Query 004768
Match_columns 732
No_of_seqs 351 out of 2512
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 05:11:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004768.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004768hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 1E-100 4E-105 853.2 56.8 476 231-710 6-485 (490)
2 4e4g_A Methylmalonate-semialde 100.0 6.8E-99 2E-103 846.5 54.8 492 219-710 14-507 (521)
3 3ed6_A Betaine aldehyde dehydr 100.0 1.1E-96 4E-101 828.3 57.7 476 231-709 32-511 (520)
4 3ifg_A Succinate-semialdehyde 100.0 1.6E-96 5E-101 822.1 55.9 469 231-706 12-482 (484)
5 3ek1_A Aldehyde dehydrogenase; 100.0 1.6E-96 6E-101 824.0 55.0 469 231-708 32-502 (504)
6 3k2w_A Betaine-aldehyde dehydr 100.0 2.8E-96 9E-101 823.6 55.2 480 228-710 9-490 (497)
7 3rh9_A Succinate-semialdehyde 100.0 5.4E-96 2E-100 820.2 56.3 471 230-707 10-483 (506)
8 3iwj_A Putative aminoaldehyde 100.0 3.2E-95 1.1E-99 816.1 60.0 475 230-709 6-490 (503)
9 4f3x_A Putative aldehyde dehyd 100.0 6.8E-96 2E-100 818.8 53.1 469 230-707 24-496 (498)
10 3u4j_A NAD-dependent aldehyde 100.0 3.5E-95 1.2E-99 817.7 58.4 472 231-708 22-498 (528)
11 3prl_A NADP-dependent glyceral 100.0 3.1E-95 1.1E-99 814.8 56.9 467 231-709 11-484 (505)
12 3r31_A BADH, betaine aldehyde 100.0 1.3E-95 5E-100 819.1 53.3 473 228-708 11-488 (517)
13 2o2p_A Formyltetrahydrofolate 100.0 3.6E-95 1.2E-99 815.6 55.1 469 233-708 38-517 (517)
14 1a4s_A ALDH, betaine aldehyde 100.0 7.6E-95 2.6E-99 812.2 57.7 479 226-708 14-496 (503)
15 3jz4_A Succinate-semialdehyde 100.0 1.7E-94 5.7E-99 807.6 58.4 470 231-707 9-480 (481)
16 2d4e_A 5-carboxymethyl-2-hydro 100.0 2.9E-94 9.7E-99 809.8 58.1 473 232-708 27-505 (515)
17 3i44_A Aldehyde dehydrogenase; 100.0 2E-94 6.9E-99 806.7 56.2 468 230-705 24-495 (497)
18 1bxs_A Aldehyde dehydrogenase; 100.0 5.2E-94 1.8E-98 804.1 58.4 470 231-708 20-496 (501)
19 2imp_A Lactaldehyde dehydrogen 100.0 2.3E-94 7.7E-99 806.2 55.1 472 229-707 4-478 (479)
20 1t90_A MMSDH, probable methylm 100.0 2.2E-94 7.6E-99 806.8 54.8 475 231-708 5-480 (486)
21 3b4w_A Aldehyde dehydrogenase; 100.0 1.7E-94 5.7E-99 807.9 53.5 471 231-708 8-482 (495)
22 2ve5_A BADH, betaine aldehyde 100.0 7E-94 2.4E-98 805.2 56.9 476 229-708 4-483 (490)
23 1wnd_A Putative betaine aldehy 100.0 5E-94 1.7E-98 803.2 54.8 468 230-707 22-494 (495)
24 3qan_A 1-pyrroline-5-carboxyla 100.0 8E-94 2.7E-98 808.4 56.7 469 231-708 37-516 (538)
25 1o04_A Aldehyde dehydrogenase, 100.0 5E-94 1.7E-98 804.1 53.8 469 232-708 20-495 (500)
26 3pqa_A Lactaldehyde dehydrogen 100.0 1E-93 3.5E-98 798.9 55.3 457 234-708 2-464 (486)
27 3r64_A NAD dependent benzaldeh 100.0 1E-93 3.4E-98 805.0 53.4 468 231-708 12-485 (508)
28 2j6l_A Aldehyde dehydrogenase 100.0 2.3E-93 7.9E-98 800.5 55.7 472 228-707 20-498 (500)
29 4dng_A Uncharacterized aldehyd 100.0 1.5E-93 5.2E-98 801.5 53.7 469 231-708 6-478 (485)
30 1uxt_A Glyceraldehyde-3-phosph 100.0 2.2E-93 7.5E-98 800.0 53.5 467 231-710 18-494 (501)
31 2w8n_A Succinate-semialdehyde 100.0 2.4E-93 8.1E-98 797.9 53.6 466 232-707 13-485 (487)
32 1euh_A NADP dependent non phos 100.0 8.8E-93 3E-97 792.5 54.4 463 231-708 4-474 (475)
33 3ros_A NAD-dependent aldehyde 100.0 1.4E-92 4.6E-97 789.4 53.5 452 248-708 5-458 (484)
34 1uzb_A 1-pyrroline-5-carboxyla 100.0 7.1E-92 2.4E-96 791.4 55.7 468 231-707 37-515 (516)
35 3ty7_A Putative aldehyde dehyd 100.0 1E-92 3.5E-97 793.4 48.0 466 231-706 7-475 (478)
36 3etf_A Putative succinate-semi 100.0 1.3E-90 4.5E-95 773.7 54.9 453 247-707 7-460 (462)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 7.5E-91 2.6E-95 785.2 53.5 472 229-708 61-551 (563)
38 3ju8_A Succinylglutamic semial 100.0 1.1E-89 3.7E-94 769.7 52.5 461 232-707 6-470 (490)
39 4h7n_A Aldehyde dehydrogenase; 100.0 9.2E-90 3.1E-94 767.9 51.6 457 245-708 4-463 (474)
40 4f9i_A Proline dehydrogenase/d 100.0 3.7E-88 1.3E-92 802.3 56.3 481 229-720 529-1019(1026)
41 3sza_A Aldehyde dehydrogenase, 100.0 1.7E-87 5.9E-92 746.3 50.7 444 266-724 15-467 (469)
42 2y53_A Aldehyde dehydrogenase 100.0 1.8E-87 6.1E-92 759.5 49.5 469 231-707 7-518 (534)
43 3lns_A Benzaldehyde dehydrogen 100.0 2.7E-86 9.3E-91 736.6 51.4 443 247-706 6-455 (457)
44 3v4c_A Aldehyde dehydrogenase 100.0 6.9E-84 2.4E-88 729.2 48.3 467 228-719 26-525 (528)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 5.3E-82 1.8E-86 710.9 48.8 444 244-705 4-480 (510)
46 3haz_A Proline dehydrogenase; 100.0 1.2E-80 4.3E-85 736.3 51.8 436 263-708 544-987 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 1.4E-76 4.9E-81 656.9 31.0 419 250-724 10-447 (463)
48 1vlu_A Gamma-glutamyl phosphat 100.0 8.1E-74 2.8E-78 635.6 25.2 403 270-721 15-449 (468)
49 3k9d_A LMO1179 protein, aldehy 100.0 1.4E-72 4.7E-77 627.7 30.9 415 263-707 6-448 (464)
50 1o20_A Gamma-glutamyl phosphat 100.0 1.5E-70 5.3E-75 604.3 29.2 387 268-708 13-422 (427)
51 4ghk_A Gamma-glutamyl phosphat 100.0 3.1E-70 1.1E-74 604.8 30.9 388 268-707 25-438 (444)
52 3my7_A Alcohol dehydrogenase/a 100.0 3E-69 1E-73 598.8 28.8 414 263-706 1-447 (452)
53 4gic_A HDH, histidinol dehydro 95.5 3 0.0001 44.0 30.8 260 354-705 116-400 (423)
54 2rpr_A Flywch-type zinc finger 94.5 0.045 1.5E-06 45.0 5.2 49 55-134 26-74 (87)
55 1kae_A HDH, histidinol dehydro 94.0 7.4 0.00025 41.1 27.5 256 358-705 114-393 (434)
56 1wj2_A Probable WRKY transcrip 86.9 1.6 5.3E-05 34.5 6.3 28 106-133 47-76 (78)
57 2xzm_O RPS13E; ribosome, trans 85.8 2.4 8.3E-05 37.7 7.7 47 145-191 29-96 (153)
58 3u5c_N S27A, YS15, 40S ribosom 85.3 2.7 9.1E-05 37.4 7.6 47 145-191 27-94 (151)
59 2ayd_A WRKY transcription fact 85.0 2.6 8.9E-05 33.1 6.7 29 106-134 44-74 (76)
60 3j20_Q 30S ribosomal protein S 81.8 1.4 4.6E-05 39.7 4.4 35 141-175 23-58 (158)
61 2fiu_A Conserved hypothetical 60.4 22 0.00074 29.4 6.7 44 568-635 33-76 (99)
62 1je8_A Nitrate/nitrite respons 60.0 14 0.00046 29.3 5.2 59 127-193 3-61 (82)
63 1vmd_A MGS, methylglyoxal synt 49.3 16 0.00055 33.8 4.4 120 363-506 21-151 (178)
64 1tc3_C Protein (TC3 transposas 45.7 32 0.0011 23.2 4.8 43 144-193 4-46 (51)
65 1b93_A Protein (methylglyoxal 41.2 35 0.0012 30.7 5.2 114 369-506 12-135 (152)
66 2xw6_A MGS, methylglyoxal synt 39.8 12 0.00042 33.0 1.9 87 380-475 16-111 (134)
67 2ixa_A Alpha-N-acetylgalactosa 39.7 1.6E+02 0.0056 31.2 11.5 85 389-475 36-121 (444)
68 3lo3_A Uncharacterized conserv 38.2 61 0.0021 26.3 5.9 60 552-635 15-75 (94)
69 3lap_A Arginine repressor; arg 36.2 1.5E+02 0.0051 27.1 8.8 39 391-433 108-146 (170)
70 3v42_A Folliculin; tumor suppr 36.1 31 0.001 33.3 4.3 68 385-459 21-88 (226)
71 3ulq_B Transcriptional regulat 35.1 53 0.0018 26.4 5.0 44 143-194 27-70 (90)
72 2lju_A Putative oxidoreductase 33.5 43 0.0015 28.1 4.2 45 12-66 46-90 (108)
73 2yvq_A Carbamoyl-phosphate syn 33.3 39 0.0013 29.9 4.3 63 414-476 60-132 (143)
74 3mwd_B ATP-citrate synthase; A 32.8 4.1E+02 0.014 27.0 13.1 85 392-482 166-264 (334)
75 2ioj_A Hypothetical protein AF 32.2 38 0.0013 29.7 4.0 48 425-472 53-101 (139)
76 3hhl_A RPA0582; alpha-beta-bar 31.9 83 0.0028 27.9 6.2 65 550-635 45-110 (143)
77 2kw0_A CCMH protein; oxidoredu 30.0 70 0.0024 25.9 4.7 33 145-177 40-72 (90)
78 1s7i_A Hypothetical protein PA 29.3 1.2E+02 0.004 26.1 6.5 74 554-636 30-108 (124)
79 2hl7_A Cytochrome C-type bioge 28.8 66 0.0023 25.7 4.4 34 145-178 43-76 (84)
80 2elh_A CG11849-PA, LD40883P; s 27.8 90 0.0031 24.7 5.2 46 143-195 20-65 (87)
81 3u3x_A Oxidoreductase; structu 27.2 2.1E+02 0.0073 29.3 9.5 41 436-476 79-119 (361)
82 3ufx_B Succinyl-COA synthetase 23.6 6.4E+02 0.022 26.2 12.4 44 436-479 292-343 (397)
83 1k78_A Paired box protein PAX5 23.2 1E+02 0.0035 26.9 5.3 53 143-195 88-145 (149)
84 1y5e_A Molybdenum cofactor bio 21.5 89 0.0031 28.4 4.6 53 406-458 29-85 (169)
85 2zfz_A Arginine repressor; DNA 21.2 1E+02 0.0035 24.1 4.2 37 393-433 19-55 (79)
86 2k27_A Paired box protein PAX- 20.8 1.3E+02 0.0043 26.7 5.4 53 143-195 81-138 (159)
87 2l69_A Rossmann 2X3 fold prote 20.7 79 0.0027 25.3 3.3 27 38-64 8-34 (134)
88 1irz_A ARR10-B; helix-turn-hel 20.5 1.7E+02 0.006 21.9 5.0 45 145-193 9-57 (64)
89 1b4b_A Arginine repressor; cor 20.3 99 0.0034 23.6 3.8 37 393-433 11-47 (71)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.3e-100 Score=853.23 Aligned_cols=476 Identities=28% Similarity=0.457 Sum_probs=446.4
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
+.++||||+|+++.++.+++++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|++++++|++++++
T Consensus 6 ~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 85 (490)
T 2wme_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45689999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 389 (732)
|++++++|+|||+.+++. ++..+++.+++++...+...+...+. ..+...+++++|+|||++|+|||||+.+.+++++
T Consensus 86 la~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a 164 (490)
T 2wme_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSA 164 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccc-cCCcceeEEecceeEEEEeccccCcchhhhhhHH
Confidence 999999999999999976 69999999999999887766654432 3456678899999999999999999999999999
Q ss_pred HHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHH-Hhhc
Q 004768 390 IAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYS-RASA 467 (732)
Q Consensus 390 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~-~aa~ 467 (732)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ ++++.|+.||+|++|+||||+.+|+.|++ .+++
T Consensus 165 ~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~ 244 (490)
T 2wme_A 165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS 244 (490)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999975 78999999999999999999999988876 5566
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+|.+++++
T Consensus 245 ~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~ 324 (490)
T 2wme_A 245 SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTN 324 (490)
T ss_dssp HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCC
T ss_pred CCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCc
Confidence 799999999999999999999999999999999999999999999999999999 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 626 (732)
+||++++.+++++.++|++++++|+++++||.....+....|+|++||||.+++++|++++||+||||++|++|+|++||
T Consensus 325 ~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 404 (490)
T 2wme_A 325 FGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEA 404 (490)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHH
T ss_pred cCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHH
Confidence 99999999999999999999999999999998755444457999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 627 i~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++||+.|+|+.
T Consensus 405 i~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~-~~~~~PFGG~k~SG~G--re~G~~gl~~ft~~K~v~i 481 (490)
T 2wme_A 405 IRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE-SPAEMPVGGYKQSGVG--RENGLTTLAHYTRIKSVQV 481 (490)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC-CCTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCC-CCCCCCcccccccccC--chhHHHHHHHhhceeEEEE
Confidence 999999999999999999999999999999999999998643 2355677889999999 6999999999999999998
Q ss_pred eccC
Q 004768 707 QWKD 710 (732)
Q Consensus 707 ~~~~ 710 (732)
++.+
T Consensus 482 ~~g~ 485 (490)
T 2wme_A 482 ELGD 485 (490)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 7644
No 2
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.8e-99 Score=846.51 Aligned_cols=492 Identities=41% Similarity=0.728 Sum_probs=454.2
Q ss_pred ccccccccCCCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHH
Q 004768 219 VMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMF 298 (732)
Q Consensus 219 ~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~ 298 (732)
-++..|.+.++..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+
T Consensus 14 ~~~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~ 93 (521)
T 4e4g_A 14 GTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFM 93 (521)
T ss_dssp ----------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred CchhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 35678999999889999999999987778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCc
Q 004768 299 KFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFD 378 (732)
Q Consensus 299 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n 378 (732)
+++++|+++.++|++++++|+|||..+++.|+..+++.+++++...+...+........+...++.++|+|||++|+|||
T Consensus 94 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN 173 (521)
T 4e4g_A 94 KFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFN 173 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCc
Confidence 99999999999999999999999999999999999999999998777666554433334567888999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHH
Q 004768 379 FPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDV 458 (732)
Q Consensus 379 ~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g 458 (732)
||+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+.+.+.+|+.||+|++|+||||+.+|
T Consensus 174 ~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG 253 (521)
T 4e4g_A 174 FPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIA 253 (521)
T ss_dssp CTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHH
T ss_pred chHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888999999999999999999999
Q ss_pred HHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecC-c-hhhHHHHHHHHhccc
Q 004768 459 ADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGG-I-TPWEDKLVEHAKAIK 536 (732)
Q Consensus 459 ~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~-~-~~f~~~l~~~~~~l~ 536 (732)
+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ + ++|+++|.+++++++
T Consensus 254 ~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 333 (521)
T 4e4g_A 254 RYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLR 333 (521)
T ss_dssp HHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999 7 799999999999999
Q ss_pred ccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeE
Q 004768 537 VNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLL 616 (732)
Q Consensus 537 ~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~ 616 (732)
+|+|.++++++||++++++++++.++|++++++|+++++||.....++...|+|++||||.+++++|++++||+||||++
T Consensus 334 vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 413 (521)
T 4e4g_A 334 IGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLS 413 (521)
T ss_dssp BCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred CCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEE
Confidence 99999999999999999999999999999999999999999754333345799999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHH
Q 004768 617 CMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIH 696 (732)
Q Consensus 617 v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~ 696 (732)
|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.....+..||||+|.||+|+.+++|++|++
T Consensus 414 v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~ 493 (521)
T 4e4g_A 414 VVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIK 493 (521)
T ss_dssp ECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHH
T ss_pred EEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999997654446678889999999965689999999
Q ss_pred hhheeeEEEEeccC
Q 004768 697 FYTQIKTVTQQWKD 710 (732)
Q Consensus 697 ~~~~~k~v~~~~~~ 710 (732)
+|++.|+|..+|.+
T Consensus 494 ~ft~~K~v~~~~~~ 507 (521)
T 4e4g_A 494 FWTRTKTITSRWPS 507 (521)
T ss_dssp HTEEEEEEEECCCC
T ss_pred HhheEEEEEEecCc
Confidence 99999999877643
No 3
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.1e-96 Score=828.32 Aligned_cols=476 Identities=25% Similarity=0.433 Sum_probs=447.0
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhh--HhhcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF--SSWRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~--~~w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++|| ..|+.++..+|.++|++++++|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR 111 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence 4578999999998777899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
++|++++++|+|||..+++.|+..+++.+++++...+...+...+....+...++.++|+|||++|+|||||+.+.++++
T Consensus 112 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 191 (520)
T 3ed6_A 112 EALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKI 191 (520)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999988776555443322245677889999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++.
T Consensus 192 apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~ 271 (520)
T 3ed6_A 192 APALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAAN 271 (520)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999964 789999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
+++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.|++++
T Consensus 272 ~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~ 351 (520)
T 3ed6_A 272 NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTE 351 (520)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCS
T ss_pred cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCc
Confidence 999999999999999999999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 626 (732)
+||++++++++++.++|++++++|+++++||.....+....|+|++||||.+++++|++++||+||||++|++|+|++||
T Consensus 352 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 431 (520)
T 3ed6_A 352 MGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEA 431 (520)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999997532112247999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 627 i~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|+||+| +++|++|+++||+.|+|..
T Consensus 432 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--re~G~~gl~~~t~~k~v~~ 508 (520)
T 3ed6_A 432 IQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY-FAQAPWGGYKQSGIG--RELGKEGLEEYLVSKHILT 508 (520)
T ss_dssp HHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC-CCCCCcCCcCcCcCC--ccchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999999999999997644 467788899999999 6999999999999999987
Q ss_pred ecc
Q 004768 707 QWK 709 (732)
Q Consensus 707 ~~~ 709 (732)
++.
T Consensus 509 ~~~ 511 (520)
T 3ed6_A 509 NTN 511 (520)
T ss_dssp ESS
T ss_pred cCC
Confidence 753
No 4
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.6e-96 Score=822.07 Aligned_cols=469 Identities=26% Similarity=0.424 Sum_probs=443.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
|++++++|+|||..+++.|+..+++.+++++...+...+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 171 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP 171 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence 99999999999999999999999999999998876655544433334567889999999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 469 (732)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~ 251 (484)
T 3ifg_A 172 ALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTV 251 (484)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999975 78999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcC
Q 004768 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLG 548 (732)
Q Consensus 470 ~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~g 548 (732)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++++++|
T Consensus 252 k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 331 (484)
T 3ifg_A 252 KKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLG 331 (484)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999998 799999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHH
Q 004768 549 PVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIE 628 (732)
Q Consensus 549 pli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 628 (732)
|++++++++++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|||+
T Consensus 332 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (484)
T 3ifg_A 332 PLINEAAVKKVESHIADALAKGASLMTGGKRH----ALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407 (484)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEECCCcc----CCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999752 12699999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 629 IVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 629 ~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
++|+++|||+++|||+|.+.+++++++|++|+|+||++.. ..+..||||+|+||+| +++|++|+++|++.|+|+.
T Consensus 408 ~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~-~~~~~PfGG~k~SG~G--r~~g~~gl~~~~~~k~v~~ 482 (484)
T 3ifg_A 408 LANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLI-SNEVAPFGGVKQSGLG--REGSHYGIDDYVVIKYLCV 482 (484)
T ss_dssp HHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCC-CCSSSCBCCEETTEEC--CBSTTTTTGGGEEEEEEEE
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCcCCcCcCcCC--CCchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999999999998643 3567788899999999 6899999999999999874
No 5
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.6e-96 Score=823.98 Aligned_cols=469 Identities=29% Similarity=0.456 Sum_probs=443.7
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999987778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
|+++++.|+|||..+++.|+..+++.+++++...+...+...+....+...++.++|+|||++|+|||||+...++++++
T Consensus 112 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ 191 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAP 191 (504)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999998877655554433334567888999999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 469 (732)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 192 ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~l 271 (504)
T 3ek1_A 192 ALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTI 271 (504)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGT
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhc
Confidence 99999999999999999999999999999999999999999875 78999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcC
Q 004768 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLG 548 (732)
Q Consensus 470 ~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~g 548 (732)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++++++|
T Consensus 272 k~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 351 (504)
T 3ek1_A 272 KRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIG 351 (504)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccc
Confidence 9999999999999999999999999999999999999999999999999998 799999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHH
Q 004768 549 PVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIE 628 (732)
Q Consensus 549 pli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 628 (732)
|++++++++++.++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+
T Consensus 352 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 425 (504)
T 3ek1_A 352 PMIEEKAITKVKAHIEDAVSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIA 425 (504)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999974 2589999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 629 IVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 629 ~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
++|+++|||+++|||+|.+.+.++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++|++.|+|+..+
T Consensus 426 ~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 426 QANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLI-SNEVAPFGGVKQSGLG--REGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCC-CCSSSCBCCSGGGEES--CBSTTTSGGGGEEEEEEEEEC
T ss_pred HHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC-CCCCCCcCCcCcCcCC--CCCcHHHHHHhhceEEEEEec
Confidence 9999999999999999999999999999999999998753 3467788899999999 689999999999999998653
No 6
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=2.8e-96 Score=823.60 Aligned_cols=480 Identities=26% Similarity=0.427 Sum_probs=446.7
Q ss_pred CCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 228 NPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 228 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
+...+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 88 (497)
T 3k2w_A 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIREN 88 (497)
T ss_dssp CCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTT
T ss_pred cccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 44567899999999987778999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
.++|+++++.|+|||..+++.|+..+++.+++++...+...+...+....+...++.++|+|||++|+|||||+...+++
T Consensus 89 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 168 (497)
T 3k2w_A 89 KHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRK 168 (497)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999998776665554433334667888999999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++
T Consensus 169 ~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa 248 (497)
T 3k2w_A 169 IGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA 248 (497)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999965 78999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 467 ~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
+++||+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++++
T Consensus 249 ~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 328 (497)
T 3k2w_A 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADS 328 (497)
T ss_dssp TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998 799999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++||++++++++++.++|++++++|+++++||.....++.+.|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 329 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 408 (497)
T 3k2w_A 329 QMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQ 408 (497)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHH
T ss_pred ccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHH
Confidence 99999999999999999999999999999999731111223689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|+||+| +++|++|+++|++.|+|.
T Consensus 409 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~ft~~k~v~ 485 (497)
T 3k2w_A 409 AIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGE-QHQGFHNGWKQSGFG--GEDGKFGLEQYLEKKTVY 485 (497)
T ss_dssp HHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC-CTTSCBCCEETSEES--CBSHHHHHHTTEEEEEEE
T ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCCcCCcCCCcCC--ccchHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999999997644 367788899999999 699999999999999998
Q ss_pred EeccC
Q 004768 706 QQWKD 710 (732)
Q Consensus 706 ~~~~~ 710 (732)
.++..
