Your job contains 1 sequence.
>004770
MSSIEFLRSTIHNRFLYANSSYNLHGGSFCHSRCRVYYHNTYRFASHAILFPSVIISNSQ
QKLSLKRGLLYSNQNLREIKILASSKDGESSETSESDGQSQSQTQSPTSTDSPTSQRREK
RNKSNGFWWSKGKKFKWQPIIQAQEIGVLLLQLGIVMFVMRLLRPGIPLPGSEPRTSTTF
VSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPT
KRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPV
SFSQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRL
GARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARA
KKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNR
SDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFT
GADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAG
HAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGG
RAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGV
PWGRDQVLCFC
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004770
(731 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 2461 2.6e-261 2
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 2427 8.0e-258 2
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 998 2.2e-105 2
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 982 1.8e-101 2
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 982 1.8e-101 2
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 975 4.6e-101 2
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 958 2.6e-98 2
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 933 1.3e-96 2
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 903 9.9e-95 2
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 903 9.9e-95 2
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 918 1.6e-94 2
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 907 3.4e-94 2
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 932 1.3e-93 1
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 904 1.0e-92 2
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 923 1.1e-92 1
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 887 1.6e-92 2
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 919 3.0e-92 1
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 917 5.0e-92 1
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 917 5.0e-92 1
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 881 8.9e-92 2
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 881 8.9e-92 2
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 887 1.0e-90 2
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 897 6.5e-90 1
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 894 1.4e-89 1
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 894 1.4e-89 1
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 893 1.7e-89 1
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 841 1.9e-89 2
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 892 2.2e-89 1
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 892 2.2e-89 1
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 889 4.6e-89 1
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 886 9.6e-89 1
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 884 1.6e-88 1
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 883 2.0e-88 1
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 876 1.1e-87 1
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 876 1.1e-87 1
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 876 1.1e-87 1
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 871 3.7e-87 1
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 871 3.7e-87 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 871 3.7e-87 1
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 868 7.7e-87 1
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 868 7.7e-87 1
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 863 2.6e-86 1
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 861 4.3e-86 1
WB|WBGene00004978 - symbol:spg-7 species:6239 "Caenorhabd... 854 2.4e-85 1
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 852 3.8e-85 1
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 846 1.7e-84 1
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 845 2.1e-84 1
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 837 1.5e-83 1
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 835 2.4e-83 1
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 816 2.5e-83 2
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 825 2.8e-82 1
MGI|MGI:2385906 - symbol:Spg7 "spastic paraplegia 7 homol... 818 1.5e-81 1
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 818 1.5e-81 1
UNIPROTKB|A7E2Z6 - symbol:SPG7 "SPG7 protein" species:991... 807 2.2e-80 1
UNIPROTKB|E2R4F3 - symbol:SPG7 "Uncharacterized protein" ... 800 1.2e-79 1
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 796 3.3e-79 1
