BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004768
(732 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/478 (37%), Positives = 267/478 (55%), Gaps = 7/478 (1%)
Query: 238 GRFVDSKSLTSI-----DVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTN 292
G F+D K + ++ NPAT + V L+++ W T
Sbjct: 28 GHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQR 87
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV 352
R R+ KF +L+ + ++LA ++ EHGKT+ DA D++RGLE+ E G+ LQ EF
Sbjct: 88 RARVFXKFVQLLNDNXNELAEXLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFT 147
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXX 412
G+D YSIR+P+G+ AGI F+FP P W F A+ CGN FILKPSE+ P
Sbjct: 148 EGAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIR 207
Query: 413 XXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKGKRI 472
LP G+LN+V+G + A++ VG +Y A+ GKR
Sbjct: 208 LAELXIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRA 267
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWE--DKLVE 530
QC GAKNH ++ PDA +D +AL+ AG+G AG++C A++ V VG T DKLV
Sbjct: 268 QCFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVP 327
Query: 531 HAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNF 590
+++++ T+ AD GPV++K+ ++R+ LI E GAKL++DGR+ + GYENG+F
Sbjct: 328 XVESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHF 387
Query: 591 IGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAAR 650
IG + DVT + + YK ++FGPVL ++A + +EA+ + ++ +G+G +I+T AAR
Sbjct: 388 IGGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAAR 447
Query: 651 KFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708
F I +G VG+NVPI V + F K GDLN G I F+T+ KT+T +W
Sbjct: 448 DFASRINIGXVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 334 bits (857), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 269/479 (56%), Gaps = 4/479 (0%)
Query: 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPV 290
++ N I G +V+SK+ DVVNPAT+ ++ QVP+ST W V
Sbjct: 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAV 64
Query: 291 TNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE 350
R RI+F FQ+L+ + ++LA IT E+GK +A +V RG+E VE A G +L +G+
Sbjct: 65 PRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGD 124
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+++I+ V+ + R P+GV GI F+FP M P WMFP+A+ GNTFILKPSE+ P
Sbjct: 125 SLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLT 184
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKGK 470
LP GV N+V+G +KAI+ VG +Y + S K
Sbjct: 185 EKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLK 244
Query: 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLV 529
R+Q GAKNH +V+ DA+++ T++ +V A FG AG++CMA V GI + KL
Sbjct: 245 RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQ 304
Query: 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589
E IK+ G + LGPVI + K+R I+ E GA+L+ DGR + ++G
Sbjct: 305 EKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVS---DDGY 361
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
F+GPTI +VT M +K+++F PVL ++ +++ EAIEI N++ +GA +FT+++ A
Sbjct: 362 FVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAI 421
Query: 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708
R F+ I G +GIN+ + F F+ K F G L+ +GK + FYT+ K VT ++
Sbjct: 422 RYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 210/482 (43%), Gaps = 8/482 (1%)
Query: 234 NLIGGRFVDSK-SLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTN 292
N GGR + SK T+ V PAT ++ Q+ W
Sbjct: 22 NYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIE 81
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV 352
R R+M + +IR D +A +GKT+T+A D+ + +E+ G+A G+ +
Sbjct: 82 RSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHI 141
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXX 412
+ G Y+ REPLGVCAGI ++++P M W A+ CGN + KPS P
Sbjct: 142 -QLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVI 200
Query: 413 XXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKGKRI 472
+P G++N+V G V ++ G + ++ K +
Sbjct: 201 LAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHV 260
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP-WEDKLVEH 531
+G K+ ++ D ++ + + A F GQ C T V I P + +++V+
Sbjct: 261 TLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKR 320
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV--PGYENGN 589
KAI V + +G +ISK + +++ + + GA++L G + P +NG
Sbjct: 321 TKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGY 380
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
F+ P +L + +M C KE++FGPV+ + ++ +E ++ N G + +FT A
Sbjct: 381 FMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRA 440
Query: 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK 709
+ + G IN S+ P F K G N G+ + +Y+Q+KTV +
Sbjct: 441 HRVAANLEAGTCYINT-YSISPVEVPFGGYKMSGFGREN--GQATVDYYSQLKTVIVEMG 497
Query: 710 DL 711
D+
Sbjct: 498 DV 499
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 196/428 (45%), Gaps = 18/428 (4%)
Query: 285 WRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRG-LEIVEHACGV 343
WR + R R++ K +LI RD LA GK ++AY L G ++ + + G
Sbjct: 77 WRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 136
Query: 344 ATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403
A G + N TY+ EP+GVC I ++FP + LW A++CGNT ++KP+
Sbjct: 137 ADKIQGRTIPMDGN-FFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 195
Query: 404 EKVPXXXXXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGPNSDVADIY 462
E+ P P GV+NIV G V +A G +++V +
Sbjct: 196 EQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG-STEVGKLI 254
Query: 463 SRASAKG--KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGG 520
A+ K KR+ +G K+ +V DA +D + F GQ C+A + +
Sbjct: 255 KEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEES 314
Query: 521 I-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRN 579
I + + VE AK + GP I K++ E++ LI+ + GAKL G
Sbjct: 315 IYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG- 373
Query: 580 ILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGA 639
P G FI PT+ SDVT +M KE++FGPV M+ +S+D+ I+ N +G A
Sbjct: 374 ---PWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSA 430
Query: 640 SIFTTSAVAARKFQIEIAVGQVGINVP--ISVQPPFTLFTSSKPCFAGDLNCDGKGGIHF 697
IFT A + G V +N +S Q PF F S G+ G+ G H
Sbjct: 431 GIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMS-----GNGRELGEYGFHE 485
Query: 698 YTQIKTVT 705
YT++KTVT
Sbjct: 486 YTEVKTVT 493
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 212/479 (44%), Gaps = 8/479 (1%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQR 295
IGGR+V++ S + + +NPA ++++V ++ W R R
Sbjct: 11 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 70
Query: 296 IMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSN 354
I+ + +++R D+LA T + GK L + + D++ G +++E+ G+ GE +
Sbjct: 71 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP- 129
Query: 355 ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXX 414
+ Y+ REPLGV AGI ++++P LW A+ GN I KPSE P
Sbjct: 130 LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 189
Query: 415 XXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASAKG-KRI 472
+P+GV N++ G+ ++ I+ G S + + AS+ K +
Sbjct: 190 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 249
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGITPWEDKLVEH 531
+G K+ ++ PDA +D V A F +GQ C T V ++ +E K++E
Sbjct: 250 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLER 309
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFI 591
+ I++ + N + GP++S E + I+ A+LL G + + G ++
Sbjct: 310 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 369
Query: 592 GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651
PT+ +D +M +E++FGPV+ + + DEAI N +G A + T A +
Sbjct: 370 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 429
Query: 652 FQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKD 710
+ G IN P K G N G + YT+IK+V + D
Sbjct: 430 AIHRLEAGICWINT-WGESPAEMPVGGYKQSGVGREN--GLTTLAHYTRIKSVQVELGD 485
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 212/479 (44%), Gaps = 8/479 (1%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQR 295
IGGR+V++ S + + +NPA ++++V ++ W R R
Sbjct: 10 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 69
Query: 296 IMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSN 354
I+ + +++R D+LA T + GK L + + D++ G +++E+ G+ GE +
Sbjct: 70 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP- 128
Query: 355 ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXX 414
+ Y+ REPLGV AGI ++++P LW A+ GN I KPSE P
Sbjct: 129 LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 188
Query: 415 XXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASAKG-KRI 472
+P+GV N++ G+ ++ I+ G S + + AS+ K +
Sbjct: 189 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 248
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGITPWEDKLVEH 531
+G K+ ++ PDA +D V A F +GQ C T V ++ +E K++E
Sbjct: 249 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLER 308
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFI 591
+ I++ + N + GP++S E + I+ A+LL G + + G ++
Sbjct: 309 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 368
Query: 592 GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651
PT+ +D +M +E++FGPV+ + + DEAI N +G A + T A +
Sbjct: 369 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 428
Query: 652 FQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKD 710
+ G IN P K G N G + YT+IK+V + D
Sbjct: 429 AIHRLEAGICWINT-WGESPAEMPVGGYKQSGVGREN--GLTTLAHYTRIKSVQVELGD 484
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 212/479 (44%), Gaps = 8/479 (1%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQR 295
IGGR+V++ S + + +NPA ++++V ++ W R R
Sbjct: 10 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 69
Query: 296 IMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSN 354
I+ + +++R D+LA T + GK L + + D++ G +++E+ G+ GE +
Sbjct: 70 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP- 128
Query: 355 ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXX 414
+ Y+ REPLGV AGI ++++P LW A+ GN I KPSE P
Sbjct: 129 LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 188
Query: 415 XXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASAKG-KRI 472
+P+GV N++ G+ ++ I+ G S + + AS+ K +
Sbjct: 189 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 248
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGITPWEDKLVEH 531
+G K+ ++ PDA +D V A F +GQ C T V ++ +E K++E
Sbjct: 249 TMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLER 308
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFI 591
+ I++ + N + GP++S E + I+ A+LL G + + G ++
Sbjct: 309 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 368
Query: 592 GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651
PT+ +D +M +E++FGPV+ + + DEAI N +G A + T A +
Sbjct: 369 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 428
Query: 652 FQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKD 710
+ G IN P K G N G + YT+IK+V + D
Sbjct: 429 AIHRLEAGICWINT-WGESPAEMPVGGYKQSGVGREN--GLTTLAHYTRIKSVQVELGD 484
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 211/479 (44%), Gaps = 8/479 (1%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQR 295
IGGR+V++ S + + +NPA ++++V ++ W R R
Sbjct: 11 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 70
Query: 296 IMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSN 354
I+ + +++R D+LA T + GK L + + D++ G +++E+ G+ GE +
Sbjct: 71 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP- 129
Query: 355 ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXX 414
+ Y+ REPLGV AGI ++++P LW A+ GN I KPSE P
Sbjct: 130 LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 189
Query: 415 XXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASAKG-KRI 472
+P+GV N++ G+ ++ I+ G S + + AS+ K +
Sbjct: 190 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 249
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGITPWEDKLVEH 531
+G K+ ++ PDA +D V A F +GQ T V ++ +E K++E
Sbjct: 250 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQARFEAKVLER 309
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFI 591
+ I++ + N + GP++S E + I+ A+LL G + + G ++
Sbjct: 310 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 369
Query: 592 GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651
PT+ +D +M +E++FGPV+ + + DEAI N +G A + T A +
Sbjct: 370 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 429
Query: 652 FQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKD 710
+ G IN P K G N G + YT+IK+V + D
Sbjct: 430 AIHRLEAGICWINT-WGESPAEMPVGGYKQSGVGREN--GLTTLAHYTRIKSVQVELGD 485
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 211/479 (44%), Gaps = 8/479 (1%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQR 295
IGGR+V++ S + + +NPA ++++V ++ W R R
Sbjct: 11 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 70
Query: 296 IMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSN 354
I+ + +++R D+LA T + GK L + + D++ G +++E+ G+ GE +
Sbjct: 71 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP- 129
Query: 355 ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXX 414
+ Y+ REPLGV AGI ++++P LW A+ GN I KPSE P
Sbjct: 130 LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 189
Query: 415 XXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASAKG-KRI 472
+P+GV N++ G+ ++ I+ G S + + AS+ K +
Sbjct: 190 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 249
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGITPWEDKLVEH 531
+G K+ ++ PDA +D V A F +GQ T V ++ +E K++E
Sbjct: 250 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQARFEAKVLER 309
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFI 591
+ I++ + N + GP++S E + I+ A+LL G + + G ++
Sbjct: 310 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 369
Query: 592 GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651
PT+ +D +M +E++FGPV+ + + DEAI N +G A + T A +
Sbjct: 370 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 429
Query: 652 FQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKD 710
+ G IN P K G N G + YT+IK+V + D
Sbjct: 430 AIHRLEAGICWINT-WGESPAEMPVGGYKQSGVGREN--GLTTLAHYTRIKSVQVELGD 485
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 211/488 (43%), Gaps = 18/488 (3%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLST--NXXXXXXXXXXXXXXXXWRNTPVTN 292
I G + + I V+NP+T+ I+ +P +T + W T +
Sbjct: 11 FIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSGAH 70
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV 352
R + I D T + GK +A D+ E+ G A G+
Sbjct: 71 RATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALDGKQK 130
Query: 353 SNISNGVDTYS---IREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXX 409
+ ++ ++ + +R+PLGV I +++P + W A+ G T +LKPSE
Sbjct: 131 APVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASVT 190
Query: 410 XXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASAK 468
LP GVLNI+ G V IA G ++ + + + A+
Sbjct: 191 CLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQL 250
Query: 469 GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP-WEDK 527
K + +G K+ VV D ID + + F GQ C A + ++ I + DK
Sbjct: 251 VKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEFVDK 310
Query: 528 LVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY-E 586
LV+ K IK++ E LGPVISK + +++ + I GA +L G P + +
Sbjct: 311 LVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSR---PEHLK 367
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
G +I PTI++D++ +M+ +KE+VFGPVL S DEAI + N +G A++F+
Sbjct: 368 KGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDL 427
Query: 647 VAARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
+ + VG V +N P VQ P+ S F +L G+ GI Y IK V
Sbjct: 428 ERCERITKALEVGAVWVNCSQPCFVQAPWGGIKRSG--FGREL---GEWGIQNYLNIKQV 482
Query: 705 TQQWKDLP 712
TQ D P
Sbjct: 483 TQDISDEP 490
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 213/490 (43%), Gaps = 35/490 (7%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX---WRNTPVT 291
I + +S S + V NPAT+ + +V + WR +
Sbjct: 24 FINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDAS 83
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVA------ 344
R ++++K +LI RD LA + GK AY D+ ++ + + G A
Sbjct: 84 ERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGR 143
Query: 345 TLQI-GEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403
T+ + GEF S Y+ EP+GVC I ++ P + A+ CGNT I+KP+
Sbjct: 144 TIPVDGEFFS--------YTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPA 195
Query: 404 EKVPXXXXXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGPNSDVADIY 462
E+ P P GV+NIV G V +A G +++V +
Sbjct: 196 EQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG-STEVGKMI 254
Query: 463 SRASAKG--KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGG 520
A+AK KR+ +GAKN +V DA +D+ + F GQ C+A + +
Sbjct: 255 QEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEA 314
Query: 521 IT-PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRN 579
I + + VE AK + GP I+K + ++ LI+ + GAKL G
Sbjct: 315 IYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGG- 373