T Consensus 486 ~~~~~ 490 (497)
T 3k2w_A 486 INEAE 490 (497)
T ss_dssp EECCC
T ss_pred EEccc
Confidence 77643
No 7
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=5.4e-96 Score=820.16 Aligned_cols=471 Identities=24% Similarity=0.411 Sum_probs=444.9
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
...++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.+
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45678999999998777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEe-ecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIR-EPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|++++++|+|||..+++.|+..+++.+++++...+...+...+. ..+...++.+ +|+|||++|+|||||+.+.++++
T Consensus 90 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 168 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPE-KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKL 168 (506)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSC-CGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-CCCceeeEeecccceEEEEECCCchHHHHHHHHH
Confidence 999999999999999999999999999999999887766654332 2355678888 99999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 169 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~ 248 (506)
T 3rh9_A 169 SAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAE 248 (506)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTT
T ss_pred HHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999965 788999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
+++|+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.+++++
T Consensus 249 ~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 328 (506)
T 3rh9_A 249 QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGID 328 (506)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCS
T ss_pred cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCc
Confidence 999999999999999999999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 626 (732)
+||++++++++++.++|++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|++||
T Consensus 329 ~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 405 (506)
T 3rh9_A 329 IGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAE---LGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEV 405 (506)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGG---CCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCC---CCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999997521 126899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 627 i~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||.|+||+| +++|++|+++|++.|+|..
T Consensus 406 i~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~ft~~K~v~~ 482 (506)
T 3rh9_A 406 IDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGP-TPEAPFGGMKASGIG--REGGLEGLFEFVEAQTVPR 482 (506)
T ss_dssp HHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHTTTEEEEEEEE
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCccCcCcCcCC--cCccHHHHHHhcceEEEEE
Confidence 9999999999999999999999999999999999999997643 356788899999999 6999999999999999986
Q ss_pred e
Q 004768 707 Q 707 (732)
Q Consensus 707 ~ 707 (732)
+
T Consensus 483 ~ 483 (506)
T 3rh9_A 483 G 483 (506)
T ss_dssp C
T ss_pred c
Confidence 5
No 8
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=3.2e-95 Score=816.12 Aligned_cols=475 Identities=28% Similarity=0.404 Sum_probs=444.4
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH-----hhcCCCHHHHHHHHHHHHHHH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS-----SWRNTPVTNRQRIMFKFQELI 304 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~iL~~~a~~l 304 (732)
...++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|++++++|
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l 85 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV 85 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence 345789999999987778999999999999999999999999999999999999 999999999999999999999
Q ss_pred HhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCcee-c--ccCCCceeEEEeecceeEEEecCCchhh
Q 004768 305 RRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV-S--NISNGVDTYSIREPLGVCAGICSFDFPA 381 (732)
Q Consensus 305 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 381 (732)
+++.++|++++++|+|||..+++.|+..+++.+++++...+...+... . ....+...++.++|+|||++|+|||||+
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 165 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPM 165 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHH
Confidence 999999999999999999999999999999999999987765544321 1 1123556788999999999999999999
Q ss_pred hhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHH
Q 004768 382 MTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVAD 460 (732)
Q Consensus 382 ~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~ 460 (732)
.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.
T Consensus 166 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~ 245 (503)
T 3iwj_A 166 LMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSK 245 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999976 78899999999999999999999999
Q ss_pred HHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccC
Q 004768 461 IYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNA 539 (732)
Q Consensus 461 i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~ 539 (732)
|++.++.+++|+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+
T Consensus 246 i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 325 (503)
T 3iwj_A 246 IMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISD 325 (503)
T ss_dssp HHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999998 799999999999999999
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEe
Q 004768 540 GTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQ 619 (732)
Q Consensus 540 ~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~ 619 (732)
|.++++++||++++++++++.++|++++++|+++++||.... ....|+|++|||+.+++++|++++||+||||++|++
T Consensus 326 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~--~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 403 (503)
T 3iwj_A 326 PLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPE--HLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKT 403 (503)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCT--TCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCc--cCCCCceeCCeeeecCCCCchhhCceeeCceEEEEE
Confidence 999999999999999999999999999999999999997521 124799999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhh
Q 004768 620 AESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYT 699 (732)
Q Consensus 620 ~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~ 699 (732)
|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|.||+| +++|++|+++|+
T Consensus 404 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~g~~~f~ 480 (503)
T 3iwj_A 404 FSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQP-CFTQAPWGGVKRSGFG--RELGEWGLDNYL 480 (503)
T ss_dssp ESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCC-CCTTSCBCCSGGGEEC--CBSHHHHHHTTE
T ss_pred eCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCcCCcCcccCC--CcchHHHHHHhh
Confidence 9999999999999999999999999999999999999999999998643 3466788899999999 699999999999
Q ss_pred eeeEEEEecc
Q 004768 700 QIKTVTQQWK 709 (732)
Q Consensus 700 ~~k~v~~~~~ 709 (732)
+.|+|..++.
T Consensus 481 ~~k~v~~~~~ 490 (503)
T 3iwj_A 481 SVKQVTQYIS 490 (503)
T ss_dssp EEEEEEEECC
T ss_pred CeEEEEEeCC
Confidence 9999987753
No 9
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=6.8e-96 Score=818.80 Aligned_cols=469 Identities=23% Similarity=0.390 Sum_probs=442.7
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
..+++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.+
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEAD 102 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 35689999999998776 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|+++++.|+|||..++ ..|+..+++.+++++...+...+...+....+...++.++|+|||++|+|||||+.+.++++
T Consensus 103 ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 182 (498)
T 4f3x_A 103 EFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKL 182 (498)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHH
Confidence 99999999999999999 88999999999999988776555433322345678899999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 183 a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~ 261 (498)
T 4f3x_A 183 APAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAK 261 (498)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 9999999999965 689999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.+++++
T Consensus 262 ~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~ 341 (498)
T 4f3x_A 262 TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENE 341 (498)
T ss_dssp TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCS
T ss_pred hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCc
Confidence 999999999999999999999999999999999999999999999999999999 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCC-EEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESGA-KLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~Ga-~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
+||++++.+++++.++|++++++|+ ++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 342 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 417 (498)
T 4f3x_A 342 IGPLISRRQRDRVASFVERAADQKHIEITTGGRTG----SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDD 417 (498)
T ss_dssp SCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBC----CSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSC
T ss_pred cccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccC----CCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHH
Confidence 9999999999999999999999999 999999752 24799999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.+.++++++++|+|+||++... .+..||||+|+||+| +++|++|+++|++.|+|.
T Consensus 418 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~~l~~~t~~k~v~ 494 (498)
T 4f3x_A 418 AVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFML-TNEMPHGGIKQSGYG--KDMSVYALEDYTAVRHIM 494 (498)
T ss_dssp HHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC-CTTSCBCCSGGGEEC--CBSHHHHHHHTEEEEEEE
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCcCCcCcCCcC--ccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999997643 377788899999999 699999999999999997
Q ss_pred Ee
Q 004768 706 QQ 707 (732)
Q Consensus 706 ~~ 707 (732)
..
T Consensus 495 ~~ 496 (498)
T 4f3x_A 495 IN 496 (498)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 10
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.5e-95 Score=817.67 Aligned_cols=472 Identities=30% Similarity=0.453 Sum_probs=445.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhh--HhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAF--SSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~--~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
.+++||||+|+.+.++.+++++||+| |+++++++.++.+|+++|+++|++|| ..|+.++.++|.++|++++++|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 56899999999987778999999999 99999999999999999999999999 7899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
.++|++++++|+|||..++..|+..+++.++++++..+...+...+....+...++.++|+|||++|+|||||+...+++
T Consensus 102 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 181 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASER 181 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999998877665544432224566888999999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|. .+.+++|+.||+|++|+||||+.+|+.|++.++
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 261 (528)
T 3u4j_A 182 VPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA 261 (528)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999995 478999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 467 ~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
+++||+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+|.++++
T Consensus 262 ~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 341 (528)
T 3u4j_A 262 RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERT 341 (528)
T ss_dssp TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTC
T ss_pred hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999999998 799999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++||++++++++++.++|++++++|+++++||.... + ..|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 342 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~--~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 418 (528)
T 3u4j_A 342 KIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIG--R-EAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADE 418 (528)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEEC--T-TTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred ccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC--C-CCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHH
Confidence 999999999999999999999999999999997531 1 1699999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|+||+| +++|++|+++|++.|+|.
T Consensus 419 Ai~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v~ 495 (528)
T 3u4j_A 419 AVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDG-TPELPIGGYKKSGLG--RELGRYGFDEYSQFKGVH 495 (528)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-CTTSCBCCSGGGEES--CBSTTHHHHHTEEEEEEE
T ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCcCCcCcCCCC--cCchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999997533 567788899999999 699999999999999998
Q ss_pred Eec
Q 004768 706 QQW 708 (732)
Q Consensus 706 ~~~ 708 (732)
...
T Consensus 496 ~~~ 498 (528)
T 3u4j_A 496 VTL 498 (528)
T ss_dssp EES
T ss_pred EeC
Confidence 764
No 11
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=3.1e-95 Score=814.79 Aligned_cols=467 Identities=26% Similarity=0.399 Sum_probs=440.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||..|+.++..+|.++|++++++|+++.++
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 90 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEI 90 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999987778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccC-C----CceeEEEeecceeEEEecCCchhhhhHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNIS-N----GVDTYSIREPLGVCAGICSFDFPAMTPL 385 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 385 (732)
|+++++.|+|||..+++.|+..+++.+++++...+...+....... . +...++.++|+|||++|+|||||+.+.+
T Consensus 91 la~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 170 (505)
T 3prl_A 91 IGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAA 170 (505)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHH
Confidence 9999999999999999999999999999999887766554433211 2 3456889999999999999999999999
Q ss_pred HHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHH
Q 004768 386 WMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSR 464 (732)
Q Consensus 386 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 464 (732)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.
T Consensus 171 ~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~ 250 (505)
T 3prl_A 171 AKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEK 250 (505)
T ss_dssp HHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999965 789999999999999999999999999998
Q ss_pred hhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 465 ASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 465 aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|. +
T Consensus 251 aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~ 327 (505)
T 3prl_A 251 AK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE-D 327 (505)
T ss_dssp CC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT-T
T ss_pred cc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCC-C
Confidence 87 89999999999999999999999999999999999999999999999999998 79999999999999999999 9
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCH
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESI 623 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~ 623 (732)
++++||++++++++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 328 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~-------~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~ 400 (505)
T 3prl_A 328 DADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR-------QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400 (505)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred cCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC-------CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCH
Confidence 999999999999999999999999999999999963 5899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeE
Q 004768 624 DEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKT 703 (732)
Q Consensus 624 ~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~ 703 (732)
+|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.....+..||||+|+||+| +++|++|+++|++.|+
T Consensus 401 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~G--r~~g~~~~~~f~~~k~ 478 (505)
T 3prl_A 401 NEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLG--VQGIKPSLLSMTRERV 478 (505)
T ss_dssp HHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEES--CBSHHHHHHHTEEEEE
T ss_pred HHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCC--cCccHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999976544567788899999999 6999999999999999
Q ss_pred EEEecc
Q 004768 704 VTQQWK 709 (732)
Q Consensus 704 v~~~~~ 709 (732)
|..++.
T Consensus 479 v~~~~~ 484 (505)
T 3prl_A 479 TVLNLA 484 (505)
T ss_dssp EEEEC-
T ss_pred EEEeCC
Confidence 987753
No 12
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.3e-95 Score=819.09 Aligned_cols=473 Identities=26% Similarity=0.433 Sum_probs=443.9
Q ss_pred CCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 228 NPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 228 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
++..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 90 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRER 90 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence 44567899999999887788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHh----hcCceecccCCCceeEEEeecceeEEEecCCchhhhh
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATL----QIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMT 383 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 383 (732)
.++|++++++|+|||..++ |+..+++.+++++...+. ..+...+. ..+. .++.++|+|||++|+|||||+.+
T Consensus 91 ~~ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~ 166 (517)
T 3r31_A 91 NDALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQI 166 (517)
T ss_dssp HHHHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcchHHH
Confidence 9999999999999999999 999999999999988776 55554432 2345 88899999999999999999999
Q ss_pred HHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHH
Q 004768 384 PLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYS 463 (732)
Q Consensus 384 ~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 463 (732)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+.+.+++|+.||+|++|+||||+.+|+.|++
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 246 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAA 246 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996689999999999999999999999999999
Q ss_pred HhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCC
Q 004768 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTE 542 (732)
Q Consensus 464 ~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~ 542 (732)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.+
T Consensus 247 ~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 326 (517)
T 3r31_A 247 AAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLD 326 (517)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred HhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999998 799999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCC
Q 004768 543 SNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES 622 (732)
Q Consensus 543 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~ 622 (732)
+++++||++++++++++.++|++++++|+++++|| .........|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 327 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 405 (517)
T 3r31_A 327 YATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDD 405 (517)
T ss_dssp TTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECC
T ss_pred cCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCC
Confidence 99999999999999999999999999999999999 31111124799999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheee
Q 004768 623 IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIK 702 (732)
Q Consensus 623 ~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k 702 (732)
++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++|++.|
T Consensus 406 ~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K 482 (517)
T 3r31_A 406 EDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNL-CPVEIPFGGSKQSGFG--RENSAAALEHYSELK 482 (517)
T ss_dssp HHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCC-CCTTSCBCCEETTEEC--CBSTGGGGGGSEEEE
T ss_pred HHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCC-CCCCCCcCCcCcCCCC--cCchHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999999753 3467788889999999 689999999999999
Q ss_pred EEEEec
Q 004768 703 TVTQQW 708 (732)
Q Consensus 703 ~v~~~~ 708 (732)
+|...+
T Consensus 483 ~v~~~~ 488 (517)
T 3r31_A 483 TVYVST 488 (517)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 998764
No 13
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=3.6e-95 Score=815.61 Aligned_cols=469 Identities=25% Similarity=0.424 Sum_probs=439.5
Q ss_pred CcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--hhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 233 PNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 233 ~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.++
T Consensus 38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 117 (517)
T 2o2p_A 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE 117 (517)
T ss_dssp SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876667899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceeccc---CCCceeEEEeecceeEEEecCCchhhhhHHH
Q 004768 311 LAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNI---SNGVDTYSIREPLGVCAGICSFDFPAMTPLW 386 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 386 (732)
|++++++|+|||..+++ .|+..+++.+++++...+...+...+.. ..+...++.++|+|||++|+|||||+...++
T Consensus 118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 197 (517)
T 2o2p_A 118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 197 (517)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence 99999999999999998 8999999999999988776655443321 2233568899999999999999999999999
Q ss_pred HHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHh
Q 004768 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRA 465 (732)
Q Consensus 387 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 465 (732)
++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|.+ +.+++|+.||+|++|+||||+.+|+.|++.+
T Consensus 198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a 277 (517)
T 2o2p_A 198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999965 6899999999999999999999999999999
Q ss_pred h-cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 466 S-AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 466 a-~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
+ +++||+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++
T Consensus 278 a~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~ 357 (517)
T 2o2p_A 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLER 357 (517)
T ss_dssp HHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTST
T ss_pred HHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9 8999999999999999999999999999999999999999999999999999998 7999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCC-
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES- 622 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~- 622 (732)
++++||++++++++++.++|++++++|+++++||... ...|+|++||||.+++++|++++||+||||++|++|+|
T Consensus 358 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 433 (517)
T 2o2p_A 358 DTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV----PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433 (517)
T ss_dssp TCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTT
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccC----CCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCC
Confidence 9999999999999999999999999999999999752 13689999999999999999999999999999999999
Q ss_pred -HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhee
Q 004768 623 -IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQI 701 (732)
Q Consensus 623 -~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~ 701 (732)
++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|.+|+++|++.
T Consensus 434 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G--r~~G~~~l~~~~~~ 510 (517)
T 2o2p_A 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNK-TDVAAPFGGFKQSGFG--KDLGEAALNEYLRI 510 (517)
T ss_dssp CSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSC-CCTTSCBCCCGGGEEC--CBSHHHHHHTTEEE
T ss_pred CHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCC-CCCCCCcCCcCcCCcC--ccChHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999998643 3456778889999999 69999999999999
Q ss_pred eEEEEec
Q 004768 702 KTVTQQW 708 (732)
Q Consensus 702 k~v~~~~ 708 (732)
|+|..+|
T Consensus 511 k~v~~~~ 517 (517)
T 2o2p_A 511 KTVTFEY 517 (517)
T ss_dssp EEEEEEC
T ss_pred eEEEeeC
Confidence 9997653
No 14
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=7.6e-95 Score=812.19 Aligned_cols=479 Identities=28% Similarity=0.464 Sum_probs=444.6
Q ss_pred cCCCCCCCcccCCeeeeCCCCCe-EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHH
Q 004768 226 QRNPPRVPNLIGGRFVDSKSLTS-IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELI 304 (732)
Q Consensus 226 ~~~~~~~~~~I~g~~~~~~~~~~-~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l 304 (732)
...+..+++||||+|+.+.++.+ ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|
T Consensus 14 ~~~~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l 93 (503)
T 1a4s_A 14 SVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARII 93 (503)
T ss_dssp TCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred CccccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHH
Confidence 33445577899999998866677 99999999999999999999999999999999999999999999999999999999
Q ss_pred HhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhH
Q 004768 305 RRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTP 384 (732)
Q Consensus 305 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 384 (732)
+++.++|++++++|+|||..++..|+..+++.++++++..+...+...... .+...++.++|+|||++|+|||||+...
T Consensus 94 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 172 (503)
T 1a4s_A 94 RERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIA 172 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHH
Confidence 999999999999999999999999999999999999988776555433322 2345688999999999999999999999
Q ss_pred HHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHH
Q 004768 385 LWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSR 464 (732)
Q Consensus 385 ~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 464 (732)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.++.+++|+.||+|++|+||||+.+|+.|++.
T Consensus 173 ~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 252 (503)
T 1a4s_A 173 AWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEM 252 (503)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999955788999999999999999999999999999
Q ss_pred hhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 465 ASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 465 aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++
T Consensus 253 aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 332 (503)
T 1a4s_A 253 SAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp HHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 999999999999999999999999999999999999999999999999999999998 7999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCC--CCCCceEeeEEEecCCCCCcccccccccceeEeEecC
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPG--YENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE 621 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~--~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~ 621 (732)
++++||++++++++++.++|++++++|+++++||.....++ ...|+|++||||.+++++|++++||+||||++|++|+
T Consensus 333 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (503)
T 1a4s_A 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412 (503)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecC
Confidence 99999999999999999999999999999999997521011 0358999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhee
Q 004768 622 SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQI 701 (732)
Q Consensus 622 ~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~ 701 (732)
|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++|++.
T Consensus 413 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~f~~~ 489 (503)
T 1a4s_A 413 TEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI-SPVEVPFGGYKMSGFG--RENGQATVDYYSQL 489 (503)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC-CCTTSCBCCSGGGEEC--CBSTTGGGGGSEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCC-CCCCCCCCCcCCCCCC--ccchHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999998754 3456678889999999 69999999999999
Q ss_pred eEEEEec
Q 004768 702 KTVTQQW 708 (732)
Q Consensus 702 k~v~~~~ 708 (732)
|+|..++
T Consensus 490 k~v~~~~ 496 (503)
T 1a4s_A 490 KTVIVEM 496 (503)
T ss_dssp EEEEECC
T ss_pred eEEEEcc
Confidence 9998764
No 15
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.7e-94 Score=807.64 Aligned_cols=470 Identities=27% Similarity=0.436 Sum_probs=443.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999987778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
|+++++.|+|||..+++.|+..+++.+++++.......+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999988766555544333334567788999999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 469 (732)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~ 248 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 248 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999964 78999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcC
Q 004768 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLG 548 (732)
Q Consensus 470 ~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~g 548 (732)
+|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++|
T Consensus 249 ~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~g 328 (481)
T 3jz4_A 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIG 328 (481)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccc
Confidence 9999999999999999999999999999999999999999999999999998 799999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHH
Q 004768 549 PVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIE 628 (732)
Q Consensus 549 pli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 628 (732)
|++++++++++.++|++++++|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|++|||+
T Consensus 329 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 404 (481)
T 3jz4_A 329 PLIDEKAVAKVEEHIADALEKGARVVCGGKAH----ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA 404 (481)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCccc----CCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence 99999999999999999999999999999752 23589999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 629 IVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 629 ~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++||+.|+|+..
T Consensus 405 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 405 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII-SNEVAPFGGIKASGLG--REGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCC-CCSSSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCC-CCCCCCcCCcccCcCC--CCchHHHHHHhhceeEEEEe
Confidence 9999999999999999999999999999999999999754 3467788899999999 69999999999999998753
No 16
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.9e-94 Score=809.82 Aligned_cols=473 Identities=28% Similarity=0.420 Sum_probs=441.1
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++|
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADEL 106 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998876778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHH
Q 004768 312 AMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA 391 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 391 (732)
++++++|+|||..+++.|+..+++.++++++..+...+...+....+...++.++|+|||++|+|||||+.+.++++++|
T Consensus 107 a~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 186 (515)
T 2d4e_A 107 AVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPA 186 (515)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHH
Confidence 99999999999999999999999999999987766656543322335567889999999999999999999999999999
Q ss_pred hhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCC
Q 004768 392 VTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470 (732)
Q Consensus 392 LaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 470 (732)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++++++
T Consensus 187 LaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~ 266 (515)
T 2d4e_A 187 LAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLK 266 (515)
T ss_dssp HHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTC
T ss_pred HHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999999999999999999965 789999999999999999999999999999999999
Q ss_pred cEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCC
Q 004768 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGP 549 (732)
Q Consensus 471 ~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gp 549 (732)
|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||
T Consensus 267 ~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 346 (515)
T 2d4e_A 267 RLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGP 346 (515)
T ss_dssp EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCC
T ss_pred ceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCC
Confidence 999999999999999999999999999999999999999999999999998 7999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEecCcccCC----CCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 550 VISKQEKERMCRLIQVDTESGAKLLLDGRNILV----PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 550 li~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~----~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++++++++++.++|++++++|+++++||..... +....|+|++|||+.+ +++|++++||+||||++|++|+|++|
T Consensus 347 li~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~de 425 (515)
T 2d4e_A 347 LIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEE 425 (515)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHH
Confidence 999999999999999999999999999975210 0112589999999999 99999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++|++.|+|.
T Consensus 426 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~~~~~K~v~ 502 (515)
T 2d4e_A 426 ALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV-RHLPTPFGGVKGSGDR--REGGTYALDFYTDLKTIA 502 (515)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC-CCTTSCBCCSGGGBCS--CBSHHHHHHHHEEEEEEE
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC-CCCCCCCCCcCCCCCC--ccchHHHHHHhCceeEEE
Confidence 9999999999999999999999999999999999999998643 3456677888999999 689999999999999998
Q ss_pred Eec
Q 004768 706 QQW 708 (732)
Q Consensus 706 ~~~ 708 (732)
.++
T Consensus 503 ~~~ 505 (515)
T 2d4e_A 503 LPL 505 (515)
T ss_dssp EES
T ss_pred EcC
Confidence 765
No 17
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=2e-94 Score=806.72 Aligned_cols=468 Identities=25% Similarity=0.382 Sum_probs=435.0
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
...++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.+
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 103 (497)
T 3i44_A 24 NKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSS 103 (497)
T ss_dssp EECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34678999999998877899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEE-eecceeEEEecCCchhhhhHHHH
Q 004768 310 KLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSI-REPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
+|+++++.|+|||..+++ .|+..+++.+++++............ ..+...++. ++|+|||++|+|||||+...+++
T Consensus 104 ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (497)
T 3i44_A 104 DMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL--IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLK 181 (497)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES--STTCSSCEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--cCCceeEEEeecCceEEEEECCCcchHHHHHHH
Confidence 999999999999999998 79999999999988765543322111 123446677 99999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa 261 (497)
T 3i44_A 182 VIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS 261 (497)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999965 78999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 467 ~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
+++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++++
T Consensus 262 ~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~ 340 (497)
T 3i44_A 262 NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGN 340 (497)
T ss_dssp TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSS
T ss_pred hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 99999999999999999999999 9999999999999999999999999999998 799999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++||+++++++++++++|++++++|+++++||.... .+...|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 341 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~-~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 419 (497)
T 3i44_A 341 HIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLP-MGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDE 419 (497)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-CcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHH
Confidence 999999999999999999999999999999994211 1123699999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.++++++++++|+|+||.. ...+..||||+|.||+| +++|++|+++|++.|+|.
