSIDLL+ L IP + L+
Sbjct: 129 RELCDEKDIQEFVPVEDAFVPIIKMQYQGVSIDLLFCSLPKRPSIPSKMTTIDKKDLEGL 188
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
E RS+NG RVT+++L VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++V
Sbjct: 189 SESATRSVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMV 248
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYP A + +VS+FF + +W WP PV+L IEEG +GL+VW+P+ D+ HLM
Sbjct: 249 ARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLM 308
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EA 362
PIITPA+P M +++ V STLRIM +EF R +I + + N+ DW LFE TFF +
Sbjct: 309 PIITPAFPSMCATHTVMPSTLRIMKEEFGRADKILQDIFANKK--DWKALFERHTFFTKD 366
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH 410
+K YL + ++ + + G V+S++R + I+ + P+
Sbjct: 367 HKYYLSVVAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPY 414
>gi|238583172|ref|XP_002390161.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
gi|215453244|gb|EEB91091.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
Length = 309
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/288 (53%), Positives = 201/288 (69%), Gaps = 1/288 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS A T+ + T L + LR +ES+EEA +RE VLGR+ +VK +VKK+
Sbjct: 3 GVTPPISTAESTEREKEVTESLMEELRQQGTFESEEEAQTRELVLGRVSALVKKFVKKVG 62
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
A+GL++ A KIFTFGSYRLGVHGP +DIDTLCV P+H RE DFF ML E
Sbjct: 63 MARGLSEAAATAAGGKIFTFGSYRLGVHGPSSDIDTLCVVPKHVQRE-DFFEVFEPMLRE 121
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
TE+ VP+A+VP++ SG+ +D L ARL+L IPEDL + D++L+N DE+ VR
Sbjct: 122 FEGATEVAGVPEAYVPIITANISGIPLDFLMARLALSSIPEDLSLQDDNLLRNIDERCVR 181
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SL G RV ++ILRLVP +Q FR +LRC++ WA+RR +YSNV GF GG+ WA++VARICQL
Sbjct: 182 SLGGSRVANEILRLVPNVQVFRDSLRCIKLWAQRRAIYSNVNGFFGGVAWAMVVARICQL 241
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
YPNA+ +VSRFF + QW WP PVLL IEEG L ++VW+P+ K
Sbjct: 242 YPNAIAGAIVSRFFIIMYQWTWPQPVLLKQIEEGPLQVRVWNPKVRVK 289
>gi|452002314|gb|EMD94772.1| hypothetical protein COCHEDRAFT_1167952 [Cochliobolus
heterostrophus C5]
Length = 578
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 183/533 (34%), Positives = 287/533 (53%), Gaps = 65/533 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ G+T IS A PT+ D+ KL + L+ N++E+ E REEV+ + ++V+ +++
Sbjct: 9 RQFGVTSAISEAAPTEHDIKLNDKLIETLKAENVFETPEGNRRREEVIEHIQKVVEEFIR 68
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
++ + KG+ ++ A KIFTFGSY LGVHGP +DIDTL V P+ F +H+
Sbjct: 69 RVGKQKGVQQSVIDAAGGKIFTFGSYALGVHGPSSDIDTLVVAPK--------FVAIHEF 120
Query: 127 ----------LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDIS 175
++ + ++ E PV DA VP++K ++ VSIDLL+A L IP ++D
Sbjct: 121 FEFFPPTFREMSNVDDINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTI 180
Query: 176 QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 235
+ L+ E RS+NG RVT+++L VP+ +FR LR ++ W+ RRG+Y V G+ G
Sbjct: 181 EKKDLEGLSESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPG 240
Query: 236 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN 295
G+ WA++VARICQLYP A + +VS+FF + +W WP PV+L IEEG LGL+VW+P+
Sbjct: 241 GVAWAIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVY 300
Query: 296 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 355
D+ HLMPIITPA+P M +++ V STLRIM DEF R +I + + DW+ LFE
Sbjct: 301 GGDRAHLMPIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTK--DWNALFE 358
Query: 356 PFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH---- 410
+FF + +K YL + ++ + + G V+S++R + I+ + P+
Sbjct: 359 RHSFFTKDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYF 418
Query: 411 ----------------------------PGDFS----DKSKPLY-CSYFMGLQRKQGVPV 437
P D + D + +Y ++++GL +P
Sbjct: 419 ERYHRCKDDQFHEVTQGSLEYMIPASEVPADGTAPADDDTHIIYTTTFYIGLT----LPP 474
Query: 438 GEGEQFDIRLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVF-PGGVR 488
+ DI V +F+ ++ L M + V H LP+ VF PG R
Sbjct: 475 DATKSLDISYPVSQFRSYITDSDLYDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|295664146|ref|XP_002792625.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278739|gb|EEH34305.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 168/418 (40%), Positives = 248/418 (59%), Gaps = 41/418 (9%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M +++ ++ G+T PIS A PT ++ L L+ N +ES E R++ L + ++
Sbjct: 1 MAAASVRQWGVTPPISTALPTTSEIAANDDLTTELKQQNNFESPSETERRKQTLHLIQRV 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+VK +SR KGL+ + A KIFT+GSYRLGV+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDIAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 121 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
+ +L +M + +L PVPDA VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPLLEQMAPKGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNK 179
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
WA+LVAR IEEG L ++VW+P+
Sbjct: 240 AWAMLVAR---------------------------------PIEEGPLQMKVWNPKIYHG 266
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D+YHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 267 DRYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQ--LTWNDLFTRH 324
Query: 358 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
TFF + YK YL I S+ + W G VES+LR L ++R + ++ HP P F
Sbjct: 325 TFFSQDYKYYLSITSSSRGKEAQSVWSGLVESKLRHLVGALDRKS-SIEVAHPFPKGF 381
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 424 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFV 482
+Y++GL+ K P G DI + FK + + +PG+ + + HV +LP V
Sbjct: 452 TYYIGLELKPLAP-GAARSLDISTDTQIFKSTCTSWPQYQPGINDLHITHVRNYDLPEDV 510
Query: 483 FPGG-VRPSRPSKGTWDSRRALERKVSSHT 511
F G VRPSRP K T +K S H+
Sbjct: 511 FQSGEVRPSRPKKKTLKKTEPTAQKRSIHS 540
>gi|358332465|dbj|GAA51116.1| poly(A) polymerase, partial [Clonorchis sinensis]
Length = 1210
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/330 (48%), Positives = 219/330 (66%), Gaps = 4/330 (1%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
Q LG T +S PT+ DL +++LE L ++++E+ EE R E L RL +I W+K
Sbjct: 882 QCLGETGALSFKKPTEQDLKDSQELETTLAQLDIFETPEEITQRREALMRLQEISNKWIK 941
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+ + + L + + KIFTFGSYRLGV+ GAD+D+L V PR TR+E FF E +
Sbjct: 942 QKAVEQNLPPHVAKATTGKIFTFGSYRLGVNFKGADVDSLLVVPRFITRQE-FFSEFQSV 1000
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS--ILQNAD 184
L+E P V ++H V DA VPV+K KF GV IDLL+A++ I E+ ++ +++ +++N D
Sbjct: 1001 LSENPHVEDIHAVVDAFVPVLKLKFMGVEIDLLFAQIDQMNIAENFNLCENTEVLMRNMD 1060
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
E VRS+NG RV + IL LV +F+ L+ +RFWAKRR +YSN GFLGG++WA+LV+
Sbjct: 1061 EHDVRSINGVRVNEDILNLVYNKNSFKVALKVIRFWAKRRNIYSNTLGFLGGVSWAILVS 1120
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLM 303
RICQLYP A PSMLV FF++++QW WP PV L E SL L VWDPR N D+YHLM
Sbjct: 1121 RICQLYPYASPSMLVYLFFKIFSQWPWPKPVRLRESEYIPSLCLPVWDPRLNLMDQYHLM 1180
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQR 333
PI+TP+YP NS+YNV S I+ E ++
Sbjct: 1181 PILTPSYPSQNSAYNVQRSNRIILERELKQ 1210
>gi|451845399|gb|EMD58712.1| hypothetical protein COCSADRAFT_265597 [Cochliobolus sativus
ND90Pr]
Length = 571
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 287/525 (54%), Gaps = 49/525 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ G+T IS A PT+ D+ KL + L+ N++E+ E REEV+ + ++V+ +++
Sbjct: 9 RQFGVTSAISEAAPTEHDIKLNDKLIETLKAENVFETPEGNRRREEVIEHIQKVVEEFIR 68
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHAT--REEDFFGELH 124
++ + KG+ ++ A KIFTFGSY LGVHGP +DIDTL V P+ +FF
Sbjct: 69 RVGKQKGVQQSVIDAAGGKIFTFGSYALGVHGPSSDIDTLVVAPKFVAIHEFFEFFPPTF 128
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNA 183
+ ++ + ++ E PV DA VP++K ++ VSIDLL+A L IP ++D + L+
Sbjct: 129 REMSNVDDINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIEKKDLEGL 188
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
E RS+NG RVT+++L VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++V
Sbjct: 189 SESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMV 248
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
ARICQLYP A + +VS+FF + +W WP PV+L IEEG LGL+VW+P+ D+ HLM
Sbjct: 249 ARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLM 308
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EA 362
PIITPA+P M +++ V STLRIM DEF R +I + + DW+ LFE +FF +
Sbjct: 309 PIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTK--DWNALFERHSFFTKD 366
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH------------ 410
+K YL + ++ + + G V+S++R + I+ + P+
Sbjct: 367 HKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRCKD 426
Query: 411 --------------------PGDFS----DKSKPLY-CSYFMGLQRKQGVPVGEGEQFDI 445
P D + D + +Y ++++GL +P + DI
Sbjct: 427 DQFHEVTQGSLEYMIPASEVPADGTAPADDDTHIIYTTTFYIGLT----LPPDATKSLDI 482
Query: 446 RLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVF-PGGVR 488
V +F+ ++ L M + V H LP+ VF PG R
Sbjct: 483 SYPVSQFRSYITDSDLYDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|147856999|emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 268/459 (58%), Gaps = 27/459 (5%)
Query: 27 RTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKI 86
R+ L +++ + L S EE + R+ V+ +L +IV WVK+++ + Q + +A I
Sbjct: 116 RSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQRPKQQIAVTSATI 175
Query: 87 FTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 146
T+GSY LGVHGP +DID LCVGP A+ +DFF L ML PEV+E+H V DA VP+
Sbjct: 176 LTYGSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPL 235
Query: 147 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 206
M+FKF G+S+DL YA+L L +PE+L++ L+N DE + +SL+G R + IL+LVP
Sbjct: 236 MRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPN 295
Query: 207 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 266
++NF++ LRC++ WAKRRGVY N+ G+ GG++ A+L A +CQ P+A ++L+S FF+ +
Sbjct: 296 VENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTF 355
Query: 267 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 326
+ W WP PV A+E+G L P ++ LMPI P P N++ ST
Sbjct: 356 SGWPWPTPV---ALEDGRL------PTGGTRETRALMPIQLPCSPYGYCHSNITKSTFYR 406
Query: 327 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 386
+ E GH + + + D DW+ +FEPF + + Y +++I +S+ N D+L +W GWV
Sbjct: 407 ITTELTLGHALTRDLLR--LDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWV 464
Query: 387 ESRLRQLTLKIERHTYNMLQ--CHPHPGDF--SDKSKPLYCSYFMGLQRKQGVPVGEGEQ 442
+SR R L K+E +Q C P+P +F D +P +F G+Q G
Sbjct: 465 KSRFRFLLAKVEE-----VQGLCDPNPTEFIDPDAGEP-NVVFFWGVQP------GRINF 512
Query: 443 FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
DI + +F Q ++ + P +++++ + LP +
Sbjct: 513 SDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGY 551
>gi|167536365|ref|XP_001749854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771569|gb|EDQ85233.1| predicted protein [Monosiga brevicollis MX1]
Length = 604
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/533 (34%), Positives = 286/533 (53%), Gaps = 71/533 (13%)
Query: 28 TRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAK-GLNDQLLQEANAKI 86
T+ LE L + ++ E R VL +L+++V+ WVKK S+ + ++ + +A++
Sbjct: 4 TKALEAALEPEGVIDTDENMQQRCLVLSKLNELVQAWVKKASKEEYNFEEEAANQVDARL 63
Query: 87 FTFGSYRLGVHG----------------PGADIDTLCVGPRHATREEDFFGELHQMLTEM 130
FTFGSYRLGV DIDTL P H RE FFG +Q+L E
Sbjct: 64 FTFGSYRLGVQSRYDMSSIQLFQMQFSRDAGDIDTLLCFPHHIKRES-FFGTFYQLLKET 122
Query: 131 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE-QTVR 189
P VT+LH A VPV+K GV +DLL+A L + + L + +L+ E + +R
Sbjct: 123 PGVTDLHAAEGAFVPVIKLAMDGVELDLLFASLPVDRLEPTLSLQDVDLLKKIHEDEIMR 182
Query: 190 SLNGCRVTDQILRLVP-KIQNFRTTLRCMRFWAKR-------------RGVYSNVAGFLG 235
S+NGCRV D +L ++P +Q FRT LR ++ WAK RGVYSNV G+ G
Sbjct: 183 SINGCRVADAVLEVMPSNLQTFRTALRAVKLWAKHNLTRSNQTVRTSGRGVYSNVHGYFG 242
Query: 236 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQW-----------------RWPN-PVLL 277
GI+ +LV RICQLYPNA S ++ +FFRVY+ W W N P+ +
Sbjct: 243 GIHLVILVTRICQLYPNAAASTILCKFFRVYSDWYGSNWIKHAREIWLAHGEWMNSPIKI 302
Query: 278 CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 337
+++ LG + WDPR NP+D+Y LMPIITP YP N+++NV+ STL ++ EF RGH +
Sbjct: 303 KDVDDLHLGKRQWDPRSNPRDRYDLMPIITPVYPQQNAAFNVNESTLHRIVTEFSRGHRV 362
Query: 338 CEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKI 397
C+ + + ++V W ++EP FF+ Y+ ++R+ SA D ++G VES +R L L +
Sbjct: 363 CQDIMRASSNVPWSAVWEPIRFFDEYQYFVRVVASAATESDRTEFEGLVESTVRHLVLNL 422
Query: 398 ERHTYNMLQCHPHPGDF-----SDK------SKPLYCSYFMGLQ---RKQGVPVGEGEQF 443
+ +T N+ +P + +DK + P ++++ L+ +++G +
Sbjct: 423 Q-YTDNVAYAMAYPKAYHEDPVADKDGTEATTGPWRTAWYLALEFGIKQEGRIEPAPSKL 481
Query: 444 DIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 491
D++ + F + V+M + M + V + + LP +++PGGV P R
Sbjct: 482 DLQGPLVAFYGRLRDRTVTMSRYDETTMNVDVQAMKQSKLPGYLYPGGVNPHR 534
>gi|225432026|ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 170/458 (37%), Positives = 267/458 (58%), Gaps = 25/458 (5%)
Query: 27 RTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKI 86
R+ L +++ + L S EE + R+ V+ +L +IV WVK+++ + Q + +A I
Sbjct: 75 RSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQRPKQQIAVTSATI 134
Query: 87 FTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 146
T+GSY LGVHGP +DID LCVGP A+ +DFF L ML PEV+E+H V DA VP+
Sbjct: 135 LTYGSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPL 194
Query: 147 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 206
M+FKF G+S+DL YA+L L +PE+L++ L+N DE + +SL+G R + IL+LVP
Sbjct: 195 MRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPN 254
Query: 207 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 266
++NF++ LRC++ WAKRRGVY N+ G+ GG++ A+L A +CQ P+A ++L+S FF+ +
Sbjct: 255 VENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTF 314
Query: 267 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 326
+ W WP PV A+E+G L P ++ LMPI P P N++ ST
Sbjct: 315 SGWPWPTPV---ALEDGRL------PTGGTRETRALMPIQLPCSPYGYCHSNITKSTFYR 365
Query: 327 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 386
+ E GH + + + D DW+ +FEPF + + Y +++I +S+ N D+L +W GWV
Sbjct: 366 ITTELTLGHALTRDLLR--LDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWV 423
Query: 387 ESRLRQLTLKIERHTYNMLQ--CHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEGEQF 443
+SR R L K+E +Q C P+P +F D + +F G+Q G
Sbjct: 424 KSRFRFLLAKVEE-----VQGLCDPNPTEFIDPDAGGPNVVFFWGVQP------GRINFS 472
Query: 444 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 481
DI + +F Q ++ + P +++++ + LP +
Sbjct: 473 DIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGY 510
>gi|55726267|emb|CAH89905.1| hypothetical protein [Pongo abelii]
Length = 304
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 156/284 (54%), Positives = 202/284 (71%), Gaps = 1/284 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRVLILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 293
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|187469283|gb|AAI67010.1| Papola protein [Rattus norvegicus]
Length = 317
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 156/284 (54%), Positives = 202/284 (71%), Gaps = 1/284 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 293
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|1377872|gb|AAC52609.1| poly(A) polymerase V, partial [Mus musculus]
Length = 303
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 156/284 (54%), Positives = 202/284 (71%), Gaps = 1/284 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 7 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 66
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 67 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 125
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 126 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 185
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 186 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 245
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 293
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR
Sbjct: 246 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 289
>gi|119602052|gb|EAW81646.1| poly(A) polymerase alpha, isoform CRA_d [Homo sapiens]
Length = 317
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 156/284 (54%), Positives = 202/284 (71%), Gaps = 1/284 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 293
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|255556450|ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis]
Length = 492
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 235/391 (60%), Gaps = 13/391 (3%)
Query: 27 RTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKI 86
R+ L K++ + L S E R+ V+ L QIV W KK++ + L + NA I
Sbjct: 5 RSLSLLKFMANEGLVPSPREEEKRKNVILNLKQIVVAWAKKVAWQRRLPRLQIASTNATI 64
Query: 87 FTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 146
T+GSY LGV+GP +DID +CVGP AT EDFF L ML PEV+ +H V DA VP+
Sbjct: 65 LTYGSYGLGVYGPESDIDAICVGPFFATLAEDFFIVLRNMLKNRPEVSNIHCVKDAKVPL 124
Query: 147 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 206
M+FKF G+SIDL YA+L + +P+++D+ L N DE + +SL+G R +IL+ VP
Sbjct: 125 MRFKFDGISIDLPYAQLKVLAVPDNVDMLNPFFLMNIDETSWKSLSGVRANQRILQFVPN 184
Query: 207 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 266
++NF++ LRC++ WA+RRGV N+ GFLGG++ A+L A +CQ YPNA S L+S FF Y
Sbjct: 185 LENFQSMLRCIKLWARRRGVCGNLNGFLGGVHLAILSAVVCQKYPNASVSALISNFFATY 244
Query: 267 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 326
W WP PV+L ++G + P + + MPI P P N++ ST
Sbjct: 245 ATWPWPTPVML---QDG-----MSSPAEDFIETRSFMPIRLPCSPHEYCHSNITKSTYYR 296
Query: 327 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 386
+ EF RGH + + + K D DW+ +FEPF + + Y +++I +SA + D++ +W GWV
Sbjct: 297 IRTEFLRGHSLTKDLLK--PDFDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEVGDWVGWV 354
Query: 387 ESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
+SR R L LK+E QC P P +++D+
Sbjct: 355 KSRFRALLLKLEGLQG---QCDPSPVEYADR 382
>gi|397574427|gb|EJK49202.1| hypothetical protein THAOC_31949 [Thalassiosira oceanica]
Length = 843
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 191/519 (36%), Positives = 275/519 (52%), Gaps = 58/519 (11%)
Query: 20 PTDDDLMRTRKLEKYLRDVNL-YESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQL 78
PT +L L+K++ D N+ ES E +RE VL ++ ++ + WV+ ++ +GL+
Sbjct: 27 PTPAELSFQSTLQKFV-DANVSLESSEGIKTRERVLVQMGRLHREWVRSVAIKRGLSPDA 85
Query: 79 LQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE---------------- 122
A +++T GSYRLGVH PGADIDT+ V P +R+ DFFG
Sbjct: 86 ADSAGGELYTSGSYRLGVHEPGADIDTIAVAPSFCSRD-DFFGSNYVPPGDAMDEGDDED 144
Query: 123 ---------LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD 173
L + + P VT PV +A VP++ F + G++IDLL+ARLS IP + D
Sbjct: 145 GEQARDPDSLAERIRRQPHVTNFVPVENAAVPILTFDWEGINIDLLFARLSTSSIPRNFD 204
Query: 174 ISQDSILQNADEQTVRSLNGCRVTDQILRLV----PKIQNFRTTLRCMRFWAKRRGVYSN 229
I D +L D T +SLNG RVT+ I LV + Q F T +R +R WAK RG+YSN
Sbjct: 205 IDNDLVLSGVDAATEKSLNGPRVTNLIAALVGGTEQRYQTFLTVVRLVRKWAKNRGLYSN 264
Query: 230 VAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQV 289
G+ GG+N + VA + QLYPNA P+ + +FF V+ WRWPNPV+L + LGLQV
Sbjct: 265 KMGYWGGVNINMAVALVLQLYPNACPASALRKFFLVFKSWRWPNPVMLTRPHDAELGLQV 324
Query: 290 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEK------ 343
W+ + + + P+ITPAYP MNS+ +VS TL+I+ +EF RGH I + + K
Sbjct: 325 WNSHQ-AANMRQVAPMITPAYPAMNSTLSVSRQTLQILHEEFCRGHGIVDKLYKDYQRGA 383
Query: 344 -NEADVD----WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 398
+ ADV+ W LFEP FF AY YL + I+ D + W G+VESRLR+L +
Sbjct: 384 IDPADVESGGMWGELFEPSDFFIAYPYYLSLCITGPTLHDAQAWAGFVESRLRKLVSDML 443
Query: 399 RHTYNMLQCHPHPGDF----SDKSKPLY-------CSYFMGLQRKQGVPVGEGEQFDIRL 447
+ + + P F +DK+ L +YF+G + + GEQ DI
Sbjct: 444 GRSLPLSKIQLWPKKFDVCCADKTALLTHAQRANSITYFIGFRVDK--LRMRGEQLDIER 501
Query: 448 TVKEFKQ-AVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
+ F++ + + PGM I + LP F G
Sbjct: 502 QLSNFRKFELGRFHPLVPGMDILPKSFGVKELPTICFDG 540
>gi|302499084|ref|XP_003011538.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
gi|291175090|gb|EFE30898.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
Length = 700
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 296/594 (49%), Gaps = 122/594 (20%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEA------------- 47
M +S ++ GIT P+S A PT +L L L+ N +E E
Sbjct: 1 MAASQSRQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRFVWLFKNAFA 60
Query: 48 ----------VSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVH 97
R++ L L ++ ++K +S+ KGL+ + +
Sbjct: 61 CLGNTNSSGLFFRKQTLHLLQRVTIEFIKVVSKEKGLSQAAIDASG-------------- 106
Query: 98 GPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGV 154
G+DIDTL V P+H RE DFF +L + + ++ PVPDA VP++K + SG+
Sbjct: 107 --GSDIDTLVVAPKHVMRE-DFFAHFPAVLEKHAPKDAIEKMTPVPDAFVPIIKIEISGI 163
Query: 155 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 214
SIDL++ARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR L
Sbjct: 164 SIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLAL 223
Query: 215 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 274
R ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+ QW WP P
Sbjct: 224 RAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQP 283
Query: 275 VLLCAIEEGSLGLQVWDPRRN-------PK------------DKYHLMPIITPAYPCMNS 315
VLL IE+G L ++VW+P+ PK D++HLMPIITPAYP M +
Sbjct: 284 VLLKHIEDGPLHMKVWNPKVGSQLCFFIPKALTDFSFQIYHGDRFHLMPIITPAYPSMCA 343
Query: 316 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAE 374
++NVS ST +++ E +RG ++ + + + W LF +FF A YK YL I+ ++
Sbjct: 344 THNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINSTST 401
Query: 375 NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-------------------- 414
+ + W G VES+LR L ++R + ++ HP P F
Sbjct: 402 SKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGFERVHICKTDEEVDAVKAGSM 460
Query: 415 ---SDKSK---------PLYCSYFMGLQRKQGV-----PVGEGEQF-------------- 443
+D +K P + + G+ P GE +
Sbjct: 461 KYQADDTKTATTDETNDPTHIAAAENANENVGIAEAEKPTGENKYTLYTTTYYIGLELKP 520
Query: 444 ---DIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSRP 492
DI FK + + +PG+ ++++HV +LP+ VF PG RP+RP
Sbjct: 521 LAPDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQPGEARPTRP 574
>gi|302665415|ref|XP_003024318.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
gi|291188368|gb|EFE43707.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
Length = 599
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 192/595 (32%), Positives = 296/595 (49%), Gaps = 123/595 (20%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEA------------- 47
M +S ++ GIT P+S A PT +L L L+ N +E E
Sbjct: 1 MAASQSRQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRFVWLIKMLLT 60
Query: 48 ----------VSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVH 97
V R++ L L ++ ++K +S+ KGL+ + +
Sbjct: 61 CLGNTNSSGLVFRKQTLHLLQRVTIEFIKVVSKEKGLSQAAIDASG-------------- 106
Query: 98 GPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGV 154
G+DIDTL V P+H RE DFF +L + + ++ PVPDA VP++K + G+
Sbjct: 107 --GSDIDTLVVAPKHVMRE-DFFAHFPAILEKHAPKDAIEKMTPVPDAFVPIIKIEIFGI 163
Query: 155 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 214
SIDL++ARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR L
Sbjct: 164 SIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLAL 223
Query: 215 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 274
R ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+ QW WP P
Sbjct: 224 RAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQP 283
Query: 275 VLLCAIEEGSLGLQVWDPRRNPK--------------------DKYHLMPIITPAYPCMN 314
VLL IE+G L ++VW+P+ + D++HLMPIITPAYP M
Sbjct: 284 VLLKHIEDGPLHMKVWNPKVGSQLCFFFIPRALADFSFQIYHGDRFHLMPIITPAYPSMC 343
Query: 315 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISA 373
+++NVS ST +++ E +RG ++ + + + W LF +FF A YK YL I+ ++
Sbjct: 344 ATHNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINSTS 401
Query: 374 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF------------------- 414
+ + W G VES+LR L ++R + ++ HP P F
Sbjct: 402 TSKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGFERVHICKTDEEVDAVKAGS 460
Query: 415 ----SDKSK---------PLYCSYFMGLQRKQGV-----PVGEGEQF------------- 443
+D +K P + + G+ P GE +
Sbjct: 461 MKYQADDTKTATTDETNDPTHIAAAENANENVGIAEAEKPTGENKYTLYTTTYYIGLELK 520
Query: 444 ----DIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSRP 492
DI FK + + +PG+ ++++HV +LP+ VF PG VRP+RP
Sbjct: 521 PLAPDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQPGEVRPTRP 575
>gi|170061473|ref|XP_001866247.1| poly a polymerase [Culex quinquefasciatus]
gi|167879711|gb|EDS43094.1| poly a polymerase [Culex quinquefasciatus]
Length = 554
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 162/391 (41%), Positives = 241/391 (61%), Gaps = 33/391 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
+G+T ISLA P +D +T +L+K L N++E + + R E+L +L+ +VK WV+ +
Sbjct: 179 MGMTSAISLAEPKKEDHTKTVELQKALEPYNVFEDESKLNHRMEILSKLNTLVKQWVRNV 238
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S +K + + L ++ KI+TFGSYRL V+ G +ID LCV PR+ R +D+FG ++L
Sbjct: 239 SISKNMPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCVAPRNIER-QDYFGSFFELLK 297
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+ PE V +A VPV+K KF G+ IDLL+ARL+L IP+ D+ +D +L+N D + V
Sbjct: 298 KQPEY---RAVEEALVPVVKMKFDGIKIDLLFARLALKEIPDKFDLREDMLLKNLDPKLV 354
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
RSLNGCR TD+ILR VP I NFR L + G+YSN G+ GG++WA+LVAR CQ
Sbjct: 355 RSLNGCRATDEILRPVPNIDNFRLAL--------QHGIYSNSLGYFGGVSWAMLVARTCQ 406
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
L N V + V + F V+++W+ +LG Q+WDPR N + ++HLM IITP
Sbjct: 407 LL-NVVAATQVHKCFLVFSRWKL----------RQNLGFQLWDPRVNVQGQFHLMSIITP 455
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP NS+++VS ST ++M++EF RG +I + + ++A WD L ++
Sbjct: 456 AYPQQNSTFHVSRSTRKVMLNEFNRGMQITDEIMLDKA--GWDKLIATLSYSTL------ 507
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIER 399
+++ N DD W G VES++R L +ER
Sbjct: 508 --VTSNNTDDHLEWCGLVESKIRYLIQNLER 536
>gi|224001714|ref|XP_002290529.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973951|gb|EED92281.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 367
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 161/368 (43%), Positives = 223/368 (60%), Gaps = 17/368 (4%)
Query: 42 ESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGA 101
ES E RE VL ++ +++ WVK ++ KGLN ++ A ++FT GSYRLGVH PGA
Sbjct: 2 ESTEGIQRRERVLVKMGNLMREWVKGVAVKKGLNRDAVEGAGGELFTSGSYRLGVHEPGA 61
Query: 102 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYA 161
DIDT+ V P TRE DFF L + + P+VT PV +A VP++ F + G++IDLL+A
Sbjct: 62 DIDTIAVAPNICTRE-DFFDSLAERIRRHPDVTNFVPVENAAVPILTFDWEGINIDLLFA 120
Query: 162 RLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP----KIQNFRTTLRCM 217
RL+ +P D DI D +L D T +SLNG RVT+ I LV + Q F T +R +
Sbjct: 121 RLNASSVPRDFDIDNDLVLSGVDSATEKSLNGPRVTNLIAALVSGTDERYQTFLTVVRLV 180
Query: 218 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL 277
R WAK RG+YSN G+ GG+N + VA + QLYPNA P+ L+ +FF V+ WRWPNPV+L
Sbjct: 181 RKWAKARGLYSNKMGYWGGVNINIAVALVLQLYPNACPASLLRKFFLVFKSWRWPNPVML 240
Query: 278 CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 337
+ LGL VW+ + + + P++TPAYP MNS+ +VS TL+I+ +EF RGH +
Sbjct: 241 TKPHDAELGLPVWNSFQ-AANMRQVAPMVTPAYPAMNSTLSVSRQTLQILHEEFCRGHNV 299
Query: 338 CEAMEKN-----------EADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 386
+ + K+ E+ W LFEP FF Y YL + I + D + W G+V
Sbjct: 300 VDKLYKDFQKGALDKDKIESGDIWKELFEPSDFFIGYPYYLSLCIVGPSQADAQAWAGFV 359
Query: 387 ESRLRQLT 394
ESRLR+L
Sbjct: 360 ESRLRKLV 367
>gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130 [Aureococcus anophagefferens]
Length = 449
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/440 (39%), Positives = 238/440 (54%), Gaps = 41/440 (9%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK- 67
LG+T PI+ P + D + L LR++ +YES R VL RL I W +
Sbjct: 13 LGVTPPINTDMPAEHDAAASEALVHTLRELGVYESDAGKAVRTGVLDRLRAIADAWCENE 72
Query: 68 -----ISRA-KGLNDQLLQEANA----KIFTFGSYRLGVHGPGADIDTLCVGPRHATREE 117
RA G + + A+A ++ TFGS RL VH P ADID + V PRH TR
Sbjct: 73 WALAIAERACDGADCERALAASAPPRCELRTFGSVRLDVHTPDADIDVVLVAPRHCTRRA 132
Query: 118 DFFGELHQMLTEMPEVTE--LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS 175
FF L L + + V DA+ PV+K + +DLL+A L+ +PE LD+
Sbjct: 133 -FFDTLVAALEGDAHIGAGGVMAVRDAYTPVVKLRVGATDVDLLFAPLACDELPEPLDVM 191
Query: 176 QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 235
D++L+ DE +RSLNG RV + +L LVP FR LR ++ WA+ +G+YSNV G LG
Sbjct: 192 DDAVLEGLDEAAIRSLNGARVAEMLLSLVPDPAVFRVALRAVKRWARCKGLYSNVLGLLG 251
Query: 236 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI---------EEGSLG 286
G+N A+L A +CQ YPNA PS +V RFFR++ W WPNPVL+ A E +
Sbjct: 252 GVNCAILAAFVCQRYPNAAPSTVVGRFFRIFDGWDWPNPVLIAAPGAPPSSAGDESVASR 311
Query: 287 LQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEK--- 343
W+PR NP+D+ HL PI+TPA+P MNSSYNV LR + DE +G E +EK
Sbjct: 312 YAAWNPRLNPRDRAHLAPIVTPAHPTMNSSYNVGAPQLRAIKDELSKGLETTRRVEKLAA 371
Query: 344 -----------NEADV--DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 390
AD+ W LF P FF +++Y+++D+SA + LR W W ESRL
Sbjct: 372 HWRADESPTGDRAADLRDAWRRLFAPSDFFARHRHYVQVDVSAADDAGLRKWNAWCESRL 431
Query: 391 RQLTLKIERHTYNMLQCHPH 410
R L + ++ Y ++ PH
Sbjct: 432 RNLVVALDTPGY--VRARPH 449
>gi|170059284|ref|XP_001865296.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167878124|gb|EDS41507.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 328
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 218/340 (64%), Gaps = 14/340 (4%)
Query: 78 LLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH 137
L ++ I+TFGSYRLGV+ A+ID LCV PR+ R+ D+FG ++L + PEVTE
Sbjct: 2 LAEKLGGMIYTFGSYRLGVNHKRANIDALCVAPRNIERQ-DYFGSFLELLKKQPEVTECR 60
Query: 138 PVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 197
V + VP +K G+ IDLL+ARL+L IP++ D+ +D +L+N D + VRSLN CR T
Sbjct: 61 AVEEVLVPDVKMNLDGIKIDLLFARLALKEIPDNFDLCEDMLLKNLDPKLVRSLNRCRAT 120
Query: 198 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 257
D+ILRLVP I NFR LR + WAK+ G+YSN G+ GG++WA+LVAR CQL PN V +
Sbjct: 121 DEILRLVPNIDNFRLALRSTKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQL-PNVVAAT 179
Query: 258 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 317
V +FF V+++W+W +PV L + +LG QVWDPR N + ++HLMPIITPAYP
Sbjct: 180 QVHKFFLVFSRWKWSHPVFLKRPDTVNLGFQVWDPRVNVQGRFHLMPIITPAYP------ 233
Query: 318 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENAD 377
ST ++M++EF RG +I + + +A WD LFE +FF Y+ + + +++ N D
Sbjct: 234 ---HSTRKVMLNEFSRGMQITDEIMLGKA--GWDKLFEAPSFFFKYRYIIVLLVTSNNTD 288
Query: 378 DLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
DL W VES++R L +ER + L H +P F +
Sbjct: 289 DLLEWCELVESKIRYLIQNLERILHINL-AHVNPKCFEQQ 327
>gi|378756776|gb|EHY66800.1| poly(A) polymerase [Nematocida sp. 1 ERTm2]
Length = 507
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 234/372 (62%), Gaps = 5/372 (1%)
Query: 29 RKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFT 88
+K+ +YL+ +E + E++ RE VLG L +V ++ I++ + + ++ +KIFT
Sbjct: 14 KKVVEYLQTKGFFEDENESIQRERVLGMLSNLVNKFIMDIAKRNEI--PIDSKSLSKIFT 71
Query: 89 FGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 148
FGSYRLGVH GADIDTLCV P +R E FF + L +TE+ V + VP++K
Sbjct: 72 FGSYRLGVHSSGADIDTLCVVPNFVSRNE-FFTVFYDELCSKSYITEISKVTNTFVPLIK 130
Query: 149 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 208
FK + IDL++AR+ L IP ++D+ + +L++ E+ + SLNG RVTD+IL VP I+
Sbjct: 131 FKIKSIPIDLVFARMDLPSIPPNIDLLNNKLLKHMSEKCILSLNGNRVTDEILAQVPNIE 190
Query: 209 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 268
F TLR M++WA++R VY + G++GG+ +AL VA++CQ+YP+A + +FF V+++
Sbjct: 191 TFHKTLRFMKYWAQKRQVYGHAYGYMGGVAYALCVAKVCQMYPSADAFKTIEKFFEVFSK 250
Query: 269 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 328
W WP PV++ + + + L+VW+P+ N K MP+ITP YP + S++N++TSTL +M
Sbjct: 251 WAWPQPVIIKEVPDCNYNLKVWNPKVNVHHKNDKMPVITPVYPPLCSTHNITTSTLFVMK 310
Query: 329 DEFQRGHEI-CEAME-KNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 386
EFQRG I E+++ K E D L E FF +K Y I ++ +N+ + + G+
Sbjct: 311 REFQRGTAIFAESLQNKTEPFKVLDELCEDTDFFTRHKTYFMIAMACDNSKEFGRFMGFA 370
Query: 387 ESRLRQLTLKIE 398
E+R+R K+E
Sbjct: 371 ETRVRMFAQKLE 382
>gi|224004590|ref|XP_002295946.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585978|gb|ACI64663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 532
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 187/539 (34%), Positives = 276/539 (51%), Gaps = 64/539 (11%)
Query: 50 REEVLGRLDQIVKIWVKKISRAK--GLND------QLLQEANAKIFTFGSYRLGVHGPGA 101
R+ VL L+ ++ W + AK LND ++ ++ + +FGSYRL VH P +
Sbjct: 4 RKRVLRDLEDMLCRWSDETFFAKNAALNDDDNTNRKVPPTSSPALLSFGSYRLSVHTPSS 63
Query: 102 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYA 161
DID L + P H TR+ DFF L V ELHPV A+ PV+KF+ GV IDL++A
Sbjct: 64 DIDCLVLAPPHLTRD-DFFTTWVTALQNEARVKELHPVSGAYTPVIKFEIEGVKIDLIFA 122
Query: 162 RLSLWVIPEDLDISQ-------DSILQNADEQTVRSLNGCRVTDQILRLV---------- 204
RL+ I ++ + D++L DE +VRS+NG RV +L +
Sbjct: 123 RLNEPTINNHDELDEIKEMELDDTLLIGLDETSVRSINGVRVAQYLLSTLETTDKNRKNY 182
Query: 205 ---PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 261
++ NFR TLR ++ WA+ G+YSNV GFLGG+NWA+LV +C+ YP+A S L+
Sbjct: 183 DSATQVDNFRLTLRAVKEWARVHGLYSNVLGFLGGVNWAILVCWVCKRYPDAPASTLLQI 242
Query: 262 FFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 317
FF+ ++ W+WP PVLL + EG L VWDP N +D HLMPIITP YP MNSSY
Sbjct: 243 FFKTFSTWKWPMPVLLSTQKQRPPEGVNNLPVWDPSSNFRDAKHLMPIITPCYPSMNSSY 302
Query: 318 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENAD 377
NV LR + DEF R ++C + W LFE FF+ + NYL++D A N D
Sbjct: 303 NVGEPQLRRLRDEFARASKLCSDVAFGTK--KWGVLFEWNEFFQQHANYLQVDTVATNED 360
Query: 378 DLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK----PLYCSYFMGLQRKQ 433
D R W G E+R+R L +E + ++ +P F + S+F+ L+
Sbjct: 361 DFRAWFGLCEARMRLLIAGLESPGFG-VRAYPFAKFFHRREDGGGGNYIASFFIALRFAN 419
Query: 434 GVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 493
V + D+ V +F ++ + R+P M + + V+R++LP+FVF
Sbjct: 420 KV-----WKVDLAPLVTDFLTVINSWDGREPTMDLMIRLVSRKDLPSFVF---------- 464
Query: 494 KGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGS 552
D+ + E KP + +D+V+ + +AT PS+ +GS
Sbjct: 465 ----DAEKREEHITKPVLKPNNQQSSANRTDEDDVENQV-----NATTPSAKKNELDGS 514
>gi|224099105|ref|XP_002311376.1| predicted protein [Populus trichocarpa]
gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 233/398 (58%), Gaps = 18/398 (4%)
Query: 40 LYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGP 99
L+ S EE R+ ++ +L IV W KK++ + L Q + +A I T+GSY LG H P
Sbjct: 6 LFPSPEEDEKRKIIVEKLKTIVVAWAKKVAWQRCLPKQQIAATSATILTYGSYGLGFHDP 65
Query: 100 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 159
+DID LCVGP AT EDFF LH +L PE++E+H V D+ VP+M+F F G+S+DL
Sbjct: 66 ESDIDALCVGPFFATIAEDFFIVLHNILKSRPEISEIHCVKDSKVPLMRFTFDGISVDLP 125
Query: 160 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 219
YA+L + +PE++DI S+L N DE + +SL+G R +IL LVP + NF++ LRC++
Sbjct: 126 YAQLKVLNVPENVDILNLSLLTNIDETSWKSLSGVRANQRILLLVPNLMNFQSMLRCLKL 185
Query: 220 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCA 279
WAKRRGVY N+ GFLGG++ A+L A +CQ PNA L+S FF Y W WP PV+L
Sbjct: 186 WAKRRGVYGNLNGFLGGVHLAVLAAFVCQNQPNASVIALISNFFSTYAMWPWPTPVML-- 243
Query: 280 IEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE 339
+ + V D + MPI P P NV+ ST + EF RGH +
Sbjct: 244 --QDGMSSNVED----VIETRFYMPIRLPCSPYEYCHSNVTKSTFTKIRAEFLRGHSMTR 297
Query: 340 AMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 399
+ K + D D +FEPF + Y +++I +SA + D+L +W GWV+S R L LK+E
Sbjct: 298 DLLKLKLDSDVGRIFEPFPYSTNYTRFVKIYLSAPDQDELGDWVGWVKSHFRCLLLKLE- 356
Query: 400 HTYNMLQ--CHPHPGDFS--DKSKPLYCSYFMGLQRKQ 433
+Q C P+P ++ D S+P ++ GL R +
Sbjct: 357 ----AVQGFCDPNPMEYVDMDASEP-NVVFYWGLNRSR 389
>gi|62202042|gb|AAH92668.1| Papolb protein [Danio rerio]
Length = 283
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/259 (54%), Positives = 185/259 (71%), Gaps = 1/259 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + DL+ TRKL + LR ++E + E R VLG+L+ +VK W++++S
Sbjct: 20 GITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVS 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
AK + ++ KIFTFGSYRLGVH GADID LCV PRH R DFF ++ L E
Sbjct: 80 EAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKE 138
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D + +R
Sbjct: 139 QEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIR 198
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 258
Query: 250 YPNAVPSMLVSRFFRVYTQ 268
YPNAV + LV +FF V+++
Sbjct: 259 YPNAVAATLVHKFFLVFSK 277
>gi|387594343|gb|EIJ89367.1| poly(A) polymerase [Nematocida parisii ERTm3]
gi|387596813|gb|EIJ94434.1| poly(A) polymerase [Nematocida parisii ERTm1]
Length = 506
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 263/458 (57%), Gaps = 23/458 (5%)
Query: 21 TDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQ 80
T+ + K+ +YL +E + E++ RE VLG+L +V ++ I++ + + +
Sbjct: 6 TETERTNDEKVVEYLHSKGFFEDESESIQRERVLGKLSNLVNKFIMDIAKRNQI--PIDK 63
Query: 81 EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVP 140
++ +KIFTFGSYRLGVH GADIDTLCV P +R E FF + L +TE+ V
Sbjct: 64 KSLSKIFTFGSYRLGVHSSGADIDTLCVVPNFVSRNE-FFTTFYDELCSKDYITEISKVT 122
Query: 141 DAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 200
+ VP++KFK + IDL++AR+ L I ++D+ + +L++ E+ + SLNG RVTD+I
Sbjct: 123 NTFVPLIKFKIKTIPIDLVFARVDLPSISPNIDLLNNKLLKHMSEKCILSLNGNRVTDEI 182
Query: 201 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS 260
L VP I F TLR +++WA++R VY + G++GG+ +AL VA++CQLYP A +
Sbjct: 183 LAQVPNISTFHKTLRFIKYWAQKRQVYGHSYGYMGGVAYALCVAKVCQLYPGADAFETIE 242
Query: 261 RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 320
+FF V+++W WP PV++ + + + L+VW+P+ NP+ K MP+ITP YP + S++N++
Sbjct: 243 KFFDVFSKWPWPQPVIIKEVPDCNYNLKVWNPKINPQHKNDKMPVITPVYPPLCSTHNIT 302
Query: 321 TSTLRIMMDEFQRGHEI-CEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDL 379
STL + EF RG I E +K + D L E FF +K Y I ++ +N +
Sbjct: 303 NSTLFVAKKEFLRGVAIFSENADKKDPMKILDQLCEDADFFTRHKTYFMIALACDNPKEF 362
Query: 380 RNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG-----DFSDKSKPL------------Y 422
+ G+ E+R+R K+E + N+ + P D + K+ PL +
Sbjct: 363 SRFMGFAETRVRMFAQKLE-NIENIEYAYTFPKKYILEDVTSKNVPLLKELKCGDDSYAF 421
Query: 423 CSYFMGLQRKQ-GVPVGEGEQFDIRLTVKEFKQAVSMY 459
++F+G+ +P+ ++ +++ V EFK ++ Y
Sbjct: 422 GAFFIGIDFSTVKLPLNASKKMNLKKPVLEFKSSLETY 459
>gi|395823522|ref|XP_003785035.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Otolemur garnettii]
Length = 735
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 179/480 (37%), Positives = 269/480 (56%), Gaps = 24/480 (5%)
Query: 14 PISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKG 73
P+S A P D R ++L + + + E +EE R + G+L+ +VK W++ ++ +K
Sbjct: 23 PVSSAAPQGTDCKRLQRLTETXKPSGVSEEEEELQCRILIWGKLNNLVKEWIRGLNESKK 82
Query: 74 LNDQLLQEANAKIFTFGS---YRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 130
L + + F + + L GAD D LC PRH DFF ++ L
Sbjct: 83 LPXPVTENVGRNFFLLVNQCHHLLSGLTKGADTDALCAVPRHVN-XRDFFTSFYEKLKLQ 141
Query: 131 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 190
EV +L V +A VPV+K F G ID+L+ARL+L IPEDLD+ DS+L+ D + +RS
Sbjct: 142 EEVKDLRAVEEAFVPVIKLCFDGTKIDILFARLALQTIPEDLDLXDDSLLKRLDIRCIRS 201
Query: 191 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 250
LNGC++T++IL LV + NFR TLRC++ WAK VYSN+ GF+ G++WA+L AR CQLY
Sbjct: 202 LNGCKITNEILHLVSNMDNFRLTLRCIKLWAKHHTVYSNILGFVTGVSWAMLGARTCQLY 261
Query: 251 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 310
P A+ S LV FF V+++W PNPVL+ E+ +L L VWD R NP D+Y PIITPAY
Sbjct: 262 PIAMASTLVHXFFLVFSKWEXPNPVLVKQPEKCNLNLPVWDSRVNPSDRYQFAPIITPAY 321
Query: 311 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 370
P NS+Y+ S ST ++++EF+ I + + + V+ LFE FF+ YK+Y+ +
Sbjct: 322 PQQNSTYSASISTQMVVVEEFKXSLSITDXL---LSKVEXSKLFEAPIFFQKYKDYIVLL 378
Query: 371 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS- 424
A W G VES++ L +E++ + L Q P P + DK + +C+
Sbjct: 379 AGAPTEKQRLEWVGLVESKIXILIGSLEKNEFITLAHVNPQAFPAPKENPDKKE--FCTV 436
Query: 425 YFMGLQRKQG---VPVGEGEQFDIR-LTVKEFKQA--VSMYTLRKPGMQISVAHVTRRNL 478
+ +GL K+ + DI+ T ++QA M+ + M+I+ HV R+ L
Sbjct: 437 WVIGLVFKKTENYKNLSVNLXHDIQAFTDTVYRQARNSKMFEV---DMRIAATHVKRKQL 493
>gi|397635329|gb|EJK71816.1| hypothetical protein THAOC_06705 [Thalassiosira oceanica]
Length = 629
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/526 (34%), Positives = 276/526 (52%), Gaps = 61/526 (11%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDV----NLYESQEEAVSREEVLGRLDQI 60
+R+ P P D++ +L L DV NL ES++ R++ + +L ++
Sbjct: 69 QARRVAKARPPPNISPEDEE-----RLSSSLLDVCTARNLIESEDGTARRKKAMRKLQRM 123
Query: 61 VKIW----VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRE 116
++ W VK K E + +FGSYRLGVH P AD+D L + PRHATR+
Sbjct: 124 LQDWSGSLVKGKKAKKARAKAAGAETPPILLSFGSYRLGVHTPDADVDCLVLAPRHATRD 183
Query: 117 EDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS--LWV------- 167
DFFG ++L + V +LHPV A+ PV+KF GV IDL++A +S +W+
Sbjct: 184 -DFFGSWVRILKQKKGVEDLHPVSSAYTPVIKFVMDGVKIDLIFASISNEVWLREHAQCV 242
Query: 168 -----------IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP---KIQNFRTT 213
++D+ DS+L DE +VRS+NG RV +L + +++N+R T
Sbjct: 243 KSGDGGAEDGGSEREVDV-DDSLLVGLDEASVRSVNGVRVAQYLLSTMSSPRQLENYRLT 301
Query: 214 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN 273
LR ++ WA+ +G+YSNV G+LGG+NWA+LV +C +P+A + L+ FF + W WP+
Sbjct: 302 LRAVKEWARVQGMYSNVLGYLGGVNWAILVCFVCIRHPDASSARLLHLFFETFANWNWPD 361
Query: 274 PVLLCAIEEGSL------GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 327
PV+L + VWDPR N +DK H+MPIITP YP MNSS+NV LR M
Sbjct: 362 PVMLTPEASRHVPPRNVDARPVWDPRENYRDKLHVMPIITPCYPSMNSSFNVGEPGLRRM 421
Query: 328 MDEFQRGHEICEAMEKNEADVD-----WDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 382
DEF+R + + A + W +LFE FF + YLR+D++A D+ W
Sbjct: 422 RDEFRRAARVSREILSGTATGEDGKKGWSSLFERSGFFGQHGAYLRVDVAATTEDEFLRW 481
Query: 383 KGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC-SYFMGLQRKQGV--PVGE 439
G E+R+R L +E + ++ +P + +K Y S+F+ L+ GV V
Sbjct: 482 FGLCEARMRLLIAGLE---SDEIRAYPFARFYRRDTKEEYVSSFFVALRFASGVDRDVRW 538
Query: 440 GEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 485
GE+ V E+ V+ + R GM + + + R +LP FVF G
Sbjct: 539 GER------VSEYLHVVNSFEGRTAGMDLRLELLKRADLPRFVFDG 578
>gi|294948940|ref|XP_002785971.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900079|gb|EER17767.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 505
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 241/412 (58%), Gaps = 22/412 (5%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T P+S PT D T +L ++ + ES + R EVL ++++V W+ +S
Sbjct: 36 GVTPPVSENYPTRADYEATEELRHFIENRAPPESSHGMLKRYEVLVEIERMVNKWIYDVS 95
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ ++ A++ TFGS+RLGV P +DIDTL + P +R++ F + ML
Sbjct: 96 AGE-------IQSKARVLTFGSFRLGVITPMSDIDTLVLLPNSISRDDFFTDFVETMLNR 148
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
P VTE +PVP AHVP++K K+ G+ +D+L A + V+ D+D Q+ ++ + +++ ++
Sbjct: 149 SPHVTECNPVPAAHVPIIKVKYRGICMDILAACVPTHVLSGDVDSVQEELIYDVEKRCMK 208
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
S+NG RV D++L LV Q FR R +++WA++R +YSN G++GG++WA++V R+CQL
Sbjct: 209 SMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGRVCQL 268
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPN +V RFF VY +W+W + G+ + + RR D++H+MP+ITP
Sbjct: 269 YPNYSAKQIVERFFFVYARWQW-----TATRDYGNSNVPL---RRYTSDRHHVMPVITPI 320
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEA-------DVDWDTLFEPFTFFEA 362
+P N++YNV S R+++ E +RG EI E M N++ +V W L PF FF+
Sbjct: 321 FPTHNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQV 380
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
Y+ +L ++ISAE +KG VESR+R L +E + + PHP F
Sbjct: 381 YRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVLPQPHPVMF 432
>gi|123495483|ref|XP_001326753.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909672|gb|EAY14530.1| hypothetical protein TVAG_388620 [Trichomonas vaginalis G3]
Length = 494
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/480 (33%), Positives = 262/480 (54%), Gaps = 11/480 (2%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAK 72
+P + GPT +L + +L++++ + ++E+ R+EVL ++ ++ +V+ I++
Sbjct: 10 KPQTEEGPTGAELQASIELQRFIDKYDAPATEEQKTKRQEVLSKIKILINEFVRIIAKKT 69
Query: 73 GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 132
G + L+ +++ +GSYRLGV G+DID + V P R DFF ++M+ P
Sbjct: 70 GNTAEGLENVESQLVPYGSYRLGVVSEGSDIDCIVVAPSFVKRS-DFFNTFYEMMINHPS 128
Query: 133 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 192
V EL V +A+ P+M F + G+ IDL +A L++ + ED D + D IL N DE++VRSLN
Sbjct: 129 VKELVKVENAYSPIMSFHYDGIEIDLSFASLAMTTVAEDTDFADDHILDNVDEESVRSLN 188
Query: 193 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 252
G RV D +L+LVP FR LR +R WAK+R VY NV G+LGG+N A+L A ICQ YP
Sbjct: 189 GRRVNDMLLQLVPNQDIFRVVLRFLRIWAKKRCVYGNVFGYLGGVNLAILAAFICQRYPK 248
Query: 253 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 312
P+ ++ FF W WP P+ + G+ WDP R +D MPIITPAYP
Sbjct: 249 KSPAYIIVMFFNDLATWTWPEPIYINTPTTGNRS--NWDPTRQ-QDHKDCMPIITPAYPT 305
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 372
+NS ++ + S+ M EF+RG ++ A K+EA W+ + + FF ++ ++ + +
Sbjct: 306 INSLHSATKSSRNRMTVEFKRGFKVASACLKSEA--SWERIIDSPKFFVRHRKFVEVLVV 363
Query: 373 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK--PLYCS-YFMGL 429
A + +V+SR+R L + IE ++ + P +F +CS +++GL
Sbjct: 364 ATEEKVYTEFMKFVQSRVRFLAINIETQLRHVSHAYIWPVEFPANGYRGNEFCSVFYIGL 423
Query: 430 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 489
VP E + + LT K + P + + V ++LP+F+FP G RP
Sbjct: 424 SYH--VPKDENQSRTLDLTSPAKKWVDDIRQKAPPNADVILDVVDTKDLPSFLFPNGERP 481
>gi|294948934|ref|XP_002785968.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900076|gb|EER17764.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 436
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 231/396 (58%), Gaps = 22/396 (5%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T P+S PT D T +L ++ + ES + R EVL ++++V W+ +S
Sbjct: 36 GVTPPVSENYPTRADYEATEELRHFIENRAPPESSHGMLKRYEVLVEIERMVNKWIYDVS 95
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ ++ A++ TFGS+RLGV P +DIDTL + P +R++ F + ML
Sbjct: 96 AGE-------IQSKARVLTFGSFRLGVITPMSDIDTLVLLPNSISRDDFFTDFVETMLNR 148
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
P VTE +PVP AHVP++K K+ G+ +D+L A + V+ D+D Q+ ++ + +++ ++
Sbjct: 149 SPHVTECNPVPAAHVPIIKVKYRGICMDILAACVPTHVLSGDVDSVQEELIYDVEKRCMK 208
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
S+NG RV D++L LV Q FR R +++WA++R +YSN G++GG++WA++V R+CQL
Sbjct: 209 SMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGRVCQL 268
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPN +V RFF VY +W+W G RR D++H+MP+ITP
Sbjct: 269 YPNYSAKQIVERFFFVYARWQW--------TATRDYGNSNAPRRRYTSDRHHVMPVITPI 320
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEA-------DVDWDTLFEPFTFFEA 362
+P N++YNV S R+++ E +RG EI E M N++ +V W L PF FF+
Sbjct: 321 FPTHNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQV 380
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 398
Y+ +L ++ISAE +KG VESR+R L +E
Sbjct: 381 YRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLE 416
>gi|298710751|emb|CBJ32172.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 533
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 215/383 (56%), Gaps = 30/383 (7%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAK 72
EPI+ + P+ DL KLE ++RD + + RE+VLG++ + WV +
Sbjct: 30 EPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRAMFLQWVIDSALEA 89
Query: 73 GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 132
G++++ + A KI+T GSYRL +H P +DID +CV P+ T E FF L + L P
Sbjct: 90 GMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSEL-FFTTLKERLIAHPL 148
Query: 133 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 192
V ++ + A VP+++ F + IDL A L + +P LDI D
Sbjct: 149 VANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQ-------------- 194
Query: 193 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 252
VP +F +RC+R WAK RG+YSN G+LGG+N+ ++VA CQ+YPN
Sbjct: 195 -----------VPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPN 243
Query: 253 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 312
A PS L+ RFF++ W WPN + L + LGL+VW+ R N +H MPIITPAYP
Sbjct: 244 AGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARAN---SWHCMPIITPAYPV 300
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD-WDTLFEPFTFFEAYKNYLRIDI 371
MNSS NVS TL +M EF RG E+ + K + + + LFEP FF Y +YL +D+
Sbjct: 301 MNSSANVSRFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDM 360
Query: 372 SAENADDLRNWKGWVESRLRQLT 394
A + D+ R W GWVESRLR++T
Sbjct: 361 MASSEDEHRAWVGWVESRLRKVT 383
>gi|123480837|ref|XP_001323419.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121906284|gb|EAY11196.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 508
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 264/481 (54%), Gaps = 12/481 (2%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
+ + +P+S A PT D+ +RKL ++L E R+ V + +IV +++K+
Sbjct: 15 IPLYKPVSEAEPTPIDIEASRKLVEFLDSAGAIADAEAMKHRQAVFETVSKIVDQFIEKV 74
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
K + + K+F GSY+LGV P +DID + + P+ +EE FF +++L
Sbjct: 75 RVNKKMEPPEGEVYKGKLFYSGSYKLGVCSPKSDIDCVILAPQFVQKEE-FFSIFYELLA 133
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+V L V +A+VP++K + + D+ +A L L I +D+D+S DS+L+N + +V
Sbjct: 134 ADTKVKGLIKVEEAYVPIIKLTYDDIEFDISFAALGLNNITDDIDLSPDSVLENLSKLSV 193
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
R+LN RV + +++LVP + NF+T L+ +R+WA +RG+Y NV G+ GG+N A+L A +CQ
Sbjct: 194 RALNSLRVNNMVIKLVPNLDNFKTLLKFVRYWAFKRGLYGNVYGYFGGVNLAILSAFVCQ 253
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
YP A P+ML FF +QW WP P+ + G L WDP D +MPIITP
Sbjct: 254 RYPTASPAMLALYFFSEISQWTWPTPIYINRPNYGE--LLSWDPTTE-SDHNDVMPIITP 310
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
AYP NS + +TS+ ++ E + +I + D+ W + E FFE+YKNY+
Sbjct: 311 AYPSTNSQRSATTSSRNRIIQEMVKALQIMPNIIT--GDLPWSAVCEDHEFFESYKNYIE 368
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP-HPGDFSDKSKPLY-CSYF 426
IDI AE D WKG V S++++L +E ++C P P F ++ Y S F
Sbjct: 369 IDIRAEGLADYNWWKGTVISKVKRLITSLE--AIERVKCAPIFPSSFDRENNNKYQGSIF 426
Query: 427 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT-RRNLPNFVFPG 485
+GL+ ++ EG++ + +K++ + + T R +I V R+ +P+F FP
Sbjct: 427 IGLETEK-TKDDEGKKVNPSAAIKKYLEEIYKLTNRPLSTKIENPQVINRKKIPDFCFPN 485
Query: 486 G 486
G
Sbjct: 486 G 486
>gi|348667211|gb|EGZ07037.1| hypothetical protein PHYSODRAFT_307061 [Phytophthora sojae]
Length = 1061
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 268/519 (51%), Gaps = 77/519 (14%)
Query: 34 YLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYR 93
Y+ D++ + E + + +VL +L ++ WVK + R + L+++ + +F GSYR
Sbjct: 473 YVDDISPMDVPEARMHKLQVLKQLSDLLTKWVKMVGRERELSEEHIALTKGSLFLAGSYR 532
Query: 94 LGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSG 153
LG+ P +DID +CV P H T +DFF +L + P V+ L PVP+A+VP++ F G
Sbjct: 533 LGLDDPNSDIDAVCVAPWHVT-HDDFFSSFCHLLEQTPGVSHLAPVPNAYVPLISLSFLG 591
Query: 154 VSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 213
V +DLL+ARL + + + +I D +L E ++++LN RV+ +L LVP+ + +R
Sbjct: 592 VRMDLLFARLPVSSVEPNQNIDSDHMLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIV 651
Query: 214 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN 273
LR +R WA+RRG+YS G+LGGI+WA+LVA +CQLYPNA P+ + RFF+V ++W+WP
Sbjct: 652 LRAVRAWARRRGIYSAKLGYLGGISWAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQ 711
Query: 274 PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 333
PV+L I + LG +WDPR++ D+ H+MPIITPAYP MNSS VS T ++ +E R
Sbjct: 712 PVMLNMIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPHMNSSVQVSQPTFSVIYEELWR 771
Query: 334 GHEICE--------------AMEKNEADVD------------------------------ 349
+ E + E +EAD+
Sbjct: 772 ARYLAEIAVGISKPFPTAAPSPESSEADLKAAVVCMATSMPSFDQPLNAVDSTEGVVQTT 831
Query: 350 --------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT 401
WD LF+P FF Y +Y+ + A + + W +V+SRLR+L + H
Sbjct: 832 QGFGEGSAWDKLFQPSNFFIRYSSYMVFNFQAASESAMHKWGKFVQSRLRKLVDNLH-HM 890
Query: 402 YNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQ----RKQGVPVGEGEQFDIRLTVKEF 452
+ + H P F +++ P C F+G++ R Q + + + K
Sbjct: 891 SPVSRVHAFPRYFPHTCDAERRGPGSC-MFIGIEFHYRRHQTIQPKDDPEVK-----KTL 944
Query: 453 KQAVSMYTL--------RKPGMQISVAHVTRRNLPNFVF 483
+QA+ + ++P M ++ LP FVF
Sbjct: 945 EQAIRFFLATDLQQMEDKQPDMTADAKVLSWEELPEFVF 983
>gi|326437024|gb|EGD82594.1| hypothetical protein PTSG_03248 [Salpingoeca sp. ATCC 50818]
Length = 840
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 183/509 (35%), Positives = 260/509 (51%), Gaps = 40/509 (7%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAK 72
EP+S P+ + LM TRKLE L+ + ES E R VL L+ VK W+ K S
Sbjct: 4 EPLSTEHPSLEQLMSTRKLETCLKKEGIMESTEGYEQRNRVLANLNAFVKDWLYKYSLEH 63
Query: 73 GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 132
G + + Q AKIFTFGS+RLGVH DID L P+ TR FF + L + +
Sbjct: 64 GKSPEAAQLIRAKIFTFGSFRLGVHSKNGDIDALICFPQSVTRAA-FFSSFYDALAQRDD 122
Query: 133 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 192
V +LH A VP +K F GV +DLL A+L I LD+S D IL+N E VRS+N
Sbjct: 123 VEDLHSAESAAVPAIKLTFGGVEMDLLMAQLPADSIAPSLDLSDDDILRNLPETCVRSIN 182
Query: 193 GCRVTDQILRLVPKI-QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 251
G RVTD+IL L P ++F LR ++ WAKRRG+Y N ++GG++ A+LVA+ICQL+P
Sbjct: 183 GRRVTDKILELCPAAREDFGLCLRTIKLWAKRRGIYGNALCYVGGVHLAILVAKICQLFP 242
Query: 252 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLMPIITPAY 310
A S LV +FF Y +W W PV L +E+ G + W P N D +M I+TP Y
Sbjct: 243 YATASTLVEKFFWHYKRWDWAIPVELQHVEDLGITHIPHWSPINNYHD-MSVMKILTPVY 301
Query: 311 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 370
P N+SY V+ STL + E R + + + +A W L++ FF Y +Y+ +
Sbjct: 302 PSQNASYTVTRSTLYRIKRELDRAESVVQKIADGKA--TWPRLWKQIPFFGVYSHYICVQ 359
Query: 371 ISAENADDLRNWKGWVESRLRQLTLKIERH---TYNMLQCHPHPGDF------------- 414
+ D ++G VES +R L +E H TY + P P F
Sbjct: 360 ALTNSEQDRTLYEGLVESTVRNLVTSLEFHPAVTYAI----PIPKAFRRSPEKDPSTLED 415
Query: 415 --SDKSKPLYC---SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPG 465
+ + P YC +F+GL EQ DI + +F++ V S T P
Sbjct: 416 EDTHERPPEYCWRTLWFIGLVFDPKA----TEQLDILTVMSDFERRVRFKESRMTRYDPS 471
Query: 466 MQISVAHVTRRNLPNFVFPGGVRPSRPSK 494
M+ +V + R +P ++ + ++P+K
Sbjct: 472 MRYTVDPMARDEIPTWLH-AEAKVAKPAK 499
>gi|349602954|gb|AEP98933.1| Poly(A) polymerase alpha-like protein, partial [Equus caballus]
Length = 279
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 140/260 (53%), Positives = 185/260 (71%), Gaps = 1/260 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQW 269
YPNA+ S LV +FF V+++W
Sbjct: 260 YPNAIASTLVHKFFLVFSKW 279
>gi|449682525|ref|XP_002165152.2| PREDICTED: poly(A) polymerase gamma-like, partial [Hydra
magnipapillata]
Length = 351
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/337 (44%), Positives = 218/337 (64%), Gaps = 16/337 (4%)
Query: 156 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 215
IDLL+ARL+L IPEDLD+ +++L+N D + VRSLNGCRVTD+IL LVP I NFR TLR
Sbjct: 1 IDLLFARLALTTIPEDLDLLDENLLKNLDARCVRSLNGCRVTDEILHLVPNIANFRMTLR 60
Query: 216 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 275
++ WAK + VYSNV GFLGG++WA+LVARICQLYPNA+ + LV +FF +Y++W WP PV
Sbjct: 61 AIKLWAKNQFVYSNVLGFLGGVSWAMLVARICQLYPNAIAATLVQKFFLIYSKWAWPQPV 120
Query: 276 LLCAI-EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 334
LL + E L +WDPR NP D++HLMPIITPAYP NS++NVS S+ +M D F+RG
Sbjct: 121 LLKQMPTENKLNFPIWDPRMNPADRFHLMPIITPAYPQQNSTFNVSMSSRTVMQDAFKRG 180
Query: 335 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLT 394
++ E + + W LF P FF+ YK+Y+ + + +++ W+G VES++R L
Sbjct: 181 FQVMEEIYSKTS--TWKALFAPANFFQKYKHYIVLSAYSNSSEHHLEWEGLVESKIRILI 238
Query: 395 LKIERHTYNMLQCHPHPGDFSDKSKP---LYCSYFMGLQRKQGVPVG-EGEQFDIRLTVK 450
+ +ER+ + L H +P + K +F+GL+ ++ P G + + DI ++
Sbjct: 239 VNLERNQFVKL-AHVNPKSYDPILKSESGTVSRWFIGLEFQK--PEGTKNVKVDITAEIQ 295
Query: 451 EF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFV 482
F KQA + R+ GM+ HV ++ L N++
Sbjct: 296 YFTSTVHKQACQIAIFRE-GMRTEARHVKKKQLSNYL 331
>gi|1377870|gb|AAC52608.1| poly(A) polymerase VI [Mus musculus]
gi|149044214|gb|EDL97596.1| poly (A) polymerase alpha (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 293
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/260 (53%), Positives = 185/260 (71%), Gaps = 1/260 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQW 269
YPNA+ S LV +FF V+++W
Sbjct: 260 YPNAIASTLVHKFFLVFSKW 279
>gi|354681991|ref|NP_001238935.1| poly(A) polymerase alpha isoform 2 [Homo sapiens]
gi|441666293|ref|XP_004091880.1| PREDICTED: poly(A) polymerase alpha-like [Nomascus leucogenys]
gi|12654217|gb|AAH00927.1| PAPOLA protein [Homo sapiens]
gi|28375483|emb|CAD66560.1| unnamed protein product [Homo sapiens]
gi|119602051|gb|EAW81645.1| poly(A) polymerase alpha, isoform CRA_c [Homo sapiens]
Length = 285
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/260 (53%), Positives = 185/260 (71%), Gaps = 1/260 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 250 YPNAVPSMLVSRFFRVYTQW 269
YPNA+ S LV +FF V+++W
Sbjct: 260 YPNAIASTLVHKFFLVFSKW 279
>gi|345490104|ref|XP_003426299.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Nasonia vitripennis]
Length = 383
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 226/383 (59%), Gaps = 17/383 (4%)
Query: 124 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
H++L EV +L + +A V V+K F G+ ID+L+A L +P+ +D + D +L+
Sbjct: 4 HELLKSQKEVKDLRAIEEAFVXVIKMNFDGIEIDMLFAHLQGTKLPDPMDFTDDMLLKYL 63
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFR-TTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
D++ VRSLNGCRVT +IL+ V ++NFR TTL+ ++ AK G+YSNV G+LG ++WA+L
Sbjct: 64 DQKCVRSLNGCRVTKEILQSVSNLENFRLTTLKAIKLRAKNNGIYSNVLGYLGVVSWAIL 123
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK--Y 300
VAR CQLYPNA P+ L+ +FF +++ W WP PVLL ++++ +LGLQVWDPR N D+ Y
Sbjct: 124 VARTCQLYPNAAPATLIEKFFLIFSIWEWPRPVLLKSVKKVNLGLQVWDPRVNASDRPPY 183
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP NS++NV+ ST IM + + I + + +A WD LFEP FF
Sbjct: 184 HLMPIITPAYPQQNSTFNVTISTRTIMEEAIKTVLAITKDIAMGKA--SWDKLFEPSNFF 241
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 420
+ K+++ + S+ W G++ES++R L +R+ N+ H +P F P
Sbjct: 242 DEXKHFVILSASSLTNKMSIEWSGFIESKIRHLIGSFDRNP-NITFAHINPKSFP----P 296
Query: 421 LY-------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHV 473
L C + +GL ++ + DI+ +K + V L K GM +V
Sbjct: 297 LKPEEDEHGCMWLIGLTFRKAEKLSIDLTSDIKSFIKTTEGQVKKSNLFKDGMSQEAKYV 356
Query: 474 TRRNLPNFVFPGGVRPSRPSKGT 496
R+NL N++ ++ R + +
Sbjct: 357 RRKNLSNYIAANQIKRGRKTSSS 379
>gi|325191928|emb|CCA26398.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 664
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 170/491 (34%), Positives = 252/491 (51%), Gaps = 29/491 (5%)
Query: 11 ITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISR 70
+ +P+ L +D D+ T L +Y + + R + L ++V +W
Sbjct: 156 VVQPLYLGPTSDFDVQNTHSLLRYFHSIAKLPRSSDLSHRHLAIEELQRVVDLW------ 209
Query: 71 AKGLNDQLLQEANAKIFTF--GSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
L + + ++KI F GS+ L +D+D + P T + F +L+ L+
Sbjct: 210 ---LVQKFPEYPDSKIALFLGGSWHLKAGFSDSDLDIVAFAPNFVTLD-CFLTDLYVYLS 265
Query: 129 EMP--EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
+P ++T+L + A VP++ FK +GV ID L AR + +P L I D IL D
Sbjct: 266 NLPNSKITKLVAMKKATVPILAFKLNGVHIDFLLARSTELKVPTHLPICCDEILSGMDSI 325
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
++RS++ RV+ +L LVPK FR+ +R +R WAKRRG+YSN GFLGGI+W LL I