Query: 580 ILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGA 639
P G FI PT+ S+VT +M KE++FGPV M+ +S+DE I+ N +G A
Sbjct: 374 ---PWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVA 430
Query: 640 SIFTTSAVAARKFQIEIAVGQVGIN--VPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHF 697
+FT A + G V +N + S Q P F S G G+ GIH
Sbjct: 431 GVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMS-----GHGREMGEYGIHE 485
Query: 698 YTQIKTVTQQ 707
YT++KTVT +
Sbjct: 486 YTEVKTVTMK 495
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 197/428 (46%), Gaps = 18/428 (4%)
Query: 285 WRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRG-LEIVEHACGV 343
WR + R R++ K +L+ RD LA + GK A+ L+G ++ + + G
Sbjct: 75 WRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGW 134
Query: 344 ATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403
A +I + T++ EP+GVC I ++FP + W A+ CGNT ++KP+
Sbjct: 135 AD-KIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPA 193
Query: 404 EKVPXXXXXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGPNSDVADIY 462
E+ P P GV+NI+ G + IA G +++V +
Sbjct: 194 EQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTG-STEVGKLI 252
Query: 463 SRASAKG--KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGG 520
A+ + KR+ +G K+ ++ DA +D + F GQ C A + +
Sbjct: 253 QEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEES 312
Query: 521 I-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRN 579
I + + VE AK V + + + GP I K++ ++ LIQ GAKL G+
Sbjct: 313 IYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKG 372
Query: 580 ILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGA 639
+ G+ FI PT+ S+VT +M KE++FGPV ++ +++DE IE N + G A
Sbjct: 373 LGRKGF----FIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVA 428
Query: 640 SIFTTSAVAARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHF 697
++FT A + G V IN ++ Q PF F S G+ G+ G+
Sbjct: 429 AVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMS-----GNGREMGEFGLRE 483
Query: 698 YTQIKTVT 705
Y+++KTVT
Sbjct: 484 YSEVKTVT 491
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 214/499 (42%), Gaps = 15/499 (3%)
Query: 215 NYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXX 274
+++++ E R + P + + I G FV S+S + ++PAT ++
Sbjct: 11 SWETIEEVRRRLKERPAL-HFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRA 69
Query: 275 XXXXXXXXXXWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGL 334
W T R+R + + ELI + D+LA+ + G+ L V R
Sbjct: 70 AKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAA 129
Query: 335 EIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTC 394
E A + + + Y++R P G I ++ P M W A+
Sbjct: 130 ENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAF 189
Query: 395 GNTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGP 454
GNT +LKP+E P LP GV N+V G + + +
Sbjct: 190 GNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTG 249
Query: 455 NSDVADIYSRASAKG-KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT 513
++ I R +A KR+ +G K+ A+V DA ++ L A+V F G++C A +
Sbjct: 250 ETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASS 309
Query: 514 TVVYVGGITPWED---KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESG 570
++ I +ED K+VE A+AI+V + ++GP+I + +R+ ++ G
Sbjct: 310 RLLVEEKI--FEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREG 367
Query: 571 AKLLLDGRNILV----PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626
A+LL+ G GN++ PT+ +M+ +E++FGPVL+ + + +EA
Sbjct: 368 ARLLVGGERAKTSFRGEDLSRGNYLLPTVFVGEN-HMKIAQEEIFGPVLVAIPFKDEEEA 426
Query: 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGD 686
+ N ++G A +FT A + +E+ G V +N P T F K +GD
Sbjct: 427 LRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLP-TPFGGVKG--SGD 483
Query: 687 LNCDGKGGIHFYTQIKTVT 705
G + FYT +KT+
Sbjct: 484 RREGGTYALDFYTDLKTIA 502
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 209/473 (44%), Gaps = 5/473 (1%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNR 293
N IGG++V S +ID+++P+T ++ ++P W R
Sbjct: 15 NFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTR 74
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
Q ++ F IR + LA + +E GK L+ A +V +++ C A G+ +
Sbjct: 75 QNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILP 134
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXX 413
+ + Y + P GV GI +++FP A+ GNT +LKP+++ P
Sbjct: 135 SDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTEL 194
Query: 414 XXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXV-KAIALVGPNSDVADIYSRASAKGKRI 472
LP+GVLN+++GT + K I + G IY ++ +
Sbjct: 195 GRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPV 254
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGITPWEDKLVEH 531
+G K VVM DA +D + F GQ C + + V+ + K +
Sbjct: 255 MLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPL 314
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFI 591
K +KV ++++ +GP +++E + + ++ + GA + G+ V G+E G +
Sbjct: 315 VKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWY 374
Query: 592 GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651
PT+L DV + E+ FGP+L ++ S+++AIE N + +G A + T S +
Sbjct: 375 EPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQ 434
Query: 652 FQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
++ VG+V IN + Q + F G+ DGK G+ Y + KTV
Sbjct: 435 AISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGE---DGKFGLEQYLEKKTV 484
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 218/498 (43%), Gaps = 21/498 (4%)
Query: 221 EPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLST--NXXXXXXXXXX 278
+P+ R PR IGG + + I ++NPAT+ I+ +P +T +
Sbjct: 13 DPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARK 72
Query: 279 XXXXXXWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVE 338
W +T R + + + LA + + GKTL ++ D+ E
Sbjct: 73 AIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFE 132
Query: 339 HACGVATLQIGEFVSNI---SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCG 395
+ G+A ++ + S+ +Y +REPLGV I +++P + +W A+ G
Sbjct: 133 YYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAG 192
Query: 396 NTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGP 454
ILKPSE LP+G LNI+ G V I+ G
Sbjct: 193 CAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGS 252
Query: 455 NSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA-SIDATLSALVAAGFGGAGQKCMALT 513
+ I + A+ K + +G K+ VV D ++D + F GQ C A +
Sbjct: 253 GPTGSKIMTAAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATS 312
Query: 514 TVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAK 572
++ I + + D+L++ K IK++ E + LGPV+S + E++ + I GA
Sbjct: 313 RLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGAT 372
Query: 573 LLLDGRNILVPGY-ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVN 631
+L G P + + G ++ PTI++DV +ME +KE+VFGPVL ++ ++AIE+ N
Sbjct: 373 ILCGGER---PQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELAN 429
Query: 632 RNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLF---TSSKPCFAGDLN 688
++G GA++ + +F G + IN QP F + F DL
Sbjct: 430 DTKYGLGAAVMSKDVKRCERFTKAFQTGIIWINCS---QPTFNELPWGGKKRSGFGRDL- 485
Query: 689 CDGKGGIHFYTQIKTVTQ 706
GK G+ + IK VT+
Sbjct: 486 --GKWGLENFLNIKQVTE 501
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 218/498 (43%), Gaps = 21/498 (4%)
Query: 221 EPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLST--NXXXXXXXXXX 278
+P+ R PR IGG + + I ++NPAT+ I+ +P +T +
Sbjct: 13 DPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARK 72
Query: 279 XXXXXXWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVE 338
W +T R + + + LA + + GKTL ++ D+ E
Sbjct: 73 AIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFE 132
Query: 339 HACGVATLQIGEFVSNI---SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCG 395
+ G+A ++ + S+ +Y +REPLGV I +++P + +W A+ G
Sbjct: 133 YYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAG 192
Query: 396 NTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGP 454
ILKPSE LP+G LNI+ G V I+ G
Sbjct: 193 CAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGS 252
Query: 455 NSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA-SIDATLSALVAAGFGGAGQKCMALT 513
+ I + A+ K + +G K+ VV D ++D + F GQ C A +
Sbjct: 253 GPTGSKIMTAAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATS 312
Query: 514 TVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAK 572
++ I + + D+L++ K IK++ E + LGPV+S + E++ + I GA
Sbjct: 313 RLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGAT 372
Query: 573 LLLDGRNILVPGY-ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVN 631
+L G P + + G ++ PTI++DV +ME +KE+VFGPVL ++ ++AIE+ N
Sbjct: 373 ILCGGER---PQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELAN 429
Query: 632 RNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLF---TSSKPCFAGDLN 688
++G GA++ + +F G + IN QP F + F DL
Sbjct: 430 DTKYGLGAAVMSKDVKRCERFTKAFQTGIIWINCS---QPTFNELPWGGKKRSGFGRDL- 485
Query: 689 CDGKGGIHFYTQIKTVTQ 706
GK G+ + IK VT+
Sbjct: 486 --GKWGLENFLNIKQVTE 501
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 208/484 (42%), Gaps = 14/484 (2%)
Query: 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNT 288
P + P I G+FV + IDVVNPAT+ ++S++P W
Sbjct: 4 PVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEAL 63
Query: 289 PVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQI 348
P R + K IR +++ I E GK A +V + +++ A
Sbjct: 64 PAIERASWLRKISAGIRERATEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYE 123
Query: 349 GEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPX 408
GE + + G + + LGV GI ++FP A+ GNT ++KPSE P
Sbjct: 124 GEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPN 183
Query: 409 XXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASA 467
LP GV N+V G V +++ G S I + A+
Sbjct: 184 NAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243
Query: 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWED 526
++ +G K A+VM DA ++ + A+V + +GQ C V GI + +
Sbjct: 244 NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVN 303
Query: 527 KLVEHAKAIKV-NAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY 585
+L E +A++ N ++ +GP+I+ ER+ + + E GA++ L G+ + GY
Sbjct: 304 RLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGY 363
Query: 586 ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645
+ PT+L DV M E+ FGPVL + ++++EAI + N + +G +SI+T +
Sbjct: 364 ----YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQN 419
Query: 646 AVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCF--AGDLNCDGKGGIHFYTQIKT 703
A K + G+ IN + F + +G DGK G+H Y Q +
Sbjct: 420 LNVAMKAIKGLKFGETYIN-----RENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQV 474
Query: 704 VTQQ 707
V Q
Sbjct: 475 VYLQ 478
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 207/484 (42%), Gaps = 14/484 (2%)
Query: 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNT 288
P + P I G+FV + IDVVNPAT+ ++S++P W
Sbjct: 4 PVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEAL 63
Query: 289 PVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQI 348
P R + K IR +++ I E GK A +V + +++ A
Sbjct: 64 PAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYE 123
Query: 349 GEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPX 408
GE + + G + + LGV GI ++FP A+ GNT ++KPSE P
Sbjct: 124 GEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPN 183
Query: 409 XXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASA 467
LP GV N+V G V +++ G S I + A+
Sbjct: 184 NAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243
Query: 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWED 526
++ +G K A+VM DA ++ + A+V + +GQ C V GI + +
Sbjct: 244 NITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVN 303
Query: 527 KLVEHAKAIKV-NAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY 585
+L E +A++ N ++ +GP+I+ ER+ + + E GA++ G+ + GY
Sbjct: 304 RLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGY 363
Query: 586 ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645
+ PT+L DV M E+ FGPVL + +++++AI + N + +G +SI+T +
Sbjct: 364 ----YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
Query: 646 AVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCF--AGDLNCDGKGGIHFYTQIKT 703
A K + G+ IN + F + +G DGK G+H Y Q +
Sbjct: 420 LNVAMKAIKGLKFGETYIN-----RENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQV 474
Query: 704 VTQQ 707
V Q
Sbjct: 475 VYLQ 478
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 211/483 (43%), Gaps = 21/483 (4%)
Query: 252 VNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX-----WRNTPVTNRQRIMFKFQELIRR 306
+NP+T+ I+ +P +T W + R R + I+
Sbjct: 28 INPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSAASGSLRARYLRAIAAKIKE 87
Query: 307 DMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDT---YS 363
D+L + + GK L +A D+ + E+ G+A + + IS +DT Y
Sbjct: 88 KKDELGKLESIDCGKPLEEALADLDDVVACFEYYAGLAEELDSKQKAPISLPMDTFKSYI 147
Query: 364 IREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXXXXLP 423
++EP+GV A I +++P + W A+ G ILKPSE LP
Sbjct: 148 LKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELASVTCLELGEICKEVGLP 207
Query: 424 NGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHA 482
GVLNIV G V I+ G ++ + I + A+ K + +G K+
Sbjct: 208 RGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAAQLVKPVSLELGGKSPI 267
Query: 483 VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLVEHAKAIKVNAGT 541
VV D +D V F GQ C A + ++ I + DKLV+ A+ IK++
Sbjct: 268 VVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHESIAVEFVDKLVKWAENIKISDPL 327
Query: 542 ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY-ENGNFIGPTILSDVT 600
E LGP++S+ + +++ I GA +L GR P + + G F+ PTI++DVT
Sbjct: 328 EEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRR---PEHLKKGYFVEPTIITDVT 384
Query: 601 VNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQ 660
+M+ ++E+VFGPVL + +EAI + N +G G+++ + + + G
Sbjct: 385 TSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDLERCERLSKALQAGI 444
Query: 661 VGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVETP 718
V IN P +Q P+ S F +L G+ G+ Y +K VT+ D P P
Sbjct: 445 VWINCAQPSFIQAPWGGIKRSG--FGREL---GEWGLENYLSVKQVTRYTSDEPWGWYQP 499
Query: 719 TSN 721
S
Sbjct: 500 PSK 502
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 207/484 (42%), Gaps = 14/484 (2%)
Query: 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNT 288
P + P I G+FV + IDVVNPAT+ ++S++P W
Sbjct: 4 PVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEAL 63
Query: 289 PVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQI 348
P R + K IR +++ I E GK A +V + +++ A
Sbjct: 64 PAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYE 123
Query: 349 GEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPX 408
GE + + G + + LGV GI ++FP A+ GNT ++KPSE P
Sbjct: 124 GEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPN 183
Query: 409 XXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASA 467
LP GV N+V G V +++ G S I + A+
Sbjct: 184 NAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243
Query: 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWED 526
++ +G K A+VM DA ++ + A+V + +GQ C V GI + +
Sbjct: 244 NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVN 303
Query: 527 KLVEHAKAIKV-NAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY 585
+L E +A++ N ++ +GP+I+ ER+ + + E GA++ G+ + GY
Sbjct: 304 RLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGY 363
Query: 586 ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645
+ PT+L DV M E+ FGPVL + +++++AI + N + +G +SI+T +
Sbjct: 364 ----YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
Query: 646 AVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCF--AGDLNCDGKGGIHFYTQIKT 703
A K + G+ IN + F + +G DGK G+H Y Q +
Sbjct: 420 LNVAMKAIKGLKFGETYIN-----RENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQV 474
Query: 704 VTQQ 707
V Q
Sbjct: 475 VYLQ 478
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 209/485 (43%), Gaps = 22/485 (4%)
Query: 249 IDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX-----WRNTPVTNRQRIMFKFQEL 303
+ VVNP T+ + ++P T W P R + +
Sbjct: 42 LPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGRDWARAPGAVRAKYLRAIAAK 101
Query: 304 IRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYS 363
+ +LA + GK +A D+ E+ A S +S ++T+
Sbjct: 102 VIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQAEALDKRQNSPVSLPMETFK 161
Query: 364 I---REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXXX 420
REP+GV I +++P + W A+ G T +LKPSE
Sbjct: 162 CHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLELADICKEV 221
Query: 421 XLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAK 479
LP+GVLNIV G V +A G I + A+ K + +G K
Sbjct: 222 GLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMASAAPMVKPVTLELGGK 281
Query: 480 NHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP-WEDKLVEHAKAIKVN 538
+ VV D ID + + F GQ C A + ++ I + +++V AK IKV+
Sbjct: 282 SPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHTKIAKKFNERMVAWAKNIKVS 341
Query: 539 AGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY-ENGNFIGPTILS 597
E LGPV+S+ + E++ + I GA +L G + P + E G FI PTI++