T Consensus 420 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~--~~~~~~PfGG~k~SG~G--r~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 420 AVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGH--ELPGGSYFGGVKFSGRA--REGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETTC--CCCTTCCBCCSGGGCCC--CBSHHHHHHTTEEEEEES
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECCC--CCCCCCCcCCcCcCcCC--ccchHHHHHHhcceeEEE
Confidence 99999999999999999999999999999999999999952 23456678889999999 689999999999999874
No 18
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=5.2e-94 Score=804.13 Aligned_cols=470 Identities=32% Similarity=0.442 Sum_probs=439.7
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---hhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS---SWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 34689999999886667899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLW 386 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 386 (732)
.++|++++++|+|||..++. .|+..+++.+++++...+...+..... ..+...++.++|+|||++|+|||||+...++
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 178 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLW 178 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHH
Confidence 99999999999999999874 699999999999998877665553332 3345668899999999999999999999999
Q ss_pred HHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHh
Q 004768 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRA 465 (732)
Q Consensus 387 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 465 (732)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ +.+++|+.||+|++|+||||+.+|+.|++.+
T Consensus 179 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~a 258 (501)
T 1bxs_A 179 KIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAA 258 (501)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999954 7899999999999999999999999999999
Q ss_pred h-cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 466 S-AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 466 a-~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
+ +++||+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++
T Consensus 259 a~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 338 (501)
T 1bxs_A 259 GKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTP 338 (501)
T ss_dssp HHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTST
T ss_pred hhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCccc
Confidence 9 9999999999999999999999999999999999999999999999999999998 7999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCH
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESI 623 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~ 623 (732)
++++||+++++++++++++|++++++|+++++||... ...|+|++||||.+++++|++++||+||||++|++|+|+
T Consensus 339 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (501)
T 1bxs_A 339 GVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 414 (501)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCH
Confidence 9999999999999999999999999999999998752 135899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeE
Q 004768 624 DEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKT 703 (732)
Q Consensus 624 ~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~ 703 (732)
+|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|.||+| +++|++|+++|++.|+
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~pfGG~k~SG~G--~~~G~~~l~~f~~~K~ 491 (501)
T 1bxs_A 415 DDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV-SAQCPFGGFKMSGNG--RELGEYGFHEYTEVKT 491 (501)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCC-CCCCCCCCcCcCCcC--ccchHHHHHHhhCeeE
Confidence 9999999999999999999999999999999999999999986532 355677788999999 6899999999999999
Q ss_pred EEEec
Q 004768 704 VTQQW 708 (732)
Q Consensus 704 v~~~~ 708 (732)
|..++
T Consensus 492 v~~~~ 496 (501)
T 1bxs_A 492 VTIKI 496 (501)
T ss_dssp EEEEC
T ss_pred EEEcc
Confidence 98764
No 19
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=2.3e-94 Score=806.15 Aligned_cols=472 Identities=28% Similarity=0.428 Sum_probs=441.8
Q ss_pred CCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 229 ~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
+..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 4 PVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp CEECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 44567899999998766678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
++|++++++|+|||..+++.|+..+++.+++++...+...+........+...++.++|+|||++|+|||||+...++++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 163 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKM 163 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHH
Confidence 99999999999999999999999999999999887665555543322234567889999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 164 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~ 243 (479)
T 2imp_A 164 APALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243 (479)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999975 689999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCC-CCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTE-SNA 545 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~-~~~ 545 (732)
+++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+ +++
T Consensus 244 ~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 323 (479)
T 2imp_A 244 NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDI 323 (479)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSC
T ss_pred cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCC
Confidence 999999999999999999999999999999999999999999999999999998 799999999999999999999 999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++|||+++.+++++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 324 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~e 399 (479)
T 2imp_A 324 AMGPLINAAALERVEQKVARAVEEGARVAFGGKAV----EGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLED 399 (479)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCC----CSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCccc----CCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHH
Confidence 99999999999999999999999999999999742 12589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|+||+| +++|++|+++|++.|+|.
T Consensus 400 Ai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~v~ 476 (479)
T 2imp_A 400 AISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE-AMQGFHAGWRKSGIG--GADGKHGLHEYLQTQVVY 476 (479)
T ss_dssp HHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC-CTTSCBCCEETTEES--CBSHHHHHHTTEEEEEEE
T ss_pred HHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC-CCCCCCCCCCCCCCC--CCchHHHHHHhcCeeEEE
Confidence 99999999999999999999999999999999999999987643 466778888999999 699999999999999987
Q ss_pred Ee
Q 004768 706 QQ 707 (732)
Q Consensus 706 ~~ 707 (732)
.+
T Consensus 477 ~~ 478 (479)
T 2imp_A 477 LQ 478 (479)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 20
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.2e-94 Score=806.83 Aligned_cols=475 Identities=40% Similarity=0.695 Sum_probs=443.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
++++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 84 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEE 84 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999876677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
|++++++|+|||..+++.|+..+++.+++++...+...+........+...++.++|+|||++|+|||||+.+.++++++
T Consensus 85 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 164 (486)
T 1t90_A 85 LAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPM 164 (486)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHH
Confidence 99999999999999999999999999999987666655554332233556788999999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 470 (732)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+.+.+.+|+.||+|++|+||||+.+|+.|++.++++++
T Consensus 165 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~ 244 (486)
T 1t90_A 165 AIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLK 244 (486)
T ss_dssp HHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999977889999999999999999999999999999999999
Q ss_pred cEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCce-eEEecCchhhHHHHHHHHhcccccCCCCCCCCcCC
Q 004768 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTT-VVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGP 549 (732)
Q Consensus 471 ~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~-v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gp 549 (732)
|+++|||||||+||++|||++.|++.+++++|.|+||.|+++++ |||+++.++|+++|.++++++++|+|.++++++||
T Consensus 245 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~~d~f~~~l~~~~~~~~vG~~~~~~~~~gp 324 (486)
T 1t90_A 245 RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGP 324 (486)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCC
T ss_pred cEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCCHHHHHHHHHHHHHhcccCCCCccCCccCC
Confidence 99999999999999999999999999999999999999999999 99998844899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHH
Q 004768 550 VISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEI 629 (732)
Q Consensus 550 li~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 629 (732)
++++++++++.+++++++++|+++++||... +...|+|++|||+.+++++|++++||+||||++|++|+|++|||++
T Consensus 325 li~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~---~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~ 401 (486)
T 1t90_A 325 VIREDNKKRTLSYIEKGLEEGARLVCDGREN---VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEI 401 (486)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTCEEEECSSSS---CCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEeCCccC---CCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999742 2236899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 630 VNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 630 ~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
+|+++|||+++|||+|.+.++++++++++|+|+||++.....+..||||+|.||+|.++++|++|+++|++.|+|..+|
T Consensus 402 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 402 ANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp HHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred HhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 9999999999999999999999999999999999986543345677888999999965699999999999999998765
No 21
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-94 Score=807.87 Aligned_cols=471 Identities=27% Similarity=0.401 Sum_probs=440.7
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--hhcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++++
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999886667899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 309 DKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
++|++++++|+|||..++. .|+..+++.+++++...+...+...+. ..+...++.++|+|||++|+|||||+...+++
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRT-GSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEE-ETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 9999999999999999997 899999999999988776666554332 23445688999999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+.+.+.+|+.||+|++|+||||+.+|+.|++.+++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999955789999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
++||+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.+++++
T Consensus 247 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 326 (495)
T 3b4w_A 247 MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQ 326 (495)
T ss_dssp TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCC
T ss_pred cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCc
Confidence 999999999999999999999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 626 (732)
+||++++++++++.++|++++++|+++++||..... ...|+|++||||.+++++|++++||+||||++|++|+|++||
T Consensus 327 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 404 (495)
T 3b4w_A 327 IGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDA 404 (495)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHH
Confidence 999999999999999999999999999999974210 125899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 627 i~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|+++|+++|||+++|||+|.+.++++++++++|+|+||++. ..+..||||+|.||+| +++|++|+++|++.|+|..
T Consensus 405 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~--~~~~~PfGG~k~SG~G--r~~G~~gl~~~~~~k~v~~ 480 (495)
T 3b4w_A 405 IAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA--FDPGSPFGGYKNSGIG--RENGPEGVEHFTQQKSVLL 480 (495)
T ss_dssp HHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC--CCTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEC
T ss_pred HHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC--CCCCCCCCCCCCCCcC--ccchHHHHHHhcceeEEEE
Confidence 99999999999999999999999999999999999999875 3466778889999999 6999999999999999986
Q ss_pred ec
Q 004768 707 QW 708 (732)
Q Consensus 707 ~~ 708 (732)
++
T Consensus 481 ~~ 482 (495)
T 3b4w_A 481 PM 482 (495)
T ss_dssp CT
T ss_pred cc
Confidence 54
No 22
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=7e-94 Score=805.18 Aligned_cols=476 Identities=28% Similarity=0.452 Sum_probs=445.9
Q ss_pred CCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 229 ~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
+..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||..|+.++.++|.++|+++++.|+++.
T Consensus 4 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2ve5_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34578999999999877789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 309 DKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
++|+++++.|+|||..+++. |+..+++.+++++...+...+...+. ..+...++.++|+|||++|+|||||+.+.+++
T Consensus 84 ~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 162 (490)
T 2ve5_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeeEeeccccEEEEECCCcchHHHHHHH
Confidence 99999999999999999986 99999999999998877655543332 34566788999999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHh-
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRA- 465 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a- 465 (732)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|. .+.+++|+.||+|++|+||||+.+|+.|++.+
T Consensus 163 ~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~ 242 (490)
T 2ve5_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS 242 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhch
Confidence 9999999999999999999999999999999999999999999995 47999999999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCC
Q 004768 466 SAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESN 544 (732)
Q Consensus 466 a~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~ 544 (732)
+++++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+++
T Consensus 243 a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~ 322 (490)
T 2ve5_A 243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN 322 (490)
T ss_dssp HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred hccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 88999999999999999999999999999999999999999999999999999998 79999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHH
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 624 (732)
+++||++++++++++.++|++++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|++
T Consensus 323 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~d 402 (490)
T 2ve5_A 323 TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDED 402 (490)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHH
Confidence 99999999999999999999999999999999975322223468999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 625 eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|.||+| +++|++|+++|++.|+|
T Consensus 403 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~pfGG~k~SG~G--~~~G~~~~~~f~~~k~v 479 (490)
T 2ve5_A 403 EAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGES-PAEMPVGGYKQSGVG--RENGLTTLAHYTRIKSV 479 (490)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCCCCCCCC--CcchHHHHHHhheeEEE
Confidence 999999999999999999999999999999999999999997533 466778889999999 69999999999999999
Q ss_pred EEec
Q 004768 705 TQQW 708 (732)
Q Consensus 705 ~~~~ 708 (732)
..++
T Consensus 480 ~~~~ 483 (490)
T 2ve5_A 480 QVEL 483 (490)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 8765
No 23
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=5e-94 Score=803.16 Aligned_cols=468 Identities=26% Similarity=0.406 Sum_probs=437.4
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
.++++||||+|+.+.+ .+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++.+
T Consensus 22 ~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (495)
T 1wnd_A 22 MQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQ 100 (495)
T ss_dssp CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3467899999998766 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|++++++|+|||..++.. |+..+++.++++++..+...++..+....+...++.++|+|||++|+|||||+...++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (495)
T 1wnd_A 101 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHH
Confidence 9999999999999999988 999999999999987766554433222134456888999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|. .+.+.+|+.||+|++|+||||+.+|+.|++.+++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 259 (495)
T 1wnd_A 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 259 (495)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 999999999995 4789999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
+++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+++++
T Consensus 260 ~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 339 (495)
T 1wnd_A 260 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTE 339 (495)
T ss_dssp GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCC
T ss_pred cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCC
Confidence 999999999999999999999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcC-CEEEecCc-ccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESG-AKLLLDGR-NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~G-a~~~~gg~-~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 624 (732)
+|||+++++++++.++|++++++| +++++||. .. +.|+|++||||.+++++|++++||+||||++|++|+|++
T Consensus 340 ~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 414 (495)
T 1wnd_A 340 LGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEE 414 (495)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHH
Confidence 999999999999999999999999 99999986 31 258999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 625 eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|.||+| +++|++|+++|++.|+|
T Consensus 415 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~f~~~k~v 491 (495)
T 1wnd_A 415 QVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML-VSEMPHGGQKLSGYG--KDMSLYGLEDYTVVRHV 491 (495)
T ss_dssp HHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC-CTTSCBCCSGGGEEC--CBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCCcCcCC--ccchHHHHHHhhCeEEE
Confidence 999999999999999999999999999999999999999986432 356677788999999 69999999999999998
Q ss_pred EEe
Q 004768 705 TQQ 707 (732)
Q Consensus 705 ~~~ 707 (732)
..+
T Consensus 492 ~~~ 494 (495)
T 1wnd_A 492 MVK 494 (495)
T ss_dssp EEE
T ss_pred Eec
Confidence 753
No 24
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=8e-94 Score=808.39 Aligned_cols=469 Identities=26% Similarity=0.415 Sum_probs=440.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
.+++||||+|+. ++.+++++||+| |+++++++.++.+|+++|+++|++||..|+.++..+|.++|++++++|+++.+
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKH 114 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 467899999998 457899999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHH-HHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGV-ATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|+++++.|+|||..+++.|+..+++.+++++.. .+...+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 115 ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 193 (538)
T 3qan_A 115 EFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILS-RPGEQNRYFYTPMGVTVTISPWNFALAIMVGTA 193 (538)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCC-CTTEEEEEEEEECCEEEEECCSTTTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc-cCCcceeeecCCCcEEEEECCCchHHHHHHHHH
Confidence 9999999999999999999999999999999987 56555554332 235678899999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++.
T Consensus 194 a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 273 (538)
T 3qan_A 194 VAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAV 273 (538)
T ss_dssp HHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTS
T ss_pred HHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999965 789999999999999999999999999999998
Q ss_pred C------CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCC
Q 004768 468 K------GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAG 540 (732)
Q Consensus 468 ~------~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~ 540 (732)
+ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|
T Consensus 274 ~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 353 (538)
T 3qan_A 274 VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDP 353 (538)
T ss_dssp CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCT
T ss_pred ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCC
Confidence 8 99999999999999999999999999999999999999999999999999999 7999999999999999999
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEec
Q 004768 541 TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQA 620 (732)
Q Consensus 541 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~ 620 (732)
.++++++||++++++++++.++|++++++| ++++||... . ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 354 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~---~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 428 (538)
T 3qan_A 354 TNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGD---S-STGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKA 428 (538)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEE---C-SSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcC---C-CCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEe
Confidence 999999999999999999999999999999 999999752 1 26999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEEC-CCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhh
Q 004768 621 ESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN-VPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYT 699 (732)
Q Consensus 621 ~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN-~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~ 699 (732)
+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+|| .+.....+..||||+|+||+|. +++|++|+++|+
T Consensus 429 ~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~G~~gl~~ft 507 (538)
T 3qan_A 429 NDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDS-KAGGPDYLALHM 507 (538)
T ss_dssp SSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCC-CBTSTTTGGGGE
T ss_pred CCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCc-ccccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999 4544335677888999999993 489999999999
Q ss_pred eeeEEEEec
Q 004768 700 QIKTVTQQW 708 (732)
Q Consensus 700 ~~k~v~~~~ 708 (732)
+.|+|..++
T Consensus 508 ~~k~v~~~~ 516 (538)
T 3qan_A 508 QAKTVSEMY 516 (538)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEec
Confidence 999998764
No 25
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=5e-94 Score=804.11 Aligned_cols=469 Identities=29% Similarity=0.419 Sum_probs=438.6
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---hhcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS---SWRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 3579999999886677899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 309 DKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
++|++++++|+|||..++. .|+..+++.++++++..+...+..... ..+...++.++|+|||++|+|||||+...+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 178 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWK 178 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHHH
Confidence 9999999999999999874 599999999999998776655543332 23455688999999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ +.+.+|+.||+|++|+||||+.+|+.|++.++
T Consensus 179 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 258 (500)
T 1o04_A 179 LGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258 (500)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999954 78999999999999999999999999999999
Q ss_pred -cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCC
Q 004768 467 -AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESN 544 (732)
Q Consensus 467 -~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~ 544 (732)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.+++
T Consensus 259 ~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 338 (500)
T 1o04_A 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSK 338 (500)
T ss_dssp HTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCccccc
Confidence 9999999999999999999999999999999999999999999999999999998 79999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHH
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 624 (732)
+++||++++++++++.++|++++++|+++++||... ...|+|++||||.+++++|++++||+||||++|++|+|++
T Consensus 339 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 414 (500)
T 1o04_A 339 TEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414 (500)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred CccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHH
Confidence 999999999999999999999999999999999742 1358999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 625 eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|.||+| +++|.+|+++|++.|+|
T Consensus 415 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~f~~~K~v 491 (500)
T 1o04_A 415 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF-GAQSPFGGYKMSGSG--RELGEYGLQAYTEVKTV 491 (500)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC-CTTSCBCCSGGGEES--CBSTGGGGGGGEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCCCCcCCCCCC--ccchHHHHHHhcceEEE
Confidence 999999999999999999999999999999999999999986532 355677788999999 68999999999999999
Q ss_pred EEec
Q 004768 705 TQQW 708 (732)
Q Consensus 705 ~~~~ 708 (732)
..++
T Consensus 492 ~~~~ 495 (500)
T 1o04_A 492 TVKV 495 (500)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8664
No 26
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1e-93 Score=798.86 Aligned_cols=457 Identities=25% Similarity=0.408 Sum_probs=425.9
Q ss_pred cccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 004768 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAM 313 (732)
Q Consensus 234 ~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 313 (732)
+||||+|+.+ +. ++++||+||+++++++.++.+|+++|+++|++||..|+.++.++|.++|++++++|+++.++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999986 34 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhh
Q 004768 314 EITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVT 393 (732)
Q Consensus 314 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 393 (732)
++++|+|||..+++.|+..+++.+++++...+...+...+. .+...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 79 ~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 156 (486)
T 3pqa_A 79 ILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIA 156 (486)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877665554332 2567788999999999999999999999999999999
Q ss_pred cCCeEEecCCCCChHHHHHHHHHHHHc----CCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC
Q 004768 394 CGNTFILKPSEKVPGAAVILAELAVEA----GLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468 (732)
Q Consensus 394 aGN~VVlkps~~~~~~~~~l~~~l~~a----glP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 468 (732)
+||+||+|||+.+|+++..|++++.++ |+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++
T Consensus 157 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa-- 234 (486)
T 3pqa_A 157 TGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG-- 234 (486)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--
Confidence 999999999999999999999999999 99999999999976 57899999999999999999999999998877
Q ss_pred CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCc
Q 004768 469 GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADL 547 (732)
Q Consensus 469 ~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~ 547 (732)
++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++
T Consensus 235 ~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 314 (486)
T 3pqa_A 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDV 314 (486)
T ss_dssp SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSB
T ss_pred CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 89999999999999999999999999999999999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHH
Q 004768 548 GPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627 (732)
Q Consensus 548 gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 627 (732)
||++++++++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| +|||
T Consensus 315 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi 385 (486)
T 3pqa_A 315 GPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR-------DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMI 385 (486)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC-------CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHH
Confidence 99999999999999999999999999999863 5899999999 9999999999999999999999999 9999
Q ss_pred HHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 628 EIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 628 ~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
+++|+++|||+++|||+|.+.++++++++++|+|+||+++....+..||||+|+||+| +++|++|+++|++.|+|..+
T Consensus 386 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G--r~~g~~gl~~f~~~k~v~~~ 463 (486)
T 3pqa_A 386 DIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLG--REGVKYAMEEMSNIKTIIIS 463 (486)
T ss_dssp HHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEES--CBSHHHHHHHTEEEEEEEEE
T ss_pred HHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCC--CCCcHHHHHHhhceEEEEEc
Confidence 9999999999999999999999999999999999999976444457788899999999 69999999999999999876
Q ss_pred c
Q 004768 708 W 708 (732)
Q Consensus 708 ~ 708 (732)
+
T Consensus 464 ~ 464 (486)
T 3pqa_A 464 K 464 (486)
T ss_dssp C
T ss_pred C
Confidence 4
No 27
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1e-93 Score=804.97 Aligned_cols=468 Identities=26% Similarity=0.403 Sum_probs=426.6
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++.++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (508)
T 3r64_A 12 ATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREE 91 (508)
T ss_dssp TTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45789999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceeccc-CCCceeEEEeecceeEEEecCCchhhhhHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNI-SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 389 (732)
|+++++.|+|||..+++.|+..+++.+++++...+...+ ..+.. ..+...++.++|+|||++|+|||||+...+++++
T Consensus 92 la~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 170 (508)
T 3r64_A 92 IVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVA 170 (508)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHH
Confidence 999999999999999999999999999999876655444 33221 2356788999999999999999999999999999
Q ss_pred HHhhcCCeEEecCCCCChHHH-HHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 390 IAVTCGNTFILKPSEKVPGAA-VILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 390 ~ALaaGN~VVlkps~~~~~~~-~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
+||++||+||+|||+.+|+++ .+|+++|.++|+|+|++|+|+|+ .+.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 171 ~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~ 250 (508)
T 3r64_A 171 PALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAIN 250 (508)
T ss_dssp HHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHS
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhc
Confidence 999999999999999999999 99999999999999999999997 5799999999999999999999999999999998
Q ss_pred --CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCC
Q 004768 468 --KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESN 544 (732)
Q Consensus 468 --~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~ 544 (732)
+++|+++|||||+|+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+++
T Consensus 251 ~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 330 (508)
T 3r64_A 251 GGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEG 330 (508)
T ss_dssp SSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSS
T ss_pred ccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCC
Confidence 899999999999999999999999999999999999999999999999999998 79999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHH
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 624 (732)
+++||+++++++++++++|++++++|+++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|++
T Consensus 331 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 403 (508)
T 3r64_A 331 TLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI-------EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEA 403 (508)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE-------ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHH
T ss_pred CcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC-------CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHH
Confidence 99999999999999999999999999999999863 58999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 625 eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.....+..||||+|.||+| +++|++|+++||+.|+|
T Consensus 404 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~G--r~~G~~~l~~ft~~k~v 481 (508)
T 3r64_A 404 HAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLG--RFNGDWAIEEFTTDRWI 481 (508)
T ss_dssp HHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC----------------------CCCHHHHHHHTEEEEEE
T ss_pred HHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCC--cCccHHHHHHhhceEEE
Confidence 9999999999999999999999999999999999999999976433566778889999999 68999999999999999
Q ss_pred EEec
Q 004768 705 TQQW 708 (732)
Q Consensus 705 ~~~~ 708 (732)
..++
T Consensus 482 ~~~~ 485 (508)
T 3r64_A 482 GIKR 485 (508)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8764
No 28
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=2.3e-93 Score=800.49 Aligned_cols=472 Identities=20% Similarity=0.328 Sum_probs=437.7
Q ss_pred CCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 228 NPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 228 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
.+.+++.||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||..|+.++.++|.++|+++++.|+++
T Consensus 20 ~~~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 97 (500)
T 2j6l_A 20 LREENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREK 97 (500)
T ss_dssp CCSEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999994 346899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
.++|+++++.|+|||..++..|+..+++.+++++...+...+...+....+...++.++|+|||++|+|||||+.+.+++
T Consensus 98 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (500)
T 2j6l_A 98 IQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWN 177 (500)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHH
Confidence 99999999999999999999999999999999988776555554332223445677899999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHH----HcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHH
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAV----EAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYS 463 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~----~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 463 (732)
+++||++||+||+|||+.+|+++..|++++. ++|+|+|++|+|+|+.+++++|+.||+|++|+||||+.+|+.|++
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~ 257 (500)
T 2j6l_A 178 NAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257 (500)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999998888765 569999999999996678999999999999999999999999999
Q ss_pred HhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCC
Q 004768 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTE 542 (732)
Q Consensus 464 ~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~ 542 (732)
.++++++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+
T Consensus 258 ~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 337 (500)
T 2j6l_A 258 MVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWD 337 (500)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCccc
Confidence 9999999999999999999999999999999999999999999999999999999998 799999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCC
Q 004768 543 SNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES 622 (732)
Q Consensus 543 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~ 622 (732)
+++++|||+++++++++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 338 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (500)
T 2j6l_A 338 PNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVM----DRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQN 413 (500)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----SSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECC
T ss_pred CCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCccc----CCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCC
Confidence 99999999999999999999999999999999999752 13689999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHH--hhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhe
Q 004768 623 IDEAIEIVNRNRHGSGASIFTTSAVAARKFQ--IEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQ 700 (732)
Q Consensus 623 ~~eai~~~n~~~~glsasv~t~d~~~~~~~~--~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~ 700 (732)
++|||+++|+++|||+++|||+|.+.+++++ .++++|+|+||++.....+..||||+|.||+| +++|.+|+++|++
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~f~~ 491 (500)
T 2j6l_A 414 EEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGG--RESGSDAWKQYMR 491 (500)
T ss_dssp HHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSC--CEESTTGGGGGEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCC--CcchHHHHHHhhc
Confidence 9999999999999999999999999999999 77999999999875433455678889999999 6999999999999
Q ss_pred eeEEEEe
Q 004768 701 IKTVTQQ 707 (732)
Q Consensus 701 ~k~v~~~ 707 (732)
.|+|+.+
T Consensus 492 ~k~v~~~ 498 (500)
T 2j6l_A 492 RSTCTIN 498 (500)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999764
No 29
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.5e-93 Score=801.46 Aligned_cols=469 Identities=23% Similarity=0.362 Sum_probs=423.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (485)
T 4dng_A 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDD 85 (485)
T ss_dssp CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceeccc-CCCceeEEEeecceeEEEecCCchhhhhHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNI-SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 389 (732)
|++++++|+|||..+++.|+..+++.+++++...+...+...+.. ..+...++.++|+|||++|+|||||+...+++++
T Consensus 86 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 165 (485)
T 4dng_A 86 IIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIA 165 (485)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHH
Confidence 999999999999999999999999999999988776655543322 3456788999999999999999999999999999
Q ss_pred HHhhcCCeEEecCCCCChHHH-HHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 390 IAVTCGNTFILKPSEKVPGAA-VILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 390 ~ALaaGN~VVlkps~~~~~~~-~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
+||++||+||+|||+.+|+++ .+|.++|.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 166 ~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~ 245 (485)
T 4dng_A 166 PAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGR 245 (485)
T ss_dssp HHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhh
Confidence 999999999999999999999 999999999999999999999987 588999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
+++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+++++
T Consensus 246 ~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~ 325 (485)
T 4dng_A 246 AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTV 325 (485)
T ss_dssp HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCS
T ss_pred hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCc
Confidence 999999999999999999999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 626 (732)
+||++++++++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++||
T Consensus 326 ~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA 398 (485)
T 4dng_A 326 VGPLINERQIEKALEIIEQAKTDGIELAVEGKR-------VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEA 398 (485)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHH
Confidence 999999999999999999999999999999864 5899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 627 i~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|+++|+++|||+++|||+|.+.++++++++++|+|+||++.....+..||||+|.||+| +++|++|+++||+.|+|+.