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 793 6.8e-79 1
ZFIN|ZDB-GENE-030131-5391 - symbol:spg7 "spastic parapleg... 792 8.7e-79 1
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 789 1.8e-78 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 786 3.8e-78 1
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 786 3.8e-78 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 786 3.8e-78 1
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 777 3.4e-77 1
RGD|727940 - symbol:Spg7 "spastic paraplegia 7 homolog (h... 551 4.1e-77 2
UNIPROTKB|Q7TT47 - symbol:Spg7 "Paraplegin" species:10116... 551 4.1e-77 2
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 770 1.9e-76 1
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 751 1.9e-74 1
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 747 5.1e-74 1
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 711 5.3e-73 2
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 737 5.9e-73 1
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 733 1.6e-72 1
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 698 6.0e-72 2
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 725 1.1e-71 1
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 702 1.2e-71 2
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 702 1.2e-71 2
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 697 4.2e-71 2
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 698 5.3e-71 2
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 718 6.1e-71 1
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 717 7.7e-71 1
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 717 7.7e-71 1
TAIR|locus:2138146 - symbol:FtsHi1 "FTSH inactive proteas... 697 1.1e-70 2
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 690 2.9e-70 2
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 707 8.9e-70 1
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 704 1.8e-69 1
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 698 8.0e-69 1
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 698 8.0e-69 1
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 682 4.0e-67 1
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 680 6.5e-67 1
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 669 9.4e-66 1
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 632 2.9e-64 2
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 644 4.2e-63 1
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 639 1.4e-62 1
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 632 7.9e-62 1
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 632 7.9e-62 1
TIGR_CMR|CPS_1798 - symbol:CPS_1798 "ATP-dependent peptid... 575 1.3e-54 1
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 538 9.5e-54 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 548 6.3e-53 1
TIGR_CMR|CPS_1795 - symbol:CPS_1795 "ATP-dependent peptid... 549 8.2e-52 1
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 498 1.2e-47 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 502 1.7e-47 1
WARNING: Descriptions of 626 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 2461 (871.4 bits), Expect = 2.6e-261, Sum P(2) = 2.6e-261
Identities = 488/594 (82%), Positives = 538/594 (90%)
Query: 138 QPIIQAQEIGVLLLQLGIVMFVMRLLRPGIPLPGSEPRTSTTFVSVPYSDFLSKINSNQV 197
+PIIQAQEIGV+LLQLGIVMFV+RLLRPGIPLPGSEPRT TTF+SVPYSDFLSK+N+++V
Sbjct: 131 KPIIQAQEIGVMLLQLGIVMFVVRLLRPGIPLPGSEPRTQTTFMSVPYSDFLSKVNNDEV 190
Query: 198 AKVEVDGVHIMFKLKNDGSIQESEVITN--KFQES-ESLLKSVTPTKRIVYTTTRPSDIK 254
KVEVDG H++FKLK+DG++QESE ++ K ES E++L+SV PTKR+VY+TTRP DIK
Sbjct: 191 QKVEVDGFHVLFKLKDDGNLQESETSSSSIKLSESSETMLRSVAPTKRVVYSTTRPRDIK 250
Query: 255 TPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQ-TAGQVGHRK 313
TPYEKMLEN VEFGSPDKRSGGF NS LI LFY+AVLAGLLHRFPV+FSQ T GQ+ RK
Sbjct: 251 TPYEKMLENNVEFGSPDKRSGGFFNSGLIVLFYIAVLAGLLHRFPVNFSQSTTGQLRTRK 310
Query: 314 TRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGL 373
+ GPGG KVS G+TITFADVAGVDEAKEELEEIVEFL++PD+Y+RLGARPPRGVLLVGL
Sbjct: 311 SGGPGGGKVSGDGETITFADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGL 370
Query: 374 PGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEI 433
PGTGKTLLAKAVAGE++VPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEI
Sbjct: 371 PGTGKTLLAKAVAGESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEI 430
Query: 434 DAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGR 493
DAVAKSRDG+FR+VSNDEREQTLNQLLTEMDGFDS+SAVIVLGATNR+DVLDPALRRPGR
Sbjct: 431 DAVAKSRDGKFRMVSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGR 490
Query: 494 FDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXX 553
FDRVV VE+PDK+GRE+ILKVHVSKKELPL D++L IASMTTGFTG