Sbjct: 342 DPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGG---VRPAHLEKGFFIEPTIIT 398
Query: 598 DVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIA 657
D+T +ME ++E+VFGPVL + + DEAIE+ N ++G ++ + ++ EI
Sbjct: 399 DITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEID 458
Query: 658 VGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLP-GN 714
G + +N P Q P+ + + F +L G+GGI Y +K VT+ D P G
Sbjct: 459 AGCIWVNCSQPCFCQAPWG--GNKRSGFGREL---GEGGIDNYLSVKQVTEYISDEPWGW 513
Query: 715 VETPT 719
++P+
Sbjct: 514 YQSPS 518
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 212/498 (42%), Gaps = 30/498 (6%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX---WRNTPVT 291
I + D+ S + VNP+T ++ QV WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGE 350
+R R++ + +LI RD LA T ++GK +Y D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+ I +Y+ EP+GVC I ++FP + W A+ GN ++K +E+ P
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKG 469
P GV+NIV G V +A G ++++ + A+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG-STEIGRVIQVAAGSS 260
Query: 470 --KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT-TVVYVGGITPWED 526
KR+ +G K+ ++M DA +D + A F GQ C A + T V + +
Sbjct: 261 NLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFVE 320
Query: 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
+ V AK+ V +S + GP + + + +++ I + GAKLL G GY
Sbjct: 321 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY- 379
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
FI PT+ DV M KE++FGPV+ ++ ++I+E + N + +G A++FT
Sbjct: 380 ---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 647 VAARKFQIEIAVGQVGINVP--ISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
A + G V +N Q PF + S G G+ G+ YT++KTV
Sbjct: 437 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMS-----GSGRELGEYGLQAYTEVKTV 491
Query: 705 TQQWKDLPGNVETPTSNS 722
T V+ P NS
Sbjct: 492 T---------VKVPQKNS 500
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 213/498 (42%), Gaps = 30/498 (6%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX---WRNTPVT 291
I + D+ S + VNP+T ++ QV WR +
Sbjct: 17 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 76
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGE 350
+R R++ + +LI RD LA T ++GK +Y D+ L+ + + G A G+
Sbjct: 77 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 136
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+ I +Y+ EP+GVC I ++FP + W A+ GN ++K +E+ P
Sbjct: 137 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 195
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGPNSDVADIYSRA--SA 467
P GV+NIV G V +A G ++++ + A S+
Sbjct: 196 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG-STEIGRVIQVAAGSS 254
Query: 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT-TVVYVGGITPWED 526
KR+ +G K+ ++M DA +D + A F GQ C A + T V + +
Sbjct: 255 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVE 314
Query: 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
+ V AK+ V +S + GP + + + +++ I + GAKLL G GY
Sbjct: 315 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY- 373
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
FI PT+ DV M KE++FGPV+ ++ ++I+E + N + +G A++FT
Sbjct: 374 ---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 430
Query: 647 VAARKFQIEIAVGQVGINVP--ISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
A + G V +N Q PF + S G G+ G+ YT++KTV
Sbjct: 431 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMS-----GSGRELGEYGLQAYTEVKTV 485
Query: 705 TQQWKDLPGNVETPTSNS 722
T V+ P NS
Sbjct: 486 T---------VKVPQKNS 494
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 212/498 (42%), Gaps = 30/498 (6%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX---WRNTPVT 291
I + D+ S + VNP+T ++ QV WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGE 350
+R R++ + +LI RD LA T ++GK +Y D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+ I +Y+ EP+GVC I ++FP + W A+ GN ++K +E+ P
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKG 469
P GV+NIV G V +A G ++++ + A+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG-STEIGRVIQVAAGSS 260
Query: 470 --KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT-TVVYVGGITPWED 526
KR+ +G K+ ++M DA +D + A F GQ C A + T V + +
Sbjct: 261 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVE 320
Query: 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
+ V AK+ V +S + GP + + + +++ I + GAKLL G GY
Sbjct: 321 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY- 379
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
FI PT+ DV M KE++FGPV+ ++ ++I+E + N + +G A++FT
Sbjct: 380 ---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 647 VAARKFQIEIAVGQVGINVP--ISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
A + G V +N Q PF + S G G+ G+ YT++KTV
Sbjct: 437 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMS-----GSGQELGEYGLQAYTEVKTV 491
Query: 705 TQQWKDLPGNVETPTSNS 722
T V+ P NS
Sbjct: 492 T---------VKVPQKNS 500
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 212/498 (42%), Gaps = 30/498 (6%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX---WRNTPVT 291
I + D+ S + VNP+T ++ QV WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGE 350
+R R++ + +LI RD LA T ++GK +Y D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+ I +Y+ EP+GVC I ++FP + W A+ GN ++K +E+ P
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKG 469
P GV+NIV G V +A G ++++ + A+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAG-STEIGRVIQVAAGSS 260
Query: 470 --KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT-TVVYVGGITPWED 526
KR+ +G K+ ++M DA +D + A F GQ C A + T V + +
Sbjct: 261 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVE 320
Query: 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
+ V AK+ V +S + GP + + + +++ I + GAKLL G GY
Sbjct: 321 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY- 379
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
FI PT+ DV M KE++FGPV+ ++ ++I+E + N + +G A++FT
Sbjct: 380 ---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 647 VAARKFQIEIAVGQVGINVP--ISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
A + G V +N Q PF + S G G+ G+ YT++KTV
Sbjct: 437 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMS-----GSGRELGEYGLQAYTEVKTV 491
Query: 705 TQQWKDLPGNVETPTSNS 722
T V+ P NS
Sbjct: 492 T---------VKVPQKNS 500
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 212/498 (42%), Gaps = 30/498 (6%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX---WRNTPVT 291
I + D+ S + VNP+T ++ QV WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGE 350
+R R++ + +LI RD LA T ++GK +Y D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+ I +Y+ EP+GVC I ++FP + W A+ GN ++K +E+ P
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKG 469
P GV+NIV G V +A G ++++ + A+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG-STEIGRVIQVAAGSS 260
Query: 470 --KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT-TVVYVGGITPWED 526
KR+ +G K+ ++M DA +D + A F GQ C A + T V + +
Sbjct: 261 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVE 320
Query: 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
+ V AK+ V +S + GP + + + +++ I + GAKLL G GY
Sbjct: 321 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY- 379
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
FI PT+ DV M KE++FGPV+ ++ ++I+E + N + +G A++FT
Sbjct: 380 ---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 647 VAARKFQIEIAVGQVGINVP--ISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
A + G V +N Q PF + S G G+ G+ YT++KTV
Sbjct: 437 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMS-----GSGRELGEYGLQAYTEVKTV 491
Query: 705 TQQWKDLPGNVETPTSNS 722
T V+ P NS
Sbjct: 492 T---------VKVPQKNS 500
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 207/481 (43%), Gaps = 21/481 (4%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX---WRNTPVT 291
I + D+ S + VNP+T ++ V WR +
Sbjct: 22 FINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRMDAS 81
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGE 350
R R++ + +LI RD LA T ++GK +Y D+ L+ + + G A G+
Sbjct: 82 ERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGK 141
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+ I +Y+ EP+GVC I ++FP + W A+ GN ++K +E+ P
Sbjct: 142 TIP-IDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 200
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKG 469
P GV+N++ G V +A G +++V + A+ K
Sbjct: 201 LYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTG-STEVGHLIQVAAGKS 259
Query: 470 --KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT-TVVYVGGITPWED 526
KR+ IG K+ ++M DA +D + A F GQ C A + T V + +
Sbjct: 260 NLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVE 319
Query: 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
+ V AK+ V +S + GP + + + +++ I+ E G KLL G GY
Sbjct: 320 RSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAADRGY- 378
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
FI PT+ D+ M KE++FGPV+ ++ +S++E + N +++G A++FT
Sbjct: 379 ---FIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDL 435
Query: 647 VAARKFQIEIAVGQVGINVP--ISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
A + G V +N Q PF + S G G+ G+ YT++KTV
Sbjct: 436 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLS-----GSGRELGEYGLQAYTEVKTV 490
Query: 705 T 705
T
Sbjct: 491 T 491
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 197/450 (43%), Gaps = 6/450 (1%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLST--NXXXXXXXXXXXXXXXXWRNTPVTNR 293
I G +V+S + + D++NP Q ++ V T + W R
Sbjct: 37 IDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETR 96
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
+ + + I+ + LA T + GKTL ++Y D+ + + G+A GE +
Sbjct: 97 GKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMID 156
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXX 413
+ ++ ++EP+GV I +++P + W A+ G + ++KPSE P
Sbjct: 157 SPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRV 216
Query: 414 XXXXXXXXLPNGVLNIVHGTXXXXXXXXX-XXXVKAIALVGPNSDVADIYSRASAKGKRI 472
P G +N++ G V ++ G I A+ I
Sbjct: 217 FELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNI 276
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLVEH 531
+G KN ++ DA + + + G+ AGQ C A + ++ I +E L++
Sbjct: 277 ALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDR 336
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFI 591
K IK+ G +++ ++GPVIS + + ++ + V GA + + G+ ++G F
Sbjct: 337 VKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFF 396
Query: 592 GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651
PT++++ +M +E+VFGPV+ E+ EAI++ N + +G ++F+ A++
Sbjct: 397 EPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQR 456
Query: 652 FQIEIAVGQVGINV--PISVQPPFTLFTSS 679
++ +G V IN P Q P+ + S
Sbjct: 457 VANKLKLGTVWINDFHPYFAQAPWGGYKQS 486
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 210/498 (42%), Gaps = 30/498 (6%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX---WRNTPVT 291
I + D+ S + VNP+T ++ QV WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGE 350
+R R++ + +LI RD LA T ++GK +Y D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+ I +Y+ EP+GVC I ++FP + W A+ GN ++K +E+ P
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKG 469
P GV+NIV G V +A G ++++ + A+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG-STEIGRVIQVAAGSS 260
Query: 470 --KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQ-KCMALTTVVYVGGITPWED 526
KR+ +G K+ ++M DA +D + A F GQ C T V + +
Sbjct: 261 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVE 320
Query: 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
+ V AK+ V +S + GP + + + +++ I + GAKLL G GY
Sbjct: 321 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY- 379
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
FI PT+ DV M KE++FGPV+ ++ ++I+E + N + +G A++FT
Sbjct: 380 ---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 647 VAARKFQIEIAVGQVGINVP--ISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
A + G V +N Q PF + S G G+ G+ YT++KTV
Sbjct: 437 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMS-----GSGRELGEYGLQAYTEVKTV 491
Query: 705 TQQWKDLPGNVETPTSNS 722
T V+ P NS
Sbjct: 492 T---------VKVPQKNS 500
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 210/498 (42%), Gaps = 30/498 (6%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX---WRNTPVT 291
I + D+ S + VNP+T ++ QV WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGE 350
+R R++ + +LI RD LA T ++GK +Y D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+ I +Y+ EP+GVC I ++FP + W A+ GN ++K +E+ P
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKG 469
P GV+NIV G V +A G ++++ + A+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG-STEIGRVIQVAAGSS 260
Query: 470 --KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQ-KCMALTTVVYVGGITPWED 526
KR+ +G K+ ++M DA +D + A F GQ C T V + +
Sbjct: 261 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQEDIYDEFVE 320
Query: 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
+ V AK+ V +S + GP + + + +++ I + GAKLL G GY
Sbjct: 321 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY- 379
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
FI PT+ DV M KE++FGPV+ ++ ++I+E + N + +G A++FT
Sbjct: 380 ---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 647 VAARKFQIEIAVGQVGINVP--ISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
A + G V +N Q PF + S G G+ G+ YT++KTV
Sbjct: 437 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMS-----GSGRELGEYGLQAYTEVKTV 491
Query: 705 TQQWKDLPGNVETPTSNS 722
T V+ P NS
Sbjct: 492 T---------VKVPQKNS 500
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 203/481 (42%), Gaps = 15/481 (3%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTP 289
P+ + I G +V+ + T + + PAT +++++ +T W
Sbjct: 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMS 72
Query: 290 VTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQI 348
R RI+ + +++R D L+ T + GK + + D G + E G+A +
Sbjct: 73 PMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSAL 132
Query: 349 -GEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVP 407
G+++ G Y+ R PLGVC GI ++++P W A+ GN + KPSE P
Sbjct: 133 NGDYIP--LGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTP 190
Query: 408 XXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRASA 467
LP G+ N++ G V ++L G + + A+
Sbjct: 191 LGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAG 250
Query: 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGITPWED 526
K + +G K+ +V DA I++ + + F +GQ C T V V + +
Sbjct: 251 HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLE 310
Query: 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDG---RNILVP 583
L +A+ + + LGP++SK ++E++ I+ GA L+ G N+
Sbjct: 311 NLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVA-- 368
Query: 584 GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
G ++ PT+ +DVT +M +E++FGPV+ + + DE + N G +FT
Sbjct: 369 --GEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFT 426
Query: 644 TSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKT 703
A + + G + IN ++ P F SK G N + Y+++KT
Sbjct: 427 ADLARAHRVVDGLEAGTLWINT-YNLCPVEIPFGGSKQSGFGRENS--AAALEHYSELKT 483
Query: 704 V 704
V
Sbjct: 484 V 484
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 205/483 (42%), Gaps = 21/483 (4%)
Query: 249 IDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXX-----XXWRNTPVTNRQRIMFKFQEL 303
I V+NPATQ I+ +P +T W R R +
Sbjct: 25 IPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84
Query: 304 IRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYS 363
+ +LA + + GK L +A D+ E+ +A + +S +DT+
Sbjct: 85 VTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFK 144
Query: 364 ---IREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXXX 420
+REP+GV I +++P + W A+ G ILKPSE
Sbjct: 145 SHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEV 204
Query: 421 XLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAK 479
LP GVLNI+ G V +A G ++ + I + A+ K + +G K
Sbjct: 205 GLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGK 264
Query: 480 NHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVN 538
+ VV D +D + F GQ C A + ++ I T + +++V+ K IK++
Sbjct: 265 SPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKIS 324
Query: 539 AGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY-ENGNFIGPTILS 597
E LGPV+S+ + E++ + + GA +L G P + + G FI PTI++
Sbjct: 325 DPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSR---PEHLKKGFFIEPTIIT 381
Query: 598 DVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIA 657
DVT NM+ ++E+VFGPVL + +EAI++ N +G GA++ + +
Sbjct: 382 DVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFK 441
Query: 658 VGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNV 715
G V +N P Q P+ S F +L G+ G+ Y +K VTQ + P
Sbjct: 442 AGIVWVNCSQPCFTQAPWGGVKRSG--FGREL---GEWGLDNYLSVKQVTQYISEEPWGW 496
Query: 716 ETP 718
P
Sbjct: 497 YQP 499
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 194/455 (42%), Gaps = 16/455 (3%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX---WRNTPVT 291