T Consensus 399 i~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~t~~k~v~~ 476 (485)
T 4dng_A 399 IDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVG--RFGNPWVVEEFTVTKWISI 476 (485)
T ss_dssp HHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC------------------------CHHHHHHHEEEEEEEE
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCC--ccchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999976444566778889999999 6899999999999999987
Q ss_pred ec
Q 004768 707 QW 708 (732)
Q Consensus 707 ~~ 708 (732)
++
T Consensus 477 ~~ 478 (485)
T 4dng_A 477 QK 478 (485)
T ss_dssp EC
T ss_pred ec
Confidence 65
No 30
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=2.2e-93 Score=800.01 Aligned_cols=467 Identities=23% Similarity=0.348 Sum_probs=437.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH-hhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS-SWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
.+++||||+|+.+. .+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|+++.+
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 95 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLD 95 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45789999999875 6899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceeccc--CC--CceeEEEeecceeEEEecCCchhhhhHH
Q 004768 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNI--SN--GVDTYSIREPLGVCAGICSFDFPAMTPL 385 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 385 (732)
+|++++++|+|||..++..|+..+++.+++++...+...+...... .. +...++.++|+|||++|+|||||+.+.+
T Consensus 96 ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 175 (501)
T 1uxt_A 96 VFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAV 175 (501)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHH
Confidence 9999999999999999999999999999999887766655543321 22 3367889999999999999999999999
Q ss_pred HHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHh
Q 004768 386 WMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRA 465 (732)
Q Consensus 386 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 465 (732)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+++.+++|+.||+|++|+||||+.+|+.|++.+
T Consensus 176 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~a 255 (501)
T 1uxt_A 176 NKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG 255 (501)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999778889999999999999999999999999988
Q ss_pred hcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCC
Q 004768 466 SAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESN 544 (732)
Q Consensus 466 a~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~ 544 (732)
+ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+++
T Consensus 256 a--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 333 (501)
T 1uxt_A 256 G--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPT 333 (501)
T ss_dssp C--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred C--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccC
Confidence 7 99999999999999999999999999999999999999999999999999998 79999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCC-ceEeeEEEecCC---CCCcccccccccceeEeEec
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENG-NFIGPTILSDVT---VNMECYKEDVFGPVLLCMQA 620 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g-~~~~Ptil~~~~---~~~~~~~~E~fgPvl~v~~~ 620 (732)
+++||++++++++++.++|++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|
T Consensus 334 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 334 VDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred CcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 99999999999999999999999999999999863 47 899999999999 99999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhe
Q 004768 621 ESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQ 700 (732)
Q Consensus 621 ~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~ 700 (732)
+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+++....+..||||+|+||+| +++|++|+++|++
T Consensus 407 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G--~~~G~~~l~~f~~ 484 (501)
T 1uxt_A 407 KDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVF--REGIGYAVEAVTA 484 (501)
T ss_dssp SSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEES--CBSTTTTHHHHEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCC--ccChHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999873223466778888999999 6999999999999
Q ss_pred eeEEEEeccC
Q 004768 701 IKTVTQQWKD 710 (732)
Q Consensus 701 ~k~v~~~~~~ 710 (732)
.|+|..++..
T Consensus 485 ~k~v~~~~~~ 494 (501)
T 1uxt_A 485 YKTIVFNYKG 494 (501)
T ss_dssp EEEEEEECTT
T ss_pred eeEEEEecCC
Confidence 9999877543
No 31
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=2.4e-93 Score=797.88 Aligned_cols=466 Identities=27% Similarity=0.453 Sum_probs=437.7
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
.++||||+|+.+. .+++++||+||+++++++.++.+|++.|+++|++||+.|+.++.++|.++|+++++.|+++.++|
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999875 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHH
Q 004768 312 AMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA 391 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 391 (732)
++++++|+|||..++..|+..+++.+++++...+...+........+...++.++|+|||++|+|||||+...++++++|
T Consensus 91 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (487)
T 2w8n_A 91 ARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAA 170 (487)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999988776655543322235567889999999999999999999999999999
Q ss_pred hhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEe---CCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 392 VTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVH---GTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 392 LaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~---g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
|++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+ |.+ +.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 171 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~ 250 (487)
T 2w8n_A 171 LAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAAN 250 (487)
T ss_dssp HHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHT
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999 844 688999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhc-ccccCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKA-IKVNAGTESNA 545 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~-l~~g~~~~~~~ 545 (732)
+++|+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.+++++ +++|+|.++++
T Consensus 251 ~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~ 330 (487)
T 2w8n_A 251 SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGT 330 (487)
T ss_dssp TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTC
T ss_pred cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccC
Confidence 999999999999999999999999999999999999999999999999999998 7999999999999 99999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCc-eEeeEEEecCCCCCcccccccccceeEeEecCCHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN-FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~-~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 624 (732)
++||++++++++++.++|++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+|++
T Consensus 331 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-----~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ 405 (487)
T 2w8n_A 331 TQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-----QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405 (487)
T ss_dssp CBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-----TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-----CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence 99999999999999999999999999999999742 2588 99999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 625 eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|.||+| +++|++|+++|++.|+|
T Consensus 406 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~~~SG~G--~~~G~~~l~~f~~~k~v 482 (487)
T 2w8n_A 406 EAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS-SVECPFGGVKQSGLG--REGSKYGIDEYLELKYV 482 (487)
T ss_dssp HHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCC-CTTSCBCCSGGGEES--CBSTTTGGGGGEEEEEE
T ss_pred HHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC-CCCCCCCCCCCCCcC--CCchHHHHHHhcCccEE
Confidence 999999999999999999999999999999999999999987543 345677888999999 68999999999999998
Q ss_pred EEe
Q 004768 705 TQQ 707 (732)
Q Consensus 705 ~~~ 707 (732)
..+
T Consensus 483 ~~~ 485 (487)
T 2w8n_A 483 CYG 485 (487)
T ss_dssp EEC
T ss_pred EEe
Confidence 753
No 32
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=8.8e-93 Score=792.49 Aligned_cols=463 Identities=29% Similarity=0.407 Sum_probs=434.1
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++.++
T Consensus 4 ~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 81 (475)
T 1euh_A 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 81 (475)
T ss_dssp BCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 467899999998754 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCC----cee-EEEeecceeEEEecCCchhhhhHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNG----VDT-YSIREPLGVCAGICSFDFPAMTPL 385 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~ 385 (732)
|+++++.|+|||..+++.|+..+++.+++++...+...+........+ ... ++.++|+|||++|+|||||+.+.+
T Consensus 82 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (475)
T 1euh_A 82 IGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAG 161 (475)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHH
Confidence 999999999999999999999999999999987766555433322123 356 889999999999999999999999
Q ss_pred HHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHH
Q 004768 386 WMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSR 464 (732)
Q Consensus 386 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 464 (732)
+++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.
T Consensus 162 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 241 (475)
T 1euh_A 162 SKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 241 (475)
T ss_dssp HHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999975 688999999999999999999999999998
Q ss_pred hhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 465 ASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 465 aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
++ ++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+
T Consensus 242 aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~- 318 (475)
T 1euh_A 242 AG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED- 318 (475)
T ss_dssp TT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-
T ss_pred cC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-
Confidence 87 89999999999999999999999999999999999999999999999999998 799999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCH
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESI 623 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~ 623 (732)
++++||++++++++++.++|++++++|+++++||.. .|+|++||||.+++++|++++||+||||++|++|+|+
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 391 (475)
T 1euh_A 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391 (475)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCH
Confidence 999999999999999999999999999999999863 4899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECC-CCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheee
Q 004768 624 DEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINV-PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIK 702 (732)
Q Consensus 624 ~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~-~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k 702 (732)
+|||+++|+++|||+++|||+|.+.++++++++++|+|+||+ +... .+..||||+|+||+| +++|++|+++|++.|
T Consensus 392 ~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~-~~~~pfGG~k~SG~G--~~~g~~~~~~~~~~k 468 (475)
T 1euh_A 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG-TDNFPFLGAKKSGAG--IQGVKYSIEAMTTVK 468 (475)
T ss_dssp HHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC-STTSCBCCEETTEES--CBSHHHHHHHTEEEE
T ss_pred HHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC-CCCCCcCCCCCCCcC--CCccHHHHHHhCCee
Confidence 999999999999999999999999999999999999999999 6533 466778888999999 699999999999999
Q ss_pred EEEEec
Q 004768 703 TVTQQW 708 (732)
Q Consensus 703 ~v~~~~ 708 (732)
+|..++
T Consensus 469 ~v~~~~ 474 (475)
T 1euh_A 469 SVVFDI 474 (475)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998653
No 33
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.4e-92 Score=789.44 Aligned_cols=452 Identities=22% Similarity=0.317 Sum_probs=427.9
Q ss_pred eEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH
Q 004768 248 SIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY 327 (732)
Q Consensus 248 ~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 327 (732)
+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++|+++++.|+|||..+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCCh
Q 004768 328 NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVP 407 (732)
Q Consensus 328 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~ 407 (732)
.|+..+++.+++++...+...+..... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKLN-SDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEEC-CTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeecc-CCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 999999999999998877666554332 2455788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCeEEEEeCChh-HHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEcc
Q 004768 408 GAAVILAELAVEAGLPNGVLNIVHGTDD-IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486 (732)
Q Consensus 408 ~~~~~l~~~l~~aglP~g~v~vv~g~~~-~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~ 486 (732)
+++..|++++.++|+|+|++|+|+|+++ .++ |+.||+|++|+||||+.+|+.|++.+++++||+++|||||+|+||++
T Consensus 164 ~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~ 242 (484)
T 3ros_A 164 GSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLD 242 (484)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCC
Confidence 9999999999999999999999999874 566 99999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 004768 487 DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQV 565 (732)
Q Consensus 487 daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~ 565 (732)
|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++++++||++++++++++.++|++
T Consensus 243 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 322 (484)
T 3ros_A 243 DADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKE 322 (484)
T ss_dssp TCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 79999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCC
Q 004768 566 DTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645 (732)
Q Consensus 566 a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d 645 (732)
++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 323 a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d 398 (484)
T 3ros_A 323 AIDAGAKVFYQYPEI----DSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSD 398 (484)
T ss_dssp HHHTTCEEEEECCCC----CCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSC
T ss_pred HHHcCCeEEecCCcC----CCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCC
Confidence 999999999999752 2479999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 646 AVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 646 ~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
.+.++++++++++|+|+||++.. ..+..||||.|+||+| +++|++|+++|++.|+|..+.
T Consensus 399 ~~~a~~~~~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 399 IDRAKKVSAQIETGMTVINGRWI-TSGELPFGGIKKSGYG--RELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHHHHHHHHSCSSCCEETSCCC-CCTTSCBCCSGGGEES--CBSHHHHHTTTCEEEEEEECG
T ss_pred HHHHHHHHHhCccceEEECCCCC-CCCCCCcCCcCcccCC--cCchHHHHHHhheeEEEEECC
Confidence 99999999999999999999643 3467788899999999 699999999999999998764
No 34
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=7.1e-92 Score=791.42 Aligned_cols=468 Identities=26% Similarity=0.419 Sum_probs=433.8
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~-~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
.+++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.+
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKR 114 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999975 3689999999 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceec-ccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS-NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|++++++|+|||..+++.|+..+++.+++++...+...+.... ....+...++.++|+|||++|+|||||+.+.++++
T Consensus 115 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 194 (516)
T 1uzb_A 115 ELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMI 194 (516)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999877766554321 12234567889999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh-
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRAS- 466 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa- 466 (732)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|. .+.+.+|+.||+|++|+||||+.+|+.|++.++
T Consensus 195 a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 274 (516)
T 1uzb_A 195 VGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR 274 (516)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTS
T ss_pred HHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999995 478999999999999999999999999999988
Q ss_pred -----cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCC
Q 004768 467 -----AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAG 540 (732)
Q Consensus 467 -----~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~ 540 (732)
++++|+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|
T Consensus 275 ~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 354 (516)
T 1uzb_A 275 LAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA 354 (516)
T ss_dssp CCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG
T ss_pred ccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC
Confidence 7899999999999999999999999999999999999999999999999999998 7999999999999999999
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEec
Q 004768 541 TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQA 620 (732)
Q Consensus 541 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~ 620 (732)
++++++|||+++.+++++.++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||++|++|
T Consensus 355 -~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 428 (516)
T 1uzb_A 355 -EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV 428 (516)
T ss_dssp -GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred -ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccC----CCCCcEECCEEEECCCCCCHhhhccccCceEEEEEe
Confidence 99999999999999999999999999889 899998641 136899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhh
Q 004768 621 ESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYT 699 (732)
Q Consensus 621 ~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~ 699 (732)
+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... ..+..||||+|.||+|+ +++|.+|+++|+
T Consensus 429 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~l~~f~ 507 (516)
T 1uzb_A 429 KDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA-KTGALDYLRLFL 507 (516)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCC-CBTSHHHHHTTE
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCC-ccchHHHHHHcC
Confidence 9999999999999999999999999999999999999999999986432 34566788899999994 368999999999
Q ss_pred eeeEEEEe
Q 004768 700 QIKTVTQQ 707 (732)
Q Consensus 700 ~~k~v~~~ 707 (732)
+.|+|..+
T Consensus 508 ~~k~v~~~ 515 (516)
T 1uzb_A 508 EMKAVAER 515 (516)
T ss_dssp EEEEEEEE
T ss_pred CeeEEEec
Confidence 99998753
No 35
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1e-92 Score=793.36 Aligned_cols=466 Identities=28% Similarity=0.414 Sum_probs=417.9
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++.++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 86 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDD 86 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46799999999987778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHH-HHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHH
Q 004768 311 LAMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 389 (732)
|+++++.|+|||..++ ..|+..+++.+++++.......+... +...++.++|+|||++|+|||||+...+++++
T Consensus 87 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 161 (478)
T 3ty7_A 87 IVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLA 161 (478)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHHH
Confidence 9999999999999999 77999999999999987766554431 23467889999999999999999999999999
Q ss_pred HHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC
Q 004768 390 IAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468 (732)
Q Consensus 390 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 468 (732)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++++
T Consensus 162 ~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~ 241 (478)
T 3ty7_A 162 AAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKD 241 (478)
T ss_dssp HHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTT
T ss_pred HHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999965 7899999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCc
Q 004768 469 GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADL 547 (732)
Q Consensus 469 ~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~ 547 (732)
++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++
T Consensus 242 ~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 321 (478)
T 3ty7_A 242 FKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQV 321 (478)
T ss_dssp TCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHH
Q 004768 548 GPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627 (732)
Q Consensus 548 gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 627 (732)
||+++++++++++++|++++++|+++++||.... .+...|+|++|||+.+++++|++++||+||||++|++|+|++|||
T Consensus 322 gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi 400 (478)
T 3ty7_A 322 GPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAI 400 (478)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHH
Confidence 9999999999999999999999999999994321 122479999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 628 EIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 628 ~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
+++|+++|||+++|||+|.+.++++++++++|+|+||+. ...+..||||+|+||+| +++|++|+++||+.|+|..
T Consensus 401 ~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~--~~~~~~PfGG~k~SG~G--~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 401 QIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA--GRKPDLPFGGYKQSGLG--REWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETTC--C------------------------CCGGGEEEEEEET
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCC--CCCCCCCcCCcCcCcCC--ccchHHHHHHhcCeEEEEE
Confidence 999999999999999999999999999999999999993 23355677888999999 6999999999999999873
No 36
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.3e-90 Score=773.71 Aligned_cols=453 Identities=26% Similarity=0.410 Sum_probs=428.9
Q ss_pred CeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHH
Q 004768 247 TSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDA 326 (732)
Q Consensus 247 ~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 326 (732)
.+++++||+||+++++++.++.+|+++|+++|++||..|+.++..+|.++|+++++.|+++.++|+++++.|+|||..++
T Consensus 7 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 86 (462)
T 3etf_A 7 TQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQA 86 (462)
T ss_dssp CCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred CccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCC
Q 004768 327 YNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKV 406 (732)
Q Consensus 327 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~ 406 (732)
+.|+..+++.+++++.......+.. .....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 87 ~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~t 165 (462)
T 3etf_A 87 RAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNV 165 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCC
Confidence 9999999999999998777655544 222235567889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEcc
Q 004768 407 PGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486 (732)
Q Consensus 407 ~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~ 486 (732)
|+++.+|+++|.++|+|+|++|+|+|+.+.+.+|+.||+|++|+||||+.+|+.|++.++++++|+++|+|||+|+||++
T Consensus 166 p~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~ 245 (462)
T 3etf_A 166 TGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLN 245 (462)
T ss_dssp HHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECT
T ss_pred cHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECC
Confidence 99999999999999999999999999888899999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 004768 487 DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQV 565 (732)
Q Consensus 487 daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~ 565 (732)
|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++++++++.++|++
T Consensus 246 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~ 325 (462)
T 3etf_A 246 DADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQA 325 (462)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 79999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCC
Q 004768 566 DTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645 (732)
Q Consensus 566 a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d 645 (732)
++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 326 a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d 401 (462)
T 3etf_A 326 SVAEGARLLLGGEKI----AGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTAD 401 (462)
T ss_dssp HHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSC
T ss_pred HHHCCCEEEeCCccc----CCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCC
Confidence 999999999999752 2468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 646 AVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 646 ~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++||+.|+|..+
T Consensus 402 ~~~a~~~~~~l~aG~v~vN~~~~-~~~~~PfGG~k~SG~G--~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 402 DTLAAEMAARLECGGVFINGYSA-SDARVAFGGVKKSGFG--RELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp HHHHHHHHHHCCSSEEEESSCCC-CCTTSCBCCSGGGEEC--CBSHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcCCCCCC--ccchHHHHHHHhceeEEEEe
Confidence 99999999999999999999753 3466788899999999 69999999999999998754
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=7.5e-91 Score=785.22 Aligned_cols=472 Identities=19% Similarity=0.271 Sum_probs=433.5
Q ss_pred CCCCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 229 PPRVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 229 ~~~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
+.++++||||+|+.+.+ .+.++||.| ++++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++
T Consensus 61 ~~~~~~~I~G~~~~~~~--~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~ 138 (563)
T 4e3x_A 61 TEAIPCVVGDEEVWTSD--IQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGP 138 (563)
T ss_dssp CEECCEEETTEEECCSC--EEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred CccCCeEECCEEeecCC--ceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Confidence 34688999999998753 578899998 799999999999999999999999999999999999999999999999998
Q ss_pred -HHHHHHHHHHHhCCCHHHHHHH-HHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHH
Q 004768 308 -MDKLAMEITSEHGKTLTDAYND-VLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPL 385 (732)
Q Consensus 308 -~~~la~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 385 (732)
+++|+.++++|+|||..+++.| +..+++++++++.......+........+...+.++.|+|||++|+|||||+....
T Consensus 139 ~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~ 218 (563)
T 4e3x_A 139 RRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGN 218 (563)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHH
T ss_pred cHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHH
Confidence 9999999999999999999887 99999999999988776655432222223345566778899999999999999999
Q ss_pred HHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHH
Q 004768 386 WMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSR 464 (732)
Q Consensus 386 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 464 (732)
+++++|| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++ +++++|+.||+|++|+||||+.+|+.|++.
T Consensus 219 ~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~ 297 (563)
T 4e3x_A 219 LAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQ 297 (563)
T ss_dssp HHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999 59999999999999999999999999999999999999976 688999999999999999999999999999
Q ss_pred hhcCCCc------EEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccc
Q 004768 465 ASAKGKR------IQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKV 537 (732)
Q Consensus 465 aa~~~~~------v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~ 537 (732)
++.+++| +++|||||||+||++|||++.|++.+++++|.|+||.|++++||||++++ ++|+++|+++++++++
T Consensus 298 aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~v 377 (563)
T 4e3x_A 298 VAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKV 377 (563)
T ss_dssp HHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccC
Confidence 9999884 99999999999999999999999999999999999999999999999998 7999999999999999
Q ss_pred cCC-CCCCCCcCCCCCHHHHHHHHHHHHHHHH-cCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCccccccccccee
Q 004768 538 NAG-TESNADLGPVISKQEKERMCRLIQVDTE-SGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL 615 (732)
Q Consensus 538 g~~-~~~~~~~gpli~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl 615 (732)
|+| .|+++++||++++++++++.++|+++++ .|+++++||... ...|+|++|||+.+++++|++++||+||||+
T Consensus 378 Gdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl 453 (563)
T 4e3x_A 378 GDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCN----ESVGYYVEPCIIESKDPQEPIMKEEIFGPVL 453 (563)
T ss_dssp SCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEE----CSSSCEECCEEEEESCTTCGGGTSCCCSSEE
T ss_pred CCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccC----CCCCcEecCEEEecCCCCChhhcCCCcCeEE
Confidence 999 9999999999999999999999999996 799999999752 2469999999999999999999999999999
Q ss_pred EeEecCC--HHHHHHHH-HcCCCCcEEEEeCCCHHHHHHHHhhcc--eeEEEECCCCC-CCCCCCCCCCCCCCCCCCCCC
Q 004768 616 LCMQAES--IDEAIEIV-NRNRHGSGASIFTTSAVAARKFQIEIA--VGQVGINVPIS-VQPPFTLFTSSKPCFAGDLNC 689 (732)
Q Consensus 616 ~v~~~~~--~~eai~~~-n~~~~glsasv~t~d~~~~~~~~~~l~--~G~V~iN~~~~-~~~p~g~~gg~~~sg~G~~~~ 689 (732)
+|++|+| ++|||+++ |+++|||+++|||+|.+.+++++++++ +|+|+||+... ...+..||||.|.||+|. ++
T Consensus 454 ~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~-~~ 532 (563)
T 4e3x_A 454 TVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTND-KP 532 (563)
T ss_dssp EEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCC-CT
T ss_pred EEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCC-cc
Confidence 9999996 79999999 789999999999999999999999976 99999998642 223556777889999985 68
Q ss_pred ChHHHHHhhheeeEEEEec
Q 004768 690 DGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 690 ~g~~g~~~~~~~k~v~~~~ 708 (732)
+|.++++.|++.|+|.+.+
T Consensus 533 ~G~~~l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 533 GGPHYILRWTSPQVIKETH 551 (563)
T ss_dssp TSTTGGGGGBCCEEEEEEC
T ss_pred CCHHHHHHhCceEEEEEeC
Confidence 9999999999999999875
No 38
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-89 Score=769.70 Aligned_cols=461 Identities=23% Similarity=0.334 Sum_probs=429.9
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
.++||||+|+.+. +.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++.++|
T Consensus 6 ~~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 84 (490)
T 3ju8_A 6 STHYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADEL 84 (490)
T ss_dssp CCEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3789999999875 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHH
Q 004768 312 AMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA 391 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 391 (732)
+++++.|+|||..+++.|+..+++.+++++...+...+...... .+...++.++|+|||++|+|||||+.+.++++++|
T Consensus 85 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 163 (490)
T 3ju8_A 85 ARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPA 163 (490)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEE-TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999887766665543322 23455677999999999999999999999999999
Q ss_pred hhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCc
Q 004768 392 VTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKR 471 (732)
Q Consensus 392 LaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 471 (732)
|++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+.+.+++|+.||+|++|+||||+.+|+.|++.++.+++|
T Consensus 164 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~ 243 (490)
T 3ju8_A 164 LLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQK 243 (490)
T ss_dssp HHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTS
T ss_pred HHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCC
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred E-EEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc--hhhHHHHHHHHhcccccC-CCCCCCCc
Q 004768 472 I-QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI--TPWEDKLVEHAKAIKVNA-GTESNADL 547 (732)
Q Consensus 472 v-~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~--~~f~~~l~~~~~~l~~g~-~~~~~~~~ 547 (732)
+ ++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+ |.++.+++
T Consensus 244 v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~ 323 (490)
T 3ju8_A 244 ILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFM 323 (490)
T ss_dssp EEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSB
T ss_pred cEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCcc
Confidence 8 7999999999999999999999999999999999999999999999985 689999999999999999 99999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHH
Q 004768 548 GPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627 (732)
Q Consensus 548 gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 627 (732)
||++++++++++.++|++++++|+++++||... ...|+|++|||+. ++++|++++||+||||++|++|+|++|||
T Consensus 324 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi 398 (490)
T 3ju8_A 324 GAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQP----IDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAI 398 (490)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCC----STTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHCCCEEEECCCcc----CCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHH
Confidence 999999999999999999999999999999752 2478999999999 99999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 628 EIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 628 ~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
+++|+++|||+++|||+|.+.++++++++++|+|+||++.....+..||||.|.||+| |+++|++.|+|+..