Sbjct: 326 SIRSMSIARVSSLVLELVPKGCAFRSFVRIIRLWAKRRGIYSNKTGFLGGISWTLLAVFI 385
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSL---GLQVWDPRRNPKDKYHLM 303
CQ+ P A S+L+ RFF V+++W WP PV + G+ G+Q W P+ N D+ HLM
Sbjct: 386 CQMLPEASLSVLLHRFFLVFSKWTWPTPVWIARPYLGNAEADGVQ-WCPQTNHHDRAHLM 444
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PIITP YP +NS+ NV+ +TLRIM +EFQRG I E + + A +W LF P F Y
Sbjct: 445 PIITPGYPSVNSAVNVNRATLRIMQEEFQRGRYIVEEITEKYAFGNWQNLFTPSEFLVRY 504
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 423
NYL + + A N +DL W ++ SRLR+L +E + HP+P P
Sbjct: 505 DNYLVMRVQALNEEDLDQWSNYIASRLRKLVESLEV-AIPIRSVHPYPVLMPGTQDPGVN 563
Query: 424 S---YFMGLQ---RKQGVP----VGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHV 473
+ Y +G + RK+G E + + V T RKPGM+I + +
Sbjct: 564 ASGYYLLGFEVENRKRGCKSNTLCEEAKACTVSAMRYFIATEVDQCTERKPGMKIDLQYA 623
Query: 474 TRRNLPNFVFP 484
LP V P
Sbjct: 624 NWNALPLCVLP 634
>gi|297829196|ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 172/496 (34%), Positives = 264/496 (53%), Gaps = 27/496 (5%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFG 90
L + + + L S E+ R V+ +L +IV WVK ++ L + NA I +G
Sbjct: 23 LRQLMVNEGLIPSLEDQEKRRVVINKLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYG 82
Query: 91 SYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFK 150
SY LGV+G +DID LC+GP A+ EDFF L ML EV+E+H V DA VP+++FK
Sbjct: 83 SYGLGVYGSESDIDALCIGPFFASISEDFFISLRDMLKSRREVSEVHCVKDAKVPLIRFK 142
Query: 151 FSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNF 210
F G+ +DL YA+L + IP ++D+ L++ DE + +SL+G R IL+LVP ++ F
Sbjct: 143 FDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELF 202
Query: 211 RTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR 270
++ LRC++ WAKRRGVY N+ GFLGG++ A+L A +C NA S L++ FF ++ W+
Sbjct: 203 QSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYESNATLSSLLANFFYIFAHWQ 262
Query: 271 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 330
WP PV+L + G P LMPI P + N++ ST +M E
Sbjct: 263 WPTPVVLLEDTYPATGA--------PPG---LMPIQLPCGSHQYCNSNITRSTFYKIMAE 311
Query: 331 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 390
F RGH + + K + W LFE + + Y + +I +SA N +DL +W GWV+SR
Sbjct: 312 FLRGHNLTKDYLK--PNFSWKNLFELYPYENTYTWFTKIHLSAANQEDLSDWVGWVKSRF 369
Query: 391 RQLTLKIERHTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV 449
R L KIE Y + C P+P ++ + +K ++ GLQ + + V DI
Sbjct: 370 RCLLSKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT-INVS-----DIESVE 420
Query: 450 KEFKQAVSMYTLRKPGMQISVAHVTRRNLP-NFVFPGGVRPSRPSKGTW---DSRRALER 505
EF + ++ + + P +I ++ V LP N R + +K W ++++
Sbjct: 421 TEFLKNLNSGSFQGPVGRIQLSVVKESQLPKNGECASNNRSKKVTKTCWRIRENKQCNNV 480
Query: 506 KVSSHTKPGADDGRKR 521
V SH PG G ++
Sbjct: 481 PVYSHHLPGYVVGYQK 496
>gi|301092990|ref|XP_002997344.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262110742|gb|EEY68794.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 677
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 40/515 (7%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
+ I P L PT+ DL T L K + + + E+ ++ + L ++V IW+++
Sbjct: 139 MPIVVPAELVPPTEYDLRSTNGLTKCVNAIAPMPTAEQMSAKHLAINELQRVVDIWLRRT 198
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ + A + GS+ L V +D+D + P H E FF L + L
Sbjct: 199 LDKLATDSETKSTETATLLLGGSWHLKVGNAESDLDVVAFMP-HTVTAEIFFSSLCEHLG 257
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLW-VIPEDLDI---SQDSILQNAD 184
+ V++L A VPV+ F+ + V IDLL+AR + +P+ L +++ D
Sbjct: 258 QESSVSDLVARRKAAVPVLSFQLNSVRIDLLFARYAQQQAVPKHLPFLPGDDMQVMRGMD 317
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
+VRSL+ RV IL LVP +R+ LR +R WA+RRG+YSN AGFLGGI+WA+LV
Sbjct: 318 ATSVRSLSVARVASLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGGISWAILVC 377
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHL 302
+CQ++P A + LV RFF V WRWP P+L+ G Q WDP+ N D+ HL
Sbjct: 378 FVCQMFPRASVASLVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQWDPQHNIHDRAHL 437
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD--VDWDTLFEPFTFF 360
MPIITP +P +N++ NV+ STLR++ +EF RG I + + + W+ LF P
Sbjct: 438 MPIITPGFPAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVL 497
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP------GDF 414
Y +++ I++ A N + L W +V SR R+L ++ HT ++ HP P G
Sbjct: 498 VRYDHHVAIELRAPNEEALAEWSSFVASRTRKLVETLQ-HTPSISALHPLPDLVRAQGHE 556
Query: 415 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKE-----------FKQAVSMYTL-- 461
+D+S + +F+G P + + D R + + K +V+ T
Sbjct: 557 TDESDAVVGYFFIGYTVNVP-PTPQPRRGDRRHSARSPVITKNSQEELAKNSVASATRYF 615
Query: 462 ----------RKPGMQISVAHVTRRNLPNFVFPGG 486
+KPGMQ+ + + + +LP+ +FPGG
Sbjct: 616 LATELNTAAEKKPGMQVDINYRSWNDLPSAIFPGG 650
>gi|428168831|gb|EKX37771.1| hypothetical protein GUITHDRAFT_158559 [Guillardia theta CCMP2712]
Length = 338
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 201/326 (61%), Gaps = 7/326 (2%)
Query: 39 NLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQE-ANAKIFTFGSYRLGVH 97
NL S+ E+ R L +L+++ + +VK++ L +Q +E ++ TFGSYRL VH
Sbjct: 5 NLLPSESESARRVRTLAKLNEMCRDFVKRVYEKNNLMEQYSEENPPYQLRTFGSYRLDVH 64
Query: 98 GPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSID 157
PGAD+DT+ + RH R+ D F +L+ + ++T L V +A VPV+KF+ D
Sbjct: 65 LPGADMDTVMIVTRHIHRD-DMFNDLYVAMQARKDITNLIKVQEARVPVIKFQMDEFEFD 123
Query: 158 LLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCM 217
L ARLS IPED D++ D L+N D+Q+V SLNG RVTD I LVP ++ + +R +
Sbjct: 124 LAMARLSYATIPEDFDVTDDKHLKNVDQQSVTSLNGVRVTDTIRSLVPTMKTLKYCIRAL 183
Query: 218 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL 277
+ WAK+RGVY NV GFLGGI+ ++ ARI QLYP A+PS L+ FF Y+QW+WP PV L
Sbjct: 184 KLWAKKRGVYKNVLGFLGGISLEIMAARIGQLYPKALPSRLLYFFFFTYSQWKWPQPVGL 243
Query: 278 CAIEEGS--LGLQVWD-PRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 334
+ S L L VW D+ HLMPIITP YP N++ NVS STL++M +EF R
Sbjct: 244 TEVIANSHDLNLPVWGFGATEMSDRRHLMPIITPCYPAQNATANVSKSTLKVMQEEFTRA 303
Query: 335 HEICEAMEKNEADVDWDTLFEPFTFF 360
+IC+ + E + +W LFEP F
Sbjct: 304 KDICKQIL--EGNAEWSDLFEPLDPF 327
>gi|444722668|gb|ELW63351.1| Poly(A) polymerase gamma [Tupaia chinensis]
Length = 554
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 167/216 (77%), Gaps = 1/216 (0%)
Query: 119 FFGELHQMLTE-MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
G+L+ ++ E + +V+E V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ D
Sbjct: 63 VLGKLNNLVKEWISDVSESKAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDD 122
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
S L++ D + +RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG+
Sbjct: 123 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 182
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP
Sbjct: 183 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 242
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 333
D+YHLMPIITPAYP NS+YNVSTST +M++EF++
Sbjct: 243 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQ 278
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 67 KISRAKGLNDQLL 79
+S +K + D +
Sbjct: 77 DVSESKAVEDAFV 89
>gi|301111045|ref|XP_002904602.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
gi|262095919|gb|EEY53971.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
Length = 677
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 264/517 (51%), Gaps = 44/517 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
+ I P L PT+ DL T L K + + + E+ ++ + L ++V IW+++
Sbjct: 139 MPIVVPAELVPPTEYDLRSTNGLTKCVNAIAPMPTAEQMSAKHLAINELQRVVDIWLRRT 198
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ + A + GS+ L V +D+D + P H E FF L + L
Sbjct: 199 LDKLATDSETKSTETATLLLGGSWHLKVGNAESDLDVVAFMP-HTVTAEIFFSSLCEHLG 257
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLW-VIPEDLDI---SQDSILQNAD 184
+ V++L A VPV+ F+ + V IDLL+AR + +P+ L +++ D
Sbjct: 258 QESSVSDLVARRKAAVPVLSFQLNSVRIDLLFARYAQQQAVPKHLPFLPGDDMQVMRGMD 317
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
+VRSL+ RV IL LVP +R+ LR +R WA+RRG+YSN AGFLGGI+WA+LV
Sbjct: 318 ATSVRSLSVARVASLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGGISWAILVC 377
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHL 302
+CQ++P A + LV RFF V WRWP P+L+ G Q WDP+ N D+ HL
Sbjct: 378 FVCQMFPRASVASLVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQWDPQHNIHDRAHL 437
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD--VDWDTLFEPFTFF 360
MPIITP +P +N++ NV+ STLR++ +EF RG I + + + W+ LF P
Sbjct: 438 MPIITPGFPAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVL 497
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP------GDF 414
Y +++ I++ A N + L W +V SR R+L ++ HT ++ HP P G
Sbjct: 498 VRYDHHVAIELRAPNEEALAEWSSFVASRTRKLVETLQ-HTPSISALHPLPDLVRAQGHE 556
Query: 415 SDKSKPLYCSYFMGL--------QRKQG-------VPV-GEGEQFDIRLTVKEFKQAVSM 458
+D+S + +F+G Q ++G PV + Q ++ K + +
Sbjct: 557 TDESDAVVGYFFIGYTVNVPSTPQPRRGDRRHSARSPVITKNSQEEL---AKNSVASATR 613
Query: 459 YTL---------RKPGMQISVAHVTRRNLPNFVFPGG 486
Y L +KPGMQ+ + + + +LP+ +FPGG
Sbjct: 614 YFLATELNTAAEKKPGMQVDINYRSWNDLPSAIFPGG 650
>gi|355709238|gb|AES03525.1| poly polymerase alpha [Mustela putorius furo]
Length = 275
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/259 (52%), Positives = 182/259 (70%), Gaps = 1/259 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 18 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 77
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 78 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 136
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 137 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 196
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SLNGCRVTD+IL LVP I NFR TLR ++ WA +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 197 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAXXHNIYSNILGFLGGVSWAMLVARTCQL 256
Query: 250 YPNAVPSMLVSRFFRVYTQ 268
YPNA+ S LV +FF V+++
Sbjct: 257 YPNAIASTLVHKFFLVFSK 275
>gi|145338191|ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase [Arabidopsis thaliana]
gi|332640894|gb|AEE74415.1| poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 249/461 (54%), Gaps = 25/461 (5%)
Query: 20 PTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLL 79
P DD+ + L + + + L S E+ V R V+ +L +IV WVK ++ L +
Sbjct: 12 PQDDE--SSISLRQLMVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQI 69
Query: 80 QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPV 139
NA I +GSY LGV+G +DID LC+GP A+ EDFF L ML EV+ELH V
Sbjct: 70 DATNATILPYGSYGLGVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCV 129
Query: 140 PDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 199
DA VP+++FKF G+ +DL YA+L + IP ++D+ L++ DE + + L+G R
Sbjct: 130 KDAKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKC 189
Query: 200 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLV 259
IL+LVP ++ F++ LRC++ WAKRRGVY N+ GFLGG++ A+L A +C PNA S L+
Sbjct: 190 ILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLL 249
Query: 260 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 319
+ FF + W+WP PV+L S G P LMPI P + +
Sbjct: 250 ANFFYTFAHWQWPTPVVLLEDTYPSTG--------APPG---LMPIQLPCGSHQYCNSTI 298
Query: 320 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDL 379
+ ST ++ EF GH + + K + W LFE + + Y + +I +SA N +DL
Sbjct: 299 TRSTFYKIVAEFLLGHNLTKDYLK--LNFSWKDLFELYPYANTYTWFTKIHLSAANQEDL 356
Query: 380 RNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVG 438
+W GWV+SR R L +KIE Y + C P+P ++ + +K ++ GLQ + + V
Sbjct: 357 SDWVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT-INVS 412
Query: 439 EGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLP 479
+ E I +F + V+ + R +I + V LP
Sbjct: 413 DIESVKI-----DFLKNVNSGSFRGTVGRIQLTLVKASQLP 448
>gi|340500382|gb|EGR27268.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 512
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 263/468 (56%), Gaps = 36/468 (7%)
Query: 4 SNGQRLGITE-----PISLAGPTDDDLMRTRKLEKYL-RDVNLYESQEEAVSREEVLGRL 57
S Q+L IT PI + L ++K+ L ++ N E++EE +++ + +L
Sbjct: 11 SQSQQLLITLQNPHIPIDKKDQPPEALKISQKILNILEKEYNYSETEEEIKQKDKKVQKL 70
Query: 58 DQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREE 117
+I+ W+ +++ K Q+ + N + FGSY+L V+ +DID +C P ++
Sbjct: 71 REIILNWISQVAEEK----QIDFKYNGDLLIFGSYKLKVNQKNSDIDAVCFVPSFVECKK 126
Query: 118 DFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
FFG+L +L++ EV ++ + VP++K ++ G+ D+ +++ S DLDI
Sbjct: 127 HFFGDLFHILSQKKEVEDIFSIQHTSVPLIKMRYFGIPFDISFSKQSQSQFKSDLDIKSI 186
Query: 178 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
ILQ DE+++R+LNG RV + + + F+ L+C++ WA+ R +YSN+ G+L GI
Sbjct: 187 QILQGMDEKSIRALNGYRVAEWFNQNIKNKDTFKKALKCIKLWAQNRCIYSNILGYLNGI 246
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEEGSLGLQVWDPRRNP 296
W++LVA+ICQLYPN ++ RFF +Y++W+W + V + I+E + + P
Sbjct: 247 AWSILVAKICQLYPNYFVYGIIERFFFLYSRWKWHDMAVQIEYIQEDIYNQMICGNQWVP 306
Query: 297 KDK-YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 355
++K M IITP +PC+N +YNV+ STLR++ ++FQ G+ I + ++KN++ D+ LF+
Sbjct: 307 ENKGISNMMIITPCFPCINCAYNVTESTLRVIQEQFQYGYRILDEIQKNQSHYDYQDLFK 366
Query: 356 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN-MLQCHPHP--- 411
PF FF+ Y +L+I I A+N ++ WKG VE LR+LT IE + ++ HP
Sbjct: 367 PFEFFKRYNAFLQIRILAKNKNEYFQWKGHVEINLRKLTKIIENGKLSKIILIHPFSKFI 426
Query: 412 --------GDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKE 451
GD+S L C YF G++ K Q DI+++ +E
Sbjct: 427 DLCLKEQLGDYS-----LGCVYFYGIKVKDN-------QNDIQISFEE 462
>gi|401881479|gb|EJT45778.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 2479]
gi|406696602|gb|EKC99884.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 8904]
Length = 573
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 256/525 (48%), Gaps = 115/525 (21%)
Query: 3 SSNGQ--RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
S NG+ LG+T PISL P + DV E + A ++ +L + Q+
Sbjct: 2 SGNGEVRMLGVTPPISLDPPKE-------------ADVKASEVRVGAGAQSPLLSNIAQL 48
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
V +V +S GL++++ EA +I+T ++RLGVHGPG+DIDT+CV P+H RE FF
Sbjct: 49 VTKFVHDVSIKNGLSEKVATEAGGRIYT-SAFRLGVHGPGSDIDTICVCPKHVYREH-FF 106
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
GE QML + P TE+ A VPVMK SGV +DLL+AR++L + LDI +D IL
Sbjct: 107 GEFQQMLRDWPACTEIS---SAFVPVMKTVISGVEVDLLFARVNLPEAGDKLDIEKDEIL 163
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 240
+ D+ + RSLN VTD IL LVP + FRT LR +R WAK F GG+ WA
Sbjct: 164 RGVDDASQRSLN---VTDMILNLVPDVATFRTALRTIRLWAK---------SFPGGVAWA 211
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
LL ARICQLYPNA PS +VS+FF +Y QW
Sbjct: 212 LLTARICQLYPNAAPSTIVSKFFPIYYQW------------------------------- 240
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
MP+ITPAYP M S++N++ ST+ I+ +E R + N W LF P FF
Sbjct: 241 --MPVITPAYPSMCSTHNITQSTMTIIKNEMLRDKIV------NNPGSSWVELFTPVDFF 292
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG-------- 412
Y+ Y+++ SA +A DL++W LR L +E T N+L HP
Sbjct: 293 SLYRTYVQVVASASSAQDLKDW-------LRTLVQDLE-MTDNVLLAHPQVNGISKTYIC 344
Query: 413 ------------------------DFSDK--SKPLYCSYFMGLQRKQGVPVG-EGEQFDI 445
D++DK +K ++F+GL ++ G + Q ++
Sbjct: 345 LTEEEQAQASQGELPPEAMMRKEEDYADKEHTKVYTKNFFIGLDIEKKPKDGQQPRQLNL 404
Query: 446 RLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRP 489
K F A + + M + + R LP F FP G P
Sbjct: 405 YYASKRFCFACQSWDKYNEQDMSVILRPCKRSELPAFCFPDGQPP 449
>gi|32527644|gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 241/441 (54%), Gaps = 23/441 (5%)
Query: 40 LYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGP 99
L S E+ V R V+ +L +IV WVK ++ L + NA I +GSY LGV+G
Sbjct: 6 LIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGLGVYGS 65
Query: 100 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 159
+DID LC+GP A+ EDFF L ML EV+ELH V DA VP+++FKF G+ +DL
Sbjct: 66 ESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGILVDLP 125
Query: 160 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 219
YA+L + IP ++D+ L++ DE + +SL+G R IL+LVP ++ F++ LRC++
Sbjct: 126 YAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLRCVKL 185
Query: 220 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCA 279
WAKRRGVY N+ GFLGG++ A+L A +C PNA S L++ FF + W+WP PV+L
Sbjct: 186 WAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFALWQWPTPVVLLE 245
Query: 280 IEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE 339
S G P LMPI P + ++ ST ++ EF GH + +
Sbjct: 246 DTYPSTG--------APPG---LMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTK 294
Query: 340 AMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 399
K + W LFE + + Y + +I +SA N +DL +W GWV+SR R L +KIE
Sbjct: 295 DYLK--LNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIE- 351
Query: 400 HTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 458
Y + C P+P ++ + +K ++ GLQ + + V + E I +F + V+
Sbjct: 352 EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT-INVSDIESVKI-----DFLKNVNS 403
Query: 459 YTLRKPGMQISVAHVTRRNLP 479
+ R +I + V LP
Sbjct: 404 GSFRGTVGRIQLTLVKASQLP 424
>gi|170054796|ref|XP_001863293.1| Poly(A) polymerase beta [Culex quinquefasciatus]
gi|167874980|gb|EDS38363.1| Poly(A) polymerase beta [Culex quinquefasciatus]
Length = 375
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/309 (45%), Positives = 198/309 (64%), Gaps = 24/309 (7%)
Query: 101 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 160
+ID LCV PR+ R+ D+FG ++L + PEVTE V + VP +K F G+ IDLL+
Sbjct: 35 TNIDALCVAPRNIERQ-DYFGSFLELLEKQPEVTECRAVEEMLVPDVKMNFDGIKIDLLF 93
Query: 161 ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 220
ARL+L IP++ D+ +D +L+N D + +RSLNGCR TD+ILRLVP I NFR LR + W
Sbjct: 94 ARLALKEIPDNFDLREDMLLKNLDPKLMRSLNGCRATDEILRLVPNIDNFRLALRSTKLW 153
Query: 221 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI 280
AK+ G+YS G+ GG++WA+LVAR CQL PN VP L + P+ V
Sbjct: 154 AKKHGIYSTSLGYFGGVSWAMLVARTCQL-PNVVPVFL-----------KRPDTV----- 196
Query: 281 EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA 340
+LG QVWDPR N + ++ LMPIITPAYP NS+++VS+ST +IM++EF RG +I +
Sbjct: 197 ---NLGFQVWDPRVNVQGRFDLMPIITPAYPQQNSTFHVSSSTRKIMLNEFNRGMQITDE 253
Query: 341 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
+ +A WD LFE +FF Y+ ++ + +++ N DDL W G VES++R L +ER
Sbjct: 254 IMLGKA--GWDKLFEAPSFFFKYRYFIVLLVTSNNTDDLLEWCGLVESKIRYLIQNLERI 311
Query: 401 TY-NMLQCH 408
+ N+ H
Sbjct: 312 LHINLAHVH 320
>gi|348669628|gb|EGZ09450.1| hypothetical protein PHYSODRAFT_304981 [Phytophthora sojae]
Length = 695
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 256/512 (50%), Gaps = 39/512 (7%)
Query: 11 ITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISR 70
I P L+ P + DL T L K + + + E+ ++ V+ L +IV IW+++
Sbjct: 160 IVVPAELSPPNEYDLRSTNGLMKCVNAIAPLPTPEQLSAKHLVINELQRIVDIWLRRTLD 219
Query: 71 AKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 130
A + A + GS+ L V +D+D + P HA E FF L + L +
Sbjct: 220 ALEGATETKSTETATLLLGGSWHLKVGMAESDLDVVAFMP-HAITSEIFFSSLCEHLGKE 278
Query: 131 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSL-WVIPEDLDI---SQDSILQNADEQ 186
V++L A VPV+ F+ S V +DLL+AR + +P+ L +++ D
Sbjct: 279 ASVSDLVARRKAAVPVLSFQLSSVRVDLLFARYAQKQAVPKHLPFLPGDDVQVMRGMDAT 338
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+VRSL+ RV IL LVP FR+TLR +R WA+RRG+YSN AG+LGGI+WALLV +
Sbjct: 339 SVRSLSVARVASLILELVPNASVFRSTLRVIRLWARRRGLYSNKAGYLGGISWALLVCFV 398
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSL---GLQVWDPRRNPKDKYHLM 303
CQ++P A + LV RFF V WRWP P+L+ G G+Q WDP N D+ HLM
Sbjct: 399 CQMFPRASVASLVHRFFSVLASWRWPTPILVAHPSNGGKVDNGVQ-WDPAHNIHDRAHLM 457
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD--VDWDTLFEPFTFFE 361
PIITP +P +N++ NV+ STLR++ +EF RG I + + + W+ LF P
Sbjct: 458 PIITPGFPAVNTAVNVNLSTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLV 517
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP-----HPGDFSD 416
Y +++ I++ A N + L W +V SR R+L ++ HT ++ HP P
Sbjct: 518 RYDHHIAIELRAPNEEALAEWSSFVASRTRKLVETLQ-HTPSVATLHPLPEIVRPQAAQA 576
Query: 417 KSKPLYCSYFMGL-------------QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTL-- 461
K + YF+G +R+ + K + + Y L
Sbjct: 577 KEDEVVGYYFIGYTINTPPLPQPRRGERRHSARAPAPKASSNEELAKNCVASATRYFLAT 636
Query: 462 -------RKPGMQISVAHVTRRNLPNFVFPGG 486
+KPGM++ + + + +LP+ VF GG
Sbjct: 637 ELDAAAEKKPGMEVEINYRSWNDLPSTVFAGG 668
>gi|397621901|gb|EJK66507.1| hypothetical protein THAOC_12570 [Thalassiosira oceanica]
Length = 756
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 243/481 (50%), Gaps = 77/481 (16%)
Query: 54 LGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 113
+GRL + WV+ ++ +GL+ A +++T GSYRLGVH PGADIDT+ V P
Sbjct: 1 MGRLH---REWVRSVAIKRGLSPDAADSAGGELYTSGSYRLGVHEPGADIDTIAVAPSFC 57
Query: 114 TREEDFFGE-------------------------LHQMLTEMPEVTELHPVPDAHVPVMK 148
+R+ DFFG L + + P VT PV +A VP++
Sbjct: 58 SRD-DFFGSNYVPPGDAMDEGDDEDGEQARDPDSLAERIRRQPHVTNFVPVENAAVPILT 116
Query: 149 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV---- 204
F + G++IDLL+ARLS IP + DI D +L D T +SLNG RVT+ I LV
Sbjct: 117 FDWEGINIDLLFARLSTSSIPRNFDIDNDLVLSGVDAATEKSLNGPRVTNLIAALVGGTE 176
Query: 205 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 264
+ Q F T +R +R WAK RG+YSN G+ GG+N + VA + QLYPNA P+ + +FF
Sbjct: 177 QRYQTFLTVVRLVRKWAKNRGLYSNKMGYWGGVNINMAVALVLQLYPNACPASALRKFFL 236
Query: 265 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 324
V+ WRWPNPV+L + LGLQVW+ + + + P+ITPAYP MNS+ +VS TL
Sbjct: 237 VFKSWRWPNPVMLTRPHDAELGLQVWNSHQ-AANMRQVAPMITPAYPAMNSTLSVSRQTL 295
Query: 325 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL--------RIDISAENA 376
+I+ +EF RGH I + + YK+Y R+ I+
Sbjct: 296 QILHEEFCRGHGIVDKL---------------------YKDYQRGRDRPGGRLCITGPTL 334
Query: 377 DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLY-------CSY 425
D + W G+VESRLR+L + + + + P F +DK+ L +Y
Sbjct: 335 HDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQLWPKKFDVCCADKTALLTHAQRANSITY 394
Query: 426 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQ-AVSMYTLRKPGMQISVAHVTRRNLPNFVFP 484
F+G + + GEQ DI + F++ + + PGM I + LP F
Sbjct: 395 FIGFRVDK--LRMRGEQLDIERQLSNFRKFELGRFHPLVPGMDILPKSFGVKELPTICFD 452
Query: 485 G 485
G
Sbjct: 453 G 453
>gi|357115984|ref|XP_003559765.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 554
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/410 (35%), Positives = 233/410 (56%), Gaps = 29/410 (7%)
Query: 14 PISLAGPT----DDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
PI++ P + D R+ L ++L + + EE +RE+V+ +L +IV W K ++
Sbjct: 75 PIAVRVPPAFLFEADFRRSHSLVQFLENEGAVPTVEEDKTREQVIRKLKEIVMDWAKVVA 134
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ + + A + T+GSY LG HGP +DID LCVGP AT + FF L Q+L
Sbjct: 135 YEQRVPPR---RVTATVLTYGSYTLGAHGPESDIDALCVGPCIATLQHHFFVALRQILER 191
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV+ + V +A VP+M+F FSG+S+DL YA+L + E ++ S L+ D ++ R
Sbjct: 192 RLEVSGMQTVENAKVPLMRFTFSGISVDLTYAQLPVVDAVEAINTSSPQFLRRLDSRSWR 251
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
SL+G RV +QI++LVP + F+ LR ++ WA+RRG++ ++ GF GI+ A+L A ICQ
Sbjct: 252 SLSGVRVNEQIVQLVPNAKKFQVLLRSIKLWARRRGLHCHLLGFFAGIHLAILAAYICQR 311
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YPNA + L + FF ++ W W PV L P + + MPI+ P
Sbjct: 312 YPNATANGLFTMFFEIFAHWDWQIPVNLHG-----------QPTNCKRSDGYYMPIVMPC 360
Query: 310 YP---CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
P CM+ N++ T + + +E RG+ + + + ++ D +W LF PF + Y+ +
Sbjct: 361 TPPELCMS---NMTKCTFKKIREELMRGYALTKDLWRH--DFEWTWLFAPFPYATRYQQF 415
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
LRI + + +++LR+W GWV+SR RQL LK+ER N L+C P+ + D
Sbjct: 416 LRIALCSPTSEELRDWTGWVKSRFRQLILKLER---NGLECDPYSSEEVD 462
>gi|301095250|ref|XP_002896726.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
gi|262108787|gb|EEY66839.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
Length = 343
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/323 (43%), Positives = 202/323 (62%), Gaps = 20/323 (6%)
Query: 177 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
D +L+ DE +VRS NG RVT++IL+LVP + FRTTL ++ WA+ RG+YSNV GFLGG
Sbjct: 4 DQVLRGMDEASVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARIRGIYSNVLGFLGG 63
Query: 237 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRN 295
+NWA+LVARICQ YPN++P+ L+SRFFR+Y W WPNP++L ++ +LG W+P+ N
Sbjct: 64 VNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKIN 123
Query: 296 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 355
+D+ HLMPIITPAYP +NSSYNV STL ++ EF RG + +E W LF
Sbjct: 124 VRDRSHLMPIITPAYPALNSSYNVMASTLCVLKTEFDRGLD--RTLEIETKKFSWAKLFV 181
Query: 356 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG--D 413
FF+ K++LR++I+A +A D W GWVESRLR L L++E + ++ HP D
Sbjct: 182 APAFFQRSKHFLRVEITARSAQDFDGWFGWVESRLRHLFLRLE--ALSDIRIHPFARFFD 239
Query: 414 FSDK--SKP-------LYCSY-FMGLQ--RKQGVPV-GEGEQFDIRLTVKEFKQAVSMYT 460
F D ++P ++ S+ F+GL+ + PV G D+ +++F +
Sbjct: 240 FIDTKDTRPESSSKCEVHTSWLFIGLKFPAPKAAPVTGATHSVDLTSVIRDFATYTDQWE 299
Query: 461 LRKPGMQISVAHVTRRNLPNFVF 483
R GM + + HVTR +P +V
Sbjct: 300 GRHGGMDMQIDHVTRSQIPEWVL 322
>gi|348680417|gb|EGZ20233.1| hypothetical protein PHYSODRAFT_442904 [Phytophthora sojae]
Length = 343
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 201/334 (60%), Gaps = 20/334 (5%)
Query: 177 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
D L+ DE +VRS NG RVT++IL+LVP + FRTTL ++ WA+ RG+YSNV GFLGG
Sbjct: 4 DRYLRGLDESSVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARVRGIYSNVLGFLGG 63
Query: 237 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRN 295
+NWA+LVARICQ YPN++P+ L+SRFFR+Y W WPNP++L ++ +LG W+P+ N
Sbjct: 64 VNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKIN 123
Query: 296 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 355
+D+ HLMPIITPAYP +NSSYNV STL I+ EF +G +E ++ W LF
Sbjct: 124 VRDRSHLMPIITPAYPALNSSYNVMASTLHILKAEFGKGFNRTLEIETKKS--SWAKLFI 181
Query: 356 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF- 414
FF+ K++LR+ I+A NA+D W GWVESRLR L L++E L+ HP F
Sbjct: 182 APVFFQRSKHFLRVQITANNAEDFDGWFGWVESRLRHLFLRLE--ALPELRIHPFARFFD 239
Query: 415 ----------SDKSKPLYCSY-FMGLQRKQGVPVGE-GEQFDIRLT--VKEFKQAVSMYT 460
+ ++ S+ F+GL PV G D+ LT +++F +
Sbjct: 240 FGETKGATPEGSSKREVHTSWLFIGLGFPAPNPVAATGGTHDVDLTSVIRDFAFYTDQWE 299
Query: 461 LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 494
R GM + + HVTR +P +V V + SK
Sbjct: 300 ARHGGMDMQIDHVTRSQIPEWVLESVVNGASDSK 333
>gi|215768734|dbj|BAH00963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 546
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 233/403 (57%), Gaps = 23/403 (5%)
Query: 18 AGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQ 77
A D R++ L ++ + S EE + R+ V+ LD+IV W K+++ DQ
Sbjct: 72 AAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAY-----DQ 126
Query: 78 LLQEAN--AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTE 135
Q N A + TFGSY LG +GP +DID +CVGP A+ + FF L QML E PEV++
Sbjct: 127 REQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSD 186
Query: 136 LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR 195
LH + +A VP+M+FKF+G+ +D Y +L + E + +L +E + R L+G R
Sbjct: 187 LHSIENAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAAVNEPSWRCLSGVR 246
Query: 196 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP 255
V QI++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A +C ++P+A
Sbjct: 247 VNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATL 306
Query: 256 SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 315
S L + FF +++ W WP PV L +++ + W P MPI+ P P
Sbjct: 307 SSLFNSFFDIFSHWHWPLPVSL--LDQPT----PWRPH-----CCSFMPIVMPCSPPEFC 355
Query: 316 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN 375
+ +++ ST + +E QRG + + ++N D++W LF PF + YK++LRI +SA
Sbjct: 356 ASSITRSTFNKIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKHFLRIVLSAPV 413
Query: 376 ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
A++LR+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 414 AEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 453
>gi|170036999|ref|XP_001846348.1| poly a polymerase [Culex quinquefasciatus]
gi|167879976|gb|EDS43359.1| poly a polymerase [Culex quinquefasciatus]
Length = 531
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/354 (39%), Positives = 212/354 (59%), Gaps = 26/354 (7%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
+G+T ISLA P +D +T +L+K N++E + + R E+L +L +VK WV+ +
Sbjct: 1 MGMTSAISLAEPKTEDHTKTVELQKAFEPYNVFEDEPKLNHRMEILSKLKTLVKQWVRNV 60
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
S +K + + L ++ KI+TFGSYRL V+ G +ID LC PR+ R+ D+FG ++L
Sbjct: 61 SISKNMPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCEAPRNIERQ-DYFGSFFELLK 119
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+ PEVT V +A VPV+ F G+ IDLL+ARL+L IP++ D+ +D +L+N D + V
Sbjct: 120 KQPEVTGCRAVEEALVPVINMNFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLV 179
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
VP R R G+YSN G+ GG++W +LVAR CQ
Sbjct: 180 ER-------------VP---------RHRRDPTAEHGIYSNSLGYFGGVSWGMLVARTCQ 217
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
L PN + + V +FF V+ +W+WP PV L + +LG QVWD R N +D++HLM IITP
Sbjct: 218 L-PNVIAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITP 276
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
AYP NS+++VS+ST ++M++EF +I + + +A WD LFE ++ E+
Sbjct: 277 AYPQQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKA--GWDKLFEAPSWSES 328
>gi|219117850|ref|XP_002179712.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408765|gb|EEC48698.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 336
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 203/340 (59%), Gaps = 30/340 (8%)
Query: 50 REEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVG 109
RE VL R+ ++ + W++ + KGL+ ++ A ++FT GSYRLGVH PGADIDT+ V
Sbjct: 1 RERVLNRMGELCRDWIRTVCIKKGLSTDVVNVAGGQLFTSGSYRLGVHEPGADIDTILVS 60
Query: 110 PRHATREEDFFG-----------------ELHQMLTEMPEVTELHPVPDAHVPVMKFKFS 152
P +A + DFFG L + + P+VT PV A VP++ F +
Sbjct: 61 P-NACQRMDFFGTTILSTVEGEEGTRDPTSLAERIRTHPDVTNFVPVESAAVPILTFDWE 119
Query: 153 GVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP----KIQ 208
G++IDLL+ARL+ +P D DI D++L AD T +SLNG RVT+ I LV + Q
Sbjct: 120 GINIDLLFARLNTASVPPDFDIDNDAVLDGADGATEKSLNGPRVTNLIAALVSGTPQRYQ 179
Query: 209 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 268
F T +RC+R WAK RG+YSN G+ GG+N + VA + QLYPNA + L+ +FF V+
Sbjct: 180 VFLTVVRCVRKWAKARGLYSNKMGYWGGVNINIGVALVVQLYPNACGASLLRKFFLVFKT 239
Query: 269 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 328
WRWP P+LL + GL VW + + P+ITPAYP MNS+ VS TL+I+
Sbjct: 240 WRWPQPLLLTKPHDAGYGLPVWSVATAVR---QVAPMITPAYPAMNSTLAVSRQTLQILQ 296
Query: 329 DEFQRGHEICEAM----EKNEA-DVDWDTLFEPFTFFEAY 363
+EF RGH + + + +KN A +++W+TLFEP FF Y
Sbjct: 297 EEFNRGHTVVDQLWKDYQKNPAQELNWNTLFEPSDFFINY 336
>gi|428177976|gb|EKX46853.1| hypothetical protein GUITHDRAFT_162826 [Guillardia theta CCMP2712]
Length = 572
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/494 (31%), Positives = 260/494 (52%), Gaps = 32/494 (6%)
Query: 12 TEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRA 71
+P+S GP+ D+ KL + L+ + YE +E RE+ L +++I+K W +I +
Sbjct: 30 AQPLSFDGPSVADMQLNDKLMETLKQLGAYEDKECNKRREQALENIEKIMKTWTCEICKT 89
Query: 72 KGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP 131
K N L + + ++ FGSY LGVH +DID LC+ P R E FF + L E+
Sbjct: 90 K--NISLDFDCSCRVAPFGSYCLGVHSHDSDIDLLCIIPEVVNRSE-FFSRVPAKLAEVE 146
Query: 132 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD-SILQNADEQTVRS 190
+T + + DA PV+KF++ G IDL R+ IP DL+I+ D +L+ D + +
Sbjct: 147 GITCIKSLADAFAPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIEDTKDITC 206
Query: 191 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 250
LNG RVT ++L+ VP I+NF+ LR ++ WA+RR +YS + GF GG+ W ++ A++ QLY
Sbjct: 207 LNGPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSKIIGFPGGVAWGIMAAQVAQLY 266
Query: 251 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-------LGLQVWDPRRNPKDKYHLM 303
P PS+L+ +FF +Y W++ + +++ EE L WDP R + L
Sbjct: 267 PKMCPSLLLEKFFHLYKHWKFEDAIIVAPPEECQAPDGQERYNLHAWDPTRRHFSRRPLT 326
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
+ITP YP NS++NV+ S L ++ +E R + + + + + E+ ++ LFEP FF+ Y
Sbjct: 327 -VITPTYPMDNSTFNVTDSALNVIRNEISRANSLTQGLAQGES--SYNDLFEPAMFFKQY 383
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP-----------HPG 412
+++I++ + + + G+VES++R+L K+ + HP H G
Sbjct: 384 GTFVQIEVLG-SEKHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIPAEHLG 442
Query: 413 DFSDKSKPLYCSYF-MGLQRKQGVP---VGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQI 468
+ P +F +GL+ + G+ D VKEF + ++ I
Sbjct: 443 GGDPEDGPWQNIFFYLGLKFDDNLVRHMKASGQSVDFTQPVKEF--LLGIHITDPTQTSI 500
Query: 469 SVAHVTRRNLPNFV 482
S+ V RR LP +V
Sbjct: 501 SIKVVKRRALPEWV 514
>gi|340506959|gb|EGR32994.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 502
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 260/447 (58%), Gaps = 31/447 (6%)
Query: 50 REEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVG 109
++E +L I+K W+++I+ K Q+ + FGSY+L V+ G+DID +C+
Sbjct: 62 KDEAAKQLRIIIKNWIQQINAEK----QIENNHGGDLLFFGSYKLKVNSRGSDIDAVCLC 117
Query: 110 PRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIP 169
P + RE++FFG+L +L++ E+TEL P+ +A VP++K +F G+ DL +AR
Sbjct: 118 PFYVEREKNFFGDLVHILSQKKEITELFPIQEASVPIIKMQFQGILFDLSFARAPTQFQS 177
Query: 170 EDLDISQDSILQNADEQTVRSLNGCRVTDQILRL--VPKIQNFRTTLRCMRFWAKRRGVY 227
+ +D++ + +L DE++ +S NG RV + + + + +NF++ L+C++ WA+ RG+Y
Sbjct: 178 DKIDLTSNQMLLGMDERSCKSFNGYRVAEWLSKKENIQNYENFQSILKCIKLWAQNRGIY 237
Query: 228 SNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEEGSLG 286
SN+ G+L GI W +LV++ICQL+PN + L+ RFF +Y++WRW + PV + I +
Sbjct: 238 SNIIGYLSGIGWTILVSKICQLFPNYSLNQLLERFFFLYSRWRWQDFPVQVEYIVDDVAN 297
Query: 287 LQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE-ICEAME--K 343
++ + P+ K +M IITP +PCMN ++NVS++TLRI+ ++ G+E IC+ K
Sbjct: 298 SKLSADQWRPEYKSSMM-IITPCFPCMNCAHNVSSTTLRIIQEQLWHGYETICKIQNGSK 356
Query: 344 NEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY- 402
N +D LF+ F FF+ YK++L I I A N +D WKG VES LR+LT E Y
Sbjct: 357 NYSD-----LFKSFKFFKKYKHFLEIKILATNKNDYTVWKGHVESGLRKLTRLFESPQYM 411
Query: 403 NMLQCHPHPG---DFSDKSK------PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFK 453
N+L+ HP+P +F D ++ C Y+ GL Q E +++ F
Sbjct: 412 NLLEVHPYPSYIENFLDDTQSQKNKYKFQCKYYYGLMCLQS---ENNESINLKEACVYFV 468
Query: 454 QAVSMYTLRK--PGMQISVAHVTRRNL 478
+ + MY + K M I +H+ R L
Sbjct: 469 EQLEMYPMNKVLESMNIQCSHLLRSEL 495
>gi|428177975|gb|EKX46852.1| hypothetical protein GUITHDRAFT_94125 [Guillardia theta CCMP2712]
Length = 613
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 232/406 (57%), Gaps = 15/406 (3%)
Query: 12 TEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRA 71
+P+S GP+ D+ KL + L+ + YE +E RE+ L +++I+K W +I +
Sbjct: 30 AQPLSFDGPSVADMKLNDKLMETLKQLGAYEDKECNQRREQALENIEKIMKTWTCEICKT 89
Query: 72 KGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP 131
K N L + + ++ FGSY LGVH +DID LC+ P R E FF + L E+
Sbjct: 90 K--NISLDFDCSCRVVPFGSYCLGVHSHDSDIDLLCIIPEVVNRSE-FFSRVPAKLAEVE 146
Query: 132 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD-SILQNADEQTVRS 190
+T + + DA VPV+KF++ G IDL R+ IP DL+I+ D +L+ D + +
Sbjct: 147 GITCIKSLADAFVPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIEDTKDITC 206
Query: 191 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 250
LNG RVT ++L+ VP I+NF+ LR ++ WA+RR +YSN+ GF GG+ W ++ A++ QLY
Sbjct: 207 LNGPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSNIIGFPGGVAWGIMAAQVAQLY 266
Query: 251 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-------LGLQVWDPRRNPKDKYHLM 303
P PS+L+ +FF +Y W++ + +++ EE L WDP R+ + L
Sbjct: 267 PKMCPSLLLEKFFFLYKHWKFEDAIIVAPPEECQAPDGQERYNLHSWDPTRHHFSRRPLT 326
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
+ITP YP NS++N++ S L ++ +E R + + + + + E+ ++ LFEP FF+ Y
Sbjct: 327 -VITPTYPMANSTFNITDSALNVIRNEISRANSLTQGLAQGES--SYNDLFEPAMFFKQY 383
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 409
+++I++ + + + G+VES++R+L K+ + HP
Sbjct: 384 GTFVQIEVLG-SEKHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHP 428
>gi|327262763|ref|XP_003216193.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Anolis carolinensis]
Length = 678
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 150/382 (39%), Positives = 229/382 (59%), Gaps = 17/382 (4%)
Query: 122 ELHQMLTE-MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
+L+ ++ E + EV + V DA+VPV+KF+F G+ IDL++ARL+L I ++LD+ DS L
Sbjct: 90 KLNNLVKEWIAEVGKNKAVEDAYVPVIKFEFDGIEIDLVFARLALPTISDNLDLRDDSSL 149
Query: 181 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGF--LGGIN 238
++ D + +RSLNG RVTD+IL LVP +NFR TLR ++ WAKR+ + + + + L I+
Sbjct: 150 KSLDIRCIRSLNGFRVTDEILHLVPNKENFRLTLRAIKLWAKRKYLINLILCYQPLCLIS 209
Query: 239 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 298
WA+L C++Y N S V+R + ++ WPNPVLL EE +L L VWDPR NP D
Sbjct: 210 WAVLSXITCKIYQNGRGSFSVNRCYSSFSFREWPNPVLLKEPEESNLNLPVWDPRVNPSD 269
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
+YHLMPIITPAYP NS+YNVSTST IM++EF+ G + + + + ++ DW L EP
Sbjct: 270 RYHLMPIITPAYPQQNSTYNVSTSTRAIMVEEFKHGLVVADEIFQGKS--DWPKLLEPPN 327
Query: 359 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDK 417
FF+ YK+Y+ + S+ + W G VES++R L +ER+ + L H +P F ++
Sbjct: 328 FFQKYKHYIVLTASSSTEEHHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNR 386
Query: 418 SKPLYCSY----FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQIS 469
++P Y F+G+ K+ E D+ ++ F V + + K GM+I
Sbjct: 387 TQPKESDYVSLWFLGIIFKKA-ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIE 445
Query: 470 VAHVTRRNLPNFVFPGGVRPSR 491
HV ++ L ++ P + R
Sbjct: 446 ATHVKKKQL-HYYLPADLLQKR 466
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+R GIT PIS+A P D D + T KL + ++ ++E +EE R VL +L+ +VK W+
Sbjct: 41 RRYGITSPISVAFPRDVDRIYTEKLIEAMKPFGVFEDEEELNRRVVVLDKLNNLVKEWIA 100
Query: 67 KISRAKGLND 76
++ + K + D
Sbjct: 101 EVGKNKAVED 110
>gi|12322673|gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 239/441 (54%), Gaps = 24/441 (5%)
Query: 40 LYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGP 99
L S E+ V R V+ +L +IV WVK ++ L + NA I +GSY LGV+G
Sbjct: 6 LIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGLGVYGS 65
Query: 100 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 159
+DID LC+GP A+ DFF L ML EV+ELH V DA VP+++FKF G+ +DL
Sbjct: 66 ESDIDALCIGPFFASIA-DFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGILVDLP 124
Query: 160 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 219
YA+L + IP ++D+ L++ DE + + L+G R IL+LVP ++ F++ LRC++
Sbjct: 125 YAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLLRCVKL 184
Query: 220 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCA 279
WAKRRGVY N+ GFLGG++ A+L A +C PNA S L++ FF + W+WP PV+L
Sbjct: 185 WAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPVVLLE 244
Query: 280 IEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE 339
S G P LMPI P + ++ ST ++ EF GH + +
Sbjct: 245 DTYPSTG--------APPG---LMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTK 293
Query: 340 AMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 399
K + W LFE + + Y + +I +SA N +DL +W GWV+SR R L +KIE
Sbjct: 294 DYLK--LNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIE- 350
Query: 400 HTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 458
Y + C P+P ++ + +K ++ GLQ + + V + E I +F + V+
Sbjct: 351 EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT-INVSDIESVKI-----DFLKNVNS 402
Query: 459 YTLRKPGMQISVAHVTRRNLP 479
+ R +I + V LP
Sbjct: 403 GSFRGTVGRIQLTLVKASQLP 423
>gi|405977000|gb|EKC41473.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 264
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 124/256 (48%), Positives = 179/256 (69%), Gaps = 4/256 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISL GP DL + KLE+ +R ++ES+EE R E+L R++ +V+ W+K +S
Sbjct: 9 GITSPISLEGPKLVDLKLSEKLEEAMRPHGVFESEEEMSHRMEILNRINTLVRKWIKDVS 68
Query: 70 RAKGLNDQLLQEANA---KIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
R K + L + NA K+ FGSYRLG H GADIDT+C+ P H R DFF ++
Sbjct: 69 RQKSEINYLEYKINAFGGKVCIFGSYRLGAHTKGADIDTVCIAPGHVDRS-DFFSSFVEV 127
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L PEV +L + +A+VP++K F G+ +D+++ARL+L IP+++D+ +S+L++ + +
Sbjct: 128 LKHTPEVKDLRAIEEAYVPLIKMTFDGIELDMVFARLTLPQIPDEIDLRDESLLRHLNTK 187
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
VRSLNGCRVTD+IL LVP NFR TL ++ WAK++G+YS V GFLGG++WA+LVAR+
Sbjct: 188 CVRSLNGCRVTDEILHLVPNQHNFRRTLLAIKIWAKKKGIYSKVLGFLGGVSWAILVARV 247
Query: 247 CQLYPNAVPSMLVSRF 262
CQLYPNA P+ L+ +F
Sbjct: 248 CQLYPNAAPATLLHKF 263
>gi|148686801|gb|EDL18748.1| poly (A) polymerase alpha, isoform CRA_b [Mus musculus]
Length = 540
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 187/298 (62%), Gaps = 19/298 (6%)
Query: 193 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 252
GCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 4 GCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPN 63
Query: 253 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 312
A+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 64 AIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 123
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 372
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ + S
Sbjct: 124 QNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLAS 181
Query: 373 AENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFM 427
A W G VES++R L +E++ + L Q P P + D+ + + +
Sbjct: 182 APTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWVI 240
Query: 428 GLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 478
GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 241 GLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 294
>gi|242212591|ref|XP_002472128.1| predicted protein [Postia placenta Mad-698-R]
gi|220728772|gb|EED82659.1| predicted protein [Postia placenta Mad-698-R]
Length = 438
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 156/405 (38%), Positives = 213/405 (52%), Gaps = 84/405 (20%)
Query: 35 LRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRL 94
LR +E++EEA RE VLGRL +VK +V +I +GL+ + + KIFTFGSYRL
Sbjct: 4 LRRQGTFETEEEAKRREIVLGRLASLVKRFVTRIGIKQGLSQAAAEASGGKIFTFGSYRL 63
Query: 95 GVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGV 154
GVHGPG+DIDTLCV P+H +R EDFF + +ML V E VPDA+VP++K K SG+
Sbjct: 64 GVHGPGSDIDTLCVVPKHVSR-EDFFEDFEEMLKATEGVDEASAVPDAYVPIIKTKISGI 122
Query: 155 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 214
IDLL ARL+L IP+ L + D++L+N DE
Sbjct: 123 PIDLLMARLALSSIPDTLTLQDDNLLRNLDE----------------------------- 153
Query: 215 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 274
RC+ Y N A+ +VSRFF + QW WP P
Sbjct: 154 RCL---------YPN-----------------------AIAGAIVSRFFIIMYQWTWPQP 181
Query: 275 VLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 334
VLL IEEG L ++VW+P+ P D+ H MPIITPAYP M +++NV+ ST IM +EF++G
Sbjct: 182 VLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATHNVTASTQMIMTEEFKKG 241
Query: 335 H----------------EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD 378
EI + + A DW LF FF Y+ YL++ S +++
Sbjct: 242 QLEFYSPGRYLLFLAGSEIVDRVIVGSA--DWSELFSKHDFFHKYRYYLQVIASTGSSEL 299
Query: 379 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 423
W G VESR+RQL +K+E + ++ HP F + L+C
Sbjct: 300 QIKWAGTVESRIRQLVMKLE-YVDSLTLAHPFIKGF---EQVLHC 340
>gi|357112525|ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 537
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/390 (36%), Positives = 228/390 (58%), Gaps = 19/390 (4%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEAN 83
D++R+ L K++ + SQEE REEV+ LD+IV W K+++ + +
Sbjct: 72 DVVRSVSLLKFIAGAGVVPSQEEEQRREEVVRELDKIVMDWAKQVAYDQRDKHWI---TT 128
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 143
+ TFGSY LG +GP +DID +CVGP A+ + FF L QML E PEV++LH + A
Sbjct: 129 GTVLTFGSYALGAYGPESDIDAVCVGPCVASLQHHFFVVLRQMLEERPEVSDLHSIESAR 188
Query: 144 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
VP+M+FKF+GVS+D Y +L + E + +L+ D + R L+G RV QI++L
Sbjct: 189 VPLMRFKFNGVSVDFPYVQLPVINAAEAIRAFDPRLLEKVDGASWRCLSGVRVNRQIMQL 248
Query: 204 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 263
VP ++ F+ LRC++ WA++RG+Y ++ G+ GI+ A+L A +C+ +PNA + L S FF
Sbjct: 249 VPNMKRFQVLLRCLKLWARKRGIYCHLVGYFAGIHLAVLGAYVCRRHPNASVNTLFSMFF 308
Query: 264 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 323
+++ W WP PV A+ + + +W P D LMPI+ P +P + +++ ST
Sbjct: 309 DIFSHWPWPLPV---ALHDQA---PLWGP-----DGCSLMPIVMPCFPPEFCASSITKST 357
Query: 324 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 383
+ +E +RG + + + D+DW +F P+ + Y+++L + +SA ++LR+W
Sbjct: 358 FNKIKEELRRGFALTK--DIRNVDIDWTWIFAPYPYTVKYEHFLHMVLSAPTTEELRDWV 415
Query: 384 GWVESRLRQLTLKIERHTYNMLQCHPHPGD 413
GWV+SR R L LK+E + C P P +
Sbjct: 416 GWVKSRFRNLILKLESLD---VDCDPDPSE 442
>gi|294892267|ref|XP_002773978.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239879182|gb|EER05794.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 534
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 180/514 (35%), Positives = 270/514 (52%), Gaps = 54/514 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
Q+ G++ P+SL+ T D+ T + K L + S+EE + V + ++V W K
Sbjct: 10 QQWGVSPPVSLSKATPKDIAATDVMMKVLDEEAPPASEEERQLHKRVFELMSRLVTEWGK 69
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+ + + GL ++ + ++ GS RLG+ P +DID + V TR D F EL +
Sbjct: 70 EYAFSTGLKEE---DCRCELMAIGSARLGLQDPSSDIDCVVVAAHKVTR--DAFFELFPL 124
Query: 127 -LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 185
L+E+ +VT L+PVP A VPV+K KF GV +D+LY L+ + +D + D++L DE
Sbjct: 125 KLSELNDVTNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGPAIDPADDNLLCGMDE 184
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
++ RS+NG RV+D I VP +F LR +R WA+RRG+YSN G+LGG++WA+LVAR
Sbjct: 185 KSARSINGVRVSDAIKACVPHFAHFLGALRVIRAWARRRGIYSNALGYLGGVSWAILVAR 244
Query: 246 ICQLYPNAVPSMLVSRFFRVYTQWRW---PNPVLLCAIE----EGSLGLQVW--DPRRNP 296
+CQL+PN PS LV RFFRVY++W W V+L E EG +VW P+R
Sbjct: 245 VCQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVWCPPPKRTT 304
Query: 297 KDK-----YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA----MEKNEAD 347
D+ M +ITPAYP MNS++ V+ T+ + E +RG I + + E
Sbjct: 305 TDQPLPLAASPMAVITPAYPSMNSTFGVTRMTMDTIKKELERGAGIISSKGVDLRSREC- 363
Query: 348 VDWDTLFEPFTFFE----AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK----IER 399
W+TL EP FF+ YK +L+I+I + ++ +G V S+L+ L L+ +
Sbjct: 364 --WETLLEPIHFFDYDQGGYKQFLQIEIGGASELSHKSAEGLVNSKLKPLLLRKMPEVAP 421
Query: 400 HTYNMLQCHPHPGDFS----DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ- 454
N G + K P + F+GL +P G D+R V+EF +
Sbjct: 422 EDTNKAPYRAWTGAVALEDPYKEYPYCSALFVGLS----IPPG----MDLRPAVREFMER 473
Query: 455 -----AVSMYTLRKPGM-QISVAHVTRRNLPNFV 482
A M + GM + V HV +LPN V
Sbjct: 474 LGIELATQMPEYKAGGMFDVRVRHVAGPSLPNTV 507
>gi|294895248|ref|XP_002775109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881038|gb|EER06925.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 413
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 130/289 (44%), Positives = 181/289 (62%), Gaps = 7/289 (2%)
Query: 11 ITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISR 70
I PIS AGPT DL + + ++L S+E+ RE+ L L+ ++ W+ ++
Sbjct: 18 IWAPISEAGPTVADLKQNEGMLEFLTTAAPEASKEDREKREKALRVLEGVIGDWLTEVGV 77
Query: 71 AKGLN--DQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+G+ + Q N K+FTFGS+RLG+ P +DID LCV PRH TRE FFG L L
Sbjct: 78 QQGMTAENARKQSNNGKLFTFGSHRLGLISPSSDIDCLCVAPRHVTREA-FFGSLVGKLQ 136
Query: 129 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+M EV + PVPDA+ P++K GV IDLL+ARL+L D+ D +L+N D+++V
Sbjct: 137 QMDEVETVTPVPDAYAPIIKLVCCGVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSV 196
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
R +NG RV D IL+LVP FR LR ++ WAKRRG+Y+N+ GF GGI WA+LVAR+CQ
Sbjct: 197 RCVNGTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQ 256
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEGSLGLQVWDPR 293
++PN LV RFF + ++W W NPV LC I E G + +VW+P+
Sbjct: 257 MFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPK 305
>gi|325184553|emb|CCA19046.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 799
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 251/474 (52%), Gaps = 40/474 (8%)
Query: 42 ESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGA 101
E++E + +L + + W+K + GL + + +F GSYRLG+H P +
Sbjct: 284 ETEETKPMKVRMLKSISDALNRWIKVLGYEVGLTQEQIAITQGALFLAGSYRLGLHDPDS 343
Query: 102 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYA 161
DID +C P H + DFF +LT M +VTEL VP+A VP++ + + +DLL+A
Sbjct: 344 DIDVVCAVPYHVS-HRDFFCGFSAVLTRMTQVTELVTVPNASVPLISLSYQSIKLDLLFA 402
Query: 162 RLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWA 221
+L L I DLDI D IL +V+SLN RV+ IL LVP Q FR R +R WA
Sbjct: 403 QLPLLSIGADLDIHSDHILAGVSAASVKSLNAPRVSSMILSLVPNRQVFRRVSRAIRAWA 462
Query: 222 KRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE 281
+RRG+YS+ G+L GINWALL A +CQL+P S + FF V ++W+WP P++L
Sbjct: 463 RRRGIYSSKLGYLSGINWALLTAFVCQLFPGRTVSYVFVHFFYVLSEWQWPKPIMLNIPY 522
Query: 282 EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE-- 339
+ LGL+ W + +D+ H+MPIITPAYP MNSS V+ STL ++ +E R ++ E
Sbjct: 523 DAKLGLECWSFQL--RDRTHVMPIITPAYPQMNSSAQVTASTLSVIKEELWRARDLLERE 580
Query: 340 -------------------AMEKNEAD--VDWDTLFEPFTFFEAYKNYLRIDISAENADD 378
A+EK + D + WD L++P +FF Y Y+ + I +++ +
Sbjct: 581 ILSSITSHQQDQRTRKEAGALEKPDTDTFLSWDVLYQPSSFFVRYDWYVGLTIQIDSS-E 639
Query: 379 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQG---- 434
L W+ +V SRL +L +K+ + + H +P +K+ S F+GL+R+
Sbjct: 640 LGRWETFVCSRLHKL-VKMLQDLPMIDLVHGYPQFLVNKAGS---SLFLGLKRRSEDDEE 695
Query: 435 --VPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGG 486
V F I +++ Q+ R MQ + + +LP+FVF G
Sbjct: 696 FLSSVNRTISFFIATDLQQNAQSSESPAKR---MQTTAVLLNWDDLPDFVFENG 746
>gi|240274559|gb|EER38075.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus H143]
Length = 493
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/261 (47%), Positives = 175/261 (67%), Gaps = 4/261 (1%)
Query: 155 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 214
SIDL+YARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR L
Sbjct: 50 SIDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLAL 109
Query: 215 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 274
R ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S +V +FFR+ QW+WP P
Sbjct: 110 RAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQP 169
Query: 275 VLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 334
VLL IEEG L ++VW+P+ DKYHLMPIITPAYP M +++NVS ST +++ E +RG
Sbjct: 170 VLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRG 229
Query: 335 HEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQL 393
+I + + + + W+ LF TFF + YK YL I ++ + D W G VES+LR L
Sbjct: 230 GDIADKIFVGQ--LSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHL 287
Query: 394 TLKIERHTYNMLQCHPHPGDF 414
++R + ++ HP P F
Sbjct: 288 VGALDRKS-SIEIAHPFPKGF 307
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 410 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 467
HP D LY + Y++GL+ K VP G DI FK + + +PG+
Sbjct: 365 HPN--GDNGCTLYTTTYYIGLELKPLVP-GASRSLDISADTHIFKSTCTSWAQYQPGIND 421
Query: 468 ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 526
+++ HV +LP VF PG VRPSRP K KV ++P A ++ D
Sbjct: 422 LNITHVRNYDLPEDVFQPGEVRPSRPKK-----------KVVKKSEPTAQ--KRNIHALD 468
Query: 527 NVDTHLRNAKCHAT---MPSSSG 546
N AK HA+ MPS++
Sbjct: 469 NEAPSENPAKRHASPNGMPSAAA 491
>gi|226492962|ref|NP_001152292.1| LOC100285931 [Zea mays]
gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 224/395 (56%), Gaps = 18/395 (4%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEAN 83
D R+R L K++ D + S E+ RE V+ L +IV W K+++ +G + A+
Sbjct: 69 DECRSRSLLKFISDAGIVPSLEDERRRERVVRELGKIVMDWAKRVAYEQGNWHWI---AS 125
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 143
A + TFGSY LG +GP +DID LC+GP A+ + FF L QML PEV+ELH + A
Sbjct: 126 ATVLTFGSYALGAYGPESDIDVLCIGPCIASLQHHFFVVLRQMLEGRPEVSELHSIEGAK 185
Query: 144 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
VP+M+FKF+G+ +D Y +L + E + +L+N D + R L+G R QI++L
Sbjct: 186 VPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQL 245
Query: 204 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 263
VP ++ F+ LRC++ WA++RG++ ++ GF GI+ A+L A +C+ +PNA + L+S FF
Sbjct: 246 VPNMKKFQYLLRCLKLWARKRGLHCHLLGFFAGIHLAILAAYVCRRHPNASINTLLSLFF 305
Query: 264 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 323
++ W WP PV L L P R P D LMPI+ P P S + + ST
Sbjct: 306 DIFVHWPWPLPVSL---------LDPPVPCRGP-DGCSLMPIMLPCIPPEFCSSSTTEST 355
Query: 324 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 383
+ +E RG+ + + + D +W LF PF + YK +LRI +SA ++LR+W
Sbjct: 356 FSKIKEELWRGYALSK--DTRSTDFNWSWLFAPFPYGARYKCFLRIVLSAPMGEELRDWV 413
Query: 384 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
GWV+SR R L LK+E + C P P + D +
Sbjct: 414 GWVKSRFRNLLLKLESLG---VYCDPDPSEQVDHT 445
>gi|414888171|tpg|DAA64185.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 545
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 225/410 (54%), Gaps = 40/410 (9%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEAN 83
D R+ L ++L+D S E+ RE+V+ L +IV W ++ + + L A
Sbjct: 78 DHRRSSSLVQFLKDEGAVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQGL---AT 134
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 143
A + T+GSY LG HGP +DID LC+GP AT + FF L Q+L PEV+E+H V A
Sbjct: 135 ATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEKAK 194
Query: 144 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
VP+M+F+F+G+++DL YA+L + + ++ +LQ D ++ RSL+G RV +QI++L
Sbjct: 195 VPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIVQL 254
Query: 204 VP---------KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 254
VP +Q F+T LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+A
Sbjct: 255 VPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDAS 314
Query: 255 PSMLVSRFFRVYTQWRWPNPVLL------CAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
S L + FF+ + W W PV L C EG LMPI+ P
Sbjct: 315 VSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEG-----------------RLMPIVMP 357
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
P + V+ +L+ + +E RG+ + ++ D W LFEPF + + Y+ +LR
Sbjct: 358 CTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRH--DFQWSWLFEPFPYDQKYQQFLR 415
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
I + A +L +W GWV+SR R L LK+ER ++C P P + D +
Sbjct: 416 IALRAPTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHT 462
>gi|9453844|dbj|BAB03278.1| poly A polymerase [Drosophila melanogaster]
Length = 459
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/328 (40%), Positives = 192/328 (58%), Gaps = 40/328 (12%)
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LV
Sbjct: 2 DHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLV 61
Query: 244 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
AR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH M
Sbjct: 62 ARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHPM 121
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF Y
Sbjct: 122 PIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRY 179
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK------ 417
++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 180 RHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSAN 238
Query: 418 -----------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 454
S P +F+GL+ ++ E D+ +++ F +
Sbjct: 239 NSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTE 294
Query: 455 AVSMY----TLRKPGMQISVAHVTRRNL 478
V M+ + K GM I HV R+ L
Sbjct: 295 HVMMHGVNIKMLKEGMTIDARHVKRKQL 322
>gi|24059888|dbj|BAC21354.1| poly(A) polymerase-like protein [Oryza sativa Japonica Group]
Length = 472
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 213/373 (57%), Gaps = 23/373 (6%)
Query: 26 MRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAK 85
M +R+ L+D S E RE+V+ +L++IV W K ++ + + + A A
Sbjct: 16 MDSRRTTSLLQDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRVPPR---RATAT 72
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 145
+ T+GSY LG HGP +DID LCVGP AT + FF L Q+L + PEV+EL V A VP
Sbjct: 73 VLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVESAKVP 132
Query: 146 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 205
+M+F+FSG+S+D YA+L + S +LQ D + RSL+G RV +QI++LVP
Sbjct: 133 LMRFRFSGISVDFTYAQLP------AIITSNPHLLQKLDSLSWRSLSGVRVNEQIVQLVP 186
Query: 206 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 265
Q F+ LRC++ WAKRRG++ ++ GF GI+ A+L A +CQ YP + L + FF +
Sbjct: 187 NAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLFTIFFDI 246
Query: 266 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 325
+ W W PV SL Q + RR P + MPI+ P P + N++ T +
Sbjct: 247 FAHWNWQIPV--------SLHGQPTNCRR-PDGSF--MPILLPCTPPEFCTSNMTKGTFK 295
Query: 326 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 385
+ +E RG+ + + E D +W LF PF + Y+ +LRI + A +++LR+W GW
Sbjct: 296 KIREELMRGYALTK--EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWAGW 353
Query: 386 VESRLRQLTLKIE 398
V+SR L LK+E
Sbjct: 354 VKSRF-NLILKLE 365
>gi|395539230|ref|XP_003771575.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 379
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/257 (50%), Positives = 174/257 (67%), Gaps = 1/257 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
+ GIT PISL P + D + T+KL + L+ ++E ++E R +LG+L+ +VK W+
Sbjct: 118 KHYGITSPISLVAPKETDCILTQKLIETLKPFGVFEEEKELQRRILILGKLNNLVKEWIW 177
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+IS +K L + + KIFTFGSYRLGVH GADID LCV PRH + DFF ++
Sbjct: 178 EISESKNLPQSVNENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVD-QSDFFTSFYEK 236
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 186
L EV +L V +A VPV+K F G+ ID+L+ARL+L PEDLD+ DS+L+N D +
Sbjct: 237 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTFPEDLDLHDDSLLKNLDIR 296
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 297 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKIWAKHHNIYSNILGFLGGVSWAMLVART 356
Query: 247 CQLYPNAVPSMLVSRFF 263
CQLYPNA+ S S +
Sbjct: 357 CQLYPNAIASTQTSAHY 373
>gi|72391414|ref|XP_846001.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175902|gb|AAX70026.1| poly(A) polymerase, putative [Trypanosoma brucei]
gi|70802537|gb|AAZ12442.1| poly(A) polymerase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 687
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 204/389 (52%), Gaps = 24/389 (6%)
Query: 42 ESQEEAVSREEVLGRLDQIVKIWVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPG 100
E +EEA R VL ++ IV+ W++ A+ + + + +IF GSYR VHG G
Sbjct: 39 EPEEEANRRRSVLEHINCIVRAWIRSTMIAEFRMPAEAAAQVEGRIFATGSYRYNVHGSG 98
Query: 101 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 160
+DID + + P TRE FF L L+ +TELH + DA VP++ G+ IDL +
Sbjct: 99 SDIDIVLIAPNRITREH-FFNTLAPRLSHESRITELHCIRDARVPLIAMVADGIDIDLSF 157
Query: 161 ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 220
+ +PE + D +LQ D+Q+V S N RV I+ LVP +FR LR ++ W
Sbjct: 158 GSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAW 214
Query: 221 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP------ 274
K RG+YSN GF GI WA+LVA +CQ +PN + +V RFFR+Y W PNP
Sbjct: 215 GKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRE 274
Query: 275 ---VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 330
+ L L + WDPR + D L P++TPA P N+ YNV+ + LR + DE