I + D+ S + VNP+T ++ QV WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGE 350
+R R++ + +LI RD LA T ++GK +Y D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+ I +Y+ EP+GVC I ++FP + W A+ GN ++K +E+ P
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKG 469
P GV+NIV G V +A G ++++ + A+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG-STEIGRVIQVAAGSS 260
Query: 470 --KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT-TVVYVGGITPWED 526
KR+ +G K+ ++M DA +D + A F GQ C A + T V + +
Sbjct: 261 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVE 320
Query: 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
+ V AK+ V +S + GP + + + +++ I + GAKLL G GY
Sbjct: 321 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY- 379
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
FI PT+ DV M KE++FGPV+ ++ ++I+E + N + +G A++FT
Sbjct: 380 ---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 647 VAARKFQIEIAVGQVGINVP--ISVQPPFTLFTSS 679
A + G V +N Q PF + S
Sbjct: 437 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMS 471
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 202/482 (41%), Gaps = 21/482 (4%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQ 294
L+ GR++D+ T+I V NPA ++ VP + W R
Sbjct: 36 LVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERA 95
Query: 295 RIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSN 354
I+ K+ +LI + D +A+ +TSE GK L +A +VL +E A G+ +
Sbjct: 96 GILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPA 155
Query: 355 ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXX 414
NG IR+P+GV A I ++FPA A+ G T I++P++ P
Sbjct: 156 PQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALG 215
Query: 415 XXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASAKGKRIQ 473
+P GVL IV G V+ ++ G + ++ + KRI
Sbjct: 216 VLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRIS 275
Query: 474 CNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLVEHA 532
+G +V DA +DA + + + + AGQ C+ + G+ + +KL
Sbjct: 276 LELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKV 335
Query: 533 KAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIG 592
K +KV GTE +GP+I ++ ++ I+ GAKL+ G+ + G F
Sbjct: 336 KELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL------GGLFFE 389
Query: 593 PTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKF 652
P IL+ VT +M KE+ FGP+ ++ +E I N G A +T + A +
Sbjct: 390 PGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRV 449
Query: 653 QIEIAVGQVGINVPISVQPPFTLFTSSKPCFAG----DLNCDG-KGGIHFYTQIKTVTQQ 707
+ G VG N L ++ F G L +G K GI Y + K +
Sbjct: 450 SEALEYGMVGHNT--------GLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA 501
Query: 708 WK 709
+K
Sbjct: 502 YK 503
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 192/455 (42%), Gaps = 16/455 (3%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX---WRNTPVT 291
I + D+ S + VNP+T ++ QV WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGE 350
+R R++ + +LI RD LA T ++GK +Y D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+ I +Y+ EP+GVC I ++FP + W A+ GN ++K +E+ P
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKG 469
P GV+NIV G V +A G ++++ + A+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG-STEIGRVIQVAAGSS 260
Query: 470 --KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQ-KCMALTTVVYVGGITPWED 526
KR+ +G K+ ++M DA +D + A F GQ C T V + +
Sbjct: 261 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVE 320
Query: 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
+ V AK+ V +S + GP + + + +++ I + GAKLL G GY
Sbjct: 321 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY- 379
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
FI PT+ DV M KE++FGPV+ ++ ++I+E + N + +G A++FT
Sbjct: 380 ---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 647 VAARKFQIEIAVGQVGINVP--ISVQPPFTLFTSS 679
A + G V +N Q PF + S
Sbjct: 437 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMS 471
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 211/488 (43%), Gaps = 17/488 (3%)
Query: 225 RQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLST--NXXXXXXXXXXXXX 281
R R R L+ G+ VD+ S ++ID V+P +V P ++ +
Sbjct: 16 RLRIKSRYQXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFD 75
Query: 282 XXXWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHAC 341
W R R+ FK +LI ++LA+ + E GK + A ++ ++ +A
Sbjct: 76 AGPWPRXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAA 135
Query: 342 GVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILK 401
G A G+ +NI + +REP+GV I ++FP + P A+ G T +LK
Sbjct: 136 GQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLK 195
Query: 402 PSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXX-XXXXXXXXXXVKAIALVGP---NSD 457
PSE +P+GV N+V G V +A G +
Sbjct: 196 PSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTK 255
Query: 458 VADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVY 517
+ +I +R KR+ +G K +V DA +DA + + AGQ C++ + ++
Sbjct: 256 LGEIAARTV---KRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLV 312
Query: 518 VGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLD 576
GI ++L++ ++ + +G IS+ E++ + SGA+LLL
Sbjct: 313 QEGIRDALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLG 372
Query: 577 GRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHG 636
G I G E G + PT+ + VT + +E++FGPVL + ++ DEA+ + N G
Sbjct: 373 GERI---GREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFG 429
Query: 637 SGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIH 696
AS+++T+ A + I G+ IN I P + K +L G+ G
Sbjct: 430 LSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGREL---GRYGFD 486
Query: 697 FYTQIKTV 704
Y+Q K V
Sbjct: 487 EYSQFKGV 494
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 202/491 (41%), Gaps = 28/491 (5%)
Query: 233 PNLIGGRFVDSKS-LTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVT 291
P IGG +VD+K + S++ P+ +V + W++ P
Sbjct: 39 PLYIGGEWVDTKERMVSLNPSAPSE--VVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQE 96
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEF 351
+R R++ K L+RR +L + E GK +A DV ++ +E+ A
Sbjct: 97 DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPA 156
Query: 352 VSNISN-GVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
V + G D S PLG I ++FP M V GNT I KP+E
Sbjct: 157 VEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVG 216
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRAS--A 467
P GV+N + G ++ I G IY A A
Sbjct: 217 AKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA 276
Query: 468 KG----KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGIT 522
G KR G KN +V A D +V + +G GQKC A + ++ G
Sbjct: 277 PGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYE 336
Query: 523 PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
P +++++ A+ + V E N DLGPV+S +++ ++ I++ G +L+L G+ +
Sbjct: 337 PVLERVLKRAERLSVGP-AEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEG 394
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642
GY FI PT+ ++V +E++FGPVL ++ + EA+E+ N +G ++
Sbjct: 395 EGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVY 450
Query: 643 TTSAVAARKFQIEIAVGQVGINVPIS-----VQPPFTLFTSSKPCFAGDLNCDGKGGIHF 697
+ + E VG + N I+ VQP S G L+ +
Sbjct: 451 SRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDY-----LRL 505
Query: 698 YTQIKTVTQQW 708
+ ++K V +++
Sbjct: 506 FLEMKAVAERF 516
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 202/491 (41%), Gaps = 28/491 (5%)
Query: 233 PNLIGGRFVDSKS-LTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVT 291
P IGG +VD+K + S++ P+ +V + W++ P
Sbjct: 39 PLYIGGEWVDTKERMVSLNPSAPSE--VVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQE 96
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEF 351
+R R++ K L+RR +L + E GK +A DV ++ +E+ A
Sbjct: 97 DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPA 156
Query: 352 VSNISN-GVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
V + G D S PLG I ++FP M V GNT I KP+E
Sbjct: 157 VEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVG 216
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRAS--A 467
P GV+N + G ++ I G IY A A
Sbjct: 217 AKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA 276
Query: 468 KG----KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGIT 522
G KR G K+ +V A D +V + +G GQKC A + ++ G
Sbjct: 277 PGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYE 336
Query: 523 PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
P +++++ A+ + V E N DLGPV+S +++ ++ I++ G +L+L G+ +
Sbjct: 337 PVLERVLKRAERLSVGP-AEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEG 394
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642
GY FI PT+ ++V +E++FGPVL ++ + EA+E+ N +G ++
Sbjct: 395 EGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVY 450
Query: 643 TTSAVAARKFQIEIAVGQVGINVPIS-----VQPPFTLFTSSKPCFAGDLNCDGKGGIHF 697
+ + E VG + N I+ VQP S G L+ +
Sbjct: 451 SRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDY-----LRL 505
Query: 698 YTQIKTVTQQW 708
+ ++K V +++
Sbjct: 506 FLEMKAVAERF 516
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 183/432 (42%), Gaps = 8/432 (1%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQR 295
IGG + + S + +V +PAT + VP WR R
Sbjct: 17 IGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAA 76
Query: 296 IMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNI 355
I+ ++ +L+ + D LA+ +T+E GK L +A ++ +E G+ +
Sbjct: 77 ILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTP 136
Query: 356 SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXX 415
++EP+GVCA I ++FPA A+ G ++KP+E P
Sbjct: 137 DANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAF 196
Query: 416 XXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASAKGKRIQC 474
+P GVL++V G V+ ++ G + + ++++ K++
Sbjct: 197 LAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTL 256
Query: 475 NIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGITPWEDKLVEHAK 533
+G +V DA +DA + +A+ + GQ C+ V+ + DKL
Sbjct: 257 ELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVS 316
Query: 534 AIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDG-RNILVPGYENGNFIG 592
+KV GTES A LGP+I++ +++ I GA L+ G R+ L G F
Sbjct: 317 KLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHG-----FFE 371
Query: 593 PTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKF 652
PT+L+ V +M+ KE+ FGP+ + S +E + + N G A +++ +
Sbjct: 372 PTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRV 431
Query: 653 QIEIAVGQVGIN 664
+ G VGIN
Sbjct: 432 AEALEYGMVGIN 443
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 191/459 (41%), Gaps = 25/459 (5%)
Query: 238 GRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQRIM 297
G +V+S++ I + PA+ + + +P + W+ P+ R ++
Sbjct: 18 GEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLL 77
Query: 298 FKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVA------TLQIGEF 351
+ + +L+ + + I E K A +V R +I+ H A TL+ +F
Sbjct: 78 YAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQF 137
Query: 352 VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXX 411
S + REPLGV I F++P A+ GNT + KP+ +
Sbjct: 138 KGGSSKKIALVE-REPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGI 196
Query: 412 XXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKGKR 471
P G++ +V G I ++ + R S K K
Sbjct: 197 KMVEALADAGAPEGIIQVVTGRGSVIGDHLVEH--PGIDMI-TFTGGTTTGERISEKAKM 253
Query: 472 IQC--NIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLV 529
I +G K+ A+V+ DA + T S +V+ F +GQ+C A+ V + D+LV
Sbjct: 254 IPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVA---DQLV 310
Query: 530 EHAKAI--KVNAGT-ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
+ K + ++ G+ E +AD+ PVI ++ + LI E+GA LL +
Sbjct: 311 ANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR------- 363
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
GN + PT+L DVT M E+ FGPVL ++ + +EAI + N++ +G ASIFT
Sbjct: 364 QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDT 423
Query: 647 VAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAG 685
A + VG V IN P F K G
Sbjct: 424 DRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLG 462
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 201/491 (40%), Gaps = 28/491 (5%)
Query: 233 PNLIGGRFVDSKS-LTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVT 291
P IGG +VD+K + S++ P+ +V + W++ P
Sbjct: 39 PLYIGGEWVDTKERMVSLNPSAPSE--VVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQE 96
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEF 351
+R R++ K L+RR +L + E GK +A DV ++ +E+ A
Sbjct: 97 DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPA 156
Query: 352 VSNISN-GVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
V + G D S PLG I ++FP M V GNT I KP+E
Sbjct: 157 VEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVG 216
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRAS--A 467
P GV+N + G ++ I G IY A A
Sbjct: 217 AKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA 276
Query: 468 KG----KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGIT 522
G KR G K+ +V A D +V + +G GQK A + ++ G
Sbjct: 277 PGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYE 336
Query: 523 PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
P +++++ A+ + V E N DLGPV+S +++ ++ I++ G +L+L G+ +
Sbjct: 337 PVLERVLKRAERLSVGP-AEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEG 394
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642
GY FI PT+ ++V +E++FGPVL ++ + EA+E+ N +G ++
Sbjct: 395 EGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVY 450
Query: 643 TTSAVAARKFQIEIAVGQVGINVPIS-----VQPPFTLFTSSKPCFAGDLNCDGKGGIHF 697
+ + E VG + N I+ VQP S G L+ +
Sbjct: 451 SRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDY-----LRL 505
Query: 698 YTQIKTVTQQW 708
+ ++K V +++
Sbjct: 506 FLEMKAVAERF 516
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 206/485 (42%), Gaps = 33/485 (6%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXX--WRNTPVTN 292
IGG++ + I+V PAT V +VP++ W +TP
Sbjct: 12 FIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHE 71
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGK--TLTDAYNDVLRGLEIVEHACGVATLQIGE 350
R ++ +++ D + +E G+ T+ + + + + + + G A
Sbjct: 72 RAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMH-WMGSMGAMNYFAGAADKVTWT 130
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
S G S REP+GV I +++ P + A+ G T +LKP+ + P
Sbjct: 131 ETRTGSYGQSIVS-REPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTA 189
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKGK 470
LP GVL++V G + G ++ ++ RA+ K
Sbjct: 190 NALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLK 249
Query: 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWE--DKL 528
+G K+ A+++ D + A + +V +G AGQ C+ T + + P D++
Sbjct: 250 PCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRI-----LAPRSRYDEI 304
Query: 529 V----EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPG 584
V A+ V ++ A +GP+IS++++ R+ I E GA+L+ G G
Sbjct: 305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGR--PEG 362
Query: 585 YENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTT 644
+NG FI PT+ +DV M +E++FGPVL + ++ ++AI I N + +G S++TT
Sbjct: 363 LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTT 422
Query: 645 SAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNC-----DGKGGIHFYT 699
K +I G GIN + F P F G N +G G+ +T
Sbjct: 423 DVPKGIKISQQIRTGTYGIN--------WYAFDPGSP-FGGYKNSGIGRENGPEGVEHFT 473
Query: 700 QIKTV 704
Q K+V
Sbjct: 474 QQKSV 478
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 193/478 (40%), Gaps = 17/478 (3%)
Query: 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPV 290
R LI G ++D+ + +IDV NPA + VP WR
Sbjct: 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTA 68
Query: 291 TNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE 350
R I+ + L+ D LA +T E GK L +A ++ +E G+
Sbjct: 69 KERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGD 128
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+ I++P+GV A I ++FPA A+ G T +LKP+ + P
Sbjct: 129 TIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA 188
Query: 411 XXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRASAKG 469
+P GV N+V G+ V+ ++ G + + +
Sbjct: 189 LALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 248
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP-WEDKL 528
K++ +G +V DA +D + +A+ F AGQ C+ + G+ + +KL
Sbjct: 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 308
Query: 529 VEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENG 588
+ + + G ++ +GP+I ++ ++ I E GA+++ G+ G
Sbjct: 309 QQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK----AHERGG 364
Query: 589 NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648
NF PTIL DV N + KE+ FGP+ + + DEA I N G + + +
Sbjct: 365 NFFQPTILVDVPANAKVSKEETFGPLAPLFRFK--DEADVIAQANDTEFGLAAYFYARDL 422
Query: 649 ARKFQIEIAV--GQVGINVPISVQ--PPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIK 702
+R F++ A+ G VGIN I PF +S G K GI Y +IK
Sbjct: 423 SRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGS-----KYGIEDYLEIK 475