T Consensus 399 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~--------~~~~~~~~k~v~~~ 470 (490)
T 3ju8_A 399 REANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH--------RPSAYYAADYCAYP 470 (490)
T ss_dssp HHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS--------CCEETTHHHHHEEE
T ss_pred HHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh--------HHHhhheeEEEEEe
Confidence 9999999999999999999999999999999999999976544566788888988865 47899999988755
No 39
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=9.2e-90 Score=767.94 Aligned_cols=457 Identities=18% Similarity=0.246 Sum_probs=424.6
Q ss_pred CCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHH
Q 004768 245 SLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLT 324 (732)
Q Consensus 245 ~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 324 (732)
.+++++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|.++|++++++|++++++|+++++.|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 3578999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhcCcee-cccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCC
Q 004768 325 DAYNDVLRGLEIVEHACGVATLQIGEFV-SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403 (732)
Q Consensus 325 ~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps 403 (732)
++..|+..+++.+++++........... ....++......++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 5567999999999998877655444322 223345556778899999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEE
Q 004768 404 EKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAV 483 (732)
Q Consensus 404 ~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~i 483 (732)
+.+|+++..|++++.++|+|+|++++++|+.+.+..|+.| +++|+||||+.+|+.|++.++++++|+++|||||||+|
T Consensus 163 ~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~i 240 (474)
T 4h7n_A 163 EIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAI 240 (474)
T ss_dssp TTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEE
T ss_pred ccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCcCccc
Confidence 9999999999999999999999999999988999999975 89999999999999999999999999999999999999
Q ss_pred EccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 004768 484 VMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRL 562 (732)
Q Consensus 484 V~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~ 562 (732)
|++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++++++||++++.+++++.++
T Consensus 241 V~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 320 (474)
T 4h7n_A 241 VLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDH 320 (474)
T ss_dssp ECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHH
T ss_pred cCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 79999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEe
Q 004768 563 IQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642 (732)
Q Consensus 563 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~ 642 (732)
+++++++|++++.||... ....|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++||
T Consensus 321 i~~a~~~ga~v~~Gg~~~---~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~ 397 (474)
T 4h7n_A 321 ILDAVEKGAVIHCGGKVE---ELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVF 397 (474)
T ss_dssp HHHHHHTTCEEEECCCCE---EETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEE
T ss_pred HHHHHhhCceeccCCccc---ccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEE
Confidence 999999999999998742 22468999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 643 TTSAVAARKFQIEIAVGQVGINVPISV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 643 t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
|+|.+.++++++++++|+|+||+.... ..+.+||||+|.||+|. +++|.+|+++|++.|+|..+.
T Consensus 398 t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~-~~~G~~g~~~f~~~k~v~~~~ 463 (474)
T 4h7n_A 398 AGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGG-SRVGAAGLKRFLRKQAFLIKT 463 (474)
T ss_dssp CSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESC-CSSTTHHHHTTEEEEEEEEEC
T ss_pred eCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCC-CcchHHHHHHhCeEEEEEECC
Confidence 999999999999999999999997533 34678888999999984 578999999999999998774
No 40
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=3.7e-88 Score=802.35 Aligned_cols=481 Identities=27% Similarity=0.363 Sum_probs=444.3
Q ss_pred CCCCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 229 PPRVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 229 ~~~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
...+++||||+|+.+ +.+++++||+| ++++++++.++.+|+++|+++|++||..|+.++..+|.++|.+++++|+++
T Consensus 529 ~~~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 529 GKTYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp CEEECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHH
Confidence 457889999999975 36899999998 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
+++|+.+++.|+|||..++..|+..+++++++++...+...+........+..+++.++|+|||++|+|||||+.+.+++
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~ 686 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGM 686 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHH
Confidence 99999999999999999999999999999999998877665544333234667888999999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
+++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +++.+|+.||+|++|+||||+.+|+.|++.++
T Consensus 687 ~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa 766 (1026)
T 4f9i_A 687 ASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAA 766 (1026)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999976 68999999999999999999999999999888
Q ss_pred ------cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccC
Q 004768 467 ------AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNA 539 (732)
Q Consensus 467 ------~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~ 539 (732)
.+++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|+++++|||++++ ++|+++|+++++++++|+
T Consensus 767 ~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~ 846 (1026)
T 4f9i_A 767 KVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGP 846 (1026)
T ss_dssp SCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred cccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCC
Confidence 4689999999999999999999999999999999999999999999999999998 799999999999999999
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEe
Q 004768 540 GTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQ 619 (732)
Q Consensus 540 ~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~ 619 (732)
|.++++++||+|++.+++++.++|++++++| ++++||... ...|+|++|||+.++++++.+++||+||||++|++
T Consensus 847 p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 921 (1026)
T 4f9i_A 847 SEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVP----AGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMR 921 (1026)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCC----SSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEE
T ss_pred cccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcC----CCCCceecceeeecCCCCccccCceecCcEEEEEE
Confidence 9999999999999999999999999999999 999998642 12499999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCCCCCCCCCCCCCCCCChHHHHHhh
Q 004768 620 AESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFY 698 (732)
Q Consensus 620 ~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~ 698 (732)
|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+.. ..+..||||+|.||+|. +.+|.++++.|
T Consensus 922 ~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~-~~gG~~~l~~f 1000 (1026)
T 4f9i_A 922 AKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGT-KAGGPDYLLHF 1000 (1026)
T ss_dssp ESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSC-CBTSTTTGGGG
T ss_pred eCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCC-CcCCHHHHHHh
Confidence 99999999999999999999999999999999999999999999996532 23566777889999995 46899999999
Q ss_pred heeeEEEEeccCCCCCCCCCCC
Q 004768 699 TQIKTVTQQWKDLPGNVETPTS 720 (732)
Q Consensus 699 ~~~k~v~~~~~~~~~~~~~p~~ 720 (732)
++.|+|+.++. ...|.|-.
T Consensus 1001 ~~~k~v~~~~~---~~~~~p~~ 1019 (1026)
T 4f9i_A 1001 MDPRVVTENTM---RRGFAPIE 1019 (1026)
T ss_dssp EEEEEEEEECC---BTTBCCCC
T ss_pred ceEEEEEEecc---cCCCCCcc
Confidence 99999987643 23455544
No 41
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.7e-87 Score=746.33 Aligned_cols=444 Identities=23% Similarity=0.298 Sum_probs=400.4
Q ss_pred CCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHH
Q 004768 266 STNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVA 344 (732)
Q Consensus 266 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~ 344 (732)
.+.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..++. .|+..+++.+++++...
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999997 48888888888877654
Q ss_pred HhhcCcee-c--ccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcC
Q 004768 345 TLQIGEFV-S--NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG 421 (732)
Q Consensus 345 ~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~ag 421 (732)
........ . ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a- 173 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY- 173 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-
Confidence 33322111 1 1112346788999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHH
Q 004768 422 LPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAG 501 (732)
Q Consensus 422 lP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~ 501 (732)
+|+|++|+|+|+.+.+.+|+.| +|++|+||||+.+|+.|++.++++++|+++|||||+|+||++|||++.|++.+++++
T Consensus 174 lP~gvv~vv~g~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~ 252 (469)
T 3sza_A 174 LDKDLYPVINGGVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252 (469)
T ss_dssp SCTTTSCBCCCSHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHH
T ss_pred CCcceEEEEECCHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHH
Confidence 9999999999987778888888 899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCccc
Q 004768 502 FGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNI 580 (732)
Q Consensus 502 ~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~ 580 (732)
|.|+||.|++++|||||+++ ++|+++|.++++++ .|++.++++++||++++++++++.++| +|+++++||...
T Consensus 253 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~ 326 (469)
T 3sza_A 253 FMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD 326 (469)
T ss_dssp HGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE
T ss_pred HhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC
Confidence 99999999999999999999 79999999999988 599999999999999999999999998 599999999752
Q ss_pred CCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeE
Q 004768 581 LVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQ 660 (732)
Q Consensus 581 ~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~ 660 (732)
..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|+
T Consensus 327 -----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~ 401 (469)
T 3sza_A 327 -----AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGG 401 (469)
T ss_dssp -----TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSE
T ss_pred -----CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcce
Confidence 368999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCC-CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEecc--CC-CCCCCCCCCCCcc
Q 004768 661 VGINVPIS-VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK--DL-PGNVETPTSNSNG 724 (732)
Q Consensus 661 V~iN~~~~-~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~~--~~-~~~~~~p~~~~~~ 724 (732)
|+||++.. ...+..||||+|+||+| +++|++|+++||+.|+|..+.. +. ...+||||+..+.
T Consensus 402 V~vN~~~~~~~~~~~PfGG~k~SG~G--r~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~ 467 (469)
T 3sza_A 402 VAANDVIVHITLHSLPFGGVGNSGMG--SYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMT 467 (469)
T ss_dssp EEESCSSGGGSCTTSCBCCCGGGEEC--CBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC---
T ss_pred EEEeCCCCCCCCCCCCcCCccccccC--ccchHHHHHHhhCeeEEEECCcccccccccccCCCCcccc
Confidence 99999753 23466778889999999 6999999999999999987732 22 3468999998653
No 42
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.8e-87 Score=759.48 Aligned_cols=469 Identities=19% Similarity=0.262 Sum_probs=419.8
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-hHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRA-FSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
.+++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+.|+.++..+|.++|++++++|+++++
T Consensus 7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (534)
T 2y53_A 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRG 84 (534)
T ss_dssp ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 467899999997654 479999999999999999988 9999999999999 5999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcC-------ceecccCC-CceeEEEeecc-eeEEEecCCchh
Q 004768 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG-------EFVSNISN-GVDTYSIREPL-GVCAGICSFDFP 380 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~P~-GVv~~i~p~n~P 380 (732)
+|++++++|+|||..++..|+..+++.+++++...+...+ +..+.... ....+..++|+ |||++|+|||||
T Consensus 85 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P 164 (534)
T 2y53_A 85 DYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFP 164 (534)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchH
Confidence 9999999999999999999999999999999887665432 11111111 22357789997 999999999999
Q ss_pred hhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcC-CCCCeEEEEeCChhHHHhhhcC-CCcCEEEEeCChHHH
Q 004768 381 AMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG-LPNGVLNIVHGTDDIINAICDD-DDVKAIALVGPNSDV 458 (732)
Q Consensus 381 ~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~ag-lP~g~v~vv~g~~~~~~~L~~~-~~v~~v~ftGs~~~g 458 (732)
+.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|++.. +..+ +++++|+||||+.+|
T Consensus 165 ~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~---l~~~l~~vd~V~FTGS~~~G 241 (534)
T 2y53_A 165 SWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG---LLDQIRSFDVVSFTGSADTA 241 (534)
T ss_dssp THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT---SGGGCCTTCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH---HHhcccccCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999 899999999986531 3332 579999999999999
Q ss_pred HHHHHHhh--cCCCcEEEeCCCCCeEEEccCC-----CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHH
Q 004768 459 ADIYSRAS--AKGKRIQCNIGAKNHAVVMPDA-----SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVE 530 (732)
Q Consensus 459 ~~i~~~aa--~~~~~v~~elgG~~p~iV~~da-----Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~ 530 (732)
+.|++.++ +++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.+
T Consensus 242 ~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 321 (534)
T 2y53_A 242 ATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKA 321 (534)
T ss_dssp HHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHH
Confidence 99998764 8899999999999999999999 999999999999999999999999999999998 799999999
Q ss_pred HHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCC--CCCCCceEeeEEEecCCCC--Cccc
Q 004768 531 HAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP--GYENGNFIGPTILSDVTVN--MECY 606 (732)
Q Consensus 531 ~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~--~~~~g~~~~Ptil~~~~~~--~~~~ 606 (732)
+++++++|+|.++++++|||+++++++++.++|+++ .+|+++++||...... ....|+|++||||.+++++ |.++
T Consensus 322 ~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~ 400 (534)
T 2y53_A 322 KLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLH 400 (534)
T ss_dssp HHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTT
T ss_pred HHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHH
Confidence 999999999999999999999999999999999999 6899999998642110 1135899999999999877 6899
Q ss_pred ccccccceeEeEecC---CH-----HHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhc--ceeEEEECCCCC--------
Q 004768 607 KEDVFGPVLLCMQAE---SI-----DEAIEIVNRNRHGSGASIFTTSAVAARKFQIEI--AVGQVGINVPIS-------- 668 (732)
Q Consensus 607 ~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l--~~G~V~iN~~~~-------- 668 (732)
+||+||||++|++|+ |+ +|||+++|+++|||+++|||+|.+.++++++++ ++|+|+||++..
T Consensus 401 ~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~ 480 (534)
T 2y53_A 401 DVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHG 480 (534)
T ss_dssp TCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSS
T ss_pred hCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccC
Confidence 999999999999999 99 999999999999999999999999999999999 899999998532
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-ChHHHHHhhheeeEEEEe
Q 004768 669 VQPPFTLFTSSKPCFAGDLNC-DGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 669 ~~~p~g~~gg~~~sg~G~~~~-~g~~g~~~~~~~k~v~~~ 707 (732)
...+..||||+|.||+| ++ +|.+|+++|++.|++...
T Consensus 481 ~~~~~~pfGG~k~SG~G--r~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 481 NVMPMSLHGGPGRAGGG--EELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp CCCTTSEECCSGGGCSC--CEESGGGGGGGGEEEEEEEEE
T ss_pred CCCCCCCCCCcccCCCC--CCcchHHHHHHHhhhheeecC
Confidence 12456778899999999 57 799999999999998764
No 43
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=2.7e-86 Score=736.60 Aligned_cols=443 Identities=19% Similarity=0.264 Sum_probs=394.5
Q ss_pred CeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHH
Q 004768 247 TSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDA 326 (732)
Q Consensus 247 ~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 326 (732)
..+++.||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+|||..++
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHHHhHHHHHHHHHHhhcCc-eecc--cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecC
Q 004768 327 Y-NDVLRGLEIVEHACGVATLQIGE-FVSN--ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKP 402 (732)
Q Consensus 327 ~-~ev~~~~~~l~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkp 402 (732)
+ .|+..+++.+++++...+..... .... ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP 165 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 8 59999999999998876654432 1111 113456788999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeE
Q 004768 403 SEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHA 482 (732)
Q Consensus 403 s~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~ 482 (732)
|+.+|+++..|++++.++ +|+|++|+|+|+.+.+.+|+. ++|++|+||||+.+|+.|++.++++++|+++|||||+|+
T Consensus 166 s~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~ 243 (457)
T 3lns_A 166 SETTPETSAVIEKIIAEA-FAPEYVAVIQGGRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPL 243 (457)
T ss_dssp CTTCHHHHHHHHHHHHHH-CCTTTEEECCCCHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEE
T ss_pred CCCChHHHHHHHHHHHHh-CCHhhEEEecCCHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCC
Confidence 999999999999999999 999999999997788999998 699999999999999999999999999999999999999
Q ss_pred EEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHH
Q 004768 483 VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCR 561 (732)
Q Consensus 483 iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~ 561 (732)
||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.+++++++ |.++ ++||++++++++++.+
T Consensus 244 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~ 318 (457)
T 3lns_A 244 IVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVS 318 (457)
T ss_dssp EECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHH
T ss_pred eECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999998 799999999999887 5555 9999999999999999
Q ss_pred HHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHc-CCCCcEEE
Q 004768 562 LIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNR-NRHGSGAS 640 (732)
Q Consensus 562 ~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~glsas 640 (732)
+|+++ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+ ++|||+++
T Consensus 319 ~i~~a---~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~ 390 (457)
T 3lns_A 319 LLEAT---QGQVLVGSQAD-----VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVY 390 (457)
T ss_dssp HHHHC---CSEEEECCCEE-----GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEE
T ss_pred HHHhc---CCeEEeCCccC-----CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEE
Confidence 99985 35999998642 36899999999999999999999999999999999999999999999 99999999
Q ss_pred EeCCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 641 IFTTSAVAARKFQIEIAVGQVGINVPIS-VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 641 v~t~d~~~~~~~~~~l~~G~V~iN~~~~-~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|||+|.+.++++++++++|+|+||++.. ...+..||||+|.||+| +++|++|+++|++.|+|..
T Consensus 391 v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 391 VFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMG--EYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp EECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEEC--CBSHHHHHHHTEEEEEEEE
T ss_pred EECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCC--CCchHHHHHHhhCeeEEEe
Confidence 9999999999999999999999999753 23566778889999999 6999999999999999874
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.9e-84 Score=729.17 Aligned_cols=467 Identities=18% Similarity=0.217 Sum_probs=413.6
Q ss_pred CCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEE-EEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHh
Q 004768 228 NPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVS-QVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRR 306 (732)
Q Consensus 228 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~-~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~ 306 (732)
++...++||||+|+.+.+ ++||+||++++ +++.++.+|+++|+++|++||..|+.++..+|.++|++++++|++
T Consensus 26 ~~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3v4c_A 26 FTPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEA 100 (528)
T ss_dssp CCCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 345678999999998753 99999999998 999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHh--hcCceec----c--cCCCceeEEEeecceeEEEecCCc
Q 004768 307 DMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATL--QIGEFVS----N--ISNGVDTYSIREPLGVCAGICSFD 378 (732)
Q Consensus 307 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~--~~~~~~~----~--~~~~~~~~~~~~P~GVv~~i~p~n 378 (732)
+.++|++++++|+|||..+++.|+..+++.+++++...+. ..+.... . ...+...++.++|+|||++|+|||
T Consensus 101 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 180 (528)
T 3v4c_A 101 RAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASN 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSS
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCc
Confidence 9999999999999999999999999999999999987765 2222111 0 012334678999999999999999
Q ss_pred hhhhhHH--HHHHHHhhcCCeEEecCCCCChHHHHHHHHHH----HHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEE
Q 004768 379 FPAMTPL--WMFPIAVTCGNTFILKPSEKVPGAAVILAELA----VEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIAL 451 (732)
Q Consensus 379 ~P~~~~~--~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l----~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~f 451 (732)
||+.+.+ +++++||++||+||+|||+.+|+++..|++++ .++|+|+|++|+|+|.+ +.+.+|+.||+|++|+|
T Consensus 181 ~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~f 260 (528)
T 3v4c_A 181 FPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF 260 (528)
T ss_dssp STTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEE
T ss_pred chHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 9999855 89999999999999999999999999888865 57899999999999965 78999999999999999
Q ss_pred eCChHHHHHHHHHhhcCC--CcEEEeCCCCCeEEEccCC---CHHHHHHHHHHHHHcCCCCcccCCceeEEecC-c-hhh
Q 004768 452 VGPNSDVADIYSRASAKG--KRIQCNIGAKNHAVVMPDA---SIDATLSALVAAGFGGAGQKCMALTTVVYVGG-I-TPW 524 (732)
Q Consensus 452 tGs~~~g~~i~~~aa~~~--~~v~~elgG~~p~iV~~da---Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~-~-~~f 524 (732)
|||+.+|+.|++.+++++ +|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ + ++|
T Consensus 261 TGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f 340 (528)
T 3v4c_A 261 TGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRF 340 (528)
T ss_dssp ESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHH
T ss_pred ECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHH
Confidence 999999999999999998 9999999999999999999 88999999999999999999999999999997 7 799
Q ss_pred HHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCC--
Q 004768 525 EDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVN-- 602 (732)
Q Consensus 525 ~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~-- 602 (732)
+++|++++++++.| +.+||++++++.+++++++. +.|+++++||.. .|+|++|||+.+++++
T Consensus 341 ~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~-------~g~~~~PTvl~~~~~~~~ 404 (528)
T 3v4c_A 341 TTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES-------SGRDASPNLFETTGAQFL 404 (528)
T ss_dssp HHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC-------CTTEECCEEEEEEHHHHH
T ss_pred HHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc-------CCceeccEEEEecCcccc
Confidence 99999999988643 57899999888888887764 479999999863 6899999999988877
Q ss_pred -CcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCC--CHHHHHHHHhhcc--eeEEEECCCCCC--CCCCCC
Q 004768 603 -MECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTT--SAVAARKFQIEIA--VGQVGINVPISV--QPPFTL 675 (732)
Q Consensus 603 -~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~--d~~~~~~~~~~l~--~G~V~iN~~~~~--~~p~g~ 675 (732)
|.+++||+||||++|++|+|++|||+++|+++|||+++|||+ |.+.+++++++++ +|+|+||++... ..+..|
T Consensus 405 ~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~p 484 (528)
T 3v4c_A 405 ADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMV 484 (528)
T ss_dssp HCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCC
T ss_pred cChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCC
Confidence 899999999999999999999999999999999999999999 8899999999998 999999996431 235667
Q ss_pred CCC-CCCCCCCCCCCChHHHHHhhheeeEEEEeccCCCCCCCCCC
Q 004768 676 FTS-SKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVETPT 719 (732)
Q Consensus 676 ~gg-~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~~~~~~~~~~p~ 719 (732)
||| +|.||+|++..+|++|+++|++.|++. .+|....|+.
T Consensus 485 fGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q----~~p~~llp~~ 525 (528)
T 3v4c_A 485 HGGPYPASTNFGATSVGTMSIRRFLRPVAYQ----NMPEDLLPED 525 (528)
T ss_dssp CCCTTTTBSCTTCCSSSGGGGGGGEEEEEEE----SCCGGGSCTT
T ss_pred CCCCCCCCCCCCCCCCcHHHHHHhchhHHhh----cCCcccCCHh
Confidence 778 889999953335999999999998754 3444445543
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=5.3e-82 Score=710.89 Aligned_cols=444 Identities=15% Similarity=0.176 Sum_probs=395.3
Q ss_pred CCCCeEEeecCCCCCEE-EEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCC
Q 004768 244 KSLTSIDVVNPATQLIV-SQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKT 322 (732)
Q Consensus 244 ~~~~~~~v~~P~~g~~~-~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~ 322 (732)
.++.+++++||+||+++ ++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||
T Consensus 4 ~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 83 (510)
T 1ez0_A 4 QTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALP 83 (510)
T ss_dssp -CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred CCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Confidence 34567999999999999 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHh--hcCceecc----c-CCC-ceeEEEeecceeEEEecCCchhhhhH--HHHHHHHh
Q 004768 323 LTDAYNDVLRGLEIVEHACGVATL--QIGEFVSN----I-SNG-VDTYSIREPLGVCAGICSFDFPAMTP--LWMFPIAV 392 (732)
Q Consensus 323 ~~~a~~ev~~~~~~l~~~~~~~~~--~~~~~~~~----~-~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l~~AL 392 (732)
..++..|+..+++.+++++...+. ..+..... . ..+ ...++.++|+|||++|+|||||+... .+++++||
T Consensus 84 ~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~AL 163 (510)
T 1ez0_A 84 EVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASAL 163 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHH
Confidence 999999999999999999887664 22322210 0 112 13578899999999999999999984 49999999
Q ss_pred hcCCeEEecCCCCChHHHHHHHHHH----HHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 393 TCGNTFILKPSEKVPGAAVILAELA----VEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 393 aaGN~VVlkps~~~~~~~~~l~~~l----~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||+||+|||+.+|+++..|++++ .++|+|+|++|+|+|. .+.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 164 aaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 243 (510)
T 1ez0_A 164 AAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE 243 (510)
T ss_dssp HHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhc
Confidence 9999999999999999999999988 5689999999999995 5789999999999999999999999999999998
Q ss_pred CC--CcEEEeCCCCCeEEEccCCCHH--HHHHHHHHHHHcCCCCcccCCceeEEecC-c-hhhHHHHHHHHhcccccCCC
Q 004768 468 KG--KRIQCNIGAKNHAVVMPDASID--ATLSALVAAGFGGAGQKCMALTTVVYVGG-I-TPWEDKLVEHAKAIKVNAGT 541 (732)
Q Consensus 468 ~~--~~v~~elgG~~p~iV~~daDl~--~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~-~-~~f~~~l~~~~~~l~~g~~~ 541 (732)
++ +|+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ + ++|+++|.++++++++
T Consensus 244 ~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---- 319 (510)
T 1ez0_A 244 RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP---- 319 (510)
T ss_dssp SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC----
T ss_pred cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC----
Confidence 86 9999999999999999999999 99999999999999999999999999999 8 7999999999998863
Q ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHH-cCCEEEecCcccCCCCCCCCceEeeEEEecCCCC---CcccccccccceeEe
Q 004768 542 ESNADLGPVISKQEKERMCRLIQVDTE-SGAKLLLDGRNILVPGYENGNFIGPTILSDVTVN---MECYKEDVFGPVLLC 617 (732)
Q Consensus 542 ~~~~~~gpli~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~---~~~~~~E~fgPvl~v 617 (732)
||++++...+++.++|+++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||++|
T Consensus 320 ------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v 385 (510)
T 1ez0_A 320 ------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLI 385 (510)
T ss_dssp ------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEE
T ss_pred ------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeEEE
Confidence 688889999999999999984 7999999985 2899999999987777 999999999999999
Q ss_pred EecCCHHHHHHHHHcCCCCcEEEEeCCCH--HHHHHHHhhc--ceeEEEECCCCCC--CCCCCCCCC-CCCCCCCCCCCC
Q 004768 618 MQAESIDEAIEIVNRNRHGSGASIFTTSA--VAARKFQIEI--AVGQVGINVPISV--QPPFTLFTS-SKPCFAGDLNCD 690 (732)
Q Consensus 618 ~~~~~~~eai~~~n~~~~glsasv~t~d~--~~~~~~~~~l--~~G~V~iN~~~~~--~~p~g~~gg-~~~sg~G~~~~~ 690 (732)
++|+|++|||+++|+++|||+++|||+|. ..++++++++ ++|+|+||++... ..+..+||| .|.||+|+.+++
T Consensus 386 ~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~ 465 (510)
T 1ez0_A 386 VVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSV 465 (510)
T ss_dssp EEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSS
T ss_pred EEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCc
Confidence 99999999999999999999999999987 7899999999 7999999986421 123344445 455666643468
Q ss_pred hHHHHHhhheeeEEE
Q 004768 691 GKGGIHFYTQIKTVT 705 (732)
Q Consensus 691 g~~g~~~~~~~k~v~ 705 (732)
|++|+++|++.|++.