Sbjct: 275 NRAIYLTETMRVKTNLGRGWDPRESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDE 334
Query: 331 FQRGHEICEA-----MEKNEADVD----WDTLFEPFTFFEAYKNYLRIDISAENADDLRN 381
F RGHEIC + +E+ + + W + EP FF YK YL + ++ +A+ +
Sbjct: 335 FARGHEICSSYIGMGVEETKMKLGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQG 394
Query: 382 WKGWVESRLRQLTLKIERHTYNMLQCHPH 410
+ VES++R L L+ PH
Sbjct: 395 YVDAVESKIRFLWAGTAESRAQSLESFPH 423
>gi|413955904|gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 508
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 148/415 (35%), Positives = 227/415 (54%), Gaps = 34/415 (8%)
Query: 14 PISLAGPTDD----DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
PI +A P + D R+R L K++ + + S E+ RE V+ L +IV W ++++
Sbjct: 55 PIPVALPHEVIMYMDECRSRSLLKFISNAGIEPSLEDERRRERVVRELGKIVMDWARRVA 114
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+G + +A + TFGSY LG +GP +DID LC+GP A+ + FF L QML
Sbjct: 115 YEQGKQHWI---TSATVLTFGSYALGAYGPESDIDVLCIGPYIASLQHHFFVVLRQMLEG 171
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
PEV+ELH + A VP+M+FKF+G+ +D Y +L + E + +L+N D + R
Sbjct: 172 RPEVSELHSIEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWR 231
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
L+G R QI++LVP ++ F+ LRC++ WA++RG+ ++ GF GI+ A+L A +C+
Sbjct: 232 CLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIHLAILAAYVCRR 291
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPV------LLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
+PNA + L+S FF ++ W WP PV +LC +G LM
Sbjct: 292 HPNASINTLLSLFFDIFVHWPWPLPVSLLDPPVLCGGPDGC----------------SLM 335
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
PI+ P P S + + ST + +E +RG+ + + + D DW LF PF + Y
Sbjct: 336 PIMLPCIPPEFCSSSTTESTFSKIKEELRRGYAL--SKDTRSTDSDWSWLFAPFPYGARY 393
Query: 364 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
K +LRI +SA D+LR+W GWV+SR R L LK+E + C P P D +
Sbjct: 394 KCFLRIVLSAPMEDELRDWVGWVKSRFRNLLLKLESLG---VYCDPDPSKQVDHT 445
>gi|261329513|emb|CBH12495.1| poly(A) polymerase, putative [Trypanosoma brucei gambiense DAL972]
Length = 687
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 203/389 (52%), Gaps = 24/389 (6%)
Query: 42 ESQEEAVSREEVLGRLDQIVKIWVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPG 100
E +EEA R VL ++ IV+ W++ A+ + + + +IF GSYR VHG G
Sbjct: 39 EPEEEANRRRSVLEHINCIVRAWIRSTMIAEFRMPAEAAAQVEGRIFATGSYRYNVHGSG 98
Query: 101 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 160
+DID + + P TRE FF L L+ +TELH + DA VP++ G+ IDL +
Sbjct: 99 SDIDIVLIAPNRITREH-FFNTLAPRLSHESRITELHCIRDARVPLIAMVADGIDIDLSF 157
Query: 161 ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 220
+ +PE + D +LQ D+Q+V S N RV I+ L P +FR LR ++ W
Sbjct: 158 GSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLAPHKASFRQALRFIKAW 214
Query: 221 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP------ 274
K RG+YSN GF GI WA+LVA +CQ +PN + +V RFFR+Y W PNP
Sbjct: 215 GKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRE 274
Query: 275 ---VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 330
+ L L + WDPR + D L P++TPA P N+ YNV+ + LR + DE
Sbjct: 275 NRAIYLTETMRVKTNLGRGWDPRESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDE 334
Query: 331 FQRGHEICEA-----MEKNEADVD----WDTLFEPFTFFEAYKNYLRIDISAENADDLRN 381
F RGHEIC + +E+ + + W + EP FF YK YL + ++ +A+ +
Sbjct: 335 FARGHEICSSYIGMGVEETKMKLGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQG 394
Query: 382 WKGWVESRLRQLTLKIERHTYNMLQCHPH 410
+ VES++R L L+ PH
Sbjct: 395 YVDAVESKIRFLWAGTAESRAQSLESFPH 423
>gi|401418000|ref|XP_003873492.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489722|emb|CBZ24982.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 706
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 219/429 (51%), Gaps = 34/429 (7%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK--ISRAK 72
+S GP +++ L ++ + E +EE+ R VL R+ +V++W++ I+ +
Sbjct: 17 VSADGPKGGEVVHDVSLSEWC--ITRIEPEEESNRRRSVLERIVNVVRVWIRHTMITEFR 74
Query: 73 GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 132
+ + + +IF GSYR VH G+DID + + P TRE FF L L P
Sbjct: 75 -MPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITREH-FFNTLAPRLKGEPW 132
Query: 133 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 192
VTELH + ++ VP++ G+ IDL + + +PE + D +LQ DEQ+V S N
Sbjct: 133 VTELHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSCN 189
Query: 193 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 252
RV I+ LVP FR TLR ++ W K R +YSN GF GI WA+L A +CQ YPN
Sbjct: 190 AVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYPN 249
Query: 253 AVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHL 302
+ +++RFFR Y W PNP + L L + WDPR + D L
Sbjct: 250 QNAAGMITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMAL 309
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD------WDTL 353
P++TPA P N+ YNV+ + LR + DEFQRGH++ M EA W +
Sbjct: 310 FPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRV 369
Query: 354 FEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL---TLKIERHT---YNMLQC 407
EP FF +++YL+I +S +A+ + + VESR+R L HT Y L+
Sbjct: 370 LEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTLEDYRQLRL 429
Query: 408 HPHPGDFSD 416
H +P F D
Sbjct: 430 HLNPHRFED 438
>gi|440487552|gb|ELQ67335.1| Poly(A) polymerase pla1 [Magnaporthe oryzae P131]
Length = 484
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 190/272 (69%), Gaps = 6/272 (2%)
Query: 133 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNADEQTVR 189
+T+L V DA VP++KF+FSG+SIDL+++R+ ++ +P D ++S ++L+ DE+ +R
Sbjct: 7 ITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGLDEKELR 66
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
S+NG RVTD+I+ LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ WA+LVAR+CQL
Sbjct: 67 SVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLVARVCQL 126
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
YP A S++V++FF + +W WP PVLL AIE+G L ++W+P+ P D+YHLMPIITPA
Sbjct: 127 YPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPA 186
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLR 368
YP M +++N++ S+ ++ E + ++ + + + W LF+ TFF + +K Y++
Sbjct: 187 YPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGK--LPWKDLFQKHTFFTKDFKYYIQ 244
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERH 400
+ ++++ + + W G+VES++R L +ERH
Sbjct: 245 VIAASKDKESHKLWSGFVESKVRLLVQGLERH 276
>gi|146081651|ref|XP_001464305.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|398012599|ref|XP_003859493.1| poly(A) polymerase, putative [Leishmania donovani]
gi|134068396|emb|CAM66686.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|322497708|emb|CBZ32784.1| poly(A) polymerase, putative [Leishmania donovani]
Length = 709
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 217/428 (50%), Gaps = 32/428 (7%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAK-G 73
+S GP +++ L ++ + E +EE+ R VL R+ +V++W++ +
Sbjct: 17 VSADGPRGGEVVHDVSLSEWC--ITRIEPEEESNRRRSVLERIVNVVRVWIRHTMITEFR 74
Query: 74 LNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 133
+ + + +IF GSYR VH G+DID + + P TRE FF L L P V
Sbjct: 75 MPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITREH-FFNTLAPRLKSEPWV 133
Query: 134 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG 193
T+LH + ++ VP++ G+ IDL + + +PE + D +LQ DEQ+V S N
Sbjct: 134 TDLHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSCNA 190
Query: 194 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 253
RV I+ LVP FR TLR ++ W K R +YSN GF GI WA+L A +CQ YPN
Sbjct: 191 VRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYPNQ 250
Query: 254 VPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLM 303
+ +V+RFFR Y W PNP + L L + WDPR + D L
Sbjct: 251 NAAGMVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMALF 310
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD------WDTLF 354
P++TPA P N+ YNV+ + LR + DEFQRGH++ M EA W +
Sbjct: 311 PVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVL 370
Query: 355 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL---TLKIERHT---YNMLQCH 408
EP FF +++YL+I +S +A+ + + VESR+R L HT Y L+ H
Sbjct: 371 EPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTLEDYRQLRLH 430
Query: 409 PHPGDFSD 416
+P F D
Sbjct: 431 LNPRRFED 438
>gi|157866653|ref|XP_001687718.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
gi|68125332|emb|CAJ03188.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
Length = 700
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 219/429 (51%), Gaps = 34/429 (7%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKK--ISRAK 72
+S GP +++ L ++ + E +EE+ R VL R+ +V++W++ I+ +
Sbjct: 17 VSADGPKGGEVVHELSLSEWC--ITRIEPEEESNRRRSVLERIVNVVRVWIRHTMITEFR 74
Query: 73 GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 132
+ + + +IF GSYR VH G+DID + + P TRE FF L L P
Sbjct: 75 -MPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITREH-FFNTLAPRLKSEPW 132
Query: 133 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 192
VT+LH + ++ VP++ G+ IDL + + +PE + D +LQ DEQ+V S N
Sbjct: 133 VTDLHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSCN 189
Query: 193 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 252
RV I+ LVP FR TLR ++ W K R +YSN GF GI WA+L A +CQ YPN
Sbjct: 190 AVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYPN 249
Query: 253 AVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHL 302
+ +V+RFFR Y W PNP + L L + WDPR + D L
Sbjct: 250 QNAAGMVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMAL 309
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD------WDTL 353
P++TPA P N+ YNV+ + LR + DEFQRGH++ M EA W +
Sbjct: 310 FPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRV 369
Query: 354 FEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL---TLKIERHT---YNMLQC 407
EP FF +++YL+I +S +A+ + + VESR+R L HT Y L+
Sbjct: 370 LEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTLEDYRQLRL 429
Query: 408 HPHPGDFSD 416
H +P F D
Sbjct: 430 HLNPRRFED 438
>gi|154334339|ref|XP_001563421.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060437|emb|CAM37605.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 709
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 217/428 (50%), Gaps = 32/428 (7%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAK-G 73
+S GP +++ L ++ + E +EE+ R VL R+ +V++W++ A+
Sbjct: 17 VSADGPKGGEVVHDVSLGEWC--ITRIEPEEESNRRRSVLERIVNVVRVWIRHTMIAEFR 74
Query: 74 LNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 133
+ + + +IF GSYR VH G+DID + + P TRE FF L L P V
Sbjct: 75 MPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITREH-FFNTLAPRLKGEPWV 133
Query: 134 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG 193
TELH + ++ VP++ G+ IDL + + +PE + D +LQ DEQ+V S N
Sbjct: 134 TELHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSCNA 190
Query: 194 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 253
RV I+ LVP FR LR ++ W K R +YSN GF GI WA+L A +CQ YPN
Sbjct: 191 VRVAHNIMDLVPNKAVFRQALRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYPNQ 250
Query: 254 VPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLM 303
+ +++RFFR Y W PNP + L L + WDPR + D L
Sbjct: 251 NAAGMITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMALF 310
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD------WDTLF 354
P++TPA P N+ YNV+ + LR + DEFQRGH++ M EA+ W +
Sbjct: 311 PVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSNDLGMSAVEAEAKFGPFGVWSRVL 370
Query: 355 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL---TLKIERHT---YNMLQCH 408
EP FF +++YL I +S +A+ + + VESR+R L HT Y L+ H
Sbjct: 371 EPAPFFGKFRHYLHIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTLEDYRQLRLH 430
Query: 409 PHPGDFSD 416
+P F D
Sbjct: 431 LNPRRFED 438
>gi|116207486|ref|XP_001229552.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
gi|88183633|gb|EAQ91101.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
Length = 592
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 198/293 (67%), Gaps = 10/293 (3%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS PT+ + L + LR +ES +E R+EVL +L++I ++V++ +
Sbjct: 7 GVTPPISTTLPTEPEKRLNHALHQELRAQGTFESPQETEKRKEVLRQLEKITTVFVQRAA 66
Query: 70 RAK-GLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
K N ++++A ++FT+GSYRLGV+GPG+D+DTL V P++ T E+ +F ++L
Sbjct: 67 AQKEPKNTFMIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQ-YFEIFPEVLV 125
Query: 129 EMPE---VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQN 182
EM +T+L PVP+A VP++KF+FSG+SIDL++ + +L +P++ + ++ +++L+
Sbjct: 126 EMAPPGAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPDEKNWSLADNNLLRG 185
Query: 183 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
E VRSLNG RVTD IL LVP+ F+ LR ++ WA+R+ +Y+N+ G+ GG+ WA+L
Sbjct: 186 LSENEVRSLNGTRVTDDILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAML 245
Query: 243 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPR 293
VAR+CQLYP A +++V++FF + +W WP PVLL IE GS + VW+P+
Sbjct: 246 VARVCQLYPKATSAVVVNKFFHIMFKWPWPLPVLLKDIEYGSPVTRVPVWNPK 298
>gi|407396778|gb|EKF27540.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 645
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 233/511 (45%), Gaps = 79/511 (15%)
Query: 42 ESQEEAVSREEVLGRLDQIVKIWVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPG 100
E +EEA R VL ++ IV+ W++ + + + + +IF GSYR VH G
Sbjct: 39 EPEEEANRRRSVLEHINNIVRAWIRSTMITEFRMPAEAATQVEGRIFATGSYRYNVHASG 98
Query: 101 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 160
+DID + + P TRE FF L L P +TELH + DA VP++ G+ IDL +
Sbjct: 99 SDIDIVLIAPNRITREH-FFNTLAPRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSF 157
Query: 161 ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 220
+ +PE + D +LQ D+Q+V S N RV I+ LVP +FR LR ++ W
Sbjct: 158 GSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAW 214
Query: 221 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP------ 274
K RG+YSN GF GI WA+LVA +CQ +PN + +V RFFR+Y W PNP
Sbjct: 215 GKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRE 274
Query: 275 ---VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 330
+ L L + WDPR + D L P++TPA P N+ +NV+ + LR + E
Sbjct: 275 NRAIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCAE 334
Query: 331 FQRGHEIC---------EAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 381
F RGHEIC EA + W L EP FF YK YL + +S +A+ +
Sbjct: 335 FARGHEICSSSLVASAEEAKSRFGPHGIWSRLLEPVKFFGNYKYYLHVLVSCTDAEAYQG 394
Query: 382 WKGWVESRLRQL----------TLKIERHTYNMLQ------------------------- 406
+ VES++R L L+ RH L
Sbjct: 395 YVDAVESKIRFLWAGTAESRGYALENVRHVRIQLNPRRYEAPEEVETRARLLKKTSRSSG 454
Query: 407 ---------CHPHPGDFSDKSKP--LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQA 455
H G D S P C YF+G+ P G + D+ +++ F
Sbjct: 455 GGNGSMEVSSHQTSGAMDDSSAPKIFSCHYFIGMSVDPKAPSG---KIDLAPSIRAFHGI 511
Query: 456 VSMYTLRKPGMQ----ISVAHVTRRNLPNFV 482
V K G+ I+V +++ +P FV
Sbjct: 512 VRQLRQYKEGITRLPVITVEDISK--IPAFV 540
>gi|297722067|ref|NP_001173397.1| Os03g0313200 [Oryza sativa Japonica Group]
gi|255674459|dbj|BAH92125.1| Os03g0313200 [Oryza sativa Japonica Group]
Length = 431
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 211/357 (59%), Gaps = 23/357 (6%)
Query: 64 WVKKISRAKGLNDQLLQEAN--AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
W K+++ DQ Q N A + TFGSY LG +GP +DID +CVGP A+ + FF
Sbjct: 3 WAKRVAY-----DQREQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFI 57
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
L QML E PEV++LH + +A VP+M+FKF+G+ +D Y +L + E + +L
Sbjct: 58 VLRQMLEERPEVSDLHSIENAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLA 117
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
+E + R L+G RV QI++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+
Sbjct: 118 AVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAI 177
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
L A +C ++P+A S L + FF +++ W WP PV L +++ + W P
Sbjct: 178 LAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQPT----PWRPH-----CCS 226
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPI+ P P + +++ ST + +E QRG + + ++N D++W LF PF +
Sbjct: 227 FMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTV 284
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
YK++LRI +SA A++LR+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 285 RYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 338
>gi|301100486|ref|XP_002899333.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262104250|gb|EEY62302.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 990
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 198/306 (64%), Gaps = 1/306 (0%)
Query: 34 YLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYR 93
Y+ ++ ++ E + + +VL +L ++ WVK++ R + L+++ + +F GSYR
Sbjct: 430 YVDGISPTDAPEARMHKLQVLKQLSDLLTKWVKRVGRERELSEEHITLTKGSLFLAGSYR 489
Query: 94 LGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSG 153
LG+ P +DID +CV P H T +DFFG Q+L + P V+ L PV A+VP++ F G
Sbjct: 490 LGLDDPNSDIDAVCVAPWHVT-HDDFFGSFCQLLAQTPGVSHLAPVRSAYVPLISLSFLG 548
Query: 154 VSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 213
V +DLL++RL + + + +I D +L E ++++LN RV+ +L LVP+ + +R
Sbjct: 549 VRMDLLFSRLPMSSVESNQNIDSDHMLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIV 608
Query: 214 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN 273
LR +R WA+RRG+YS G+LGGI+WA+LVA +CQLYPNA P+ + RFF+V ++W+WP
Sbjct: 609 LRAVRAWARRRGIYSAKLGYLGGISWAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQ 668
Query: 274 PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 333
PV+L I + LG +WDPR++ D+ H+MPIITPAYP MNSS VS S+ ++ +E R
Sbjct: 669 PVMLNMIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPHMNSSVQVSQSSFSVIYEELWR 728
Query: 334 GHEICE 339
+ E
Sbjct: 729 ARYLAE 734
>gi|342182011|emb|CCC91490.1| putative poly(A) polymerase [Trypanosoma congolense IL3000]
Length = 677
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 199/389 (51%), Gaps = 24/389 (6%)
Query: 42 ESQEEAVSREEVLGRLDQIVKIWVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPG 100
E +EEA R VL ++ IV+ W++ + + + + +IF GSYR VHG G
Sbjct: 39 EPEEEANRRRSVLEHINCIVRAWIRSTMITEFRMPAEAAAQVEGRIFATGSYRYNVHGSG 98
Query: 101 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 160
+DID + + P TRE FF L L+ P +T+LH + DA VP++ G+ IDL +
Sbjct: 99 SDIDIVLIAPNRITREH-FFNTLAPRLSHEPRITKLHCIRDARVPLIAMVADGIDIDLSF 157
Query: 161 ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 220
+ +PE + D +LQ D+Q+V S N RV I+ LVP +FR LR ++ W
Sbjct: 158 GSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAW 214
Query: 221 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP------ 274
K RG+YSN GF GI WA+LVA +CQ +PN + +V RFFR+Y W PNP
Sbjct: 215 GKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRFFRIYHAWFSPNPQGSGKE 274
Query: 275 ---VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 330
+ L L + WDPR + D L P++TPA P N+ +NV+ + LR + E
Sbjct: 275 NRAIYLTETMRVKTNLGRCWDPRESKSDALALFPVLTPAVPYGNACFNVTMTNLRQLCAE 334
Query: 331 FQRGHEIC---------EAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 381
F RGH IC E EK W + EP FF YK Y+ + ++ +A+ +
Sbjct: 335 FSRGHNICSSCIGMNVNETKEKFGPHGLWSKILEPVKFFGEYKYYMHVQVTCSDAELYQG 394
Query: 382 WKGWVESRLRQLTLKIERHTYNMLQCHPH 410
+ VES++R L ++ PH
Sbjct: 395 YVEAVESKIRFLWAGTAESRAQSIESFPH 423
>gi|58220771|gb|AAW68017.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 431
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 211/357 (59%), Gaps = 23/357 (6%)
Query: 64 WVKKISRAKGLNDQLLQEAN--AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
W K+++ DQ Q N A + TFGSY LG +GP +DID +CVGP A+ + FF
Sbjct: 3 WAKRVAY-----DQREQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFI 57
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
L QML E PEV++LH + +A VP+M+FKF+G+ +D Y +L + E + +L
Sbjct: 58 VLRQMLEERPEVSDLHSIENAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLA 117
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
+E + R L+G RV QI++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+
Sbjct: 118 VVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAI 177
Query: 242 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 301
L A +C ++P+A S L + FF +++ W WP PV L +++ + W P
Sbjct: 178 LAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQPT----PWRPH-----CCS 226
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPI+ P P + +++ ST + +E QRG + + ++N D++W LF PF +
Sbjct: 227 FMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTV 284
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
YK++LRI +SA A++LR+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 285 RYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 338
>gi|9453842|dbj|BAB03277.1| poly A polymerase [Drosophila melanogaster]
Length = 255
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 163/236 (69%), Gaps = 1/236 (0%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+ +V
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
K WVK+IS +K + + ++ KI+TFGSYRLGVH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 122 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 181
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 182 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 237
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
>gi|71419820|ref|XP_811284.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70875931|gb|EAN89433.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 645
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 194/372 (52%), Gaps = 24/372 (6%)
Query: 42 ESQEEAVSREEVLGRLDQIVKIWVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPG 100
E +EEA R VL ++ IV+ W++ + + + + +IF GSYR VH G
Sbjct: 39 EPEEEANRRRSVLEHINNIVRAWIRSTMITEFRMPAEAATQVEGRIFATGSYRYNVHASG 98
Query: 101 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 160
+DID + + P TRE FF L L P +TELH + DA VP++ G+ IDL +
Sbjct: 99 SDIDIVLIAPNRITREH-FFNTLAPRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSF 157
Query: 161 ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 220
+ +PE + D +LQ D+Q+V S N RV I+ LVP +FR LR ++ W
Sbjct: 158 GSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAW 214
Query: 221 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP------ 274
K RG+YSN GF GI WA+LVA +CQ +PN + +V RFFR+Y W PNP
Sbjct: 215 GKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRE 274
Query: 275 ---VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 330
+ L L + WDPR + D L P++TPA P N+ +NV+ + LR + E
Sbjct: 275 NRAIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTE 334
Query: 331 FQRGHEIC---------EAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 381
F RGHEIC EA + W L EP FF +K YL + +S +A+ +
Sbjct: 335 FARGHEICSSSLVTSAEEAKSRFGPHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQG 394
Query: 382 WKGWVESRLRQL 393
+ VESR+R L
Sbjct: 395 YVDAVESRIRFL 406
>gi|407832565|gb|EKF98495.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 645
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/511 (31%), Positives = 233/511 (45%), Gaps = 79/511 (15%)
Query: 42 ESQEEAVSREEVLGRLDQIVKIWVKKISRAK-GLNDQLLQEANAKIFTFGSYRLGVHGPG 100
E +EEA R VL ++ IV+ W++ + + + + +IF GSYR VH G
Sbjct: 39 EPEEEANRRRSVLEHINNIVRAWIRSTMITEFRMPAEAATQVEGRIFATGSYRYNVHASG 98
Query: 101 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 160
+DID + + P TRE FF L L P +TELH + DA VP++ G+ IDL +
Sbjct: 99 SDIDIVLIAPNRITREH-FFNTLAPRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSF 157
Query: 161 ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 220
+ +PE + D +LQ D+Q+V S N RV I+ LVP +FR LR ++ W
Sbjct: 158 GSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAW 214
Query: 221 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP------ 274
K RG+YSN GF GI WA+LVA +CQ +PN + +V RFFR+Y W PNP
Sbjct: 215 GKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRE 274
Query: 275 ---VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 330
+ L L + WDPR + D L P++TPA P N+ +NV+ + LR + E
Sbjct: 275 NRAIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTE 334
Query: 331 FQRGHEIC---------EAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 381
F RGHEIC EA + W L EP FF +K YL + +S +A+ +
Sbjct: 335 FARGHEICSSSLVTSAEEAKSRFGPHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQG 394
Query: 382 ------------WKGWVESR------LRQLTLKIERHTYNM------------------- 404
W G ESR +R + +++ Y
Sbjct: 395 YVDAVESKIRFLWAGTAESRGYALENIRHVRIRLNPRRYEAPEEVETRARLLKKTSRSSG 454
Query: 405 -------LQCHPHPGDFSDKSKP--LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQA 455
+ H G D S P C YF+G+ P G + D+ +++ F
Sbjct: 455 GGNGSMEVSSHQTSGAVDDSSAPKIFSCHYFIGMSVDPKAPSG---KIDLAPSIRAFHGI 511
Query: 456 VSMYTLRKPGMQ----ISVAHVTRRNLPNFV 482
V K G+ I+V +++ +P FV
Sbjct: 512 VRQLRQYKEGITRLPVITVEDISK--IPVFV 540
>gi|326508888|dbj|BAJ86837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 211/379 (55%), Gaps = 24/379 (6%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEAN 83
D RT L ++L D + EE +RE V+ L +IV W K ++ + + +
Sbjct: 74 DYRRTHSLIQFLTDEGAIPTPEEEETRELVIRELKKIVTDWAKGVASEERVPPR---RVT 130
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 143
A + T+GSY LG HGP +DID LCVGP A FF L Q+L PEV+ L V +A
Sbjct: 131 ATVLTYGSYTLGAHGPESDIDALCVGPCIANLPHHFFVVLRQILKCRPEVSGLQTVENAK 190
Query: 144 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
VP+M+F+FSG+S+DL YA+L + + ++ S L+ D ++ +SL+G RV +QI++L
Sbjct: 191 VPLMRFRFSGISVDLTYAQLPVLDAVQAINTSSPQYLRRLDSRSWKSLSGVRVNEQIVQL 250
Query: 204 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 263
VP + F+ LRC++ WA+RRG++ ++ G GI+ A+L A +CQ +PNA + L + FF
Sbjct: 251 VPNQEKFQILLRCIKLWARRRGLHCHLLGSFAGIHLAILAAYVCQRFPNATANGLFTMFF 310
Query: 264 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH----LMPIITPAYPCMNSSYNV 319
++ W W PV D P + H LMPI+ P P + N+
Sbjct: 311 GIFAHWPWHIPV---------------DLHGQPTNCRHSDGCLMPIVMPCTPPELCASNM 355
Query: 320 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDL 379
+ T R + +E RG+ + + + + D +W +FEPF + Y +LRI + A +++L
Sbjct: 356 TEGTFRKIREELMRGYVLTKDLGSH--DFEWAWIFEPFPYSTTYGQFLRIALCAPTSEEL 413
Query: 380 RNWKGWVESRLRQLTLKIE 398
+W GWV+SR L LK+E
Sbjct: 414 HDWIGWVKSRFPYLILKLE 432
>gi|340054738|emb|CCC49040.1| putative poly(A) polymerase [Trypanosoma vivax Y486]
Length = 671
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 202/391 (51%), Gaps = 28/391 (7%)
Query: 42 ESQEEAVSREEVLGRLDQIVKIWVKK--ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGP 99
E +EEA R VL L+ IV+ W++ I+ + + + + +IF GSYR VH
Sbjct: 39 EPEEEANRRRSVLEHLNCIVRAWIRSTMITEFR-MPAEAAAQVEGRIFATGSYRYNVHAS 97
Query: 100 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 159
G+DID + + P TRE FF L L+ VTELH + DA VP++ G+ IDL
Sbjct: 98 GSDIDIVLIAPNRITREH-FFDTLAPRLSHEARVTELHCIRDARVPLIAMVVDGIDIDLS 156
Query: 160 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 219
+ + +PE + D +L+ D+Q+V S N RV I+ LVP +FR LR ++
Sbjct: 157 FGSIRQDRVPE---VITDDLLRGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKA 213
Query: 220 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP----- 274
W K RG+YSN GF GI WA+LVA + Q +PN + +V RFFR+Y W PNP
Sbjct: 214 WGKARGIYSNTFGFPSGIGWAILVAFVSQCHPNQNAAGMVVRFFRIYHSWFSPNPHESGK 273
Query: 275 ----VLLCAIE--EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 328
+ L + SLG + WDPR + D L P++TPA P N+ YNV+ + LR +
Sbjct: 274 ENRAIYLTETMRVKTSLG-RCWDPRESKSDALALFPVLTPAVPYGNACYNVTITNLRQLC 332
Query: 329 DEFQRGHEICEA---MEKNEADVD------WDTLFEPFTFFEAYKNYLRIDISAENADDL 379
EF RGHEIC + M N+ W+ + EP F Y+ YL I I+ + +
Sbjct: 333 SEFARGHEICSSCIGMSVNDTRTKFGKYGLWNKILEPVKVFGEYRYYLHIQITCTDPEAY 392
Query: 380 RNWKGWVESRLRQLTLKIERHTYNMLQCHPH 410
+ + VES++R L L+ + H
Sbjct: 393 QGYVDAVESKIRFLWAGTAESRAQSLESYKH 423
>gi|226498102|ref|NP_001142239.1| uncharacterized protein LOC100274408 [Zea mays]
gi|194707762|gb|ACF87965.1| unknown [Zea mays]
Length = 430
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 197/352 (55%), Gaps = 37/352 (10%)
Query: 82 ANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 141
A A + T+GSY LG HGP +DID LC+GP AT + FF L Q+L PEV+E+H V
Sbjct: 18 ATATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEK 77
Query: 142 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 201
A VP+M+F+F+G+++DL YA+L + + ++ +LQ D ++ RSL+G RV +QI+
Sbjct: 78 AKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIV 137
Query: 202 RLVP---------KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 252
+LVP +Q F+T LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+
Sbjct: 138 QLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPD 197
Query: 253 AVPSMLVSRFFRVYTQWRWPNPVLL------CAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
A S L + FF+ + W W PV L C EG LMPI+
Sbjct: 198 ASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEG-----------------RLMPIV 240
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
P P + V+ +L+ + +E RG+ + + D W LFEPF + + Y+ +
Sbjct: 241 MPCTPLEFCASTVTKGSLKKIREELTRGYVLTR--DPLRHDFQWSWLFEPFPYDQKYQQF 298
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
LRI + A +L +W GWV+SR R L LK+ER ++C P P + D +
Sbjct: 299 LRIALRAPTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHT 347
>gi|426246819|ref|XP_004017185.1| PREDICTED: poly(A) polymerase alpha-like, partial [Ovis aries]
Length = 244
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/201 (58%), Positives = 148/201 (73%), Gaps = 2/201 (0%)
Query: 78 LLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH 137
+++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L EV +L
Sbjct: 18 VIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLR 76
Query: 138 PVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 197
V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVT
Sbjct: 77 AVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVT 136
Query: 198 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 257
D+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S
Sbjct: 137 DEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIAST 196
Query: 258 LVSRFFRVYTQWRW-PNPVLL 277
LV +FF V+++W+W P PVLL
Sbjct: 197 LVHKFFLVFSKWQWHPTPVLL 217
>gi|414888168|tpg|DAA64182.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 430
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 197/352 (55%), Gaps = 37/352 (10%)
Query: 82 ANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 141
A A + T+GSY LG HGP +DID LC+GP AT + FF L Q+L PEV+E+H V
Sbjct: 18 ATATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEK 77
Query: 142 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 201
A VP+M+F+F+G+++DL YA+L + + ++ +LQ D ++ RSL+G RV +QI+
Sbjct: 78 AKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIV 137
Query: 202 RLVP---------KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 252
+LVP +Q F+T LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+
Sbjct: 138 QLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPD 197
Query: 253 AVPSMLVSRFFRVYTQWRWPNPVLL------CAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
A S L + FF+ + W W PV L C EG LMPI+
Sbjct: 198 ASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEG-----------------RLMPIV 240
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
P P + V+ +L+ + +E RG+ + + D W LFEPF + + Y+ +
Sbjct: 241 MPCTPPEFCASTVTKGSLKKIREELTRGYVLTR--DPLRHDFQWSWLFEPFPYDQKYQQF 298
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
LRI + A +L +W GWV+SR R L LK+ER ++C P P + D +
Sbjct: 299 LRIALRAPTIAELGDWAGWVKSRFRFLILKLER---AGIECDPCPSEEVDHT 347
>gi|413936469|gb|AFW71020.1| hypothetical protein ZEAMMB73_643504 [Zea mays]
Length = 388
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 113/165 (68%), Positives = 132/165 (80%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+TEPISL+GPT+ LM+T ++EKYL D LYE Q+EA+ REEVLG+LDQ VK W+KK +
Sbjct: 149 GVTEPISLSGPTEKYLMQTDEVEKYLSDARLYERQDEAILREEVLGKLDQTVKAWIKKAT 208
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
R G +Q + EANAK FTFGSY LGVHGP ADIDTLCVGPRHATR E FF LH +L E
Sbjct: 209 RINGYGEQFVHEANAKTFTFGSYCLGVHGPDADIDTLCVGPRHATRNEYFFRWLHDILAE 268
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDI 174
MPEV+ELHPVPDAHVPV+ FK +GVSIDLLYA L+ VIPE +I
Sbjct: 269 MPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPESREI 313
>gi|222624807|gb|EEE58939.1| hypothetical protein OsJ_10608 [Oryza sativa Japonica Group]
Length = 519
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/403 (34%), Positives = 217/403 (53%), Gaps = 50/403 (12%)
Query: 18 AGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQ 77
A D R++ L ++ + S EE + R+ V+ LD+IV W K+++ DQ
Sbjct: 72 AAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVA-----YDQ 126
Query: 78 LLQEAN--AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTE 135
Q N A + TFGSY LG +GP +DID +CVGP A+ + FF L QML E PEV++
Sbjct: 127 REQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSD 186
Query: 136 LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR 195
LH + +A +I RL L +E + R L+G R
Sbjct: 187 LHSIENAK-----------AIHAFDPRL----------------LAAVNEPSWRCLSGVR 219
Query: 196 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP 255
V QI++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A +C ++P+A
Sbjct: 220 VNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATL 279
Query: 256 SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 315
S L + FF +++ W WP PV L +++ + W P MPI+ P P
Sbjct: 280 SSLFNSFFDIFSHWHWPLPVSL--LDQPT----PWRPH-----CCSFMPIVMPCSPPEFC 328
Query: 316 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN 375
+ +++ ST + +E QRG + + ++N D++W LF PF + YK++LRI +SA
Sbjct: 329 ASSITRSTFNKIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKHFLRIVLSAPV 386
Query: 376 ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
A++LR+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 387 AEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 426
>gi|218192685|gb|EEC75112.1| hypothetical protein OsI_11288 [Oryza sativa Indica Group]
Length = 519
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/403 (34%), Positives = 216/403 (53%), Gaps = 50/403 (12%)
Query: 18 AGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQ 77
A D R++ L ++ + S EE + R+ V+ LD+IV W K+++ DQ
Sbjct: 72 AAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVA-----YDQ 126
Query: 78 LLQEAN--AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTE 135
Q N A + TFGSY LG +GP +DID +CVGP A+ + FF L QML E PEV++
Sbjct: 127 REQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSD 186
Query: 136 LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR 195
LH + +A +I RL L +E + R L+G R
Sbjct: 187 LHSIENAK-----------AIHAFDPRL----------------LAVVNEPSWRCLSGVR 219
Query: 196 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP 255
V QI++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A +C ++P+A
Sbjct: 220 VNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATL 279
Query: 256 SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 315
S L + FF +++ W WP PV L ++ + W P MPI+ P P
Sbjct: 280 SSLFNSFFDIFSHWHWPLPVSL--FDQPT----PWRPH-----CCSFMPIVMPCSPPEFC 328
Query: 316 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN 375
+ +++ ST + +E QRG + + ++N D++W LF PF + YK++LRI +SA
Sbjct: 329 ASSITRSTFNKIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKHFLRIVLSAPV 386
Query: 376 ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
A++LR+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 387 AEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 426
>gi|391331065|ref|XP_003739971.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 493
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 204/346 (58%), Gaps = 16/346 (4%)
Query: 28 TRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIF 87
T L + L YE + R EV+ R+ ++ W+ + +KGL + L ++
Sbjct: 35 THSLRQLLYQQKQYECERRVSERHEVINRMLSFLRAWLFSMMESKGLREALNSMPTFRLR 94
Query: 88 TFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP-EVTELHPVPDAHVPV 146
FGS RLGV +DID V PR TREE FF +ML + E+T+L +P A+VPV
Sbjct: 95 QFGSLRLGVQDFYSDIDLCFVAPRWVTREE-FFTGFPRMLEQYSHEITKLSVLPSAYVPV 153
Query: 147 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN--ADEQTVRSLNGCRVTDQILRLV 204
++ + +D+++AR + I +LD+ + +++ +D + VRSLNG RVT+ +LR V
Sbjct: 154 IRATCHDIQVDIVFARTEVDEISRELDLLAGANIESLISDIRCVRSLNGYRVTEMVLRFV 213
Query: 205 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 264
P+ + F+ L+ +R+WAK + +YS+ G+LGG++WA+LVA++C ++P A + ++++FF
Sbjct: 214 PRYRVFQLALKAIRYWAKCQKIYSHTLGYLGGVSWAILVAKVCTMFPKAGAARILNKFFL 273
Query: 265 VYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 323
V +QWRWP PV+L + EG + Q+W + P D +MPIITP YP NSS+NVS ST
Sbjct: 274 VMSQWRWPEPVML--LPEGYGVSSQLWSITQMPWD---IMPIITPVYPQQNSSFNVSKST 328
Query: 324 LRIMMDEFQRGHEICE--AMEKNEADVDWDTLFEPFTFFEAYKNYL 367
L +M + G I + ME+ DW + F P + Y++Y+
Sbjct: 329 LLVMKNALTEGVRITDDILMER----CDWKSFFHPVHIADMYEHYV 370
>gi|218200293|gb|EEC82720.1| hypothetical protein OsI_27407 [Oryza sativa Indica Group]
Length = 455
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 200/375 (53%), Gaps = 43/375 (11%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEAN 83
D RT L ++L+D S E RE+V+ +L++IV W K ++ + + + A
Sbjct: 17 DSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRVPPR---RAT 73
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 143
A + T+GSY LG HGP +DID LCVGP AT + FF L Q+L + PEV+EL V A
Sbjct: 74 ATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVESA- 132
Query: 144 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
+ + S +LQ D ++ RSL+G RV +QI++L
Sbjct: 133 --------------------------KAIITSNPHLLQKLDSRSWRSLSGVRVNEQIVQL 166
Query: 204 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 263
VP Q F+ LRC++ WAKRRG++ ++ GF GI+ A+L A +CQ YP + L + FF
Sbjct: 167 VPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLFTIFF 226
Query: 264 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 323
++ W W PV SL Q + RR P + MPI+ P P + N++ T
Sbjct: 227 DIFAHWNWQIPV--------SLHGQPTNCRR-PDGSF--MPILLPCTPPEFCTSNMTKGT 275
Query: 324 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 383
+ + +E RG+ + + E D +W LF PF + Y+ +LRI + A +++LR+W
Sbjct: 276 FKKIREELMRGYALTK--EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWA 333
Query: 384 GWVESRLRQLTLKIE 398
GWV+SR R L LK+E
Sbjct: 334 GWVKSRFRNLILKLE 348
>gi|428168713|gb|EKX37654.1| hypothetical protein GUITHDRAFT_41551, partial [Guillardia theta
CCMP2712]
Length = 336
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/325 (38%), Positives = 183/325 (56%), Gaps = 16/325 (4%)
Query: 104 DTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL 163
D + + R+ R D F +L+ + ++ +L V +A PV+KF+ L ARL
Sbjct: 1 DAVMIVTRYIDRS-DMFDDLYVAMQAREDIKDLIKVQEARAPVIKFRMDDFEFKLSMARL 59
Query: 164 SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKR 223
+ +PED D++ D L+N D ++V SLN RVTD I LVP + +F+ ++ ++FWAK+
Sbjct: 60 NYATLPEDFDVTDDKHLKNVDPESVASLNSVRVTDTIRSLVPNLISFKYCIQALKFWAKK 119
Query: 224 RGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG 283
RGVY+N GFLG I+ ++ ARICQLYP A+PS L+ FF Y QW+WP PV L I
Sbjct: 120 RGVYNNGLGFLGSISLEIMAARICQLYPKALPSRLLYFFFFTYCQWKWPQPVELAEIVAN 179
Query: 284 S--LGLQVWDP-RRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA 340
S L L VW D+ HLMPII+P YP N++ VS STL+IM + F R +C+
Sbjct: 180 SHDLNLPVWGYGATEMSDRRHLMPIISPCYPAQNTAALVSRSTLKIMKEMFIRAMGVCKQ 239
Query: 341 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
+ + +A W LFEP F Y N+L+I SA + D WKG+ + + + +ER
Sbjct: 240 IHEGKA--GWCDLFEPVDLFSTYANFLQIQASARSKADHNMWKGFCAANIHNMISYLER- 296
Query: 401 TYNMLQCHPHPGDFSDKSKPLYCSY 425
C P + D++ P+ SY
Sbjct: 297 ------C---PDAYLDRAHPIQRSY 312
>gi|402468353|gb|EJW03519.1| hypothetical protein EDEG_00201 [Edhazardia aedis USNM 41457]
Length = 1051
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 229/442 (51%), Gaps = 91/442 (20%)
Query: 108 VGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV 167
+G H ++++ + ++T LH + DA+VP++KF+ + +SIDLL+ R+ L
Sbjct: 598 LGQEHTDKDKNLISGI--------KITNLHKIEDAYVPLIKFEINYISIDLLFTRVPL-P 648
Query: 168 IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVY 227
+L++ D++L+N D++++ S+NG RVTD ++ LVP ++ F + LR +++WAKRRG+Y
Sbjct: 649 SLSNLNLLDDTLLKNMDDKSILSINGSRVTDMLINLVPNVKVFHSALRAIKYWAKRRGIY 708
Query: 228 SNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGL 287
N G+ GG+ +A+LVARICQ YPN ++ +FF +Y+ W+WPNPVLL + + L
Sbjct: 709 GNSFGYPGGVAYAILVARICQYYPNKDSYTILYKFFEIYSNWKWPNPVLLKHNVDRNFNL 768
Query: 288 QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR-------------- 333
++WDP+ + D+ H MPIITPAYP + S++NV+ +TL ++ +E +R
Sbjct: 769 KIWDPKVHQTDRMHKMPIITPAYPSICSTHNVTNTTLGVINEELKRCLDIFKESKNIDSS 828
Query: 334 -------GHE-------------------ICEAMEKN-EADVDWD--------------- 351
GHE I E E N V WD
Sbjct: 829 FDETKIFGHESDINCASKQSIDPKSKKLKIGEDHENNINTKVKWDLNNLSFDNLKVFYEK 888
Query: 352 ------TLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT---- 401
LF+ FF+ YK YL I ++ ++ WKG++ES++R L K+E
Sbjct: 889 FYGLLKKLFQQSDFFKKYKFYLNIKLTNDDK-----WKGFIESKIRLLCAKLENSEGFSI 943
Query: 402 -YNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 460
Y M++ P P F + +F+GL K + + +I V +F + ++ +
Sbjct: 944 GY-MIKAVPFPQSFVYND---FVHFFVGLDYKDRIKI------NIDKPVNDFLRILNDWD 993
Query: 461 LRKPGMQISVAHVTRRNLPNFV 482
+ G +IS+ ++ + F+
Sbjct: 994 KKDEGSEISIKINKKKEIGEFL 1015
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 64/120 (53%), Gaps = 18/120 (15%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT P+S++G D+ +++ + +L N +E+ +++VSRE VLG L + + K
Sbjct: 8 GITGPLSMSGSKLIDMYKSQIINDFLVKSNFFEAHQDSVSRERVLGYLSFLADKFCK--- 64
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
KIFTFGSYRLGVH GADIDTL V T DFF +ML E
Sbjct: 65 --------------GKIFTFGSYRLGVHQKGADIDTLLVSASDVTL-IDFFNGFFEMLKE 109
>gi|82655167|emb|CAJ43765.1| poly(A) polymerase alpha [Oncorhynchus mykiss]
Length = 167
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 129/167 (77%)
Query: 142 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 201
A VPV+K F + ID+L+ARL+L IPE+LD+ D +L+N D + +RSLNGCRVTD+IL
Sbjct: 1 AVVPVIKLSFDSIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEIL 60
Query: 202 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 261
LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +
Sbjct: 61 HLVPNIENFRLTLRTIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVHK 120
Query: 262 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
FF V+++W WPNPVLL E+ +L L VW PR P D+YHLMPIITP
Sbjct: 121 FFLVFSKWEWPNPVLLKQPEDCNLNLPVWGPRVTPSDRYHLMPIITP 167
>gi|222637720|gb|EEE67852.1| hypothetical protein OsJ_25654 [Oryza sativa Japonica Group]
Length = 454
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 198/375 (52%), Gaps = 44/375 (11%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEAN 83
D RT L ++L+D S E RE+V+ +L++IV W K ++ + + + A
Sbjct: 17 DSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRVPPR---RAT 73
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 143
A + T+GSY LG HGP +DID LCVGP AT + FF L Q+L + PEV+EL V A
Sbjct: 74 ATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVESA- 132
Query: 144 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
+ + S +LQ D + RSL+G RV +QI++L
Sbjct: 133 --------------------------KAIITSNPHLLQKLDSLSWRSLSGVRVNEQIVQL 166
Query: 204 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 263
VP Q F+ LRC++ WAKRRG++ ++ GF GI+ A+L A +CQ YP + L + FF
Sbjct: 167 VPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLFTIFF 226
Query: 264 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 323
++ W W PV SL Q + RR P + MPI+ P P + N++ T
Sbjct: 227 DIFAHWNWQIPV--------SLHGQPTNCRR-PDGSF--MPILLPCTPPEFCTSNMTKGT 275
Query: 324 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 383
+ + +E RG+ + + E D +W LF PF + Y+ +LRI + A +++LR+W
Sbjct: 276 FKKIREELMRGYALTK--EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWA 333
Query: 384 GWVESRLRQLTLKIE 398
GWV+SR L LK+E
Sbjct: 334 GWVKSRF-NLILKLE 347
>gi|51900536|gb|AAU13916.1| PAP alpha [Candida dubliniensis]
Length = 360
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 203 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 262
LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQLYPNAV S++V +F
Sbjct: 1 LVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSVIVEKF 60
Query: 263 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 322
F +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++S
Sbjct: 61 FNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSS 120
Query: 323 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRN 381
T ++++ E RG I + + + W LFE FF YK YL + + ++A++ +
Sbjct: 121 TQKVILAELSRGSSIMQDIHAGKK--SWSDLFEKHCFFYKYKFYLCVVAATIDSAEEHKK 178
Query: 382 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
W G++ES+LRQL LK+E + HP+ DFS
Sbjct: 179 WSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFS 211
>gi|108707804|gb|ABF95599.1| Poly polymerase central domain containing protein, expressed [Oryza
sativa Japonica Group]
Length = 550
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/432 (32%), Positives = 216/432 (50%), Gaps = 77/432 (17%)
Query: 18 AGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQ 77
A D R++ L ++ + S EE + R+ V+ LD+IV W K+++ DQ
Sbjct: 72 AAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVA-----YDQ 126
Query: 78 LLQEAN--AKIFTFGSYRLG-----------------------VHGPGADIDTLCVGPRH 112
Q N A + TFGSY LG +GP +DID +CVGP
Sbjct: 127 REQYWNTTATVLTFGSYALGEFPFEIFNISYCDKRCLKCSALKAYGPESDIDAVCVGPCI 186
Query: 113 ATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL 172
A+ + FF L QML E PEV++LH + +A +I RL
Sbjct: 187 ASLQHHFFIVLRQMLEERPEVSDLHSIENAK-----------AIHAFDPRL--------- 226
Query: 173 DISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAG 232
L +E + R L+G RV QI++L+P I+ F+ LRC++ WA++RG++ ++ G
Sbjct: 227 -------LAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLG 279
Query: 233 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP 292
F GI+ A+L A +C ++P+A S L + FF +++ W WP PV L +++ + W P
Sbjct: 280 FFAGIHLAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQPT----PWRP 333
Query: 293 RRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE-----ICEAMEKNE-A 346
MPI+ P P + +++ ST + +E QRG +C + +
Sbjct: 334 H-----CCSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKLGVCTVEQGDRNG 388
Query: 347 DVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 406
D++W LF PF + YK++LRI +SA A++LR+W GWV+SR R L LK+E +
Sbjct: 389 DINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VD 445
Query: 407 CHPHPGDFSDKS 418
C P P + +D S
Sbjct: 446 CDPDPSEQADHS 457
>gi|145505515|ref|XP_001438724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405896|emb|CAK71327.1| unnamed protein product [Paramecium tetraurelia]
Length = 487
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 238/436 (54%), Gaps = 47/436 (10%)
Query: 36 RDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLG 95
+ +N ++ + ++++++ L Q + W+K L + QE ++ FGSYR G
Sbjct: 43 QSINFFDDEISKKTKDKLIEELRQNIIRWLK-------LYQSVEQEFAGELAVFGSYRFG 95
Query: 96 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 155
+G +DID + + P RE FF +L +L+ +VT L+ + +A VP+++FKF+G+
Sbjct: 96 ANGKDSDIDLIILAPPQIDRELHFFQQLPSILSSNSKVTNLYCIQEAMVPLIRFKFAGIQ 155
Query: 156 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 215
DL++A + + P +SQ DE++ RSLNG +V+D + + +++ + L+
Sbjct: 156 FDLVFACVKKIMKP----LSQSD---PVDEKSSRSLNGLKVSDYFSKYCHQ-KSYLSFLK 207
Query: 216 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN-P 274
++ WA RG+Y NV G+LGGI+W +L +I QLYPN L+ RFF +++QW+W P
Sbjct: 208 FIKAWAINRGIYGNVMGYLGGISWQILTHKIFQLYPNYSVQGLIERFFFIFSQWKWNELP 267
Query: 275 VLLCAIEEGSLGLQVWDPRRNP-----KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 329
V++ +E +W RN + ++++M I+TP YP +NS+YNVS T I+ +
Sbjct: 268 VVIQKCDE------IW---RNSLFEQQQKQHNVMSILTPVYPYINSAYNVSNCTFTIIEE 318
Query: 330 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 389
+ + + I + + +E + W L + FF+ Y YL+I ++N DDL WK +ES+
Sbjct: 319 QLKLANIIMQKICLSE--LQWSDLLKKIQFFDIYYTYLQIRALSKNKDDLIQWKSHIESK 376
Query: 390 LRQLTLKIERHTYN-MLQCHPHP---------GDFSDKSKPLYC---SYFMGLQRKQGVP 436
LR+L ++ N ++ H +P GD +D L+ S+F G++ K
Sbjct: 377 LRKLNKMLDEGDVNKAIEFHLYPKSFQTDYVQGDENDTPGSLFNFSESFFYGIRIKDEEL 436
Query: 437 VGEGEQFDIRLTVKEF 452
V E+ DI +++F
Sbjct: 437 V--KEKLDIENIIRQF 450
>gi|145546083|ref|XP_001458725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426546|emb|CAK91328.1| unnamed protein product [Paramecium tetraurelia]
Length = 550
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 251/474 (52%), Gaps = 39/474 (8%)
Query: 22 DDDLMRTR----KLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQ 77
D +LM + +L ++ +L +E +++ L QIVK W ++ ++ K +N+
Sbjct: 37 DQNLMHHQCNKGQLLSFIETDSLQAIEENQQKSKDIQAYLGQIVKRWSQQCAKEKRINED 96
Query: 78 LLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH 137
L+ +A + +GS LGV +DID +C+ P R E FF L +L+ + +++
Sbjct: 97 HLKYCSAVLLPYGSVLLGVADSKSDIDLICIAPEFIDRREQFFNGLFYLLSNEQGMEQIN 156
Query: 138 PVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN---ADEQTVRSLNGC 194
+ P++K + G ID+ +A+L+ +PE++D + D + +N ++++++ +LNG
Sbjct: 157 KIESTSNPIIKMIYKGFHIDINFAQLNSDRVPENIDDNLDELRRNLLQSEDKSMYALNGR 216
Query: 195 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 254
+ I + +P F LR ++ WAK+R V SN+ G+LGGI+WA+L+A+ICQL+P
Sbjct: 217 KNGILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGYLGGISWAILMAKICQLFPRVD 276
Query: 255 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP-RRNPKDKYHLMPIITPAYPCM 313
VS FF++Y+QW W PV++ E+ + + D +RN K +M IITPAYP
Sbjct: 277 LCQTVSLFFQIYSQWNWKVPVVIDESEQEIICYYLQDEDKRNDK----IMQIITPAYPFF 332
Query: 314 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA 373
N+++ V T + + EFQ G + DW+ + PF FF+ ++ ++ + I +
Sbjct: 333 NTTFKVHKITFQTIFQEFQIGAQKLG---------DWNEVLRPFDFFDCFQYFVALSIVS 383
Query: 374 ENADDLRNWKGWVESRLRQLTLKI---ERHTYNM----LQCHPHPGDFSDKSKPLYCSYF 426
+ +++ W G+ E++L +L LK+ Y+ L+ P + ++ +YF
Sbjct: 384 KTSENFHKWTGFCEAQLPKL-LKLVGNNEEVYDTKSFELRITPEGEENLERDHAKSLTYF 442
Query: 427 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR------KPGMQISVAHVT 474
+G+++ + E +RL + +F ++ L+ + M+I VA+VT
Sbjct: 443 LGIKKLK----QEAWPLFLRLPITQFAIELNQRKLQSFKNEDEFNMKIYVANVT 492
>gi|119620437|gb|EAX00032.1| poly(A) polymerase gamma, isoform CRA_d [Homo sapiens]
Length = 430
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 158/260 (60%), Gaps = 13/260 (5%)
Query: 232 GFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD 291
GFLGG++WA+LVAR CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWD
Sbjct: 3 GFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWD 62
Query: 292 PRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWD 351
PR NP D+YHLMPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW
Sbjct: 63 PRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWS 120
Query: 352 TLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 411
L EP FF+ Y++Y+ + SA ++ W G VES++R L +ER+ + L H +P
Sbjct: 121 KLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNP 179
Query: 412 GDFS-----DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLR 462
F K +F+G+ ++ V E D+ ++ F V + +
Sbjct: 180 QSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINML 238
Query: 463 KPGMQISVAHVTRRNLPNFV 482
K GM+I HV ++ L +++
Sbjct: 239 KEGMKIEATHVKKKQLHHYL 258
>gi|440493736|gb|ELQ76169.1| Poly(A) polymerase, nucleotidyltransferase [Trachipleistophora
hominis]
Length = 696
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 203/375 (54%), Gaps = 53/375 (14%)
Query: 145 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 204
P + K + IDL++ARL+L+ I L++ S+L+N DE++V SLNG RVTD+IL LV
Sbjct: 316 PGLNKKMVEIKIDLVFARLNLFKIDGSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLV 375
Query: 205 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 264
P F LRC+++WAKRR + ++ G+ GG+ +A+ VARICQL+PN ++ ++F
Sbjct: 376 PNKTVFHGALRCIKYWAKRRALTGHLYGYFGGVAYAISVARICQLFPNVCEYTIICKYFE 435
Query: 265 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 324
+Y +W+WP PV+L IE + L+VWDP+ +P DK+H MP+ITP+YP M S++N+ ST+
Sbjct: 436 LYKEWKWPMPVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIMNSTM 495
Query: 325 RIMMDEFQRGHE-ICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA-----DD 378
+ +E +R H+ + E E W+ F FF+ Y+++L + I +NA +D
Sbjct: 496 KRYKEELERAHKLLVEGAE-------WNEFFRGTDFFQRYRSFLAVFILLKNAGCTTNND 548
Query: 379 LRN--------------------WKGWVESRLRQLTLKIERHTYNMLQCHP--------- 409
R+ W+G V SR+R L+ K+E T L P
Sbjct: 549 ARSEQEITNEQASGAKETSMHKMWQGHVNSRIRFLSTKLE--TVEQLDSAPPFPQTFDMC 606
Query: 410 -----HPGDFSDKSKPLYCSY-FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK 463
HP F K+ CS F+ L + + F I ++EFK+ V + R
Sbjct: 607 GFLGLHPLAFIPKNA--LCSLTFIALDMADSKQLLRKKVF-IDAPIEEFKEMVFDWDKRT 663
Query: 464 PGMQISVAHVTRRNL 478
M + + + R+++
Sbjct: 664 EDMDLVMRAMKRKDV 678
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 94/151 (62%), Gaps = 3/151 (1%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M + ++ GIT P+SL + DD+ RT L +L +Y++ EEA+ RE VLGRL +
Sbjct: 1 MHLPHSKKHGITGPLSLKESSQDDIARTSSLHAFLVSSKIYDTDEEAIIRERVLGRLSYM 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
++K I KGL D ++ A +I+TFGSYRLGVH G+DIDTLCV P + R+E FF
Sbjct: 61 FDNFIKAIGTKKGLADSDIRTATGRIYTFGSYRLGVHARGSDIDTLCVAPVYVDRKE-FF 119
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKFKF 151
E + ML ++ E+ V DA+VP+M+ +
Sbjct: 120 EEFYVMLNDV--FAEVEKVEDAYVPLMQLVY 148
>gi|145551783|ref|XP_001461568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429403|emb|CAK94195.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 235/439 (53%), Gaps = 38/439 (8%)
Query: 58 DQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREE 117
++IVK W ++ ++ K +N+ L+ +A + +GS LGV +DID +C+ P R E
Sbjct: 53 EKIVKKWSQQCAKEKRINEDHLKYCSAVLLPYGSVLLGVADSKSDIDLICIAPEFIDRRE 112
Query: 118 DFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 177
FF L +L+ + +++ + P++K + G ID+ +A+L+ +PE++D + D
Sbjct: 113 QFFNGLFYLLSNEQGMEQINKIESTSNPIIKMIYKGFHIDINFAQLNSDRVPENIDDNLD 172
Query: 178 SILQN---ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 234
+ +N ++++++ +LNG + I + +P F LR ++ WAK+R V SN+ G+L
Sbjct: 173 ELRRNLLQSEDKSLYALNGRKNGILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGYL 232
Query: 235 GGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD--- 291
GGI+WA+L+A+ICQL+P VS FF++Y+QW W PV++ E+ + ++ +
Sbjct: 233 GGISWAILMAKICQLFPRVDVCQTVSLFFQIYSQWNWKIPVVIDESEQDFIQIETFKTLC 292
Query: 292 -PRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW 350
R K +M IITPAYP N+++ V+ T + + EFQ G + DW
Sbjct: 293 WKRDEDKRNDKIMQIITPAYPFFNTTFKVNKITFQTIFQEFQIGAQKLG---------DW 343
Query: 351 DTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH-------TYN 403
+ + P FF+ ++ ++ I I ++++++ W G+ E++L +L LK+ H T
Sbjct: 344 NEVLRPLDFFDCFQYFVAISIVSKSSENFHKWTGFCEAQLPKL-LKLIGHNEAIYDNTSF 402
Query: 404 MLQCHPHPGDFSDKSKPLYCSYFMGLQRKQ--------GVPVGEGEQFDIRLTVKEFKQA 455
L+ P + ++ +YF+G+++ + +P+ QF I L ++ +
Sbjct: 403 ELRITPDGEENLERDYAKSLTYFLGIKKLKPDAWPLFLRIPIT---QFAIELNQRKLQ-- 457
Query: 456 VSMYTLRKPGMQISVAHVT 474
S + M+I VA+VT
Sbjct: 458 -SFKNEEEFNMKIYVANVT 475
>gi|219124076|ref|XP_002182338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406299|gb|EEC46239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 777
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 162/563 (28%), Positives = 254/563 (45%), Gaps = 121/563 (21%)
Query: 26 MRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRA-----KGLN-DQLL 79
+ + + + +D QEE V R + + L +++ W ++ + G++ DQL
Sbjct: 98 VESARFRQIWKDSFPAHPQEERV-RRDAMDDLTRLLAQWAGTLAASVMTSTSGMSRDQL- 155
Query: 80 QEANAKIFTFGSYRLGVHGPGA-DIDTLCVGPRHATREEDFFGELHQMLT-----EMPEV 133
I FGSYRLGVH PG+ D+D L + P H +R E FF ++L+
Sbjct: 156 -SVYPTIVPFGSYRLGVHRPGSSDLDVLVIAPPHCSRNE-FFTSFVELLSTPANGSQNTF 213
Query: 134 TELHPVPDAHVPVMKFKF-SGVSIDLLYA------RLSLW------------VIPEDLDI 174
T++H +P A+ PV+K ++ S + +D+L+ +L W +P+ L
Sbjct: 214 TQIHAIPTAYTPVLKCQYASSLPMDMLFVSVADPTKLIAWRQQSSMKADSRMTLPQHLPP 273
Query: 175 SQ---------------------------------------DSILQNADEQTVRSLNGCR 195
Q DS L + D VRSLNG R
Sbjct: 274 WQPGVDAEAGAGGSIYPKFEEPHTNEQASTTTTTALYYRIDDSDLCDQDPAGVRSLNGAR 333
Query: 196 VTDQILRLVPKI--QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 253
VT +L LV + + F+ L ++ WA+ +GVYSNV GF GG+NWA+LVA +C+ YP +
Sbjct: 334 VTQTLLDLVIPVGLERFQMVLLMVKAWARAQGVYSNVLGFWGGVNWAILVAYVCRAYPES 393
Query: 254 VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLG--------LQVWDPRRNPKDKYHLMPI 305
+ V FF + W+WP PV L + + S+ L W+P + +D H+ PI
Sbjct: 394 SIADTVQLFFETFANWKWPTPVSLIDLNDASITTPPPGAAVLPSWNPAIHIRDGLHVCPI 453
Query: 306 ITPAYPCMNSSYNVSTSTLRIMMDEFQ-RGHEICEAMEKNEA----------DVDWDTLF 354
+TPAYP MNSSYNV+ LR M + Q H+I ++++ + W L+
Sbjct: 454 LTPAYPVMNSSYNVALPQLRRMTEALQYTAHKIARWVDRSHTTYNRGVPVRRKIPWHRLW 513
Query: 355 EPFT-FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE---RHTYNMLQCHPH 410
+ +++Y+ I A + W VESRLR L +E H + PH
Sbjct: 514 SLNAGWVFRHQHYVHATIRAPQGEAFVTWFRLVESRLRVLISSLETPDSHAW------PH 567
Query: 411 PGDFSDKSKPLY----------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 460
G F ++ P+ +F+GL+ V + D+R +F + V+ +
Sbjct: 568 -GRFFYRNVPIAPYDELNGLREAHFFIGLRFASHV-----DTADVRTLTLDFLRQVNGWI 621
Query: 461 LRKPGMQISVAHVTRRNLPNFVF 483
R M +S+ HVT NLP FV
Sbjct: 622 GRDSSMDLSLGHVTLPNLPRFVL 644
>gi|429964357|gb|ELA46355.1| hypothetical protein VCUG_02160 [Vavraia culicis 'floridensis']
Length = 708
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 147/218 (67%), Gaps = 6/218 (2%)
Query: 154 VSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 213
+ IDL++ARL+++ I L++ S+L+N DE++V SLNG RVTD+IL LVP + F
Sbjct: 314 IKIDLVFARLNVFKIDSSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLVPNKKVFHGA 373
Query: 214 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN 273
LRC+++WAKRRG+ ++ G+ GG+ +A+ VARICQL+PN ++ ++F +Y +W+WP
Sbjct: 374 LRCIKYWAKRRGLTGHLYGYFGGVAYAISVARICQLFPNMCEYTMICKYFELYKEWKWPT 433
Query: 274 PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 333
PV+L IE + L+VWDP+ +P DK+H MP+ITP+YP M S++N+ ST++ +E +R
Sbjct: 434 PVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIINSTMKRYKEELER 493
Query: 334 GHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 371
GH + + +W F FF+ YK++L + I
Sbjct: 494 GHRLLAEGK------EWKEFFRSTDFFQRYKSFLAVFI 525
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW 64
+ ++ GIT P+S+ +DD+ R+ L+ +L +YE+ EEA++RE VLGRL + +
Sbjct: 5 HSKKYGITGPLSVKESPEDDIARSSSLQAFLLSSKIYETNEEAITRERVLGRLSYMFDNF 64
Query: 65 VKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELH 124
+K I KGL D ++ A+ +I+TFGSYRLGVH G+DIDTLCV P + R+E FF E +
Sbjct: 65 IKAIGTKKGLTDSDIKAASGRIYTFGSYRLGVHARGSDIDTLCVAPVYVDRKE-FFEEFY 123
Query: 125 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSID 157
ML+++ E+ V DA+VP+M+ + ID
Sbjct: 124 SMLSDV--FAEVEKVEDAYVPLMQLVYREHRID 154
>gi|440789895|gb|ELR11186.1| Poly(A) polymerase central domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1230
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/410 (34%), Positives = 206/410 (50%), Gaps = 53/410 (12%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFG 90
L +YL Y+ ++ R+ + + Q K ++K N Q+ E + G
Sbjct: 731 LYRYLVANKSYDLDQQRKQRQAAVRLVSQACKEVIEK-----NYNGQVNCEV---LHLLG 782
Query: 91 SYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFK 150
S ++GV +D+D LCVGP + FF EL L + ++ V DA VPV+K +
Sbjct: 783 SCQMGVQTADSDVDALCVGPDTMSCSR-FFMELRVALEKTKKLQSAREVHDAKVPVLKLQ 841
Query: 151 FSGVSIDLLYARLSLWVI---PEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI 207