Sbjct: 491 FDRVVTVESPDKVGRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAAL 550
Query: 554 XXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLP 613
GR +K+ V+KIDFIHAVERSIAGIEKKTA+LKGSEKAVVARHEAGHAVVGTAVASLL
Sbjct: 551 LAGRKSKMTVDKIDFIHAVERSIAGIEKKTARLKGSEKAVVARHEAGHAVVGTAVASLLS 610
Query: 614 GQPRVEKLSILPRTGGALGFTYTP-ANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRI 672
GQ RVEKLSILPR+GGALGFTY P +EDRYLLFIDEL GRLVTLLGGRAAEEV YSGRI
Sbjct: 611 GQSRVEKLSILPRSGGALGFTYIPPTHEDRYLLFIDELHGRLVTLLGGRAAEEVVYSGRI 670
Query: 673 STGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQ 726
STGALDDIRRATDMAYKA+AEYGLN IGPVS+ATLS+GGID+SGG PWGRDQ
Sbjct: 671 STGALDDIRRATDMAYKAVAEYGLNEKIGPVSVATLSAGGIDDSGGS-PWGRDQ 723
Score = 77 (32.2 bits), Expect = 2.6e-261, Sum P(2) = 2.6e-261
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 1 MSSIEFLRSTIHNRFLYA-----NSSYNLHGGSFCHSRCRVYYHNTYRFASHA-ILFP-S 53
M+SIE L IH++F ++ +S LH SF R + N RF S++ I P S
Sbjct: 1 MTSIELLSPLIHDKFRFSTCCSTSSLLYLHASSFFRDRSFGFRQNPNRFVSNSSIQLPQS 60
Query: 54 VIISNSQQKLSLKRG 68
V S +Q++ +L +G
Sbjct: 61 VPGSINQERFNLWQG 75
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 2427 (859.4 bits), Expect = 8.0e-258, Sum P(2) = 8.0e-258
Identities = 489/591 (82%), Positives = 527/591 (89%)
Query: 138 QPIIQAQEIGVLLLQLGIVMFVMRLLRPGIPLPGSEPRTSTTFVSVPYSDFLSKINSNQV 197
QPIIQAQ IGVLLLQL +VMFVMRLLRPGIPLPGSEPR TTFVSVPYS+FLSK+NSNQV
Sbjct: 132 QPIIQAQGIGVLLLQLSVVMFVMRLLRPGIPLPGSEPRIQTTFVSVPYSEFLSKVNSNQV 191
Query: 198 AKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPY 257
KVEVDGV ++FKL++DG QESE + Q SESLL++V PTKR+VY+TTRP DIKTPY
Sbjct: 192 QKVEVDGVQVLFKLRDDGKWQESET-SRLSQSSESLLRTVAPTKRVVYSTTRPGDIKTPY 250
Query: 258 EKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTA-GQVGHRKTRG 316
EKML N VEFGSP+KRSGGF NSALIALFY+AVLAGL+ RFPVSFS ++ GQ+ RK G
Sbjct: 251 EKMLGNNVEFGSPEKRSGGFFNSALIALFYIAVLAGLI-RFPVSFSTSSTGQLRTRKAGG 309
Query: 317 PGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGT 376
P G KVS G+TITFADVAGVDEAKEELEEIVEFLR+P+KY+RLGARPPRGVLLVGLPGT
Sbjct: 310 PDGGKVSGGGETITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGT 369
Query: 377 GKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAV 436
GKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAV
Sbjct: 370 GKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAV 429
Query: 437 AKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDR 496
AKSRDG+FR+ SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNR+DVLDPALRRPGRFDR
Sbjct: 430 AKSRDGKFRMGSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDR 489
Query: 497 VVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXG 556
VV VETPDKIGRE+IL+VHVSKKELPL D++LG IASMTTGFTG G
Sbjct: 490 VVTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAG 549
Query: 557 RLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQP 616
R NK VEKIDFI AVERSIAGIEKK+A+LKG+EKAVVARHEAGHAVVGTAVA+LL GQP
Sbjct: 550 RKNKTNVEKIDFIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQP 609
Query: 617 RVEKLSILPRTGGALGFTYTP-ANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTG 675
RVEKLSILPRTGGALGFTY P +EDRYLLFIDEL GRLVTLLGGRAAEEV YSGRISTG
Sbjct: 610 RVEKLSILPRTGGALGFTYIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSGRISTG 669
Query: 676 ALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQ 726
A DDIRRATDMAYKA+AEYGLN+ IGPVS+ATLS GGID+SGG PWGRDQ
Sbjct: 670 AFDDIRRATDMAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGS-PWGRDQ 719
Score = 78 (32.5 bits), Expect = 8.0e-258, Sum P(2) = 8.0e-258
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 2 SSIEFLRSTIHNRFLYANSSYNLHGGS--FCHSRCRVYYHNTYRFASHAILFP 52
++ EFL+ IH +S+ L+ + F + RCRVY N RF S++I P
Sbjct: 3 TTFEFLQPRIHGFATCCSSNSLLYSKASRFFNDRCRVYRQNPNRFVSNSITLP 55
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 998 (356.4 bits), Expect = 2.2e-105, Sum P(2) = 2.2e-105
Identities = 227/462 (49%), Positives = 296/462 (64%)
Query: 245 YTTTRPSDIKTPYEKMLENQVEFGS-PDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFS 303
+ + +P+D EK+LE ++ + P++ + S I+ F + L G+ F
Sbjct: 69 FRSYKPTDAMLS-EKLLEKKINVSAKPEEEKVSWF-SIFISWFPLLFLVGVWIFF---MR 123
Query: 304 QTAGQVGHRKTRGPGGAKV-SEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGA 362
Q G G G AK+ +E +TF DVAGVDEAKEELEEI++FL+ P K+ +LG
Sbjct: 124 QMQGGGGKAMAFGKSRAKLLTEAQGRVTFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGG 183
Query: 363 RPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKK 422
R P+GVLLVG PGTGKTLLA+AVAGEA VPF S S S+FVE++VG+GASRVRDLF + KK
Sbjct: 184 RIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKK 243
Query: 423 EAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSD 482
AP IIFIDEIDAV + R G +DEREQTLNQLL EMDGF+SN VI++ ATNR D
Sbjct: 244 NAPCIIFIDEIDAVGRHR-GAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPD 302