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 195/481 (40%), Gaps = 17/481 (3%)
Query: 228 NPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRN 287
N R LI G ++D+ + +IDV NPA + VP WR
Sbjct: 6 NLFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRA 65
Query: 288 TPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQ 347
R I+ + L+ D LA +T E GK L +A ++ +E
Sbjct: 66 LTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRI 125
Query: 348 IGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVP 407
G+ + I++P+GV A I ++FPA A+ G T +LKP+ + P
Sbjct: 126 YGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTP 185
Query: 408 XXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRAS 466
+P GV N+V G+ V+ ++ G + + +
Sbjct: 186 FSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245
Query: 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP-WE 525
K++ +G +V DA +D + +A+ F AGQ C+ + G+ +
Sbjct: 246 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFA 305
Query: 526 DKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY 585
+KL + + + G ++ +GP+I ++ ++ I E GA+++ G+
Sbjct: 306 EKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK----AHE 361
Query: 586 ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645
GNF PTIL DV N + KE+ FGP+ + + DEA I N G + + +
Sbjct: 362 RGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFK--DEADVIAQANDTEFGLAAYFYA 419
Query: 646 AVAARKFQIEIAV--GQVGINVPI--SVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQI 701
+R F++ A+ G VGIN I + PF +S G K GI Y +I
Sbjct: 420 RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGS-----KYGIEDYLEI 474
Query: 702 K 702
K
Sbjct: 475 K 475
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 177/441 (40%), Gaps = 27/441 (6%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQR 295
I G +V+S S +I+V+NPAT+ ++ +V +R+T V RQ
Sbjct: 12 INGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQA 71
Query: 296 IMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNI 355
++ K + D + IT E G L+ + E V + G + FV+
Sbjct: 72 LLDKIVKEYENRKDDIVQAITDELGAPLSLS--------ERVHYQXG-----LNHFVA-A 117
Query: 356 SNGVDTYS----------IREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEK 405
+ +D Y ++E +GV I ++FP A G+ +LKPSE+
Sbjct: 118 RDALDNYEFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEE 177
Query: 406 VPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSR 464
P +P GV N+V+G V+ + G + I +
Sbjct: 178 TPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEK 237
Query: 465 ASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-P 523
A+ K++ +G K+ +V+ D I A GQ C A T V+ I
Sbjct: 238 AAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDA 297
Query: 524 WEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP 583
+ +L E ++V E +GP+ISK++ +++ I E GA+L G
Sbjct: 298 FLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPG-KPE 356
Query: 584 GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
G E G F PTI +V +E++FGPV + +DEAI+I N ++G +
Sbjct: 357 GLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIG 416
Query: 644 TSAVAARKFQIEIAVGQVGIN 664
K I G V IN
Sbjct: 417 KDKETLHKVARSIEAGTVEIN 437
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 177/430 (41%), Gaps = 23/430 (5%)
Query: 245 SLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQRIMFKFQELI 304
S I + PA+ + VP + WR R + K +++
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 305 RRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNIS-NGVDTYS 363
RD +K+ ++ E K A ++V+R EI+ +A GE + S
Sbjct: 76 MRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKK 135
Query: 364 I----REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXX 419
I REP+G+ I F++P A+ GN KP +
Sbjct: 136 IAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE 195
Query: 420 XXLPNGVLNIVHGTXXXXXXXXXX-XXVKAIALVGPNSDVADIYSRASAKGKR-IQCNIG 477
LP GV N + G V I G I A G R I +G
Sbjct: 196 AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA---GMRPIMLELG 252
Query: 478 AKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVE--HAKAI 535
K+ A+V+ DA ++ T ++A FG +GQ+C A+ V+ + + D+LVE K +
Sbjct: 253 GKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVA---DELVEKIREKVL 309
Query: 536 KVNAGT-ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPT 594
+ G E +AD+ P+I + + + LI + GA L + + GN I P
Sbjct: 310 ALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPI 362
Query: 595 ILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQI 654
+ VT +M E+ FGPVL ++ S++EAIEI N++ +G ASIFT A
Sbjct: 363 LFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAE 422
Query: 655 EIAVGQVGIN 664
++ VG V IN
Sbjct: 423 QLEVGTVHIN 432
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 190/448 (42%), Gaps = 38/448 (8%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQR 295
I G + D + + V++P+T+ + + L + W+ T R
Sbjct: 30 INGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLG 89
Query: 296 IMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNI 355
+ K E+ + +A I+ E G + A N + A G + ++ N
Sbjct: 90 FVEKILEIYEKRSSDMAKTISMEMGAPIDMALN--------AQTATGSSHIR------NF 135
Query: 356 SNGVDTYSIREPL--GVCAGICSFDFPAMTPL---WMFPI---------AVTCGNTFILK 401
+S +E L G I +D + L W +P+ A+ G T +LK
Sbjct: 136 IKAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLK 195
Query: 402 PSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVAD 460
PSE P LP+GV N+++G ++ I+ G D
Sbjct: 196 PSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKD 255
Query: 461 IYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGG 520
I AS KR+ +G K ++ DA IDA L V F +GQ C A T ++
Sbjct: 256 ISKNASNTLKRVCLELGGKGANIIFADADIDA-LQRGVRHCFYNSGQSCNAPTRMLVEQA 314
Query: 521 ITPWEDKLVEHAKAI----KVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLD 576
I DK ++ AK I +V G ++ +GPV+SK++ +++ LIQ + GA L+
Sbjct: 315 IY---DKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTG 371
Query: 577 GRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHG 636
G + + G E G ++ PT+ +DV +M ++E++FGPVL + + DEA+ + N +G
Sbjct: 372 GTGLPM-GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYG 430
Query: 637 SGASIFTTSAVAARKFQIEIAVGQVGIN 664
I + R+ ++ G V +N
Sbjct: 431 LTNYIQSQDRSKCRRIAAQVRSGMVEVN 458
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 177/429 (41%), Gaps = 21/429 (4%)
Query: 245 SLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQRIMFKFQELI 304
S I + PA+ + VP + WR R + K +++
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 305 RRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNIS-NGVDTYS 363
RD +K+ ++ E K A ++V+R EI+ +A GE + S
Sbjct: 76 MRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKK 135
Query: 364 I----REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXX 419
I REP+G+ I F++P A+ GN KP +
Sbjct: 136 IAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE 195
Query: 420 XXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKGKR-IQCNIGA 478
LP GV N + G +A+ + + G R I +G
Sbjct: 196 AGLPAGVFNTITGRGSEIGDYIVEH--QAVNFINFSGSTGIGERIGKMAGMRPIMLELGG 253
Query: 479 KNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVE--HAKAIK 536
K+ A+V+ DA ++ T ++A FG +GQ+C A+ V+ + + D+LVE K +
Sbjct: 254 KDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVA---DELVEKIREKVLA 310
Query: 537 VNAGT-ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTI 595
+ G E +AD+ P+I + + + LI + GA L + + GN I P +
Sbjct: 311 LTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPIL 363
Query: 596 LSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIE 655
VT +M E+ FGPVL ++ S++EAIEI N++ +G ASIFT A +
Sbjct: 364 FDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQ 423
Query: 656 IAVGQVGIN 664
+ VG V IN
Sbjct: 424 LEVGTVHIN 432
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 177/430 (41%), Gaps = 23/430 (5%)
Query: 245 SLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQRIMFKFQELI 304
S I + PA+ + VP + WR R + K +++
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 305 RRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNIS-NGVDTYS 363
RD +K+ ++ E K A ++V+R EI+ +A GE + S
Sbjct: 76 MRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKK 135
Query: 364 I----REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXX 419
I REP+G+ I F++P A+ GN KP +
Sbjct: 136 IAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE 195
Query: 420 XXLPNGVLNIVHGTXXXXXXXXXX-XXVKAIALVGPNSDVADIYSRASAKGKR-IQCNIG 477
LP GV N + G V I G I A G R I +G
Sbjct: 196 AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA---GMRPIMLALG 252
Query: 478 AKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVE--HAKAI 535
K+ A+V+ DA ++ T ++A FG +GQ+C A+ V+ + + D+LVE K +
Sbjct: 253 GKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVA---DELVEKIREKVL 309
Query: 536 KVNAGT-ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPT 594
+ G E +AD+ P+I + + + LI + GA L + + GN I P
Sbjct: 310 ALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPI 362
Query: 595 ILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQI 654
+ VT +M E+ FGPVL ++ S++EAIEI N++ +G ASIFT A
Sbjct: 363 LFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAE 422
Query: 655 EIAVGQVGIN 664
++ VG V IN
Sbjct: 423 QLEVGTVHIN 432
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 206/490 (42%), Gaps = 28/490 (5%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLS--TNXXXXXXXXXXXXXXXXWRNTPVTN 292
IGG FVD++ + + +NP ++ QV L+ ++ W +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGV------AT 345
R R++++ +++ + ++LA + G T A V ++ + G AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 346 LQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEK 405
+ I + N + T + +EP+GVC + +++P M W + GNT ++KP++
Sbjct: 160 IPINQARPNRNL---TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 406 VPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIY-S 463
P +P GV+NI+ G+ V+ I G I S
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-T 522
A + K++ +G K+ ++ D ++ + +++ F G+ C+A + I
Sbjct: 277 CALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHN 336
Query: 523 PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
+ K+VE + +K+ E + + GP + ++ Q + GA L+ G +
Sbjct: 337 QFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPR 396
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE--SIDEAIEIVNRNRHGSGAS 640
PG+ F PT+ +DV +M KE+ FGP+++ + +D + N G +
Sbjct: 397 PGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 641 IFTTSAVAARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFY 698
+FT A ++ G V IN V PF F S F DL G+ ++ Y
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSG--FGKDL---GEAALNEY 507
Query: 699 TQIKTVTQQW 708
+IKTVT ++
Sbjct: 508 LRIKTVTFEY 517
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 206/490 (42%), Gaps = 28/490 (5%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLS--TNXXXXXXXXXXXXXXXXWRNTPVTN 292
IGG FVD++ + + +NP ++ QV L+ ++ W +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGV------AT 345
R R++++ +++ + ++LA + G T A V ++ + G AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 346 LQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEK 405
+ I + N + T + +EP+GVC + +++P M W + GNT ++KP++
Sbjct: 160 IPINQARPNRNL---TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 406 VPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIY-S 463
P +P GV+NI+ G+ V+ I G I S
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-T 522
A + K++ +G K+ ++ D ++ + +++ F G+ C+A + I
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHN 336
Query: 523 PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
+ K+VE + +K+ E + + GP + ++ Q + GA L+ G +
Sbjct: 337 QFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPR 396
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE--SIDEAIEIVNRNRHGSGAS 640
PG+ F PT+ +DV +M KE+ FGP+++ + +D + N G +
Sbjct: 397 PGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 641 IFTTSAVAARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFY 698
+FT A ++ G V IN V PF F S F DL G+ ++ Y
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSG--FGKDL---GEAALNEY 507
Query: 699 TQIKTVTQQW 708
+IKTVT ++
Sbjct: 508 LRIKTVTFEY 517
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 176/430 (40%), Gaps = 23/430 (5%)
Query: 245 SLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQRIMFKFQELI 304
S I + PA+ + VP + WR R + K +++
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 305 RRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNIS-NGVDTYS 363
RD +K+ ++ E K A ++V+R EI+ +A GE + S
Sbjct: 76 MRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKK 135
Query: 364 I----REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXX 419
I REP+G+ I F++P A+ GN KP +
Sbjct: 136 IAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE 195
Query: 420 XXLPNGVLNIVHGTXXXXXXXXXX-XXVKAIALVGPNSDVADIYSRASAKGKR-IQCNIG 477
LP GV N + G V I G I A G R I +G
Sbjct: 196 AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA---GMRPIMLELG 252
Query: 478 AKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVE--HAKAI 535
K+ A+V+ DA ++ T ++A FG +GQ+ A+ V+ + + D+LVE K +
Sbjct: 253 GKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVA---DELVEKIREKVL 309
Query: 536 KVNAGT-ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPT 594
+ G E +AD+ P+I + + + LI + GA L + + GN I P
Sbjct: 310 ALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPI 362
Query: 595 ILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQI 654
+ VT +M E+ FGPVL ++ S++EAIEI N++ +G ASIFT A
Sbjct: 363 LFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAE 422
Query: 655 EIAVGQVGIN 664
++ VG V IN
Sbjct: 423 QLEVGTVHIN 432
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 187/439 (42%), Gaps = 23/439 (5%)
Query: 285 WRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEH-ACGV 343
WRN R I+ K +IRR + + + E GK +A D ++ +E+ A +
Sbjct: 90 WRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQM 149
Query: 344 ATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403
L G+ + + + Y P+GV I ++F + + GNT +LKP+
Sbjct: 150 IELNRGKEILSRPGEQNRY-FYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPA 208
Query: 404 EKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVA-DIY 462
P LP GV+N V G+ ++ + DV +Y
Sbjct: 209 STTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLY 268
Query: 463 SRASA------KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT-TV 515
RA+ KR+ +G K+ VV DA +D +++ + FG +GQKC A + V
Sbjct: 269 ERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAV 328
Query: 516 VYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLL 575
++ +K V AK + V T + +GPVI ++ E++ I++ + G +L+
Sbjct: 329 IHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMT 387
Query: 576 DGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRH 635
G G+ FI PTI++D+ +E++FGPV+ +A D A+EI N +
Sbjct: 388 GGEGDSSTGF----FIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEY 443
Query: 636 GSGASIFTTSAVAARKFQIEIAVGQVGINV----PISVQPPFTLFTSSKPCFAGDLNCDG 691
G ++ T + + + E VG + N I PF F S D G
Sbjct: 444 GLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMS----GTDSKAGG 499
Query: 692 KGGIHFYTQIKTVTQQWKD 710
+ + Q KTV++ + +
Sbjct: 500 PDYLALHMQAKTVSEMYAE 518
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 206/490 (42%), Gaps = 28/490 (5%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLS--TNXXXXXXXXXXXXXXXXWRNTPVTN 292
IGG FVD++ + + +NP ++ QV L+ ++ W +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGV------AT 345
R R++++ +++ + ++LA + G T A V ++ + G AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 346 LQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEK 405
+ I + N + T + +EP+GVC + +++P M W + GNT ++KP++
Sbjct: 160 IPINQARPNRNL---TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 406 VPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIY-S 463
P +P GV+NI+ G+ V+ I G I S
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-T 522
A + K++ +G K+ ++ D ++ + +++ F G+ C+A + I
Sbjct: 277 CALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHN 336
Query: 523 PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
+ K+VE + +K+ E + + GP + ++ Q + GA L+ G +
Sbjct: 337 QFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPR 396
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE--SIDEAIEIVNRNRHGSGAS 640
PG+ F PT+ +DV +M KE+ FGP+++ + +D + N G +
Sbjct: 397 PGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 641 IFTTSAVAARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFY 698
+FT A ++ G V IN V PF F S F DL G+ ++ Y
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSG--FGKDL---GEAALNEY 507
Query: 699 TQIKTVTQQW 708
+IKTVT ++
Sbjct: 508 LRIKTVTFEY 517
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 126/517 (24%), Positives = 209/517 (40%), Gaps = 36/517 (6%)
Query: 213 RNNYQSVMEP---SWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTN 268
R ++ +E W ++ P V + G R+ + SI NPA + +V V +T
Sbjct: 19 RKAFEKALETVNNEWLGQSYPLV--IDGERYETENKIVSI---NPANKEEVVGTVSKATQ 73
Query: 269 XXXXXXXXXXXXXXXXWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN 328
WR T R ++F+ +RR + + + E GK +A
Sbjct: 74 DHAEKAIQAAAKAFETWRYTDPEERAAVLFRAVAKVRRKKHEFSALLVKEAGKPWNEADA 133