+GV +DLLY V P +D D L+ + +RS++GCR D ILR VP +
Sbjct: 842 INGVEVDLLYGPYPSSVPITPPSQID---DRSLRKFEPAVLRSISGCRDGDAILRSVPNV 898
Query: 208 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC---QLYPN-----------A 253
+F+T LR ++ WAKRRG+YSN GFLGG +W++LVA +C +LY +
Sbjct: 899 SHFQTVLRAVKLWAKRRGLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDLS 958
Query: 254 VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 313
+ L++ FF VY W W PV AI GS R P K MPI+TP P
Sbjct: 959 IEERLLAEFFEVYNHWDWQQPV---AITPGSA-------RYKPGHKSDKMPIVTPTPPFN 1008
Query: 314 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA 373
NS+ NV+ STL M EF R +I +A + N ++ + L +P FF+ Y YL +++ +
Sbjct: 1009 NSARNVARSTLTEMQQEFFRAFDITQASQWN-SEAGLNDLLQPTNFFKDYHYYLMVEVHS 1067
Query: 374 ENADDLRNWK-------GWVESRLRQLTLKIER--HTYNMLQCHPHPGDF 414
++D++ W GW+ESRL L +E+ TY P PG F
Sbjct: 1068 LSSDEVTKWPTNFSLSLGWLESRLIALIFDLEKNPQTY----ARPFPGTF 1113
>gi|308472139|ref|XP_003098298.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
gi|308269146|gb|EFP13099.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
Length = 343
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 202/392 (51%), Gaps = 56/392 (14%)
Query: 151 FSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNF 210
+SG+ +D+L+ARL IPE++D+S DS+L N DE ++RSLNG RV +Q+L+LVP F
Sbjct: 3 YSGIELDVLFARLDKPTIPENIDLSDDSLLVNLDESSIRSLNGIRVAEQLLKLVPNRDTF 62
Query: 211 RTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR 270
+LR ++ WAK GVYSN GF GGI WA+LVA+ CQLYPNA PS ++ + F V++ W+
Sbjct: 63 CQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVAKTCQLYPNAAPSKIIQKVFFVFSTWK 122
Query: 271 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 330
WP+PV+L + C++S STL I+ +E
Sbjct: 123 WPSPVVL------------------------------KQFGCVDSKLANLKSTLHIIQEE 152
Query: 331 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 390
+ EIC+ ++K A W+ LFE FF YK+++ + I+ + G+ ES++
Sbjct: 153 MKSALEICDQIQKGNA--TWNDLFEEINFFSRYKHFVALTINEDTN------IGFFESKI 204
Query: 391 RQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 450
RQL IER++ + H +P + ++F+GL+ + + D+ ++
Sbjct: 205 RQLVQIIERNS-QVKTAHINPRKLKNIRNE--STWFLGLEFTEN-----AKNLDLTSEIE 256
Query: 451 EFKQAVSMYTLRKPG----MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERK 506
FK+ +M + G +Q+ +V R +L F+ G ++ R K S+ A RK
Sbjct: 257 GFKR--NMARQQSKGIVGQIQLDATYVKRSDLIKFISLGDLKRGRFVK----SKTAANRK 310
Query: 507 VSSHTKPGADDGRKRKQTDDNVDTHLRNAKCH 538
+ + + + R VD+ L K +
Sbjct: 311 RPASSGDSTETKKPRVIDMSAVDSMLLKLKSN 342
>gi|118376886|ref|XP_001021625.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|89303391|gb|EAS01379.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 707
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 242/488 (49%), Gaps = 37/488 (7%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS-RAKG 73
+S P + D + + K + D Y ++E + +E+++ ++ +IV W+ I+ +
Sbjct: 137 LSQEYPQEQDYQESSYI-KQMIDKYFYHPEKEKL-KEQIIMKIQEIVNQWMVNININERK 194
Query: 74 LNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 133
+ +Q+ A++ FGSY LGV D+D +C+ P R + F G+L+ M++ M V
Sbjct: 195 IPEQVAHMQLARVLPFGSYFLGVSSVDGDVDLVCIAPNFVDRFKHFNGQLYDMISNMDGV 254
Query: 134 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS-QDSILQNADEQTVRSLN 192
+ V DA VP+M+F+ GV ID+ +A+L + +P+D+D D+ L DE+ S+N
Sbjct: 255 EYHNNVIDAKVPIMQFEIQGVPIDISFAQLDVETLPDDIDKQIPDTHLTMMDERDKLSIN 314
Query: 193 GCRVTDQILRLVPK--------IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
G R I+R V + Q F+ +L+ ++ WA+ G+Y N G+LGGI+WALL+A
Sbjct: 315 GYRCNQAIIRYVTEHSEDKQQSKQRFQESLKVIKIWARNNGIYENRLGYLGGISWALLLA 374
Query: 245 RICQLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
+ICQ++PN + ++ +FF Y+ W+WP VLL + P K++ M
Sbjct: 375 KICQMFPNLEVNGIIEQFFLQYSSWKWPTMEVLLGPFSQ---------PEERQKNQKFEM 425
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 363
I TPAYP NS+ V L I+ + + + I + E WD L + F Y
Sbjct: 426 SIYTPAYPEYNSTERVKKINLEIIDYKIKEANRIIQE-EIKTGQAPWDRLIQEEDFLNKY 484
Query: 364 KNYLRID-ISAENADDLRNWKGWVES---RLRQLTLKIERHTYNMLQCHPHPGDF--SDK 417
++ ID I E + +R +K + +L L + L+ P P + D+
Sbjct: 485 TKFIEIDLIRIERDETMREFKTQQDKLSVKLLTLFEFFSQKKPQELEIRPWPFFYKKKDQ 544
Query: 418 SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF--KQAVSMYTLRKPGMQISVAHVTR 475
P ++ +G++ K + E++ + ++EF +Q S+ L I V T+
Sbjct: 545 KYPQCSAFLIGIKAKSHI----QEEYSFKNCIQEFAMQQRKSLDAL--TNCMIRVFQATK 598
Query: 476 RNLPNFVF 483
++L + F
Sbjct: 599 QDLNDIAF 606
>gi|440294386|gb|ELP87403.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 482
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 213/414 (51%), Gaps = 21/414 (5%)
Query: 28 TRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIF 87
T +L YL +Y + EE RE+ + L+++V+ W KKI +K + AKIF
Sbjct: 2 TDELRGYLEKNGMYPTPEEKKEREKAISYLNEVVEKWGKKIYISKTGTSENTDVCAAKIF 61
Query: 88 TFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVM 147
T+GSYRL V+G ADID CV EDFF +L++ L P+V E+ + P++
Sbjct: 62 TYGSYRLDVYGNNADIDA-CVVTNSTIEREDFFNDLYEDLKNNPDVREIRQIKSVRAPIL 120
Query: 148 KFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP-- 205
+ + IDL +AR + +P+++DI + IL DE + R++NG R TD I VP
Sbjct: 121 TMTYMKIDIDLNFARTAHTTLPKEMDILSERILDEMDELSTRAINGRRNTDMINNFVPPH 180
Query: 206 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 265
++ F+ +R ++ W+K+RG+Y V +L GI+ +LVA++ L+ +FF
Sbjct: 181 SVEAFKVIVRAIKMWSKKRGIYGYVYSYLNGISIEILVAQVISENYQLDNVRLLEKFFHA 240
Query: 266 YTQWRWP-NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 324
Y W W NPV+L ++ R + K ++ +ITPA P NS YN++ S+L
Sbjct: 241 YATWDWARNPVMLGVSDD-----------RPERKKEEMVQVITPAAPRENSMYNMTRSSL 289
Query: 325 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA-DDLRNWK 383
++ E RG I + K+E DW+ LF+ F Y Y+ ++ S + + L N
Sbjct: 290 ELLKREMLRGERIVKGY-KSEGGNDWNLLFKKRHCFCGY--YIFVEFSVRGSLESLENKI 346
Query: 384 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV 437
G ES++ + +E +++ + P + + + Y++G+ K+ + V
Sbjct: 347 GMFESKIVRFVRSLEEME-EVIEVNVIPEGYLEVENAV-DYYYVGMNVKKDLLV 398
>gi|402697301|gb|AFQ90838.1| polyA polymerase alpha, partial [Dendropicos gabonensis]
Length = 170
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 127/170 (74%), Gaps = 1/170 (0%)
Query: 100 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 159
GADID LCV PRH R DFF ++ L + EV +L V +A VPV+K F G+ ID+L
Sbjct: 2 GADIDALCVAPRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 160 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 219
+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 220 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 269
WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|224088990|ref|XP_002308592.1| predicted protein [Populus trichocarpa]
gi|222854568|gb|EEE92115.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/146 (64%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
Query: 350 WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 409
W LFEP+ FFEAYKNYL++DI A +A DL WKGWVESRLRQLTLKIER T MLQCHP
Sbjct: 218 WSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDTDGMLQCHP 277
Query: 410 HPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQI 468
+P ++ D SK +C++FMGLQRK+GV EG+QFDIR TV EF+Q ++MY KPGM I
Sbjct: 278 YPNEYIDPSKQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQDINMYLPWKPGMDI 337
Query: 469 SVAHVTRRNLPNFVFPGGVRPSRPSK 494
V+HV RR LP FVFP G + SRPS+
Sbjct: 338 YVSHVRRRQLPGFVFPDGYKRSRPSR 363
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 121/203 (59%), Gaps = 48/203 (23%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWV 65
+R GI +PIS+AGPT+ DL R +LEK R YE + R R D WV
Sbjct: 12 AKRYGIMKPISVAGPTEPDLHRNAELEKQRRG---YEER-----RCSGPYRSD-----WV 58
Query: 66 KKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
K+++R +G DQ+++EANA IFTFGSYRLGVHGPGADIDTLCVGP + RE
Sbjct: 59 KRLTRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNRE--------- 109
Query: 126 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 185
L EM EVTEL PVPDAHVP DLDIS S+L DE
Sbjct: 110 -LAEMEEVTELQPVPDAHVP-------------------------DLDISNGSVLYEVDE 143
Query: 186 QTVRSLNGCRVTDQILRLVPKIQ 208
QTVRSLNGCRV DQIL+LVP ++
Sbjct: 144 QTVRSLNGCRVADQILKLVPNVE 166
>gi|340546035|gb|AEK51816.1| poly(A) polymerase alpha [Heteronotia binoei]
Length = 170
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 126/170 (74%), Gaps = 1/170 (0%)
Query: 100 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 159
GADID LCV PRH R DFF ++ L EV +L V +A VPV+K F G+ ID+L
Sbjct: 2 GADIDALCVAPRHVDRS-DFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 160 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 219
+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 220 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 269
WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|402697299|gb|AFQ90837.1| polyA polymerase alpha, partial [Cyrtodactylus sp. JJF-2012]
Length = 170
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 126/170 (74%), Gaps = 1/170 (0%)
Query: 100 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 159
GADID LCV PRH R DFF ++ L EV +L V +A VPV+K F G+ ID+L
Sbjct: 2 GADIDALCVAPRHVDRS-DFFTSXYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 160 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 219
+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 220 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 269
WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|115474207|ref|NP_001060702.1| Os07g0688500 [Oryza sativa Japonica Group]
gi|113612238|dbj|BAF22616.1| Os07g0688500 [Oryza sativa Japonica Group]
Length = 447
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/375 (33%), Positives = 189/375 (50%), Gaps = 62/375 (16%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEAN 83
D RT L ++L+D S E RE+V+ +L++IV W K ++ + + + A
Sbjct: 60 DSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRVPPR---RAT 116
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 143
A + T+GSY LG HGP +DID LCVGP AT + FF L Q+L + PEV+EL V A
Sbjct: 117 ATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVESA- 175
Query: 144 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
+ + S +LQ D + RSL+G RV +QI++L
Sbjct: 176 --------------------------KAIITSNPHLLQKLDSLSWRSLSGVRVNEQIVQL 209
Query: 204 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 263
VP Q F+ LRC++ WAKRRG++ ++ GF GI+ A+L A +CQ YP ++
Sbjct: 210 VPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINV------ 263
Query: 264 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 323
SL Q + RR P + MPI+ P P + N++ T
Sbjct: 264 --------------------SLHGQPTNCRR-PDGSF--MPILLPCTPPEFCTSNMTKGT 300
Query: 324 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 383
+ + +E RG+ + + E D +W LF PF + Y+ +LRI + A +++LR+W
Sbjct: 301 FKKIREELMRGYALTK--EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWA 358
Query: 384 GWVESRLRQLTLKIE 398
GWV+SR L LK+E
Sbjct: 359 GWVKSRF-NLILKLE 372
>gi|294943027|ref|XP_002783739.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239896395|gb|EER15535.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 274
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/271 (42%), Positives = 163/271 (60%), Gaps = 20/271 (7%)
Query: 118 DFFGELHQM-LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ 176
D F EL + L+E+ +VT L+PVP A VPV+K KF GV +D+LY L+ + +D +
Sbjct: 4 DAFFELFPLKLSELNDVTNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGPAIDPAD 63
Query: 177 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
D++L DE++ RS+NG RV+D I VP +F LR +R WA+RRG+YSN G+LGG
Sbjct: 64 DNLLCGMDEKSARSINGVRVSDAIKTCVPHFAHFLGALRVIRAWARRRGIYSNALGYLGG 123
Query: 237 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRW---PNPVLLCAIE----EGSLGLQV 289
++WA+LVAR+CQL+PN PS LV RFFRVY++W W V+L E EG +V
Sbjct: 124 VSWAILVARVCQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKV 183
Query: 290 W--DPRRNPKDK-----YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAME 342
W P+R D+ M +ITPAYP MNS++ V+ ++ + E +RG I +
Sbjct: 184 WCPPPKRTTTDQPLPLAASPMAVITPAYPSMNSTFGVTRMSMDTIKKELERGAGIISSKG 243
Query: 343 KNEADVD-WDTLFEPFTFFE----AYKNYLR 368
+ + W+TL EP FF+ YK +L+
Sbjct: 244 VDLRSRECWETLLEPIHFFDYDQGGYKQFLQ 274
>gi|219887573|gb|ACL54161.1| unknown [Zea mays]
gi|414888169|tpg|DAA64183.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888170|tpg|DAA64184.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 482
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 158/254 (62%), Gaps = 5/254 (1%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEAN 83
D R+ L ++L+D S E+ RE+V+ L +IV W ++ + + L A
Sbjct: 78 DHRRSSSLVQFLKDEGAVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQGL---AT 134
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 143
A + T+GSY LG HGP +DID LC+GP AT + FF L Q+L PEV+E+H V A
Sbjct: 135 ATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEKAK 194
Query: 144 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
VP+M+F+F+G+++DL YA+L + + ++ +LQ D ++ RSL+G RV +QI++L
Sbjct: 195 VPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIVQL 254
Query: 204 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 263
VP + F+T LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+A S L + FF
Sbjct: 255 VPNAEKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVSGLFAVFF 314
Query: 264 RVYTQWRW--PNPV 275
+ + W W P+P+
Sbjct: 315 QTFAHWPWQVPDPL 328
>gi|413955903|gb|AFW88552.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 370
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 158/265 (59%), Gaps = 7/265 (2%)
Query: 14 PISLAGPTDD----DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
PI +A P + D R+R L K++ + + S E+ RE V+ L +IV W ++++
Sbjct: 55 PIPVALPHEVIMYMDECRSRSLLKFISNAGIEPSLEDERRRERVVRELGKIVMDWARRVA 114
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+G + +A + TFGSY LG +GP +DID LC+GP A+ + FF L QML
Sbjct: 115 YEQGKQHWI---TSATVLTFGSYALGAYGPESDIDVLCIGPYIASLQHHFFVVLRQMLEG 171
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
PEV+ELH + A VP+M+FKF+G+ +D Y +L + E + +L+N D + R
Sbjct: 172 RPEVSELHSIEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWR 231
Query: 190 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 249
L+G R QI++LVP ++ F+ LRC++ WA++RG+ ++ GF GI+ A+L A +C+
Sbjct: 232 CLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIHLAILAAYVCRR 291
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNP 274
+PNA + L+S FF ++ W WP P
Sbjct: 292 HPNASINTLLSLFFDIFVHWPWPLP 316
>gi|402697303|gb|AFQ90839.1| polyA polymerase alpha, partial [Malaclemys terrapin]
Length = 170
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 123/170 (72%), Gaps = 1/170 (0%)
Query: 100 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 159
GADID LCV PR R DFF ++ EV +L V +A VPV+K F G+ ID+L
Sbjct: 2 GADIDALCVAPRXVDRS-DFFTSFYEKXKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 160 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 219
+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 220 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 269
WAKR +YSN+ GF GG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 121 WAKRHNIYSNILGFXGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|317026523|ref|XP_001389757.2| poly(A) polymerase Pap [Aspergillus niger CBS 513.88]
Length = 428
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 134/212 (63%), Gaps = 6/212 (2%)
Query: 206 KIQN-FRTTLRCMR-FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 263
K+QN F + R WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FF
Sbjct: 36 KVQNNFESPAETERSLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFF 95
Query: 264 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 323
R+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST
Sbjct: 96 RIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMST 155
Query: 324 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNW 382
+++ E QRG +I + + + + W+ LF TFF + YK YL I S+ + W
Sbjct: 156 KAVILRELQRGGDIVDKIFLKQ--LRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVW 213
Query: 383 KGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
G VES++R L ++R + HP P F
Sbjct: 214 SGLVESKIRHLVGALDRKA-TIAIAHPFPKGF 244
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 416 DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHV 473
D + +Y + Y++GL+ K P G DI + FK + + +PG+ +++ HV
Sbjct: 306 DDTHVMYTTTYYIGLELKPLEP-GASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHV 364
Query: 474 TRRNLPNFVF-PGGVRPSRP 492
+LP VF PG RP+RP
Sbjct: 365 RNFDLPEDVFQPGETRPTRP 384
>gi|134055882|emb|CAK44143.1| unnamed protein product [Aspergillus niger]
Length = 393
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 130/206 (63%), Gaps = 6/206 (2%)
Query: 212 TTLRCM--RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 269
T L C WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+ +W
Sbjct: 3 TGLLCAPSSLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKW 62
Query: 270 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 329
WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +++
Sbjct: 63 AWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILR 122
Query: 330 EFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVES 388
E QRG +I + + + + W+ LF TFF + YK YL I S+ + W G VES
Sbjct: 123 ELQRGGDIVDKIFLKQ--LRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVES 180
Query: 389 RLRQLTLKIERHTYNMLQCHPHPGDF 414
++R L ++R + HP P F
Sbjct: 181 KIRHLVGALDRKA-TIAIAHPFPKGF 205
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 416 DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHV 473
D + +Y + Y++GL+ K P G DI + FK + + +PG+ +++ HV
Sbjct: 267 DDTHVMYTTTYYIGLELKPLEP-GASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHV 325
Query: 474 TRRNLPNFVF-PGGVRPSRP 492
+LP VF PG RP+RP
Sbjct: 326 RNFDLPEDVFQPGETRPTRP 345
>gi|67481711|ref|XP_656205.1| poly(A) polymerase [Entamoeba histolytica HM-1:IMSS]
gi|74890661|sp|Q51D88.1|PAP_ENTHI RecName: Full=Poly(A) polymerase; Short=PAP; AltName: Full=EhPAP;
AltName: Full=Polynucleotide adenylyltransferase
gi|56473392|gb|EAL50821.1| poly(A) polymerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709651|gb|EMD48877.1| poly(A) polymerase, putative [Entamoeba histolytica KU27]
Length = 522
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 212/412 (51%), Gaps = 20/412 (4%)
Query: 30 KLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS-RAKGLNDQLLQEANAKIFT 88
+L+++L ++Y ++ + + + ++ + ++ W KKI + G+ D +A A I+
Sbjct: 4 ELKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVKA-ATIYV 62
Query: 89 FGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 148
+GSYRL V+G +DID V TR+ DF+ L+ L P+V EL +P P +
Sbjct: 63 YGSYRLNVYGNNSDIDACIVSNSTITRD-DFYDGLYAELLNNPDVKELKQIPSKRSPHLS 121
Query: 149 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI- 207
+ + DL ++R + +P++LDI ++IL+N DE R++NG R TD I VP
Sbjct: 122 MIYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHS 181
Query: 208 -QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 266
+ FR +R ++ W K+RG+Y V FL GI+ +LVA++ L+ +FF+VY
Sbjct: 182 EEAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVY 241
Query: 267 TQWRW-PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 325
+ W W PV+L ++ N K K ++ I+TPA P N++++++ +L
Sbjct: 242 SSWDWLRTPVMLGTNDDF-----------NDKKKEGVIQILTPASPSENAAFSITKFSLE 290
Query: 326 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 385
++ E +RG EI +E DW LF+P F Y ++ +++ + + L G
Sbjct: 291 MIKRELKRGQEIVHEF-SSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGK 349
Query: 386 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV 437
ES L L +K +++ + P F D+ Y Y++G+ K+ PV
Sbjct: 350 FESGLVNL-MKGLSEIEEIIEANVIPNGFLDEENEKYF-YYVGMNVKRDCPV 399
>gi|407036560|gb|EKE38225.1| poly(A) polymerase, putative [Entamoeba nuttalli P19]
Length = 522
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 212/412 (51%), Gaps = 20/412 (4%)
Query: 30 KLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS-RAKGLNDQLLQEANAKIFT 88
+L+++L ++Y ++ + + + ++ + ++ W KKI + G+ D +A A I+
Sbjct: 4 ELKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVKA-ATIYV 62
Query: 89 FGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 148
+GSYRL V+G +DID V TR+ DF+ L+ L P+V EL +P P +
Sbjct: 63 YGSYRLNVYGNNSDIDACIVSNSTITRD-DFYDGLYAELLNNPDVKELKQIPSKRSPHLS 121
Query: 149 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI- 207
+ + DL ++R + +P++LDI ++IL+N DE R++NG R TD I VP
Sbjct: 122 MIYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHS 181
Query: 208 -QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 266
+ FR +R ++ W K+RG+Y V FL GI+ +LVA++ L+ +FF+VY
Sbjct: 182 EEAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVY 241
Query: 267 TQWRW-PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 325
+ W W PV+L ++ N K K ++ I+TPA P N++++++ +L
Sbjct: 242 SSWDWLRTPVMLGTNDDF-----------NDKKKEGIIQILTPASPSENAAFSITKFSLE 290
Query: 326 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 385
++ E +RG EI +E DW LF+P F Y ++ +++ + + L G
Sbjct: 291 MIKRELKRGQEIVHEF-SSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGK 349
Query: 386 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV 437
ES L L +K +++ + P F D+ Y Y++G+ K+ PV
Sbjct: 350 FESGLVNL-MKGLSEIEEIIEANVIPNGFLDEENERYF-YYVGMNVKRDCPV 399
>gi|167393770|ref|XP_001740701.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165895071|gb|EDR22875.1| poly(A) polymerase [Entamoeba dispar SAW760]
Length = 521
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 211/412 (51%), Gaps = 20/412 (4%)
Query: 30 KLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS-RAKGLNDQLLQEANAKIFT 88
+L+++L ++Y ++ + + + ++ + ++ W KKI + G+ D A A I+
Sbjct: 4 ELKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVRA-ATIYV 62
Query: 89 FGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 148
+GSYRL V+G +DID V TR+ DF+ L+ L P+V EL +P P +
Sbjct: 63 YGSYRLNVYGNNSDIDACIVSNSTITRD-DFYDGLYAELLNNPDVKELKQIPSKRSPHLS 121
Query: 149 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI- 207
+ + DL ++R + +P++LDI ++IL+N DE R++NG R TD I VP
Sbjct: 122 MIYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHS 181
Query: 208 -QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 266
+ FR +R ++ W K+RG+Y V FL GI+ +LVA++ L+ +FF+VY
Sbjct: 182 EEAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVY 241
Query: 267 TQWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 325
+ W W PV+L ++ N K K ++ I+TPA P N++++++ +L
Sbjct: 242 SSWDWLRAPVMLGTNDDF-----------NDKKKEGVIQILTPASPSENAAFSITKFSLE 290
Query: 326 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 385
++ E +RG EI +E DW LF+P F Y ++ +++ + + L G
Sbjct: 291 LIKRELKRGQEIVHEF-SSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGK 349
Query: 386 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV 437
ES L L +K +++ + P F D+ Y Y++G+ K+ PV
Sbjct: 350 FESGLVNL-MKGLSEIEEIVEANVIPNGFLDEENEKYF-YYVGMNVKRDCPV 399
>gi|403274237|ref|XP_003928889.1| PREDICTED: poly(A) polymerase alpha [Saimiri boliviensis
boliviensis]
Length = 495
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 151/259 (58%), Gaps = 23/259 (8%)
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFF 118
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 415
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENP 178
Query: 416 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQI 468
DK + + +GL K+ E D+ ++ F +QA++ M+ + M+I
Sbjct: 179 DKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKI 233
Query: 469 SVAHVTRRN----LPNFVF 483
+ HV R+ LPN V
Sbjct: 234 AAMHVKRKQLHQLLPNHVL 252
>gi|402877145|ref|XP_003902301.1| PREDICTED: poly(A) polymerase alpha [Papio anubis]
gi|119602049|gb|EAW81643.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
gi|119602053|gb|EAW81647.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
Length = 495
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 151/259 (58%), Gaps = 23/259 (8%)
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFF 118
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 415
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENP 178
Query: 416 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQI 468
DK + + +GL K+ E D+ ++ F +QA++ M+ + M+I
Sbjct: 179 DKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKI 233
Query: 469 SVAHVTRRN----LPNFVF 483
+ HV R+ LPN V
Sbjct: 234 AAMHVKRKQLHQLLPNHVL 252
>gi|384080895|dbj|BAM11110.1| poly(A) polymerase alpha, partial [Siebenrockiella crassicollis]
Length = 352
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 152/260 (58%), Gaps = 23/260 (8%)
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
A+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+
Sbjct: 1 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 60
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE F
Sbjct: 61 YHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNF 118
Query: 360 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDF 414
F+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 178
Query: 415 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQ 467
DK + + +GL K+ E D+ ++ F +QA++ M+ + M+
Sbjct: 179 PDKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMK 233
Query: 468 ISVAHVTRRN----LPNFVF 483
I+ HV R+ LPN V
Sbjct: 234 IAAMHVKRKQLHQLLPNHVL 253
>gi|1709573|sp|P51005.1|PAPO2_XENLA RecName: Full=Poly(A) polymerase alpha-B; Short=PAP-alpha-B;
AltName: Full=Polynucleotide adenylyltransferase alpha-B
gi|643646|gb|AAC59746.1| poly(A) polymerase type 2 [Xenopus laevis]
Length = 484
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 152/261 (58%), Gaps = 16/261 (6%)
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 360
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLVKA--EWSKLFDAPNFF 118
Query: 361 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 415
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P + S
Sbjct: 119 QKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPSPSENS 178
Query: 416 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISV 470
+K + + +GL K+ + E D+ ++ F +QA++ ++I+
Sbjct: 179 EKEE-FRTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVYRQAINSKMFET-EIKIAA 235
Query: 471 AHVTRRNLPNFVFPGGVRPSR 491
HV R+ L + + P V P +
Sbjct: 236 MHVKRKQL-HQLLPSHVLPKK 255
>gi|297695842|ref|XP_002825134.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Pongo abelii]
Length = 497
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 151/261 (57%), Gaps = 25/261 (9%)
Query: 241 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR--RNPKD 298
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVNPSD 60
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE
Sbjct: 61 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPN 118
Query: 359 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGD 413
FF+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 FFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE 178
Query: 414 FSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGM 466
DK + + +GL K+ E D+ ++ F +QA++ M+ + M
Sbjct: 179 NPDKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DM 233
Query: 467 QISVAHVTRRN----LPNFVF 483
+I+ HV R+ LPN V
Sbjct: 234 KIAAMHVKRKQLHQLLPNHVL 254
>gi|242035935|ref|XP_002465362.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
gi|241919216|gb|EER92360.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
Length = 589
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 174/345 (50%), Gaps = 48/345 (13%)
Query: 61 VKIWVKK----ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRE 116
V +WVK SRA + + + A+ K + +GP +DID LC+GP AT +
Sbjct: 179 VAVWVKSGFWAFSRA-CVVEAPIDNASGKAIPWDQ----AYGPESDIDVLCIGPYIATLQ 233
Query: 117 EDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ 176
FF L QML PEV+EL + A VP+M+FKF+G+ +D Y +L E +
Sbjct: 234 HHFFVVLRQMLEGRPEVSELQSIEGAKVPLMRFKFNGILVDFPYVQLPFINAAEAMHAFD 293
Query: 177 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
+L+N D + R L+G R QI++LVP ++ + GF G
Sbjct: 294 PHVLENVDGPSWRCLSGVRANRQIIQLVPNMK---------------------LLGFFAG 332
Query: 237 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR--- 293
I+ A+L A +C+ +PNA + L+S FF ++ W WP PV L DP
Sbjct: 333 IHLAILAAYVCRRHPNASINTLLSLFFDIFAHWPWPLPVSLL------------DPPVLC 380
Query: 294 RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL 353
R P D LMPI+ P P S + + ST + +E +RG+ + + + D DW L
Sbjct: 381 RGP-DGCSLMPIMLPCNPPEFCSSSTTESTFSKIKEELRRGYALTK--DTRSTDFDWSWL 437
Query: 354 FEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 398
F F + YK +LRI +SA ++LR+W GWV+SR R L LK+E
Sbjct: 438 FASFPYGARYKCFLRIVLSAPLDEELRDWVGWVKSRFRNLLLKLE 482
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 11 ITEPISLAGPTDD----DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ PI +A P + D R+R L K++ D + S E+ RE V+ L +IV W K
Sbjct: 52 LSRPIPMALPREVIVYMDECRSRSLLKFISDAGIVPSLEDERRRERVVRELGKIVMEWAK 111
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLG 95
+++ +G + +A + TFGSY LG
Sbjct: 112 RVAYEQGKQHWI---TSATVLTFGSYALG 137
>gi|324504415|gb|ADY41908.1| Poly(A) polymerase gamma [Ascaris suum]
Length = 560
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 148/266 (55%), Gaps = 27/266 (10%)
Query: 233 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-------SL 285
FLGG++WA+LVAR CQLYPNA P+ L+ +FF V+T+W WP+PVLL ++ S
Sbjct: 50 FLGGVSWAILVARTCQLYPNAAPAKLIQKFFLVFTRWEWPHPVLLKDCDQTPRPPDMQSF 109
Query: 286 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 345
VWDPR D+YHLMPIITPA+P NS++NV+ ST +++M+E + G I +E
Sbjct: 110 QELVWDPRTRSCDRYHLMPIITPAFPEQNSTFNVTKSTRQVIMNELEEGLAI--TIEILS 167
Query: 346 ADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 405
+W LF+ FF YK+++ + A N +D W G VES++R L +ER+ L
Sbjct: 168 GKAEWSKLFDEVNFFSRYKHFIVLLCVAANENDQLVWSGLVESKIRHLIGNLERNPCVSL 227
Query: 406 QCHPHPGDFSDKS---------KPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 456
CH +P F+ S P +F+G++ + + + D+ +++F AV
Sbjct: 228 -CHINPQHFTPISPLPIEISIENPCCQMWFIGMELNKQL----KKNIDLTDEIQQFNDAV 282
Query: 457 ----SMYTLRKPGMQISVAHVTRRNL 478
+ PGM + ++V R +L
Sbjct: 283 MRAADFQNVYCPGMAVLPSYVRRADL 308
>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
aurantiaca DW4/3-1]
Length = 1024
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 195/418 (46%), Gaps = 38/418 (9%)
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+I K LN+ + +++ +GS+ +G G G+D+D + +GP H +RE DF G L Q
Sbjct: 626 RIQAVKRLNE-VCSRLGLELYPYGSFLMGTSGTGSDVDAVVIGPAHLSRE-DFAGALLQA 683
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIP---EDLDISQDSILQNA 183
LT+ + + DA +P++K GV D+ YA V P +L Q L
Sbjct: 684 LTQEKDCEGARFIADAAIPLVKLSLGGVHFDVSYASRPEGVAPCPPAELLARQGERL--- 740
Query: 184 DEQTVRSLNGCRVTDQILRLVPK----IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
D RSL G TD +L V + ++ FRT LR ++ WAK RGVYS+ G+LGG +W
Sbjct: 741 DLAGFRSLTGWADTDALLECVGREEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFSW 800
Query: 240 ALLVARICQLYP---NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 296
A+L A C P + L+ FF ++ W WP PV L G+ R P
Sbjct: 801 AVLTAWACMRAPRDSSRTEEQLLDYFFEMFAAWPWPLPVTLTP---GTA-------RYVP 850
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 356
+ K MP++ PA P N++ NVS STLR++ +E R E + WD LF P
Sbjct: 851 EGKRDQMPVVAPALPPRNTARNVSRSTLRVLREELARASEALRRARQEGTAEAWDALFAP 910
Query: 357 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
+ + + A+ +D + GW+ L L ++E L+ P
Sbjct: 911 VEIPGPTAAQVVVSVEAKAHEDRQVAAGWILGHLTALVYRLEGDRRLFLRPFP------- 963
Query: 417 KSKPLYCSYFMGLQRKQGVPVGEGEQFD----IRLTVKEFKQAVSMYTLRKPGMQISV 470
S+P + +GL QG G+ ++ + EF+++ ++ R PG +SV
Sbjct: 964 PSQP-EGPFRIGLS-AQGPEAGQALSHHPGAPLQRALDEFRESFHAWSHRPPGASLSV 1019
>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
Length = 1080
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 195/418 (46%), Gaps = 38/418 (9%)
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
+I K LN+ + +++ +GS+ +G G G+D+D + +GP H +RE DF G L Q
Sbjct: 682 RIQAVKRLNE-VCSRLGLELYPYGSFLMGTSGTGSDVDAVVIGPAHLSRE-DFAGALLQA 739
Query: 127 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIP---EDLDISQDSILQNA 183
LT+ + + DA +P++K GV D+ YA V P +L Q L
Sbjct: 740 LTQEKDCEGARFIADAAIPLVKLSLGGVHFDVSYASRPEGVAPCPPAELLARQGERL--- 796
Query: 184 DEQTVRSLNGCRVTDQILRLVPK----IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
D RSL G TD +L V + ++ FRT LR ++ WAK RGVYS+ G+LGG +W
Sbjct: 797 DLAGFRSLTGWADTDALLECVGREEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFSW 856
Query: 240 ALLVARICQLYP---NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 296
A+L A C P + L+ FF ++ W WP PV L G+ R P
Sbjct: 857 AVLTAWACMRAPRDSSRTEEQLLDYFFEMFAAWPWPLPVTLT---PGTA-------RYVP 906
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 356
+ K MP++ PA P N++ NVS STLR++ +E R E + WD LF P
Sbjct: 907 EGKRDQMPVVAPALPPRNTARNVSRSTLRVLREELARASEALRRARQEGTAEAWDALFAP 966
Query: 357 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
+ + + A+ +D + GW+ L L ++E L+ P
Sbjct: 967 VEIPGPTAAQVVVSVEAKAHEDRQVAAGWILGHLTALVYRLEGDRRLFLRPFP------- 1019
Query: 417 KSKPLYCSYFMGLQRKQGVPVGEGEQFD----IRLTVKEFKQAVSMYTLRKPGMQISV 470
S+P + +GL QG G+ ++ + EF+++ ++ R PG +SV
Sbjct: 1020 PSQP-EGPFRIGLS-AQGPEAGQALSHHPGAPLQRALDEFRESFHAWSHRPPGASLSV 1075
>gi|383455075|ref|YP_005369064.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
gi|380728996|gb|AFE04998.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
Length = 1021
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 158/329 (48%), Gaps = 22/329 (6%)
Query: 77 QLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTEL 136
Q + A + +GSY LG G G+D+D + +GP +R D F Q L +
Sbjct: 625 QHCERIGATLHPYGSYLLGTDGAGSDVDAVAIGPAELSR--DAFA---QSLLQALAPGSA 679
Query: 137 HPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 196
V DA +P++K GVS DL YA V PED + D +R++ G
Sbjct: 680 RYVADAAIPLVKLTLGGVSFDLAYAGRPEGVPPEDPLTLLGLHGEQLDPAGLRAVLGLAD 739
Query: 197 T----DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-QLYP 251
T D + R + + FRT LR ++ WA+ RG+YS+ G+LGG++W LL A C + P
Sbjct: 740 TLGLMDAVARDAARTERFRTLLRAVKAWARARGIYSHALGYLGGLSWTLLAAWACTRATP 799
Query: 252 NAVPS--MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 309
+A+ S L+S FF + W WP PV L R P+ K L+P+I PA
Sbjct: 800 DAMRSDAALLSHFFGTFAAWPWPQPVTLTPETA----------RYRPEGKRDLLPVIAPA 849
Query: 310 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
P N++ NVS ST R++ +E R E+ + A W LF+P + E LR+
Sbjct: 850 LPARNTARNVSRSTYRVIREELLRARELVARARSSRAPSSWAALFQPLSAHETSPAALRL 909
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIE 398
+ A A+D GW+ + L ++E
Sbjct: 910 SVDAPTAEDREVVAGWILGHVTALVYRLE 938
>gi|354681993|ref|NP_001238936.1| poly(A) polymerase alpha isoform 3 [Homo sapiens]
gi|28071108|emb|CAD61935.1| unnamed protein product [Homo sapiens]
gi|119602054|gb|EAW81648.1| poly(A) polymerase alpha, isoform CRA_e [Homo sapiens]
Length = 238
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 135/214 (63%), Gaps = 3/214 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L +++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKL 139
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 189
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 190 SLNGCR--VTDQILRLVPKIQNFRTTLRCMRFWA 221
SLNG R + +L+ + I F T+ F A
Sbjct: 200 SLNGMRKPTSFCVLQFLSDISCFYTSFVLKLFIA 233
>gi|242786597|ref|XP_002480837.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
gi|218720984|gb|EED20403.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
Length = 420
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 117/196 (59%), Gaps = 39/196 (19%)
Query: 54 LGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA 113
L + ++V +VK + R KGL+ L+ A KIFT+GSYRLGV+GP
Sbjct: 18 LQLIQRVVIEFVKTVGRRKGLSPAALEAAGGKIFTYGSYRLGVYGP-------------- 63
Query: 114 TREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD 173
VPDA VP++K +FSG+S+DL++ARL L IP +LD
Sbjct: 64 -------------------------VPDAFVPIIKLEFSGISLDLIFARLILPSIPLNLD 98
Query: 174 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGF 233
+ + L+ D++ VRSLNG RVTDQIL LV + + FR LR ++ WA+RR +YSN+ GF
Sbjct: 99 LKNNGYLRGLDDKEVRSLNGTRVTDQILELVAQQKTFRLALRAIKLWAQRRAIYSNIVGF 158
Query: 234 LGGINWALLVARICQL 249
GG+ WA+LVAR+CQL
Sbjct: 159 PGGVAWAMLVARVCQL 174
>gi|146163985|ref|XP_001012769.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146145863|gb|EAR92524.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 641
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 135/229 (58%), Gaps = 2/229 (0%)
Query: 43 SQEEAVSREEVLGRLDQIVKIWVKKISRA-KGLNDQLLQEANAKIFTFGSYRLGVHGPGA 101
++E +S++ + L +IV W ++++ G++ + ++ AK+ TFGS LGV
Sbjct: 61 TEETELSKQRYVNELQEIVTKWSTELAQQILGVSSEESKKYTAKLLTFGSSILGVSSKKG 120
Query: 102 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYA 161
DID +C P R F EL Q+L V +L + A VP++ F++ ID+ +A
Sbjct: 121 DIDMVCTCPNFIKRNPHFEEELCQILLNNENVKQLSNIRTAKVPIITFQYKEQDIDISFA 180
Query: 162 RLSLWVIPEDLD-ISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 220
+L L +P ++ D +LQN +E+ + SL+G R I+R VP +QNF+ T R ++ W
Sbjct: 181 QLQLPQLPPTIEEYVSDDLLQNMEERDILSLSGRRCNQAIVRSVPNLQNFQITCRFIKLW 240
Query: 221 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 269
A+ +G+Y N GFLGGI+WA+LVA+ICQ++PN + L+ FF Y+ W
Sbjct: 241 AQSKGIYENSIGFLGGISWAILVAKICQMFPNYEANQLLDEFFYYYSNW 289
>gi|384485719|gb|EIE77899.1| hypothetical protein RO3G_02603 [Rhizopus delemar RA 99-880]
Length = 494
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 200/393 (50%), Gaps = 37/393 (9%)
Query: 34 YLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFT--FGS 91
YL N+ E++EE + R+ V+ L I+ + + +++ D + + + F FGS
Sbjct: 16 YLERYNIIETEEEKIKRKNVIDLLQHILVNFQRAVTK-----DLDWKRGDIECFLSPFGS 70
Query: 92 YRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKF 151
Y LG + ADID + V P R+ FF Q+L + V+ + + A+VP++K
Sbjct: 71 YALGGYIRDADIDLVLVCPIQVLRKY-FFKFFPQLLKQQTLVSNVESIQKANVPIIKCTI 129
Query: 152 SGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT----DQILRLVPKI 207
+SID+ + RL + + ++++ DS+L++ DE + S++G RV +QI R +
Sbjct: 130 DNISIDISFVRLKVERVAQNINFLDDSLLKDIDETCLASMDGPRVNQFCKNQIYR--QHV 187
Query: 208 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA---VPSMLVSRFFR 264
+ F+ L+C++ WA +RG+YS G+L G +W LL+ + N +M++SRFF
Sbjct: 188 RLFQVCLQCIKHWATQRGIYSKPIGYLNGSSWTLLLVKAYMSIKNKELLSVTMILSRFFS 247
Query: 265 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH--LMPIITPAYPCMNSSYNVSTS 322
+++QW W PV+L G G ++ N ++ +MPI++P +P N + V+ S
Sbjct: 248 MWSQWPWQMPVMLTDYIPGINGTKI---EYNSLAEFDNAVMPIVSPCHPVCNVAPYVTKS 304
Query: 323 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 382
T RIM EF+RG + A + D LF P + + YK+++ I S+ W
Sbjct: 305 TRRIMQIEFERGWTLLNKNAHPFAII--DKLFNPVNYTQRYKHFINIVTSSTTITSHDTW 362
Query: 383 KGWVESRLRQLTLKIERHTY------NMLQCHP 409
+R++ +I R+ N+LQ P
Sbjct: 363 -------VRKMATQIPRYLELIESDPNILQAQP 388
>gi|6473835|dbj|BAA87187.1| PolyA polymerase [Schizosaccharomyces pombe]
Length = 204
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 108/162 (66%), Gaps = 2/162 (1%)
Query: 237 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 296
+ WA++VARICQLYPNAV S++V++FFR+ QW WP P+LL IE+G L +++W+P+ P
Sbjct: 1 VAWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYP 60
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 356
DK H MPIITPAYP M +++N++ ST I++ E R EI + + + W LF+
Sbjct: 61 SDKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKA--LPWSALFQK 118
Query: 357 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 398
FF YK+YL I +A+ A+ W G VES+LR L ++E
Sbjct: 119 HDFFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLE 160
>gi|300120198|emb|CBK19752.2| unnamed protein product [Blastocystis hominis]
Length = 359
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 137/244 (56%), Gaps = 16/244 (6%)
Query: 221 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI 280
A +RG+Y NV G+LGG+N ALL LYPNA S+++ FR++ +W W PVL+ +
Sbjct: 109 AYKRGIYKNVTGYLGGVNCALLCCYASLLYPNATASVVLYNCFRIFAEWDWQKPVLVRDV 168
Query: 281 E---EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 337
+ E VW+P+ N + + L PI+TP YP NS+YNV ST +M+ EF+R ++
Sbjct: 169 QLNPELGHDKDVWNPKENERCQNDLFPILTPCYPSQNSTYNVMASTRDVMVAEFKRARDV 228
Query: 338 CEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKI 397
++ K E W TLF+ F FF +YK Y++I++SA+ ++ NW G+VES++R+ T I
Sbjct: 229 TLSILKGET--TWATLFKEFPFFTSYKYYIQIEVSAKTSEVFNNWYGFVESQIRRYTRMI 286
Query: 398 ERHTYNMLQCHPHPGD--------FSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV 449
E + ++ +P D + PL +++ + +G+ D+ L
Sbjct: 287 EGNKSIVIHVYPTSFDVVRERGSSYVQPDSPLCKQFYIAFTPLEA---AKGKPLDLSLAT 343
Query: 450 KEFK 453
++FK
Sbjct: 344 RQFK 347
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 53/84 (63%)
Query: 36 RDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLG 95
R + LYES+ E REE+L L I++ VKKI AK L E A ++TFGS+R+
Sbjct: 3 RSLRLYESKNEIDHREELLKSLQSILRECVKKILTAKNLYSNQEPEELASLYTFGSFRMM 62
Query: 96 VHGPGADIDTLCVGPRHATREEDF 119
VH P ADIDT+CVGP TREE F
Sbjct: 63 VHEPWADIDTMCVGPGSVTREEFF 86
>gi|340503458|gb|EGR30046.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 269
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 140/247 (56%), Gaps = 21/247 (8%)
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 143
AK+ FGS+ LGV DID +C P+ RE F +L+++ + EL + +A+
Sbjct: 4 AKLLPFGSFLLGVSFKEGDIDMVCASPQFIKRETHFHEDLYKIFKANKNIKELKNIIEAN 63
Query: 144 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS-QDSILQNADEQTVRSLNGCRVTDQILR 202
+P++ F ++ ID+ +A+ L ++PE+++ + +L++ E+ V SLNG R I+
Sbjct: 64 IPIISFIYNDQDIDISFAQFKLNILPENIEGEIPEELLEDMTEKDVDSLNGRRCNQSIIN 123
Query: 203 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 262
V + F+ TL+ ++ WAK +GVY+N+ GFLGGI+WA+LVA+ICQ++PN + L++ F
Sbjct: 124 SVKDQEKFKNTLKFIKLWAKSKGVYNNMLGFLGGISWAILVAKICQMFPNYEVNQLINEF 183
Query: 263 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH---------LMPIITPAYPCM 313
F YT W + + +++ + N K K++ M ++T +P
Sbjct: 184 FYYYTHWDF-----------SQIPIKIKEYYENTKHKHYNIKKRKESIFMNVMTSCFPEY 232
Query: 314 NSSYNVS 320
NS+ ++S
Sbjct: 233 NSTAHLS 239
>gi|442319649|ref|YP_007359670.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
gi|441487291|gb|AGC43986.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
Length = 1016
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 160/347 (46%), Gaps = 38/347 (10%)
Query: 68 ISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
++R GL +++ + +GSY LG G+D+D + +GP +R++ L ++
Sbjct: 619 VARLHGLCERI----GTSLHPYGSYLLGTDEAGSDVDAVAIGPSSLSRDDFAHALLREVA 674
Query: 128 TEMPEV-TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIP-----------EDLDIS 175
T PE + V DA +P++K GVS D+ YA V P LD S
Sbjct: 675 TSAPEAASSARFVADAAIPLVKLSLGGVSFDVSYASRPEGVTPCEPLTLLAQHAPQLDTS 734
Query: 176 Q-DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 234
S+L AD Q V G TD+ + FR LR ++ WAK RG+YS+ G++
Sbjct: 735 GLRSVLGVADSQGVLDALG---TDEATH-----ERFRNLLRAVKRWAKARGIYSHALGYM 786
Query: 235 GGINWALLVARIC-QLYPNAVPS--MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD 291
GG++W +L A C + P+A S L++ FF+ + W WP PV L G
Sbjct: 787 GGLSWTVLAAWACTRGAPDAAKSDAELLAHFFQTFASWPWPQPVALTQETAGY------- 839
Query: 292 PRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWD 351
P K LMP+I PA P N++ NVS ST R + +E R E+ + + W+
Sbjct: 840 ---RPDGKRDLMPVIAPAEPLRNTARNVSRSTFRTVREELVRARELVTGARASSSPHAWE 896
Query: 352 TLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 398
LF+P LR+ + A + GWV L L ++E
Sbjct: 897 PLFQPVDAPRDLPARLRLSVEAPTPEAHEAAMGWVLGHLTALVYRLE 943
>gi|72386969|ref|XP_843909.1| poly(A) polymerase [Trypanosoma brucei]
gi|62359037|gb|AAX79486.1| poly(A) polymerase [Trypanosoma brucei]
gi|70800441|gb|AAZ10350.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 487
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 212/472 (44%), Gaps = 56/472 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G T+P+ + P D D + L L + ++S VL ++ + V++
Sbjct: 6 GPTKPLEVPRPQDHDYDESEMLYGVLAEC-------PSISPNPVLTLVESMALRIVQR-- 56
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ Q QE A+ + FGS L +D+D + P T + FF E ++L
Sbjct: 57 -----HSQNTQEQWARAYPFGSCGLSASVAESDLDVALICPSVLT-TDIFFDEFPRLL-- 108
Query: 130 MPEVTELHPVP--DAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 187
+ PV A VPV+KF++ G ++D+++ + L P + + DS L +T
Sbjct: 109 ---YNSVGPVSVVAARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKVARET 165
Query: 188 VRSLNGCRVTDQILRLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
S NG R T +I R +P + F L+ ++ WA RR VY NV + G A++VAR+
Sbjct: 166 RPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIMVARV 225
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPN----PVLLCAIEEGS---LGL-QVWDPRRNPKD 298
CQ+ P++ PS L+ FF YTQW + PV L A EG GL W P ++ K
Sbjct: 226 CQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSKD-KI 284
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
L P+I+PAYP +N + +V L + E R + + + + ++EP+
Sbjct: 285 CCDLFPVISPAYPYVNDASSVGRCGLEALYSEITR----VQCILTEARTLPLEEMWEPYR 340
Query: 359 FFEAYKNYLRIDIS------AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG 412
E Y +L + +S AE L W +V SRLR L IERH Q P P
Sbjct: 341 IEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA----QARPCPR 396
Query: 413 DFSDK--------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 456
K S L ++ +G++ K+G P + F EF AV
Sbjct: 397 KIRPKKDNHVGGSSCFLSVNFLIGVKAKEGGPTPQPSLFT--EACGEFHHAV 446
>gi|242051340|ref|XP_002463414.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
gi|241926791|gb|EER99935.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
Length = 460
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 155/324 (47%), Gaps = 42/324 (12%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEAN 83
D R+ L ++L+D S E+ RE+V+ L +IV W ++ + + L A
Sbjct: 84 DQRRSSSLVQFLKDEGAVPSPEDEKKREKVIRELKKIVMHWANAVAYEQSVPQGL---AT 140
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 143
A + T+GSY LG HGP +DID LCVGP AT + FF L Q+L PEV+EL + A
Sbjct: 141 ATVLTYGSYTLGAHGPESDIDVLCVGPCIATLQYHFFVVLRQLLEGRPEVSELQTIEKAK 200
Query: 144 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
VP+M+F+F+G+++D YA+L +
Sbjct: 201 VPLMRFRFTGIAVDFTYAQLP--------------------------------------V 222
Query: 204 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 263
+ ++ F+ LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+A + L + FF
Sbjct: 223 IDALKKFQALLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVNGLFAVFF 282
Query: 264 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 323
+ + W W P L + + + + P ++ + + P + + S
Sbjct: 283 QTFAHWPWQVPDSLRHDFQWTWLFEPF-PYDKKYQQFLRIALCAPTFAELRDWAGWVKSR 341
Query: 324 LRIMMDEFQRGHEICEAMEKNEAD 347
R+++ + +R C+ E D
Sbjct: 342 FRLLILKLERAGIECDPCPSEEVD 365
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 347 DVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 406
D W LFEPF + + Y+ +LRI + A +LR+W GWV+SR R L LK+ER ++
Sbjct: 299 DFQWTWLFEPFPYDKKYQQFLRIALCAPTFAELRDWAGWVKSRFRLLILKLERAG---IE 355
Query: 407 CHPHPGDFSDKS 418
C P P + D +
Sbjct: 356 CDPCPSEEVDHT 367
>gi|261327018|emb|CBH09993.1| poly(A) polymerase [Trypanosoma brucei gambiense DAL972]
Length = 487
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 211/472 (44%), Gaps = 56/472 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G T+P+ + P D D + L L ++ ++S VL ++ + V++
Sbjct: 6 GPTKPLEVPRPQDHDYDESEMLYGVL-------AECPSISPNPVLTLVESMALRIVQR-- 56
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ Q QE A+ + FGS L +D+D + P T + FF E ++L
Sbjct: 57 -----HSQNTQEQWARAYPFGSCGLSAAVAESDLDVALICPSVLT-TDIFFDEFPRLL-- 108
Query: 130 MPEVTELHPVP--DAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 187
+ PV A VPV+KF++ G ++D+++ + L P + + DS L +T
Sbjct: 109 ---YNSVGPVSVVAARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKVARET 165
Query: 188 VRSLNGCRVTDQILRLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
S NG R T +I R +P + F L+ ++ WA RR VY NV + G A++VAR+
Sbjct: 166 RPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIMVARV 225
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPN----PVLLCAIEEGS---LGL-QVWDPRRNPKD 298
CQ+ P++ PS L+ FF YTQW + PV L A EG GL W P ++ K
Sbjct: 226 CQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSKD-KI 284
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
L P+I+PAYP +N + +V L + E R I + + W EP+
Sbjct: 285 CCDLFPVISPAYPYVNDASSVGRCGLEALYSEITRVQCILTEVRTLPLEEMW----EPYR 340
Query: 359 FFEAYKNYLRIDIS------AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG 412
E Y +L + +S AE L W +V SRLR L IERH Q P P
Sbjct: 341 IEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA----QARPCPR 396
Query: 413 DFSDK--------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 456
K S L ++ +G++ K+G P + F EF AV
Sbjct: 397 KIRLKKDNHVGGSSCFLSVNFLIGVKAKEGGPTPQPSLFT--EACGEFHHAV 446
>gi|7108951|gb|AAF36551.1|AF201909_1 polyA polymerase [Trypanosoma brucei]
Length = 487
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 212/472 (44%), Gaps = 56/472 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G T+P+ + P D D + L L + ++S VL ++ + V++
Sbjct: 6 GPTKPLEVPRPQDHDYDESEMLYGVLAEC-------PSISPNPVLTLVESMALRIVQR-- 56
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ Q QE A+ + FGS L +D+D + P T + FF E ++L
Sbjct: 57 -----HSQNTQEQWARAYPFGSCGLSAAVAESDLDVALICPSVLT-TDIFFDEFPRLL-- 108
Query: 130 MPEVTELHPVP--DAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 187
+ PV A VPV+KF++ G ++D+++ + L P + + DS L +T
Sbjct: 109 ---YNSVGPVSVVAARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKVARET 165
Query: 188 VRSLNGCRVTDQILRLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
S NG R T +I R +P + F L+ ++ WA RR VY NV + G A++VAR+
Sbjct: 166 RPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIMVARV 225
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWRWPN----PVLLCAIEEGS---LGL-QVWDPRRNPKD 298
CQ+ P++ PS L+ FF YTQW + PV L A EG GL W P ++ K
Sbjct: 226 CQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSKD-KI 284
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
L P+I+PAYP +N + +V L + E R + + + + ++EP+
Sbjct: 285 CCDLFPVISPAYPYVNDASSVGRCGLEALYSEITR----VQCILTEARTLPLEEMWEPYR 340
Query: 359 FFEAYKNYLRIDIS------AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG 412
E Y +L + +S AE L W +V SRLR L IERH Q P P
Sbjct: 341 IEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA----QARPCPR 396
Query: 413 DFSDK--------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 456
K S L ++ +G++ K+G P + F EF AV
Sbjct: 397 KIRLKKDNHVGGSSCFLSVNFLIGVKAKEGGPTPQPSLFT--EACGEFHHAV 446
>gi|403331436|gb|EJY64664.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 1239
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 181/423 (42%), Gaps = 113/423 (26%)
Query: 25 LMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW-VKKISRAKGLNDQLLQEAN 83
LMR EKY +YE QE+ R+E+L +L I+ W ++ + + + + ++ +
Sbjct: 111 LMR----EKYT----IYEDQEQKRKRQEILAKLKDILDKWQIECAVKDRKILREDAEKRH 162
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 143
A I FGSY L H P D+D +CV P + + DFF + ++T EVT + V DA
Sbjct: 163 ASIHPFGSYELQAHFPETDMDVICVLPSYILHD-DFFNKFKNLITSYEEVTNVIDVVDAR 221
Query: 144 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
VPV+KFKF G ID+LYA + +I + I
Sbjct: 222 VPVLKFKFQGFQIDMLYACIDYKLIENNPKI----------------------------- 252
Query: 204 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 263
PK+ K +++ ++ GG+++A+LVA+ICQ + ++ +FF
Sbjct: 253 -PKM-------------IKDETIFNKLSQ--GGVSYAILVAKICQDNTDLYLCDIIYKFF 296
Query: 264 RVYTQWRWPNPVLL------CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 317
VY W+W +PV + + LQV D +MPI+TP NS+Y
Sbjct: 297 EVYADWKWFDPVFIRVGKKKDKTKLDLNKLQVLDAYSQD-----IMPILTPNTNPKNSAY 351
Query: 318 NVSTSTLRIMMDEFQRGHEICEAM------------------------------------ 341
V + T + EF RG + + +
Sbjct: 352 RVCSHTFDTICKEFTRGKNLMKELIPQSQKTIKPHPAALAKLALDQEETKLTVDALQIQE 411
Query: 342 -----------EKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 390
+K + W LF+ F FF+ Y+++L+IDI + + W G+VES+L
Sbjct: 412 SNQESQVQSPVQKQKQKQSWIKLFQKFRFFDQYEHFLKIDILSTDESAHLKWLGYVESQL 471
Query: 391 RQL 393
R+L
Sbjct: 472 RRL 474
>gi|427738965|ref|YP_007058509.1| poly(A) polymerase [Rivularia sp. PCC 7116]
gi|427374006|gb|AFY57962.1| poly(A) polymerase [Rivularia sp. PCC 7116]
Length = 1067
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 29/317 (9%)
Query: 89 FGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 148
GSYRLGV P +D+D +C P + + +DF + Q L + E +L V DA VP+++
Sbjct: 722 LGSYRLGVESPESDLDVVCQIPTYLS-GDDFLKNVQQRLKGLCESIQL--VLDAKVPLLR 778
Query: 149 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK-- 206
K G+S+DLLY +D + S + ++ ++ GC D I V +
Sbjct: 779 LKLEGISLDLLYT---------GVDKNWASGINPKPTKSEMAIIGCWEADFIREFVQEYV 829
Query: 207 -IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP--NAVPSMLVSRFF 263
+F+ LR +R WAK R +Y N GFLGG++WALL A CQ + P L++ FF
Sbjct: 830 PFDSFQWLLRAVRAWAKSRRIYGNNWGFLGGLSWALLSAWSCQYCDKNHTQPDKLLANFF 889
Query: 264 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 323
Q+ W P+ L + +QV P+D L+PIIT PC N++ N++ ST
Sbjct: 890 NHLNQYNWRQPIALTDAGK-QYSVQV------PRD---LLPIITSIEPCQNTARNITRST 939
Query: 324 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 383
I+ EF R E+ + E ++DW +LFEP + +L + + + L
Sbjct: 940 AEILSGEFARATEMTQ--EIAAGNLDWSSLFEPINLQQESDIFLNLKLIGNDKQQLEKEC 997
Query: 384 GWVESRLRQLTLKIERH 400
G++E + L +++E H
Sbjct: 998 GYLEGYIISLIIQLENH 1014
>gi|222623746|gb|EEE57878.1| hypothetical protein OsJ_08540 [Oryza sativa Japonica Group]
Length = 253
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 131/274 (47%), Gaps = 72/274 (26%)
Query: 149 FKFSGVSIDLLYARLSLWVIPEDLDISQ--DSILQNADE-QTVRSLNGCRVTDQILRLVP 205
+F GV +DL+YA + L P Q S+L+ D+ T RSLNG RV D+ILRLVP
Sbjct: 1 MRFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVP 60
Query: 206 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 265
+ FRT LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 61 ETAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPACCSRASSAA 120
Query: 266 YTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 323
P V+L AIE +G LGL RR+
Sbjct: 121 LRGGSGPARVMLRAIEHDDGELGL-----RRH---------------------------- 147
Query: 324 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 383
LR+ ++ G ++C+ + K A W
Sbjct: 148 LRVTTEQLAVGDDVCQEIVKAGA----------------------------------MWV 173
Query: 384 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
GWVESRLRQL+ ++E T +L CH HP ++ +
Sbjct: 174 GWVESRLRQLSARVEADTSGVLLCHLHPQAYATE 207
>gi|71660695|ref|XP_822063.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70887456|gb|EAO00212.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 485
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 177/364 (48%), Gaps = 32/364 (8%)
Query: 71 AKGLNDQLLQEAN---AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
A L DQ+ E + + FGS LG +D+D + T E FF E +L
Sbjct: 50 AHRLVDQITAEPEERWVRAYPFGSCGLGASVADSDLDIVLFCSFKVT-AEVFFREFPPLL 108
Query: 128 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 187
P V + VP A VPV+KF +SG S+D+++ +L P + DS L T
Sbjct: 109 --QPVVGNVVLVP-ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVARDT 165
Query: 188 VRSLNGCRVTDQILRLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
S+NG R ++ R +P + F T L+ ++ WA RR VY N+ + G+ A++VARI
Sbjct: 166 RHSVNGLRTVLEVKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMVARI 225
Query: 247 CQLYPNAVPSMLVSRFFRVYTQWR----WPNPVLLCAIEE--GSL-GL-QVWDPRRNPKD 298
CQ+ P + P++L+ FF YTQW +PV + E G + GL WDPRR+
Sbjct: 226 CQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYITTSLESRGRIPGLPDSWDPRRD-AC 284
Query: 299 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
+ L+P+I PAYP +N + NV +L + E + + +E + ++EP+
Sbjct: 285 RDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYAYRLLSNLET-----PLEAIWEPYH 339
Query: 359 FFEAYKNYLRIDISAENADD------LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG 412
+ Y + + ++ E ++ L W +V S+LR L +ER ++ P+P
Sbjct: 340 ILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER----IVDARPYPQ 395
Query: 413 DFSD 416
+D
Sbjct: 396 KLND 399
>gi|154417414|ref|XP_001581727.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121915957|gb|EAY20741.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 467
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 193/392 (49%), Gaps = 31/392 (7%)
Query: 90 GSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 149
GSY + P +D+D + + P++ T + DFF ++ L P + E V +A VP++K
Sbjct: 82 GSYLMDTWEPDSDVDVILIAPKYFTYK-DFFEGFYEELIRHPSIKETIKVENAFVPIIKT 140
Query: 150 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG---CRVTDQILRLVPK 206
+ +S+D+ +A L+ + ++L+ + + + + SLNG C + +++ P
Sbjct: 141 VCNDISVDISFAPLNNQIKIKNLNNIKKEDMDKLEPKAQLSLNGYLNCLLIRDLMKNHP- 199
Query: 207 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 266
NF R +R WA++R ++ N+ G+L GIN +++ A IC +PN SML+ FF +
Sbjct: 200 --NFPYFTRFIRNWAQKREIFGNLYGYLKGINISMMCAIICNQHPNCSLSMLIFHFFEYF 257
Query: 267 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 326
+ W W + ++ + Q+ DP M ++T +YP +NS V+TS+ +
Sbjct: 258 SSWDWD---IQLNLDSNTPDFQLNDP----------MILMTQSYPQINSLRAVTTSSRKR 304
Query: 327 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 386
++ E QR E + + +D+ W LF+ FF Y+ +L ID+ N+ G++
Sbjct: 305 IIKELQRALETTK--KALISDLSWQELFKGGCFFADYRYFLCIDLIPTNSQIKDEIIGFL 362
Query: 387 ESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIR 446
S+L +L +KI + + + P S K + +++GL K G+ + DI
Sbjct: 363 SSKLTRL-VKILEEIPGICEANIWPSKISYGGKII---FYIGLNTKS----GQSKTIDIN 414
Query: 447 LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 478
F +S TL K M I+ + ++ L
Sbjct: 415 HAKNNFISYISSSTLGK-AMSINFKIIRKKEL 445
>gi|401415606|ref|XP_003872298.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488522|emb|CBZ23768.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 500
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 207/436 (47%), Gaps = 60/436 (13%)
Query: 56 RLDQIVKIWVKKISRAKGLNDQLLQE------ANAKIFTFGSYRLGVHGPGADIDTLCVG 109
+ D++V++ + L ++LLQ A +++ FGS LG G+DID + +
Sbjct: 40 KTDEVVRL-------VRQLLEKLLQAEPSAAAAWTQVYVFGSSGLGAAITGSDIDLIALC 92
Query: 110 PRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIP 169
+ FF + + + + ++ V A VP++KF ++GV +DLL+A + + P
Sbjct: 93 -SASVNTSLFFQKFPR--SAEGRLQDVVVVTSARVPLIKFSYNGVHVDLLFASVDMRTAP 149
Query: 170 EDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP-KIQNFRTTLRCMRFWAKRRGVYS 228
+ ++ +D L ++NG R +I R +P + + LR +++WA RR VY
Sbjct: 150 DTNELLRDDFLSLVSLPCRATVNGIRTILEIRRRLPLPLDAYACVLRAVKYWAARRQVYG 209
Query: 229 NVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRW----PNPVLLCAIEEGS 284
N+ F G+ A++VAR CQL P A S+++ FF +Y W +PV + +E
Sbjct: 210 NLYTFPNGVCLAIMVARACQLCPVADSSVILRFFFSLYVWWLQRGTRIDPVSIVPTDENV 269
Query: 285 LGLQV------WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC 338
+V WD + D L P++ PA P +N+++ V S L++ + E R ++C
Sbjct: 270 AIARVPGMPPPWDAVWDAAD---LFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLC 326
Query: 339 EAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA------DDLRNWKGWVESRLRQ 392
+ + + L+EP+ + ++ ++ + IS+E+ D + WKG+VES+LR
Sbjct: 327 SLVP-----MPYSALWEPYNVLDEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKLRM 381
Query: 393 LTLKIERHTYNMLQCHPHPGDFSD--------KSKPLYC---SYFMGLQRKQGVPVGEGE 441
+E + + P P D + ++C ++F G++ +
Sbjct: 382 FVYALE----CVAEVRPFPCPVVDEPPRAVTRRGVTVHCRSRAFFFGVRNGN----KDVA 433
Query: 442 QFDIRLTVKEFKQAVS 457
D+ +EF+ AV+
Sbjct: 434 HSDVESAFREFEFAVT 449
>gi|301087134|gb|ADK60784.1| nucleic acid binding protein [Arachis diogoi]
gi|301087263|gb|ADK60848.1| putative nucleic acid binding protein, partial [Arachis diogoi]
Length = 74
Score = 145 bits (365), Expect = 1e-31, Method: Composition-based stats.