Query: 483 VLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGX 542
VLDPAL RPGRFDR V+V PD GRE ILKVH K+ PLA D+DLG IA T GF+G
Sbjct: 303 VLDPALLRPGRFDRQVVVPQPDVKGREMILKVHT--KKTPLASDVDLGVIARGTPGFSGA 360
Query: 543 XXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHA 602
R +K VE DF A ++ + G+E+++ + EK A HEAGH
Sbjct: 361 DLSNVVNEAALLAARKDKSFVEMKDFDDAKDKVLMGVERRSMVISEEEKKNTAYHEAGH- 419
Query: 603 VVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRA 662
T VA L+PG V K+SI+PR G ALG T ED++ + L R+ L+GGRA
Sbjct: 420 ---TLVAKLIPGTDPVHKVSIIPR-GRALGVTMQLPIEDKHSYNKESLLNRIAVLMGGRA 475
Query: 663 AEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVS 704
AEE+ ++ ++TGA +DI RAT++A K + E+G++ +GPV+
Sbjct: 476 AEEIIFN-ELTTGAGNDIERATEIARKMVCEWGMSEKMGPVT 516
Score = 65 (27.9 bits), Expect = 2.2e-105, Sum P(2) = 2.2e-105
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 151 LQLGIVMFVMRLLRPGIPLPGSEPRTSTTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFK 210
L L +V+ +M +L + ++PRT T + YSDF++ +++ +V+ V V G I+ K
Sbjct: 8 LALWLVISLMMILLFNL---FNKPRT--TQERLGYSDFIAAVDAGKVSTVTVQGNEIIGK 62
Query: 211 LKNDGSIQESEVITNKFQESESLLK 235
+DG S T+ SE LL+
Sbjct: 63 Y-SDGKEFRSYKPTDAML-SEKLLE 85
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 982 (350.7 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 232/499 (46%), Positives = 304/499 (60%)
Query: 209 FKLKNDGSIQESEVITNK-FQESESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEF 267
+ L G + + T++ E +L+ T K T P + Y+ + + V
Sbjct: 41 YSLLEKGQVASVAIQTDRTINEISGVLRDGTRFK-----TRGPLEDAELYKDLKKMNVTV 95
Query: 268 GSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHR-KTRGPGGAKV-SEQ 325
+ F + L +L V ++ GL F F Q A G+R + G AK+ +++
Sbjct: 96 EIMPPKEPAFWANLLSSLLPVLLMVGLFF-F---FMQQAQGGGNRVMSFGKSRAKLHTDE 151
Query: 326 GDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAV 385
+TFADVAG+DE KEEL EIVEFL++P KY LGAR P+GVLL G PGTGKTLLA+A+
Sbjct: 152 KKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAI 211
Query: 386 AGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFR 445
AGEA VPF S S S+FVE++VG+GASRVRDLF +AKK AP I+FIDEIDAV + R G
Sbjct: 212 AGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQR-GAGL 270
Query: 446 IVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDK 505
+DEREQTLNQLL EMDGF+SN +I++ ATNR D+LDPAL RPGRFDR ++V+TPD
Sbjct: 271 GGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDI 330
Query: 506 IGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEK 565
GR+ ILKVHV K PL D+DL +A T GFTG R NK V+
Sbjct: 331 NGRKEILKVHVKGK--PLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINM 388
Query: 566 IDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILP 625
+ A+ER IAG EKK+ + EK +VA HEAGHA+VG LLP V K+SI+P
Sbjct: 389 EEMEEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGY----LLPHTDPVHKISIIP 444
Query: 626 RTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATD 685
R G A G+T EDR + +L + LLGGR AE + ISTGA +D+ RAT+
Sbjct: 445 R-GRAGGYTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVLED-ISTGARNDLERATE 502
Query: 686 MAYKAIAEYGLNRTIGPVS 704
A + + EYG++ +GP++
Sbjct: 503 TARRMVMEYGMSEELGPLT 521
Score = 44 (20.5 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 172 SEPRTSTTFVSVPYSDFLSKINSNQVAKVEV 202
S P ++T+ + Y +F S + QVA V +
Sbjct: 25 SRP-SATSIRDLKYDEFYSLLEKGQVASVAI 54
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 982 (350.7 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 232/499 (46%), Positives = 304/499 (60%)
Query: 209 FKLKNDGSIQESEVITNK-FQESESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEF 267
+ L G + + T++ E +L+ T K T P + Y+ + + V
Sbjct: 41 YSLLEKGQVASVAIQTDRTINEISGVLRDGTRFK-----TRGPLEDAELYKDLKKMNVTV 95
Query: 268 GSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHR-KTRGPGGAKV-SEQ 325
+ F + L +L V ++ GL F F Q A G+R + G AK+ +++
Sbjct: 96 EIMPPKEPAFWANLLSSLLPVLLMVGLFF-F---FMQQAQGGGNRVMSFGKSRAKLHTDE 151
Query: 326 GDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAV 385
+TFADVAG+DE KEEL EIVEFL++P KY LGAR P+GVLL G PGTGKTLLA+A+
Sbjct: 152 KKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAI 211
Query: 386 AGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFR 445
AGEA VPF S S S+FVE++VG+GASRVRDLF +AKK AP I+FIDEIDAV + R G
Sbjct: 212 AGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQR-GAGL 270
Query: 446 IVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDK 505
+DEREQTLNQLL EMDGF+SN +I++ ATNR D+LDPAL RPGRFDR ++V+TPD
Sbjct: 271 GGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDI 330
Query: 506 IGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEK 565
GR+ ILKVHV K PL D+DL +A T GFTG R NK V+
Sbjct: 331 NGRKEILKVHVKGK--PLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINM 388