T Consensus 466 G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 466 GAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SGGGGGGGEEEEEEE
T ss_pred cHHHHHHhheEEEEc
Confidence 999999999998765
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.2e-80 Score=736.33 Aligned_cols=436 Identities=21% Similarity=0.299 Sum_probs=404.8
Q ss_pred EeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHH
Q 004768 263 VPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACG 342 (732)
Q Consensus 263 v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~ 342 (732)
++.++.+|++.|+++|++||..|+.++..+|.++|+++++.|+++.++|+++++.|+|||..++..|+..+++.+++++.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhhcCcee-cccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcC
Q 004768 343 VATLQIGEFV-SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG 421 (732)
Q Consensus 343 ~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~ag 421 (732)
..+...+... .....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.++|
T Consensus 624 ~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAG 703 (1001)
T 3haz_A 624 QGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAG 703 (1001)
T ss_dssp HHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred HHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhC
Confidence 8776555322 223346678889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC---CCcEEEeCCCCCeEEEccCCCHHHHHHHHH
Q 004768 422 LPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAK---GKRIQCNIGAKNHAVVMPDASIDATLSALV 498 (732)
Q Consensus 422 lP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~---~~~v~~elgG~~p~iV~~daDl~~aa~~iv 498 (732)
+|+|++|+|+|+++.+.+|+.||+|++|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||++.|++.++
T Consensus 704 lP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv 783 (1001)
T 3haz_A 704 IPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVV 783 (1001)
T ss_dssp CCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHH
T ss_pred cCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHH
Confidence 99999999999875599999999999999999999999999988864 899999999999999999999999999999
Q ss_pred HHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecC
Q 004768 499 AAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDG 577 (732)
Q Consensus 499 ~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg 577 (732)
+|+|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++.+++++.++|+++++.| ++ +||
T Consensus 784 ~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg 861 (1001)
T 3haz_A 784 TSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFA 861 (1001)
T ss_dssp HHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEE
T ss_pred HHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-ecc
Confidence 99999999999999999999998 7999999999999999999999999999999999999999999999888 88 887
Q ss_pred cccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCC--HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhh
Q 004768 578 RNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES--IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIE 655 (732)
Q Consensus 578 ~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~ 655 (732)
... ..|+|+.|||+.. .++.+++||+||||++|++|++ ++|||+++|+++|||+++|||+|.+.+++++++
T Consensus 862 ~~~-----~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~ 934 (1001)
T 3haz_A 862 GPA-----PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDR 934 (1001)
T ss_dssp CCC-----CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHH
T ss_pred ccC-----CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHh
Confidence 641 3599999999974 6789999999999999999996 899999999999999999999999999999999
Q ss_pred cceeEEEECCCCCC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 656 IAVGQVGINVPISV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 656 l~~G~V~iN~~~~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
+++|+|+||+++.. ..+..||||+|.||+|. +.+|++|+++|++.|+|+.+.
T Consensus 935 l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~-~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 935 VQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGP-KAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp CCCSEEEESSCSCCCCTTTSCBCCCGGGBCCC-CBTSTTSGGGGEEEEEEEEEC
T ss_pred CCeeeEEEeCCCcCCCCCCCCCCCcccCcCCC-CCCCHHHHHHhceeeEEEECC
Confidence 99999999997533 23455778889999995 468999999999999998764
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-76 Score=656.86 Aligned_cols=419 Identities=15% Similarity=0.139 Sum_probs=337.8
Q ss_pred EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHh-------CCC
Q 004768 250 DVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEH-------GKT 322 (732)
Q Consensus 250 ~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~-------Gk~ 322 (732)
-++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 5889999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred HH----HHHHHHHHHHhHHHHHHHHHHhhcCceeccc--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCC
Q 004768 323 LT----DAYNDVLRGLEIVEHACGVATLQIGEFVSNI--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGN 396 (732)
Q Consensus 323 ~~----~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN 396 (732)
.. ++..|+..+++.+++++.......+...... ..+...++.++|+|||++|+||| |+..+ +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 88 4678999999999999977665555543211 13455688999999999999887 77666 89999999999
Q ss_pred eEEecCCCCChHHHHHHHHHHHHc----CCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcE
Q 004768 397 TFILKPSEKVPGAAVILAELAVEA----GLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472 (732)
Q Consensus 397 ~VVlkps~~~~~~~~~l~~~l~~a----glP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v 472 (732)
+||+|||+.+|+++..|++++.++ | |+|++|+|+|+.+++..|+.||+|++|+||||+.+|+.|++.++ +||+
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv 244 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPV 244 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCB
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCE
Confidence 999999999999999999999999 9 99999999995578999999999999999999999999999887 8999
Q ss_pred EEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCC
Q 004768 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVIS 552 (732)
Q Consensus 473 ~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~ 552 (732)
++|||||+|+||++|||++.|++.+++++|.| ||.|+++++||||+++.+ ||+
T Consensus 245 ~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------~p~-- 297 (463)
T 2h5g_A 245 MGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------TPL-- 297 (463)
T ss_dssp CSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT------------------------SHH--
T ss_pred EEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc------------------------hHH--
Confidence 99999999999999999999999999999999 999999999999998733 333
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHc
Q 004768 553 KQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNR 632 (732)
Q Consensus 553 ~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 632 (732)
+++++++++++|++++.|+... ..|+|+ +++|.+++||+||||++|++|+|++|||+++|+
T Consensus 298 ------~~~~i~~~~~~Ga~v~~G~~~~-----~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~ 358 (463)
T 2h5g_A 298 ------FDQIIDMLRVEQVKIHAGPKFA-----SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHK 358 (463)
T ss_dssp ------HHHHHHHHHHTTCEEEECHHHH-----C-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHH
T ss_pred ------HHHHHHHHHhCCCEEEeCCccc-----ccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHc
Confidence 2345788888999998554321 234443 568999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCC--ChHHHHHhhheeeEEEEeccC
Q 004768 633 NRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNC--DGKGGIHFYTQIKTVTQQWKD 710 (732)
Q Consensus 633 ~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~--~g~~g~~~~~~~k~v~~~~~~ 710 (732)
++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|+||+|.+++ +|++|+++|++.|+|...+.
T Consensus 359 ~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~- 436 (463)
T 2h5g_A 359 YGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRF-SDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD- 436 (463)
T ss_dssp HCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG-CSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS-
T ss_pred CCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC-CCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC-
Confidence 9999999999999999999999999999999987532 3556777889999994334 89999999999999986642
Q ss_pred CCCCCCCCCCCCcc
Q 004768 711 LPGNVETPTSNSNG 724 (732)
Q Consensus 711 ~~~~~~~p~~~~~~ 724 (732)
..+ |||+.++.
T Consensus 437 --~~r-~~y~~~~~ 447 (463)
T 2h5g_A 437 --HVV-SDFSEHGS 447 (463)
T ss_dssp --CCG-GGGSTTSS
T ss_pred --ccc-CCccccch
Confidence 233 89987653
No 48
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=8.1e-74 Score=635.64 Aligned_cols=403 Identities=14% Similarity=0.115 Sum_probs=323.1
Q ss_pred HHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCH----HHHH-HHHHH-HHhHHHHHHHH
Q 004768 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTL----TDAY-NDVLR-GLEIVEHACGV 343 (732)
Q Consensus 270 ~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~-~ev~~-~~~~l~~~~~~ 343 (732)
.+++|+++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||. .++. .|+.. +++.+++++..
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 389999999999999999999999999999999999999999999999999998 8884 78888 88889988876
Q ss_pred HHhhc------Cceeccc--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHH
Q 004768 344 ATLQI------GEFVSNI--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAE 415 (732)
Q Consensus 344 ~~~~~------~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~ 415 (732)
.+... +...+.. ..+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..|++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 65544 3322211 12455688999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHH----H----cCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEcc
Q 004768 416 LAV----E----AGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486 (732)
Q Consensus 416 ~l~----~----aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~ 486 (732)
++. + +|+|+|++|+|+ +. +.++.|+.||+||+|+||||+.+|+.|++.+ +||+++|||||+|+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 8 999999999999 65 6889999999999999999999999998766 799999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCchhhHHHHHHHHhcccc---cCCCCCCCCcCCCCCHHHHHHHHHH-
Q 004768 487 DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKV---NAGTESNADLGPVISKQEKERMCRL- 562 (732)
Q Consensus 487 daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~---g~~~~~~~~~gpli~~~~~~~~~~~- 562 (732)
|||++.|++.+++++|.|+| .|+++++||||+++++|+++|.++++++++ |+|.+ +++
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~id~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~ 310 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETLLINPKFSKWWEVLENLTLEGGVTIHATKDL-----------------KTAY 310 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHHCCCBEECHHH-----------------HHHH
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCHHHHHHHHHHHHHhcCCeecCCHHH-----------------hccc
Confidence 99999999999999999999 999999999999887799999999999886 76532 344
Q ss_pred HHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEe
Q 004768 563 IQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642 (732)
Q Consensus 563 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~ 642 (732)
|++++ ++++||. | +.||++ +++++.+++||+||||++|++|+|++|||+++|+++|||+++||
T Consensus 311 i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 373 (468)
T 1vlu_A 311 FDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIV 373 (468)
T ss_dssp HHHHH----HHTCCCH---------H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEE
T ss_pred ccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 66554 3555653 4 688887 78899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCC-----CCCCCCCCCCCCChHHHHHhhheeeEEEEeccCCCCCCCC
Q 004768 643 TTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFT-----SSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVET 717 (732)
Q Consensus 643 t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~g-----g~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~~~~~~~~~~ 717 (732)
|+|.+.++++++++++|+|+||++... .+.++|| |.|.||+| ++ |++|+++|++.|+|.... . ..+ |
T Consensus 374 t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~pfG~Gg~~G~~~SG~g--~~-G~~gl~~f~~~K~v~~~~--~-~~r-~ 445 (468)
T 1vlu_A 374 TENKANAEKFMKGVDSSGVYWNASTRF-ADGFRYGFGAEVGISTSKIH--AR-GPVGLDGLVSYQYQIRGD--G-QVA-S 445 (468)
T ss_dssp CSCHHHHHHHHHHCCCSEEEESSCGGG-CC-------------------------CCSGGGEEEEEEEECS--S-CCS-C
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCCCCCCCCcceecCCCC--CC-cchHHHHhcceEEEEECC--C-CcC-c
Confidence 999999999999999999999986532 2333444 99999999 57 999999999999998653 2 233 9
Q ss_pred CCCC
Q 004768 718 PTSN 721 (732)
Q Consensus 718 p~~~ 721 (732)
||+.
T Consensus 446 py~~ 449 (468)
T 1vlu_A 446 DYLG 449 (468)
T ss_dssp CC--
T ss_pred cccc
Confidence 9984
No 49
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.4e-72 Score=627.67 Aligned_cols=415 Identities=18% Similarity=0.216 Sum_probs=359.5
Q ss_pred EeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHH
Q 004768 263 VPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHAC 341 (732)
Q Consensus 263 v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~ 341 (732)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++. +...+++.+..++
T Consensus 6 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~~ 85 (464)
T 3k9d_A 6 KDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYI 85 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhh
Confidence 445678999999999999999999999999999999999999999999999999999999988764 3334444333322
Q ss_pred HHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHH----HHH
Q 004768 342 GVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILA----ELA 417 (732)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~----~~l 417 (732)
... ...+.. ....+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++ +++
T Consensus 86 ~~~-~~~g~~--~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~ 162 (464)
T 3k9d_A 86 KDM-KTIGML--KEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAA 162 (464)
T ss_dssp TTC-CCSEEE--EEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred hcc-ccccee--ccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHH
Confidence 211 111111 1123556788999999999999999999999999999999999999999999999998755 556
Q ss_pred HHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCC-CCCeEEEccCCCHHHHHH
Q 004768 418 VEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIG-AKNHAVVMPDASIDATLS 495 (732)
Q Consensus 418 ~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elg-G~~p~iV~~daDl~~aa~ 495 (732)
.++|+|+|++|+|+|. .+.+++|+.||+|++|+||||+.+ ++.+++++||+ +|+| ||+|+||++|||++.|++
T Consensus 163 ~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa~ 237 (464)
T 3k9d_A 163 EKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAVK 237 (464)
T ss_dssp HHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHHH
T ss_pred HHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHHH
Confidence 8999999999999995 588999999999999999999974 56677889999 7888 999999999999999999
Q ss_pred HHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHH-------hcccccCCC-CCCCCcCCCCCHHHHHHHHHHHHHH
Q 004768 496 ALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHA-------KAIKVNAGT-ESNADLGPVISKQEKERMCRLIQVD 566 (732)
Q Consensus 496 ~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~-------~~l~~g~~~-~~~~~~gpli~~~~~~~~~~~i~~a 566 (732)
.|++++|+|+||.|+++++|||++++ ++|+++|.++. +.+++|++. ++++++||+++.++++++.++++.+
T Consensus 238 ~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a 317 (464)
T 3k9d_A 238 HILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLT 317 (464)
T ss_dssp HHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCC
T ss_pred HHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhh
Confidence 99999999999999999999999998 68999999875 456788887 7788999999999999999999988
Q ss_pred HHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHH----HHHHcCCCCcEEEEe
Q 004768 567 TESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI----EIVNRNRHGSGASIF 642 (732)
Q Consensus 567 ~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~glsasv~ 642 (732)
+..|+++++||.. ++++++++. +|+||||++|++|+|++||| +++|+++|||+++||
T Consensus 318 ~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~ 378 (464)
T 3k9d_A 318 VPADARVLIAEET------------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIH 378 (464)
T ss_dssp CCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred hcCCCEEEEcCCC------------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 8899999999853 466777765 89999999999999999997 799999999999999
Q ss_pred CCCHHHHHHHHhhcceeEEEECCCCC--------CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 643 TTSAVAARKFQIEIAVGQVGINVPIS--------VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 643 t~d~~~~~~~~~~l~~G~V~iN~~~~--------~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
|+|.+.+++|++++++|+|+||++.. ...|..+||| +.+|.| .++|..|++.|++.|+|...
T Consensus 379 t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g--~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 379 SEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGS--SSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp CSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTC--SCCSBCCGGGSEEEEEEEEC
T ss_pred eCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCC--cCCCCCCHHHheEEEEEEec
Confidence 99999999999999999999999753 1345556655 556777 68999999999999999854
No 50
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.5e-70 Score=604.29 Aligned_cols=387 Identities=16% Similarity=0.207 Sum_probs=336.0
Q ss_pred HHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCH----HHHH--------HHHHHHHh
Q 004768 268 NEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTL----TDAY--------NDVLRGLE 335 (732)
Q Consensus 268 ~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~~ 335 (732)
-+++++++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+||+. .++. .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999986 4553 58999999
Q ss_pred HHHHHHHHHHhhcCceeccc--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHH
Q 004768 336 IVEHACGVATLQIGEFVSNI--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVIL 413 (732)
Q Consensus 336 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l 413 (732)
.+++++.+.+. .+...... ..+...++.++|+|||++|+||| +..+++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 99999876543 33332211 22445688899999999999986 468889999999999999999999999999999
Q ss_pred HHHHH----HcCCCCCeEEEEeC-Ch-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccC
Q 004768 414 AELAV----EAGLPNGVLNIVHG-TD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPD 487 (732)
Q Consensus 414 ~~~l~----~aglP~g~v~vv~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~d 487 (732)
++++. ++|+|+|++|+|+| +. +.+..|..||+|++|+||||+.+|+.|++.+ ++|+++|||||+|+||++|
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~d 246 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDES 246 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCC
Confidence 99997 68999999999998 44 4678888899999999999999999998876 5999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 004768 488 ASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVD 566 (732)
Q Consensus 488 aDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a 566 (732)
||++.|++.+++++|.|+| .|++++|||||+++ ++|+++|.+++++++++
T Consensus 247 ADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 297 (427)
T 1o20_A 247 ADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE---------------------------- 297 (427)
T ss_dssp SCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE----------------------------
T ss_pred CCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe----------------------------
Confidence 9999999999999999999 99999999999998 78999999999987642
Q ss_pred HHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCH
Q 004768 567 TESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646 (732)
Q Consensus 567 ~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~ 646 (732)
+.||... .+ |+ ||| ++.++.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.
T Consensus 298 -------~~gg~~~------~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 359 (427)
T 1o20_A 298 -------VRGCEKT------RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENY 359 (427)
T ss_dssp -------EEECHHH------HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCH
T ss_pred -------eecChhh------hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCH
Confidence 1233210 12 33 775 245789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCC--CCCChHHHHHhhheeeEEEEec
Q 004768 647 VAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGD--LNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 647 ~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~--~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
+.++++++++++|+|+||++... .+..||||.|+||+|. .+++|++|+++|++.|+|...+
T Consensus 360 ~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 360 SNAKKFVSEIDAAAVYVNASTRF-TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHHCCSSEEEESSCGGG-CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHHhCCccEEEECCCCcc-CCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99999999999999999986532 3456777888999973 2468999999999999998654
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=3.1e-70 Score=604.80 Aligned_cols=388 Identities=21% Similarity=0.226 Sum_probs=325.4
Q ss_pred HHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHH----HHH--------HHHHHHHh
Q 004768 268 NEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLT----DAY--------NDVLRGLE 335 (732)
Q Consensus 268 ~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~ev~~~~~ 335 (732)
.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+||+.. +++ .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999854 444 26888888
Q ss_pred HHHHHHHHHHhhcCceecc--cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHH
Q 004768 336 IVEHACGVATLQIGEFVSN--ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVIL 413 (732)
Q Consensus 336 ~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l 413 (732)
.+++++.+.+. .+...+. ...+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..|
T Consensus 105 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 89988776542 2333322 123556788999999999999998 8 58889999999999999999999999999999
Q ss_pred HHHH----HHcCCCCCeEEEEeCC-h-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccC
Q 004768 414 AELA----VEAGLPNGVLNIVHGT-D-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPD 487 (732)
Q Consensus 414 ~~~l----~~aglP~g~v~vv~g~-~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~d 487 (732)
++++ .++|+|+|++|+|+|. . ..+..|..||+|++|+||||+.+|+.|++.+ ++|+++|||||+|+||++|
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~d 258 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDR 258 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCC
Confidence 9997 7999999999999984 3 4677888899999999999999999998765 7999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccc---cCCCCCCCCcCCCCCHHHHHHHHHHH
Q 004768 488 ASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKV---NAGTESNADLGPVISKQEKERMCRLI 563 (732)
Q Consensus 488 aDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~---g~~~~~~~~~gpli~~~~~~~~~~~i 563 (732)
||++.|++.+++++|.|+| .|++++|||||+++ ++|+++|.++++++++ |+|. ..++|
T Consensus 259 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i 320 (444)
T 4ghk_A 259 ASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVL 320 (444)
T ss_dssp CCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHH
T ss_pred CCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHH
Confidence 9999999999999999999 99999999999998 7999999999999887 6532 23555
Q ss_pred HHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeC
Q 004768 564 QVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643 (732)
Q Consensus 564 ~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t 643 (732)
+++. .| ++ ++.++.+++||+||||++|++|+|++|||+++|+++|||++||||
T Consensus 321 ~~a~-------------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t 373 (444)
T 4ghk_A 321 EAAG-------------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVT 373 (444)
T ss_dssp HHTT-------------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEEC
T ss_pred Hhcc-------------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEe
Confidence 5431 11 11 245789999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCC--CCCChHHHHHhhheeeEEEEe
Q 004768 644 TSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGD--LNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 644 ~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~--~~~~g~~g~~~~~~~k~v~~~ 707 (732)
+|.+.++++++++++|+|+||++... .+..+|||.++||+|. .+++|++|+++||+.|+|...
T Consensus 374 ~d~~~a~~~a~~l~aG~V~vN~~~~~-~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~ 438 (444)
T 4ghk_A 374 EDHDRAMRFLREVDSASVMVNASTRF-ADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLG 438 (444)
T ss_dssp SBHHHHHHHHHHCCSSEEEEEECGGG-CSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEE
T ss_pred CCHHHHHHHHHhCCcceEEEcCCCcc-CCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEEC
Confidence 99999999999999999999997543 3566778889998873 357899999999999999865
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3e-69 Score=598.84 Aligned_cols=414 Identities=18% Similarity=0.246 Sum_probs=333.8
Q ss_pred EeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH-HHHHHHhHHH-HH
Q 004768 263 VPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVE-HA 340 (732)
Q Consensus 263 v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~-~~ 340 (732)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++. ++..+.+.+. ++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356889999999999999999999999999999999999999999999999999999999999975 6666666553 32
Q ss_pred HHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHH--
Q 004768 341 CGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAV-- 418 (732)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~-- 418 (732)
.. ....+. . ....+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.
T Consensus 81 ~~--~~~~g~-~-~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KD--EQTCGI-L-EEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TT--CCCSEE-C--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hh--cccccc-c-cCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 21 111111 1 11233456889999999999999999999999999999999999999999999999988887765
Q ss_pred --HcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHH
Q 004768 419 --EAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLS 495 (732)
Q Consensus 419 --~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~ 495 (732)
++|+|+|++|+|+|+ .+.+++|+.||+|++|+||||+.++ +++++++||+++|+|||+|+||++|||++.|++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~ 232 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRAVA 232 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHH
Confidence 799999999999995 4899999999999999999999854 456678999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEE
Q 004768 496 ALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLL 574 (732)
Q Consensus 496 ~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~ 574 (732)
.|++++|+|+||.|+++++||||+++ ++|+++|.++ .||++++++++++.+++.++...|+++
T Consensus 233 ~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v- 296 (452)
T 3my7_A 233 SVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI- 296 (452)
T ss_dssp HHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-
T ss_pred HHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-
Confidence 99999999999999999999999988 6788777753 389999999999999998765567776
Q ss_pred ecCcccCCCCCCCCceEeeEE-------EecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCC----CCcEEEEeC
Q 004768 575 LDGRNILVPGYENGNFIGPTI-------LSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNR----HGSGASIFT 643 (732)
Q Consensus 575 ~gg~~~~~~~~~~g~~~~Pti-------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~glsasv~t 643 (732)
+||..... ....|+|++||+ +.++++++++++ |+||||++|++|+|++|||+++|++. |||+++|||
T Consensus 297 ~G~~~~~~-~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t 374 (452)
T 3my7_A 297 VGQPATAI-AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYT 374 (452)
T ss_dssp TTCCHHHH-HHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEES
T ss_pred ecCccchh-HHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEc
Confidence 35542100 012589999997 668889999876 89999999999999999999999985 999999999
Q ss_pred CCHHHHHH---HHhhcceeEEEECCCCCCCCCCCCCCCCCC------C-----CCCCCCCChHHHHHhhheeeEEEE
Q 004768 644 TSAVAARK---FQIEIAVGQVGINVPISVQPPFTLFTSSKP------C-----FAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 644 ~d~~~~~~---~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~------s-----g~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
+|.+.+++ |++++++|+|+||++. +|||.|+..+ - .+|+....+.-+...+.+.|+|..