Identities = 60/74 (81%), Positives = 66/74 (89%)
Query: 238 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
N ALLVAR+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC IEE LG VWDPR+NP+
Sbjct: 1 NLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPR 60
Query: 298 DKYHLMPIITPAYP 311
D+ H MPIITPAYP
Sbjct: 61 DRTHHMPIITPAYP 74
>gi|224143336|ref|XP_002336029.1| predicted protein [Populus trichocarpa]
gi|222838985|gb|EEE77336.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 131/260 (50%), Gaps = 47/260 (18%)
Query: 341 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 400
+E N+A W LFEP+ FFEAYKNYL++DI A +A DL WKGWVESRLRQLTLK
Sbjct: 32 IELNKAQ--WSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLK---- 85
Query: 401 TYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 460
RK+GV EG+QFDIR TV EF+Q ++MY
Sbjct: 86 ------------------------------RKEGVTGQEGQQFDIRETVDEFRQDINMYL 115
Query: 461 LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRK 520
K GM I V+HV RR LP FVFP G + SRPS+ V+ A+ K
Sbjct: 116 PWKAGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHMNQQTNRTSEDVARSQSGSAERHVK 175
Query: 521 RKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNR 580
RK D + N K + SS+G R G +++++SS + ++ SN
Sbjct: 176 RKN-----DCEMANLKPSVSPSSSAG--RSG---VTSLASSCEGVILGRPTIGDIV-SNC 224
Query: 581 EKVENNLTDSIRGSRNSVEV 600
E V +N +S R S++V
Sbjct: 225 EDVASNSEESPLNQRTSMDV 244
>gi|146093287|ref|XP_001466755.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|134071118|emb|CAM69802.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
Length = 500
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 205/430 (47%), Gaps = 52/430 (12%)
Query: 58 DQIVKIWVKKISRAKGLNDQLLQE------ANAKIFTFGSYRLGVHGPGADIDTLCVGPR 111
D++V++ + L ++LLQ A +++ FGS L G+DID + +
Sbjct: 42 DEVVRL-------VRQLLEKLLQAEPSAAAAWTQVYVFGSSGLDAAITGSDIDLIALC-- 92
Query: 112 HATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPED 171
A+ FF + E + ++ V A VP++KF ++GV +DLL+A + + P+
Sbjct: 93 SASVNTSFFFQTFPRSAE-GRLQDVVVVTSARVPLIKFSYNGVHVDLLFASVDMRTAPDT 151
Query: 172 LDISQDSILQNADEQTVRSLNGCRVTDQILRLVP-KIQNFRTTLRCMRFWAKRRGVYSNV 230
++ +D L ++NG R +I R +P + + LR +++WA +R VY N+
Sbjct: 152 NELLRDDFLSLVSLPCRATVNGIRTILEIRRRLPLPLDAYACVLRAVKYWAAQRQVYGNL 211
Query: 231 AGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----PVLLCAIEEGSLG 286
F G+ A++VAR CQL P A +++ FF +Y W + PV + +E +
Sbjct: 212 YTFPNGVCLAIMVARACQLCPVADSGVILRFFFSLYVWWLLRDTRIAPVSIVPTDENAAI 271
Query: 287 LQV------WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA 340
+V WD + D L P++ PA P +N+++ V S L++ + E R ++C
Sbjct: 272 ARVPGMPPPWDAVWDAAD---LFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCAL 328
Query: 341 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA------DDLRNWKGWVESRLRQLT 394
+ + + L+EP+ + ++ ++ + IS+E+ D + WKG+VES+LR
Sbjct: 329 VP-----MSYSALWEPYNILDEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKLRMFV 383
Query: 395 LKI----ERHTYNMLQCHPHPGDFSDKSKPLYC---SYFMGLQRKQGVPVGEGEQFDIRL 447
+ E ++ P + + ++C ++F G++ + E D+
Sbjct: 384 YALECVAEVRPFSRPVVDEPPRVVTRRGVKVHCRSRAFFFGVRNGN----KDVEHSDVEA 439
Query: 448 TVKEFKQAVS 457
+EF+ AV+
Sbjct: 440 AFREFEFAVT 449
>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1251
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 161/340 (47%), Gaps = 45/340 (13%)
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 142
+A I GS++LGV +D+D LC+GP + + +++ E + + PV DA
Sbjct: 821 HASIQLTGSHQLGVDTSDSDLDVLCLGPHSLSLDAFQAAAVNEF--EAIGLRSVRPVCDA 878
Query: 143 HVPVMKFKF-SGVSIDLLYARLSLWVIPEDLDIS------QDSILQNADEQTVRSLNGCR 195
VP++K F SG DLLY RL P D + + L+ D +L G
Sbjct: 879 LVPLVKLVFRSGAEADLLYVRL-----PADAHLPCTPAQIKPRSLKAMDSTAQLTLQGWL 933
Query: 196 VTDQILRLVPK--IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR-ICQLYPN 252
D ++ +P+ + FR+ LR ++ WA RG+YSN AGFLGG +W++LVA + + P+
Sbjct: 934 ENDALVNAIPQPLLSTFRSLLRRVKQWALARGIYSNAAGFLGGFSWSVLVAHFMVKTKPS 993
Query: 253 AV----------PSM-LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY- 300
+ P + L+ FF W WP P+LL +L P D
Sbjct: 994 PLGDEDQDSTGRPLLALMHAFFVHVANWPWPQPILLNMPLGATL----------PADAIG 1043
Query: 301 -HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 359
+MP++TP +P NS+ VS STL +M E QRG ++ A AD + +P
Sbjct: 1044 ESVMPVMTPTWPTRNSARVVSVSTLSVMRAELQRGADLTAA-----ADCSLAAVADPLGV 1098
Query: 360 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 399
K L + + N +L GW+ SRL L ++ER
Sbjct: 1099 STLAKGILVVQLQCLNKSELERGAGWLLSRLGVLVHELER 1138
>gi|340052780|emb|CCC47065.1| putative polynucleotide adenylyltransferase [Trypanosoma vivax
Y486]
Length = 486
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 30/353 (8%)
Query: 81 EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML-TEMPEVTELHPV 139
E + + FGS L +D+D + P T FF E +L T + V V
Sbjct: 63 EQWVRAYPFGSCGLAASVADSDLDIVLFCPFKVT-AAVFFHEFPLLLQTVVGHVI----V 117
Query: 140 PDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 199
A VPV+KF G +DL++ ++L P + DS L +T S+NG R T +
Sbjct: 118 VAARVPVVKFAHEGTLVDLVFVSVALAAPPTTEQLLDDSFLLQVARETRHSVNGIRFTLE 177
Query: 200 ILRLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSML 258
I R +P + F T L+ ++ WA +R VY N+ + G+ A++VAR CQ+ P + P+++
Sbjct: 178 IKRRLPVTYDVFSTVLKVVKLWAMKRQVYGNLYTYPSGVVLAIMVARACQVMPASHPNVV 237
Query: 259 VSRFFRVYTQWRWPN----PVLLCAIEEGSLGL----QVWDPRRNPKDKYHLMPIITPAY 310
+ FF YTQW + PV + +G + + WDP K + L+P++ PAY
Sbjct: 238 LRFFFLFYTQWMSRHDRISPVYITTSLQGRGRVPGMPEPWDPALE-KFSHDLLPVLNPAY 296
Query: 311 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 370
P +N + V L + E R H + E + W +P++ + + ++L +
Sbjct: 297 PFVNDANAVGRCGLEVFYSEVTRAHHLLSTTESFPLEDVW----KPYSITDDFSSFLLVQ 352
Query: 371 ISAEN------ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
+S + +DL W +V S+LR L +E ++ P+P D+
Sbjct: 353 VSCDGNSEEGVENDLEVWSSYVASKLRILIYAVE----CIVDARPYPHKLKDR 401
>gi|70917416|ref|XP_732847.1| poly(A) polymerase PAP [Plasmodium chabaudi chabaudi]
gi|56504096|emb|CAH75014.1| poly(A) polymerase PAP, putative [Plasmodium chabaudi chabaudi]
Length = 199
Score = 139 bits (350), Expect = 6e-30, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 120/190 (63%), Gaps = 2/190 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+++P+SL PT++DL + + + L+ NL+E+++ RE+VLG ++++ +V ++S
Sbjct: 10 GVSDPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIELS 69
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
++G+N++ +E ++TFGSYRLGV P +DID + + P++ TR E FF E + L +
Sbjct: 70 ISQGINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNVTR-EIFFNEFYLKLQQ 128
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTV 188
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TV
Sbjct: 129 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTV 188
Query: 189 RSLNGCRVTD 198
RSLNG RV D
Sbjct: 189 RSLNGIRVAD 198
>gi|405977001|gb|EKC41474.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 323
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 162/345 (46%), Gaps = 49/345 (14%)
Query: 271 WPNPVLLCAI---EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 327
WP PVLL ++ + +L VWDPR N D +HLMPIITP YP N+++ V+ S+ IM
Sbjct: 3 WPQPVLLKSLVHENKHNLSFPVWDPRVNTSDMFHLMPIITPTYPHENTTFTVTLSSRSIM 62
Query: 328 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 387
+E + G EI + E +W LFEP FF+ YK+YL + +S D W G+ E
Sbjct: 63 TEELKDGFEIVSKIY--EGREEWGALFEPSNFFQKYKHYLVLTVSTVEEKDYLEWHGYAE 120
Query: 388 SRLRQLTLKIERH-TYNMLQCHPHP-GDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 445
S+LR L +ER+ + HP P G ++ C +F+GL V + D+
Sbjct: 121 SKLRLLIGNLERNPCIKLAHVHPSPLGPLNESDDEHLCRWFIGL---TFVKIENQNFVDL 177
Query: 446 RLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSR 500
++ F KQA + L K GM++ + HV RR L +V P + S
Sbjct: 178 TFDIQSFTNTVHKQAYHI-NLMKDGMKVKIKHVKRRQLGLYVPPEILLQS---------- 226
Query: 501 RALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS--SSGEFREGSPIMSTI 558
++V++ +P + G K ++C+ T+ + S E EG+ + +I
Sbjct: 227 ----KRVAAAQEPTSSIGSASK------------SECNQTLHNTRSDTELVEGNWVPLSI 270
Query: 559 SSSSINLQFEHMDANEL--AGSNREKVENNLTDSIRGSRNSVEVS 601
S IN E + A + G+N + N + + R E+S
Sbjct: 271 HSFHIN---EDLVAGMIKNGGANVTRYNNTVRVCLFSHRTRPEIS 312
>gi|434384462|ref|YP_007095073.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
gi|428015452|gb|AFY91546.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
Length = 1037
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 177/360 (49%), Gaps = 36/360 (10%)
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDF--FGELHQMLTEMPE---VTELHP 138
A + GS RLGV +D+D +C+ P + T E + Q L + PE
Sbjct: 638 ASLHLLGSARLGVASSTSDLDVVCLIPDYLTGESFLTRVADCLQGLCDSPEERLCQRSQV 697
Query: 139 VPDAHVPVMKFKFSGVSIDLLYARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCR 195
V DA PV++ + G+S+DLLY ++++ W D+ + + +S+ GC
Sbjct: 698 VLDAKYPVLRLEIEGISLDLLYTQVAVSDGWETRNIRDL-------RSQIKDTKSIVGCW 750
Query: 196 VTDQILRLVP---KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY-- 250
D I+ LV +++ F+ L+ +R WAK RG+Y N GFLGG +W+LL A C Y
Sbjct: 751 EADLIVDLVKQQLRLERFQMLLKAVRSWAKVRGLYGNSWGFLGGFSWSLLCAYTCIDYRG 810
Query: 251 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 310
P+ + L++ FF++ +Q W + L LG Q + P+D L+PII+
Sbjct: 811 PDKSLAALLANFFQILSQHNWRQTIAL-----TELGKQ--HQVKLPQD---LLPIISSIE 860
Query: 311 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 370
PC N++ N++ ST +I+ DEF R EI + + W +L+EP L I+
Sbjct: 861 PCKNTARNITRSTAKILRDEFARAAEISTNILVGKD--AWTSLYEPIDLTIGTNALLSIE 918
Query: 371 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQ 430
I + + +ES + LT+++E+ + P+P + +SK ++ + F+ L+
Sbjct: 919 ILDTDEQCRQKCSDLLESTIIGLTIQLEQLDVFV---RPNPQISTSESKSIF-TLFLQLR 974
>gi|389594193|ref|XP_003722343.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
gi|321438841|emb|CBZ12601.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
Length = 500
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 203/434 (46%), Gaps = 60/434 (13%)
Query: 58 DQIVKIWVKKISRAKGLNDQLLQE------ANAKIFTFGSYRLGVHGPGADIDTLCVGPR 111
D++V++ + L +++LQ A +++ FGS L G+DID + +
Sbjct: 42 DEVVRL-------VRQLLEKMLQAEPSAAAAWTQVYVFGSSGLDAAITGSDIDLIALC-- 92
Query: 112 HATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPED 171
A+ F + E + + V A VP++KF ++GV +DLL+A + + P+
Sbjct: 93 SASVNTSLFFQTFPRSAE-GRLQNVVVVTSARVPLIKFSYNGVHVDLLFASVDMRTAPDT 151
Query: 172 LDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI-QNFRTTLRCMRFWAKRRGVYSNV 230
++ +D L ++NG R +I R +P + + LR +++WA +R VY N+
Sbjct: 152 NELLRDDFLSLVSLPCRATVNGIRTILEIRRRLPLLLAAYACVLRAVKYWAAQRQVYGNL 211
Query: 231 AGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----PVLLCAIEEGSLG 286
F G+ A++VAR CQL P A +++ FF +Y W + PV + ++E +
Sbjct: 212 YTFPNGVCLAIMVARACQLCPVADSGVILRFFFSLYVWWLLRDTRIAPVSIVPMDENAAI 271
Query: 287 LQV------WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA 340
+V WD + D L P++ PA P +N+++ V S L++ + E R ++C
Sbjct: 272 ARVPGMPPPWDAVWDAAD---LFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCAL 328
Query: 341 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA------DDLRNWKGWVESRLRQLT 394
+ + + L+ P+ + ++ ++ + IS+E+ + + WKG+VES+LR
Sbjct: 329 VP-----MSYSALWAPYNILDEHRFFVGVHISSEHQSLAACEEAINAWKGYVESKLRMFV 383
Query: 395 LKIERHTYNMLQCHPHPGDFSD--------KSKPLYC---SYFMGLQRKQGVPVGEGEQF 443
+E + + P P D + ++C ++F G++ +
Sbjct: 384 YALE----CVAEVRPFPRPVVDEPPRAVTRRGVTVHCRSRAFFFGVRNGN----NDVAHS 435
Query: 444 DIRLTVKEFKQAVS 457
D+ +EF+ AV+
Sbjct: 436 DVEAAFREFEFAVT 449
>gi|154341292|ref|XP_001566599.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063922|emb|CAM40113.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 417
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 157/315 (49%), Gaps = 34/315 (10%)
Query: 126 MLTEMPEVTE-----LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 180
++P +TE + V A VP++KF + GV +DLL+A + + P+ ++ +D L
Sbjct: 18 FFQKLPRLTEGRLQDVVVVTSARVPLIKFSYKGVHVDLLFASVDMRTAPDTSELLRDDFL 77
Query: 181 QNADEQTVRSLNGCRVTDQILRLVP-KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 239
++NG R +I R +P + ++ LR +++WA +R VY N+ F G+
Sbjct: 78 SLVSLPCRATVNGIRTILEIRRRLPLPLDSYACVLRAVKYWAAQRQVYGNLYTFPNGVCL 137
Query: 240 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRW----PNPVLLCAIEEGSLGLQV------ 289
A++VAR CQ P A +++ FF +Y W +PV + EE + ++V
Sbjct: 138 AIMVARACQFCPVADSGVILRFFFSLYVWWLLRDTRMDPVSIVPKEEDAAIVRVPGMPPP 197
Query: 290 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD 349
WD + D L P++ PA P +N+++ V S L++ E R ++C ++ +
Sbjct: 198 WDAVWDAAD---LFPVLNPAQPTVNAAHAVGRSGLQLFFKELLRAEQLCASVP-----LS 249
Query: 350 WDTLFEPFTFFEAYKNYLRIDISAENA------DDLRNWKGWVESRLRQLTLKIERHTYN 403
+ L++P+ + ++ ++ + IS E+ D + WKG+VES+LR L +E
Sbjct: 250 YSELWKPYNILDEHRFFVGVHISCEHPSLAACEDTINAWKGYVESKLRMLVYSLE----C 305
Query: 404 MLQCHPHPGDFSDKS 418
+ + P P D+S
Sbjct: 306 VAEVRPFPRPVVDES 320
>gi|351712642|gb|EHB15561.1| Poly(A) polymerase gamma [Heterocephalus glaber]
Length = 528
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 90/148 (60%), Gaps = 1/148 (0%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+ +S
Sbjct: 70 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVS 129
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+K L ++ KIFTFGSYRLGVH GADID LCV PRH R DFF + L
Sbjct: 130 ESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKH 188
Query: 130 MPEVTELHPVPDAHVPVMKFKFSGVSID 157
+ L V DA VPV+KF+F G+ ++
Sbjct: 189 QDGIRNLRAVEDAFVPVIKFEFDGIEVN 216
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 295 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 333
NP D+YHLMPIITPAYP NS+YNVSTST +M++EF++
Sbjct: 216 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQ 254
>gi|261265299|gb|ACX55867.1| polyA polymerase [Bubalus bubalis]
Length = 83
Score = 130 bits (328), Expect = 2e-27, Method: Composition-based stats.
Identities = 57/83 (68%), Positives = 65/83 (78%)
Query: 233 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP 292
FLGG++WA+LVAR CQLYPNA+ S LV +FF V +W WPNPVLL EE +L L VWDP
Sbjct: 1 FLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVSPKWEWPNPVLLKQPEECNLNLPVWDP 60
Query: 293 RRNPKDKYHLMPIITPAYPCMNS 315
R NP D+YHLMPIITPAYP NS
Sbjct: 61 RVNPSDRYHLMPIITPAYPQQNS 83
>gi|110740407|dbj|BAF02098.1| poly(A) polymerase like protein [Arabidopsis thaliana]
Length = 348
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 114/214 (53%), Gaps = 6/214 (2%)
Query: 388 SRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQFDIR 446
SR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QFDIR
Sbjct: 1 SRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQFDIR 60
Query: 447 LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRALER 505
TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++ E
Sbjct: 61 GTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKSGED 120
Query: 506 KVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEF--REGSPIMSTISSSSI 563
SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 121 GSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTPPVC 180
Query: 564 NLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 597
NL+ + E N E E LTD R NS
Sbjct: 181 NLRRPPSEEIEADNLNTECTE--LTDLARNECNS 212
>gi|297597453|ref|NP_001043998.2| Os01g0702900 [Oryza sativa Japonica Group]
gi|222619129|gb|EEE55261.1| hypothetical protein OsJ_03164 [Oryza sativa Japonica Group]
gi|255673599|dbj|BAF05912.2| Os01g0702900 [Oryza sativa Japonica Group]
Length = 129
Score = 129 bits (324), Expect = 5e-27, Method: Composition-based stats.
Identities = 64/110 (58%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 150 KFSGVSIDLLYARLSLWVIPEDLDISQ--DSILQNADE-QTVRSLNGCRVTDQILRLVPK 206
+F GV +DL+YA + L P Q S+L+ D+ T RSLNG RV D+ILRLVP+
Sbjct: 2 RFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVPE 61
Query: 207 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 256
FRT LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 62 TAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 111
>gi|294888316|ref|XP_002772423.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239876612|gb|EER04239.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 113
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Query: 233 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEGSLGLQ 288
F GGI WA+LVAR+CQ++PN LV RFF + ++W W NPV LC I E G + +
Sbjct: 1 FFGGITWAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFK 60
Query: 289 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 337
VW+P++ D+ HLMP+ITPA+P MNS+YNV+ +T RI+M E +R H++
Sbjct: 61 VWNPKQYASDRSHLMPVITPAFPSMNSTYNVTETTKRIIMGEIERAHKL 109
>gi|253747873|gb|EET02347.1| Hypothetical protein GL50581_387 [Giardia intestinalis ATCC 50581]
Length = 609
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 160/368 (43%), Gaps = 70/368 (19%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISR-AKGLNDQLLQ--------E 81
L YL+D LY S EEA +E +L L+ I+ WV + + A N Q + E
Sbjct: 39 LLSYLKDCKLYVSPEEARKKEAILRTLELIISDWVYETYKDAFMANMQFYRKQPNMPRSE 98
Query: 82 ANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 141
+++ FGSY LG++ P +D+DT+ V P++ R DFF + ++ +MP+V+ + D
Sbjct: 99 RLVRLYPFGSYYLGINEPSSDVDTVVVFPQYV-RIADFFDKFPTIIGQMPQVSYFDCIRD 157
Query: 142 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR----VT 197
A VP++ + + DL A +++ I + + N E+++ SLNG R V
Sbjct: 158 AKVPLITLTYDSIDFDLSAAVMAVNRITDAIPFLDPECTANMHEKSILSLNGYRTNIHVK 217
Query: 198 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR------------ 245
Q F+ +R +R W+KR+ +YSN GF GGIN +LVA
Sbjct: 218 SQFAGNNAFYNTFQNAVRALRLWSKRKNIYSNRCGFFGGINCIILVANVMLRSTFELLQL 277
Query: 246 --------------------------------ICQLYPNAVPSMLVSRFFRVYTQWRW-- 271
I +L + ++ + + Y++ W
Sbjct: 278 DVEQQNAKHRGSLSDTLINSDTTSYIQYNSDSILELRESVPLTLWLYNIYYYYSRLDWGT 337
Query: 272 -----PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 326
PNPV + S+ Q W R KDK M ++T P NS+ V +T
Sbjct: 338 KAVQLPNPVQASSATRLSMTAQSW--MRRDKDK---MCLLTAVEPYFNSTDKVFETTFDT 392
Query: 327 MMDEFQRG 334
++ F++G
Sbjct: 393 ILTNFRQG 400
>gi|342180300|emb|CCC89777.1| putative polynucleotide adenylyltransferase [Trypanosoma congolense
IL3000]
Length = 356
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 32/297 (10%)
Query: 154 VSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRT 212
+S+D+++ ++L P + DS L T S+NG R T ++ R +P F T
Sbjct: 1 MSVDVVFISVALSQPPTSDQLLDDSFLLQVARDTRPSVNGIRFTFEVRRRLPVPHKVFAT 60
Query: 213 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR-- 270
L+ ++FWA RR VY N+ + G +A++VAR+CQ+ P+ PS+L+ FF YTQW
Sbjct: 61 VLKAVKFWAMRRQVYGNIYTYPNGAVFAIMVARVCQVLPSPYPSVLLRFFFLFYTQWMSR 120
Query: 271 --WPNPVLLCAIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 324
+PV L A E G + GL + W P +N + L P+I+PAYP +N + NV L
Sbjct: 121 HDHISPVYLTATLESRGRIPGLPESWKPAKNECFR-DLFPVISPAYPYVNDASNVGRCGL 179
Query: 325 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENAD------D 378
+ E + + A + + + L+ P+ E + ++L +++S+ D
Sbjct: 180 ESLYSEITQAQRVISASDT----LSLEKLWRPYCIMEDFAHFLLVEVSSLGDDMADAERI 235
Query: 379 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP--------GDFSDKSKPLYCSYFM 427
L W +V S+LR L +ER + PHP G F D+ YF+
Sbjct: 236 LGRWGSYVGSKLRFLIYSVER----FVHARPHPHKLRAKMDGTFVDRKVCCSSIYFL 288
>gi|358333281|dbj|GAA51822.1| poly(A) polymerase [Clonorchis sinensis]
Length = 426
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 138/286 (48%), Gaps = 41/286 (14%)
Query: 156 IDLLYARLSLWVIPEDLDISQD--SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 213
+DL+ +RL+ IP+ LD Q + +N D +VRSL+G + ++ +++ +F
Sbjct: 51 VDLVISRLATSYIPQQLDFEQTPGDLYRNMDAISVRSLSGLHLAHELNKMMFGHAHFLPL 110
Query: 214 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ-LYPNAVPSM--------------- 257
LR +R W + R + S V GF I W ++V IC+ L N+ S
Sbjct: 111 LRVIRTWVRARAIGSYVYGFPASIAWTIMVVYICRRLGDNSQISTFCVCRRSSVCRTSEP 170
Query: 258 --------------------LVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNP 296
LV FF + W WP+PV + +I+ S L + WDP+RN
Sbjct: 171 AAERNSGEESLASRSHALFCLVYTFFAQFASWPWPHPVQIASIKFASDLNIFSWDPQRNA 230
Query: 297 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 356
+D LMPI+TP +P N+++ V +T +I+ DE R +I + + W+ LFE
Sbjct: 231 QDGRDLMPILTPVFPNKNAAFTVRQATRKIVTDELIRARDIVSDVLRGSG--TWEKLFER 288
Query: 357 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY 402
+ + ++++L + + + ++L G ++SRLR L +E Y
Sbjct: 289 YDLRDDHRHFLLLTLQTTSKEELVVVGGLIDSRLRDLAQALEDEQY 334
>gi|300123436|emb|CBK24709.2| unnamed protein product [Blastocystis hominis]
Length = 363
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 159/332 (47%), Gaps = 33/332 (9%)
Query: 142 AHVPVMKFKFSGVSIDLLYARLSLW--VIPEDLDISQDSILQNADEQTVRSLNGCRVTD- 198
+ VP+M + GVS+D+ +A L + +PE LDI + IL+N E T+ SL GCR T+
Sbjct: 6 SFVPIMTMEIDGVSVDISFASLPSYPFKLPEFLDILSNDILRNVSEHTLHSLTGCRCTEF 65
Query: 199 --QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL------- 249
Q LR K+ FR T +RF+ K+ +Y NV G+LGG+N +L+A L
Sbjct: 66 VIQKLRSENKLDIFRQTFFGIRFFTKQYKIYKNVMGYLGGVNITILLASTNLLENDFLTN 125
Query: 250 ---YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 306
+ + V L S + Q +P E + W + + + + ++
Sbjct: 126 TFHFFHFVADHLGSEIIAMTPQLSFP---------ELGFDEENWSDKPSNFSNHDSLVLL 176
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 366
TP YP MN++ +S S+L+ + + +R +E ++ E+ + + EP+ FFE + Y
Sbjct: 177 TPTYPRMNTARTISRSSLQFIRSQARRVYEKIKSYVDGESTL--LQMVEPYQFFEGFPIY 234
Query: 367 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF 426
+ +SA + ++W G VES++R L + N+ +P+P KS ++
Sbjct: 235 FEVLVSASANSEFKDWLGLVESKIRYLVFFLSLRIENV-ALNPNP--IVSKSNSNAACFY 291
Query: 427 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 458
+GL V + + D+ V +F V +
Sbjct: 292 IGLT----VDLTKATTLDLSQCVNDFIDIVRL 319
>gi|76154117|gb|AAX25625.2| SJCHGC06256 protein [Schistosoma japonicum]
Length = 166
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
LG T +S PT+ DL T++LE L +N++E+QEE R E L RL +I W+++
Sbjct: 21 LGETGALSFKKPTEQDLKDTQELEASLAQLNIFETQEEISQRREALVRLQEISNGWIRQK 80
Query: 69 SRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
+ + L + KIFTFGSYRLGV+ GADID+L V PR TREE FF + +L
Sbjct: 81 ALEQNLPTHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITREE-FFSDFQTVLA 139
Query: 129 EMPEVTELHPVPDAHVPVMKFKF 151
E P V +LH V DA VPV+K KF
Sbjct: 140 ENPNVEDLHAVVDAFVPVLKMKF 162
>gi|125527403|gb|EAY75517.1| hypothetical protein OsI_03421 [Oryza sativa Indica Group]
Length = 129
Score = 125 bits (315), Expect = 7e-26, Method: Composition-based stats.
Identities = 63/110 (57%), Positives = 76/110 (69%), Gaps = 3/110 (2%)
Query: 150 KFSGVSIDLLYARLSLWVIPEDLDISQD--SILQNADE-QTVRSLNGCRVTDQILRLVPK 206
+F GV +DL+YA + L P Q S+L+ D+ T SLNG RV D+ILRLVP+
Sbjct: 2 RFRGVQVDLVYAGVCLPWCPTTWSGPQRDRSVLRGLDDLATAHSLNGIRVADEILRLVPE 61
Query: 207 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 256
FRT LRC+ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 62 TAMFRTMLRCVNHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 111
>gi|308160310|gb|EFO62803.1| Poly(A) polymerase, putative [Giardia lamblia P15]
Length = 617
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 200/489 (40%), Gaps = 107/489 (21%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGL-NDQLLQ--------E 81
L YL+D LY S EE +E +L L+ I+ WV + + L N Q + E
Sbjct: 39 LLSYLKDCKLYVSPEETRKKEAILRNLELIISDWVYETYKDAFLANMQFYRKQPNMPRSE 98
Query: 82 ANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 141
+++ FGSY LG++ P +D+DT+ + P++ R DFF + ++ +MP+V+ + D
Sbjct: 99 RLVRLYPFGSYYLGINEPSSDVDTVVIFPQYV-RIVDFFDKFPTIIGQMPQVSYFDCIRD 157
Query: 142 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR----VT 197
A VP++ + V DL A +++ + + + N E+++ SLNG R V
Sbjct: 158 AKVPLITLTYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRTNIHVK 217
Query: 198 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR------------ 245
Q F+ +R +R W KR+ +YSN GF GGIN +LVA
Sbjct: 218 SQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCIILVANVMLRSSFELLQS 277
Query: 246 -------------------------------------ICQLYPNAVPSMLVSRFFRVYTQ 268
I +L + ++ + + Y++
Sbjct: 278 DVEQKNMEYQLSSSITQNDPTNPSDLQSPYIQYNSDSILELRESVPLTLWLYNIYYYYSR 337
Query: 269 WRW-------PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 321
W PNPV A S+ Q W R KDK M ++T P NS+ +
Sbjct: 338 LDWSTKAIQLPNPVQASAATRLSMTAQSW--IRRDKDK---MCLLTAVEPYFNSTDKIFE 392
Query: 322 STLRIMMDEFQRG-HEICEAMEKNEADVD--------------WDTLF--EPFTFFE--A 362
+T ++ F+ G I + + A WDT F + FF
Sbjct: 393 TTFDTILANFRHGVKAILDIVRGVVAAYSFGLEIARPLLRPSLWDTFFYDDSLEFFSNPG 452
Query: 363 YK---NYLRID---ISAENADDLRNWKGWVESRL----RQLTLKIERHTYN---MLQCHP 409
Y+ YL I +S+ + +L K ++ESR+ R+L ++ N +++ HP
Sbjct: 453 YRPNIMYLLITRNVMSSNSMVELDKVKSFLESRINRICRRLLTNLQPAVGNNARLIRVHP 512
Query: 410 HPGDFSDKS 418
P + S
Sbjct: 513 LPTWYDSTS 521
>gi|317156627|ref|XP_001825892.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
Length = 1195
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 190/425 (44%), Gaps = 45/425 (10%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFG 90
L+ +L+ + S EE R+E + ++V + + G LL E + G
Sbjct: 589 LKGWLKGYLAFPSNEEITQRQEAFELIKELVN--RRDANLPAGTRLDLLFE----VVPVG 642
Query: 91 SYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAHVPVMK 148
SY GV +D+D L +G FF + L +V L V A +++
Sbjct: 643 SYGFGVWNSSSDMDILVIG---QVSPRTFFALMIAKLRRATDSDVVLLRKVKAASGIMLE 699
Query: 149 FKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 206
+ GV +DL Y + V P+ L++ D + Q++ LN R + R +P
Sbjct: 700 LEVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPD 759
Query: 207 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRF 262
+ +FR R ++ WA+RRG+YS+ G+LGGI+ LL+ARIC L ++ +++ F
Sbjct: 760 LASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADIITTF 819
Query: 263 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 322
F+ Y Q+ W V+ S + + P+R P + I++ P +N + S
Sbjct: 820 FKHYAQFNWEKQVVYDPSFYKS-PPRYFRPQREP------LVILSQHQPKVNVARAASIP 872
Query: 323 TLRIMMDEFQRGHEICEAMEKNEADVDWDTL---FEPFT----FFEAYKNYLRIDIS--A 373
+ R ++ EFQR ++ ++ DV W+ L E T F ++Y++Y ++++
Sbjct: 873 STRTLVQEFQRADKLL-----SQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVNVQYWG 927
Query: 374 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD------KSKPLYCSYFM 427
A R GW+E R L + I R + + P F+D +K Y +
Sbjct: 928 GAATKGRMLVGWLEWRCVSLLVDIHRK-FPDIHARIWPARFTDMEEVGETTKEYQGCYLI 986
Query: 428 GLQRK 432
GL R+
Sbjct: 987 GLTRE 991
>gi|159109295|ref|XP_001704913.1| Hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
gi|157432988|gb|EDO77239.1| hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
Length = 674
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 14/229 (6%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGL-NDQLLQ--------E 81
L YL++ LY S EE +E +L L+ I+ WV + + L N Q + E
Sbjct: 96 LLSYLKNCKLYVSSEETRKKEAILRNLELIISDWVYETYKDAFLANMQFYRKQPNMPRSE 155
Query: 82 ANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 141
+++ FGSY LG++ P +D+DT+ + P++ R DFF + ++ +MP+V+ + D
Sbjct: 156 RLVRLYPFGSYYLGINEPSSDVDTVVIFPQYV-RIADFFDKFPTIIGQMPQVSYFDCIRD 214
Query: 142 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR----VT 197
A VP++ + V DL A +++ + + + N E+++ SLNG R V
Sbjct: 215 AKVPLITLTYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRTNIHVK 274
Query: 198 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
Q F+ +R +R W KR+ +YSN GF GGIN +LVA +
Sbjct: 275 SQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCIILVANV 323
>gi|238492513|ref|XP_002377493.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
gi|220695987|gb|EED52329.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
Length = 1297
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 190/425 (44%), Gaps = 45/425 (10%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFG 90
L++ L+ + S EE R+E + ++V + + G LL E + G
Sbjct: 589 LKECLKGYLAFPSNEEITQRQEAFELIKELVN--RRDANLPAGTRLDLLFE----VVAVG 642
Query: 91 SYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAHVPVMK 148
SY GV +D+D L +G FF + L +V L V A +++
Sbjct: 643 SYGFGVWNSSSDMDILVIG---QVSPRTFFALMIAKLRRATDSDVVLLRKVKAASGIMLE 699
Query: 149 FKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 206
+ GV +DL Y + V P+ L++ D + Q++ LN R + R +P
Sbjct: 700 LEVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPD 759
Query: 207 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRF 262
+ +FR R ++ WA+RRG+YS+ G+LGGI+ LL+ARIC L ++ +++ F
Sbjct: 760 LASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADIITTF 819
Query: 263 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 322
F+ Y Q+ W V+ S + + P+R P + I++ P +N + S
Sbjct: 820 FKHYAQFNWEKQVVYDPSFYKS-PPRYFRPQREP------LVILSQHQPKVNVARAASIP 872
Query: 323 TLRIMMDEFQRGHEICEAMEKNEADVDWDTL---FEPFT----FFEAYKNYLRIDIS--A 373
+ R ++ EFQR ++ ++ DV W+ L E T F ++Y++Y ++++
Sbjct: 873 STRTLVQEFQRADKLL-----SQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVNVQYWG 927
Query: 374 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD------KSKPLYCSYFM 427
A R GW+E R L + I R + + P F+D +K Y +
Sbjct: 928 GAATKGRMLVGWLEWRCVSLLVDIHRK-FPDIHARIWPARFTDMEEVGETTKEYQGCYLI 986
Query: 428 GLQRK 432
GL R+
Sbjct: 987 GLTRE 991
>gi|440789896|gb|ELR11187.1| EGFlike domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 904
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 150/347 (43%), Gaps = 47/347 (13%)
Query: 93 RLGVHG-PGADIDTLC---------VGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 142
R G HG P +D +C +G A F + P T H + A
Sbjct: 559 RCGEHGTPNSDGTCVCRDYYAASTELGRGVAVNGSIAFNGWAYFHLKTPGNTGTHSI-QA 617
Query: 143 HVPVMKFKFSGVSIDL-LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 201
H+ + S V DL LYA L W D D S + Q + S++ T +
Sbjct: 618 HLATFE---SYVDGDLWLYASLDGWPTLRDYDKSDTRM-----GQAIHSISYIATTQPFV 669
Query: 202 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ---LYPNAVPSM- 257
I F G+YSN GFLGG +W++LVA +C+ LY + +
Sbjct: 670 SQEVFIGVFAGPYSLPTNNFIIAGLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAAS 729
Query: 258 ----------LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 307
L++ FF VY W W PV AI GS R P K MPI+T
Sbjct: 730 GDGDLSIEERLLAEFFEVYNHWDWQQPV---AITPGS-------ARYKPGHKSDKMPIVT 779
Query: 308 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 367
P P NS+ NV+ STL M EF R +I +A + N ++ + L +P FF+ Y YL
Sbjct: 780 PTPPFNNSARNVARSTLTEMQQEFFRAFDITQAPQWN-SEAGLNDLLQPTNFFKDYHYYL 838
Query: 368 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
+++ + ++D++ GW+ESRL L +E++ + P PG F
Sbjct: 839 MVEVHSLSSDEVTKCLGWLESRLIALIFDLEKNPQTYAR--PFPGTF 883
>gi|308507393|ref|XP_003115880.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
gi|308256415|gb|EFP00368.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
Length = 311
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 100/216 (46%), Gaps = 56/216 (25%)
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
+ LNG RV +Q+L VP F +LR ++ WAK GVYSN GF GGI WA+LVAR CQ
Sbjct: 70 KILNGIRVAEQLL--VPNRDTFCQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVARTCQ 127
Query: 249 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
LYPNA PS ++ + F V++ W WP+PV+L
Sbjct: 128 LYPNAAPSKIIQKVFLVFSTWNWPSPVIL------------------------------K 157
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
+ C++S +TL I+ E + +IC ++K A W+ L F F
Sbjct: 158 HFDCVDSK-----TTLHIIQKEMKAALKICNRIQKGNA--TWNDLANWFRFSRGIG---- 206
Query: 369 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNM 404
I ENA +L LTLKIE NM
Sbjct: 207 -KIFMENAKNL------------DLTLKIEGFKRNM 229
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK-- 66
LG+ +PISL P +D+ + L +YL+ +ES+EEA R L +L+ +VK W+K
Sbjct: 2 LGVPQPISLDTPNKNDISLSNSLNEYLKQSKCFESKEEASQRVNTLSKLNLLVKKWIKSL 61
Query: 67 ---KISRAKGLN 75
+IS K LN
Sbjct: 62 IDVRISNGKILN 73
>gi|402576343|gb|EJW70302.1| hypothetical protein WUBG_18790, partial [Wuchereria bancrofti]
Length = 79
Score = 116 bits (291), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/76 (61%), Positives = 59/76 (77%)
Query: 194 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 253
CRV D+ILRLVP I NF LR ++ WAK G+YSNV G+LGG++WA+LVAR CQLYPN
Sbjct: 1 CRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNT 60
Query: 254 VPSMLVSRFFRVYTQW 269
P+ LV +FF +YT+W
Sbjct: 61 GPARLVQKFFLLYTKW 76
>gi|349603143|gb|AEP99064.1| Poly(A) polymerase gamma-like protein, partial [Equus caballus]
Length = 435
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 113/194 (58%), Gaps = 13/194 (6%)
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
D+YHLMPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP
Sbjct: 1 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPP 58
Query: 358 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDF 414
FF+ Y++Y+ + SA ++ W G VES++R L +ER+ + + +P PG+
Sbjct: 59 NFFQKYRHYIVLTASASTEENHSEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNK 118
Query: 415 SDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQI 468
Y S +F+G+ ++ V E D+ ++ F +QA ++ L++ GM+I
Sbjct: 119 EHHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKE-GMKI 176
Query: 469 SVAHVTRRNLPNFV 482
HV ++ L +++
Sbjct: 177 EATHVKKKQLHHYL 190
>gi|340959918|gb|EGS21099.1| hypothetical protein CTHT_0029400 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1213
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 181/417 (43%), Gaps = 61/417 (14%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFG 90
+EK L + + SQEE +R++ + L + V + GL+ +A I G
Sbjct: 613 VEKALIQLGVIPSQEEEATRKQAVDLLRNTITD-VIASTVPSGLSRF---QAPIVIVPVG 668
Query: 91 SYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP--EVTELHPVPDAHVPVMK 148
SY LGV +D+D LC+GP A + FF + + L ++P ++ + V +++
Sbjct: 669 SYGLGVWTSSSDLDVLCIGPFSA---QTFFALVTRALRKVPPQDIKIIRRVRANTGTMLE 725
Query: 149 FKFSGVSIDLLYARLSLWVIPED----LDISQDSILQNADEQTVRSLNGCRVTDQILRLV 204
+ G+ DL + I E L + + + + Q++ L R D + R V
Sbjct: 726 LEIHGIKTDLQCCPAT--TIAERWGDVLRTAPNDPVWDLSPQSLLKLKAVRDMDYLRRTV 783
Query: 205 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN--------AVPS 256
P I+ FR R +R WAK RGVY++ GFL GI A+LVAR+ +L N V
Sbjct: 784 PNIRVFRAANRAIRAWAKARGVYTSRFGFLSGIQIAILVARVAKLLANNPDVKTPITVED 843
Query: 257 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP----RRNPKDKYHLM-PIITPAY- 310
LV+ FF Y + W + +DP R P ++ PI Y
Sbjct: 844 FLVT-FFTHYASFPWSTHL-------------AFDPFFHRNRLPYNRVPFREPIAILGYF 889
Query: 311 -PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT----------F 359
P +N++ S S+ R + DEF+R EA+ DW F T F
Sbjct: 890 PPALNTAAAASPSSARTLADEFRRA---GEALVSGNV-TDW-AFFLSGTGSNGTTGVQEF 944
Query: 360 FEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
AYK Y+R+D S R + GW+ESRL L + I R T +L P F
Sbjct: 945 LSAYKTYIRLDASYWGLSRSRGSQFLGWLESRLVSLLVDISRRTNGVLHARIWPARF 1001
>gi|308482424|ref|XP_003103415.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
gi|308259836|gb|EFP03789.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
Length = 388
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+++PIS PT D T L + L YES+EE+++R +VL +L+ +VK W+K ++
Sbjct: 11 GVSQPISTNAPTKSDFKLTDSLNESLHQFECYESKEESMTRIKVLSKLNALVKQWIKTLT 70
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
+ N L A K+ +FGSYRLGVH GADID L + PRH R DFF +ML E
Sbjct: 71 AQRIPNGHELN-AGGKLISFGSYRLGVHNSGADIDALVIAPRHVAR-LDFFTSFKKMLLE 128
Query: 130 MPEVTELHPVPDAHVPVM 147
V L V +A VP+M
Sbjct: 129 NSSVKNLACVENAFVPIM 146
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 21/205 (10%)
Query: 289 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 348
VWDPR N D++HLMPIITPA+P NS++NVS STL I+ +E + IC+ + A
Sbjct: 156 VWDPRINYSDRFHLMPIITPAFPEQNSTHNVSKSTLHIIQEEMKSALLICDQIHAGSA-- 213
Query: 349 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 408
W+ LFE FF Y++++ + ++ E+ + G+ ESR+RQL +ER+ L H
Sbjct: 214 TWNNLFEEVNFFSRYRHFVALSMNEESNE------GFFESRIRQLVQIMERNCQVKL-AH 266
Query: 409 PHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQI 468
+P F KS +F+GL+ + V + D+ ++ FK+ V + G+QI
Sbjct: 267 INPKKF--KSVQNASVWFLGLELIENV-----KNLDLTAEIEGFKKNVEK---QANGIQI 316
Query: 469 SV--AHVTRRNLPNFVFPGGVRPSR 491
++ +V R L ++ ++ R
Sbjct: 317 TLDATYVKRSGLIKWIPVADLKKGR 341
>gi|334121414|ref|ZP_08495483.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
gi|333455032|gb|EGK83696.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
Length = 1034
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 159/359 (44%), Gaps = 55/359 (15%)
Query: 89 FGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 148
GS R+GV +D+D +C+ P T E F ++ L + + ++L V A VPV++
Sbjct: 635 IGSGRIGVQSTHSDLDLICIIPVPLT-GETFLKQVQNRLAGLCDRSQL--VKSARVPVLR 691
Query: 149 FKFSGVSIDLLYAR-LSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV-PK 206
+ GV++DLL A + I E L + D + + G D I+ +V P
Sbjct: 692 MEIEGVAVDLLSATTMGQSQIIEPLSEAARPFF---DAASWSAAVGILEADLIVDIVSPH 748
Query: 207 IQ--NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA--------------RICQ-- 248
+ F LR +R WAK R ++ N GFLG +WALL A R+
Sbjct: 749 LSWDLFTNLLRAVRTWAKARQIHGNAWGFLGNFSWALLTAWTSIQCGDITPDSPRLLHSQ 808
Query: 249 ---------------LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 293
L + + +L++ FF++ +Q W P+ A+ EG G Q P
Sbjct: 809 ENDGFVGAVSPCPPCLRDDQLLDILLAHFFQILSQHDWTQPI---ALTEG--GKQY--PV 861
Query: 294 RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL 353
R ++ + P+IT PC NS+ NV+ ST I+ E RG EI E E + W TL
Sbjct: 862 RKSREWF---PVITSIEPCQNSTRNVTRSTAEILRRELGRGAEIAE--EVLAGNTAWTTL 916
Query: 354 FEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG 412
FE E +L + +S+ +L GW+E L + +E+ + P PG
Sbjct: 917 FESADLPEQSNAFLVLTVSSAEVGELEKCGGWLEGNTIGLAINLEQKLN--IHVRPRPG 973
>gi|212536855|ref|XP_002148583.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
gi|210068325|gb|EEA22416.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
Length = 1206
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 177/404 (43%), Gaps = 53/404 (13%)
Query: 35 LRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRL 94
L D ++ S+ E R+++ + VK +A G + + + + GSY
Sbjct: 599 LHDFDMLPSEVEIAHRQQMFELIRSAVK------QQAIGTSVETRLNISFVVVPVGSYAS 652
Query: 95 GVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH---PVPDAHVPVMKFKF 151
GV P +DID L +G + + F + Q L PE E+H V +++ +
Sbjct: 653 GVWDPSSDIDCLVIG---SISPKTFMALMVQKL-RRPEWQEIHILRKVKATSGTMLEIQA 708
Query: 152 SGVSIDLLYARLSL----WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI 207
GV DL Y + W P+ L + + Q++ LN R + + R +P +
Sbjct: 709 GGVRFDLQYCAATSVTDSW--PKALTLPSSDPTFDLPMQSLLKLNSHRDLEYLQRTIPDL 766
Query: 208 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV----PSMLVSRFF 263
FR R ++ WAK RG+YS+ G+LGGI+ LL+AR+C+L S ++S FF
Sbjct: 767 ATFRKAYRFIKAWAKFRGIYSSKLGYLGGIHITLLLARVCKLSFREAGATSVSDIISDFF 826
Query: 264 RVYTQWRWPNPVLL-CAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPAYPCMNSSY 317
Y + W N ++ G+ KYH M I++ P +N ++
Sbjct: 827 FYYENFDWKNDMVYETTFYTGT-------------PKYHRLSREPMVILSIHPPKVNVAH 873
Query: 318 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP---FTFFEAYKNYLRIDIS-- 372
+ S++ + EF+R ++ +E W + +P F EAY +Y+++D+
Sbjct: 874 ASTVSSVHTLEQEFKRAAQLI-----SEVGATWKNIADPSGVVQFLEAYSSYIKVDVHYW 928
Query: 373 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
A+ A R GW+E R L + I R + + P F+D
Sbjct: 929 AKAAAKGRALFGWLEFRCVSLLVNINR-GFPDIHARIWPARFTD 971
>gi|391865116|gb|EIT74407.1| hypothetical protein Ao3042_09684 [Aspergillus oryzae 3.042]
Length = 973
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 172/376 (45%), Gaps = 38/376 (10%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFG 90
L++ L+ + S EE R+E + ++V + + G LL E + G
Sbjct: 589 LKECLKGYLAFPSNEEITQRQEAFELIKELVN--RRDANLPAGTRLDLLFE----VVPVG 642
Query: 91 SYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAHVPVMK 148
SY GV +D+D L +G FF + L +V L V A +++
Sbjct: 643 SYGFGVWNSSSDMDILVIG---QVSPRTFFALIIAKLRRATDSDVVLLRKVKAASGIMLE 699
Query: 149 FKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 206
+ GV +DL Y + V P+ L++ D + Q++ LN R + R +P
Sbjct: 700 LEVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPD 759
Query: 207 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRF 262
+ +FR R ++ WA+RRG+YS+ G+LGGI+ LL+ARIC L ++ +++ F
Sbjct: 760 LASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADIITTF 819
Query: 263 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 322
F+ Y Q+ W V+ S + + P+R P + I++ P +N + S
Sbjct: 820 FKHYAQFNWEKQVVYDPSFYKS-PPRYFRPQREP------LVILSQHQPKVNVARAASIP 872
Query: 323 TLRIMMDEFQRGHEICEAMEKNEADVDWDTL---FEPFT----FFEAYKNYLRIDIS--A 373
+ R ++ EFQR ++ ++ DV W+ L E T F ++Y++Y ++++
Sbjct: 873 STRTLVQEFQRADKLL-----SQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVNVQYWG 927
Query: 374 ENADDLRNWKGWVESR 389
A R GW+E R
Sbjct: 928 GAATKGRMLVGWLEWR 943
>gi|449673865|ref|XP_004208051.1| PREDICTED: poly(A) polymerase alpha-like, partial [Hydra
magnipapillata]
Length = 144
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVK 66
++ GIT PI+L+GP + D T+ LE+ L+D ++E+QE+ R VL +L+++ W+
Sbjct: 15 KQYGITSPINLSGPKEIDEELTKSLEETLKDYGVFETQEQIQHRMVVLEKLNKLALEWIV 74
Query: 67 KISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQM 126
K S AK + + + KIFTFGS+RLGVH GADIDTL V PRH R DFFG ++
Sbjct: 75 KTSIAKNMPESVANSVGGKIFTFGSFRLGVHTKGADIDTLLVAPRHIER-ADFFGSFYEF 133
Query: 127 LTEMPEVTEL 136
L E +L
Sbjct: 134 LKNREETKDL 143
>gi|115401228|ref|XP_001216202.1| predicted protein [Aspergillus terreus NIH2624]
gi|114190143|gb|EAU31843.1| predicted protein [Aspergillus terreus NIH2624]
Length = 1168
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 178/406 (43%), Gaps = 43/406 (10%)
Query: 30 KLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTF 89
+L + L D N + S EE R+EV+ + Q+V R L + +
Sbjct: 559 QLMQSLWDHNAFPSPEEIRQRQEVVDLIRQVVN------QRDPNLPTDTRLRFSFAVVPV 612
Query: 90 GSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAHVPVM 147
GSY LGV +DID L +G A FF + L + E+ L V A ++
Sbjct: 613 GSYGLGVWNSSSDIDLLVIGQLSA---RTFFALMVAKLRKAIHGEIKILRKVKAASGVML 669
Query: 148 KFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 205
+ + GV +DL Y S V P+ LD+ D +++ LN R + R +P
Sbjct: 670 ELEARGVRVDLQYCAASRVVESWPQALDLPDDDSAFYLPMRSLLKLNPLRDMHYLQRTIP 729
Query: 206 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL-YPNAVP---SMLVSR 261
+ FR+ R ++ WA+RRGVYS G+LGGI+ LL++ +C+L + A P + ++
Sbjct: 730 DLATFRSAYRFIKTWAQRRGVYSAKLGYLGGIHITLLLSSVCKLSFQKAGPLSAADMICT 789
Query: 262 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 321
FFR Y Q++W ++ G PR + ++ I+T P +N + S
Sbjct: 790 FFRHYAQFQWDRTIVY------DPGFYKTAPRYFRTSREPIV-ILTQNTPKVNVARAASL 842
Query: 322 STLRIMMDEFQRGHEICEAMEKNEA--DVDWDTLFEPF-------TFFEAYKNYLRIDIS 372
+ R + EF+R M++ A ++ W L F +Y +Y ++++
Sbjct: 843 PSARTLEQEFKR-------MDRQLASPEITWAGLLGAAGSSSGVEDFLTSYPSYAKVNVQ 895
Query: 373 --AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 416
A R GW+E R L + I+R + L P F+D
Sbjct: 896 YWGAGAAKGRLLVGWLEWRCVSLLVDIQRR-FPDLHARIWPARFTD 940
>gi|124003256|ref|ZP_01688106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
gi|123991354|gb|EAY30785.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
Length = 982
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 149/319 (46%), Gaps = 25/319 (7%)
Query: 88 TFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVM 147
FGS L + +DID LC P + + FF +L L+++ + +H V DA V +
Sbjct: 627 VFGSELLKIAQAHSDIDVLCPLPP-SLALDPFFDQLQTALSQVAQ--GVHLVTDARVTTL 683
Query: 148 KFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI 207
KF GV+ DLL + +P L + Q D + +++ G +IL L K+
Sbjct: 684 KFNLQGVNFDLLAVHHPSFPVP--LHQVKPEAFQQFDPLSWQNMVGYLEGQKILALGNKV 741
Query: 208 QN--FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-QLYPNAVPSM--LVSRF 262
FR +R +R WA R+ + NV GF G I+WA+L A C P++ L+ F
Sbjct: 742 GQTLFRDLVRTIRLWAARKQLTGNVFGFFGNISWAILAAWSCAHCQTKHTPTLEHLLQNF 801
Query: 263 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 322
F + Q W P+ ++EG+ V R +D MP+++ YP N++ N++ S
Sbjct: 802 FDLLAQHSWVIPI---GLQEGTSSYIV----RKHRD---WMPVVSAFYPYKNTTRNLTQS 851
Query: 323 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 382
T +++ E Q+ + + ++W T F + Y L +++SA N +L
Sbjct: 852 TAKVIQGEIQKARLLLQ-----NTSINWLTFFAATDVQKEYTQLLILELSASNEQNLELA 906
Query: 383 KGWVESRLRQLTLKIERHT 401
+G + L + L +E+
Sbjct: 907 QGKLLGSLLGVILALEQQV 925
>gi|7108953|gb|AAF36552.1|AF201910_1 polyA polymerase [Trypanosoma cruzi]
Length = 304
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 71 AKGLNDQLLQEAN---AKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML 127
A L DQ+ E + + FGS LG +D+D + T E FF E +L
Sbjct: 50 AHRLVDQITAEPEERWVRAYPFGSCGLGASVADSDLDIVLFCSFKVT-AEVFFREFPPLL 108
Query: 128 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 187
P V + VP A VPV+KF +SG S+D+++ +L P + DS L T
Sbjct: 109 --QPVVGNVVLVP-ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVARDT 165
Query: 188 VRSLNGCRVTDQILRLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 246
S+NG R ++ R +P + F T L+ ++ WA RR VY N+ + G+ A++VARI
Sbjct: 166 RHSVNGLRTVLEVKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMVARI 225
Query: 247 CQLYPNAVPSMLVSRFFRVYTQW 269
CQ+ P + P++L+ FF YTQW
Sbjct: 226 CQVMPASHPNVLLRFFFLFYTQW 248
>gi|355709241|gb|AES03526.1| poly polymerase alpha [Mustela putorius furo]
Length = 358
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 23/198 (11%)
Query: 295 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 354
NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LF
Sbjct: 2 NPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLF 59
Query: 355 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHP 409
E FF+ YK+Y+ + SA W G VES++R L +E++ + L Q P
Sbjct: 60 EAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP 119
Query: 410 HPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVS--MYT 460
P + DK + + +GL K+ E + LT ++ F +QA++ M+
Sbjct: 120 APKENPDKEE-FRTMWVIGLVFKK---TENSENLSVDLTYDIQSFTDTVYRQAINSKMFE 175
Query: 461 LRKPGMQISVAHVTRRNL 478
+ M+I+ HV R+ L
Sbjct: 176 V---DMKIAAMHVKRKQL 190
>gi|211909028|gb|ACJ12807.1| poly(A) polymerase alpha [Bubalus bubalis]
Length = 108
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Query: 289 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 348
VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A
Sbjct: 1 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA-- 58
Query: 349 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 398
+W LFE FF+ YK+Y+ + SA W G VES++R L +E
Sbjct: 59 EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLE 108
>gi|402083981|gb|EJT78999.1| hypothetical protein GGTG_04090 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1263
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 188/472 (39%), Gaps = 78/472 (16%)
Query: 12 TEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRA 71
EP +G +D + L L + + +++EA R+E L ++
Sbjct: 605 VEPRKASGALED----VQLLRDSLSALGAFPTEDEAARRQEAFELLRDLILENPTGTEVT 660
Query: 72 KGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP 131
G + + + GSY LGV P +DID +C+GP + F L
Sbjct: 661 DGASAAARPRPPLVVTSVGSYGLGVWTPSSDIDVMCIGPYSSA----VFMALAVQRIRKA 716
Query: 132 EVTELHPVPDAHV---PVMKFKFSGVSIDLLYARLSL----WVIPEDLDISQDSILQNAD 184
V +++ + GV +DL Y + W P LD + +
Sbjct: 717 GARGFKLVRRVRANTGTMLELEVQGVKMDLQYCAATSVAEGW--PAVLDRPASDPVFSLP 774
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
QT+ L R D + R +P + FR R +R WA+ RG+YS G+LGGI ++L+A
Sbjct: 775 AQTLGKLKAARDLDYLRRSLPDLAKFRLAHRAVRTWARTRGIYSVRFGYLGGIQISVLLA 834
Query: 245 RICQ-LYPNAVPSMLVS----RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP-RRNPKD 298
R+C+ L +A P + V+ FF Y + W + +DP N K
Sbjct: 835 RVCKSLARDAGPGLSVADILVTFFHHYAAFDWQQNL-------------AFDPFFHNKKL 881
Query: 299 KYHL-----MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL 353
YH + I+ P +N+S+ + ++R M EF+R + + DV WD
Sbjct: 882 SYHRTFREPLAILGFFPPMLNTSHAATIPSVRAMAGEFRRAAALLAS-----EDVTWDAF 936
Query: 354 FE---PFT---------------FFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQL 393
F P T F +YK+++++++S R + GW ESR +
Sbjct: 937 FRGGGPTTVPGPLSATLPSGAADFLASYKSFVKLELSYWGISLPRGAQFVGWFESRCPLI 996
Query: 394 TLKIERHTYNML-QCHPH-----------PGDFSDKSKPLYCSYFMGLQRKQ 433
+ + R N+L + P GD + + Y +GL+ +Q
Sbjct: 997 LVDVSRRLPNVLARMWPERFVDAAAAAASAGDGQESDREYQGCYLVGLEHQQ 1048
>gi|242810869|ref|XP_002485671.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218716296|gb|EED15718.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 1206
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 173/391 (44%), Gaps = 40/391 (10%)
Query: 30 KLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTF 89
+ + L +N+ S+EE R ++ ++ V V + LN + +
Sbjct: 594 QFKTLLYGLNMIPSEEEFAHRHQMFKLIESAVHQRVFDATVETRLNISFV------VVPV 647
Query: 90 GSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH---PVPDAHVPV 146
GSY LGV +DID L +G F + Q L PE E+H + A +
Sbjct: 648 GSYGLGVWDTSSDIDCLVIG---TISPRTFMALMVQKL-RRPEWQEIHILRKIKAASGTM 703
Query: 147 MKFKFSGVSIDLLYARLSL----WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 202
++ + GV DL Y + W P+ L++ + Q++ LN R + + R
Sbjct: 704 LELQAGGVGFDLQYCAATSVAESW--PKALELPSSDSTFDLPMQSLLKLNAVRDLEYLQR 761
Query: 203 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL----YPNAVPSML 258
+P + FR R ++ WAK RG+YS+ G+LGGI+ LL+A +C+L S +
Sbjct: 762 TIPDLATFRKAYRFIKAWAKCRGIYSSKLGYLGGIHITLLLALVCKLSFRESGATHESDI 821
Query: 259 VSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYN 318
+ FF Y + W N ++ +P+ + + L+ I++ P +N ++
Sbjct: 822 LCTFFSYYAHFDWKNDLVY------DTTYYTVEPKYHRSSREPLV-ILSIHPPKVNVAHA 874
Query: 319 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP---FTFFEAYKNYLRIDIS--A 373
+ +++ + +EF R + + ++A V W+ + + F AY +Y+++D+ A
Sbjct: 875 STVPSVKTLEEEFDRANRLI-----SKAGVSWEDIAGQTGIYQFLNAYPSYIKVDVQYWA 929
Query: 374 ENADDLRNWKGWVESRLRQLTLKIERHTYNM 404
+ R GW+E R L + I R N+
Sbjct: 930 KAVAKGRALFGWLEFRCVSLLVDINRRFANV 960
>gi|385300970|gb|EIF45209.1| poly polymerase [Dekkera bruxellensis AWRI1499]
Length = 122
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
M S+ + G+T P+S+A P+ +++ + + LR+ N +E+++ R +VL L I
Sbjct: 1 MNSTQPKHYGVTPPVSIASPSPEEVKMNDAMIEELRNQNSFETEDGVQKRRKVLATLQTI 60
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
V+ +V +SR K +++ + ++A K+FTFGSYRLGV+GPG+DIDTL V P+H T+ EDFF
Sbjct: 61 VQEFVYTVSRKKNMSEGMSKDAGGKLFTFGSYRLGVYGPGSDIDTLVVVPKHVTK-EDFF 119
>gi|327293125|ref|XP_003231259.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
gi|326466375|gb|EGD91828.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
Length = 1216
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 188/448 (41%), Gaps = 74/448 (16%)
Query: 23 DDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEA 82
D L ++ L D ++ +E+ SR+ V+ L QI+ + S + + L+
Sbjct: 593 DTLSSLDEIVSSLEDSSILPGEEDFKSRKTVVATLSQILTEPIHD-SSGRDIKTPLV--- 648
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVP 140
+ GSY LG GP +D+D LC+G A FF Q L + + V
Sbjct: 649 ---LIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRRASALGIRIVRKVK 702
Query: 141 DAHVPVMKFKFSGVSIDLLYARLS----LWV----IPEDLDISQDSILQNADEQTVRSLN 192
A +++ + + +DL Y + W IP S D I + ++ L
Sbjct: 703 AATGIMLELQSGHIKLDLQYCPAANIAERWQEVSRIP-----SHDPIF-DLSLHSLSKLQ 756
Query: 193 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL--- 249
R + I R+VP + FR RC+ WAK GVYS+ G LGGI+ +++ R+ QL
Sbjct: 757 PYRDQEYIKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLCRLHQLIHE 816
Query: 250 -YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 308
+ LV+ FF Y + W N +++ S G+Q RR+ ++ M I+T
Sbjct: 817 KFGRVTVPELVAMFFHHYAHFDWKNNMVV------SPGVQT-RYRRSLREP---MVILTV 866
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT---------- 358
P +N + V+T +LR ++ F+R E+ E W + +
Sbjct: 867 HAPTINVARAVTTPSLRTIVSAFKRAEELM-----GEDGAKWSNILNDISISHNNQTGAE 921
Query: 359 -FFEAYKNYLRIDI-----SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG 412
F AYK+Y+++++ S A L GW+ESR +L ++R + P
Sbjct: 922 KFLAAYKSYIKVNVQYWGPSPTQASSL---IGWLESRFFRLLNDLDRQVLG-IHGRIWPA 977
Query: 413 DFSDKSKP---------LYCSYFMGLQR 431
F+ P Y +GL+R
Sbjct: 978 RFTSIDAPDSENDGETEYQGCYLVGLER 1005
>gi|115448957|ref|NP_001048258.1| Os02g0771500 [Oryza sativa Japonica Group]