Query: 566 IDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILP 625
+ A+ER IAG EKK+ + EK +VA HEAGHA+VG LLP V K+SI+P
Sbjct: 389 EEMEEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGY----LLPHTDPVHKISIIP 444
Query: 626 RTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATD 685
R G A G+T EDR + +L + LLGGR AE + ISTGA +D+ RAT+
Sbjct: 445 R-GRAGGYTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVLED-ISTGARNDLERATE 502
Query: 686 MAYKAIAEYGLNRTIGPVS 704
A + + EYG++ +GP++
Sbjct: 503 TARRMVMEYGMSEELGPLT 521
Score = 44 (20.5 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 172 SEPRTSTTFVSVPYSDFLSKINSNQVAKVEV 202
S P ++T+ + Y +F S + QVA V +
Sbjct: 25 SRP-SATSIRDLKYDEFYSLLEKGQVASVAI 54
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 975 (348.3 bits), Expect = 4.6e-101, Sum P(2) = 4.6e-101
Identities = 224/496 (45%), Positives = 316/496 (63%)
Query: 225 NKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQ-VEFGSPDKRSGGFLNSALI 283
N+ ++ +K+++ + VYT + +D + +L+++ + +G+ + + F +
Sbjct: 75 NQVSIGQTTIKAISSSHNTVYTAKKVNDPELV--SLLDSKNIAYGAYSE-TNWFTDILFS 131
Query: 284 ALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAK--VSEQGDTITFADVAGVDEAK 341
+ V + G+ F S Q +G G G +K V+ + + F+DVAGV+EAK
Sbjct: 132 WVLPVFIFFGIW-MFLASRMQK--NMGS-SILGIGSSKKLVNSEKPKVKFSDVAGVEEAK 187
Query: 342 EELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEF 401
EE++EIV+FL+ P++YI+LGA+ P+G+LLVG PGTGKTLLAKAVAGEA+VPF S S S F
Sbjct: 188 EEVKEIVDFLKYPERYIKLGAKIPKGLLLVGPPGTGKTLLAKAVAGEADVPFFSVSGSSF 247
Query: 402 VELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLT 461
+E++VG+GASRVRDLF AKKEAP+I+FIDEIDA+ KSR + NDEREQTLNQLL
Sbjct: 248 IEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIGKSRAASGMMGGNDEREQTLNQLLA 307
Query: 462 EMDGFDSNSA-VIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKE 520
EMDGF + S+ VIVL ATNR +VLD AL RPGRFDR V+V+ PD GR ILKVH+ K+
Sbjct: 308 EMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDRQVLVDKPDFKGRCDILKVHM--KD 365
Query: 521 LPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIE 580
+ ++ + + DIA +T G G GR +K VE+ D + AVER+IAG+E
Sbjct: 366 VKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRDSKKYVEQNDLVEAVERAIAGLE 425
Query: 581 KKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANE 640
KK+ ++ EK +V HE GHA++ A G RV K+S++PR ALG+T E
Sbjct: 426 KKSRRINEKEKKIVTYHECGHALI----AETTKGAKRVSKVSVIPRGLAALGYTLNTPEE 481
Query: 641 DRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTI 700
+++L+ EL + LLGGRAAEEV + G ISTGA +D+ RATD+ I+ YG++
Sbjct: 482 NKFLMQKHELIAEVDVLLGGRAAEEV-FIGEISTGASNDLERATDIIKAMISMYGMSEIA 540
Query: 701 GPVSIA----TLSSGG 712
G + + T SGG
Sbjct: 541 GLMVLEKQRNTFLSGG 556
Score = 47 (21.6 bits), Expect = 4.6e-101, Sum P(2) = 4.6e-101
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 182 SVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPTK 241
+VPYS+ I S Q+ +V + I K S + K + E L S+ +K
Sbjct: 59 NVPYSELKKLIESGQINQVSIGQTTI----KAISSSHNTVYTAKKVNDPE--LVSLLDSK 112
Query: 242 RIVY 245
I Y
Sbjct: 113 NIAY 116
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 958 (342.3 bits), Expect = 2.6e-98, Sum P(2) = 2.6e-98
Identities = 224/491 (45%), Positives = 302/491 (61%)
Query: 220 SEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLE-NQVE-FGSPDKR---- 273
S++IT + + + ++ I TTT + + T E + +E D +
Sbjct: 43 SQIIT--LSQEHKIAEITVDSENIEVTTTDGTKLSTVKEYIASIYDIEGLDLTDVKVNIQ 100
Query: 274 -SGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGD-TITF 331
+GG +I + ++ G L F F+Q G + G AK+ TITF
Sbjct: 101 PAGGLDWGTMILTYLPFLIFGGLLIF--IFTQARGANNQAVSFGRSKAKLFNMDKPTITF 158
Query: 332 ADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEV 391
A+VAGVDEAK+E+ E+VEFL+S +K+ LGAR P+G+LL+G PGTGKTLLAKA+AGEA V
Sbjct: 159 ANVAGVDEAKQEVGEVVEFLKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAGEAGV 218
Query: 392 PFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDE 451
PF S S SEFVE++VG+GASRVRDLF +AKK AP IIFIDEIDAV + R G +DE
Sbjct: 219 PFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQR-GAGLGGGHDE 277
Query: 452 REQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAI 511
REQTLNQ+L EMDGFD++++VIV+ ATNR D+LDPAL RPGRFDR V+++ PD GREAI
Sbjct: 278 REQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDITGREAI 337
Query: 512 LKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHA 571
LK+H K PLA ++L ++A T GF+G R N+ VVE D +
Sbjct: 338 LKIHAKGK--PLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKVVETEDLEES 395
Query: 572 VERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGAL 631
++R IAG E+K+ ++ EK V A HE GH +V L+ G V K+SI+ R G L
Sbjct: 396 IDRVIAGPERKSRRISTQEKEVTAYHETGHGLV----LRLVQGADPVHKISIVAR-GMTL 450