Query: 329 DVLRGLEIVEH-ACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGI--CSFDFPAMTPL 385
D ++ +E+ A + L G+ V N G + P GV I +F F M
Sbjct: 134 DTAEAIDFMEYYARQMIELAKGKPV-NSREGERNQYVYTPTGVTVVIPPWNFLFAIMAGT 192
Query: 386 WMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX- 444
+ PI GNT +LKP+ P LP GV+N V G+
Sbjct: 193 TVAPI--VTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHP 250
Query: 445 XVKAIALVGPNSDVADIYSRAS------AKGKRIQCNIGAKNHAVVMPDASIDATLSALV 498
I G I+ RA+ K++ +G K+ VV D I+ ++
Sbjct: 251 KTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIF 310
Query: 499 AAGFGGAGQKCMALT-TVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKE 557
+ FG AGQKC A + VV+ +++E ++ KV ++ +GPVI +
Sbjct: 311 TSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPDSADVYMGPVIDQASFN 370
Query: 558 RMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLC 617
++ I++ E G +L+ G+ GY FI PTI +D+ +E++FGPV+
Sbjct: 371 KIMDYIEIGKEEG-RLVSGGKGDDSKGY----FIEPTIFADLDPKARLMQEEIFGPVVAF 425
Query: 618 MQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINV----PISVQPPF 673
+ S DEA+E+ N +G ++ T + + + E VG + N I PF
Sbjct: 426 SKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEFHVGNLYFNRNCTGAIVGYHPF 485
Query: 674 TLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKD 710
F S D G + + Q KT+++ + +
Sbjct: 486 GGFKMS----GTDSKAGGPDYLALHMQAKTISEMFAE 518
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 188/436 (43%), Gaps = 27/436 (6%)
Query: 240 FVDSKSLT--SIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQRIM 297
F+D K + +DV+NP + ++ ++P + +N P+T R I+
Sbjct: 3 FIDGKWINREDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNIL 62
Query: 298 FKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISN 357
+ I+ ++LA + + GK + A +V R + + A E + S+
Sbjct: 63 MNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIP--SD 120
Query: 358 GVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXX----XXXX 413
++ REP+G+ I F+FP A+ GN + PS K P
Sbjct: 121 DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKII 180
Query: 414 XXXXXXXXLPNGVLNIVHGTXXXX-XXXXXXXXVKAIALVGPNSDVADIYSRASAKGKRI 472
+P GV N++ G V I+ G +S V ++ ++ A K+I
Sbjct: 181 ENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTG-SSKVGELITK-KAGFKKI 238
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVE-- 530
+G N +V+ DA ++ ++AL+ F AGQ C+++ ++ I DK +E
Sbjct: 239 ALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIA---DKFIEMF 295
Query: 531 --HAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENG 588
AK + V + D+GP+IS + E + ++++ + G KLLL G+ +
Sbjct: 296 VNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RDK 348
Query: 589 NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648
PTIL N+ C K + F PV+ ++ +E I+I N +G ++IFT
Sbjct: 349 ALFYPTILEVDRDNILC-KTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINK 406
Query: 649 ARKFQIEIAVGQVGIN 664
+ KF + G V IN
Sbjct: 407 SLKFAENLEFGGVVIN 422
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/490 (22%), Positives = 205/490 (41%), Gaps = 28/490 (5%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLS--TNXXXXXXXXXXXXXXXXWRNTPVTN 292
IGG FVD++ + + +NP ++ QV L+ ++ W +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGV------AT 345
R R++++ +++ + ++LA + G T A V ++ + G AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 346 LQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEK 405
+ I + N + T + +EP+GVC + +++P M W + GNT ++KP++
Sbjct: 160 IPINQARPNRNL---TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 406 VPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIY-S 463
P +P GV+NI+ G+ V+ I G I S
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-T 522
A + K++ +G K+ ++ D ++ + +++ F G+ +A + I
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHN 336
Query: 523 PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
+ K+VE + +K+ E + + GP + ++ Q + GA L+ G +
Sbjct: 337 QFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPR 396
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE--SIDEAIEIVNRNRHGSGAS 640
PG+ F PT+ +DV +M KE+ FGP+++ + +D + N G +
Sbjct: 397 PGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 641 IFTTSAVAARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFY 698
+FT A ++ G V IN V PF F S F DL G+ ++ Y
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSG--FGKDL---GEAALNEY 507
Query: 699 TQIKTVTQQW 708
+IKTVT ++
Sbjct: 508 LRIKTVTFEY 517
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/490 (22%), Positives = 205/490 (41%), Gaps = 28/490 (5%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLS--TNXXXXXXXXXXXXXXXXWRNTPVTN 292
IGG FVD++ + + +NP ++ QV L+ ++ W +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGV------AT 345
R R++++ +++ + ++LA + G T A V ++ + G AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 346 LQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEK 405
+ I + N + T + +EP+GVC + +++P M W + GNT ++KP++
Sbjct: 160 IPINQARPNRNL---TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 406 VPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIY-S 463
P +P GV+NI+ G+ V+ I G I S
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-T 522
A + K++ +G K+ ++ D ++ + +++ F G+ +A + I
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHN 336
Query: 523 PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
+ K+VE + +K+ E + + GP + ++ Q + GA L+ G +
Sbjct: 337 QFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPR 396
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE--SIDEAIEIVNRNRHGSGAS 640
PG+ F PT+ +DV +M KE+ FGP+++ + +D + N G +
Sbjct: 397 PGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 641 IFTTSAVAARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFY 698
+FT A ++ G V IN V PF F S F DL G+ ++ Y
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSG--FGKDL---GEAALNEY 507
Query: 699 TQIKTVTQQW 708
+IKTVT ++
Sbjct: 508 LRIKTVTFEY 517
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/490 (22%), Positives = 205/490 (41%), Gaps = 28/490 (5%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLS--TNXXXXXXXXXXXXXXXXWRNTPVTN 292
IGG FVD++ + + +NP ++ QV L+ ++ W +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGV------AT 345
R R++++ +++ + ++LA + G T A V ++ + G AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 346 LQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEK 405
+ I + N + T + +EP+GVC + +++P M W + GNT ++KP++
Sbjct: 160 IPINQARPNRNL---TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 406 VPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIY-S 463
P +P GV+NI+ G+ V+ I G I S
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-T 522
A + K++ +G K+ ++ D ++ + +++ F G+ +A + I
Sbjct: 277 CALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHN 336
Query: 523 PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
+ K+VE + +K+ E + + GP + ++ Q + GA L+ G +
Sbjct: 337 QFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPR 396
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE--SIDEAIEIVNRNRHGSGAS 640
PG+ F PT+ +DV +M KE+ FGP+++ + +D + N G +
Sbjct: 397 PGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 641 IFTTSAVAARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFY 698
+FT A ++ G V IN V PF F S F DL G+ ++ Y
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSG--FGKDL---GEAALNEY 507
Query: 699 TQIKTVTQQW 708
+IKTVT ++
Sbjct: 508 LRIKTVTFEY 517
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 191/458 (41%), Gaps = 15/458 (3%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNR 293
+ I G++ +S + D++NP Q +++ L+T W + +R
Sbjct: 9 SFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDR 68
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG---E 350
+ ++ K + + + D + M I E G T+ + ++ + + I++ A T ++G E
Sbjct: 69 KAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAM-TYTGELGGVKE 127
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS-EKVPXX 409
S+I G R PLGV + I F+FP + A+ GN+ + KP +
Sbjct: 128 VPSDIE-GKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISG 186
Query: 410 XXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXV-KAIALVGPNSDVADIYSRASAK 468
LP GVLN++ + + I+ G + I A
Sbjct: 187 GTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRA 246
Query: 469 GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT-TVVYVGGITPWEDK 527
KR+ +G N V+ DA +D + A + F GQ CM + +V+ + +K
Sbjct: 247 FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEK 306
Query: 528 LVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYEN 587
K + T+ +GP+I++++ E+ +I+ G +L ++G+ +
Sbjct: 307 FTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRV------- 359
Query: 588 GNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647
GN + P + N + + ++F P+ ++A S EAI++ N +G +++FT+
Sbjct: 360 GNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLE 419
Query: 648 AARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAG 685
KF ++I G +N P F +K G
Sbjct: 420 KGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVG 457
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 191/480 (39%), Gaps = 25/480 (5%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQ 294
LI G V + V NPAT ++ ++ ++ W T R
Sbjct: 27 LINGELVSGEGEKQ-PVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRA 85
Query: 295 RIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGL-EIVEHACGVATLQIGEFVS 353
+ K ++I + A + GK L A+ND + + ++ G A G
Sbjct: 86 ECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAG 145
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXX 413
G + R+PLGV A I +++P M W A+ GN +LKPSE P
Sbjct: 146 EYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITP-LTALK 204
Query: 414 XXXXXXXXLPNGVLNIVHGTXXXXXX-XXXXXXVKAIALVGPNSDVADIYSRASAKGKRI 472
P GV+NI+ G V+ ++L G + I S ++ KR
Sbjct: 205 LAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRT 264
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHA 532
+G K +V DA I+A + + G+ AGQ C A + GI D LVE
Sbjct: 265 HMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIY---DTLVEKL 321
Query: 533 KA----IKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENG 588
A +K A + + +LGP+ S ER+ + ++ +G ++ G NG
Sbjct: 322 GAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE---KRKGNG 378
Query: 589 NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648
+ PT+L+ + +++VFGPV+ ++ ++ + N +++G +S++T
Sbjct: 379 YYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGR 438
Query: 649 ARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKG----GIHFYTQIKTV 704
A + + G +N + S P L+ GK G+ YT ++ V
Sbjct: 439 AHRVSARLQYGCTWVNTHF-------MLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 491
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 189/469 (40%), Gaps = 30/469 (6%)
Query: 252 VNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQRIMFKFQELIRRDMDKL 311
VNPAT ++ P + W+ T V R + + + +R ++
Sbjct: 12 VNPATGQTLAAXPWANAQEIEHALSLAASGFKKWKXTSVAQRAQTLRDIGQALRAHAEEX 71
Query: 312 AMEITSEHGKTLTDAYNDVLRGLEI----VEHACGVATLQIGEFVSNISNGVDTYSIREP 367
A IT E GK + A +V + + EH G A L + V Y P
Sbjct: 72 AQCITREXGKPIKQARAEVTKSAALCDWYAEH--GPAXLNPEPTLVENQQAVIEY---RP 126
Query: 368 LGVCAGICSFDFPAMTPLWMF-----PIAVTCGNTFILKPSEKVPXXXXXXXXXXXXXXL 422
LGV I ++FP LW PI + GN+++LK + V
Sbjct: 127 LGVILAIXPWNFP----LWQVLRGAVPI-LLAGNSYLLKHAPNVTGCAQXIARILAEAGT 181
Query: 423 PNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHA 482
P GV V+ + A+ + G A I ++A A K+ +G +
Sbjct: 182 PAGVYGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPF 241
Query: 483 VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLVEHAKAIKVNAGT 541
+V+ DA ++ + A VA + GQ C A + GI + D+ V A A+K
Sbjct: 242 IVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPL 301
Query: 542 ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTV 601
DLGP ++ + + +Q GA+LLL G I GN+ T+L+DVT
Sbjct: 302 VEENDLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIA----GEGNYYAATVLADVTP 357
Query: 602 NMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQV 661
+ +++++FGPV A+ A+ + N + G A+IFT A + + G V
Sbjct: 358 DXTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGV 417
Query: 662 GINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKD 710
IN + K F +L+ G+H + ++TV WK+
Sbjct: 418 FINGYSASDARVAFGGVKKSGFGRELS---HFGLHEFCNVQTV---WKN 460
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 186/443 (41%), Gaps = 28/443 (6%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQ 294
LIG RF ++ + ++NP T + + +++ W T R
Sbjct: 29 LIGSRF-EAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERS 87
Query: 295 RIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVE----HACGVATLQI-- 348
+ K + I ++ D+ A GK + ND L I++ A V L
Sbjct: 88 NALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPA--IIDCWRFFAGAVRNLHAPA 145
Query: 349 -GEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVP 407
GE++ ++ + R+P+G+ I +++P W A+ GNT + KPSE+ P
Sbjct: 146 AGEYLPGHTSXIR----RDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTP 201
Query: 408 XXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIYSRAS 466
LP GV+N++ G V +++ G + + + A+
Sbjct: 202 LTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAAAA 260
Query: 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWED 526
KR +G K +V DA ++A ++ + G+ AGQ C A + GI +
Sbjct: 261 KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIY---E 317
Query: 527 KLVEH----AKAIKVNAGTESNADLGPVISKQEKERMCRLIQ-VDTESGAKLLLDGRNIL 581
KLV I+ N ++ ++GP+IS+++++R+ ++ + ++ GR
Sbjct: 318 KLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRT-- 375
Query: 582 VPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASI 641
G + G F PT+++ T E + +VFGPV+ + D+A+ N + +G +S+
Sbjct: 376 --GSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSV 433
Query: 642 FTTSAVAARKFQIEIAVGQVGIN 664
+T A + + G IN
Sbjct: 434 WTKDISKAXRAASRLQYGCTWIN 456
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 204/484 (42%), Gaps = 23/484 (4%)
Query: 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPV 290
R + +GGR++ + + + V +PA+ + V WR
Sbjct: 12 RTDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSA 69
Query: 291 TNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE 350
R ++ K+ L+ ++ D LA IT+E GK L +A+ ++L +E A G+
Sbjct: 70 KERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGD 129
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+ + +++P+GV A I ++FP+ A+ G T ++KP+E P
Sbjct: 130 IIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSA 189
Query: 411 XXXXXXXXXXXLPNGVLNIV----HGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRAS 466
+P+GV N++ V I+ G + + A+
Sbjct: 190 LALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAA 249
Query: 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWED 526
KR+ +G +V A++D ++ +A+ F GQ C+ + GI
Sbjct: 250 NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFV 309
Query: 527 KLVEHA--KAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPG 584
K A K ++V G E GP+I+++ E++ + + GA ++ G+
Sbjct: 310 KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR----- 364
Query: 585 YENG-NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
++ G NF PT+L +VT +M C E+ FGP+ ++ ++ +EAI I N G ++
Sbjct: 365 HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYS 424
Query: 644 TSAVAARKFQIEIAVGQVGINVPI--SVQPPFTLFTSSKPCFAGDLNCDG-KGGIHFYTQ 700
+ ++ VG VG+N + SV+ PF S L +G K GI Y +
Sbjct: 425 QDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQS------GLGREGSKYGIDEYLE 478
Query: 701 IKTV 704
+K V
Sbjct: 479 LKYV 482
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 203/484 (41%), Gaps = 23/484 (4%)
Query: 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPV 290
R + +GGR++ + + + V +PA+ + V WR
Sbjct: 12 RTDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSA 69
Query: 291 TNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE 350
R ++ K+ L+ ++ D LA IT+E GK L +A+ ++L +E A G+
Sbjct: 70 KERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGD 129
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXX 410
+ + +++P+GV A I ++FP+ A+ G T ++KP+E P
Sbjct: 130 IIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSA 189
Query: 411 XXXXXXXXXXXLPNGVLNIV----HGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRAS 466
+P+GV N++ V I+ G + + A+
Sbjct: 190 LALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAA 249
Query: 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWED 526
KR+ +G +V A++D ++ +A+ F GQ + + GI
Sbjct: 250 NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIHDAFV 309
Query: 527 KLVEHA--KAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPG 584
K A K ++V G E GP+I+++ E++ + + GA ++ G+
Sbjct: 310 KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR----- 364
Query: 585 YENG-NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
++ G NF PT+L +VT +M C E+ FGP+ ++ ++ +EAI I N G ++
Sbjct: 365 HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYS 424
Query: 644 TSAVAARKFQIEIAVGQVGINVPI--SVQPPFTLFTSSKPCFAGDLNCDG-KGGIHFYTQ 700
+ ++ VG VG+N + SV+ PF S L +G K GI Y +
Sbjct: 425 QDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQS------GLGREGSKYGIDEYLE 478