gi|113537789|dbj|BAF10172.1| Os02g0771500, partial [Oryza sativa Japonica Group]
Length = 91
Score = 107 bits (267), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/65 (70%), Positives = 53/65 (81%)
Query: 192 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 251
+G RV D+ILRLVP FRT LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYP
Sbjct: 9 HGIRVADEILRLVPDTAAFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYP 68
Query: 252 NAVPS 256
N P+
Sbjct: 69 NTSPA 73
>gi|258563048|ref|XP_002582269.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907776|gb|EEP82177.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1040
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 174/408 (42%), Gaps = 70/408 (17%)
Query: 21 TDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRL-DQIVKIWVKKISRAKGLNDQLL 79
T L LE LR+ + ++ + R+ V+ L D I + + G N +
Sbjct: 605 TPTKLFDRHSLELCLRESMMLPTEADVSKRQSVVDLLRDVITQGPAARAGDGSGNNPE-- 662
Query: 80 QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELH 137
+ GSY LGV P +DID L +GP + FF + L + + + L
Sbjct: 663 PNIAMVLVPVGSYGLGVWSPSSDIDCLVIGP---ISSKTFFAVAEKRLRKATDLGIRILR 719
Query: 138 PVPDAHVPVMKFKFSGVSIDLLYA----------RLSLWVIPEDLDISQDSILQNADEQT 187
V A +++ + G+ DL Y R+SL +P D DS Q
Sbjct: 720 RVKAATGTMLELEVEGIKCDLQYCPASRVVEAWQRISL--LPPD-----DSTFY-LSSQA 771
Query: 188 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
+ L R D I R +P + FR R + WAKRRG+Y G+LGGI+ ++++R+C
Sbjct: 772 LTKLQAFRDVDYIRRSIPDLAAFRAAHRFITLWAKRRGIYLARFGYLGGIHITMMLSRVC 831
Query: 248 QLY--PNAVPSM-LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDKYH 301
+L SM ++ RFF+ YT + W +L DP + P+ + +
Sbjct: 832 KLSCRKGGATSMDMICRFFKYYTNFDWEREILC-------------DPSFFKDAPRYRRY 878
Query: 302 L---MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 358
M I+T P +N + + S ++ R ++ E QR E+ + D+ W L T
Sbjct: 879 ANEPMVILTIHTPLVNIARSASKASTRTIIKELQRMDELI-----STPDMSWSGLVGNIT 933
Query: 359 -------FFEAYKNYLRIDIS------AENADDLRNWKGWVESRLRQL 393
F + Y +Y++I + A+ + L GW+ESR +L
Sbjct: 934 ASDSSQEFLKTYTSYIKIHVQYWGMILAKGSTLL----GWLESRCCRL 977
>gi|367022686|ref|XP_003660628.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
gi|347007895|gb|AEO55383.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
Length = 1260
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 163/394 (41%), Gaps = 49/394 (12%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFG 90
+++ L + + S+ EA R+ L L +V + A G Q + G
Sbjct: 636 VKEALAALQVIPSEGEATKRKRALDLLKSVVLD--TPSADAAGARSQ----PTVVVVPVG 689
Query: 91 SYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP-EVTELHPVPDAHVPVM-K 148
SY LGV +DID LC+GP + FF Q + + + +L AH M +
Sbjct: 690 SYALGVWTSSSDIDVLCIGPFSSN---TFFALASQRVRKAAAQGIKLLRRVRAHTGTMLE 746
Query: 149 FKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 204
+ GV +DL Y + W P+ L I + + QT+ L R D + R V
Sbjct: 747 LEVHGVKVDLQYCPAASVAERW--PDVLRIPSSDPVWSLSAQTLSKLKAIRDADYLRRSV 804
Query: 205 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN-----AVPSMLV 259
P + FR R ++ WAK RG+Y+ GFL GI ++L+AR+ +L P L+
Sbjct: 805 PDLTTFRLAHRFVKTWAKSRGIYAARFGFLSGIQISVLLARVQKLLAREAGAPPTPEALI 864
Query: 260 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP----RRNPKDKYHLMPIITPAY--PCM 313
FF Y + W + +DP RR P + P+ Y P +
Sbjct: 865 VTFFHHYAAFDWSAQL-------------AFDPLFHRRRLPYSRTAREPLAILGYFPPAL 911
Query: 314 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT----FFEAYKNYLRI 369
N++ S + + + EF+R + + A W +L F AYK+Y+++
Sbjct: 912 NTALAASVPSTKTLAAEFRRASDALRSATDPPA--SWSSLLSVSAGRDEFLAAYKSYVKL 969
Query: 370 DISAENADDLR--NWKGWVESRLRQLTLKIERHT 401
D+ R + GW+ESR L + + R
Sbjct: 970 DVQYWGLSLSRGAQFLGWLESRCVMLLVDLHRRA 1003
>gi|294867702|ref|XP_002765194.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
gi|239865189|gb|EEQ97911.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
Length = 602
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 167/412 (40%), Gaps = 89/412 (21%)
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE----VTELHPVPD 141
+ FGS + + P +DIDT+ + + + + ++LTEM + + D
Sbjct: 98 LLVFGSTLMEITTPTSDIDTVVL--VSDVKRSAYMKRVQKVLTEMEPFRSYCDDFSLLAD 155
Query: 142 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA------------------ 183
+ VP +K + G +D+ +A L V+ E D Q + +
Sbjct: 156 SLVPYIKCSYRGYPVDVQFAVLPSTVLKECHDAIQAEVHRVCTAGLLEPEGSAAADWSNS 215
Query: 184 --DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 241
D+ T+RSLNG RV +L+ P + +R LR ++ WAK RG+YSNV G+ GG+ WA+
Sbjct: 216 LVDDATIRSLNGVRVGRYLLKRTPVLAVYRVVLRFVKMWAKARGIYSNVMGYFGGVTWAI 275
Query: 242 LVARICQ---------LYPNAVPSMLVSRF-FRVYTQWRWPNPV------LLCAIEEGSL 285
LV+++ Q +AV +L+ F F W NPV L + GS+
Sbjct: 276 LVSKVMQDNAELAMRETEEDAVREILLKFFDFCSTHPWGSENPVTANDEILNGFVSAGSV 335
Query: 286 GLQVWDPR-------------------RNPKD----------KYHLMPIITPAYPCMNSS 316
+ R R+P + + M ++TP P NSS
Sbjct: 336 EMYTPPARDIFGDDDVVDKQLAPQHVLRDPAECPYAADGVGIEGQCMVVLTPVLPTQNSS 395
Query: 317 YNVSTSTLRIMMDEFQRGHEICE--AMEKNEADVDWDTLFEPFTFFEAYKN--YLRIDIS 372
+N +M+ EF+R + A+ + F YK ++ ++I
Sbjct: 396 FNALDFNRYVMVQEFKRAAHMLSLFALSPQSCPFRLGAVCARVHPFRLYKRLLFVEVEIR 455
Query: 373 AENADDLRN---------WKGWVESRLRQLTLKIERHTYN----MLQCHPHP 411
EN L N VES++R T K+ ++ L+ +PHP
Sbjct: 456 PENQRTLSNDDVHLLQKRIAAMVESKVRIFT-KLSAAAFHEEGTYLRLYPHP 506
>gi|326471780|gb|EGD95789.1| hypothetical protein TESG_03255 [Trichophyton tonsurans CBS 112818]
Length = 1212
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 192/454 (42%), Gaps = 69/454 (15%)
Query: 14 PISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKG 73
P+ LA D L K+ L D ++ +E+ V R+ V+ L QI+ + S K
Sbjct: 582 PLQLAS-LPDTLSSLDKMVSSLEDSSMLPGEEDIVIRKTVVATLAQILTEPIHDAS-GKD 639
Query: 74 LNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE- 132
+ L+ + GSY LG GP +D+D LC+G A FF Q L +
Sbjct: 640 IKTPLV------LIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASAL 690
Query: 133 -VTELHPVPDAHVPVMKFKFSGVSIDLLY---ARLS-LWV----IPEDLDISQDSILQNA 183
+ + V A +++ + + +DL Y A+++ W IP S D I +
Sbjct: 691 GIRIVRKVKAATGVMLELQSGHIKLDLQYCPAAKIAERWQEVSRIP-----SHDPIF-DL 744
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
++ L R + + R+VP + FR RC+ WAK GVYS+ G LGGI+ +++
Sbjct: 745 SLHSLSKLQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMML 804
Query: 244 ARICQL----YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
+R+ QL + LV+ FF Y + W N +++ S G+ RR+ ++
Sbjct: 805 SRLHQLIHERFGRVTVPELVAMFFHHYAHFDWKNNMVV------SPGVHT-RYRRSLREP 857
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT- 358
M I+T P +N + V+ +LR ++ F+R E+ E W + +
Sbjct: 858 ---MVILTAHVPTVNVARAVTAPSLRTIVSAFKRAEELI-----GEDGAKWSNILNDISI 909
Query: 359 ----------FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 406
F AY +Y+++++ + + GW+ESR +L + R +
Sbjct: 910 SQNNQTGAEKFLAAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQG-IH 968
Query: 407 CHPHPGDFSDKSKP---------LYCSYFMGLQR 431
P F+ P Y +GL+R
Sbjct: 969 GRIWPARFTSIDAPDSENDGETEYQGCYLVGLER 1002
>gi|326484937|gb|EGE08947.1| DUF455 domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 1212
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 192/454 (42%), Gaps = 69/454 (15%)
Query: 14 PISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKG 73
P+ LA D L K+ L D ++ +E+ V R+ V+ L QI+ + S K
Sbjct: 582 PLQLAS-LPDTLSSLDKIVSSLEDSSMLPGEEDIVIRKTVVATLAQILTEPIHDAS-GKD 639
Query: 74 LNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE- 132
+ L+ + GSY LG GP +D+D LC+G A FF Q L +
Sbjct: 640 IKTPLV------LIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASAL 690
Query: 133 -VTELHPVPDAHVPVMKFKFSGVSIDLLY---ARLS-LWV----IPEDLDISQDSILQNA 183
+ + V A +++ + + +DL Y A+++ W IP S D I +
Sbjct: 691 GIRIVRKVKAATGVMLELQSGHIKLDLQYCPAAKIAERWQEVSRIP-----SHDPIF-DL 744
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
++ L R + + R+VP + FR RC+ WAK GVYS+ G LGGI+ +++
Sbjct: 745 SLHSLSKLQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMML 804
Query: 244 ARICQL----YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 299
+R+ QL + LV+ FF Y + W N +++ S G+ RR+ ++
Sbjct: 805 SRLHQLIHERFGRVTVPELVAMFFHHYAHFDWKNNMVV------SPGVHT-RYRRSLREP 857
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT- 358
M I+T P +N + V+ +LR ++ F+R E+ E W + +
Sbjct: 858 ---MVILTAHVPTVNVARAVTAPSLRTIVSAFKRAEELI-----GEDGAKWSNILNDISI 909
Query: 359 ----------FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 406
F AY +Y+++++ + + GW+ESR +L + R +
Sbjct: 910 SQNNQTGAEKFLAAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQG-IH 968
Query: 407 CHPHPGDFSDKSKP---------LYCSYFMGLQR 431
P F+ P Y +GL+R
Sbjct: 969 GRIWPARFTSIDAPDSENDGETEYQGCYLVGLER 1002
>gi|414888166|tpg|DAA64180.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888167|tpg|DAA64181.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 265
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 28/193 (14%)
Query: 232 GFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL------CAIEEGSL 285
GF GI+ A+L A +C+ +P+A S L + FF+ + W W PV L C EG
Sbjct: 12 GFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEG-- 69
Query: 286 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 345
LMPI+ P P + V+ +L+ + +E RG+ + +
Sbjct: 70 ---------------RLMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVL--TRDPLR 112
Query: 346 ADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 405
D W LFEPF + + Y+ +LRI + A +L +W GWV+SR R L LK+ER +
Sbjct: 113 HDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER---AGI 169
Query: 406 QCHPHPGDFSDKS 418
+C P P + D +
Sbjct: 170 ECDPCPSEEVDHT 182
>gi|119620436|gb|EAX00031.1| poly(A) polymerase gamma, isoform CRA_c [Homo sapiens]
Length = 425
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 108/189 (57%), Gaps = 13/189 (6%)
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+
Sbjct: 1 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQK 58
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSK 419
Y++Y+ + SA ++ W G VES++R L +ER+ + + +P PG+
Sbjct: 59 YRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKD 118
Query: 420 PLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHV 473
Y S +F+G+ ++ V E D+ ++ F +QA ++ L++ GM+I HV
Sbjct: 119 NNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKE-GMKIEATHV 176
Query: 474 TRRNLPNFV 482
++ L +++
Sbjct: 177 KKKQLHHYL 185
>gi|402581474|gb|EJW75422.1| hypothetical protein WUBG_13666 [Wuchereria bancrofti]
Length = 351
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 31/205 (15%)
Query: 271 WPNPVLLCAIEEG------SLGLQVWDPR------RNPKDKYHLMPIITPAYPCMNSSYN 318
WP+PV+L E SL VWDPR +P ++HLMPI+TPA+P NS++N
Sbjct: 37 WPHPVVLKETEVSHARDMPSLQELVWDPRSRSGDRESPSRRFHLMPIVTPAFPQQNSTFN 96
Query: 319 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR-IDISAENAD 377
V+ S+L+I+M+E + G + K +A W LFE FF YK++L + +SA D
Sbjct: 97 VTKSSLKIIMNEIEEGLVTINDIMKGKA--GWSALFEEVNFFSRYKHFLALLCLSATEQD 154
Query: 378 DLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS----------YFM 427
+L W G VES++R L +ER ++ CH H + ++ P +F+
Sbjct: 155 ELV-WCGLVESKIRFLIASLERRE-SIRVCHVHTKYYQPRNDPFPVQVSLQNPRCRLWFI 212
Query: 428 GLQRKQGVPVGEGEQFDIRLTVKEF 452
GL + V + DI+ V+ F
Sbjct: 213 GLDLNKTV----SRKIDIQHEVQSF 233
>gi|296421816|ref|XP_002840460.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636676|emb|CAZ84651.1| unnamed protein product [Tuber melanosporum]
Length = 1241
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 185/419 (44%), Gaps = 66/419 (15%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVS--REEVLGRLDQ 59
G NG RL ++E DD L++ ++ Y+ +++E A++ RE +L +
Sbjct: 614 GQRNGARLQLSEIY-----IDDKLLKAL-VDPYMPCKTDRDAREAAITSLREILLQEQES 667
Query: 60 IVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHAT----- 114
++ + K ++G +L GSY LGVHG +DID LCV A
Sbjct: 668 VLGVGFKP---SRGAIPIILAPV-------GSYALGVHGRDSDIDCLCVSTISAKTFFEV 717
Query: 115 ---REEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE- 170
R F GE LT D+ VPV++ K + DL Y + SL +I
Sbjct: 718 ARKRIRRFGGERGIRLTRFV---------DSKVPVLEVKVGNIKFDLQYCQ-SLAIIEHW 767
Query: 171 ---DLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVY 227
L DS+ + ++SLN R T+ +LR +P I FR R ++ WA GV+
Sbjct: 768 SAIPLLPPNDSVF-SLPASGLKSLNSYRDTEFLLRTIPNINVFRLAHRFIKIWALASGVF 826
Query: 228 SNVAGFLGGINWALLVARICQLY---PNAVPSMLVSR-FFRVYTQWRWPNPVLLCAIEEG 283
S+ G+LGG + LL+ARIC+L P V + + R FF Y++ W + +C E
Sbjct: 827 SSRFGYLGGFHITLLLARICKLADGDPKDVTAAKIVRLFFAYYSKTEWLTEI-ICD-PEF 884
Query: 284 SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEK 343
S G R P M + + P +N + N + ++ + EF E EK
Sbjct: 885 SAGASYQRFSREP------MAVTSIYAPVVNVARNATRHSVSALTREF-------ELAEK 931
Query: 344 NEADVDWD--TLFEPFTFFEAYKNYLRIDISAENADDLRNWKG---WVESRLRQLTLKI 397
WD ++ F Y++Y++ID+ + LR K WVES + L + +
Sbjct: 932 ALDSGRWDLRSMGRENEFLAEYESYVKIDVQYW-GNTLRRGKALTLWVESTIPLLLVGL 989
>gi|340501019|gb|EGR27841.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 306
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 133/271 (49%), Gaps = 28/271 (10%)
Query: 184 DEQTVRSLNGCRVTDQILRLV------PKIQN--FRTTLRCMRFWAKRRGVYSNVAGFLG 235
D++ ++S+NG R IL V P+I F+ L+ ++ WA+ G+Y N GFL
Sbjct: 2 DQKDIKSINGFRSNQAILEYVSEKNPNPEIAKSRFKDALKVIKIWARHNGIYDNRLGFLS 61
Query: 236 GINWALLVARICQLYPNAVPSMLVSRFFRVY-TQWRWPNPVLLCAIEEGSLGLQVWDPRR 294
GI+ A+++A+I QL+PN + ++ +FF+ + ++W W + + +Q+ +R
Sbjct: 62 GISLAIMLAKILQLFPNLEVNGIIKQFFQTFASRWDWKKMDVQLGSRSEEMKVQMQSQQR 121
Query: 295 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 354
M IITPAYP N++ V I++ + ++ + N+ ++ W+ +
Sbjct: 122 ------KCMHIITPAYPEYNTTDRVKMINFNIIVAKLIASNDYIQ----NQKNIVWEKIV 171
Query: 355 EPFTFFEAYKNYLRIDISAENADDLRNW---KGWVESRLRQLTLKIERHTYN--MLQCHP 409
E F YK ++ ID+ ++ + K + RL L +++ Y+ ++ P
Sbjct: 172 EKENFINHYKLFIEIDLIQNKKGEIGQFIAQKKYFALRLLNLFDQLKGIEYDPEKIEVRP 231
Query: 410 HPGDFSDKSKP--LYCSYFM-GLQRKQGVPV 437
P F DK P YC+ F+ GL+ K PV
Sbjct: 232 WPI-FFDKKDPDYPYCAAFLIGLKNKMHQPV 261
>gi|392870452|gb|EAS32255.2| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1241
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 216/491 (43%), Gaps = 69/491 (14%)
Query: 11 ITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRL-DQIVKIWVKKIS 69
I+ P SLA P + L L+ LR+ ++ ++E+ R VL L + I+ ++
Sbjct: 606 ISIPSSLATPAN--LSDKHDLDLCLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVD 663
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
N++ + + GSY LGV P +D+D L +GP + FF Q L
Sbjct: 664 ENGHSNNE--PDIAMVLVPVGSYGLGVWSPSSDVDCLSIGP---ISSKIFFAIAEQRLRR 718
Query: 130 MPE--VTELHPVPDAHVPVMKFKFSGVSIDLLY---ARLSLWVIPEDLDISQDSILQNAD 184
+ + L V A +++ + +G+ DL Y AR+ L D I +
Sbjct: 719 AADSGIRILRKVKAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF-DLS 777
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
Q + L R D I R +P + FRT R + WAK RGVY + G+LGGI+ ++++
Sbjct: 778 YQALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLS 837
Query: 245 RICQLYPNAV---PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKD 298
R+ +L+ V + ++ RFF+ Y + W + V+DP P+
Sbjct: 838 RVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHKT-------------VFDPFFFESTPRY 884
Query: 299 KYHL---MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL-- 353
+ + M I+T P +N + + + R +++E +R ++ ++ D+ W L
Sbjct: 885 RRYANEPMVILTINVPLINVA-RATAGSARTIVEELRRMAQLM-----SDPDMTWSKLLN 938
Query: 354 -----FEPF-TFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNML 405
EP F AY +Y++I + + + GW+ESR +L I+R + +
Sbjct: 939 STVSTLEPSEEFLTAYSSYIKIHVQYWGISLAKGKTLLGWLESRCVRLLNDIDRKLPS-I 997
Query: 406 QCHPHPGDF------SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS-- 457
P F SD S+ C Y +GL +++ EG + +T +E KQ++
Sbjct: 998 YARMWPARFSSKDAMSDDSEYQGC-YLIGLTKRE----TEGTE---AMTKEERKQSLDLM 1049
Query: 458 MYTLRKPGMQI 468
M L K QI
Sbjct: 1050 MRVLEKFKTQI 1060
>gi|189194681|ref|XP_001933679.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979243|gb|EDU45869.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1151
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 162/374 (43%), Gaps = 49/374 (13%)
Query: 90 GSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVM 147
GSY LGV +DID LC+G + FF Q + + V L V + ++
Sbjct: 588 GSYALGVWTSDSDIDCLCIG---TISSKTFFKLARQRIIKSDNRGVRILRKVEASTGTML 644
Query: 148 KFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 205
+ +GV +DL Y + V E +I + N ++R L R I R +P
Sbjct: 645 ELSVNGVLMDLQYCPATQVVERWSEFRNIPASDPIFNLSLLSLRKLKPYRDLLYIQRTLP 704
Query: 206 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP----NAVPSMLVSR 261
+ +FR RC++ WA +RG+YS GFLGG++ L+++ IC+ +A + LV+
Sbjct: 705 SLSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWICKRLAYDSGSASAADLVTS 764
Query: 262 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 321
FF Y Q+ W N ++ + PR N + M ++ P N ++ +
Sbjct: 765 FFHHYGQFDWTNEMVY------DVFFHKKRPRYN-RSAREPMVVLGFHAPNSNIAHTSTV 817
Query: 322 STLRIMMDEFQ-RGHEICEAMEKNEADVDWDTLF--------------EPFTFFEAYKNY 366
L+ ++ EF+ G +C E + WD F F E Y N+
Sbjct: 818 PGLQTLVKEFKAAGERLC------EQGMTWDAFFGLGPTLSSVSSPSLGAAGFLETYHNF 871
Query: 367 LRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-------DK 417
+++DI ++ GWVESR L ++I + N + PG F+ D+
Sbjct: 872 VKVDIQFWGRTLTKGKSLVGWVESRCISLIVEIHKTLPNS-EVRIWPGRFTNNETSAADE 930
Query: 418 SKPLYCSYFMGLQR 431
S+ + Y +GL +
Sbjct: 931 SRDYHGCYLIGLSK 944
>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
Length = 771
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 150/339 (44%), Gaps = 63/339 (18%)
Query: 77 QLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRH----------ATREEDFFGELHQM 126
Q+L E + I +GS L +D D + V + R++ F +L +
Sbjct: 343 QILNECDYLILQYGSSFLMAETQESDYDLILVNKLNDLQQTCENSDLIRQQFLFEKLAEQ 402
Query: 127 LTEMPEVT--ELHPVPDAHVPVMKFKF-SGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
L + E+ + A VP++K K+ ++IDL A V + +SQ SI QN
Sbjct: 403 LNMNFTIKNLEIFKIKHAKVPILKMKYKQQINIDLSLAI----VCNTEEKLSQISI-QNY 457
Query: 184 ---DEQTVRSLNGCRVTDQILRLVP----KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
D Q+ S+N + +I LV + F L+ ++ WA+RR VY G+LGG
Sbjct: 458 LLFDNQSEVSINAVIQSQEIKNLVAGCNVNFELFGLCLQHVKTWAQRRKVYGQQYGYLGG 517
Query: 237 INWALLVARICQLYPNAVPSM----------------LVSRFFRVYTQWRWPNPVLL--- 277
I +A+L A I Q Y N M + +FF+ Y+ W WPNP++L
Sbjct: 518 IAFAILCANIVQAYQNDDKFMCYLNDPNIKHKQKLKYFLLKFFKFYSSWEWPNPIILDQG 577
Query: 278 CAIEEGSL---GLQV-------WDPRRNPKDKYHLMPIITP--------AYPCMNSSYNV 319
+E L G QV W+P D HLMPII+P N++ V
Sbjct: 578 FYDQENLLNPNGQQVKMNVKKIWNPISCIGDSQHLMPIISPQIKINTQKTITSTNTADQV 637
Query: 320 STSTLRIMMDEFQRGHEICEAMEKNEADV-DWDTLFEPF 357
S L+I + EF+R ++I + + K + + + + FE F
Sbjct: 638 LNSNLQIYLYEFKRAYKIMKKIYKGKIKLKELGSAFESF 676
>gi|315043460|ref|XP_003171106.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311344895|gb|EFR04098.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1217
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 184/436 (42%), Gaps = 50/436 (11%)
Query: 23 DDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEA 82
D L ++ L + +L S E+ SR+ V L QI+ ++ S + + L+
Sbjct: 594 DALSSLDEIVACLENSSLLPSSEDLKSRKAVAATLAQILTEPIRD-SSGRDIKTPLV--- 649
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVP 140
+ GSY LG P +D+D LC+G A FF Q L + + + V
Sbjct: 650 ---LIPVGSYGLGTWSPDSDVDCLCIG---AISSTTFFSLAIQRLRKASALGIRIMRKVK 703
Query: 141 DAHVPVMKFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRV 196
A +++ + + +DL Y + W E I + + + ++ L R
Sbjct: 704 AATGMMLELQSGNIKLDLQYCPAANIAERW--QEVSRIPSNDPIFDLSLHSLSKLQPYRD 761
Query: 197 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 256
+ I R+VP + FR RC+ WAK GVY++ G LGGI+ ++++R+ QL V
Sbjct: 762 QEYIKRMVPDMNVFRLAHRCITQWAKSSGVYTSKFGLLGGIHITMMLSRLHQLLHGKVGR 821
Query: 257 M----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 312
+ LV+ FF Y + W N +++ S G+Q R + M I+T P
Sbjct: 822 VTIPELVAMFFHHYAHFDWKNSMVV------SPGVQ----SRYRRSMREPMVILTVHVPT 871
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE------PFTFFEAYKNY 366
+N + V+ +LR + F+R E+ +++ DT F A+ +Y
Sbjct: 872 VNVARAVTAHSLRTIASAFKRAEELLAENGARWSNILRDTSISHNKETGAEKFLGAHNSY 931
Query: 367 LRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP---- 420
+++++ + + GW+ESR +L ++R + P F+ K P
Sbjct: 932 IKVNVQYWGPSPTQASSLVGWIESRFFRLLNDLDRQVPGVYG-RIWPARFTSKDSPDSPD 990
Query: 421 -----LYCSYFMGLQR 431
Y +GL+R
Sbjct: 991 DGETEYQGCYLVGLER 1006
>gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
Length = 1230
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 167/379 (44%), Gaps = 51/379 (13%)
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQML--TEMPEVTELHPVPDAH 143
I GSY LGV +DID LC+G + FF Q + ++ V L V +
Sbjct: 663 IVPVGSYALGVWTSDSDIDCLCIG---TISSKTFFKLARQRIIRSDNRGVRVLRKVEAST 719
Query: 144 VPVMKFKFSGVSIDLLYARLSLWVI---PEDLDISQDSILQNADEQTVRSLNGCRVTDQI 200
+++ +GV +DL Y ++ V+ E +I + N ++R L R I
Sbjct: 720 GTMLELSVNGVLMDLQYCP-AIQVVERWSEFRNIPASDPMFNLSLLSLRKLKPYRDLLYI 778
Query: 201 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP----NAVPS 256
R +P +FR RC++ WA +RG+YS GFLGG++ L+++ +C+ +A +
Sbjct: 779 QRTLPSPSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWVCKRLAYDSGSASAA 838
Query: 257 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 316
LV+ FF Y Q+ W N ++ + PR N + M ++ P N +
Sbjct: 839 DLVASFFHHYGQFDWTNDMVY------DVFFHKKRPRYN-RSTREPMVVLGFHTPNSNIA 891
Query: 317 YNVSTSTLRIMMDEFQRGHE-ICEAMEKNEADVDWDTLFEPFT--------------FFE 361
+ + L+I++ EF+ + +C E + WD F P + F E
Sbjct: 892 HTSTMPGLQILVKEFKAADKRLC------EPGMTWDAFFGPGSTLSPVSSPSLGAAGFLE 945
Query: 362 AYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS---- 415
Y+N++++DI ++ GWVESR L ++I + + PG F+
Sbjct: 946 TYQNFVKVDIQFWGRTLTKGKSLVGWVESRCISLIVEIHK-ALPKSEVRIWPGRFTDNET 1004
Query: 416 ---DKSKPLYCSYFMGLQR 431
D+SK + Y + L +
Sbjct: 1005 NVADQSKDYHGCYLISLSK 1023
>gi|71657771|ref|XP_817395.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70882585|gb|EAN95544.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 406
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 119/302 (39%), Gaps = 74/302 (24%)
Query: 250 YPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDK 299
+PN + +V RFFR+Y W PNP + L L + WDPR + D
Sbjct: 5 HPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDA 64
Query: 300 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC---------EAMEKNEADVDW 350
L P++TPA P N+ +NV+ + LR + EF RGHEIC EA + W
Sbjct: 65 MALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIW 124
Query: 351 DTLFEPFTFFEAYKNYLRIDISAENADDLRN------------WKGWVESR------LRQ 392
L EP FF +K YL + +S +A+ + W G ESR +R
Sbjct: 125 SRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAESRGYALENVRH 184
Query: 393 LTLKIERHTYNM--------------------------LQCHPHPGDFSDKSKP--LYCS 424
+ +++ Y + H G D S P C
Sbjct: 185 VRIRLNPRRYEAPEEVETRARLLKKTSRSSGGGNGSMEVSSHQTSGAVDDSSAPKIFSCH 244
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRNLPN 480
YF+G+ P G + D+ +++ F V K G+ I+V +++ +P
Sbjct: 245 YFIGMSVDPKAPSG---KIDLAPSIRAFHGIVRQLRQYKEGITRLPVITVEDISK--IPA 299
Query: 481 FV 482
FV
Sbjct: 300 FV 301
>gi|443916802|gb|ELU37750.1| polymerase [Rhizoctonia solani AG-1 IA]
Length = 508
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 91/196 (46%), Gaps = 50/196 (25%)
Query: 270 RWPNPVLLCAIEE--------GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 321
+WP P+LL IEE + +VW+PR D+ HLMPIITP+YP M S++NV+
Sbjct: 77 KWPQPILLQQIEEEVKELDFSKRMNFRVWNPRVC--DRNHLMPIITPSYPSMCSTHNVTR 134
Query: 322 STLRIMMDEFQRGH------------------EICEAMEKNEADVDWDTLFEPFTFFEAY 363
ST+ +M DEF RG +I E + A +W LF FF+ Y
Sbjct: 135 STMSVMKDEFMRGKFSYLLLCTDDTNNKRPGSQIVEQIMFRRA--EWSELFAKHDFFQKY 192
Query: 364 KNYLRIDISAENADDLRNW----------------KGWVESRLRQLTLKIERHTYNMLQC 407
+ YL+I S+ A+D W G VESRLRQL +K+E +
Sbjct: 193 RYYLQIIASSGKAEDQLKWYVSPFRAWVVSEAASRSGTVESRLRQLVMKLE-FVDQLEVA 251
Query: 408 HPHPGDFSDKSKPLYC 423
HP F K YC
Sbjct: 252 HPFIKGFEQKH---YC 264
>gi|327357117|gb|EGE85974.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 1251
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 207/502 (41%), Gaps = 81/502 (16%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW-VKKISRAKGLNDQLLQEANAKIFTF 89
L+ L D ++ S E+A R+ L +++ + + + K ++ L + + T
Sbjct: 628 LKVCLADKSIVPSSEDAEKRKAAFSLLKNLIQHGSLPESGKGKEIDQPRL---SIVVTTV 684
Query: 90 GSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVM 147
GSY LGV +D+D LCVG + + FF Q L + E V L V A ++
Sbjct: 685 GSYGLGVWTDSSDVDCLCVG---SISSKVFFELTLQRLKKGAEWDVKILRKVKAATGTML 741
Query: 148 KFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
+ + + V DL Y A W+ E + + S L + + L R + R
Sbjct: 742 ELEINSVKFDLQYCPAAAVAERWL--EVPHLPRSSPLFDLALLPLMKLQPYRDQAYLQRT 799
Query: 204 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LV 259
VP FR R ++ WAK RG+YS+ G+LGGI+ ++++++ +L P+ P+ ++
Sbjct: 800 VPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPATSAADIL 859
Query: 260 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK-DKYHLMP-----IITPAYPCM 313
FF Y + W V+ +DP + K +YH P I+T P M
Sbjct: 860 CTFFNYYGNFNWKEDVM-------------YDPSFHKKPPRYHRTPQEGMVILTLHAPVM 906
Query: 314 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-------------FF 360
N + + S + R ++DE +R + +E + +W L F
Sbjct: 907 NVARSASIPSTRTIVDEMKRADNLI-----SEGNTNWAELVGIVANTGKSSLSVSGDEFL 961
Query: 361 EAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--- 415
+Y +Y++I++ + + GW+ESR L + R + +Q P F+
Sbjct: 962 RSYNSYIKINVQYWGLSLAKGSSLVGWLESRCLVLLADLHRK-FPDIQTRIWPARFTQIE 1020
Query: 416 --DKSKP------LYCSYFMGLQRKQGV--PVGEGEQFDIRL-------TVKEFKQAVSM 458
D S P Y +GL + + P + D +L ++ +F +
Sbjct: 1021 DHDDSTPAQEEREYQGCYLIGLTKAEHATDPTRTLSKSDRKLAHDTLQASIDQFASNIHN 1080
Query: 459 YT--LRKPGMQISVAHVTRRNL 478
Y + V+HV + NL
Sbjct: 1081 YKKYFDSASAWVDVSHVKQGNL 1102
>gi|310792019|gb|EFQ27546.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
M1.001]
Length = 1198
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 184/447 (41%), Gaps = 76/447 (17%)
Query: 25 LMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANA 84
L T L + + ++ ++ ++++ +R+E L L QI+ + + DQ
Sbjct: 581 LSDTAALRQCMENLEVFPTEQDETTRKEALQLLRQIL------LDSDQANADQTRGRPTV 634
Query: 85 KIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDA 142
+ GSY LG +DID LC+G + FF Q L + E V L V
Sbjct: 635 MLVPVGSYGLGTWSRTSDIDCLCIG---SISPRIFFTLARQRLRKSGESGVRLLRKVKAK 691
Query: 143 HVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE-------QTVRSLNGCR 195
+++ + G+ DL Y + P +D D + + + QT+ L R
Sbjct: 692 TGTMLEVEVMGIKCDLQYCQ-----APSVVDQWPDMLKRPPSDPAFSLPMQTLLKLKPAR 746
Query: 196 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ--LYPNA 253
+ R +P + FR + + ++ WAK RG+Y+ G+LGGI+ ++++ ++C+ L
Sbjct: 747 DLFYLQRSIPDLAQFRVSFQAIKTWAKSRGIYAAKFGYLGGIHLSVMLVKVCKMLLRVGG 806
Query: 254 VPSM--LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP-----II 306
V S +++ FF Y+++ W N V V+DP + +YH P ++
Sbjct: 807 VVSAVDIITTFFDHYSRFDWQNDV-------------VFDPFFHKNLRYHRTPREAMCLL 853
Query: 307 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD-VDWDTLF----------- 354
P +N++ S T++I+ E+C A + D W +L
Sbjct: 854 GWHSPTLNTALIASVPTVKII------SAELCHAATQLSGDGASWQSLLSIPDSSQDRNM 907
Query: 355 --EPFTFFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPH 410
F +Y++++ + I A R + GW+ESR L + I R L
Sbjct: 908 TPSASKFLGSYRSFVNLRIHYWGASLERGSRLVGWLESRCASLLVDINRRVPE-LSARIW 966
Query: 411 PGDFSDKSKP--------LYCSYFMGL 429
P F D P SY +GL
Sbjct: 967 PARFVDSLTPEADETRGDYQGSYLIGL 993
>gi|320039014|gb|EFW20949.1| hypothetical protein CPSG_02791 [Coccidioides posadasii str.
Silveira]
Length = 1241
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 211/490 (43%), Gaps = 67/490 (13%)
Query: 11 ITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISR 70
I P SLA P + L L+ LR+ ++ ++E+ R VL L ++
Sbjct: 606 ILIPSSLATPAN--LSDKHDLDLCLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVE 663
Query: 71 AKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 130
G +D A + GSY LGV P +D+D L +GP + FF Q L
Sbjct: 664 ENGHSDNEPDIAMV-LVPVGSYGLGVWSPSSDVDCLSIGP---ISSKIFFAIAEQRLRRA 719
Query: 131 PE--VTELHPVPDAHVPVMKFKFSGVSIDLLY---ARLSLWVIPEDLDISQDSILQNADE 185
+ + L V A +++ + +G+ DL Y AR+ L D I +
Sbjct: 720 ADSGIRILRKVKAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF-DLSY 778
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
Q + L R D I R +P + FR R + WAK RGVY + G+LGGI+ ++++R
Sbjct: 779 QALTKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSR 838
Query: 246 ICQLYPNAV---PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDK 299
+ +L+ V + ++ RFF+ Y + W + V+DP P+ +
Sbjct: 839 VFKLFCGEVRVTSTDMIYRFFQYYADFDWEHET-------------VFDPFFFESTPRYR 885
Query: 300 YHL---MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL--- 353
+ M I+T P +N + + + R +++E +R ++ ++ D+ W L
Sbjct: 886 RYANEPMVILTINVPLINVA-RATAGSARTIVEELRRMAQLM-----SDPDMTWSKLLNS 939
Query: 354 ----FEPF-TFFEAYKNYLRIDISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQ 406
EP F AY +Y++I + + GW+ESR +L I+R + +
Sbjct: 940 TVSTLEPSEEFLTAYSSYIKIHVQYWGISLAKGKMLLGWLESRCVRLLNDIDRKLPS-IY 998
Query: 407 CHPHPGDF------SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 460
P F SD S+ C Y +GL ++ E E+ + +T +E KQ++ + T
Sbjct: 999 ARIWPARFSSKDAMSDDSEYQGC-YLIGLTKR------ETERTEA-MTKEERKQSLDLMT 1050
Query: 461 --LRKPGMQI 468
L K QI
Sbjct: 1051 RVLEKFKTQI 1060
>gi|389628670|ref|XP_003711988.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|351644320|gb|EHA52181.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|440474755|gb|ELQ43479.1| DUF455 domain-containing protein [Magnaporthe oryzae Y34]
gi|440487378|gb|ELQ67170.1| DUF455 domain-containing protein [Magnaporthe oryzae P131]
Length = 1238
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 148/342 (43%), Gaps = 51/342 (14%)
Query: 90 GSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP-----EVTELHPVPDAHV 144
GS+ LGV +DID LC+GP ++ FF Q + + E+ L V
Sbjct: 668 GSWGLGVSTLSSDIDCLCIGPLSSST---FFALTTQRIKKASVESGLEIKLLRRVRANSG 724
Query: 145 PVMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 200
+++ + V +DL Y A W P L + + + QT+ L R D +
Sbjct: 725 VMLELEVMSVRVDLQYCAATAVAEQW--PAVLKLPPNDPIFALPAQTLGKLKALRDLDYL 782
Query: 201 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN------AV 254
+P + FR R ++ WA+ RG+YS G+LGGI ++L+AR+C+L +V
Sbjct: 783 RETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLARVCKLLARDYGQEVSV 842
Query: 255 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMN 314
P +L S FF Y + W N + L R+ ++ ++ PA +N
Sbjct: 843 PDIL-SSFFSHYASFDWRNKIAFDPFFHKKLNY-----LRSAREPLAILGFFPPA---LN 893
Query: 315 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT---------------F 359
++ + +++ + E + +E+ NE + WDT F + F
Sbjct: 894 TTLAATVPSMKAIARELSQANELL-----NEDGMTWDTFFGASSAGGDKTHSLARGAADF 948
Query: 360 FEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIER 399
+YK++++I++ + + GW+ESR L + + R
Sbjct: 949 LSSYKSFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSR 990
>gi|303317898|ref|XP_003068951.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108632|gb|EER26806.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1241
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 211/490 (43%), Gaps = 67/490 (13%)
Query: 11 ITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISR 70
I P SLA P + L L+ LR+ ++ ++E+ R VL L ++
Sbjct: 606 ILIPSSLATPAN--LSDKHDLDLCLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVE 663
Query: 71 AKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 130
G +D A + GSY LGV P +D+D L +GP + FF Q L
Sbjct: 664 ENGHSDNEPDIAMV-LVPVGSYGLGVWSPSSDVDCLSIGP---ISSKIFFAIAEQRLRRA 719
Query: 131 PE--VTELHPVPDAHVPVMKFKFSGVSIDLLY---ARLSLWVIPEDLDISQDSILQNADE 185
+ + L V A +++ + +G+ DL Y AR+ L D I +
Sbjct: 720 ADSGIRILRKVKAATGTMIELEVNGIKCDLHYCPAARVVEGWQRISLSPPDDPIF-DLSY 778
Query: 186 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 245
Q + L R D I R +P + FR R + WAK RGVY + G+LGGI+ ++++R
Sbjct: 779 QALTKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSR 838
Query: 246 ICQLYPNAV---PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDK 299
+ +L+ V + ++ RFF+ Y + W + V+DP P+ +
Sbjct: 839 VFKLFCGEVRVTSTDMIYRFFQYYADFDWEHET-------------VFDPFFFESTPRYR 885
Query: 300 YHL---MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL--- 353
+ M I+T P +N + + + R +++E +R ++ ++ D+ W L
Sbjct: 886 RYANEPMVILTINVPLINVA-RATAGSARTIVEELRRMAQLM-----SDPDMTWSKLLNS 939
Query: 354 ----FEPF-TFFEAYKNYLRIDISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQ 406
EP F AY +Y++I + + GW+ESR +L I+R + +
Sbjct: 940 TVSTLEPSEEFLTAYSSYIKIHVQYWGISLAKGKMLLGWLESRCVRLLNDIDRKLPS-IY 998
Query: 407 CHPHPGDF------SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 460
P F SD S+ C Y +GL ++ E E+ + +T +E KQ++ + T
Sbjct: 999 ARIWPARFSSKDAMSDDSEYQGC-YLIGLTKR------ETERTEA-MTKEERKQSLDLMT 1050
Query: 461 --LRKPGMQI 468
L K QI
Sbjct: 1051 RVLEKFKTQI 1060
>gi|302665431|ref|XP_003024326.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
gi|291188376|gb|EFE43715.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
Length = 1216
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 176/408 (43%), Gaps = 56/408 (13%)
Query: 23 DDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEA 82
D L ++ L D ++ +E+ +R+ + L QI+ + S + + L+
Sbjct: 593 DTLSSLDEIVSSLEDSSMLPGEEDFKTRKTAVDTLSQILTEPIHD-SSGRDIKTPLV--- 648
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVP 140
+ GSY LG GP +D+D LC+G A FF Q L + + + V
Sbjct: 649 ---LIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIRIVRKVK 702
Query: 141 DAHVPVMKFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRV 196
A +++ + + +DL Y + W E I + + + ++ L R
Sbjct: 703 AATGIMLELQSGHIKLDLQYCPAANVAERW--QEISRIPFNDPIFDLPPHSLSELQPYRD 760
Query: 197 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 256
+ I R+VP + FR RC+ WAK GVYS+ G LGGI+ ++++R+ QL
Sbjct: 761 QEYIKRMVPDMYVFRLAHRCISQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLIHEKCGR 820
Query: 257 M----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 312
+ LV+ FF Y + W N +++ S G+Q RR+ ++ M I+T P
Sbjct: 821 VTAPELVAMFFHHYAHFDWKNNMVV------SPGVQT-RYRRSLREP---MVILTVHVPT 870
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-----------FFE 361
+N + V+ +LR ++ F+R E+ E W + + F
Sbjct: 871 INVARAVTAPSLRTIVSAFKRAEELM-----GEDGARWSNILNDISISHNNQTGAEKFLA 925
Query: 362 AYKNYLRIDI-----SAENADDLRNWKGWVESRLRQLTLKIERHTYNM 404
AY +Y+++++ S A L GW+ESR +L ++R +
Sbjct: 926 AYNSYIKVNVQYWGPSPTQASSL---IGWLESRFFRLLNDLDRQVLGI 970
>gi|261191320|ref|XP_002622068.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239589834|gb|EEQ72477.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
Length = 1266
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 189/447 (42%), Gaps = 72/447 (16%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW-VKKISRAKGLNDQLLQEANAKIFTF 89
L+ L D ++ S E+A R+ L +++ + + + K ++ L + + T
Sbjct: 628 LKVCLADKSIVPSSEDAEKRKAAFSLLKNLIQHGSLPESGKGKEIDQPRL---SIVVTTV 684
Query: 90 GSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVM 147
GSY LGV +D+D LCVG + + FF Q L + E V L V A ++
Sbjct: 685 GSYGLGVWTDSSDVDCLCVG---SISSKVFFELTLQRLKKGAEWDVKILRKVKAATGTML 741
Query: 148 KFKFSGVSIDLLY----ARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 202
+ + + V DL Y A W+ +P + + S L + + L R + R
Sbjct: 742 ELEINSVKFDLQYCPAAAVAERWLEVPH---LPRSSPLFDLALLPLMKLQPYRDQAYLQR 798
Query: 203 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP----SML 258
VP FR R ++ WAK RG+YS+ G+LGGI+ ++++++ +L P+ P + +
Sbjct: 799 TVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPVTSAADI 858
Query: 259 VSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK-DKYHLMP-----IITPAYPC 312
+ FF Y + W V+ +DP + K +YH P I+T P
Sbjct: 859 LCTFFNYYGNFNWKEDVM-------------YDPSFHKKPPRYHRTPQEGMVILTLHAPV 905
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-------------F 359
MN + + S + R ++DE +R + +E + +W L F
Sbjct: 906 MNVARSASIPSTRTIVDEMKRADNLI-----SEGNTNWAELVGIVANTGKSSLSVSGDEF 960
Query: 360 FEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-- 415
+Y +Y++I++ + + GW+ESR L + R + +Q P F+
Sbjct: 961 LRSYNSYIKINVQYWGLSLAKGSSLVGWLESRCLVLLADLHRK-FPDIQTRIWPARFTQI 1019
Query: 416 ---DKSKP------LYCSYFMGLQRKQ 433
D S P Y +GL + +
Sbjct: 1020 EDHDDSTPAQEEREYQGCYLIGLTKAE 1046
>gi|342879986|gb|EGU81216.1| hypothetical protein FOXB_08249 [Fusarium oxysporum Fo5176]
Length = 1207
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 178/422 (42%), Gaps = 60/422 (14%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGL 74
ISL P L + LE +L +++E R E + L+ ++K IS
Sbjct: 583 ISLQQPPPG-LANSESLEDFLEGRGCLPNEQERTDRVEAIKTLEMVLKDATSSISE---- 637
Query: 75 NDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE-- 132
ND A + GSY LGV +DID LC+GP + + FF Q L
Sbjct: 638 NDSRSGPAFI-VVPVGSYGLGVWTSSSDIDCLCIGPFSS---KTFFALAVQRLKRATTLG 693
Query: 133 VTELHPVPDAHVPVMKFKFSGVSIDLLY-ARLSL---WVIPEDLDISQDSILQNADEQTV 188
V L V +++ + +G+ +DL Y A S+ W PE + Q +
Sbjct: 694 VRILRRVKANSGNMLELEVNGIKVDLQYCAAASIAERW--PEVMKRPASDPAFALSFQAL 751
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
L R + R +P + +R ++ WA+ RG+YS GFLGGI+ ++L+ +C+
Sbjct: 752 AKLKPVRDLFYLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPVCK 811
Query: 249 --LYPN--AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-- 302
Y N P+ +V FF Y+++ W N + V+DP + + +Y+
Sbjct: 812 AVAYENETVTPADIVVTFFHYYSEFDWKNSM-------------VFDPFFHKELRYNRTF 858
Query: 303 ---MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF--EPF 357
+ +I P +N++ S T+ + EF R + ++ D W L EP
Sbjct: 859 REPLCLIGWHAPALNTAPIASIPTVATISSEFGRAKRML-----SDDDCIWGKLLGIEPE 913
Query: 358 T------------FFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYN 403
T F A+K Y++ID ++ + GW+ESR L + I R +
Sbjct: 914 TALGSVQAPAATEFLHAFKTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDINRKLKH 973
Query: 404 ML 405
+L
Sbjct: 974 LL 975
>gi|349805727|gb|AEQ18336.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 183
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 5/80 (6%)
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
D + +RSLNGCRVTD+IL LVP NFR+TLR ++ WAKRRG+YS LGG +WA+LV
Sbjct: 1 DIRCIRSLNGCRVTDEILHLVP--NNFRSTLRAIKLWAKRRGIYSTFR-ILGG-SWAMLV 56
Query: 244 ARICQLYPNAVPSMLVSRFF 263
AR CQLY NA+ S LV +F+
Sbjct: 57 ARTCQLY-NAIASTLVHKFY 75
>gi|451855249|gb|EMD68541.1| hypothetical protein COCSADRAFT_178345 [Cochliobolus sativus ND90Pr]
Length = 1226
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 176/438 (40%), Gaps = 54/438 (12%)
Query: 25 LMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANA 84
LM + + L + + E+ R+E L +IV S D +
Sbjct: 609 LMDSSDMSSALEVHGMIPNDEQTTQRQEAFELLQRIV-------SDTSEDADTVQPGIPL 661
Query: 85 KIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDA 142
I GSY LGV +DID LC+G + + FF Q L + P+V L V
Sbjct: 662 VIVPVGSYALGVWTSSSDIDCLCIG---SISSKTFFKLARQRLVKAGNPQVRILRKVEAT 718
Query: 143 HVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 200
+++ +G+ +D+ Y + V E DI + N ++R L R +
Sbjct: 719 TGTMLELSVNGILMDMQYCPAAQVVERWSEFADIPASDPIFNLSMLSLRKLKPYRDLLYL 778
Query: 201 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--- 257
R +P FR R ++ W +RG+Y+ G+LGG++ L+++ +C+ + V S+
Sbjct: 779 QRTIPSRSLFRQAYRLIKLWGVQRGLYAAKFGYLGGMHITLMLSWVCKSLAHDVGSVNVA 838
Query: 258 -LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 316
+V FF+ Y + W N ++ A PR N + M I++ P N +
Sbjct: 839 DIVVSFFQHYANFDWSNDMVYDAF------FHKKKPRYN-RSTREPMVILSFHAPNSNFA 891
Query: 317 YNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT--------------FFEA 362
+ L++++ EF+ M+ +E + W F + F A
Sbjct: 892 QKSTVPGLQMLIKEFKAAD-----MKLSEPGMTWQKFFSTSSDLALKPCLPSGVVEFLNA 946
Query: 363 YKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKI-------ERHTYNMLQCHPHPGD 413
Y ++++IDI + GWVESR + + I E + L P D
Sbjct: 947 YSDFVKIDIQFWGRMLAKGKGLVGWVESRCISIVVDIHKALPGSEVRVWPALFTDDAPND 1006
Query: 414 FSDKSKPLYCSYFMGLQR 431
+D + C Y +GL +
Sbjct: 1007 STDSNDFQGC-YLIGLSK 1023
>gi|441666296|ref|XP_003275413.2| PREDICTED: poly(A) polymerase alpha [Nomascus leucogenys]
Length = 432
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 23/197 (11%)
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQK 58
Query: 363 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDK 417
YK+Y+ + SA W G VES++R L +E++ + L Q P P + DK
Sbjct: 59 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDK 118
Query: 418 SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISV 470
+ + +GL K+ E D+ ++ F +QA++ M+ + M+I+
Sbjct: 119 EE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAA 173
Query: 471 AHVTRRN----LPNFVF 483
HV R+ LPN V
Sbjct: 174 MHVKRKQLHQLLPNHVL 190
>gi|345562420|gb|EGX45488.1| hypothetical protein AOL_s00169g94 [Arthrobotrys oligospora ATCC
24927]
Length = 1237
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 177 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
+S L N T++ L R +L +P + +R R ++ WA+++GVYS+ GF GG
Sbjct: 728 NSPLWNLTVPTLKKLQAWRDLLFLLSRIPNLAKYRLAYRFIKLWAEKKGVYSSKFGFFGG 787
Query: 237 INWALLVARICQLY-PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN 295
++ +LL+AR+ L P A S L++ FF Y+ +W + V+ L Q R
Sbjct: 788 VHISLLLARVAMLLPPTATASQLIAAFFTHYSTTKWDDSVIFMPGTGKVLRYQ-----RA 842
Query: 296 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 355
+DK M I+T P +N + N + T+ + E ++ A K E D + +
Sbjct: 843 TRDK---MVILTINTPVINVAANATIHTVHTLSSELEK------AAAKFELDATFSDVVG 893
Query: 356 PF-------------TFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERH 400
F F Y Y+++D+ N R GWVESRL L +++ R
Sbjct: 894 SFGDDTSKEIPIGVNEFLGGYNRYIKVDVQFWGLNRQGGRALVGWVESRLVGLLVELGRQ 953
Query: 401 TYNMLQCHPHPGDFSD 416
T L PG F +
Sbjct: 954 TPG-LDARIWPGRFHE 968
>gi|452004284|gb|EMD96740.1| hypothetical protein COCHEDRAFT_1220308 [Cochliobolus heterostrophus
C5]
Length = 1226
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 158/377 (41%), Gaps = 47/377 (12%)
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAH 143
I GSY LGV +DID LC+G + + FF Q L + P+V L V A
Sbjct: 663 IVPVGSYALGVWTSSSDIDCLCIG---SISSKTFFKLARQRLVKAGNPQVRILRKVEAAT 719
Query: 144 VPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 201
+++ +G+ +DL Y + V E +I + N ++R L R +
Sbjct: 720 GTMLELSINGILMDLQYCPAAQVVERWSELAEIPASDPIFNLSMLSLRKLKPYRDLLYLQ 779
Query: 202 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM---- 257
R +P FR R ++ WA +RG+Y+ G+LGG++ L+++ +C+ + V S+
Sbjct: 780 RTIPSRSIFRQAYRLIKLWAVQRGLYAAKFGYLGGMHITLMLSWVCKSLAHNVGSVSIAD 839
Query: 258 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 317
+V FF+ Y + W N ++ A PR N + M I++ P N +
Sbjct: 840 IVVSFFQHYANFDWSNDMVYDAF------FHKKKPRYN-RSAREPMVILSFHAPNSNFAQ 892
Query: 318 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF--------EP------FTFFEAY 363
+ L+ ++ E + M+ +E + W F EP F Y
Sbjct: 893 KSTVPGLQTLIKELKAAD-----MKLSEPGMTWQKFFSTSSDLASEPRLPYGAVEFLNTY 947
Query: 364 KNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKI-------ERHTYNMLQCHPHPGDF 414
++++IDI ++ GWVESR + + I E + L P D
Sbjct: 948 NDFVKIDIQFWGRMLAKGKSLVGWVESRCISIVVDIHKALPGSEVRVWPALFTDDAPNDS 1007
Query: 415 SDKSKPLYCSYFMGLQR 431
+D + C Y +GL +
Sbjct: 1008 TDSNDFQGC-YLIGLSK 1023
>gi|396483666|ref|XP_003841760.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
gi|312218335|emb|CBX98281.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
Length = 1224
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 161/384 (41%), Gaps = 64/384 (16%)
Query: 90 GSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVM 147
GSY LGV +D+D LCVG + + FF + Q L + L V ++
Sbjct: 659 GSYALGVWTADSDLDCLCVG---SVSSKTFFKLVRQRLARARNRGIKILRKVEAKTGTML 715
Query: 148 KFKFSGVSIDLLY---ARLS-LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
+ G+S DL Y AR++ W E +S + N ++R L R I R
Sbjct: 716 ELSVDGISADLHYCPAARIAERW--SEFHGLSASDPIFNLPALSLRKLKSYRDFLYIQRT 773
Query: 204 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-----QLYPNAVPSML 258
+P + FRT RC++ WA +RG+YS+ G+L G + L++ IC Q P M+
Sbjct: 774 LPSLSAFRTAFRCIKLWAVQRGIYSSKFGYLSGTHITLMLTWICKKLRYQSGSVGPPDMV 833
Query: 259 VSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY--PCM 313
VS FF Y + W N +L A S + +YH P++ Y P
Sbjct: 834 VS-FFSYYANFDWTNELLFDAFFHES------------RPRYHRSAREPMVILGYHAPHS 880
Query: 314 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF-EPFT-------------- 358
N ++ +T L+I+M+EF+ ++ + + W F +P +
Sbjct: 881 NIAHTSTTPGLQILMNEFRAAADVLSS-----PGITWAKFFGDPSSLKDSVQLHLSQMTE 935
Query: 359 -FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
F +++ +++ + GW+ESR L + I + L+ P F+
Sbjct: 936 HFLATQHSFVTVEMQYWGRTLAKGKGLVGWIESRCLSLVVDIHK-MLPELEVRIWPTRFT 994
Query: 416 -DKS-----KPLYCSYFMGLQRKQ 433
DK+ K + Y +GL R +
Sbjct: 995 NDKADLKELKEYHGCYLIGLTRSE 1018
>gi|154282695|ref|XP_001542143.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410323|gb|EDN05711.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1178
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 140/599 (23%), Positives = 240/599 (40%), Gaps = 95/599 (15%)
Query: 1 MGSSNGQRLGI---TEPISL--AGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLG 55
+G++ G R I + PI + A P DD + + ++ D ++ S E A +R+
Sbjct: 557 LGTNGGGRGNIPVKSTPIDIEKAHPNFDDPVSLKICQE---DQSIVPSPESAEARKAAFL 613
Query: 56 RLDQIVKIWVKKISRAKGLNDQLLQEANAKIF--TFGSYRLGVHGPGADIDTLCVGPRHA 113
L I++ S ++ N + + + I T GS LGV +DID LCVG A
Sbjct: 614 LLKHIIQ----DGSLSEPSNGEEIGRSKFSIVVTTVGSSGLGVWTESSDIDCLCVGSISA 669
Query: 114 TREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDLLY----ARLSLWV 167
FF + Q L + V + V A +++ + +G+ DL Y A W+
Sbjct: 670 NV---FFELIIQRLRNRIDLGVKIIRRVKPAFGTMLELEINGIKFDLQYCPAAAVAKRWL 726
Query: 168 IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVY 227
E ++ Q S L N L R + R + FR R ++ WAK RG+Y
Sbjct: 727 --EVPNLPQSSPLFNLSLIPRMKLQPYRDQAYLQRTIRNPATFRLLHRIIKGWAKYRGIY 784
Query: 228 SNVAGFLGGINWALLVARICQLYPNAVPSM--LVSRFFRVYTQWRWPNPVLLCAIEEGSL 285
S+ G+LGGI+ L+++R+ +L P S ++ FF Y + W + I
Sbjct: 785 SSRFGYLGGIHITLMLSRLMKLLPPNPGSAADILCTFFNHYGNFNWEKDAVYDPIFHEK- 843
Query: 286 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 345
P RN + M I T P +N + + S ++R ++DE +R + +E
Sbjct: 844 ------PPRNYRPPREGMIIFTLHTPIINVARSTSIPSMRKIVDEMKRAENLI-----SE 892
Query: 346 ADVDWDTLFEPF-------------TFFEAYKNYLRIDISAENADDLR--NWKGWVESRL 390
+ +W L + F ++Y +Y++I++ + + + GWVESR
Sbjct: 893 GNANWAELLGVYPKPGKSALSSSADEFLKSYNSYIKINVQYWSLSLAKGSSLVGWVESRC 952
Query: 391 RQLTLKIERHTYNMLQCHPHPGDFS-----DKSKP------LYCSYFMGLQRKQGVPVGE 439
L + R + +Q P F+ + S P Y +GL++
Sbjct: 953 LDLLNDLYRE-FPDIQARIWPARFTQNEEHENSTPAQEEHEYQGCYLVGLRKAD------ 1005
Query: 440 GEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDS 499
D T +F + ++ TL+ M SVA + N K + S
Sbjct: 1006 -HATDPTRTFSKFDRKLAQNTLQA-SMDQSVASSVQSN----------------KKYFQS 1047
Query: 500 RRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTI 558
R +L R+ + DD + D T + + P S+ + R S I++ +
Sbjct: 1048 RLSLGRRFGNF-----DDNEAATEADSISSTRKKGTFLSTSKPVSTAKLRPASDILNRL 1101
>gi|164429482|ref|XP_001728545.1| hypothetical protein NCU11050 [Neurospora crassa OR74A]
gi|157073494|gb|EDO65454.1| predicted protein [Neurospora crassa OR74A]
Length = 1368
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 173/425 (40%), Gaps = 52/425 (12%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGL 74
I L P D L L++ + ++N+ SQEE R+ L I+ +
Sbjct: 703 IKLVTPLDGPLSEPGSLKEAMAELNILPSQEETDKRKAAFQALKAILLDTPPPSQSPQPP 762
Query: 75 NDQLLQEANAK---------IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
L + + I GS+ LGVH +DID L +GP T FF Q
Sbjct: 763 TTDLTTTSETQPRSNQPPLIITPVGSFALGVHTSSSDIDVLAIGPFSTT---TFFSLAIQ 819
Query: 126 ML---TEMPEVTELHP------VPDAHVPVMKFKFSGVSIDLLYARL----SLWVIPEDL 172
L + P ++ H + + +++ + DL Y S W P L
Sbjct: 820 RLRRASSSPLYSQEHQPKILRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHW--PRIL 877
Query: 173 DISQ-DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVA 231
+ + + + T+ L R D + R VP + FR R +R WAK RGVY+
Sbjct: 878 STAPPGNAVWSLPALTLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRF 937
Query: 232 GFLGGINWALLVARICQLYP-------NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS 284
G+LGGI ++++AR+ + LV+ FF Y Q+ W ++ +E
Sbjct: 938 GYLGGIQISVMLARVYKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVY---DEVC 994
Query: 285 LGLQVWDPRRNPKDKY-----HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE 339
L++ + K+ Y M ++ P +N+S S ++R + DEF+R ++
Sbjct: 995 PWLRLKREKGGEKEVYRRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKDEFKRARDL-- 1052
Query: 340 AMEKNEADVDWDTLFE---PFTFFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLT 394
+ K E W + F YK+Y+++D+ + + GW+ESR L
Sbjct: 1053 -LVKGEVK-SWKEFLKGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLL 1110
Query: 395 LKIER 399
+ + R
Sbjct: 1111 VDLHR 1115
>gi|296820870|ref|XP_002850004.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
gi|238837558|gb|EEQ27220.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
Length = 1204
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 149/345 (43%), Gaps = 41/345 (11%)
Query: 45 EEAV-SREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADI 103
EE + +R+ V+ L QI+ + I + G + E + GSY LG GP +DI
Sbjct: 614 EEGIKTRKSVVATLAQIL---TEPIHDSNGRD----IETPLVLIPVGSYGLGTWGPNSDI 666
Query: 104 DTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDLLYA 161
D LC+GP FF Q L + + + V A +++ + + +DL Y
Sbjct: 667 DCLCIGP---ISTSTFFSLAIQRLKKASAHGIRIMRKVKAATGMMLELQAGNIKLDLQYC 723
Query: 162 RLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCM 217
+ W E I + + ++ L R + I R+VP + F+ RC+
Sbjct: 724 PAANIAKRW--QEATKIPPHDPIFDLSIYSLSKLQPFRDQEYIKRMVPDMYVFQLAHRCI 781
Query: 218 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN-----AVPSMLVSRFFRVYTQWRWP 272
WAK GVYS+ G LGGI+ ++++R+ QL VP +L + FF Y + W
Sbjct: 782 TLWAKTSGVYSSKFGLLGGIHITMMLSRLHQLLHEDIGRVTVPELL-TMFFHHYANFDWK 840
Query: 273 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 332
N V+ + +P M I+T P +N + V+ S+LR ++ F+
Sbjct: 841 NKVVDSPGTRSKYRRLLREP----------MVILTVHIPTINVARAVTASSLRTIISAFK 890
Query: 333 RGHEICEAMEKNEADVDWDTLFE------PFTFFEAYKNYLRIDI 371
R E+ ++V DT F AY +Y+++++
Sbjct: 891 RVEELLAEDGARWSNVLSDTSISHNNQTGAEKFLVAYNSYIKVNV 935
>gi|302499068|ref|XP_003011530.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
gi|291175082|gb|EFE30890.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
Length = 1209
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 150/349 (42%), Gaps = 57/349 (16%)
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAH 143
+ GSY LG GP +D+D LC+G A FF Q L + + + V A
Sbjct: 649 LIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIRIVRKVKAAT 705
Query: 144 VPVMKFKFSGVSIDLLYARLS--------LWVIPEDLDISQDSILQNADEQTVRSLNGCR 195
+++ + + +DL Y + + IP S D I + ++ L R
Sbjct: 706 GVMLELQSGHIKLDLQYCPAANVAERWQEISRIP-----SHDPIF-DLSLHSLSKLQPYR 759
Query: 196 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL----YP 251
+ I R+VP + FR RC+ AK GVYS+ G LGGI+ ++++++ QL +
Sbjct: 760 DQEYIKRMVPDMYVFRLAYRCIVQRAKSSGVYSSKFGLLGGIHITMMLSQLHQLVHEKFG 819
Query: 252 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 311
LVS FF Y + W N +++ S G+Q RR+ ++ M I+T P
Sbjct: 820 RVTVPELVSMFFHYYAHFDWKNNMVV------SPGVQT-RYRRSLREP---MVILTVHVP 869
Query: 312 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-----------FF 360
+N + V+ +LR ++ F R E+ E W + + F
Sbjct: 870 TINVARAVTAPSLRTIVSAFNRAEELM-----GEDGARWSNILNDISISHNNQTGAEKFL 924
Query: 361 EAYKNYLRIDI-----SAENADDLRNWKGWVESRLRQLTLKIERHTYNM 404
AY +Y+++++ S A L GW+ESR +L ++R +
Sbjct: 925 TAYNSYIKVNVQYWGPSPTQASSL---IGWLESRFFRLLNDLDRQALGI 970
>gi|336268012|ref|XP_003348771.1| hypothetical protein SMAC_01794 [Sordaria macrospora k-hell]
gi|380094029|emb|CCC08246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1302
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 176/429 (41%), Gaps = 50/429 (11%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
L + I L P L L + + ++N++ S EE R+ L I+
Sbjct: 632 LALKTSIKLITPPAGPLSEPGSLTEAMAELNIFPSHEEISKRKAAFHALKIILLDNPPPN 691
Query: 69 SRAKGLNDQLL-QEANAK-------IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
+ + D E A+ I GS+ LGVH +DID L +GP FF