Query: 632 GFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAI 691
G T NEDRYL+ + + LL G AEE+ + +STGA DD+RRATD+A+K +
Sbjct: 451 GHTRQLPNEDRYLMTRSQFKAMMAGLLAGYVAEELTFK-ELSTGASDDLRRATDIAHKMV 509
Query: 692 AEYGLNRTIGP 702
YG++ +GP
Sbjct: 510 TSYGMSDKLGP 520
Score = 38 (18.4 bits), Expect = 2.6e-98, Sum P(2) = 2.6e-98
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 183 VPYSDFLSKINSNQVAKVEVDGVHI 207
VP S ++ +++A++ VD +I
Sbjct: 40 VPLSQIITLSQEHKIAEITVDSENI 64
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 933 (333.5 bits), Expect = 1.3e-96, Sum P(2) = 1.3e-96
Identities = 219/475 (46%), Positives = 295/475 (62%)
Query: 234 LKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEF-GSPDKRSGGFLNSALIAL-FYVAVL 291
+K VT + +TT P + + +++ V G P K+ FL+ + L F + +
Sbjct: 59 IKGVTKDNKH-FTTYLPMEDQALLNQLMAKGVSVKGEPPKQQSMFLHILISWLPFLILIF 117
Query: 292 AGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDT-ITFADVAGVDEAKEELEEIVEF 350
+L + Q G+ G + G A++ Q +TF DVAGVDEAKEE++E+VEF
Sbjct: 118 VWILFMRQM---QGGGRGGGPMSFGRSKARLLSQDQVKVTFDDVAGVDEAKEEVKELVEF 174
Query: 351 LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGA 410
LR P K+ RLG + P GVLLVG PGTGKTLLAKAVAGEA+VPF + S S+FVE++VG+GA
Sbjct: 175 LRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGA 234
Query: 411 SRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNS 470
SRVRD+F +AKK+AP IIFIDEIDAV + R G +DEREQTLNQLL EMDGF+
Sbjct: 235 SRVRDMFDQAKKQAPCIIFIDEIDAVGRHR-GAGLGGGHDEREQTLNQLLVEMDGFEGKE 293
Query: 471 AVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLG 530
+IV+ ATNR DVLDPAL RPGRFDR V+V PD GRE ILKVH++K LPLAKD+
Sbjct: 294 GIIVMAATNRPDVLDPALLRPGRFDRQVVVPLPDIKGREYILKVHMNK--LPLAKDVKAS 351
Query: 531 DIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSE 590
IA T GF+G R NK V +F A ++ + G E+++ + E
Sbjct: 352 VIARGTPGFSGADLANIVNEAALFAARENKKDVSMSEFERAKDKIMMGAERRSMVMSDDE 411
Query: 591 KAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDEL 650
K + A HEAGHA+VG +L P V K++I+PR G ALG T DRY + L
Sbjct: 412 KKLTAYHEAGHAIVGL---HMLEHDP-VYKVTIIPR-GRALGVTMFLPEHDRYSMTKRRL 466
Query: 651 CGRLVTLLGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVS 704
+L L GGR AEE+ + ++TGA +DI +AT++A + ++GL++ +GP++
Sbjct: 467 ECQLAGLFGGRIAEEIIFGPDLVTTGASNDIEKATEIARNMVTKWGLSQKLGPLT 521
Score = 47 (21.6 bits), Expect = 1.3e-96, Sum P(2) = 1.3e-96
Identities = 13/66 (19%), Positives = 30/66 (45%)
Query: 185 YSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSI-----QESEVITNKFQESESLLKSVTP 239
YS F+ +N+++V+ V + G I K++ E + + N+ +K P
Sbjct: 37 YSQFVQAVNNDKVSSVVIQGHEIKGVTKDNKHFTTYLPMEDQALLNQLMAKGVSVKGEPP 96
Query: 240 TKRIVY 245
++ ++
Sbjct: 97 KQQSMF 102
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 903 (322.9 bits), Expect = 9.9e-95, Sum P(2) = 9.9e-95
Identities = 212/476 (44%), Positives = 283/476 (59%)
Query: 245 YTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQ 304
+ T +P D + +++ + + ++ GF S +I L +L G+ F ++ Q
Sbjct: 72 FVTIKPGDAEVT-TLLIDKNIPVRAEKQQQSGF-QSFIITLLPFLLLIGVWVYF-MNRMQ 128
Query: 305 TAGQVGHRKTRGPGGAKV-SEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGAR 363
G+ G G AK+ +E+ +TF DVAG+DEAKEELEEIVEFLR+P K+ RLG +
Sbjct: 129 GGGR-GGAMGFGKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGK 187
Query: 364 PPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKE 423
P+G LLVG PGTGKTLLA+A+AGEA VPF + S S+FVE++VG+GASRVRD+F +AKK
Sbjct: 188 IPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKN 247
Query: 424 APSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDV 483
AP I+FIDEIDAV + R + NDEREQTLNQLL EMDGF++N VI+L ATNR DV
Sbjct: 248 APCIVFIDEIDAVGRHRGAGYG-GGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDV 306
Query: 484 LDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXX 543
LDPAL RPGRFDR V V PD GRE IL VH K PL D+DL IA T GF+G
Sbjct: 307 LDPALLRPGRFDRNVTVGNPDIKGREKILGVHARKT--PLGPDVDLRIIARGTPGFSGAD 364
Query: 544 XXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAV 603
R+ + V DF +A ++ + G E+++ L +K A HEAGHAV
Sbjct: 365 LANLVNEAALMAARVGRRFVTMEDFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAV 424
Query: 604 VGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAA 663
VG A LP V K +I+PR GGALG + DR DE +L + G+AA
Sbjct: 425 VGLA----LPMCDPVYKATIIPR-GGALGMVVSLPEMDRLNWHRDECQQKLAMTMAGKAA 479
Query: 664 EEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGG 718
E + Y +S G DI++A+ +A + +G++ +G + A G + G
Sbjct: 480 EILKYGEDHVSNGPAGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAG 535
Score = 59 (25.8 bits), Expect = 9.9e-95, Sum P(2) = 9.9e-95
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 185 YSDFLSKINSNQVAKVEVDGVHIMFKLKNDG 215
YS+F+S ++ V KV +DG I ++ +DG
Sbjct: 40 YSEFVSAVDEGNVTKVILDGEQIRYRT-SDG 69