T Consensus 375 ~d~~~a~~i~~~a~~l~~G~V~VN~~~----~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~ 447 (452)
T 3my7_A 375 NQDVNADRIRYFGDKMKTARILINIPT----THGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAK 447 (452)
T ss_dssp CTTTCHHHHHHHHHHCCCSEEEESCCC----C----------------------------CCCCCGGGGEEEEEEEC
T ss_pred CCHHHHHHHHHHHHhCCEEEEEECCCC----CCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEe
Confidence 99777666 9999999999999975 3544443221 1 122222334456667777777763
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=95.54 E-value=3 Score=44.04 Aligned_cols=260 Identities=12% Similarity=0.101 Sum_probs=144.6
Q ss_pred ccCCCceeEEEeecceeEEEecCCc---hhhhhHHHHHHHHhhcCCe-EE-ecCCCCChHHHHHHHHHHHHcCCCCCeEE
Q 004768 354 NISNGVDTYSIREPLGVCAGICSFD---FPAMTPLWMFPIAVTCGNT-FI-LKPSEKVPGAAVILAELAVEAGLPNGVLN 428 (732)
Q Consensus 354 ~~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~l~~ALaaGN~-VV-lkps~~~~~~~~~l~~~l~~aglP~g~v~ 428 (732)
....|......+.|+--|++..|.- ||. +++..++||-.||+. +| .-|.+..... ..+.-+...+|+.+
T Consensus 116 ~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~-p~iL~AA~l~Gv~e---- 189 (423)
T 4gic_A 116 READGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELN-ALVLAAAYISGVDR---- 189 (423)
T ss_dssp ECTTSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCC-HHHHHHHHHHTCCE----
T ss_pred ccCCCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCcc-HHHHHHHHhcCCcE----
Confidence 3445666677889999999999953 653 445567889999987 33 3444321111 22223445666553
Q ss_pred EEe-CChhHHHhhh----cCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEe-CCCCCeEEEcc--CCCHHHHHHHHHHH
Q 004768 429 IVH-GTDDIINAIC----DDDDVKAIALVGPNSDVADIYSRASAKGKRIQCN-IGAKNHAVVMP--DASIDATLSALVAA 500 (732)
Q Consensus 429 vv~-g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~e-lgG~~p~iV~~--daDl~~aa~~iv~~ 500 (732)
+.. |+.+...+|. .-|.||.|+=.|..=+..+ +..-. ..|-.. ..|.+=++|.. +||.+.+|..++.-
T Consensus 190 Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~--g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQ 265 (423)
T 4gic_A 190 VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVF--GQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQ 265 (423)
T ss_dssp EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHB--TTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHH
T ss_pred EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhc--CCcCcccccccceEEEEeCCCCCHHHHHHHHHHh
Confidence 233 3334445554 3578999998888755322 11111 123332 23555555555 48999999999887
Q ss_pred HHcCCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCccc
Q 004768 501 GFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNI 580 (732)
Q Consensus 501 ~~~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~ 580 (732)
+=.... + +.++|..+ .++.+++.+.+.+..- -+... +.+.+-++ ..|
T Consensus 266 AEHd~~----a-~~iLvT~s-~~la~~V~~~i~~~l~-----------~l~r~---~i~~~sl~---~~g---------- 312 (423)
T 4gic_A 266 AEHDED----A-QAILISPD-AAHLEAVQASIERLLP-----------GMERA---EVIRTSLE---RRG---------- 312 (423)
T ss_dssp HTTCTT----C-EEEEEESC-HHHHHHHHHHHHHHGG-----------GCTTH---HHHHHHHH---HHC----------
T ss_pred hccCCC----C-eEEEEeCc-HHHHHHHHHHHHHHHh-----------hCccH---HHHHHHHh---cCc----------
Confidence 655432 2 23566543 4566666655543210 01111 11111111 011
Q ss_pred CCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcc-ee
Q 004768 581 LVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIA-VG 659 (732)
Q Consensus 581 ~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~-~G 659 (732)
.++.++|++||++++|..--= =.-|.++|+ +.+..+++ +|
T Consensus 313 -----------------------------------~ii~v~~~~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nAG 353 (423)
T 4gic_A 313 -----------------------------------GMILVDDLEQAAAVANRIAPE-HLELSVESP---EVLVESIRNAG 353 (423)
T ss_dssp -----------------------------------EEEECSSHHHHHHHHHHHCCS-EEEEESSCH---HHHGGGCCCCS
T ss_pred -----------------------------------eEEEEeehHHHHHHHHhhChH-HhhhhhCCH---HHHHhhCcEec
Confidence 355689999999999983211 245677886 45677775 89
Q ss_pred EEEECCCCC-----------CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 660 QVGINVPIS-----------VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 660 ~V~iN~~~~-----------~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.|++..++. +-+|.+ |.. |+.+.-+.+.|...-++.
T Consensus 354 aIFlG~~tp~~~GDY~aG~NHvLPT~--------G~A--r~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 354 AIFMGRYTAEALGDYCAGPNHVLPTS--------GTA--RFSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp EEEEC----------------CCCCT--------TGG--GTCCCCCGGGGEEEEEEE
T ss_pred eeecCCCCchhhhhcCcCCCccCCCC--------Ccc--cccCCCCHHHeeeeeeEE
Confidence 999987531 123333 222 455556677887765543
No 54
>2rpr_A Flywch-type zinc finger-containing protein 1; flywch domain, alternative splicing, DNA-binding, metal- binding, nucleus, metal binding protein; NMR {Homo sapiens}
Probab=94.54 E-value=0.045 Score=45.01 Aligned_cols=49 Identities=14% Similarity=0.306 Sum_probs=33.2
Q ss_pred cCcEEEEecccCCceEEEEeecCccccCCCCCCCCchhhhhccccCCccccCCceEEEEEEeCCceEEEecCCCCCCCCC
Q 004768 55 QGYVVTIKQSKRDRVVVLGCDRGGVYRNRRKPVDESSAESLRRRKTGSRLTNCPFEAVGKKDDGLWKLSIKNGAHNHEPL 134 (732)
Q Consensus 55 ~Gf~i~~~~s~~~~~~~~~C~r~g~~~~~~~~~~~~~~~~~~~r~~~s~k~gCp~~i~~~~~~~~W~v~~~~~~HNH~~~ 134 (732)
.||.....+.... ..++.|.+... .+|++++.....+ + .....|||||.
T Consensus 26 ~Gy~Y~~~~~~~~-~~yWrC~~~~~-------------------------~kCrARi~T~~~~----~-~~~~~HnH~p~ 74 (87)
T 2rpr_A 26 ESFLYRKEKAAGE-KVYWMCRDQAR-------------------------LGCRSRAITQGHR----I-MVMRSHCHQPD 74 (87)
T ss_dssp TTEEEEEEEECSS-CEEEEEGGGTT-------------------------SCCCCEEEEETTE----E-EECSCCSSCCC
T ss_pred CCEEEEeeecCCC-cEEEEecCCCC-------------------------CCCCEEEEEcCCC----E-ECCCCcCCCCc
Confidence 5777777665544 67888865431 2699999887532 3 35678999874
No 55
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=93.97 E-value=7.4 Score=41.14 Aligned_cols=256 Identities=14% Similarity=0.099 Sum_probs=145.1
Q ss_pred CceeEEEeecceeEEEecCC---chhhhhHHHHHHHHhhcCCeEEe--cCCCCChHHHHHHHHHHHHcCCCCCeEEEEe-
Q 004768 358 GVDTYSIREPLGVCAGICSF---DFPAMTPLWMFPIAVTCGNTFIL--KPSEKVPGAAVILAELAVEAGLPNGVLNIVH- 431 (732)
Q Consensus 358 ~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~VVl--kps~~~~~~~~~l~~~l~~aglP~g~v~vv~- 431 (732)
|.....++.|+.-|++..|. -|| ++++..++||-.||+.=|+ -|....|. +.-+...+|+.+ +..
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i~p~----iL~AA~l~Gv~e----Iy~v 184 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQD----VFNV 184 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCCE----EEEC
T ss_pred CcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCCCHH----HHHHHHHcCCCE----Eeec
Confidence 66666778999999999887 455 3445567889999987544 34322322 223346666553 222
Q ss_pred CChhHHHhhh----cCCCcCEEEEeCChHHHH--HHHHHhhcCCCcEEEe-CCCCCeEEEcc--CCCHHHHHHHHHHHHH
Q 004768 432 GTDDIINAIC----DDDDVKAIALVGPNSDVA--DIYSRASAKGKRIQCN-IGAKNHAVVMP--DASIDATLSALVAAGF 502 (732)
Q Consensus 432 g~~~~~~~L~----~~~~v~~v~ftGs~~~g~--~i~~~aa~~~~~v~~e-lgG~~p~iV~~--daDl~~aa~~iv~~~~ 502 (732)
|+.+...+|. .-|.||.|+=.|..=+.. ...+. .. ..|-.. ..|.+=++|.. +||.+.+|..++.-+=
T Consensus 185 GGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~--~~-G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAE 261 (434)
T 1kae_A 185 GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ--RL-DGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAE 261 (434)
T ss_dssp CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHH--CT-TSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHh--hc-CccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhc
Confidence 3334444554 357899999888764432 21111 01 123332 23565555554 4899999999888764
Q ss_pred cCCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCC
Q 004768 503 GGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582 (732)
Q Consensus 503 ~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 582 (732)
.... + +.++|..+ .++.+++.+.+.+... -+... +.++.+.
T Consensus 262 Hd~~----a-~aiLvT~s-~~la~~V~~ev~~ql~-----------~lpr~-------~ia~~sl--------------- 302 (434)
T 1kae_A 262 HGPD----S-QVILLTPA-ADMARRVAEAVERQLA-----------ELPRA-------ETARQAL--------------- 302 (434)
T ss_dssp TCTT----C-EEEEEESC-HHHHHHHHHHHHHHHT-----------TCTTH-------HHHHHHH---------------
T ss_pred cCCC----C-cEEEEECC-HHHHHHHHHHHHHHHH-----------hCChH-------HHHHHHH---------------
Confidence 4432 2 33556543 4556655555532210 00011 1111111
Q ss_pred CCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcc-eeEE
Q 004768 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIA-VGQV 661 (732)
Q Consensus 583 ~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~-~G~V 661 (732)
..- .|+.++|++||++++|..--= =.-|.++|+ +.+..+++ +|.|
T Consensus 303 -----------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp---~~~l~~I~nAGaI 348 (434)
T 1kae_A 303 -----------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNA---RELVDSITSAGSV 348 (434)
T ss_dssp -----------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTH---HHHGGGCCSCSEE
T ss_pred -----------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCH---HHHHhhcCcccch
Confidence 112 456789999999999984211 256778886 56667764 8999
Q ss_pred EECCCCC--------CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 662 GINVPIS--------VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 662 ~iN~~~~--------~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
++..++. +...-.|.+|. . |+.|.-+.+.|...-++.
T Consensus 349 FlG~~tpe~~GDY~aG~NHvLPT~G~-----A--R~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 349 FLGDWSPESAGDYASGTNHVLPTYGY-----T--ATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp EESTTCCHHHHHHTSSSCCCCCCTTG-----G--GTCCCSCGGGGEEEEEEE
T ss_pred hcCCCCchhhcccccCCCcccCCCCc-----e--eccCCCcHHhccceeeEE
Confidence 9997641 11222222222 2 455566778887765554
No 56
>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*
Probab=86.93 E-value=1.6 Score=34.55 Aligned_cols=28 Identities=21% Similarity=0.342 Sum_probs=22.4
Q ss_pred CCceEEEEEE--eCCceEEEecCCCCCCCC
Q 004768 106 NCPFEAVGKK--DDGLWKLSIKNGAHNHEP 133 (732)
Q Consensus 106 gCp~~i~~~~--~~~~W~v~~~~~~HNH~~ 133 (732)
|||++=.+.+ .+..-.++...++|||++
T Consensus 47 gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~ 76 (78)
T 1wj2_A 47 GCGVRKHVERAATDPKAVVTTYEGKHNHDL 76 (78)
T ss_dssp SCEEEEEEEEETTTTSEEEEEEESCCSSCC
T ss_pred CCCcEeeEEEEcCCCCEEEEEEeeEcCCCC
Confidence 4999877765 566777788899999986
No 57
>2xzm_O RPS13E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_O 1ysh_E 3jyv_O* 1s1h_O
Probab=85.84 E-value=2.4 Score=37.67 Aligned_cols=47 Identities=28% Similarity=0.332 Sum_probs=37.7
Q ss_pred ccc-HHHHHHHHHHHHcCCChHHHHHHHHhhCC-------------------C-cccChhhHhHHHHH
Q 004768 145 RFT-EREVLLIKEMTEAGLKPRQILKRLRQSNP-------------------E-LLSTPKHVYNVKAK 191 (732)
Q Consensus 145 ~~~-~~~~~~i~~l~~~g~~~~~I~~~l~~~~~-------------------~-~~~t~kDi~N~~~~ 191 (732)
+.+ +|..+.|.+|.+.|.+|.||--+||++++ | .+-.+.|+||+..|
T Consensus 29 ~~~~eeVe~~I~klakkG~tpSqIG~iLRD~~GIp~Vk~vtG~kI~rILk~~glapeiPEDL~~LikK 96 (153)
T 2xzm_O 29 HMTPSTVVDLSVKLAKKGLTPSQIGVILRDQHGIPQVRFLTGQKILRILKKNGCAPQLPEDLYFLIKK 96 (153)
T ss_dssp CCCHHHHHHHHHHHHHTTCCHHHHHHHHHHSSCCSCHHHHHSSCHHHHHHHTTCCCSSCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCHHHhhhHHhhcCCCCCeeeeccchHHHHHHHcCCCCCCcHHHHHHHHH
Confidence 454 45678899999999999999999999983 1 24557899999776
No 58
>3u5c_N S27A, YS15, 40S ribosomal protein S13; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_O 3o30_G 3o2z_G 3u5g_N 3iz6_O 3jyv_O* 1ysh_E 1s1h_O
Probab=85.26 E-value=2.7 Score=37.40 Aligned_cols=47 Identities=23% Similarity=0.378 Sum_probs=37.4
Q ss_pred cccH-HHHHHHHHHHHcCCChHHHHHHHHhhC--CC------------------cccChhhHhHHHHH
Q 004768 145 RFTE-REVLLIKEMTEAGLKPRQILKRLRQSN--PE------------------LLSTPKHVYNVKAK 191 (732)
Q Consensus 145 ~~~~-~~~~~i~~l~~~g~~~~~I~~~l~~~~--~~------------------~~~t~kDi~N~~~~ 191 (732)
+.++ |..+.|.+|.+.|.+|.||--+||+++ |. .+-.+.|+||+..|
T Consensus 27 ~~~~eeVe~~I~klakkG~tpSqIG~iLRD~~GIp~Vk~vtG~kI~rILk~~glapeiPEDL~~LikK 94 (151)
T 3u5c_N 27 KLSSESVIEQIVKYARKGLTPSQIGVLLRDAHGVTQARVITGNKIMRILKSNGLAPEIPEDLYYLIKK 94 (151)
T ss_dssp CSCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCSCHHHHSSSCHHHHHHHTTCCCSSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCHHHhhhHHhccCCCCCeeeecccHHHHHHHhCCCCCCCcHHHHHHHHH
Confidence 4554 567889999999999999999999998 21 24557899998766
No 59
>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}
Probab=85.03 E-value=2.6 Score=33.12 Aligned_cols=29 Identities=21% Similarity=0.449 Sum_probs=23.2
Q ss_pred CCceEEEEEE--eCCceEEEecCCCCCCCCC
Q 004768 106 NCPFEAVGKK--DDGLWKLSIKNGAHNHEPL 134 (732)
Q Consensus 106 gCp~~i~~~~--~~~~W~v~~~~~~HNH~~~ 134 (732)
|||++=.+.+ ++..-.++...++|||++-
T Consensus 44 gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~p 74 (76)
T 2ayd_A 44 GCPVKKHVERSSHDTKLLITTYEGKHDHDMP 74 (76)
T ss_dssp TCCCEEEEEECSSSTTEEEEEEESCCSSCCC
T ss_pred CCCceeeEEEECCCCCEEEEEEccCcCCCCC
Confidence 5999877665 5677788889999999973
No 60
>3j20_Q 30S ribosomal protein S15P/S13E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=81.79 E-value=1.4 Score=39.73 Aligned_cols=35 Identities=20% Similarity=0.196 Sum_probs=28.5
Q ss_pred cccccccH-HHHHHHHHHHHcCCChHHHHHHHHhhC
Q 004768 141 PSARRFTE-REVLLIKEMTEAGLKPRQILKRLRQSN 175 (732)
Q Consensus 141 ~~~R~~~~-~~~~~i~~l~~~g~~~~~I~~~l~~~~ 175 (732)
|..=+.++ |..+.|.+|.+.|.+|.||--+||+++
T Consensus 23 P~W~~~~~eev~~~i~klakkG~~pSqIG~~LRD~~ 58 (158)
T 3j20_Q 23 PIWVEYTVEEIENLVVKLRKEGYSTAMIGTILRDQY 58 (158)
T ss_dssp CSSSCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHTT
T ss_pred CCCcCCCHHHHHHHHHHHHHCCCCHHHhhHHHhccC
Confidence 33334554 567889999999999999999999998
No 61
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=60.45 E-value=22 Score=29.45 Aligned_cols=44 Identities=23% Similarity=0.253 Sum_probs=31.2
Q ss_pred HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCC
Q 004768 568 ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRH 635 (732)
Q Consensus 568 ~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 635 (732)
+.|++++..|.. |.++.+.. .+-+.|+.|+|.++|.++.|+-+|
T Consensus 33 ~~gGr~l~~g~~-------------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~~Y 76 (99)
T 2fiu_A 33 RFGANFLARGGS-------------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSPEY 76 (99)
T ss_dssp HTTCEEEEESCC-------------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSHHH
T ss_pred HcCcEEEEECCC-------------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCHHH
Confidence 458888887653 55554321 236788999999999999987544
No 62
>1je8_A Nitrate/nitrite response regulator protein NARL; protein-DNA complex, two-component response regulator, helix-turn-helix, DNA bending; 2.12A {Escherichia coli} SCOP: a.4.6.2 PDB: 1zg1_A 1zg5_A
Probab=60.01 E-value=14 Score=29.33 Aligned_cols=59 Identities=24% Similarity=0.296 Sum_probs=31.8
Q ss_pred CCCCCCCCCCCCCCcccccccHHHHHHHHHHHHcCCChHHHHHHHHhhCCCcccChhhHhHHHHHHh
Q 004768 127 GAHNHEPLKDLSEHPSARRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELLSTPKHVYNVKAKLR 193 (732)
Q Consensus 127 ~~HNH~~~~~~~~~~~~R~~~~~~~~~i~~l~~~g~~~~~I~~~l~~~~~~~~~t~kDi~N~~~~~r 193 (732)
..|||++..+.........+++.+++.+.. .-.|.+.++|.+.|. ++..-|++.+.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~Lt~~e~~vl~l-~~~g~s~~eIA~~l~-------is~~tV~~~l~r~~ 61 (82)
T 1je8_A 3 GSHHHHHHGSATTERDVNQLTPRERDILKL-IAQGLPNKMIARRLD-------ITESTVKVHVKHML 61 (82)
T ss_dssp --------------CCGGGSCHHHHHHHHH-HTTTCCHHHHHHHHT-------SCHHHHHHHHHHHH
T ss_pred CccCCCCCCchHHHHHHccCCHHHHHHHHH-HHcCCCHHHHHHHHC-------cCHHHHHHHHHHHH
Confidence 467788777665556667899988866666 579999999999774 34455555544433
No 63
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=49.28 E-value=16 Score=33.75 Aligned_cols=120 Identities=13% Similarity=0.049 Sum_probs=76.4
Q ss_pred EEeecc-eeEEEecCC-chhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHH-cCCCCCeEEEEeC-ChhHHH
Q 004768 363 SIREPL-GVCAGICSF-DFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVE-AGLPNGVLNIVHG-TDDIIN 438 (732)
Q Consensus 363 ~~~~P~-GVv~~i~p~-n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~-aglP~g~v~vv~g-~~~~~~ 438 (732)
...-|. |.|+++..- .-+-...+..-...+.+|-.++- +..|+.. |.+ .|+|...++=++- +.+...
T Consensus 21 ~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~~----L~e~~Gl~v~~v~k~~eGG~pqI~ 91 (178)
T 1vmd_A 21 KIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGAL----LQEKLGLKVHRLKSGPLGGDQQIG 91 (178)
T ss_dssp EEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHHH----HHHHHCCCCEECSCGGGTHHHHHH
T ss_pred eeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHHH----HHHHhCceeEEEeecCCCCCchHH
Confidence 333443 656555444 34555555555667777887774 3445544 444 7999766653332 223334
Q ss_pred hhhcCCCcCEEEEeCC-------hHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCC
Q 004768 439 AICDDDDVKAIALVGP-------NSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAG 506 (732)
Q Consensus 439 ~L~~~~~v~~v~ftGs-------~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~G 506 (732)
.++.+-.|+.|+||=+ ..-+..|.+.|....+|+..-+ ..|+.++.+.+++..
T Consensus 92 d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 92 AMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 4555669999999866 2357889999988888886643 567778888777653
No 64
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=45.72 E-value=32 Score=23.23 Aligned_cols=43 Identities=5% Similarity=0.064 Sum_probs=33.1
Q ss_pred ccccHHHHHHHHHHHHcCCChHHHHHHHHhhCCCcccChhhHhHHHHHHh
Q 004768 144 RRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELLSTPKHVYNVKAKLR 193 (732)
Q Consensus 144 R~~~~~~~~~i~~l~~~g~~~~~I~~~l~~~~~~~~~t~kDi~N~~~~~r 193 (732)
+.++++++..|..+...|++.++|.+.+. +...-|++.+.+.+
T Consensus 4 ~~l~~~~~~~i~~~~~~g~s~~~IA~~lg-------is~~Tv~~~~~~~~ 46 (51)
T 1tc3_C 4 SALSDTERAQLDVMKLLNVSLHEMSRKIS-------RSRHCIRVYLKDPV 46 (51)
T ss_dssp CCCCHHHHHHHHHHHHTTCCHHHHHHHHT-------CCHHHHHHHHHCST
T ss_pred CCCCHHHHHHHHHHHHcCCCHHHHHHHHC-------cCHHHHHHHHhhHH
Confidence 46788899899999999999999887653 55667777766544
No 65
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=41.19 E-value=35 Score=30.72 Aligned_cols=114 Identities=9% Similarity=0.033 Sum_probs=73.1
Q ss_pred eeEEEecCC-chhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHH-cCCCCCeEEEEeC-ChhHHHhhhcCCC
Q 004768 369 GVCAGICSF-DFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVE-AGLPNGVLNIVHG-TDDIINAICDDDD 445 (732)
Q Consensus 369 GVv~~i~p~-n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~-aglP~g~v~vv~g-~~~~~~~L~~~~~ 445 (732)
|.|+++..- .-+-...+..-...+.+|-.++-= ..|+..| .+ .|+|...++=++- +.+....++.+-+
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa~~L----~e~~Gl~v~~v~k~~eGG~p~I~d~I~~ge 82 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTGNLI----SRATGMNVNAMLSGPMGGDQQVGALISEGK 82 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHHHHH----HHHHCCCCEEECCGGGTHHHHHHHHHHTTC
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHHHHH----HHHhCceeEEEEecCCCCCchHHHHHHCCC
Confidence 655555443 345555555555667778877752 2355444 44 7999776654432 2233344555569
Q ss_pred cCEEEEeCC-------hHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCC
Q 004768 446 VKAIALVGP-------NSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAG 506 (732)
Q Consensus 446 v~~v~ftGs-------~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~G 506 (732)
|+.|+||=+ ..-+..|.+.|....+|+..-+ ..|+.++.+.+++..