Sbjct: 692 QYPQAVTDTTTASETQARSNQPPLIITPVGSFALGVHTSSSDIDVLAIGPFSTN---TFF 748
Query: 121 GELHQML---TEMPEVTELHP-----VPDAHVPVMKFKFSGVSIDLLYARL----SLWVI 168
Q L + P + P + + +++ + + DL Y S W
Sbjct: 749 SLAIQRLRRASSSPLFSSYQPKILRRIYSSTGTMLELSVNQIKFDLQYCPAAHIASNW-- 806
Query: 169 PEDLDISQ-DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVY 227
P L + + + + T+ L R D + R VP + FRT R +R WAK RGVY
Sbjct: 807 PRILSTAPPGNAVWSLPALTLTKLKAARDLDYLRRTVPDLAVFRTAHRAVRSWAKARGVY 866
Query: 228 SNVAGFLGGINWALLVARI------CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI- 280
+ G+LGGI ++++AR+ Q LV+ FF Y ++ W ++ +
Sbjct: 867 AQRFGYLGGIQISVMLARVYKALALTQGVTRVGVEELVASFFEEYARFHWGRDMVYDEVC 926
Query: 281 ----EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 336
++ G + RR ++ M ++ P +N+S S ++R + +EF+R
Sbjct: 927 PWFRQKREKGGEKEVYRRTSREA---MVVLGWFGPGLNTSGQASVWSVRTLKEEFERAR- 982
Query: 337 ICEAMEKNEADVDWDTLFEPFT----FFEAYKNYLRIDISAENADDLR--NWKGWVESRL 390
+ + K E W E + F YK+Y+++D+ R + GW+ESRL
Sbjct: 983 --DQLVKEEVR-SWKEFLEGSSAAEEFLTGYKSYVKVDVQYWGLSPSRGAQFVGWLESRL 1039
Query: 391 RQLTLKIER 399
L + + R
Sbjct: 1040 VMLLVDLHR 1048
>gi|380475493|emb|CCF45225.1| endonuclease/Exonuclease/phosphatase [Colletotrichum higginsianum]
Length = 1195
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 172/419 (41%), Gaps = 62/419 (14%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFG 90
L + + ++N++ +++ R+E L L + + + DQ + G
Sbjct: 584 LRRCMENLNIFPTEQNEAVRKEALQLLQHTL------LDSDQTTGDQTRGRPAIMLVPVG 637
Query: 91 SYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAHVPVMK 148
SY LG +DID LC+G + FF Q L + P V L V +++
Sbjct: 638 SYGLGTWSRTSDIDCLCIG---SISPRVFFILARQRLRKSGNPGVRLLRKVKAKTGTMLE 694
Query: 149 FKFSGVSIDLLYAR----LSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 204
+ GV DL Y + + W P+ L + QT+ L R + R V
Sbjct: 695 VEILGVKCDLQYCQAPSVVEQW--PDMLKRPPSDPAFSLPMQTLLKLKPARDLFYLQRSV 752
Query: 205 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ--LYPNAVPSM--LVS 260
P + FR + + ++ WAK RG+Y+ G+LGGI+ ++++ ++C+ L+ V S +++
Sbjct: 753 PDLAQFRMSFQAIKTWAKARGIYAAKFGYLGGIHLSVMLVKVCKMLLHDGGVVSTADIIT 812
Query: 261 RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP-----IITPAYPCMNS 315
FF Y+Q W + V+DP + KYH P ++ P +N+
Sbjct: 813 TFFDHYSQLDWQRDM-------------VFDPFFHKNLKYHRTPREAMCLLGWHSPTLNT 859
Query: 316 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD-VDWDTLFE-------------PFTFFE 361
+ S T +I+ E+C+A + D W +L F
Sbjct: 860 ALTASVPTTKII------SAELCQATTQLSRDGTSWQSLLSIPDSSHSKNMTPGASNFLG 913
Query: 362 AYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
++++++ + + A R + GW+ESR L + + + L P F D S
Sbjct: 914 SFRSFINLRVHYWGASLERGSRLVGWLESRCASLLVDVNKRVPE-LSARIWPARFVDSS 971
>gi|407410523|gb|EKF32925.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 285
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 27/238 (11%)
Query: 223 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----PVLLC 278
RR VY N+ + G+ A++VAR+CQ+ P + P++L+ FF Y QW + PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARVCQVMPASHPNVLLRFFFLFYAQWLSRHDRISPVYIT 61
Query: 279 AIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 334
E G + GL WDPRR+ + L+P+I PAYP +N + NVS L + E
Sbjct: 62 TSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVSRCGLEVFYAELTYA 120
Query: 335 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD------LRNWKGWVES 388
H + + ++ +T+++PF + Y + ++++ E + L W +V S
Sbjct: 121 HRLL-----SNSETPLETIWKPFNILDNYSTFFVVNVTCEEETEEKLEAVLSVWSSYVLS 175
Query: 389 RLRQLTLKIERHTYNMLQCHPHPGDFSD---KSKPLYCSYFMGLQRKQGVPVGEGEQF 443
+LR L +ER ++ P+P +D +S P + G G+ G +F
Sbjct: 176 KLRILLYALER----IVDARPYPQKLNDVPLRSVPKSGCFLKGSSFIVGIREKVGRRF 229
>gi|429849228|gb|ELA24631.1| duf455 domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 1201
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 191/467 (40%), Gaps = 73/467 (15%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIV 61
GSS R+ E G D L++ L +++ ++++ +R++ LG L I
Sbjct: 560 GSSTSARVVPVEAKRAPGSMSD----VTALKQTLELLDVVPAEKDERTRKQALGLLRMI- 614
Query: 62 KIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
+W + + +Q + + GSY LGV +DID LC+G + FF
Sbjct: 615 -LWENEQTNV----EQSRGQPALVLVPVGSYGLGVWSKSSDIDCLCIG---SISPRVFFT 666
Query: 122 -ELHQMLTEMPE-VTELHPVPDAHVPVMKFKFSGVSIDLLYARLS----LWVIPEDLDIS 175
H++ + E V L V +++ + G+ DL Y + + W P L
Sbjct: 667 LARHRLRKSVGEGVRILRQVKAKTGTMLEIEVLGLRCDLQYCQAASVANQW--PNLLKRP 724
Query: 176 QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 235
+ QT+ L R I R VP + FR + ++ WAK G+Y+ G+LG
Sbjct: 725 PSDAAFSLPTQTLLKLKPARDMYYIARSVPDLAQFRVCYQVIKTWAKANGIYAAKFGYLG 784
Query: 236 GINWALLVARICQLYPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD 291
G++ ++++ R+C++ + + ++ +++ FF Y + W N + V+D
Sbjct: 785 GVHLSVMLVRVCKMLLHGMGTVSTADVIATFFDHYAHFDWKNDI-------------VFD 831
Query: 292 PRRNPKDKYHLMP-----IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEA 346
P + + +YH P ++ P +N++ S T++I+ E + +A K
Sbjct: 832 PFFHKQLRYHRTPREAMCLLGWHSPTLNTALIASVPTVKIISTELR------QANAKFTE 885
Query: 347 DVDWDTLFE-------------PFTFFEAYKNY--LRIDISAENADDLRNWKGWVESRLR 391
W ++ +F ++K + LRI + + GW+ESR
Sbjct: 886 GATWQSILSAPGMIAEKDLSQGAASFLSSFKTFVNLRIHYWGGSLERGSRLVGWLESRCA 945
Query: 392 QLTLKIERHTYNMLQCHPHPGDFSDKSKP--------LYCSYFMGLQ 430
L + I R L P F D + P SY +GL+
Sbjct: 946 SLLVDINRKVPE-LAPRIWPARFVDAATPNSQCQQSEYQGSYLVGLK 991
>gi|346325053|gb|EGX94650.1| DUF455 domain protein [Cordyceps militaris CM01]
Length = 1223
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 155/366 (42%), Gaps = 41/366 (11%)
Query: 75 NDQLLQEANAK------IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
NDQ + A+ + GS+ LGV +D+D LC+G + FF Q L
Sbjct: 634 NDQTKSDQEARTPVGLVLVPVGSFGLGVWMSSSDVDCLCIG---TISSKTFFRMALQRLR 690
Query: 129 EMPE--VTELHPVPDAHVPVMKFKFSGVSIDLLY-ARLSLW-VIPEDLDISQDSILQNAD 184
+ + + L V +++ + G+ DL Y A S++ P +++ + +
Sbjct: 691 KASDQGIRVLRKVLANTGTMLELQILGIKFDLHYCAATSVFEKFPSVMNLPSNHPEFSLP 750
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
QT+ L R +LR +P + FR ++ WA RG+Y G LGGI+ +L+
Sbjct: 751 VQTLAKLKPARDMYYLLRSIPDLAKFRVAFLMIKAWASSRGIYGARFGLLGGIHITVLLV 810
Query: 245 RICQ----LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
IC+ L + +++ FF YT + W V+L L R ++ +
Sbjct: 811 PICKQLATLSRVVSTTGILATFFSHYTNFDWEKQVVLDPFFHKELRYH-----RTSREPF 865
Query: 301 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF--- 357
L+ PA +N++ ST T++ + E + + + ++ V WD + P
Sbjct: 866 CLLGWHAPA---LNTAMTASTPTVKSIATEISKTNSLL-----SQPGVTWDAILGPVGAA 917
Query: 358 -----TFFEAYKNYLRID--ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH 410
F +K+Y+++D + R + GW+ESR + + + R +L
Sbjct: 918 VAGVQDFLRGFKSYVKVDARFWGSSPSSGRKFLGWLESRCVAILVDMNRKAPALLP-RIW 976
Query: 411 PGDFSD 416
PG F D
Sbjct: 977 PGRFID 982
>gi|169617838|ref|XP_001802333.1| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
gi|160703499|gb|EAT80511.2| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
Length = 1179
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 178/449 (39%), Gaps = 87/449 (19%)
Query: 18 AGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQ 77
AGP L ++ +L+ L ++ S+EE R++ L L ++V +D
Sbjct: 601 AGPC---LSQSAELDSVLASGGMFPSEEEVQQRKDALEILKRVVY---------GTSSDD 648
Query: 78 LLQEANAK--IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTE 135
+ ++ I GSY LGV G+DID LC+G + FF Q L +
Sbjct: 649 VTSTSDVPMIIVPVGSYALGVWTSGSDIDCLCIG---TISSKTFFKLARQRLVK------ 699
Query: 136 LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR 195
D V V++ K + +L +P I SIL ++R L R
Sbjct: 700 ---AHDQGVRVLR-KVEANTGTMLELWSEFAGLPASDPIFNLSIL------SLRKLKPYR 749
Query: 196 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP 255
I R +P + FR RC++ WA RRG+YS G+LGG++ L+++ + +
Sbjct: 750 DLLYIQRTLPSLSAFRLAYRCIKLWAVRRGIYSAKFGYLGGVHITLMLSWAAKCLAHDSG 809
Query: 256 SM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITP 308
S+ LVS FF + + W N ++ A K +YH P++
Sbjct: 810 SITAPDLVSSFFHHFAHFNWTNDMMYDAF------------FHKQKPRYHRSAREPMVVL 857
Query: 309 AY--PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF-----------E 355
+ P N ++ + L ++ E + E ++ + W F
Sbjct: 858 GFHAPNSNIAHTSTLPGLHTLVSEMKAADEAL-----SDPSMTWKKFFGSTDNSPQAALS 912
Query: 356 PFT----FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNM---LQ 406
P + F A+ +Y++IDI ++ GWVESR L + I Y M L
Sbjct: 913 PISGASDFLSAHSSYVKIDIQFWGRTLAKGKSLVGWVESRCLSLVVDI----YKMLPDLA 968
Query: 407 CHPHPGDFSD----KSKPLYCSYFMGLQR 431
P F+D + + Y +GL R
Sbjct: 969 VRIWPARFTDSDTIEGGDYHGCYLIGLSR 997
>gi|225561466|gb|EEH09746.1| DUF455 domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 1256
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 150/353 (42%), Gaps = 41/353 (11%)
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAH 143
+ T GS LGV +DID LCV A FF + Q L + V + V A
Sbjct: 683 VTTVGSSGLGVWTESSDIDCLCVSSISANV---FFELIIQRLRNRIDLGVKIIRRVKPAF 739
Query: 144 VPVMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 199
+++ + +G+ DL Y A W+ E ++ Q S L N L R
Sbjct: 740 GTMLELEINGIKFDLQYCPAAAVAERWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQAY 797
Query: 200 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM-- 257
+ R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S
Sbjct: 798 LQRTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLMKLLPPNPGSAAD 857
Query: 258 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 317
++ FF Y + W + I G P RN + M I T P +N +
Sbjct: 858 ILCTFFNHYGNFNWGKDAVYDPIFHGK-------PPRNYRPPREGMIIFTLHTPIINVAR 910
Query: 318 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------------TFFEAYK 364
+ S ++R ++DE +R + +E + +W L + F ++Y
Sbjct: 911 STSIPSMRKIVDEMKRAENLI-----SEGNANWAELLGIYPKTGKSALSSSADEFLKSYN 965
Query: 365 NYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
+Y++I++ + + + GWVESR L + R + +Q P F+
Sbjct: 966 SYIKINVQYWSLSLAKGSSLVGWVESRCLDLLDDLYRE-FPDIQARIWPARFT 1017
>gi|367045862|ref|XP_003653311.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
gi|347000573|gb|AEO66975.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
Length = 1221
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 167/421 (39%), Gaps = 56/421 (13%)
Query: 25 LMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANA 84
L R +++ L ++ S EE RE L L + + +++ G L +
Sbjct: 592 LARPGSVKEALVELGAIPSAEETAQREAALDLLKSV--LLDTPAAKSAGTKSSL---SPV 646
Query: 85 KIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDA 142
+ GSY L V +DID LC+GP +FF Q L + + L V
Sbjct: 647 VVVPVGSYALDVWTSSSDIDVLCIGP---FSTHNFFALASQRLRKAAGQGIRILRRVRAN 703
Query: 143 HVPVMKFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 198
+++ + G+ +DL Y + W P L + + QT+ L R D
Sbjct: 704 TGTMLEIEVDGIKMDLQYCPATSVAERW--PHVLQTPASDPVWSLSAQTLSKLKAVRDVD 761
Query: 199 QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY-----PNA 253
I R VP + FR R ++ WAK RG+YS GFL GI ++L+AR+ +L P +
Sbjct: 762 YIRRSVPDLAAFRLAHRFIKTWAKSRGIYSARFGFLSGIQISILLARVQKLLARESGPCS 821
Query: 254 VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP----RRNPKDKYHLMPIITPA 309
V +L + FF Y + W +DP R P + P+
Sbjct: 822 VEDLLAT-FFTHYAAFDWS-------------ARPAFDPLFHRHRLPYTRTPREPLAVLG 867
Query: 310 Y--PCMNSSYNVSTSTLRIMMDEFQR-GHEICEAMEKNEADVDWD-----------TLFE 355
Y P +N++ S +++ + EF+R G + + + D
Sbjct: 868 YFPPSLNTAAAASVPSVKTLAAEFRRAGAAFLSSSSSSSSSSSSDPHPARSWSSLAAPSA 927
Query: 356 PFTFFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPHPGD 413
F A+++Y+R+D+ R + GW+ESR L + + R L PG
Sbjct: 928 ASDFLAAHRSYVRLDVQYWGLPRARGAQLLGWLESRCAALLVDLHRRAPG-LHARMWPGR 986
Query: 414 F 414
F
Sbjct: 987 F 987
>gi|407849942|gb|EKG04508.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 285
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 24/208 (11%)
Query: 223 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----PVLLC 278
RR VY N+ + G+ A++VARICQ+ P + P++L+ FF YTQW + PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 279 AIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 334
E G + GL WDPRR+ + L+P+I PAYP +N + NV +L + E
Sbjct: 62 TSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYA 120
Query: 335 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD------LRNWKGWVES 388
+ + +E +T++EP+ + Y + + ++ E ++ L W +V S
Sbjct: 121 YRLLSNLE-----TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLS 175
Query: 389 RLRQLTLKIERHTYNMLQCHPHPGDFSD 416
+LR L +ER ++ P+P +D
Sbjct: 176 KLRILLYALER----LVDARPYPQKLND 199
>gi|239612757|gb|EEQ89744.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 1266
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 179/418 (42%), Gaps = 61/418 (14%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIW-VKKISRAKGLNDQLLQEANAKIFTF 89
L+ L D ++ S E+A R+ L +++ + + + K ++ L + + T
Sbjct: 628 LKVCLADKSIVPSSEDAEKRKAAFSLLKNLIQHGSLPESGKGKEIDQPRL---SIVVTTV 684
Query: 90 GSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVM 147
GSY LGV +D+D LCVG + + FF Q L + E V L V A ++
Sbjct: 685 GSYGLGVWTDSSDVDCLCVG---SISSKVFFELTLQRLKKGAEWDVKILRKVKAATGTML 741
Query: 148 KFKFSGVSIDLLY----ARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 202
+ + + V DL Y A W+ +P + + S L + + L R + R
Sbjct: 742 ELEINSVKFDLQYCPAAAVAERWLEVPH---LPRSSPLFDLALLPLMKLQPYRDQAYLQR 798
Query: 203 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----L 258
VP FR R ++ WAK RG+YS+ G+LGGI+ ++++++ +L P+ P+ +
Sbjct: 799 TVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPAPSAADI 858
Query: 259 VSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK-YHLMP-----IITPAYPC 312
+ FF Y + W V+ +DP + K YH P I+T P
Sbjct: 859 LCTFFNYYGNFNWKEGVM-------------YDPSFHKKPPLYHRTPQEGMVILTLHAPV 905
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-------------F 359
MN + + S + R ++DE +R + +E + +W L F
Sbjct: 906 MNVARSASIPSTRTIVDEMKRADNLI-----SEGNTNWAELVGIVANTGKSSLSVSGDEF 960
Query: 360 FEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
+Y +Y++I++ + + GW+ESR L + R + +Q P F+
Sbjct: 961 LRSYNSYIKINVQYWGLSLAKGSSLVGWLESRCLVLLADLHRK-FPDIQTRIWPARFT 1017
>gi|71409419|ref|XP_807056.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70870970|gb|EAN85205.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 285
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 24/208 (11%)
Query: 223 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----PVLLC 278
RR VY N+ + G+ A++VARICQ+ P + P++L+ FF YTQW + PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 279 AIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 334
E G + GL WDPRR+ + L+P+I PAYP +N + NV L + E
Sbjct: 62 TSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCGLEVFYAELTYA 120
Query: 335 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD------LRNWKGWVES 388
+ + +E +T++EP+ + Y + + ++ E ++ L W +V S
Sbjct: 121 YRLLSNLE-----TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLS 175
Query: 389 RLRQLTLKIERHTYNMLQCHPHPGDFSD 416
+LR L +ER ++ P+P +D
Sbjct: 176 KLRILLYALER----IVDARPYPQKLND 199
>gi|53136848|emb|CAG32753.1| hypothetical protein RCJMB04_34p17 [Gallus gallus]
Length = 109
Score = 89.0 bits (219), Expect = 9e-15, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 60/88 (68%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
GIT PISLA P + D M T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS
Sbjct: 20 GITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREIS 79
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVH 97
+K L +++ KIFTFGSYRLGVH
Sbjct: 80 ESKNLPQSVIENVGGKIFTFGSYRLGVH 107
>gi|302882405|ref|XP_003040113.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
gi|256720980|gb|EEU34400.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
Length = 1208
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 171/403 (42%), Gaps = 55/403 (13%)
Query: 90 GSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVM 147
GSY LGV +DID LC+G + + FF Q L + L V ++
Sbjct: 648 GSYGLGVWTSSSDIDCLCIG---SISPKIFFALAVQRLRRAVTGGIRILRRVKANSGYML 704
Query: 148 KFKFSGVSIDLLY-ARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 203
+ + G+ +DL Y A S+ W PE + QT+ L R + R
Sbjct: 705 ELEVHGIKMDLQYCAAASIAERW--PEVMKRPASDPAFALPFQTLAKLKPVRDLFYLRRS 762
Query: 204 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LV 259
+P + +R ++ WA+ RG+YS GFLGGI+ ++L+A +C++ N ++ ++
Sbjct: 763 IPDMVQYRMAHLFIKAWAQSRGIYSAKFGFLGGIHISVLLAPLCKMLANDGATVSTADII 822
Query: 260 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY--PCMN 314
FF+ Y ++ W + V+DP + +Y+ P+ + P +N
Sbjct: 823 FTFFQHYARFSWKTAL-------------VFDPFFHKDLRYNRTFREPLCLLGWHAPALN 869
Query: 315 SSYNVSTSTLRIMMDEFQRGHEICEA-------MEKNEADVDWDTLFEPFT--FFEAYKN 365
++ N S T+ + EF+R + + E D +L P F + YK+
Sbjct: 870 TAVNASVPTVDAIAAEFERAERLLSVENFSWSNLLGVEPDSPPSSLSGPGATEFLQNYKS 929
Query: 366 YLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-- 421
Y++ID ++ + GW+ESR L + ++R N + P F D + +
Sbjct: 930 YIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDLDRKVKN-IHARIWPARFLDMASSVEG 988
Query: 422 -----YCSYFMGLQRKQGVPV---GEGEQFDIRLTVKEFKQAV 456
+ Y +GL R P + Q ++ ++EF+ +
Sbjct: 989 PGTEYHGHYLIGLSRNGEEPNKDDAKATQVALQAALQEFEARI 1031
>gi|336471290|gb|EGO59451.1| hypothetical protein NEUTE1DRAFT_79561 [Neurospora tetrasperma FGSC
2508]
Length = 1329
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 170/427 (39%), Gaps = 56/427 (13%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGL 74
I L P D L L++ + ++N+ SQEE R+ L I+ +
Sbjct: 664 IKLVKPLDGPLSEPGSLKEAMAELNILPSQEETDKRKAAFQALKAILLDTPPPSQSPQPS 723
Query: 75 NDQLLQEANAK---------IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
L + + I GS+ LGVH +DID L +GP T FF Q
Sbjct: 724 TTDLTTTSETQPRSNQPPLIITPVGSFALGVHTSSSDIDVLAIGPFSTT---TFFSLAIQ 780
Query: 126 MLTE-----------MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL----SLWVIPE 170
L P++ L + + +++ + DL Y S W P
Sbjct: 781 RLRRAASSPLYSQEYQPKI--LRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHW--PR 836
Query: 171 DLDISQ-DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSN 229
L + + + + T+ L R D + R VP + FR R +R WAK RGVY+
Sbjct: 837 ILSTAPPGNAVWSLPALTLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQ 896
Query: 230 VAGFLGGINWALLVARICQLYP-------NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE 282
G+LGGI ++++AR+ + LV+ FF Y Q+ W ++ +E
Sbjct: 897 RFGYLGGIQISVMLARVYKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVY---DE 953
Query: 283 GSLGLQVWDPRRNPKDKY-----HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 337
+ + K+ Y M ++ P +N+S S ++R + +EF+R ++
Sbjct: 954 VCPWFRQKREKGGEKEVYKRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDL 1013
Query: 338 CEAMEKNEADVDWDTLFE---PFTFFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQ 392
+ K E W + F YK+Y+++D+ + + GW+ESR
Sbjct: 1014 ---LVKGEVK-SWKEFLKGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVM 1069
Query: 393 LTLKIER 399
L + + R
Sbjct: 1070 LLVDLHR 1076
>gi|350292383|gb|EGZ73578.1| hypothetical protein NEUTE2DRAFT_108297 [Neurospora tetrasperma FGSC
2509]
Length = 1330
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 170/427 (39%), Gaps = 56/427 (13%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGL 74
I L P D L L++ + ++N+ SQEE R+ L I+ +
Sbjct: 665 IKLVKPLDGPLSEPGSLKEAMAELNILPSQEETDKRKAAFQALKAILLDTPPPSQSPQPS 724
Query: 75 NDQLLQEANAK---------IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
L + + I GS+ LGVH +DID L +GP T FF Q
Sbjct: 725 TTDLTTTSETQPRSNQPPLIITPVGSFALGVHTSSSDIDVLAIGPFSTT---TFFSLAIQ 781
Query: 126 MLTE-----------MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL----SLWVIPE 170
L P++ L + + +++ + DL Y S W P
Sbjct: 782 RLRRAASSPLYSQEYQPKI--LRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHW--PR 837
Query: 171 DLDISQ-DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSN 229
L + + + + T+ L R D + R VP + FR R +R WAK RGVY+
Sbjct: 838 ILSTAPPGNAVWSLPALTLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQ 897
Query: 230 VAGFLGGINWALLVARICQLYP-------NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE 282
G+LGGI ++++AR+ + LV+ FF Y Q+ W ++ +E
Sbjct: 898 RFGYLGGIQISVMLARVYKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVY---DE 954
Query: 283 GSLGLQVWDPRRNPKDKY-----HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 337
+ + K+ Y M ++ P +N+S S ++R + +EF+R ++
Sbjct: 955 VCPWFRQKREKGGEKEVYKRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDL 1014
Query: 338 CEAMEKNEADVDWDTLFE---PFTFFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQ 392
+ K E W + F YK+Y+++D+ + + GW+ESR
Sbjct: 1015 ---LVKGEVK-SWKEFLKGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVM 1070
Query: 393 LTLKIER 399
L + + R
Sbjct: 1071 LLVDLHR 1077
>gi|119186269|ref|XP_001243741.1| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1172
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 17/270 (6%)
Query: 11 ITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRL-DQIVKIWVKKIS 69
I+ P SLA P + L L+ LR+ ++ ++E+ R VL L + I+ ++
Sbjct: 606 ISIPSSLATPAN--LSDKHDLDLCLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVD 663
Query: 70 RAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 129
N++ + + GSY LGV P +D+D L +GP + FF Q L
Sbjct: 664 ENGHSNNE--PDIAMVLVPVGSYGLGVWSPSSDVDCLSIGP---ISSKIFFAIAEQRLRR 718
Query: 130 MPE--VTELHPVPDAHVPVMKFKFSGVSIDLLY---ARLSLWVIPEDLDISQDSILQNAD 184
+ + L V A +++ + +G+ DL Y AR+ L D I +
Sbjct: 719 AADSGIRILRKVKAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF-DLS 777
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
Q + L R D I R +P + FRT R + WAK RGVY + G+LGGI+ ++++
Sbjct: 778 YQALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLS 837
Query: 245 RICQLYPNAV---PSMLVSRFFRVYTQWRW 271
R+ +L+ V + ++ RFF+ Y + W
Sbjct: 838 RVFKLFCGEVRVTSTDMIYRFFQYYADFDW 867
>gi|83774635|dbj|BAE64758.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 457
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 45/262 (17%)
Query: 202 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM---- 257
R +P + +FR R ++ WA+RRG+YS+ G+LGGI+ LL+ARIC L ++
Sbjct: 6 RTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAAD 65
Query: 258 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 317
+++ FF+ Y Q+ W V+ S + + P+R P + I++ P +N +
Sbjct: 66 IITTFFKHYAQFNWEKQVVYDPSFYKS-PPRYFRPQREP------LVILSQHQPKVNVAR 118
Query: 318 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL---FEPFT----FFEAYKNYLRID 370
S + R ++ EFQR ++ ++ DV W+ L E T F ++Y++Y +++
Sbjct: 119 AASIPSTRTLVQEFQRADKLL-----SQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVN 173
Query: 371 IS--AENADDLRNWKGWVESRLRQLTLKIER-HTYNMLQCHPH-----------PGDFSD 416
+ A R GW+E R ++L + R H Q H H P F+D
Sbjct: 174 VQYWGGAATKGRMLVGWLEWRC--VSLLVGRLHPLPTFQRHIHRKFPDIHARIWPARFTD 231
Query: 417 ------KSKPLYCSYFMGLQRK 432
+K Y +GL R+
Sbjct: 232 MEEVGETTKEYQGCYLIGLTRE 253
>gi|46110072|ref|XP_382094.1| hypothetical protein FG01918.1 [Gibberella zeae PH-1]
Length = 1200
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 153/360 (42%), Gaps = 51/360 (14%)
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 145
+ GSY LGV +DID LC+GP + + FF Q L ++ + V
Sbjct: 642 VVPVGSYGLGVWTSSSDIDCLCIGPFSS---KTFFALAVQRLKRAADIRIIRRVKANSGY 698
Query: 146 VMKFKFSGVSIDLLY-ARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 201
+++ + G+ +DL Y A S+ W PE + + QT+ L R +
Sbjct: 699 MLELEVHGIKVDLQYCAAASIAERW--PEVMKRPANDSAFALPFQTLAKLKPVRDLFYLR 756
Query: 202 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA----VPSM 257
R +P + +R ++ WA+ RG+YS GFLGGI+ ++L+ IC+ + P+
Sbjct: 757 RSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPICKALASGSETVSPTD 816
Query: 258 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPAYPC 312
+V FFR Y+ + W + V+DP + +Y+ + +I P
Sbjct: 817 IVVTFFRHYSNFDWKTSM-------------VFDPFFHKDLRYNRTFREPLCLIGWHAPA 863
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF------------EPFTFF 360
+N++ S T+ + E +R + + +E W+++ F
Sbjct: 864 LNTAPIASNPTVMTIAAEIERANRLL-----SENGCTWNSVLGLQSAQEAGKSRGATEFL 918
Query: 361 EAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
+ +K Y++ID ++ + GW+ESR L + + R +++ P F D S
Sbjct: 919 KEFKTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDVNRKLQHLV-ARIWPSRFLDTS 977
>gi|408391246|gb|EKJ70626.1| hypothetical protein FPSE_09136 [Fusarium pseudograminearum CS3096]
Length = 1200
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 172/408 (42%), Gaps = 55/408 (13%)
Query: 25 LMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANA 84
L+ LE +L + +++E +R + + L+ + +K + + D
Sbjct: 586 LVEGEGLEHFLENYGCLPTEQERANRAQAVRALE----VALKDVDLSAS-EDDARSGPPF 640
Query: 85 KIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 144
+ GSY LGV +DID LC+GP + + FF Q L ++ + V
Sbjct: 641 VVVPVGSYGLGVWTSSSDIDCLCIGPFSS---KTFFALAVQRLKRAADIRIIRRVKANSG 697
Query: 145 PVMKFKFSGVSIDLLY-ARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 200
+++ + G+ +DL Y A S+ W PE + + QT+ L R +
Sbjct: 698 YMLELEVHGIKVDLQYCAAASIAERW--PEVMKRPANDSAFALPFQTLAKLKPVRDLFYL 755
Query: 201 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA----VPS 256
R +P + +R ++ WA+ RG+YS GFLGGI+ ++L+ IC+ + P+
Sbjct: 756 RRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPICKALASGSEIVSPT 815
Query: 257 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPAYP 311
+V FFR Y+ + W + V+DP + +Y+ + +I P
Sbjct: 816 DIVVTFFRHYSNFDWKTSM-------------VFDPFFHKDLRYNRTFREPLCLIGWHAP 862
Query: 312 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF------------EPFTF 359
+N++ S T+ + E +R + + +E W+++ F
Sbjct: 863 ALNTAPIASNPTVMAIAAEIERANRLL-----SEDGCTWNSVLGLQSAQEAGKSRGATEF 917
Query: 360 FEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNML 405
+ +K Y++ID ++ + GW+ESR L + + R +++
Sbjct: 918 LKEFKTYVKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDVNRKLQHLV 965
>gi|340521883|gb|EGR52117.1| predicted protein [Trichoderma reesei QM6a]
Length = 1224
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 157/383 (40%), Gaps = 57/383 (14%)
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAH 143
+ GS+ LGV +D+D LCVG FF Q L + + L V
Sbjct: 660 VIPVGSFGLGVWTSSSDVDCLCVG---NISSRTFFALAIQKLRKASANGIKILRRVKANS 716
Query: 144 VPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 201
+++ + G+ DL Y + PE + Q++ L R +
Sbjct: 717 GTMLELEIRGIKFDLQYCSAAAIAQGYPEVFKRPSSDPIFALPLQSLAKLKPARDLFYLR 776
Query: 202 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN----AVPSM 257
R +P + +R ++ WAK RG+Y+ G LGGI+ ++ +C+ N A +
Sbjct: 777 RSIPDMTKYRVAHLVIKAWAKSRGLYAAKFGLLGGIHITSMLVPVCKALANEPEAASTAD 836
Query: 258 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY--PC 312
+++ FF Y+ + W V V+DP + + +YH P+ + P
Sbjct: 837 VLTSFFHHYSTFDWATGV-------------VYDPFYHTELRYHRTFREPLCLLGWHGPS 883
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICE----------AMEKNEADVDWDTLFE--PFTFF 360
+N++ + S ST+ + EF R + +E++E+ +L E F
Sbjct: 884 LNTASSASISTVNALASEFTRAATLLSQEGMTWSKFLGVEQSESP---SSLLEKGAADFL 940
Query: 361 EAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 418
++Y+ Y++I + R + GW+ESRL + + I R + ++ P F+D+
Sbjct: 941 DSYRTYIKISARYWGSSQQKGRKYLGWLESRLISILVDISRKSPGIVP-RIWPARFTDEE 999
Query: 419 KP----------LYCSYFMGLQR 431
+ L Y +GL++
Sbjct: 1000 QSSSNTDAENPELTACYLIGLKK 1022
>gi|361066261|gb|AEW07442.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142733|gb|AFG52754.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142735|gb|AFG52755.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142737|gb|AFG52756.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142739|gb|AFG52757.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142741|gb|AFG52758.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142743|gb|AFG52759.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142745|gb|AFG52760.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142747|gb|AFG52761.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142749|gb|AFG52762.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142751|gb|AFG52763.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142753|gb|AFG52764.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142755|gb|AFG52765.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142757|gb|AFG52766.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142759|gb|AFG52767.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
Length = 104
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 48/55 (87%)
Query: 440 GEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 494
GEQFDIR+TV EF+ +V MYTL KPGM+I+V+H+ RR++P+FVFPGGVRP R +K
Sbjct: 1 GEQFDIRVTVDEFRHSVKMYTLWKPGMEINVSHIKRRSIPSFVFPGGVRPPRTTK 55
>gi|407922599|gb|EKG15696.1| Endonuclease/exonuclease/phosphatase [Macrophomina phaseolina MS6]
Length = 1142
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 147/367 (40%), Gaps = 39/367 (10%)
Query: 146 VMKFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 201
+++ G+ +DL Y + W P L + L + QT+ L R +
Sbjct: 645 MLELNIQGIRLDLQYCAAAQIAGCW--PAPLSLPPTDPLFSLPLQTLSKLKAIRDLAHLQ 702
Query: 202 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA----VPSM 257
P + F+ R + WA+ RG+Y+ G+L G + +L++ RI +L ++ +
Sbjct: 703 NTTPDLPAFQMAYRLLVVWARSRGIYAARFGYLSGTHISLMLDRIAKLLYHSNRDVTAAD 762
Query: 258 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY--PCMNS 315
LV FFR Y ++ W + + G+ P ++ P++ Y P +N
Sbjct: 763 LVCAFFRYYAEFDWSKNTVEDPLARAIPGMG------RPYQRHASEPMVVLGYHIPRVNI 816
Query: 316 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF-----EPFTFFEAYKNYLRID 370
+ + + ++ +E QR H + + + W + F AY++Y+R+D
Sbjct: 817 ARAATVPAVGVLTEELQRAHALVTKQPEQGSTPTWAEIIGEERNSAAEFLSAYRSYIRVD 876
Query: 371 ISAENADDL--RNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLYCS 424
+ + R GWVESR L + + R + P F S++ +
Sbjct: 877 VQYWGTSSVKGRQLIGWVESRCPTLLIDLNRKIPE-IHARMWPLRFARGASNEKGDQHGC 935
Query: 425 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ---------ISVAHVTR 475
Y +GL ++Q + D +L + + ++ + G + + V+HV+R
Sbjct: 936 YLVGLAKRQDSDSDSKTEADRKLAQSKLDGVLERFSDQIRGNEKFFDPTSGWVEVSHVSR 995
Query: 476 RNLPNFV 482
L +
Sbjct: 996 AKLEELI 1002
>gi|295664162|ref|XP_002792633.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278747|gb|EEH34313.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1260
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 177/410 (43%), Gaps = 47/410 (11%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFG 90
L+ +L D +++ S E+A R+ L +++ + + ++ + + G
Sbjct: 629 LKLFLADRSIFPSPEDAEKRKAAFECLKHLIQ--HGSLPESGETHETERSNFSFIVTAVG 686
Query: 91 SYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMK 148
SY LGV +D+D LCVGP FF Q L + + V L V A + +
Sbjct: 687 SYGLGVWTNSSDVDCLCVGP---VSSRTFFELAMQRLRKGADSGVKILRKVKAATGTMWE 743
Query: 149 FKFSGVSIDLLYARLSLWVIPEDLDISQ----DSILQNADEQTVRSLNGCRVTDQILRLV 204
+ GV DL Y V L++S D + A V+ L R + R +
Sbjct: 744 LEVRGVKFDLQYCPAGA-VAERWLEVSHLPRADPLFDLAYLSLVK-LQPHRDQTYLQRTI 801
Query: 205 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--LVSRF 262
FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S+ ++ F
Sbjct: 802 QNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTASVADILRTF 861
Query: 263 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR--RNPKDKYHLMPIITPAYPCMNSSYNVS 320
F Y + W ++ I PR R+P++ M I+T YP MN + S
Sbjct: 862 FNHYADFYWMEGMVYDMI------FHRKQPRYNRSPREG---MVILTLHYPIMNVARTAS 912
Query: 321 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF-------EPF------TFFEAYKNYL 367
S++R ++DE R + +E + W +L +P F ++Y +Y+
Sbjct: 913 ISSMRTIVDEMDRADTLI-----SEGRLRWTSLVGITPQAGQPTLSNSADEFLKSYNSYI 967
Query: 368 RIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
+I++ + + GW+ESR L I R + LQ P F+
Sbjct: 968 KINVQYWGLSLAKGSSLIGWLESRCLFLLADIHRKLPD-LQTRIWPARFT 1016
>gi|358389108|gb|EHK26701.1| hypothetical protein TRIVIDRAFT_59177 [Trichoderma virens Gv29-8]
Length = 1215
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 170/440 (38%), Gaps = 89/440 (20%)
Query: 75 NDQLLQEANAK------IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 128
ND EA + + GS+ LGV +DID LCVG + FF Q L
Sbjct: 634 NDTTAAEAEKRSHVQLVLIPVGSFGLGVWTSLSDIDCLCVG---NISSKTFFSLAVQKLK 690
Query: 129 EMPE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNAD 184
+ + L V +++ + G+ DL Y + P+ L + +
Sbjct: 691 KASTSGIKILRRVMANTGTMLELEIHGIRFDLQYCAAAAIAQGYPDVLKRPASDPVFSLP 750
Query: 185 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 244
Q++ L R + R +P + +R ++ WA+ RG+YS G LGGI+ L+
Sbjct: 751 VQSIAKLKPARDLVYLRRSIPDMTKYRVAHLFIKAWAQSRGLYSAKFGLLGGIHITSLLV 810
Query: 245 RICQLYPN----AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 300
+C+ N A + +++ FF Y+ + W V V+DP + KY
Sbjct: 811 PVCKALANEPEAASTADILTSFFYHYSTFDWETGV-------------VFDPFYHRDLKY 857
Query: 301 HLM---PIITPAY--PCMNSSYNVSTSTLRIMMDEFQRGHEICEA--------------- 340
H P+ + P +N++ + S ST+ + E R +
Sbjct: 858 HRTFREPLCLLGWHGPSLNTASSASISTVNALASELTRAAALLSQDGMTWSKFLGLELSG 917
Query: 341 -----MEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQL 393
+EK AD F ++Y+ Y++I + R + GW+ESR +
Sbjct: 918 TPSSLIEKGAAD-----------FLDSYQTYIKISARYWGSSQQKGRKYLGWLESRFISI 966
Query: 394 TLKIERHTYNMLQCHPHPGDF---------SDKSKPLYCSYFMGLQRKQGV--------P 436
+ I R T ++ P F SD++ L Y +GL+ +
Sbjct: 967 LVDISRKTLGLVP-RIWPARFIDEDQTSGTSDENSELSACYLIGLKWVDSIADKSATSQA 1025
Query: 437 VGEGEQFDIRLTVKEFKQAV 456
EG +IR+ ++EF+ V
Sbjct: 1026 AAEG---NIRVILQEFESRV 1042
>gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
Length = 973
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 136/355 (38%), Gaps = 40/355 (11%)
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 142
+ + GS R+G GAD+D + P D ++ +P+ T + V A
Sbjct: 617 DGVVHVVGSRRMGCALAGADLDLVAALPGGV----DLADVRARVTAALPDGTRVRQVTGA 672
Query: 143 HVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA--DEQTVRSLNGCRVTDQI 200
VP ++ + + +DL+ V LD + ++ + A D+ +L+ D +
Sbjct: 673 RVPGLRLRTGDLDVDLVV------VATGTLDPGE-AVARRAELDQAAAIALSAVSDADAV 725
Query: 201 LRLVPKIQNFRTTL-RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLV 259
V T L R ++ WA RG+ S G L G+ W++L AR + ++ L+
Sbjct: 726 RAAVGDHHTAFTRLARQVKAWAGARGLDSAPFGGLPGLAWSVLAARTAREATDSAAPDLL 785
Query: 260 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 319
FF + W W +PV L G P LM TP P N + V
Sbjct: 786 RHFFGTWAAWDWRDPVGLAPTGTG------------PHTPVVLM---TPTDPVRNCTGQV 830
Query: 320 STSTLRIMMDEFQRGHEICEAMEKNEADVD---WDTLFEPFTFFEAYKNYLRIDISAENA 376
++ DE R I E AD D W L P + + + + + A
Sbjct: 831 GAGFRDLLTDELYRAWTILE----TAADADTNPWPELLSPPSLHRRHAAWAVLTVRPGPA 886
Query: 377 DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQR 431
++ G V RLR L +E P P F ++ P + Y +GL R
Sbjct: 887 EEFEETSGRVRGRLRALLTALEDAGAADAYAWPRP--F--ETGPGFVRYAIGLGR 937
>gi|400596352|gb|EJP64126.1| endonuclease/Exonuclease/phosphatase protein [Beauveria bassiana
ARSEF 2860]
Length = 1233
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 146/367 (39%), Gaps = 46/367 (12%)
Query: 90 GSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVM 147
GSY LGV +D LC+G + FF Q L + + + L + ++
Sbjct: 662 GSYGLGVWTSSDHVDCLCIG---TMSSKTFFRMALQRLRKASDGGMRILRKASTSTGTML 718
Query: 148 KFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 205
K + G+ L Y + V P +++ D QT+ L R +LR +P
Sbjct: 719 KLQILGIKFTLHYCAATSIVEKYPRVMNLPSDHPEFALPVQTLAKLKPARDLYYLLRSIP 778
Query: 206 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS----- 260
+ FR ++ WA RG+Y G L GI+ +L+ IC+ A SM VS
Sbjct: 779 DLAKFRVAFLFIKAWASSRGIYGARFGLLSGIHITVLLVPICKQL--AAISMAVSTTDIL 836
Query: 261 -RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 319
FF Y W V+L L R ++ + L+ PA +N++
Sbjct: 837 TTFFSHYADLEWETHVVLDPFYHRELRYH-----RTSREPFCLLGWHAPA---LNTAMAA 888
Query: 320 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT--------FFEAYKNYLRID- 370
ST T++ + E + + + ++ W T+ P + F + +K+Y++ID
Sbjct: 889 STPTVKSIAAELSKANSLL-----SQPGATWGTILGPASTAASGVRDFLQNFKSYVKIDA 943
Query: 371 -ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------SKPLY 422
+ R + W+ESR + + R ++L PG F D+ +
Sbjct: 944 RFWGPSPSSGRKFLSWLESRCVAVLADMTRKAPSLLP-RLWPGRFIDRPNTDTVTGSEYH 1002
Query: 423 CSYFMGL 429
C Y +GL
Sbjct: 1003 CFYLIGL 1009
>gi|46805331|dbj|BAD16850.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 82.4 bits (202), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 38/43 (88%)
Query: 214 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 256
LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYPNTSPA 44
>gi|358396858|gb|EHK46233.1| hypothetical protein TRIATDRAFT_89627 [Trichoderma atroviride IMI
206040]
Length = 1209
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 161/388 (41%), Gaps = 60/388 (15%)
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAH 143
+ GS+ LGV +DID LCVG +TR FF Q L + V L V
Sbjct: 647 LIPVGSFGLGVWTDLSDIDCLCVG-NISTRV--FFNLAVQKLRKASAEGVKILRRVMANT 703
Query: 144 VPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 201
+++ + G+ DL Y + P+ L + QT+ L R +
Sbjct: 704 GTMLELEIRGIKFDLQYCAAAAIAQGYPDVLKRPSSDPVFALPLQTLAKLKPARDLFYLR 763
Query: 202 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM---- 257
R +P + +R ++ WA+ RG+Y+ G LGGI+ + ++ IC+ N ++
Sbjct: 764 RSIPDMTKYRVAHLFIKAWAQSRGLYAAKYGMLGGIHISSMLVPICKALANESEAVSTAD 823
Query: 258 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY--PC 312
+++ FF+ Y+++ W E G V+DP + KYH P+ + P
Sbjct: 824 ILTTFFQHYSKFNW---------ETG----MVFDPFYHLGLKYHRTFREPLCLLGWHGPS 870
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF------EPFT-------- 358
+N++ S ST+ + E R + ++ DV W P T
Sbjct: 871 LNAASTASISTVNALTSELVRAAALF-----HQQDVTWSRFLGLEQSATPLTLIEKGAAD 925
Query: 359 FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS- 415
F +Y++Y++I + R + GW+ESR + + I R + +++ P F+
Sbjct: 926 FLNSYRSYIKISARYWGSSQQKGRKYLGWLESRCISILVDISRKSPSLIP-RMWPARFAD 984
Query: 416 --------DKSKPLYCSYFMGLQRKQGV 435
D++ L Y +GL+ + V
Sbjct: 985 EDPTNSTYDQTSELNACYLVGLKWDENV 1012
>gi|56785136|dbj|BAD81791.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 38/43 (88%)
Query: 214 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 256
LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 44
>gi|353236816|emb|CCA68803.1| related to poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 1198
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 141/332 (42%), Gaps = 30/332 (9%)
Query: 85 KIFTFGSYRLGVHGPGADIDTLCVG---PRH---ATREEDFFGELHQMLTEMPEVTELHP 138
K+ GSY LGVH +DID L VG P+ R Q T V
Sbjct: 611 KLEAVGSYALGVHTCESDIDCLAVGNISPQTFWLLARSRLLAQAKQQTGTGTTVVKLRRF 670
Query: 139 VPDAHVPVMKFKFSGVSIDLLYARLSLWV-----IPEDLDISQDSILQNADEQTVRSLNG 193
V DA V +M+ + G+ IDL Y V IPE I DS L ++ +L+
Sbjct: 671 VKDAAVQMMELEAHGIKIDLQYCVAPKLVERWSEIPE---IPVDSPLFALPASSLVTLSA 727
Query: 194 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 253
R + R++P + F R ++ + RRG+ G+LGG + LL+ R+ P++
Sbjct: 728 YRDVLILRRVIPSLSAFVKAHRALKLFLSRRGLVGARFGYLGGFHLTLLLTRVAITLPHS 787
Query: 254 V---PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD--PRRNPKDKYHLMPIITP 308
LV F R Y W W + ++G + +R P M +++
Sbjct: 788 AGRSAPHLVEAFLREYAVWDWTQDTVHPIPAAAAVGTGAYKRVVQREP------MAVLSI 841
Query: 309 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 368
+ P N + N S +++ + Q + ++ DV + +F + Y+++++
Sbjct: 842 SKPQKNIASNASWNSVASLSHGLQTANATLQS-GGTWLDVCGTNPLK--SFIDEYRSFVK 898
Query: 369 IDISAENADDL--RNWKGWVESRLRQLTLKIE 398
I++ D + R GW+ES++ L +++
Sbjct: 899 IEVHYWGGDCMQGRALMGWLESKIVSLLVQLH 930
>gi|384498736|gb|EIE89227.1| hypothetical protein RO3G_13938 [Rhizopus delemar RA 99-880]
Length = 281
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 125/266 (46%), Gaps = 27/266 (10%)
Query: 77 QLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTEL 136
Q Q+ + FGS+ LG + ++ V P R DFF ++L E +
Sbjct: 31 QTRQDIECILSPFGSFGLGGYIKNDVVELALVCPYQIHRS-DFFKFFPELLKEQSLI--- 86
Query: 137 HPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 196
+ + +++ + RL L + ++ +S+LQ+ D+ ++ +++G R+
Sbjct: 87 ---------------NNIEVNISFIRLKLERVTHRINFLDNSLLQDMDDASLATMDGPRL 131
Query: 197 TDQILRLVPKIQN---FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR---ICQLY 250
+Q + K N F+ +L+C+++WA +RG+Y+ G+L LL+ + Q
Sbjct: 132 -NQFNKSQIKPSNVRLFQVSLQCIKYWAIQRGLYNAEIGYLNETACTLLLIKTFMFIQSK 190
Query: 251 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 310
++++ FF+++++W W PV+L G ++ K +MPII+P Y
Sbjct: 191 EKLSITIILQNFFQMWSKWPWKTPVILTNHIPDKNGNKLEYSSITGSQK-AMMPIISPCY 249
Query: 311 PCMNSSYNVSTSTLRIMMDEFQRGHE 336
P + + V+ T + + EF+RG+
Sbjct: 250 PVYSVTPYVTKLTQKTIQLEFERGNH 275
>gi|226295206|gb|EEH50626.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1228
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 166/403 (41%), Gaps = 44/403 (10%)
Query: 21 TDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQ 80
T D L+ L D +++ S E+A R+ L + I + + ++
Sbjct: 619 THPDFHDPADLKLCLADRSIFPSPEDAEKRKAAFKYLKHL--ILHGSLPESGETHETGRS 676
Query: 81 EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHP 138
+ + GSY LGV +D+D LCVGP +T FF Q L + + V L
Sbjct: 677 NFSFIVTAVGSYGLGVWTNSSDVDCLCVGPVSSTT---FFELAMQRLRKGADSGVKILRK 733
Query: 139 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ----DSILQNADEQTVRSLNGC 194
V A + + + +GV DL Y V L++S D + A V+ L
Sbjct: 734 VKAATGTMWELEVNGVKFDLQYCPAGA-VAERWLEVSHLPRADPLFDLAYLSLVK-LQPY 791
Query: 195 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 254
R + R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P
Sbjct: 792 RDQTYLQRTIKNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNT 851
Query: 255 PSM--LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 312
S+ ++ FF Y + W ++ + PR N + M I+T YP
Sbjct: 852 TSVADILRTFFNHYADFYWMEGMVY------DMNFHRKQPRYN-RSPRECMVILTLHYPI 904
Query: 313 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 372
MN + S S++R ++DE R DTL + + Y + ++
Sbjct: 905 MNVARTASISSMRTIVDEMNRA----------------DTLISEGRYIKINVQYWGLSLA 948
Query: 373 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
++ GW+ESR L I R + LQ P F+
Sbjct: 949 KGSS-----LIGWLESRCLLLLADIHRKLPD-LQTRIWPARFT 985
>gi|162448422|ref|YP_001610789.1| polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
gi|161159004|emb|CAN90309.1| Polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
Length = 961
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 137/362 (37%), Gaps = 42/362 (11%)
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 142
+ GS RLG PGAD+D + P D Q+ + +PE + + V
Sbjct: 588 GGALHVTGSRRLGCALPGADLDLVAALPGPI----DLDAVEVQVRSALPEASTVRRVEAI 643
Query: 143 HVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 202
VP ++ G+ DL V PE + + E +L+ D +L
Sbjct: 644 RVPCLELCAVGLDADLTLVDAGA-VRPEHAVARRLEL----GEAAAMALSAVTDADALLE 698
Query: 203 LV----------PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 252
V + + F R ++ WA+ +G+ + G L GI W +L AR+ P+
Sbjct: 699 AVDAASAPSAAPRRREAFLALGRAVKAWARAKGIDAAPFGGLPGIAWLVLAARVVCDAPD 758
Query: 253 AVPSMLVSRFFRVYTQWRWPNPVLL--CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 310
P L+SRFF + W + P+ L A G+ G DP R I TP
Sbjct: 759 LEPGPLLSRFFGAWAAWDFRRPIALDPSAPAVGTPG----DPVR----------IATPTA 804
Query: 311 PCMNSSYNVSTSTLRIMMDEFQRGHEICE-AMEKNEADVDWDTLFEPFTFFEAYKNYLRI 369
P + S V + L + DE E E A+ + L P + + I
Sbjct: 805 PVRSCSDTVGAAALATLSDELYSAWEAVESALAAGRDPL--PDLLAPPPLHRRHAAWAVI 862
Query: 370 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 429
+ A + + + GWV R+R L ER L+ PH D P + +GL
Sbjct: 863 TVEAPEPEGVASGLGWVRGRIRALLSSFERAGVGDLRAWPHAFD----RGPRLARHAIGL 918
Query: 430 QR 431
+
Sbjct: 919 GK 920
>gi|325090905|gb|EGC44215.1| DUF455 domain-containing protein [Ajellomyces capsulatus H88]
Length = 1256
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 150/353 (42%), Gaps = 41/353 (11%)
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAH 143
+ T GS LGV +DID LCVG A FF + Q L + V + V A
Sbjct: 683 VTTVGSSGLGVWTESSDIDCLCVGSISANV---FFELIIQRLRNRIDLGVKIIRRVKPAF 739
Query: 144 VPVMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 199
+++ + +G+ DL Y A W+ E ++ Q S L N L R
Sbjct: 740 GTMLELEVNGIKFDLQYCPAAAVAERWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQAY 797
Query: 200 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM-- 257
+ R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S
Sbjct: 798 LQRTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSAAD 857
Query: 258 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 317
++ FF Y + W + I P RN + M I T P +N +
Sbjct: 858 ILCTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVAR 910
Query: 318 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------------TFFEAYK 364
+ S ++R ++DE +R + +E + +W L + F ++Y
Sbjct: 911 STSIPSMRKIVDEMKRAENLI-----SEGNANWAELLGIYPKTGKSALSSSADEFLKSYN 965
Query: 365 NYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
+Y++I++ + + + GWVESR L + R + +Q P F+
Sbjct: 966 SYIKINVQYWSLSLAKGSSLVGWVESRCLDLLDDLYRE-FPDIQARIWPARFT 1017
>gi|240274573|gb|EER38089.1| DUF455 domain-containing protein [Ajellomyces capsulatus H143]
Length = 1256
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 150/353 (42%), Gaps = 41/353 (11%)
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAH 143
+ T GS LGV +DID LCVG A FF + Q L + V + V A
Sbjct: 683 VTTVGSSGLGVWTESSDIDCLCVGSISANV---FFELIIQRLRNRIDLGVKIIRRVKPAF 739
Query: 144 VPVMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 199
+++ + +G+ DL Y A W+ E ++ Q S L N L R
Sbjct: 740 GTMLELEVNGIKFDLQYCPAAAVAERWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQAY 797
Query: 200 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM-- 257
+ R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S
Sbjct: 798 LQRTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSAAD 857
Query: 258 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 317
++ FF Y + W + I P RN + M I T P +N +
Sbjct: 858 ILCTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVAR 910
Query: 318 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------------TFFEAYK 364
+ S ++R ++DE +R + +E + +W L + F ++Y
Sbjct: 911 STSIPSMRKIVDEMKRAENLI-----SEGNANWAELLGIYPKTGKSALSSSADEFLKSYN 965
Query: 365 NYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 415
+Y++I++ + + + GWVESR L + R + +Q P F+
Sbjct: 966 SYIKINVQYWSLSLAKGSSLVGWVESRCLDLLDDLYRE-FPDIQARIWPARFT 1017
>gi|218200294|gb|EEC82721.1| hypothetical protein OsI_27409 [Oryza sativa Indica Group]
Length = 293
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 302 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 361
MPI+ P P + N++ T + + +E RG+ + + E D +W LF PF +
Sbjct: 92 FMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTK--EPWRHDFEWVWLFAPFPYAT 149
Query: 362 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 398
Y+ +LRI + A +++LR+W GWV+SR R L LK+E
Sbjct: 150 KYEEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLE 186
>gi|320590446|gb|EFX02889.1| duf455 domain containing protein [Grosmannia clavigera kw1407]
Length = 498
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 99/237 (41%), Gaps = 50/237 (21%)
Query: 212 TTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP-----------NAVPSMLVS 260
T R ++ WA+ RG+Y+ G+LGGI A+L+AR+ +L +AVP +L +
Sbjct: 52 TAYRSIKTWARSRGLYAARFGYLGGIQIAVLLARVMKLMAAATDDDDDDDSSAVPDILAT 111
Query: 261 RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY--PCMNSSYN 318
FFR Y + W + G + P + P++ Y P +N+S +
Sbjct: 112 -FFRDYAGFDWATQMAFDPFFHG---------HKAPHVRTAGEPLVILGYHRPQLNTSMS 161
Query: 319 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE-------------------PFTF 359
S S++R++ E +R + A + WD TF
Sbjct: 162 ASVSSVRVLAAELRRADRLLSA-----GRISWDAFLGGGGDEGDSSTIVAGRLLSGAATF 216
Query: 360 FEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 414
AY+ Y++ID+ R ++ GW+ESR L + + R L H PG F
Sbjct: 217 VCAYRTYVKIDLQYWGLSLQRGASFVGWLESRCAMLLVDVARRL-PQLNTHIWPGRF 272
>gi|403334159|gb|EJY66233.1| Poly(A) polymerase PAPalpha [Oxytricha trifallax]
Length = 665
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 155/416 (37%), Gaps = 118/416 (28%)
Query: 89 FGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTEL--HPVPDAHVPV 146
FGS G +DID L + EDFF + L PEV + +P A +P+
Sbjct: 119 FGSGMFGGFDKHSDIDVLLSSFKFLLSREDFFSKFSAYLKS-PEVGAIIHQEIPQAQIPI 177
Query: 147 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT-------------VRSLNG 193
+KF+F D+LY + + P ISQ Q +Q V S G
Sbjct: 178 IKFEFMSKQFDVLYCSM---LTP----ISQHQRCQLEKDQYFFEFSNVVQEKVDVFSFRG 230
Query: 194 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL---- 249
+ + + F L+ ++ WAK++G+Y G+L GI+ +++ ++ ++
Sbjct: 231 WSNCQYMYERIKDKEAFGWGLKIIKAWAKKKGLYGFNFGYLNGISLIIMLGKVDKMIRRE 290
Query: 250 ----------------------YPNAV----------PSMLVSRFFRVYTQWRWPNPVLL 277
PN LV++FF VY++W P+
Sbjct: 291 RFQSDYCDDTLSRNVNNQLSFTIPNRTLKSNNKIEDRVCELVTKFFEVYSKWDSKQPIFF 350
Query: 278 CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 337
S+ ++ + PI+TP P +++ ++TS+L +M++ Q +
Sbjct: 351 QDNNSWSMDQDLYSVCLK-----EVFPIVTPERPYKCTTHQINTSSLNHIMEQLQTAQNL 405
Query: 338 CEAMEKNEADVD---------------------------------WDTLFEPFTFFEAYK 364
C ++K + +D W LF P+ FF +
Sbjct: 406 CILIQKRQLILDLVKYQNDNAFDKFGNPKKDNYNLSILKEFGQVTWKDLFNPYQFFTQHT 465
Query: 365 NYLRID------ISAENADDL---------------RNWKGWVESRLRQLTLKIER 399
+L+I+ IS N D++ +KG ESR + L L +E+
Sbjct: 466 IFLQIEVMTDVNISQYNYDNVPDDPIGQYEVVLKHHHEYKGLFESRFKLLQLMMEQ 521
>gi|351701159|gb|EHB04078.1| Poly(A) polymerase alpha [Heterocephalus glaber]
Length = 298
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 17 LAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLND 76
L+ P + + + T+KL + L+ ++E +EE R +LG+L+ +VK W+++IS +K L
Sbjct: 73 LSTPKETNWVLTQKLNETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQ 132
Query: 77 QLLQEANAKIFTFGSYRLGVH 97
+++ K+FTFGSYRLGVH
Sbjct: 133 SVIENVGGKMFTFGSYRLGVH 153
>gi|456389475|gb|EMF54915.1| hypothetical protein SBD_4583 [Streptomyces bottropensis ATCC
25435]
Length = 930
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 129/348 (37%), Gaps = 51/348 (14%)
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 145
+ GS R+G PGAD+D + P A EL + E+ E ++ V A VP
Sbjct: 592 VHVVGSRRMGCALPGADLDLVAALPGTA--------ELTSVQRELREAVDVREVVGARVP 643
Query: 146 VMKFKFSGVSIDL-LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 204
++ + GV++DL + A SL P + + + + A + V +
Sbjct: 644 GLRLRLDGVNVDLAVVATGSL--DPVEAVARRTELGEAAAVALSAVSDAEAVLASVGGHE 701
Query: 205 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 264
P F R ++ WA+ RG+ S G L G+ W++L AR + P L+ FF
Sbjct: 702 PA---FAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTVSEAGDLPPDGLLRHFFA 758
Query: 265 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 324
+ W W PV G L L I+TP+ P + V+T
Sbjct: 759 TWAAWDWREPVGGPGGTSGRLPLT----------------IVTPSAPVRPCTDQVTTGMR 802
Query: 325 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS---AENADDLRN 381
++ E R E+ E W L P + + + + A AD+ R
Sbjct: 803 DLITQELFRAWELLEEGSS------WADLLTPPPLHRRHAAWAIVTVGGGPAGVADEGR- 855
Query: 382 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 429
V R+R L + CH P F+ Y +GL
Sbjct: 856 ----VRGRMRALVTDLAEVAPG---CHAWPRPFTTAP----ARYAIGL 892
>gi|297192707|ref|ZP_06910105.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297151463|gb|EFH31180.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 359
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 30/260 (11%)
Query: 82 ANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 141
A+ + GS R+G PGAD+D + P + G ++ +PE T + V
Sbjct: 23 ADGCVHLVGSRRMGCELPGADLDLVAALPG----SPELAGVRARLTAALPEATGVREVVG 78
Query: 142 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 201
A VP ++ G+++DL+ V P + + + ++A +L+ D +L
Sbjct: 79 ARVPGLRMSVGGLAVDLVVVATGA-VDPAEAVGRRTELGEDA----AIALSAVSDADALL 133
Query: 202 -RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS-MLV 259
++ + + F R ++ WAK RG+ S G L G+ W++L AR + A+PS L+
Sbjct: 134 DQVADRREAFTDLARRVKAWAKARGLDSAPFGGLPGLAWSVLAARTVR-EAGALPSDELL 192
Query: 260 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 319
FF + W W PV P M ++TP P S V
Sbjct: 193 RHFFATWAAWDWREPV------------------GGPARPDLPMTVMTPTAPVRPCSDQV 234
Query: 320 STSTLRIMMDEFQRGHEICE 339
+ ++ E R E+ +
Sbjct: 235 TEGMRDLITQELFRAWEVLD 254
>gi|62088188|dbj|BAD92541.1| poly(A) polymerase gamma variant [Homo sapiens]