Query: 701 IKTV 704
+K V
Sbjct: 479 LKYV 482
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 168/391 (42%), Gaps = 24/391 (6%)
Query: 286 RNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVAT 345
R+ P T R ++ K ++I R++D A + GK + A +V ++ + +A
Sbjct: 72 RDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLR----LAE 127
Query: 346 LQIGEFVSNISNGVDTYSI--------REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNT 397
L + + + G TY REPLGV A I F++P + + GN
Sbjct: 128 LDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNA 187
Query: 398 FILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSD 457
++KPS P P + +++ V A++ G +++
Sbjct: 188 VVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTG-STE 246
Query: 458 VADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVY 517
V + + K+ +G + A+V+ DA +D + + AGQ+C A+ V+
Sbjct: 247 VGERVVKVGGV-KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVL- 304
Query: 518 VGGITPWEDKLVEHA----KAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKL 573
P KLVE +++V + D+GP+IS + M I+ E G ++
Sbjct: 305 --AERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRV 362
Query: 574 LLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRN 633
L GR L P Y F+ +D +M YK +VF PV L ++ + +D+AIE+ N
Sbjct: 363 LAGGRR-LGPTYVQPTFVEAP--ADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGR 419
Query: 634 RHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
+G A++F V R+ + VG + IN
Sbjct: 420 PYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN 450
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 170/394 (43%), Gaps = 30/394 (7%)
Query: 286 RNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVAT 345
R+ P T R ++ K ++I R++D A + GK + A +V ++ + +A
Sbjct: 72 RDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLR----LAE 127
Query: 346 LQIGEFVSNISNGVDTYSI--------REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNT 397
L + + + G TY REPLGV A I F++P + + GN
Sbjct: 128 LDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNA 187
Query: 398 FILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSD 457
++KPS P P + +++ V A++ G +++
Sbjct: 188 VVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTG-STE 246
Query: 458 VADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVY 517
V + + K+ +G + A+V+ DA +D + + AGQ+C A+ V+
Sbjct: 247 VGERVVKVGGV-KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVL- 304
Query: 518 VGGITPWEDKLVEHA----KAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKL 573
P KLVE +++V + D+GP+IS + M I+ E G ++
Sbjct: 305 --AERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRV 362
Query: 574 LLDGRNILVPGYENGNFIGPTIL---SDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIV 630
L GR + ++ PT++ +D +M YK +VF PV L ++ + +D+AIE+
Sbjct: 363 LAGGRRL------GPTYVQPTLVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELA 416
Query: 631 NRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
N +G A++F V R+ + VG + IN
Sbjct: 417 NGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN 450
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 193/463 (41%), Gaps = 34/463 (7%)
Query: 230 PRVPNL---IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWR 286
P + NL IGGR+ DS + DV NPAT ++++VP
Sbjct: 7 PLLENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTN 66
Query: 287 NTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATL 346
P+ R++ + ++ ++ + +++ + EHGK +A +V ++A G
Sbjct: 67 PWPIETRRKWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEV-------DYAAGFF-- 117
Query: 347 QIGEFVSNISNGVDTYSIRE------------PLGVCAGICSFDFPAMTPLWMFPIAVTC 394
++ + + +D+++I E P+GV I ++FP A+
Sbjct: 118 ---DYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAA 174
Query: 395 GNTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXX-XXXXVKAIALVG 453
G ++KP+ + P LP+G +N+V G V ++ G
Sbjct: 175 GCPSVIKPASETPLTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTG 234
Query: 454 PNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT 513
+ + + K++ +G +V DA ++A L+A F G GQ C+
Sbjct: 235 STEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCAN 294
Query: 514 TV-VYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAK 572
+ V+ + KL E V G D+GP+I+KQ +++ R +Q + GA
Sbjct: 295 RIFVHEKVADAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGAS 354
Query: 573 LLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNR 632
L+ G+ G +G F PT++ V CY+E+ FGP++ + +E I+ N
Sbjct: 355 LVA-GKQPAELG--DGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGND 411
Query: 633 NRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQP--PF 673
G + +FT A A++ + G VG N P PF
Sbjct: 412 TEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPF 454
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 169/394 (42%), Gaps = 30/394 (7%)
Query: 286 RNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVAT 345
R+ P T R ++ K ++I R++D A + GK + A +V ++ + +A
Sbjct: 72 RDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLR----LAE 127
Query: 346 LQIGEFVSNISNGVDTYSI--------REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNT 397
L + + + G TY REPLGV A I F++P + + GN
Sbjct: 128 LDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNA 187
Query: 398 FILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSD 457
++KPS P P + +++ V A++ G +++
Sbjct: 188 VVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTG-STE 246
Query: 458 VADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVY 517
V + + K+ +G + A+V+ DA +D + + AGQ+C A+ V+
Sbjct: 247 VGERVVKVGGV-KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVL- 304
Query: 518 VGGITPWEDKLVEHA----KAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKL 573
P KLVE +++V + D+GP+IS + M I+ E G ++
Sbjct: 305 --AERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRV 362
Query: 574 LLDGRNILVPGYENGNFIGPTIL---SDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIV 630
L GR + ++ PT++ +D +M YK +VF PV ++ + +D+AIE+
Sbjct: 363 LAGGRRL------GPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELA 416
Query: 631 NRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
N +G A++F V R+ + VG + IN
Sbjct: 417 NGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN 450
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 162/389 (41%), Gaps = 15/389 (3%)
Query: 285 WRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEH-ACGV 343
WR+T R + K + R+ + +L+ E GK AY DV ++ +E+ A +
Sbjct: 584 WRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREM 643
Query: 344 ATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403
L + V + ++ Y EP GV A I ++FP + M A+ GN + KPS
Sbjct: 644 IRLGQPQRVGHAPGELNHY-FYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPS 702
Query: 404 EKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXX-XVKAIALVGPNSDVADIY 462
LP GV N G + IA G I
Sbjct: 703 GITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRII 762
Query: 463 SRAS------AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVV 516
RA+ A K+I +G KN ++ DA +D + ++ + FG GQKC A + V+
Sbjct: 763 ERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVI 822
Query: 517 YVGGIT-PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLL 575
+ + + ++LV AKA KV + +G V + + + ++ G L
Sbjct: 823 VLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLY- 881
Query: 576 DGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRH 635
VP E G F+ TI+ + +E++FGPVL M+A+ D+AIE N +
Sbjct: 882 ---ESPVPAGE-GYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQF 937
Query: 636 GSGASIFTTSAVAARKFQIEIAVGQVGIN 664
IF+ S K + E VG + IN
Sbjct: 938 ALTGGIFSRSPEHLAKARREFRVGNLYIN 966
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 185/462 (40%), Gaps = 12/462 (2%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNR 293
+LIGG++V+ S +NP ++++ ++ W TP R
Sbjct: 15 HLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAER 74
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
I+++ EL+ +++ + E G T + A ++ I + + G
Sbjct: 75 SAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGRISP 134
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXX 413
+ + G + R GV I ++FP + A+ GN ++KP+ P
Sbjct: 135 SNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVI 194
Query: 414 -XXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXV-KAIALVGPNSDVADIYSRASAKG-- 469
+P GV++ V G V K I+ G + A G
Sbjct: 195 PARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPM 254
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKL 528
K + +G VV+ DA IDA A F GQ CM++ V+ + + +K
Sbjct: 255 KTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKF 314
Query: 529 VEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENG 588
VE K I + +GPVI+ + + I++ + GA + V G G
Sbjct: 315 VEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGA-------TVQVEGPIEG 367
Query: 589 NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648
+ P + SDVT +ME +E++FGP++ ++A+ A E+ N + G A++++
Sbjct: 368 RLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDR 427
Query: 649 ARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCD 690
A +F ++I G V IN P +F SK G N D
Sbjct: 428 AAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGD 469
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 155/392 (39%), Gaps = 26/392 (6%)
Query: 285 WRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVA 344
W P+ R ++ +F ++ D+LA I E GK L ++ +V + V +
Sbjct: 58 WARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQAF 117
Query: 345 TLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSE 404
+ GE +++ +P GV A ++FP P A+ GN + KPSE
Sbjct: 118 RERTGEKSGPLADATAVLR-HKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSE 176
Query: 405 KVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSR 464
P LP GVLN+V G + + G + ++S+
Sbjct: 177 LTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQ 236
Query: 465 ASAKGKRI-QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP 523
+ ++I G N VV A +DA + ++ + F AGQ+C ++ G
Sbjct: 237 FGGQPQKILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGA-- 294
Query: 524 WED----KLVEHAKAIKVNAGTESNADL-GPVISKQEKERMCRLIQVDTESGAKLLL--- 575
W D +LV + ++V E A G VIS E + + + GA+ LL
Sbjct: 295 WGDALLARLVAVSATLRVGRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXT 354
Query: 576 ---DGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNR 632
DG +L PG + DV+ E E+ FGP+L ++ AI N
Sbjct: 355 QPIDGAALLTPG-----------ILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANA 403
Query: 633 NRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
++G A + + S +F +E G V N
Sbjct: 404 TQYGLAAGLLSDSRERFEQFLVESRAGIVNWN 435
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 151/367 (41%), Gaps = 15/367 (4%)
Query: 285 WRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVA 344
W + P R I+ + + +R+ + L ++ E GK + +V +++ ++A G++
Sbjct: 73 WADIPAPKRGEIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGVGEVQEYVDVCDYAVGLS 132
Query: 345 TLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSE 404
+ G + + G P+G+ I +F+FP W IA+TCGN + K +
Sbjct: 133 RMIGGPVLPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAP 192
Query: 405 KVPXXXXXXXXXXXXXX----LPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVAD 460
P LP + ++ G V ++ G
Sbjct: 193 TTPLTSVAVTKIVAEVLEQNNLPGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGKM 252
Query: 461 IYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGG 520
+ + R +G N +V DA ++ + + V A G AGQ+C ++
Sbjct: 253 VAMMVQERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHES 312
Query: 521 ITPWEDKLVEH----AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLD 576
+ D +VE K +++ + + GP+ +KQ ++ I+ + G L+
Sbjct: 313 V---HDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCG 369
Query: 577 GRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHG 636
G+ + P GN++ PTI++ + + + F P+L ++ ++ +EA N + G
Sbjct: 370 GKVMDRP----GNYVEPTIITGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQG 425
Query: 637 SGASIFT 643
+SIFT
Sbjct: 426 LSSSIFT 432
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 160/386 (41%), Gaps = 16/386 (4%)
Query: 285 WRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHAC--G 342
WR+ +R I+ ++ D+LA T E GK L+++ +V + I + G
Sbjct: 42 WRHEEPASRAEILHDIANALKEHEDELAKXXTLEXGKLLSESKEEVELCVSICNYYADHG 101
Query: 343 VATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKP 402
L+ + S++ N Y +++ GV ++FP + +F GN +LK
Sbjct: 102 PEXLKPTKLNSDLGNA---YYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKH 158
Query: 403 SEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIY 462
+ VP P G L ++ + ++ +AL G + +
Sbjct: 159 AHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVA 218
Query: 463 SRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT 522
A K+ +G + +V+ DA + L A GQ C + ++
Sbjct: 219 EAAGKNLKKSTXELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVE---K 275
Query: 523 PWEDKLVEHAKAIKVN--AGT--ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGR 578
D+++ K + N AG E++ L P S++ KE++ ++ ++GAK+
Sbjct: 276 SRYDEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYP 335
Query: 579 NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSG 638
I G F PTIL+D+ + + ++VFGP+ E + AI++ N + +G G
Sbjct: 336 EI----DSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLG 391
Query: 639 ASIFTTSAVAARKFQIEIAVGQVGIN 664
+S+ + A+K +I G IN
Sbjct: 392 SSVIGSDIDRAKKVSAQIETGXTVIN 417
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 143/367 (38%), Gaps = 15/367 (4%)
Query: 285 WRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVA 344
W + P R I+ + + +R + L ++ E GK L + +V ++I ++A G++
Sbjct: 75 WADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLS 134
Query: 345 TLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSE 404
+ G + + +G P+G+ I +F+FP W IA+ CGN + K +
Sbjct: 135 RMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAP 194
Query: 405 KVPXXXXXXXXXXXXX----XLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVAD 460
LP + ++ G V ++ G
Sbjct: 195 TTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQ 254
Query: 461 IYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGG 520
+ + R +G N + DA + + + + A G AGQ+C +
Sbjct: 255 VGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHES 314
Query: 521 ITPWEDKLVEHAKA----IKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLD 576
I D++V K I+V + N GP+ +KQ ++ + G ++
Sbjct: 315 I---HDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYG 371
Query: 577 GRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHG 636
G+ + P GN++ PTI++ + + + F P+L + ++ +E N + G
Sbjct: 372 GKVMDRP----GNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQG 427
Query: 637 SGASIFT 643
+SIFT
Sbjct: 428 LSSSIFT 434
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 164/391 (41%), Gaps = 32/391 (8%)
Query: 286 RNTPVTNRQRIMFKFQELIRRDMDKLAMEITSE-HGKTLTDAYNDVLRGLEIVEHACGVA 344
R P+ R + + Q LI+ +L + ++ H Y +V+ LE +E+
Sbjct: 35 RTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ-- 92
Query: 345 TLQIGEFVSN-------ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNT 397
++ E+ ++ + + Y EPLGV I ++++P + A+ GN
Sbjct: 93 --KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNA 150
Query: 398 FILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSD 457
+LKPSE + L + +++G I G ++
Sbjct: 151 VVLKPSE-LSENMASLLATIIPQYLDKDLYPVING-GVPETTELLKERFDHILYTG-STG 207
Query: 458 VADIYSRASAKG-KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVV 516
V I A+AK + +G K+ V + +D + F +GQ C+A ++
Sbjct: 208 VGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYIL 267
Query: 517 YVGGITPWEDKLVEH-AKAIKVNAGTESNA--DLGPVISKQEKERMCRLIQVDTESGAKL 573
I ++++VE K++K G ++ D G +IS + +R+ LI+ G K+
Sbjct: 268 CDPSI---QNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIE-----GQKV 319
Query: 574 LLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRN 633
G G +I PTIL+DV +E++FGPVL + S++EAI+ +N+
Sbjct: 320 AYGGT-----GDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQR 374
Query: 634 RHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
+F+++ +K E + G V N
Sbjct: 375 EKPLALYMFSSNDKVIKKMIAETSSGGVAAN 405
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 144/355 (40%), Gaps = 33/355 (9%)
Query: 360 DTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXX 419
D Y EPLGV I ++++P + AV GN ILKPSE V
Sbjct: 96 DLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSE-VSGHMADLLATLIP 154
Query: 420 XXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKG-KRIQCNIGA 478
+ + +V G I G ++ V I A+AK + +G
Sbjct: 155 QYMDQNLYLVVKG-GVPETTELLKERFDHIMYTG-STAVGKIVMAAAAKHLTPVTLELGG 212
Query: 479 KNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEH-AKAIKV 537
K+ V D +D + F +GQ C+A ++ I ++++VE K++K
Sbjct: 213 KSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSI---QNQIVEKLKKSLKD 269
Query: 538 NAGTESNA--DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY--ENGNFIGP 593
G ++ D G +I+ + +R+ K L+D + + G ++ +I P
Sbjct: 270 FYGEDAKQSRDYGRIINDRHFQRV------------KGLIDNQKVAHGGTWDQSSRYIAP 317
Query: 594 TILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQ 653