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 903 (322.9 bits), Expect = 9.9e-95, Sum P(2) = 9.9e-95
Identities = 212/476 (44%), Positives = 283/476 (59%)
Query: 245 YTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQ 304
+ T +P D + +++ + + ++ GF S +I L +L G+ F ++ Q
Sbjct: 72 FVTIKPGDAEVT-TLLIDKNIPVRAEKQQQSGF-QSFIITLLPFLLLIGVWVYF-MNRMQ 128
Query: 305 TAGQVGHRKTRGPGGAKV-SEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGAR 363
G+ G G AK+ +E+ +TF DVAG+DEAKEELEEIVEFLR+P K+ RLG +
Sbjct: 129 GGGR-GGAMGFGKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGK 187
Query: 364 PPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKE 423
P+G LLVG PGTGKTLLA+A+AGEA VPF + S S+FVE++VG+GASRVRD+F +AKK
Sbjct: 188 IPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKN 247
Query: 424 APSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDV 483
AP I+FIDEIDAV + R + NDEREQTLNQLL EMDGF++N VI+L ATNR DV
Sbjct: 248 APCIVFIDEIDAVGRHRGAGYG-GGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDV 306
Query: 484 LDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXX 543
LDPAL RPGRFDR V V PD GRE IL VH K PL D+DL IA T GF+G
Sbjct: 307 LDPALLRPGRFDRNVTVGNPDIKGREKILGVHARKT--PLGPDVDLRIIARGTPGFSGAD 364
Query: 544 XXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAV 603
R+ + V DF +A ++ + G E+++ L +K A HEAGHAV
Sbjct: 365 LANLVNEAALMAARVGRRFVTMEDFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAV 424
Query: 604 VGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAA 663
VG A LP V K +I+PR GGALG + DR DE +L + G+AA
Sbjct: 425 VGLA----LPMCDPVYKATIIPR-GGALGMVVSLPEMDRLNWHRDECQQKLAMTMAGKAA 479
Query: 664 EEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGG 718
E + Y +S G DI++A+ +A + +G++ +G + A G + G
Sbjct: 480 EILKYGEDHVSNGPAGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAG 535
Score = 59 (25.8 bits), Expect = 9.9e-95, Sum P(2) = 9.9e-95
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 185 YSDFLSKINSNQVAKVEVDGVHIMFKLKNDG 215
YS+F+S ++ V KV +DG I ++ +DG
Sbjct: 40 YSEFVSAVDEGNVTKVILDGEQIRYRT-SDG 69
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 918 (328.2 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
Identities = 224/505 (44%), Positives = 296/505 (58%)
Query: 216 SIQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSG 275
++++ +V KF + S+L+ R T P+D + + N V+ + G
Sbjct: 132 AVKKGKVERVKFSKDGSVLQLTAVDNRRA-TVIVPNDPDL-IDILAMNGVDISVSEGEGG 189
Query: 276 -GFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQ--VGHRKTRGPGGAKVSEQGDT-ITF 331
G + LF + GL + F G +G G +K E +T +TF
Sbjct: 190 NGLFDFIGNLLFPLLAFGGLFYLFRGGQGGAGGPGGLGGPMDFGRSKSKFQEVPETGVTF 249
Query: 332 ADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEV 391
DVAG D+AK EL+E+V+FL++PDKY LGA+ P+G LLVG PGTGKTLLA+AVAGEA V
Sbjct: 250 GDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGV 309
Query: 392 PFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDE 451
PF SC+ASEFVEL+VG+GASRVRDLF +AK +AP I+FIDEIDAV + R G NDE
Sbjct: 310 PFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQR-GAGMGGGNDE 368
Query: 452 REQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAI 511
REQT+NQLLTEMDGF NS VIVL ATNR DVLD AL RPGRFDR V V+ PD GR I
Sbjct: 369 REQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQI 428
Query: 512 LKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHA 571
LKVH K + KD+D +A T GFTG R + K + A
Sbjct: 429 LKVHSRGKAI--GKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDA 486
Query: 572 VERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGAL 631
+ER IAG EKK A + +K +VA HEAGHA+VG +L+P V K+SI+PR G A
Sbjct: 487 LERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVG----ALMPEYDPVAKISIIPR-GQAG 541
Query: 632 GFTYTPANEDRY---LLFIDELCGRLVTLLGGRAAEEVAYSGR-ISTGALDDIRRATDMA 687
G T+ +E+R L L ++ LGGR AEEV + ++TGA +D + + +A
Sbjct: 542 GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVA 601
Query: 688 YKAIAEYGLNRTIGPVSIATLSSGG 712
+ + +G ++ IG V++ +GG
Sbjct: 602 RQMVERFGFSKKIGQVAVG--GAGG 624
Score = 42 (19.8 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 185 YSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNK 226
YS+FL+ + +V +V K DGS+ + + N+
Sbjct: 126 YSEFLNAVKKGKVERV---------KFSKDGSVLQLTAVDNR 158
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 907 (324.3 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
Identities = 214/500 (42%), Positives = 303/500 (60%)
Query: 211 LKNDGSIQESEVITNKFQESESLLKSVTP--TKRIVYTTTRPSDIKTPYEKMLENQVEFG 268
L G +Q+ ++ + S +LKS T TK YT P + +N V+F
Sbjct: 46 LVEKGEVQK--IVIEGYDIS-GVLKSGTHFYTKATQYTELIPL--------LRKNNVDFQ 94
Query: 269 SPDKRSG-GFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAK---VSE 324
S G L + LI+ F + +L G+ + F + Q G KT G +K +S+
Sbjct: 95 VASGDSFLGLLFNILISWFPMLLLIGVW----IFFMKQM-QAGGNKTMTFGKSKARLLSD 149