Length = 382
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 326 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 385
+M++EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60
Query: 386 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 441
VES++R L +ER+ + + +P PG+ Y S +F+G+ ++ V E
Sbjct: 61 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESV 119
Query: 442 QFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFV 482
D+ ++ F +QA ++ L++ GM+I HV ++ L +++
Sbjct: 120 NIDLTYDIQSFTDTVYRQANNINMLKE-GMKIEATHVKKKQLHHYL 164
>gi|433605790|ref|YP_007038159.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
gi|407883643|emb|CCH31286.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
Length = 892
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 118/334 (35%), Gaps = 58/334 (17%)
Query: 78 LLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH 137
+L A ++ GS R G P D+D + V D E ++ +P + L
Sbjct: 565 VLAAALGEVHVVGSRRTGCALPDGDLDLITV-----ASAADAVAE--RVRVALPAASALR 617
Query: 138 PVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 197
PV A P + G+ +DL A + + + D + V + G RV
Sbjct: 618 PVVGARSPGWRLDVGGLGVDLTVA----------VAGNPAAWSSLGDAEAVLAAVGDRV- 666
Query: 198 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 257
FR R ++ WA+ RG+ S G + G+ WA+L AR +
Sbjct: 667 ----------DRFRRLAREVKGWARARGLDSAPFGGVPGVGWAVLAARTVLDAGDGFDGG 716
Query: 258 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 317
++ FF + W W +P+ L A+ P+ + I+TPA P + +
Sbjct: 717 GLAEFFGTWAAWDWRDPIGLGAV---------------PERTGAPVTIMTPAAPVRSCTE 761
Query: 318 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENAD 377
V ++ E R E+ EA + L P + + + + +
Sbjct: 762 QVGPGFRDLLTAELYRAWEVVEAGGTD--------LATPPDLHRVHAAWAVVTVPHDRVG 813
Query: 378 DLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 411
+R RLR L +E P P
Sbjct: 814 PVRG-------RLRALLTALETAGVADADAWPRP 840
>gi|302532764|ref|ZP_07285106.1| polynucleotide adenyltransferase [Streptomyces sp. C]
gi|302441659|gb|EFL13475.1| polynucleotide adenyltransferase [Streptomyces sp. C]
Length = 430
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 29/262 (11%)
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 145
+ T GS R+G PGAD+D + V P A D G ++ +P L V A VP
Sbjct: 78 VRTVGSRRMGCALPGADLDLVAVLPGPA----DAAGVRARVAAALPGARRLREVTGARVP 133
Query: 146 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 205
++ G+ +DL+ + + L +++ + L A + +L+ + +
Sbjct: 134 GLRLHAYGLDVDLVL--VGAGALDPGLAVARRAELGEAAAVALSALDDADAVRESVGA-- 189
Query: 206 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV-------PSML 258
F + R + WA+ RG+ S G L G+ WA+L AR + AV P+ L
Sbjct: 190 SHAAFASLAREAKAWARARGLDSAPFGGLPGLAWAVLAARTVR---EAVRDAADLSPAGL 246
Query: 259 VSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYN 318
FF + W W PV L + R+P + ++TP P + +
Sbjct: 247 RREFFGTWAAWDWSEPVSLLPADGAG---------RSPSPDP--VTVLTPRAPVRSCTAQ 295
Query: 319 VSTSTLRIMMDEFQRGHEICEA 340
V +++ E R E+ EA
Sbjct: 296 VGPGMRDLLVRELYRAWEVLEA 317
>gi|254385996|ref|ZP_05001313.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
gi|194344858|gb|EDX25824.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
Length = 649
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 143/372 (38%), Gaps = 62/372 (16%)
Query: 71 AKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 130
A+ L+D ++ A GS R+G PGAD+D + P E ++ +
Sbjct: 289 ARALDDGVVHLA-------GSRRMGCARPGADLDLVAALPGAVGGAE----VRERIAAAL 337
Query: 131 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD--EQTV 188
PE L V A VP ++F+ +G+ +DL+ V LD + ++ + A+ E
Sbjct: 338 PEAERLREVRGARVPGLRFRVAGLDVDLVV------VATGGLDPA-GALARRAELGEAAA 390
Query: 189 RSLNGCRVTDQILRLV-PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 247
+L+ D + V + F R ++ WA+ RG+ S G L GI WA+L AR
Sbjct: 391 VALSAVSDADAVRESVGAEHAAFARLAREVKAWARARGLDSAPFGGLPGIAWAVLAARTV 450
Query: 248 Q----LYPNAVPS------MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 297
+ L P+ + L+ FF + W W +PV L P P
Sbjct: 451 REAAALSPDGLSPDGLSLDGLLREFFGAWAAWDWCDPVALH------------HPPPAPG 498
Query: 298 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 357
+ + ++TP+ P + + V LR ++ G E+ EA E +A P
Sbjct: 499 SEGAVT-VLTPSEPVRSCTAQVGPG-LRDLL-----GRELYEAWESPQAG--------PP 543
Query: 358 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 417
+ + + + + G RLR L +E P P + D
Sbjct: 544 APHRRHAAWAVVTVRGATPQEFEESLGRTRGRLRALLGALEEGGVAEAHAWPRPFERGDT 603
Query: 418 SKPLYCSYFMGL 429
Y +GL
Sbjct: 604 ----VARYAIGL 611
>gi|328847777|gb|EGF97110.1| hypothetical protein MELLADRAFT_87937 [Melampsora larici-populina
98AG31]
Length = 105
Score = 67.0 bits (162), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 53/84 (63%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKIS 69
G+T PIS+ GPT + T L L+ +ES E+A +RE VLGRL+ +VK +V K+S
Sbjct: 15 GVTGPISINGPTCPEGFSTTVLMDELKARCTFESPEDARAREFVLGRLNLLVKEFVIKVS 74
Query: 70 RAKGLNDQLLQEANAKIFTFGSYR 93
A G++D + +E IFTFG ++
Sbjct: 75 PALGMSDHVARETGGNIFTFGQFK 98
>gi|322692951|gb|EFY84832.1| Poly(A) polymerase type 3 [Metarhizium acridum CQMa 102]
Length = 274
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 217 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLY----PNAVPSMLVSRFFRVYTQWRWP 272
++ WAK RG+YS+ G LG +N ++++ IC+L P+A + +++ FF Y + W
Sbjct: 11 LKAWAKSRGLYSSKLGLLGSLNISVMLVPICKLLAYDGPSAGTTDILTTFFHHYRNFDWK 70
Query: 273 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPAYPCMNSSYNVSTSTLRIM 327
++L DP + KYH M ++ P N++ N + ST+ I+
Sbjct: 71 TNMVL-------------DPLFHGTVKYHRTQRESMCLLGWHTPSRNTALNATASTIHIL 117
Query: 328 MDEFQRGHEICEAMEKNEADVDWDTLFE------PFT---------FFEAYKNYLRIDIS 372
E R ++ ++ V+WDT PF F +++K Y++++ S
Sbjct: 118 SAEIMRASDLL-----SQEGVNWDTFLRGTQSLLPFPELTACNAAGFLDSHKCYIKMNAS 172
Query: 373 AENADDLRN--WKGWVESRLRQLTLKIE 398
+ + GW+ESR + + ++
Sbjct: 173 YLGCSPRKGKRFVGWLESRCLMVLVDLQ 200
>gi|290958156|ref|YP_003489338.1| hypothetical protein SCAB_36991 [Streptomyces scabiei 87.22]
gi|260647682|emb|CBG70787.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 925
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 136/346 (39%), Gaps = 48/346 (13%)
Query: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 145
+ GS R+G PGAD+D + P EL + E+ +E+ V A VP
Sbjct: 588 VHVAGSRRMGCALPGADLDLVAALPGTV--------ELGSLRRELGGASEVREVVGARVP 639
Query: 146 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 205
++ +F G+ +DL V+ +++ + A+ +L V+D L
Sbjct: 640 GLRLRFDGLDVDLA-------VVATGAMDPGEAVDRRAELGEAAALALSAVSDAEAVLAS 692
Query: 206 ---KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 262
+ F R ++ WA+ RG+ S G L G+ W++L AR + PS L+ F
Sbjct: 693 VGGRGPAFAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPSCLLRHF 752
Query: 263 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 322
F + W W PV +E G + + TP+ P + + V T+
Sbjct: 753 FATWAAWDWREPV--GGLEGAPAG---------------PLTVATPSAPVRSCTDQV-TA 794
Query: 323 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 382
+R ++ + E+ A E E W + P + + + A D + +
Sbjct: 795 DMRDLITQ-----ELFRAWELLEEGASWTEVLAPPPLHRRHAAWAVVTAGA-GTDGVVD- 847
Query: 383 KGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMG 428
+G V R+R L + CH P F+ + P+ + +G
Sbjct: 848 EGRVRGRMRALITDLAGLAPG---CHAWPRPFA--TAPVRYAIGLG 888
>gi|429200719|ref|ZP_19192393.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
gi|428663602|gb|EKX62951.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
Length = 985
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 127/352 (36%), Gaps = 47/352 (13%)
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 142
+ + GS R+G PGAD+D + P + ++ +PE ++ V A
Sbjct: 638 DGVVHVVGSRRMGCALPGADLDLVAALPGTV----ELAAVQAELSKALPEAADVREVVGA 693
Query: 143 HVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ--DSILQNADEQTVRSLNGCRVTDQI 200
VP ++ + + +DL+ V +D ++ D ++ + V +
Sbjct: 694 RVPGLRLRLDRLDVDLVV------VATGSMDPAEAVDRRVELGEAAAVALSAVSDADAVL 747
Query: 201 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS 260
F R ++ WA+ RG+ S G L G+ W++L AR + P L+
Sbjct: 748 ASAGAHGPAFARLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPYDLLR 807
Query: 261 RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP--IITPAYPCMNSSYN 318
FF + W W PV P + H +P I TP+ P +
Sbjct: 808 HFFATWAAWDWRTPV-------------------GPAGQSHALPLTITTPSAPIRPCTDQ 848
Query: 319 VSTSTLRIMMDEFQRGHEICEAMEKNE-ADVDWDTLFEPFTFFEAYKNYLRIDISAENAD 377
V+ ++ E R E+ E + A W L P + + + + AD
Sbjct: 849 VTAGMRDLVTQELFRAWEVLEGAPTDPTARYPWAELLAPPPLHRRHAAWAVV-TAGPGAD 907
Query: 378 DLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 429
+ R + R R L + T + CH P F+ Y +GL
Sbjct: 908 EGR-----LRGRTRSLITDLAETTPD---CHAWPRPFTTTP----TRYAIGL 947
>gi|344249366|gb|EGW05470.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 63
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 303 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 362
MPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQK 58
Query: 363 YK 364
YK
Sbjct: 59 YK 60
>gi|341888961|gb|EGT44896.1| hypothetical protein CAEBREN_24044 [Caenorhabditis brenneri]
Length = 224
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 40/197 (20%)
Query: 35 LRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI--SR-AKGLNDQLLQEANAKIFTFGS 91
L++ +E E+ R V+ +L I W+K I SR +KG N + K FG
Sbjct: 4 LKEFKSFEPIEDTEKRVTVIKKLTDIGNTWIKMIIASRVSKGSN----VKTEGKCVAFGF 59
Query: 92 YRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKF 151
Y LGVH G DID++ + P ++ +L+ +A V +M +
Sbjct: 60 YWLGVHSSGGDIDSVLIAPSS-------------------KIKKLNAAGNAFVLLMTMEC 100
Query: 152 SGVSIDLLYARLSLWVIPEDLDISQDS------------ILQNADEQTVRSLNGCRVTD- 198
GV +DLL A + L IP +LD++ DS +L+ + G TD
Sbjct: 101 DGVEVDLLIACMDLATIPANLDLTSDSPSDQESLLMYPKVLKFTSKTQSVLFIGLEFTDV 160
Query: 199 -QILRLVPKIQNFRTTL 214
+ L L +I+NF+ T+
Sbjct: 161 NKNLDLTTEIENFKKTV 177
>gi|413933520|gb|AFW68071.1| hypothetical protein ZEAMMB73_464170 [Zea mays]
Length = 546
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFG 90
L K+L+D + S E+ RE+V+ L +IV W ++ + + L A A + T+
Sbjct: 212 LSKFLKDEGVVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQGL---ATATVLTYD 268
Query: 91 SYRLGVHGPGADIDTLCVGPRHATREEDFF 120
SY LG HGP ++ID LC+GP AT + FF
Sbjct: 269 SYTLGAHGPESNIDLLCLGPCIATLQYHFF 298
>gi|413933521|gb|AFW68072.1| hypothetical protein ZEAMMB73_464170 [Zea mays]
Length = 763
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFG 90
L K+L+D + S E+ RE+V+ L +IV W ++ + + L A A + T+
Sbjct: 212 LSKFLKDEGVVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQGL---ATATVLTYD 268
Query: 91 SYRLGVHGPGADIDTLCVGPRHATREEDFF 120
SY LG HGP ++ID LC+GP AT + FF
Sbjct: 269 SYTLGAHGPESNIDLLCLGPCIATLQYHFF 298
>gi|171688608|ref|XP_001909244.1| hypothetical protein [Podospora anserina S mat+]
gi|170944266|emb|CAP70376.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFG 90
++ L ++N+ +EEA R E L ++ K A L ++ + G
Sbjct: 357 IKACLSELNVTPGEEEAAQRREAFELLKTLLLDATTKTPAAARLQSFVV------VVPVG 410
Query: 91 SYRLGVHGPGADIDTLCVGPRHA-TREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 149
SY LGV +DID C+GP + T L + T+ V L V +++
Sbjct: 411 SYALGVWTTSSDIDVCCIGPFSSNTLFSVASSSLRKAATQ--GVRNLRRVKANTGTMLEL 468
Query: 150 KFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 205
+ GV +DL Y + W P L + + + QT+ L R D + R +P
Sbjct: 469 EVQGVRMDLQYCPAASVAQQW--PNVLRLPAKDPVWSLAPQTLNKLKAIRDIDYLRRSLP 526
Query: 206 KIQNFRTTLRCMRFWAKRRGVYS 228
I++FR R ++ WA+ RGVYS
Sbjct: 527 DIESFRLAHRFIKTWARSRGVYS 549
>gi|297726257|ref|NP_001175492.1| Os08g0278750 [Oryza sativa Japonica Group]
gi|255678316|dbj|BAH94220.1| Os08g0278750, partial [Oryza sativa Japonica Group]
Length = 103
Score = 59.3 bits (142), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 33/40 (82%), Gaps = 2/40 (5%)
Query: 251 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQ 288
P +PSML+ RFFRV+ +W+WP+PV+LCAIE +G LGL+
Sbjct: 34 PQRLPSMLLPRFFRVFARWKWPSPVMLCAIEHDDGELGLK 73
>gi|349804279|gb|AEQ17612.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 153
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 123 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDI 174
++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+
Sbjct: 2 FYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDL 53
>gi|224141617|ref|XP_002324163.1| predicted protein [Populus trichocarpa]
gi|222865597|gb|EEF02728.1| predicted protein [Populus trichocarpa]
Length = 95
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 396 KIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGV 435
+IER T MLQCHP+P ++ D SK +C++FMGLQRK+GV
Sbjct: 5 QIERDTNGMLQCHPYPNEYIDASKQCPHCAFFMGLQRKEGV 45
>gi|402577076|gb|EJW71033.1| hypothetical protein WUBG_18059 [Wuchereria bancrofti]
Length = 94
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
Query: 2 GSSNGQ-------RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL 54
G+SNG+ LG+++PIS++GP + D++ + KL++YL+ +E++EE R +VL
Sbjct: 14 GNSNGKDNRLTTTYLGVSQPISISGPDEFDIVMSTKLDEYLQANGYFETEEEMNLRLKVL 73
Query: 55 GRLDQIVKIWVKKISRAK 72
+++ VK WV+ +S+ +
Sbjct: 74 SKINAYVKKWVRIVSKRR 91
>gi|294939632|ref|XP_002782536.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239894204|gb|EER14331.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 157
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 347 DVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 406
+V W L PF FF+ Y+ +L ++ISAE +KG VESR+R L +E + +
Sbjct: 17 EVTWADLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVL 76
Query: 407 CHPHPGDF 414
PHP F
Sbjct: 77 PQPHPVMF 84
>gi|255710469|ref|XP_002551518.1| KLTH0A01276p [Lachancea thermotolerans]
gi|238932895|emb|CAR21076.1| KLTH0A01276p [Lachancea thermotolerans CBS 6340]
Length = 609
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 90/233 (38%), Gaps = 41/233 (17%)
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 142
+A + FGS+ ++ PG+DID + + L L T++ + A
Sbjct: 207 DADLHVFGSFATDLYLPGSDIDCVINSSSGDKENRNCLYSLASFLKRRKLATQVEVISKA 266
Query: 143 HVPVMKF--KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 200
VP++KF S + ID+ + R V L RV
Sbjct: 267 RVPIIKFVEPISQIHIDISFER-------------------------VNGLEAARVIRGW 301
Query: 201 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS---- 256
L+ P ++ L +F A RR + G LGG + LV QL+P + S
Sbjct: 302 LKETPGLREL--VLIVKQFLAARRLNMVHTGG-LGGFSIICLVYAFLQLHPRVISSDIDS 358
Query: 257 -----MLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHL 302
+L+ FF +Y + + V + + G+ L +++ +NP+ + L
Sbjct: 359 MENLGILLIDFFELYGKNFGYDHVAISVTDSGARYLSKELYGSLQNPRTSFAL 411
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 171 DLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 218
DLDI+Q S +EQTV SLNGCRVTDQ L LVP I + + +R
Sbjct: 679 DLDIAQGSDTTECNEQTVDSLNGCRVTDQFLHLVPNISSLGYIMNGVR 726
>gi|119713752|gb|ABL97801.1| hypothetical protein ALOHA_HF1029C11.0028 [uncultured marine
bacterium HF10_29C11]
Length = 677
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 137/376 (36%), Gaps = 119/376 (31%)
Query: 57 LDQIVKIWVKKISRAKGLNDQLLQE-----------ANAKIFTFGSYRLGVHGPGADIDT 105
LD +K +KKI AK + + L NA + FGS + D+D
Sbjct: 16 LDGDLKKVIKKIGDAKAKSRESLTNHLTSLIFRRFGKNAMVEAFGSSVTNLSIGTGDLD- 74
Query: 106 LCVG-----PRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFK--FSGVSIDL 158
LC+ PR R+ G LH+ E + +P A +P++KFK SG+
Sbjct: 75 LCLSFKNKTPRKVLRK--ISGVLHEEGME-----NIQLIPKARIPIVKFKDPRSGL---- 123
Query: 159 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 218
D+DIS D+ L + ++S D++ RLV ++
Sbjct: 124 ------------DVDISLDNRLAIYNSHLLKSYAQ---EDRLRRLV----------HMVK 158
Query: 219 FWAKRRGVYSNVAGFLGGINWALLVARICQLY-----PN--------------------- 252
+WA RRG+ + G L W LL + QL PN
Sbjct: 159 YWASRRGINNAFDGSLSSYAWTLLTIQHAQLVQPALAPNRQENCPSKPLSFQGKTFDVGF 218
Query: 253 -----------AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG---SLGLQVWDPR----- 293
++ S+L+S F R T+W W + ++ +I G S + W+
Sbjct: 219 NDDDFKTENTQSLASLLISFFDRYATRWDWES--MVVSIRNGKAHSTKAKKWNHTGPLPL 276
Query: 294 -----RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG----------HEIC 338
+ H+MPI P + S V + DEF R H+IC
Sbjct: 277 EVVTGVDDGRMEHVMPIEDPFDHEHDLSRVVRAEGAMSIQDEFMRAITMLSEGKSWHDIC 336
Query: 339 EAMEKNEADVDWDTLF 354
E + E D + D LF
Sbjct: 337 EPV--FEIDEEPDDLF 350
>gi|116196384|ref|XP_001224004.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
gi|88180703|gb|EAQ88171.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
Length = 891
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 195 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ------ 248
R TD + R +P FR R ++ WAK RG+Y+ GFL GI ++L+AR+ +
Sbjct: 637 RDTDYLARSLPDPPTFRLAHRAIKTWAKSRGIYAARFGFLSGIQISILLARVHKLLTRTT 696
Query: 249 -----LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 303
P L++ FF Y + W + + + R P++ ++
Sbjct: 697 TTTPTRTTPPTPETLLTTFFTHYATFDWAHQLAF----DPFFHRHALPYTRTPREPLAVL 752
Query: 304 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT----- 358
PA N++ S + + + EF+R ++ + + W +
Sbjct: 753 GYFAPA---RNTALAASVPSTKTLAAEFRRAADV---LRGENGALGWAGFLGGGSGAKDD 806
Query: 359 FFEAYKNYLRIDI 371
F A+++Y+++D+
Sbjct: 807 FLAAHRSYVKLDV 819
>gi|125526971|gb|EAY75085.1| hypothetical protein OsI_02979 [Oryza sativa Indica Group]
Length = 127
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 78 LLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH 137
+ +A A + +FGSY LGVH G+DID L VGP + R DFFG L L E V EL
Sbjct: 1 MADQATALVLSFGSYHLGVHSRGSDIDVLVVGPSYVDR--DFFGALAATLAETAAVAELQ 58
Query: 138 P 138
P
Sbjct: 59 P 59
>gi|62733224|gb|AAX95341.1| hypothetical protein [Oryza sativa Japonica Group]
gi|77552690|gb|ABA95487.1| expressed protein [Oryza sativa Japonica Group]
Length = 347
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 218
TVRSLNG RV D+ILRLVP F TTLRC++
Sbjct: 158 TVRSLNGVRVADEILRLVPDAATFHTTLRCVK 189
>gi|46806537|dbj|BAD17650.1| unknown protein [Oryza sativa Japonica Group]
gi|125581350|gb|EAZ22281.1| hypothetical protein OsJ_05937 [Oryza sativa Japonica Group]
Length = 169
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 218
TVRSLNG RV D+ILRLVP F TTLRC++
Sbjct: 42 TVRSLNGVRVADKILRLVPDAAAFHTTLRCVK 73
>gi|410730487|ref|XP_003671423.2| hypothetical protein NDAI_0G04030 [Naumovozyma dairenensis CBS 421]
gi|401780241|emb|CCD26180.2| hypothetical protein NDAI_0G04030 [Naumovozyma dairenensis CBS 421]
Length = 582
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 91/237 (38%), Gaps = 59/237 (24%)
Query: 43 SQEEAVSREEVLGRL-DQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGA 101
S+EE R + +GR+ D + W ND A + FGSY ++ PG+
Sbjct: 183 SKEEIKERNDTIGRIRDAVNHFW----------ND-------ANLHVFGSYATDLYLPGS 225
Query: 102 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSIDLL 159
DID + + + L L + T++ + A VP++KF S + ID+
Sbjct: 226 DIDCVIISEKGDKDSRSSLYALANFLKKRGLATDIEVIAKARVPIIKFIDPRSKIHIDVS 285
Query: 160 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 219
+ R + L ++ + L P ++ TL +F
Sbjct: 286 FER-------------------------INGLEAAKLIREWLNDTPGLREI--TLIVKQF 318
Query: 220 WAKRRGVYSNV-AGFLGGINWALLVARICQLYPNAVPS---------MLVSRFFRVY 266
RR +NV G LGG + LV Q++P + + +L+ FF +Y
Sbjct: 319 LHARR--LNNVHTGGLGGFSIICLVFSFLQMHPRIISNEIDPMENLGVLLVEFFELY 373
>gi|297725915|ref|NP_001175321.1| Os07g0658500 [Oryza sativa Japonica Group]
gi|255678036|dbj|BAH94049.1| Os07g0658500 [Oryza sativa Japonica Group]
Length = 319
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 218
TVR+LNG RV D+ILRLVP F TTLRC++
Sbjct: 135 TVRNLNGVRVADEILRLVPDAAAFHTTLRCVK 166
>gi|125571299|gb|EAZ12814.1| hypothetical protein OsJ_02733 [Oryza sativa Japonica Group]
Length = 127
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 78 LLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
+ +A A + +FGSY LGVH G+DID L VGP + R DFFG
Sbjct: 1 MADQATALVLSFGSYHLGVHSRGSDIDVLVVGPSYVDR--DFFG 42
>gi|46805211|dbj|BAD17691.1| unknown protein [Oryza sativa Japonica Group]
Length = 285
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 218
TVRSLNG RV D+ILRLVP F TTLRC++
Sbjct: 32 TVRSLNGVRVADEILRLVPDAAAFHTTLRCVK 63
>gi|55296010|dbj|BAD68901.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55296026|dbj|BAD69437.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 207
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 78 LLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFG 121
+ +A A + +FGSY LGVH G+DID L VGP + R DFFG
Sbjct: 1 MADQATALVLSFGSYHLGVHSRGSDIDVLVVGPSYVDR--DFFG 42
>gi|344256545|gb|EGW12649.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 349
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 326 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 385
+M++E ++G I + + ++A+ W LFE FF+ YK+Y+ + SA
Sbjct: 2 VMVEELKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAHTEKQRLECVDL 59
Query: 386 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 440
VES++ L +E++ + L Q P P D DK + + +GL K+ E
Sbjct: 60 VESKICILVGSLEKNEFIKLAHVNPQSFPAPKDNPDKEE-FRTMWVIGLVFKK-TENSEN 117
Query: 441 EQFDIRLTVKEFKQAV-------SMYTLRKPGMQISVAHVTRRNL 478
D+ ++ F V M+ L M+I+ HV R+ L
Sbjct: 118 LSVDLTYDIQSFTDTVYSQAINSKMFEL---DMKIAAMHVKRKQL 159
>gi|47496915|dbj|BAD19964.1| hypothetical protein [Oryza sativa Japonica Group]
gi|47497725|dbj|BAD19790.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 266
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 218
D T RSLNG RV D+ILRLVP F TTLRC++
Sbjct: 59 DLATARSLNGVRVADEILRLVPDADVFHTTLRCVK 93
>gi|355709244|gb|AES03527.1| poly polymerase gamma [Mustela putorius furo]
Length = 92
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQIVKIWVKKI 68
GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +VK W+ +
Sbjct: 34 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 92
>gi|290988093|ref|XP_002676756.1| predicted protein [Naegleria gruberi]
gi|284090360|gb|EFC44012.1| predicted protein [Naegleria gruberi]
Length = 604
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 44/209 (21%)
Query: 42 ESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGA 101
+++EE + RE VL ++ ++ K + N +I FGSY G+ PG+
Sbjct: 265 QTKEEELVRERVLEKVMRLCKNV----------------DPNCRIQMFGSYPAGLMLPGS 308
Query: 102 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYA 161
D+D L V R + ++ F +L++ L + E E++ + +A+VP++KFK +S+
Sbjct: 309 DLD-LHVLSR-SLSQKVFLEKLNRELNKSTEFVEINFIRNANVPIIKFK-EAISL----- 360
Query: 162 RLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWA 221
+++D+S NAD + + I R K F+ ++++
Sbjct: 361 --------QEVDVS----CNNADTDS--------SVEFIRRSSEKYPAFKYLCYFLKYFL 400
Query: 222 KRRGVYSNVAGFLGGINWALLVARICQLY 250
K+R + + G L +L++ Q++
Sbjct: 401 KQRNLNMVLYGGLSSYGLSLMIVSHLQMH 429
>gi|410077415|ref|XP_003956289.1| hypothetical protein KAFR_0C01610 [Kazachstania africana CBS 2517]
gi|372462873|emb|CCF57154.1| hypothetical protein KAFR_0C01610 [Kazachstania africana CBS 2517]
Length = 537
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 74/195 (37%), Gaps = 39/195 (20%)
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 142
+A + FGSY ++ PG+DID + R ++ +L + LT T++ V A
Sbjct: 183 DADLHVFGSYSTDLYLPGSDIDCVVNSERGNKDSKNCLYQLAKFLTTKKLATDVEVVSKA 242
Query: 143 HVPVMKF--KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 200
VP++KF +G+ ID+ + R NG I
Sbjct: 243 RVPIIKFVEPHTGIHIDVSFER----------------------------TNGLEAAKLI 274
Query: 201 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS---- 256
+ R + ++ + R + + G LGG + LV ++P + +
Sbjct: 275 RSWLDSTAGLRELVLVIKQFLHARRLNNVHTGGLGGFSIICLVFTFLHMHPRIITNEIDP 334
Query: 257 -----MLVSRFFRVY 266
+L+ FF +Y
Sbjct: 335 IDNLGVLLIDFFELY 349
>gi|218186213|gb|EEC68640.1| hypothetical protein OsI_37050 [Oryza sativa Indica Group]
Length = 248
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 24/32 (75%)
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 218
TVRSLNG RV D+IL LVP F TTLRC++
Sbjct: 111 TVRSLNGVRVADEILWLVPDAAAFHTTLRCVK 142
>gi|343172004|gb|AEL98706.1| Nucleotidyltransferase family protein, partial [Silene latifolia]
Length = 501
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 95/240 (39%), Gaps = 59/240 (24%)
Query: 40 LYESQEEAVSREEVLGRLDQIVK-IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHG 98
L + EE SR + R+ ++K IW N ++ FGSYR G++
Sbjct: 134 LSPTPEEGRSRNSAIQRVSDVIKYIW-----------------PNCRVEVFGSYRTGLYL 176
Query: 99 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSI 156
P +DID + + + + L + L++ ++ + A VP++KF K + V
Sbjct: 177 PSSDIDVVILD-SNIKSPQIGLQALSRALSQKGIAKKIQVIGKARVPIIKFVEKVTDVQF 235
Query: 157 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 216
D+ + D+D NG + + I ++ ++ R
Sbjct: 236 DVSF----------DVD------------------NGPKAAEYIKDVISRLPPLRPLCLI 267
Query: 217 MRFWAKRRGVYSNVAGFLGGINWALLVARICQL--------YPNAVPSMLVSRFFRVYTQ 268
++ + ++R + +G +G ++ALL I L YP +L+ +FF Y
Sbjct: 268 LKVFLQQRELNEVYSGGIG--SYALLAMLIAMLKSVNEGQRYPEHNLGVLLVKFFEFYAH 325
>gi|344252871|gb|EGW08975.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 384
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 30/171 (17%)
Query: 326 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 385
+ ++EF++G I + + ++A W FE FF+ K+Y+ + SA W G
Sbjct: 2 VAVEEFKQGLAITDEILLSKAK--WSKFFEAPNFFQKCKHYIVLLASAPTEKQRLEWVGL 59
Query: 386 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 445
VES++R L +E++ + L H +P + +GL K+ E ++
Sbjct: 60 VESKIRILVGSLEKNEFITL-AHVNPE--------FRTIWVIGLVFKK---TENSENLNV 107
Query: 446 RLT--VKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 483
LT ++ F +QA++ M+ L M+ + HV R+ LP++V
Sbjct: 108 DLTYDIQSFMDTVYRQAINSKMFEL---DMKTAAMHVKRKQLHQLLPSYVL 155
>gi|343172002|gb|AEL98705.1| Nucleotidyltransferase family protein, partial [Silene latifolia]
Length = 501
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 95/240 (39%), Gaps = 59/240 (24%)
Query: 40 LYESQEEAVSREEVLGRLDQIVK-IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHG 98
L + EE SR + R+ ++K IW N ++ FGSYR G++
Sbjct: 134 LSPTPEEGRSRNSAIQRVSDVIKYIW-----------------PNCRVEVFGSYRTGLYL 176
Query: 99 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSI 156
P +DID + + + + L + L++ ++ + A VP++KF K + V
Sbjct: 177 PSSDIDVVILD-SNIKSPQIGLQALSRALSQKGIAKKIQVIGKARVPIIKFVEKVTDVQF 235
Query: 157 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 216
D+ + D+D NG + + I ++ ++ R
Sbjct: 236 DVSF----------DVD------------------NGPKAAEYIQDVISRLPPLRPLCLI 267
Query: 217 MRFWAKRRGVYSNVAGFLGGINWALLVARICQL--------YPNAVPSMLVSRFFRVYTQ 268
++ + ++R + +G +G ++ALL I L YP +L+ +FF Y
Sbjct: 268 LKVFLQQRELNEVYSGGIG--SYALLAMLIAMLKSVNEGQRYPEHNLGVLLVKFFEFYAH 325
>gi|256396175|ref|YP_003117739.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
44928]
gi|256362401|gb|ACU75898.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
44928]
Length = 1007
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 28/195 (14%)
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 142
A I GS R H P ADID + P D ++ + + + A
Sbjct: 680 EATIHLVGSRRTATHLPAADIDLVAAVPG----APDIGALERRVAKALGAGHRVRQLVAA 735
Query: 143 HVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD--EQTVRSLNGCRVTDQI 200
VP ++ +S DL+ A P D++ + A+ E SL+ + +
Sbjct: 736 RVPGLRIVTPRLSADLVLA-------PTGDIPPADAVARRAELGETIASSLSAVSDAEAL 788
Query: 201 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS 260
+ L P +R + WA+ RG+ + G L G+ WAL+ AR L +
Sbjct: 789 IALRPGPH-----VRVAKAWARARGLDAAPLGGLPGLAWALMAARCRDL----------T 833
Query: 261 RFFRVYTQWRWPNPV 275
FF + W +P+
Sbjct: 834 DFFETWAAHSWQDPI 848
>gi|224128147|ref|XP_002329093.1| predicted protein [Populus trichocarpa]
gi|222869762|gb|EEF06893.1| predicted protein [Populus trichocarpa]
Length = 543
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 21/124 (16%)
Query: 40 LYESQEEAVSREEVLGRLDQIVK-IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHG 98
L +QEE SR E + + ++K IW N K+ FGS+R G++
Sbjct: 136 LSPTQEEQASRAEAVRCVFDVIKYIW-----------------PNCKVEVFGSFRTGLYL 178
Query: 99 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSI 156
P +DID + +G + + L + L++ ++ + A VP++KF K SGVS
Sbjct: 179 PTSDIDVVILGSGLKSPQIG-LNALSRALSQKGVAKKIQVIARARVPIVKFVEKRSGVSF 237
Query: 157 DLLY 160
D+ +
Sbjct: 238 DISF 241
>gi|218190338|gb|EEC72765.1| hypothetical protein OsI_06415 [Oryza sativa Indica Group]
Length = 608
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%)
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 218
TVRSLNG V D+ILRLVP TTLRC++
Sbjct: 151 TVRSLNGVHVADEILRLVPDAAALHTTLRCVK 182
>gi|410075647|ref|XP_003955406.1| hypothetical protein KAFR_0A08370 [Kazachstania africana CBS 2517]
gi|372461988|emb|CCF56271.1| hypothetical protein KAFR_0A08370 [Kazachstania africana CBS 2517]
Length = 630
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 30/172 (17%)
Query: 82 ANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 141
+++++ FGSY ++ PG+DID + + EL + L + T + +
Sbjct: 206 SDSELLVFGSYATDLYLPGSDIDCVVNSASGNKEHRSYLYELARFLKKKNLATSIEVIAR 265
Query: 142 AHVPVMKF--KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 199
A VP++KF SGV ID+ + R + ++ +
Sbjct: 266 ARVPIIKFIEPESGVHIDISFER-------------------------TNGVEAAKLIRE 300
Query: 200 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 251
L + P ++ L +F RR + G LGG + LV L+P
Sbjct: 301 WLDMTPGLREL--VLIVKQFLTARRLNDVHTGG-LGGFSIICLVYSFLHLHP 349
>gi|449446931|ref|XP_004141224.1| PREDICTED: PAP-associated domain-containing protein 5-like [Cucumis
sativus]
Length = 544
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 59/238 (24%)
Query: 40 LYESQEEAVSREEVLGRLDQIVK-IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHG 98
L ++EE V+R+ + R+ +VK IW + K+ FGS++ G++
Sbjct: 137 LSPTEEERVARDSAVERVFSVVKHIW-----------------PHCKVEVFGSFQTGLYL 179
Query: 99 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSI 156
P +DID + +G + + L + L++ ++ + A VP++KF K SG+S
Sbjct: 180 PTSDIDVVILG-SGIPKPQLGLQALSRALSQKGIAKKIQVIGKARVPIIKFIEKQSGISF 238
Query: 157 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 216
D+ + D Q NG + D I V K R
Sbjct: 239 DISF-----------------------DVQ-----NGPKAADFIKGAVSKWPPLRPLCLI 270
Query: 217 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP--------SMLVSRFFRVY 266
++ + ++R + +G LG ++ALL + L VP +L+ FF Y
Sbjct: 271 LKVFLQQRELNEVYSGGLG--SYALLTMLMAMLQSINVPPSSLEHNLGVLLVHFFDFY 326
>gi|256271045|gb|EEU06149.1| Pap2p [Saccharomyces cerevisiae JAY291]
Length = 584
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 80/217 (36%), Gaps = 41/217 (18%)
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
++I K IS + QL +A+ + FGSY ++ PG+DID + +
Sbjct: 197 IEIRNKTISTIREAVKQLWPDAD--LHVFGSYSTDLYLPGSDIDCVVTSKLGGKESRNNL 254
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSIDLLYARLSLWVIPEDLDISQDS 178
L L + TE+ V A VP++KF SG+ ID+ + R
Sbjct: 255 YSLASHLKKKKLATEVEVVAKARVPIIKFVEPHSGIHIDVSFER---------------- 298
Query: 179 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 238
NG I + R + ++ + R + + G LGG +
Sbjct: 299 ------------TNGIEAAKLIREWLDDTPGLRELVLIVKQFLHARRLNNVHTGGLGGFS 346
Query: 239 WALLVARICQLYPNAVPS---------MLVSRFFRVY 266
LV ++P + + +L+ FF +Y
Sbjct: 347 IICLVFSFLHMHPRIITNEIDPKDNLGVLLIEFFELY 383
>gi|50557292|ref|XP_506054.1| YALI0F30525p [Yarrowia lipolytica]
gi|49651924|emb|CAG78867.1| YALI0F30525p [Yarrowia lipolytica CLIB122]
Length = 716
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 44 QEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADI 103
QEE + + + +K + R +G + L +AK+ GS+ +H P +DI
Sbjct: 250 QEEVMDFVKYISPTQSEIKARQDLVERVRGAVNGLW--GDAKVHVLGSFTTNMHLPQSDI 307
Query: 104 DTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSIDLLYA 161
D + P E +L ++ +V EL + A VP++KF +GV +D+ +
Sbjct: 308 DLVVCSPHGHYGERACIYQLSSVIRSRMKVAELQTITKARVPIIKFIDSRTGVHVDISFE 367
Query: 162 R 162
+
Sbjct: 368 K 368
>gi|340518876|gb|EGR49116.1| hypothetical protein TRIREDRAFT_61322 [Trichoderma reesei QM6a]
Length = 679
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 92/233 (39%), Gaps = 48/233 (20%)
Query: 38 VNLYESQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVH 97
V+ YE + E++ G+L + +++ +K+ R ANA++F FGS+ G++
Sbjct: 351 VDFYEFVKPRDFEEKIRGKLVENLRLALKRDGR---------NFANAQLFPFGSFVSGLY 401
Query: 98 GPGADIDTLCV-------GPRHATREEDFFGELHQMLT--EMPEVTELHPVPDAHVPVMK 148
P AD+D + G +++ + ++LT + + + A +P++K
Sbjct: 402 LPTADMDVVVCSESFMKGGDATYLSAKNWLYKFRKLLTSQRIANFDSIEVIAHARIPLVK 461
Query: 149 F--KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 206
+ K +G+ +D+ + +L G R + R +
Sbjct: 462 YVDKATGLRVDV----------------------------SFENLGGVRAVETFQRWKKE 493
Query: 207 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLV 259
+ ++ + RG+ V G LGG LV + QL P LV
Sbjct: 494 YPAMPALVTVIKHYLLMRGLNEPVNGGLGGFTVICLVVSMLQLMPEVQSGSLV 546
>gi|190407236|gb|EDV10503.1| DNA polymerase sigma [Saccharomyces cerevisiae RM11-1a]
gi|259149371|emb|CAY86175.1| Pap2p [Saccharomyces cerevisiae EC1118]
Length = 584
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 80/217 (36%), Gaps = 41/217 (18%)
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
++I K IS + QL +A+ + FGSY ++ PG+DID + +
Sbjct: 197 IEIRNKTISTIREAVKQLWPDAD--LHVFGSYSTDLYLPGSDIDCVVTSKLGGKESRNNL 254
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSIDLLYARLSLWVIPEDLDISQDS 178
L L + TE+ V A VP++KF SG+ ID+ + R
Sbjct: 255 YSLASHLKKKNLATEVEVVAKARVPIIKFVEPHSGIHIDVSFER---------------- 298
Query: 179 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 238
NG I + R + ++ + R + + G LGG +
Sbjct: 299 ------------TNGIEAAKLIREWLDDTPGLRELVLIVKQFLHARRLNNVHTGGLGGFS 346
Query: 239 WALLVARICQLYPNAVPS---------MLVSRFFRVY 266
LV ++P + + +L+ FF +Y
Sbjct: 347 IICLVFSFLHMHPRIITNEIDPKDNLGVLLIEFFELY 383
>gi|151945519|gb|EDN63760.1| DNA polymerase sigma [Saccharomyces cerevisiae YJM789]
Length = 584
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 80/217 (36%), Gaps = 41/217 (18%)
Query: 61 VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 120
++I K IS + QL +A+ + FGSY ++ PG+DID + +
Sbjct: 197 IEIRNKTISTIREAVKQLWPDAD--LHVFGSYSTDLYLPGSDIDCVVTSKLGGKESRNNL 254
Query: 121 GELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSIDLLYARLSLWVIPEDLDISQDS 178
L L + TE+ V A VP++KF SG+ ID+ + R
Sbjct: 255 YSLASHLKKKNLATEVEVVAKARVPIIKFVEPHSGIHIDVSFER---------------- 298
Query: 179 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 238
NG I + R + ++ + R + + G LGG +
Sbjct: 299 ------------TNGIEAAKLIREWLDDTPGLRELVLIVKQFLHARRLNNVHTGGLGGFS 346
Query: 239 WALLVARICQLYPNAVPS---------MLVSRFFRVY 266
LV ++P + + +L+ FF +Y
Sbjct: 347 IICLVFSFLHMHPRIITNEIDPKDNLGVLLIEFFELY 383
>gi|349581056|dbj|GAA26214.1| K7_Pap2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 584
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 70/195 (35%), Gaps = 39/195 (20%)
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 142
+A + FGSY ++ PG+DID + + L L + TE+ V A
Sbjct: 217 DADLHVFGSYSTDLYLPGSDIDCVVTSELGGKESRNNLYSLASHLKKKNLATEVEVVAKA 276
Query: 143 HVPVMKF--KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 200
VP++KF SG+ ID+ + R NG I
Sbjct: 277 RVPIIKFVEPHSGIHIDVSFER----------------------------TNGIEAAKLI 308
Query: 201 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS---- 256
+ R + ++ + R + + G LGG + LV ++P + +
Sbjct: 309 REWLDDTPGLRELVLIVKQFLHARRLNNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDP 368
Query: 257 -----MLVSRFFRVY 266
+L+ FF +Y
Sbjct: 369 KDNLGVLLIEFFELY 383
>gi|428181303|gb|EKX50167.1| hypothetical protein GUITHDRAFT_103980 [Guillardia theta CCMP2712]
Length = 760
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 38/181 (20%)
Query: 89 FGSYRLGVHGPGADIDTLCV------------GPRHATREEDFFGELHQMLTEMPEVTEL 136
FGS + G+D+D +C+ G R R F L ++LT + +
Sbjct: 431 FGSSGSNLCSKGSDVD-ICLLIPEEEIQRNAKGQRKTARFRYFLIGLAKLLTRQ-GMMNV 488
Query: 137 HPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 196
P+P+A VP++KF+ AR + LD S D L V ++ C
Sbjct: 489 EPLPNARVPIIKFQ----------AR-------DGLDFSFDCDL------CVNNVLACIN 525
Query: 197 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 256
T+ + R + C++ W K+R +++ G+L ++L+V + Q Y +P
Sbjct: 526 TNLLFTYTMLDARVRPLIMCIKHWVKQRQIHNAFRGYLSSYTYSLMVIQYLQ-YERILPC 584
Query: 257 M 257
+
Sbjct: 585 L 585
>gi|6324457|ref|NP_014526.1| non-canonical poly(A) polymerase PAP2 [Saccharomyces cerevisiae
S288c]
gi|1717744|sp|P53632.1|PAP2_YEAST RecName: Full=Poly(A) RNA polymerase protein 2; AltName: Full=DNA
polymerase kappa; AltName: Full=DNA polymerase sigma;
AltName: Full=Topoisomerase 1-related protein TRF4
gi|663237|emb|CAA88145.1| ORF [Saccharomyces cerevisiae]
gi|950226|gb|AAC49091.1| Trf4p [Saccharomyces cerevisiae]
gi|1419987|emb|CAA99134.1| TRF4 [Saccharomyces cerevisiae]
gi|51830518|gb|AAU09782.1| YOL115W [Saccharomyces cerevisiae]
gi|285814775|tpg|DAA10668.1| TPA: non-canonical poly(A) polymerase PAP2 [Saccharomyces
cerevisiae S288c]
gi|392296670|gb|EIW07772.1| Pap2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 584
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 70/195 (35%), Gaps = 39/195 (20%)
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 142
+A + FGSY ++ PG+DID + + L L + TE+ V A
Sbjct: 217 DADLHVFGSYSTDLYLPGSDIDCVVTSELGGKESRNNLYSLASHLKKKNLATEVEVVAKA 276
Query: 143 HVPVMKF--KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 200
VP++KF SG+ ID+ + R NG I
Sbjct: 277 RVPIIKFVEPHSGIHIDVSFER----------------------------TNGIEAAKLI 308
Query: 201 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS---- 256
+ R + ++ + R + + G LGG + LV ++P + +
Sbjct: 309 REWLDDTPGLRELVLIVKQFLHARRLNNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDP 368
Query: 257 -----MLVSRFFRVY 266
+L+ FF +Y
Sbjct: 369 KDNLGVLLIEFFELY 383
>gi|401623740|gb|EJS41828.1| trf4p [Saccharomyces arboricola H-6]
Length = 573
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 73/196 (37%), Gaps = 41/196 (20%)
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 142
+A + FGSY ++ PG+DID + + L L + TE+ V A
Sbjct: 209 DADLHVFGSYSTDLYLPGSDIDCVITSELGGKESRNNLFSLASHLKKKNLATEIEVVAKA 268
Query: 143 HVPVMKF--KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 200
VP++KF SG+ ID+ + R L ++ +
Sbjct: 269 RVPIIKFVEPNSGIHIDVSFER-------------------------TNGLEAAKLIREW 303
Query: 201 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNV-AGFLGGINWALLVARICQLYPNAVPS--- 256
L P ++ L +F RR +NV G LGG + LV ++P +
Sbjct: 304 LNDTPGLREL--VLIVKQFLHSRR--LNNVHTGGLGGFSIICLVFSFLHMHPRIITKEIE 359
Query: 257 ------MLVSRFFRVY 266
+L+ FF +Y
Sbjct: 360 AKDNLGVLLIEFFELY 375
>gi|67989518|ref|NP_001018181.1| poly(A) polymerase Cid14 [Schizosaccharomyces pombe 972h-]
gi|81175166|sp|Q9UTN3.2|CID14_SCHPO RecName: Full=Poly(A) RNA polymerase cid14; Short=PAP; AltName:
Full=Caffeine-induced death protein 14; AltName:
Full=Polynucleotide adenylyltransferase cid14
gi|62554069|emb|CAI79317.1| poly(A) polymerase Cid14 [Schizosaccharomyces pombe]
Length = 684
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 75/183 (40%), Gaps = 34/183 (18%)
Query: 74 LNDQLLQE-ANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR--EEDFFGELHQMLTEM 130
+N +LQ+ + ++ FGS+ ++ P +D+D + + P H R ++D F H L ++
Sbjct: 269 INQAVLQKWPDVSLYVFGSFETKLYLPTSDLDLVIISPEHHYRGTKKDMFVLAHH-LKKL 327
Query: 131 PEVTELHPVPDAHVPVMKF--KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 188
+E+ + A+VP++KF + V +D+ + +
Sbjct: 328 KLASEVQVITTANVPIIKFVDPLTKVHVDISFNQPG------------------------ 363
Query: 189 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 248
L C V + ++ P + R + ++ + R + G L LV Q
Sbjct: 364 -GLKTCLVVNGFMKKYPAL---RPLVIIIKHFLNMRALNEVFLGGLSSYAIVCLVVSFLQ 419
Query: 249 LYP 251
L+P
Sbjct: 420 LHP 422
>gi|444314869|ref|XP_004178092.1| hypothetical protein TBLA_0A07840 [Tetrapisispora blattae CBS 6284]
gi|387511131|emb|CCH58573.1| hypothetical protein TBLA_0A07840 [Tetrapisispora blattae CBS 6284]
Length = 711
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 43 SQEEAVSREEVLGRLDQIVK-IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGA 101
S+EE R + +G++ + VK +W N+ ++ FGSY ++ PG+
Sbjct: 219 SREEIELRNQTIGKIRKAVKKLW-----------------KNSDLYVFGSYATDLYLPGS 261
Query: 102 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSIDLL 159
DID + + +L L + T++ + A VP++KF S + ID+
Sbjct: 262 DIDCVIISSAGDKENRHSLYQLSSWLKQNKLATKVEVIAKARVPIIKFVEPSSNIHIDVS 321
Query: 160 YAR 162
+ R
Sbjct: 322 FER 324
>gi|429327416|gb|AFZ79176.1| nucleotidyltransferase domain containing protein [Babesia equi]
Length = 520
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 43 SQEEAVSREEVLGRLDQIVKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGAD 102
S+EE +++E+VL +L+ +V NAK+ FGSY G+ PG D
Sbjct: 146 SKEERIAKEQVLMQLEIVVNALF----------------PNAKMRAFGSYATGLSLPGGD 189
Query: 103 IDTL--CVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSIDL 158
ID C GP E L L + V + + +VPV+K K +GV +D+
Sbjct: 190 IDVFIECEGP-----ELCILNMLVYALNRLGLVHSFECIYNTNVPVVKLVDKRTGVRLDI 244
>gi|50286703|ref|XP_445781.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525087|emb|CAG58700.1| unnamed protein product [Candida glabrata]
Length = 485
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 91/237 (38%), Gaps = 59/237 (24%)
Query: 43 SQEEAVSREEVLGRLDQIVK-IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGA 101
S+EE +R +G + VK +W +A + FGSY ++ PG+
Sbjct: 117 SKEEIETRNRTIGSIRSAVKELW-----------------PDADLHVFGSYATDLYLPGS 159
Query: 102 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSIDLL 159
DID + + + + +L L + TE+ V A VP++KF S +D+
Sbjct: 160 DIDCVVNSKQGDKQSRNNLYKLANFLKKKEIATEIEVVAKARVPIIKFVEVESRTHMDIS 219
Query: 160 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 219
+ RL+ L ++ L P ++ L +F
Sbjct: 220 FERLN-------------------------GLEAAKLIRDWLASTPGLREL--VLVVKQF 252
Query: 220 WAKRRGVYSNV-AGFLGGINWALLVARICQLYPNAVPS---------MLVSRFFRVY 266
RR +NV +G LGG + LV +++P + + +L+ FF +Y
Sbjct: 253 LHSRR--LNNVHSGGLGGFSIICLVYSFLRMHPRIITAEIDPLENLGVLLIEFFELY 307
>gi|330841067|ref|XP_003292526.1| hypothetical protein DICPUDRAFT_157248 [Dictyostelium purpureum]
gi|325077222|gb|EGC30949.1| hypothetical protein DICPUDRAFT_157248 [Dictyostelium purpureum]
Length = 532
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 80 QEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPV 139
Q +N K+ +GSY +G+ P +DID + D + ++ Q L P L
Sbjct: 304 QLSNKKLSKYGSYVIGLSSPDSDIDVALLNG------ADIYDKVLQKLKSNPSYEILEIR 357
Query: 140 PDAHVPVMKF--KFSGVSIDL 158
PDA +P+++F K + V DL
Sbjct: 358 PDAKIPIIRFSDKINLVKFDL 378
>gi|328860813|gb|EGG09918.1| hypothetical protein MELLADRAFT_115680 [Melampsora larici-populina
98AG31]
Length = 987
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 79 LQEANAKIFTFGSYRLGVHGPGADIDTLCVGPR-HATREEDFFGELHQMLTEMPEVTELH 137
+Q +A + FGS+ ++ PG DID + + R + L +L E ++
Sbjct: 268 MQWPDADVVPFGSFGTKLYLPGGDIDLVILSTRMMKDAKSKILYRLAPLLREQNIGQDVV 327
Query: 138 PVPDAHVPVMKFK--FSGVSIDLLYAR----LSLWVIPEDLD----ISQDSILQNADEQT 187
+ A VP++KFK F +D+ + ++L + E LD +S+D + Q
Sbjct: 328 VIAKAKVPIIKFKTIFGNFQVDISINQSNGLVALEKVNELLDDVKYLSKDLRAEQRHHQH 387
Query: 188 VRSLNGCRVTDQILRL------VPKIQNFRTTLRCM----RFWAKRRGVYSNVAGFLGGI 237
R+ + R + L + + K+ +CM + K+RG+ +G LG
Sbjct: 388 SRNQSKRRNEETNLEMDEEEEAISKVVEELGAAKCMILVIKSVLKQRGMNEVYSGGLGSY 447
Query: 238 NWALLVARICQLY---------PNAVPSMLVSRFFRVY 266
+ LV QL+ PN +L+ FF +Y
Sbjct: 448 SIICLVISFLQLHPKIQRGDIDPNKNLGVLLLEFFELY 485
>gi|449498731|ref|XP_004160618.1| PREDICTED: uncharacterized protein LOC101229001 [Cucumis sativus]
Length = 384
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 21/124 (16%)
Query: 40 LYESQEEAVSREEVLGRLDQIVK-IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHG 98
L ++EE V+R+ + R+ +VK IW + K+ FGS++ G++
Sbjct: 208 LSPTEEERVARDSAVERVFSVVKHIW-----------------PHCKVEVFGSFQTGLYL 250
Query: 99 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSI 156
P +DID + +G + + L + L++ ++ + A VP++KF K SG+S
Sbjct: 251 PTSDIDVVILG-SGIPKPQLGLQALSRALSQKGIAKKIQVIGKARVPIIKFIEKQSGISF 309
Query: 157 DLLY 160
D+ +
Sbjct: 310 DISF 313
>gi|365982357|ref|XP_003668012.1| hypothetical protein NDAI_0A06140 [Naumovozyma dairenensis CBS 421]
gi|343766778|emb|CCD22769.1| hypothetical protein NDAI_0A06140 [Naumovozyma dairenensis CBS 421]
Length = 684
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 20/123 (16%)
Query: 43 SQEEAVSREEVLGRLDQIVK-IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGA 101
S+EE R + + +L + VK +W +++++ FGSY ++ PG+
Sbjct: 219 SREEIELRNKTISKLRKAVKELW-----------------SDSQLHIFGSYATDLYLPGS 261
Query: 102 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSIDLL 159
DID + + + +L + L + +++ + A VP++KF K S + ID+
Sbjct: 262 DIDCVVNSKMGDKEQRQYLYDLARHLKQKGLTSQVEVIAKARVPIIKFVEKSSQIHIDVS 321
Query: 160 YAR 162
+ R
Sbjct: 322 FER 324
>gi|357130698|ref|XP_003566984.1| PREDICTED: PAP-associated domain-containing protein 5-like
[Brachypodium distachyon]
Length = 619
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 43 SQEEAVSREEVLGRLDQIVK-IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGA 101
S EE SR + + +VK IW + K+ FGS+R G++ P +
Sbjct: 190 SAEEQSSRTAAVQAVSDVVKHIW-----------------PHCKVEVFGSFRTGLYLPTS 232
Query: 102 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSIDLL 159
DID + R T + + L + L++ ++ + A VP++KF + SG+ D+
Sbjct: 233 DIDVVIFESRVKTPQVGLYA-LAKALSQKGVAKKIQVIAKARVPIVKFVERVSGIPFDIS 291
Query: 160 Y 160
+
Sbjct: 292 F 292
>gi|356530683|ref|XP_003533910.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 134
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 209 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 242
+F TTL C++FWAK RG+YSNV FL + W L
Sbjct: 103 HFLTTLCCLKFWAKGRGIYSNV--FLVVLTWHFL 134
>gi|444729496|gb|ELW69909.1| Ras-associating and dilute domain-containing protein [Tupaia
chinensis]
Length = 1158
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI 60
GI+ PISLA P D D T+KL + L+ ++E +EE SR +L +L+ +
Sbjct: 22 GISSPISLAAPKDTDCELTQKLIETLKPFGVFEEEEELQSRILILEKLNNL 72
>gi|359493669|ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing protein 5-like [Vitis
vinifera]
gi|302143015|emb|CBI20310.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 83 NAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 142
N K+ FGS++ G++ P +DID + +G T + + L + L++ ++ + A
Sbjct: 143 NCKVEVFGSFKTGLYLPTSDIDVVILGSDIKTPQIGLYA-LSRALSQKGIAKKIQVIAKA 201
Query: 143 HVPVMKF--KFSGVSIDLLY 160
VP++KF K S V+ D+ +
Sbjct: 202 RVPIIKFIEKRSSVAFDISF 221
>gi|71021859|ref|XP_761160.1| hypothetical protein UM05013.1 [Ustilago maydis 521]
gi|46100598|gb|EAK85831.1| hypothetical protein UM05013.1 [Ustilago maydis 521]
Length = 1174
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 32/169 (18%)
Query: 84 AKIFTFGSYRLGVHGPGADIDTLCV---------GPRHATREEDFFGELHQMLTEMPEVT 134
AK+ FGS G +D+D C+ P+H E L Q++ E + T
Sbjct: 391 AKLLAFGSMANGFALRNSDMDLCCLMGKRDDAQPTPQHTASE--LVEILGQLIREETDFT 448
Query: 135 ELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGC 194
+ P+P A +P++K S + DL Y I D+ L+N R L
Sbjct: 449 VM-PLPKARIPIIKISRSPTA-DLPYE------IACDIGFENRLALEN-----TRLLLSY 495
Query: 195 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
+ D Q RT + ++ WAKRR + S G L + L+V
Sbjct: 496 AMVDP--------QRLRTLVLFLKVWAKRRKLNSPYMGTLSSYGYTLMV 536
>gi|358342231|dbj|GAA49742.1| poly(A) polymerase [Clonorchis sinensis]
Length = 373
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 350 WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY---NMLQ 406
W LFEP FF Y++Y+ + ++ G VESRLR L E + Y +
Sbjct: 46 WSNLFEPAFFFR-YRHYVVVIVTGSAKRSFLELCGLVESRLRVLVSNFELNRYVKIAHVN 104
Query: 407 CHPHPGDFSDKSKPLYCSYFMGLQ 430
C + SD+ L +F+G++
Sbjct: 105 CRSYGKGPSDEDAELVRKWFIGME 128
>gi|242053947|ref|XP_002456119.1| hypothetical protein SORBIDRAFT_03g030810 [Sorghum bicolor]
gi|241928094|gb|EES01239.1| hypothetical protein SORBIDRAFT_03g030810 [Sorghum bicolor]
Length = 568
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 51/210 (24%)
Query: 43 SQEEAVSREEVLGRLDQIVK-IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGA 101
S EE SR + + +VK IW K+ FGS+R G++ P +
Sbjct: 155 STEEQSSRTAAVQDVSDVVKHIW-----------------PQCKVEVFGSFRTGLYLPTS 197
Query: 102 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSIDLL 159
DID + R T + + L + L++ ++ + A VP++KF + SG++ D+
Sbjct: 198 DIDVVVFESRVKTPQVGLYA-LAKALSQKGVAKKIQVIAKARVPIVKFVERKSGIAFDIS 256
Query: 160 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 219
+ D+D G + D I V K+ R ++
Sbjct: 257 F----------DMD------------------GGPQAADFIKDAVKKLPALRPLCMILKV 288
Query: 220 WAKRRGVYSNVAGFLGGINWALLVARICQL 249
+ +R + G +G ++ALL I L
Sbjct: 289 FLHQRELNEVYTGGIG--SYALLTMLITHL 316
>gi|125581305|gb|EAZ22236.1| hypothetical protein OsJ_05891 [Oryza sativa Japonica Group]
Length = 126
Score = 41.2 bits (95), Expect = 2.1, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 187 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 236
TVRSLNG RV D+ILRLVP F TT A R G+ + GF G
Sbjct: 32 TVRSLNGVRVADEILRLVPDAAAFHTTA------AVREGIDKLLRGFDGA 75
>gi|226500652|ref|NP_001146769.1| uncharacterized protein LOC100280371 [Zea mays]
gi|219888671|gb|ACL54710.1| unknown [Zea mays]
Length = 214
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 458 MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 493
MY+L KPGM ++V HV R +P++VF G + P+
Sbjct: 1 MYSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCPT 36
>gi|414881049|tpg|DAA58180.1| TPA: hypothetical protein ZEAMMB73_639297, partial [Zea mays]
Length = 260
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 43 SQEEAVSREEVLGRLDQIVK-IWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGA 101
S EE SR + + +VK IW K+ FGS+R G++ P +
Sbjct: 145 STEEQSSRAAAVQDVSDVVKHIW-----------------PQCKVEVFGSFRTGLYLPTS 187
Query: 102 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF--KFSGVSIDLL 159
DID + R T + + L + L++ ++ + A VP++KF + SG++ D+
Sbjct: 188 DIDVVIFESRVKTPQVGLYA-LAKALSQKGVAKKIQVIAKARVPIVKFVERKSGIAFDIS 246
Query: 160 Y 160
+
Sbjct: 247 F 247
>gi|440493090|gb|ELQ75598.1| DNA polymerase sigma [Trachipleistophora hominis]
Length = 288
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 44/248 (17%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDV---NLYESQEEAVSREEVLGRLDQIVKIWVKKISRA 71
I P+D+++ R + K ++++ L E + E +E G D KI K
Sbjct: 52 IEFLRPSDEEVTLRRVMIKRVKELILNGLEEIKRERTCAKEGNGYFDNTSKIREKDGIEN 111
Query: 72 KGLNDQLLQEANA------KIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHQ 125
K +D+ E N ++ FGSY G++ PG+DID T E+D +L
Sbjct: 112 KS-DDKSAVEKNENQICEDRVECFGSYETGLYLPGSDIDLTLF-----TDEKDALKKLQG 165
Query: 126 MLTEMPEV--TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 183
L P + + + A +P+++F +D+ + R DL ++Q+S
Sbjct: 166 FLCTSPFIFTKSVIFLSKARIPILRF------MDVCHFRY-------DLSLNQES----- 207
Query: 184 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 243
+ R + L+ P I++ L +++ K RG+ + G L L++
Sbjct: 208 ------GIIHTRFIKKALKQQPYIKDLSLFL---KYFLKSRGLNESKRGGLCSYAQLLML 258
Query: 244 ARICQLYP 251
L+P
Sbjct: 259 INFLNLHP 266
>gi|428182086|gb|EKX50948.1| hypothetical protein GUITHDRAFT_66394 [Guillardia theta CCMP2712]
Length = 242
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 24/122 (19%)
Query: 136 LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR 195
+ +P A VP++KFK + +D ++ D D+S +++L C
Sbjct: 4 VEALPYARVPIIKFK-AQDGLDFVF----------DCDLSVNNVL------------ACI 40
Query: 196 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP 255
TD + + R + C++ W K+R ++ G+L + L+V + Q Y +P
Sbjct: 41 NTDLLFTYTMLDKRVRPLIMCIKHWVKQRRIHKTFRGYLSSYTYTLMVIQYLQ-YERVLP 99
Query: 256 SM 257
+
Sbjct: 100 CL 101
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,772,719,285
Number of Sequences: 23463169
Number of extensions: 506667836
Number of successful extensions: 1244024
Number of sequences better than 100.0: 920
Number of HSP's better than 100.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 1240622
Number of HSP's gapped (non-prelim): 1240
length of query: 732
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 582
effective length of database: 8,839,720,017
effective search space: 5144717049894
effective search space used: 5144717049894
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)