TIL DV +E++FGPV+ + S++EAI+ +N+ +F+ + +K
Sbjct: 318 TILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMI 377
Query: 654 IEIAVGQVGIN-VPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707
E + G V N V + + P F G + G G H +T + +
Sbjct: 378 AETSSGGVTANDVIVHITVPTLPF--------GGVGNSGMGAYHGKKSFETFSHR 424
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 176/428 (41%), Gaps = 42/428 (9%)
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEI--VEHACGVATLQIGE 350
R++ + + +E + + + L + + GK DV+ EI V H A + E
Sbjct: 52 RKQSLERLKEAVINNKEALYSALAEDLGKP-----KDVVDLAEIGAVLHEIDFALAHLDE 106
Query: 351 FVSNIS-------NGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403
+V+ +S + Y ++EP GV I F++P L A+ GNT I+KPS
Sbjct: 107 WVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPS 166
Query: 404 EKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYS 463
E P P V I G I G + +V +
Sbjct: 167 ETTPETSAVIEKIIAEAFAPEYVAVIQGG--RDENSHLLSLPFDFIFFTG-SPNVGKVVM 223
Query: 464 RASAKG-KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGI 521
+A+AK + +G K +V+PDA +D T++ L+ F +GQ C+A + V+
Sbjct: 224 QAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVK 283
Query: 522 TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNIL 581
++LVE K E N+ G ++++++ +R+ L++ G L+ ++
Sbjct: 284 DALLERLVERVK----TELPEINST-GKLVTERQVQRLVSLLE--ATQGQVLVGSQADV- 335
Query: 582 VPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGA-S 640
+ + T++ V N E++FGP+L ++ +S+ AI+ VN++ A
Sbjct: 336 -----SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVY 390
Query: 641 IFTTSAVAARKFQIEIAVGQVGIN-VPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYT 699
+F A+ +I G +N V + P+ F G + G G H +
Sbjct: 391 VFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPF--------GGIGASGMGEYHGHF 442
Query: 700 QIKTVTQQ 707
T T +
Sbjct: 443 SYLTFTHK 450
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 140/364 (38%), Gaps = 26/364 (7%)
Query: 285 WRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVA 344
W TP R + + L+ + E GKTL DA +++ + +
Sbjct: 566 WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQG 625
Query: 345 TLQIG-EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403
G E G GV I ++FP L A+ GN+ + KP+
Sbjct: 626 RKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPA 685
Query: 404 EKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYS 463
E+ P +P L +V G + + G +++VA +
Sbjct: 686 EQTPRIAREAVALLHEAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTG-STEVARSIN 744
Query: 464 RA-SAKGKRIQ---CNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVG 519
RA +AK I G N + A + +V + F AGQ+C AL +
Sbjct: 745 RALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQE 804
Query: 520 GITPWEDKLVEH----AKAIKVNAGTESNADLGPVISKQEKERM-CRLIQVDTESGAKLL 574
+ D+++E A+ +K+ ++ +GPVI + K+R+ + ++ TE A+L
Sbjct: 805 DVA---DRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTE--ARLH 859
Query: 575 LDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQA--ESIDEAIEIVNR 632
G P E G F+ P I E+VFGP+L ++ E+++ + + R
Sbjct: 860 FAG-----PAPE-GCFVAPHIFELTEAGQ--LTEEVFGPILHVVRYRPENLERVLRAIER 911
Query: 633 NRHG 636
+G
Sbjct: 912 TGYG 915
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 175/428 (40%), Gaps = 42/428 (9%)
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEI--VEHACGVATLQIGE 350
R++ + + +E + + + L + + GK DV+ EI V H A + E
Sbjct: 52 RKQSLERLKEAVINNKEALYSALAEDLGKP-----KDVVDLAEIGAVLHEIDFALAHLDE 106
Query: 351 FVSNIS-------NGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403
+V+ +S + Y ++EP GV I F++P L A+ GNT I+KPS
Sbjct: 107 WVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPS 166
Query: 404 EKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYS 463
E P P V I G I G + +V +
Sbjct: 167 ETTPETSAVIEKIIAEAFAPEYVAVIQGG--RDENSHLLSLPFDFIFFTG-SPNVGKVVM 223
Query: 464 RASAKG-KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGI 521
+A+AK + +G K +V+PDA +D T++ L+ F +GQ +A + V+
Sbjct: 224 QAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVK 283
Query: 522 TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNIL 581
++LVE K E N+ G ++++++ +R+ L++ G L+ ++
Sbjct: 284 DALLERLVERVK----TELPEINST-GKLVTERQVQRLVSLLE--ATQGQVLVGSQADV- 335
Query: 582 VPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGA-S 640
+ + T++ V N E++FGP+L ++ +S+ AI+ VN++ A
Sbjct: 336 -----SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVY 390
Query: 641 IFTTSAVAARKFQIEIAVGQVGIN-VPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYT 699
+F A+ +I G +N V + P+ F G + G G H +
Sbjct: 391 VFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPF--------GGIGASGMGEYHGHF 442
Query: 700 QIKTVTQQ 707
T T +
Sbjct: 443 SYLTFTHK 450
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/386 (19%), Positives = 162/386 (41%), Gaps = 16/386 (4%)
Query: 285 WRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVA 344
W+ V R + ++++ I ++L + ++ G+ L+ ++ L ++ CG+A
Sbjct: 44 WQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR-LSITVLEIDSFLASIDRWCGLA 102
Query: 345 TLQIGEFVSNISNGVDTYSIRE---PLGVCAGICSFDFP-AMTPLWMFPIAVTCGNTFIL 400
+ N S + ++++ P + I ++FP ++ + P A+ G ++
Sbjct: 103 PELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSXIDTIP-ALLAGCAVVV 159
Query: 401 KPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVAD 460
KPSE P VL V G V + G + +
Sbjct: 160 KPSEIAPRFVAPLLXALNTVPELRDVLIFVEG--GGETGANLINYVDFVCFTGSVATGRE 217
Query: 461 IYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVG- 519
+ A+ + +G K+ A+V+ A+++ SA++ GQ C+++ + YV
Sbjct: 218 VAETAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERI-YVAE 276
Query: 520 -GITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGR 578
+ +L+ A +++ + +GP+I++++ + I E GA + G+
Sbjct: 277 SKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGK 336
Query: 579 NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSG 638
V G + PT+ ++V + + E+ FGP+ ++EA+ + N +G
Sbjct: 337 ---VEELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLS 393
Query: 639 ASIFTTSAVAARKFQIEIAVGQVGIN 664
A++F S A K ++ G + IN
Sbjct: 394 AAVFAGSEDEALKVARQLNAGAISIN 419
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 122/349 (34%), Gaps = 29/349 (8%)
Query: 285 WRNTPVTNRQRIMFKFQELIR--RDMDKLAMEITSEHGKTLTDAYNDVLRGL-EIVEHAC 341
W P+ +R ++ K +++ R + LA + + GKT+ A D L +
Sbjct: 116 WDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQ-GKTVIQAEIDAAAELIDFFRFNA 174
Query: 342 GVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAM------TPLWMFPIAVTCG 395
A GE ++ + R G A I F+F A+ P M G
Sbjct: 175 KFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPALM-------G 227
Query: 396 NTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGP 454
N + KPS+ LP ++ V + I G
Sbjct: 228 NVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGS 287
Query: 455 NSDVADIYSRASAKGKRIQC------NIGAKNHAVVMPDASIDATLSALVAAGFGGAGQK 508
++ + + R + G KN V A +D+ +S + + F GQK
Sbjct: 288 VPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQK 347
Query: 509 CMALTTVVYVGGITPW-EDKLVEHAKAIKVNAGTESNAD-LGPVISKQEKERMCRLIQVD 566
C A + + + P + +L+E IKV E VI + R+ + ++
Sbjct: 348 CSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHA 407
Query: 567 TESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL 615
S + +L G G ++ P I+ KE++FGPVL
Sbjct: 408 RSSPSLSILAGGQC---NESVGYYVEPCIIESKDPQEPIMKEEIFGPVL 453
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 135/380 (35%), Gaps = 32/380 (8%)
Query: 285 WRNTPVTNRQRIMFKFQELIR--RDMDKLAMEITSEHGKTLTDAYNDVLRGL-EIVEHAC 341
W P+ +R +I K +++ R + LA + + GKT+ A D L +
Sbjct: 119 WDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQ-GKTVIQAEIDAAAELIDFFRFNA 177
Query: 342 GVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAM------TPLWMFPIAVTCG 395
A G+ ++ ++ R G A I F+F A+ P M G
Sbjct: 178 KYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAGAPALM-------G 230
Query: 396 NTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGP 454
N + KPS+ LP ++ V + I G
Sbjct: 231 NVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGS 290
Query: 455 NSDVADIYSRASAKGKRIQC------NIGAKNHAVVMPDASIDATLSALVAAGFGGAGQK 508
++ + + R G KN V A +++ +S + + F GQK
Sbjct: 291 VPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQK 350
Query: 509 CMALTTVVYVGGITPW-EDKLVEHAKAIKVNAGTESNAD-LGPVISKQEKERMCRLIQVD 566
C A + + + P + +L+E IKV E VI + R+ + ++
Sbjct: 351 CSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHA 410
Query: 567 TESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL--LCMQAESID 624
S + +L G G F+ P I+ KE++FGPVL +
Sbjct: 411 RSSPSLTILAGGKC---DDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYK 467
Query: 625 EAIEIVNR-NRHGSGASIFT 643
E +++V+ +G ++F+
Sbjct: 468 ETLQLVDSTTSYGLTGAVFS 487
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 134/380 (35%), Gaps = 32/380 (8%)
Query: 285 WRNTPVTNRQRIMFKFQELIR--RDMDKLAMEITSEHGKTLTDAYNDVLRGL-EIVEHAC 341
W P+ +R +I K +++ R + LA + + GKT+ A D L +
Sbjct: 119 WDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQ-GKTVIQAEIDAAAELIDFFRFNA 177
Query: 342 GVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAM------TPLWMFPIAVTCG 395
A G+ ++ ++ R G A I F+F A+ P M G
Sbjct: 178 KYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAGAPALM-------G 230
Query: 396 NTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGP 454
N + KPS+ LP ++ V + I G
Sbjct: 231 NVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGS 290
Query: 455 NSDVADIYSRASAKGKRIQC------NIGAKNHAVVMPDASIDATLSALVAAGFGGAGQK 508
++ + + R G KN V A +++ +S + + F GQK
Sbjct: 291 VPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQK 350
Query: 509 CMALTTVVYVGGITPW-EDKLVEHAKAIKVNAGTESNAD-LGPVISKQEKERMCRLIQVD 566
C A + + P + +L+E IKV E VI + R+ + ++
Sbjct: 351 CSACARLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHA 410
Query: 567 TESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL--LCMQAESID 624
S + +L G G F+ P I+ KE++FGPVL +
Sbjct: 411 RSSPSLTILAGGKC---DDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYK 467
Query: 625 EAIEIVNR-NRHGSGASIFT 643
E +++V+ +G ++F+
Sbjct: 468 ETLQLVDSTTSYGLTGAVFS 487
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 134/380 (35%), Gaps = 32/380 (8%)
Query: 285 WRNTPVTNRQRIMFKFQELIR--RDMDKLAMEITSEHGKTLTDAYNDVLRGL-EIVEHAC 341
W P+ +R +I K +++ R + LA + + GKT+ A D L +
Sbjct: 119 WDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQ-GKTVIQAEIDAAAELIDFFRFNA 177
Query: 342 GVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAM------TPLWMFPIAVTCG 395
A G+ ++ ++ R G A I F+F A+ P M G
Sbjct: 178 KYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAGAPALM-------G 230
Query: 396 NTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTX-XXXXXXXXXXXVKAIALVGP 454
N + KPS+ LP ++ V + I G
Sbjct: 231 NVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGS 290
Query: 455 NSDVADIYSRASAKGKRIQC------NIGAKNHAVVMPDASIDATLSALVAAGFGGAGQK 508
++ + + R G KN V A +++ +S + + F GQK
Sbjct: 291 VPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQK 350
Query: 509 CMALTTVVYVGGITPW-EDKLVEHAKAIKVNAGTESNAD-LGPVISKQEKERMCRLIQVD 566
C A + + P + +L+E IKV E VI + R+ + ++
Sbjct: 351 CSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHA 410
Query: 567 TESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL--LCMQAESID 624
S + +L G G F+ P I+ KE++FGPVL +
Sbjct: 411 RSSPSLTILAGGKC---DDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYK 467
Query: 625 EAIEIVNR-NRHGSGASIFT 643
E +++V+ +G ++F+
Sbjct: 468 ETLQLVDSTTSYGLTGAVFS 487
>pdb|2GW5|A Chain A, Crystal Structure Of Lir-2 (Ilt4) At 1.8 : Differences
From Lir-1 (Ilt2) In Regions Implicated In The Binding
Of The Cytomegalovirus Class I Mhc Homolog Ul18
Length = 197
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 593 PTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGAS--IFTTSAVAAR 650
P + S V ++C + FG +LC + E DE + +N H G+S IF+ V+
Sbjct: 109 PVVTSGGRVTLQCESQVAFGGFILCKEGE--DEHPQCLNSQPHARGSSRAIFSVGPVSPN 166
Query: 651 K 651
+
Sbjct: 167 R 167
>pdb|2DYP|D Chain D, Crystal Structure Of Lilrb2(Lir2ILT4CD85D) COMPLEXED WITH
Hla-G
Length = 196
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 593 PTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGAS--IFTTSAVAAR 650
P + S V ++C + FG +LC + E DE + +N H G+S IF+ V+
Sbjct: 109 PVVTSGGRVTLQCESQVAFGGFILCKEGE--DEHPQCLNSQPHARGSSRAIFSVGPVSPN 166
Query: 651 K 651
+
Sbjct: 167 R 167
>pdb|3N13|A Chain A, Crystal Stricture Of D143a Chitinase In Complex With Nag
From Bacillus Cereus Nctu2
Length = 333
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 451 LVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDAS-----IDATLSALVAAGFGGA 505
+ G ++D S +KGK++ +IG +N V++PD + I++ S + GF G
Sbjct: 54 VYGTDADFKSDISYLKSKGKKVVLSIGGQNGVVLLPDNAAKDRFINSIQSLIDKYGFDGI 113
Query: 506 GQKCMALTTVVYVGG 520
+AL + +Y+ G
Sbjct: 114 ---DIALESGIYLNG 125
>pdb|3QCW|A Chain A, Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6), No
Splice Inserts
pdb|3QCW|B Chain B, Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6), No
Splice Inserts
Length = 1245
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 31/177 (17%)
Query: 511 ALTTVVYVGGITPWEDKLVE-HAKAIKVNAGTESNADLGPVISKQ----------EKERM 559
AL YVG I D ++ +K I+ A +S A + P S++ + M
Sbjct: 576 ALLNYGYVGCI---RDLFIDGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGM 632
Query: 560 CRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQ 619
CR DG N V ++G + + TV Y +F + L +
Sbjct: 633 CR--------------DGWNRYVCDCSGTGYLGRSCEREATV--LSYDGSMFMKIQLPVV 676
Query: 620 AESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLF 676
+ E + + R++ G + TTS +A ++E+ G+V + V + + P TLF
Sbjct: 677 MHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLG-KGPETLF 732
>pdb|3U6U|A Chain A, Crystal Structure Of The Putative Acetylglutamate Kinase
From Thermus Thermophilus
pdb|3U6U|C Chain C, Crystal Structure Of The Putative Acetylglutamate Kinase
From Thermus Thermophilus
Length = 269
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 29/119 (24%)
Query: 109 FEAVGKKDDGLWKLSIK-----NGAHNHEPLKDLSEHP---------SARRFTEREVLLI 154
+EAV K LWK +K G+ + + HP R T+R+ L I
Sbjct: 14 YEAVAKDAASLWKEGVKLLLVHGGSAETNKVAEALGHPPRFLTHPGGQVSRLTDRKTLEI 73
Query: 155 KEMTEAGLKPRQILKRLRQSNPELL---------------STPKHVYNVKAKLRQGNVT 198
EM GL +++++ L++ + + K+V N K K+ +G+ T
Sbjct: 74 FEMVYCGLVNKRLVELLQKEGANAIGLSGLDGRLFVGRRKTAVKYVENGKVKVHRGDYT 132
>pdb|3N15|A Chain A, Crystal Stricture Of E145q Chitinase In Complex With Nag
From Bacillus Cereus Nctu2
Length = 333
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 451 LVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDAS-----IDATLSALVAAGFGG 504
+ G ++D S +KGK++ +IG +N V++PD + I++ S + GF G
Sbjct: 54 VYGTDADFKSDISYLKSKGKKVVLSIGGQNGVVLLPDNAAKDRFINSIQSLIDKYGFDG 112
>pdb|3N11|A Chain A, Crystal Stricture Of Wild-Type Chitinase From Bacillus
Cereus Nctu2
pdb|3N12|A Chain A, Crystal Stricture Of Chitinase In Complex With Zinc Atoms
From Bacillus Cereus Nctu2
Length = 333
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 451 LVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDAS-----IDATLSALVAAGFGG 504
+ G ++D S +KGK++ +IG +N V++PD + I++ S + GF G
Sbjct: 54 VYGTDADFKSDISYLKSKGKKVVLSIGGQNGVVLLPDNAAKDRFINSIQSLIDKYGFDG 112
>pdb|1O20|A Chain A, Crystal Structure Of Gamma-glutamyl Phosphate Reductase
(tm0293) From Thermotoga Maritima At 2.00 A Resolution
Length = 427
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 621 ESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
+++DEAIE + + G SI T + A+KF EI V +N
Sbjct: 334 KNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVN 377
>pdb|3N17|A Chain A, Crystal Stricture Of E145qY227F CHITINASE IN COMPLEX WITH
NAG FROM Bacillus Cereus Nctu2
Length = 333
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 451 LVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDAS-----IDATLSALVAAGFGG 504
+ G ++D S +KGK++ +IG +N V++PD + I++ S + GF G
Sbjct: 54 VYGTDADFKSDISYLKSKGKKVVLSIGGQNGVVLLPDNAAKDRFINSIQSLIDKYGFDG 112
>pdb|3N18|A Chain A, Crystal Stricture Of E145gY227F CHITINASE IN COMPLEX WITH
NAG FROM Bacillus Cereus Nctu2
pdb|3N1A|A Chain A, Crystal Stricture Of E145gY227F CHITINASE IN COMPLEX WITH
CYCLO-(L- His-L-Pro) From Bacillus Cereus Nctu2
Length = 333
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 451 LVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDAS-----IDATLSALVAAGFGG 504
+ G ++D S +KGK++ +IG +N V++PD + I++ S + GF G
Sbjct: 54 VYGTDADFKSDISYLKSKGKKVVLSIGGQNGVVLLPDNAAKDRFINSIQSLIDKYGFDG 112
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,227,579
Number of Sequences: 62578
Number of extensions: 800834
Number of successful extensions: 2229
Number of sequences better than 100.0: 100
Number of HSP's better than 100.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1855
Number of HSP's gapped (non-prelim): 104
length of query: 732
length of database: 14,973,337
effective HSP length: 106
effective length of query: 626
effective length of database: 8,340,069
effective search space: 5220883194
effective search space used: 5220883194
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)