T Consensus 83 IdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 83 IDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred ccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 999999866 3467889899988888886643 566777777777653
No 66
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=39.81 E-value=12 Score=32.95 Aligned_cols=87 Identities=16% Similarity=0.147 Sum_probs=53.8
Q ss_pred hhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHH-cCCCCCeEEEEe-CChhHHHhhhcCCCcCEEEEeCC---
Q 004768 380 PAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVE-AGLPNGVLNIVH-GTDDIINAICDDDDVKAIALVGP--- 454 (732)
Q Consensus 380 P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~-aglP~g~v~vv~-g~~~~~~~L~~~~~v~~v~ftGs--- 454 (732)
+-...+..-...+.+|-.++- +..|+.. |.+ .|++...++=++ ++.+....++.+-+|+.|+||=+
T Consensus 16 ~~~v~~a~~~~~ll~Gf~l~A-----T~gTa~~----L~e~~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVInt~~pl~ 86 (134)
T 2xw6_A 16 EEMVAFCQRHREVLARFPLVA-----TGTTGRR----IEEATGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFRDPLT 86 (134)
T ss_dssp HHHHHHHHHTHHHHTTSCEEE-----CHHHHHH----HHHHHCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEEECCTTT
T ss_pred HHHHHHHHHHHHHhCCCEEEE-----ccHHHHH----HHHhhCceEEEEEecCCCCcchHHHHHHCCCccEEEEccCccc
Confidence 333333344445566776654 3445544 444 799987776555 43333444555569999999876
Q ss_pred ----hHHHHHHHHHhhcCCCcEEEe
Q 004768 455 ----NSDVADIYSRASAKGKRIQCN 475 (732)
Q Consensus 455 ----~~~g~~i~~~aa~~~~~v~~e 475 (732)
..-+..|.+.|....+|+..-
T Consensus 87 ~~~h~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 87 AQPHEPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp CCTTSCCSHHHHHHHHHHTCCEECS
T ss_pred CCCccchHHHHHHHHHHcCCCeEcC
Confidence 234678888888888887654
No 67
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=39.74 E-value=1.6e+02 Score=31.18 Aligned_cols=85 Identities=13% Similarity=0.081 Sum_probs=54.9
Q ss_pred HHHhhc-CCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTC-GNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaa-GN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
+.+|.. .+.-|+--....+..+..+++.+.+.|+|. ..+..+..+..+.|+.++++|.|+.+-.......+...+.+
T Consensus 36 ~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~--~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al~ 113 (444)
T 2ixa_A 36 VENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKP--AKVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAMK 113 (444)
T ss_dssp HHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCC--CEEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHHH
T ss_pred HHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCC--CceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHH
Confidence 344433 344333334455666666666666667763 22333222345677888899999998888887788888888
Q ss_pred CCCcEEEe
Q 004768 468 KGKRIQCN 475 (732)
Q Consensus 468 ~~~~v~~e 475 (732)
.+|.|.+|
T Consensus 114 aGkhV~~E 121 (444)
T 2ixa_A 114 AGKIVGME 121 (444)
T ss_dssp TTCEEEEC
T ss_pred CCCeEEEe
Confidence 88888887
No 68
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=38.20 E-value=61 Score=26.34 Aligned_cols=60 Identities=8% Similarity=0.085 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHHHH-HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHH
Q 004768 552 SKQEKERMCRLIQVDT-ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIV 630 (732)
Q Consensus 552 ~~~~~~~~~~~i~~a~-~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 630 (732)
+++.++...+....++ +.|++++..| . +.++.+.. . ..-+.|+.|+|.+.|.++.
T Consensus 15 d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~-------------~~~lEG~~---------~-~~~~viieFps~~aa~a~y 70 (94)
T 3lo3_A 15 DAEKLQQYGARVASTLAKYSGEVLVKG-S-------------VEQLHGKF---------E-HKAQVILEFPSREDAYNWY 70 (94)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEE-E-------------CEEEESCC---------C-CSEEEEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEc-c-------------cccccCCC---------C-CCeEEEEECCCHHHHHHHH
Confidence 3444444444444443 3488888776 4 33443310 1 2567899999999999999
Q ss_pred HcCCC
Q 004768 631 NRNRH 635 (732)
Q Consensus 631 n~~~~ 635 (732)
|+-.|
T Consensus 71 ~SpeY 75 (94)
T 3lo3_A 71 HSEEY 75 (94)
T ss_dssp HSHHH
T ss_pred CCHHH
Confidence 87554
No 69
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=36.23 E-value=1.5e+02 Score=27.05 Aligned_cols=39 Identities=33% Similarity=0.451 Sum_probs=29.8
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT 433 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~ 433 (732)
.-.+||-||+|..| ..|..++.++...++| +++..|-|+
T Consensus 108 v~~~~nlvVikT~P---G~A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 108 TDDSGNLAVLRTPP---GAAHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp EEEETTEEEEECST---TCHHHHHHHHHHHTCT-TEEEEEECS
T ss_pred EeecCCEEEEEeCC---CcHHHHHHHHHhCCCC-CeEEEEecC
Confidence 34679999999885 4467788888888777 578877764
No 70
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=36.14 E-value=31 Score=33.27 Aligned_cols=68 Identities=18% Similarity=0.153 Sum_probs=47.7
Q ss_pred HHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHH
Q 004768 385 LWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVA 459 (732)
Q Consensus 385 ~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~ 459 (732)
+..++..+..||-||++.++ +.....++.+|... ||.+.+++++...+- ...-..+.+.++.+..+-.
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s~~Y----~~~~~cnilgls~~v~iP~ 88 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYSSQY----EEAYRCNFLGLSPHVQIPP 88 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEESSC----CCTTTCSEEEECTTCCCCH
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccchhh----cchhheeeecCCCCcccCc
Confidence 44677788999999999876 44566677788887 999999999653321 1123456777777665543
No 71
>3ulq_B Transcriptional regulatory protein COMA; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} PDB: 2krf_A
Probab=35.08 E-value=53 Score=26.43 Aligned_cols=44 Identities=20% Similarity=0.336 Sum_probs=30.9
Q ss_pred cccccHHHHHHHHHHHHcCCChHHHHHHHHhhCCCcccChhhHhHHHHHHhh
Q 004768 143 ARRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQ 194 (732)
Q Consensus 143 ~R~~~~~~~~~i~~l~~~g~~~~~I~~~l~~~~~~~~~t~kDi~N~~~~~r~ 194 (732)
...+++.+++-+.. ...|.+.++|.+.|. ++.+-|++++.++.+
T Consensus 27 ~~~Lt~rE~~Vl~l-~~~G~s~~eIA~~L~-------iS~~TV~~~~~~i~~ 70 (90)
T 3ulq_B 27 QDVLTPRECLILQE-VEKGFTNQEIADALH-------LSKRSIEYSLTSIFN 70 (90)
T ss_dssp --CCCHHHHHHHHH-HHTTCCHHHHHHHHT-------CCHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHH-HHcCCCHHHHHHHHC-------cCHHHHHHHHHHHHH
Confidence 34788877765554 459999999999775 566777777766544
No 72
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=33.53 E-value=43 Score=28.12 Aligned_cols=45 Identities=22% Similarity=0.240 Sum_probs=30.5
Q ss_pred hhhhccccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCcEEEEecccC
Q 004768 12 HSLMMDFQSSSEFNDAPQMLPPPPGTFVDREELIQHVGDFAVSQGYVVTIKQSKR 66 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~pp~~~~F~s~e~~~~~~~~~A~~~Gf~i~~~~s~~ 66 (732)
++.||+--++.|. .-.....|+|.|+|.. ||+++|+...+..-+.
T Consensus 46 ~nPLMGWtsS~D~------~~qv~L~F~skE~Aia----yAek~G~~y~V~ep~~ 90 (108)
T 2lju_A 46 TEPLMNWTGSHDT------KQQVCLSFTTRELAIA----YAVAHKIDYTVLQDNP 90 (108)
T ss_dssp CCCCCCCSSSCCC------CCCSCEEESSHHHHHH----HHHHTTCEEEEECSSC
T ss_pred cCCCccccCCCCc------cccceEecCCHHHHHH----HHHHcCCEEEEecCCc
Confidence 3455555555542 2334579999999987 5889999887776543
No 73
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=33.29 E-value=39 Score=29.93 Aligned_cols=63 Identities=14% Similarity=0.144 Sum_probs=43.7
Q ss_pred HHHHHHcCCCCCeEEEEeCC-h----hHHHhhhcCCCcCEEEEeCCh-----HHHHHHHHHhhcCCCcEEEeC
Q 004768 414 AELAVEAGLPNGVLNIVHGT-D----DIINAICDDDDVKAIALVGPN-----SDVADIYSRASAKGKRIQCNI 476 (732)
Q Consensus 414 ~~~l~~aglP~g~v~vv~g~-~----~~~~~L~~~~~v~~v~ftGs~-----~~g~~i~~~aa~~~~~v~~el 476 (732)
++.|.+.|+|...++-++-+ . +....++.+-+|+.|++|=+. .-+..|.+.|-...+|++..+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 34557899998777766533 2 223344455689999997654 367888888888889987654
No 74
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=32.78 E-value=4.1e+02 Score=27.00 Aligned_cols=85 Identities=19% Similarity=0.108 Sum_probs=53.3
Q ss_pred hhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEe-C-C-------hhHHHhhhcCCCcCEEEEe---CChHHHH
Q 004768 392 VTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVH-G-T-------DDIINAICDDDDVKAIALV---GPNSDVA 459 (732)
Q Consensus 392 LaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~-g-~-------~~~~~~L~~~~~v~~v~ft---Gs~~~g~ 459 (732)
...|+.-++--| -..+..+...+.+.|+.-. .+|. | + .+..++|..+|+.+.|..- |+... +
T Consensus 166 ~~~G~vgivSqS---G~l~~~i~~~~~~~g~G~S--~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~ 239 (334)
T 3mwd_B 166 YRPGSVAYVSRS---GGMSNELNNIISRTTDGVY--EGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEE-Y 239 (334)
T ss_dssp TSCCSEEEEESC---HHHHHHHHHHHHHHSSCEE--EEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH-H
T ss_pred CCCCCEEEEeCc---hHHHHHHHHHHHhcCCCeE--EEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHH-H
Confidence 456887777544 3344555566677777432 2333 2 2 1567889999999999974 55554 4
Q ss_pred HHHHHhh--cCCCcEEEeCCCCCeE
Q 004768 460 DIYSRAS--AKGKRIQCNIGAKNHA 482 (732)
Q Consensus 460 ~i~~~aa--~~~~~v~~elgG~~p~ 482 (732)
..++.+. ...|||+.--.|.+..
T Consensus 240 ~~~~~~r~~~~~KPVV~~kaGrs~~ 264 (334)
T 3mwd_B 240 KICRGIKEGRLTKPIVCWCIGTCAT 264 (334)
T ss_dssp HHHHHHHTTSCCSCEEEEEECTTCC
T ss_pred HHHHHHHhhcCCCCEEEEEcCCCcc
Confidence 4444443 3579999887777654
No 75
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=32.23 E-value=38 Score=29.69 Aligned_cols=48 Identities=15% Similarity=0.284 Sum_probs=32.9
Q ss_pred CeEEEEeCChh-HHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcE
Q 004768 425 GVLNIVHGTDD-IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472 (732)
Q Consensus 425 g~v~vv~g~~~-~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v 472 (732)
|.+.+++|+.+ ....++..+++.+|.+||+......+.+.|.+.+.|+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ipv 101 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVPV 101 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCCE
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCeE
Confidence 57888878764 3233333257999999999887778877776555554
No 76
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=31.89 E-value=83 Score=27.87 Aligned_cols=65 Identities=9% Similarity=0.080 Sum_probs=41.8
Q ss_pred CCCHHHHHHHHHHHHHHH-HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHH
Q 004768 550 VISKQEKERMCRLIQVDT-ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIE 628 (732)
Q Consensus 550 li~~~~~~~~~~~i~~a~-~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 628 (732)
+.+++.+++..+....++ +.|++++..|.. +.++.+-.. |.+ .-+.|+.|+|.+.|++
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~-------------~~~lEG~~~-------e~~-~~~viieFPS~~aa~a 103 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF-------------ELMLIGPQD-------EHW-DHVFIAEYPSVAAFVE 103 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE-------------EEEEESCTT-------CCC-SEEEEEEESCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC-------------ceeEECCCC-------CCC-CeEEEEECCCHHHHHH
Confidence 456666666555555443 458898887763 344443211 111 4678999999999999
Q ss_pred HHHcCCC
Q 004768 629 IVNRNRH 635 (732)
Q Consensus 629 ~~n~~~~ 635 (732)
+.++-.|
T Consensus 104 ~y~SpeY 110 (143)
T 3hhl_A 104 MIRDPVY 110 (143)
T ss_dssp HHHCHHH
T ss_pred HHcCHHH
Confidence 9887544
No 77
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=29.97 E-value=70 Score=25.89 Aligned_cols=33 Identities=9% Similarity=0.110 Sum_probs=30.0
Q ss_pred cccHHHHHHHHHHHHcCCChHHHHHHHHhhCCC
Q 004768 145 RFTEREVLLIKEMTEAGLKPRQILKRLRQSNPE 177 (732)
Q Consensus 145 ~~~~~~~~~i~~l~~~g~~~~~I~~~l~~~~~~ 177 (732)
.+..+.+.+|.++...|-+..+|+++|..+|++
T Consensus 40 ~iA~dlR~~Vre~l~~G~Sd~eI~~~mv~RYGd 72 (90)
T 2kw0_A 40 MIATDLRQKVYELMQEGKSKKEIVDYMVARYGN 72 (90)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcCC
Confidence 566788999999999999999999999999966
No 78
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=29.31 E-value=1.2e+02 Score=26.13 Aligned_cols=74 Identities=8% Similarity=0.173 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEe-----eEEEecCCCCCcccccccccceeEeEecCCHHHHHH
Q 004768 554 QEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIG-----PTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIE 628 (732)
Q Consensus 554 ~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~-----Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 628 (732)
+..+...+++++..+.|. ++ +|..+..+ ..+..+. |+|.++.=.+ ..|..|= +.|+.++|.+||++
T Consensus 30 ~~~~~~~~~~~~l~~~G~-lv-~g~~L~~~--~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e 100 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAGH-YI-ASHALQSV--QTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQ 100 (124)
T ss_dssp HHHHHHHHHHHHHHHHTC-EE-EEEECCCG--GGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCE-EE-ecCcCCCC--cceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHH
Confidence 445566667777767774 33 33322211 1233332 3444332111 3355443 45678999999999
Q ss_pred HHHcCCCC
Q 004768 629 IVNRNRHG 636 (732)
Q Consensus 629 ~~n~~~~g 636 (732)
++...++.
T Consensus 101 ~A~~~P~~ 108 (124)
T 1s7i_A 101 IAAKIPPG 108 (124)
T ss_dssp HHTTCGGG
T ss_pred HHHhCCcc
Confidence 99987764
No 79
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=28.76 E-value=66 Score=25.69 Aligned_cols=34 Identities=9% Similarity=0.036 Sum_probs=30.2
Q ss_pred cccHHHHHHHHHHHHcCCChHHHHHHHHhhCCCc
Q 004768 145 RFTEREVLLIKEMTEAGLKPRQILKRLRQSNPEL 178 (732)
Q Consensus 145 ~~~~~~~~~i~~l~~~g~~~~~I~~~l~~~~~~~ 178 (732)
.+..+.+.+|.++...|-+..+|+++|..+|++.
T Consensus 43 ~iA~dlR~~V~~~l~~G~sd~eI~~~~v~RYG~f 76 (84)
T 2hl7_A 43 PIAADLRKQIYGQLQQGKSDGEIVDYMVARYGDF 76 (84)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCe
Confidence 5667889999999999999999999999998663
No 80
>2elh_A CG11849-PA, LD40883P; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Drosophila melanogaster}
Probab=27.77 E-value=90 Score=24.66 Aligned_cols=46 Identities=9% Similarity=0.031 Sum_probs=34.1
Q ss_pred cccccHHHHHHHHHHHHcCCChHHHHHHHHhhCCCcccChhhHhHHHHHHhhc
Q 004768 143 ARRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQG 195 (732)
Q Consensus 143 ~R~~~~~~~~~i~~l~~~g~~~~~I~~~l~~~~~~~~~t~kDi~N~~~~~r~~ 195 (732)
.++.+++.+..+..+...|.+.++|...+ .+...-||+.+++.+..
T Consensus 20 ~~~ys~e~k~~~v~~~~~g~s~~~iA~~~-------gIs~sTl~rW~k~~~~~ 65 (87)
T 2elh_A 20 LRSLTPRDKIHAIQRIHDGESKASVARDI-------GVPESTLRGWCKNEDKL 65 (87)
T ss_dssp CSSCCHHHHHHHHHHHHHTCCHHHHHHHH-------TCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCCHHHHHHHH-------CcCHHHHHHHHHHHHhc
Confidence 45788999888888888888877776533 25677889988776643
No 81
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=27.24 E-value=2.1e+02 Score=29.25 Aligned_cols=41 Identities=22% Similarity=0.333 Sum_probs=34.0
Q ss_pred HHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeC
Q 004768 436 IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNI 476 (732)
Q Consensus 436 ~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~el 476 (732)
..+.|+.++++|+|+....+.....+...+.+.+|.|++|=
T Consensus 79 ~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EK 119 (361)
T 3u3x_A 79 TAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDK 119 (361)
T ss_dssp CHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeC
Confidence 34567778899999999998888888888888888888874
No 82
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=23.58 E-value=6.4e+02 Score=26.20 Aligned_cols=44 Identities=11% Similarity=0.221 Sum_probs=28.7
Q ss_pred HHHhhhcCCCcCEEEE------eCChHHHHHHHHHhhcC--CCcEEEeCCCC
Q 004768 436 IINAICDDDDVKAIAL------VGPNSDVADIYSRASAK--GKRIQCNIGAK 479 (732)
Q Consensus 436 ~~~~L~~~~~v~~v~f------tGs~~~g~~i~~~aa~~--~~~v~~elgG~ 479 (732)
..+.++.+|.++.|+. +-...+++.|..++... .+|++..+.|.
T Consensus 292 al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~a~~~~~~~kPvvv~~~G~ 343 (397)
T 3ufx_B 292 ALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVAGT 343 (397)
T ss_dssp HHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHHHHTTTCCCSCEEEEEEEE
T ss_pred HHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHhhCCCCcEEEEccCC
Confidence 3456778888887763 23356777777665543 57887776663
No 83
>1k78_A Paired box protein PAX5; paired domain, ETS domain, transcription factor, transcription/DNA complex; 2.25A {Homo sapiens} SCOP: a.4.1.5 a.4.1.5 PDB: 1mdm_A 6pax_A
Probab=23.19 E-value=1e+02 Score=26.93 Aligned_cols=53 Identities=15% Similarity=0.110 Sum_probs=39.2
Q ss_pred cccccHHHHHHHHHHHH--cCCChHHHHHHHHhhCC---CcccChhhHhHHHHHHhhc
Q 004768 143 ARRFTEREVLLIKEMTE--AGLKPRQILKRLRQSNP---ELLSTPKHVYNVKAKLRQG 195 (732)
Q Consensus 143 ~R~~~~~~~~~i~~l~~--~g~~~~~I~~~l~~~~~---~~~~t~kDi~N~~~~~r~~ 195 (732)
.++++++.++.|..+.. ...++.+|...+.+.+. +..+...-|++.+++....
T Consensus 88 ~~~~~~~~~~~I~~~~~~~~~~s~~~i~~~l~~~~~~~~g~~~S~sTV~r~L~~~~~~ 145 (149)
T 1k78_A 88 PKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVSSINRIIRTKVQQ 145 (149)
T ss_dssp CSSSCHHHHHHHHHHHHHCTTCCHHHHHHHHHHTTSSCTTTSCCHHHHHHHHHCC---
T ss_pred CCCCCHHHHHHHHHHHHhCcchhHHHHHHHHHHhcccccCCCcCHHHHHHHHHHHhcC
Confidence 45688888888888865 46889999999977653 5678888899988765543
No 84
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=21.47 E-value=89 Score=28.36 Aligned_cols=53 Identities=25% Similarity=0.253 Sum_probs=35.4
Q ss_pred ChHHHHHHHHHHHHcCCCCCeEEEEeCChh-HHHh---hhcCCCcCEEEEeCChHHH
Q 004768 406 VPGAAVILAELAVEAGLPNGVLNIVHGTDD-IINA---ICDDDDVKAIALVGPNSDV 458 (732)
Q Consensus 406 ~~~~~~~l~~~l~~aglP~g~v~vv~g~~~-~~~~---L~~~~~v~~v~ftGs~~~g 458 (732)
....+..|++.|.+.|+......+++-+.+ ..++ ++...+.|.|+.||++..+
T Consensus 29 ~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 29 TDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp TCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 345667888999999987666667765543 3333 3332368999999998654
No 85
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=21.18 E-value=1e+02 Score=24.08 Aligned_cols=37 Identities=35% Similarity=0.511 Sum_probs=28.7
Q ss_pred hcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC
Q 004768 393 TCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT 433 (732)
Q Consensus 393 aaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~ 433 (732)
.++|-+|+|..| ..|..++.++.+.++|. ++..+-|+
T Consensus 19 ~~~n~vVikT~P---G~A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 19 DSGNLAVLRTPP---GAAHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp EETTEEEEECST---TCHHHHHHHHHHHCCTT-EEEEEECS
T ss_pred ecCCEEEEEeCC---CcHHHHHHHHHhCCCCC-eEEEEecC
Confidence 379999999885 45677888888887776 78777663
No 86
>2k27_A Paired box protein PAX-8; paired domain, solution structure, triple frequency, 3D NMR, induced FIT, alternative splicing, developmental protein; NMR {Homo sapiens}
Probab=20.82 E-value=1.3e+02 Score=26.73 Aligned_cols=53 Identities=13% Similarity=0.101 Sum_probs=40.9
Q ss_pred cccccHHHHHHHHHHHH--cCCChHHHHHHHHhhCC---CcccChhhHhHHHHHHhhc
Q 004768 143 ARRFTEREVLLIKEMTE--AGLKPRQILKRLRQSNP---ELLSTPKHVYNVKAKLRQG 195 (732)
Q Consensus 143 ~R~~~~~~~~~i~~l~~--~g~~~~~I~~~l~~~~~---~~~~t~kDi~N~~~~~r~~ 195 (732)
.++++++.++.|..+.. ..+++.+|...+.+... +..+...-|++.+++.+..
T Consensus 81 ~~~~~~~~~~~I~~~~~~~~~~s~~~i~~~l~~~~~~~~~~~~S~sTV~r~L~~~~~~ 138 (159)
T 2k27_A 81 PKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQ 138 (159)
T ss_dssp CCCCCTTHHHHHHHHHHHCSSSCHHHHHHHHHHHTCSCTTTSCCHHHHHHHHHHHSCC
T ss_pred CCCCCHHHHHHHHHHHHHCccchHHHHHHHHHHhcccccCCccCHHHHHHHHHHHhCC
Confidence 34677888888888765 56899999999976642 5678889999998887754
No 87
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=20.71 E-value=79 Score=25.33 Aligned_cols=27 Identities=26% Similarity=0.422 Sum_probs=11.8
Q ss_pred CCCHHHHHHHHHHHHHhcCcEEEEecc
Q 004768 38 FVDREELIQHVGDFAVSQGYVVTIKQS 64 (732)
Q Consensus 38 F~s~e~~~~~~~~~A~~~Gf~i~~~~s 64 (732)
|.+-||-..-++..-+++||.+++-+|
T Consensus 8 fstdeetlrkfkdiikkngfkvrtvrs 34 (134)
T 2l69_A 8 FSTDEETLRKFKDIIKKNGFKVRTVRS 34 (134)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECS
T ss_pred EeCCHHHHHHHHHHHHhcCceEEEecC
Confidence 344444444444444444444444443
No 88
>1irz_A ARR10-B; helix-turn-helix, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.11
Probab=20.49 E-value=1.7e+02 Score=21.91 Aligned_cols=45 Identities=20% Similarity=0.270 Sum_probs=31.5
Q ss_pred cccHH-HHHHHHHHHHcC---CChHHHHHHHHhhCCCcccChhhHhHHHHHHh
Q 004768 145 RFTER-EVLLIKEMTEAG---LKPRQILKRLRQSNPELLSTPKHVYNVKAKLR 193 (732)
Q Consensus 145 ~~~~~-~~~~i~~l~~~g---~~~~~I~~~l~~~~~~~~~t~kDi~N~~~~~r 193 (732)
++++| +...+..+...| ..|+.|++.|.. + .+|...|.-..+|.|
T Consensus 9 ~WT~elH~~Fv~Av~~LG~~~AtPk~Il~~M~v--~--gLT~~~VkSHLQKYR 57 (64)
T 1irz_A 9 LWTHELHNKFLAAVDHLGVERAVPKKILDLMNV--D--KLTRENVASHLQKFR 57 (64)
T ss_dssp SSCHHHHHHHHHHHHHHCTTTCCHHHHHHHHCC--T--TCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCcHHHHHHcCC--C--CCCHHHHHHHHHHHH
Confidence 56766 445555555555 458999998864 2 489999988888866
No 89
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=20.32 E-value=99 Score=23.63 Aligned_cols=37 Identities=19% Similarity=0.329 Sum_probs=28.5
Q ss_pred hcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC
Q 004768 393 TCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT 433 (732)
Q Consensus 393 aaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~ 433 (732)
.++|-+|+|..| ..+..++.++.+.++|+ ++..+-|+
T Consensus 11 ~~~n~vVikT~p---G~A~~va~~iD~~~~~e-I~GTIAGD 47 (71)
T 1b4b_A 11 GTGNLLVLRTLP---GNAHAIGVLLDNLDWDE-IVGTICGD 47 (71)
T ss_dssp EETTEEEEEEST---TCHHHHHHHHHHHCCTT-EEEEEECS
T ss_pred ecCCEEEEEeCC---CcHHHHHHHHHhCCCCC-eEEEEeeC
Confidence 369999999875 44677888888887776 77777663
Done!