Query: 325 QGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKA 384
+ + +TF DVAG+DEAKEEL EIVEFLR P K+ +LG + P+G LL+G PGTGKTLLAKA
Sbjct: 150 RSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKA 209
Query: 385 VAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRF 444
+AGEA+VPF S S S+FVE++VG+GASRVRD+F + KK AP +IFIDEIDAV + R F
Sbjct: 210 IAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGF 269
Query: 445 RIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPD 504
NDEREQTLNQLL EMDGF++N VI++ ATNR DVLDPAL RPGRFDR + + PD
Sbjct: 270 G-GGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPD 328
Query: 505 KIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVE 564
GR+ IL+VH+ K++P A ++++ IA T GF+G R NK VV
Sbjct: 329 IAGRQKILEVHL--KKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVT 386
Query: 565 KIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSIL 624
DF +A ++ + G+E+K+ ++ EK + A HEAGHA+ + + P + K +I+
Sbjct: 387 NEDFEYARDKILMGMERKSLVMREEEKLLTAYHEAGHAITSLKLEASDP----IHKATII 442
Query: 625 PRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSG-RISTGALDDIRRA 683
PR G ALG DR ++ L+ +GGRAAE+V + + ++GA DI++A
Sbjct: 443 PR-GRALGLVMRLPEHDRVSFTRAKMHADLIVAMGGRAAEQVIFGDDKTTSGAASDIKQA 501
Query: 684 TDMAYKAIAEYGLNRTIGPV 703
T +A + ++G++ +GP+
Sbjct: 502 THLARSMVTKWGMSEKVGPL 521
Score = 50 (22.7 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 183 VPYSDFLSKINSNQVAKVEVDGVHIMFKLKN 213
+ +S+FL + +V K+ ++G I LK+
Sbjct: 38 IQFSEFLDLVEKGEVQKIVIEGYDISGVLKS 68
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
Identities = 208/444 (46%), Positives = 277/444 (62%)
Query: 270 PDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKV-SEQGDT 328
P + + G++ + +V + +L F ++ +Q G G AK+ +E+
Sbjct: 102 PAQETSGWVTFLTTIIPFVIIF--ILFFFLLNQAQGGGS--RVMNFGKSKAKLYTEEKKR 157
Query: 329 ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
+ F DVAG DE K+EL E+VEFL+ P K+ LGAR P+GVLLVG PGTGKTLLAKA AGE
Sbjct: 158 VKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGE 217
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVS 448
A VPF S S S+FVE++VG+GASRVRDLF AKK AP +IFIDEIDAV + R G
Sbjct: 218 AGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQR-GAGLGGG 276
Query: 449 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGR 508
+DEREQTLNQLL EMDGF +N +I++ ATNR+D+LDPAL RPGRFDR + V+ PD IGR
Sbjct: 277 HDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGR 336
Query: 509 EAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDF 568
EA+LKVH K PL + ++L IA T GF+G R NK ++ D
Sbjct: 337 EAVLKVHARNK--PLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDI 394
Query: 569 IHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTG 628
A +R IAG KK+ + E+ +VA HE GH V+G +L V K++I+PR G
Sbjct: 395 DEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGL----VLDEADMVHKVTIVPR-G 449
Query: 629 GALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAY 688
A G+ EDRY EL ++V LLGGR AEE+ + G +STGA +D +RAT++A
Sbjct: 450 QAGGYAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEIIF-GEVSTGAHNDFQRATNIAR 508
Query: 689 KAIAEYGLNRTIGPVSIATLSSGG 712
+ + E+G++ +GP+ S GG
Sbjct: 509 RMVTEFGMSEKLGPLQFGQ-SQGG 531
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 904 (323.3 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 205/404 (50%), Positives = 260/404 (64%)
Query: 307 GQVGHRKTRGPGGAKVSEQGDT-ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPP 365
G +G G +K E +T ++FADVAG D+AK EL+E+V+FL++PDKY LGA+ P
Sbjct: 236 GGLGGPMDFGRSKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIP 295
Query: 366 RGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAP 425
+G LLVG PGTGKTLLA+AVAGEA VPF SC+ASEFVEL+VG+GASRVRDLF +AK +AP
Sbjct: 296 KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAP 355
Query: 426 SIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLD 485
I+FIDEIDAV + R G NDEREQT+NQLLTEMDGF NS VIVL ATNR DVLD
Sbjct: 356 CIVFIDEIDAVGRQR-GAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLD 414
Query: 486 PALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXX 545
AL RPGRFDR V V+ PD GR IL+VH K L KD+D +A T GFTG
Sbjct: 415 SALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKAL--GKDVDFDKVARRTPGFTGADLQ 472
Query: 546 XXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVG 605
R + K + A+ER IAG EKK A + +K +VA HEAGHA+VG
Sbjct: 473 NLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVG 532
Query: 606 TAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRY---LLFIDELCGRLVTLLGGRA 662
+L+P V K+SI+PR G A G T+ +E+R L L ++ LGGR
Sbjct: 533 ----ALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRV 587
Query: 663 AEEVAYSGR-ISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSI 705
AEEV + ++TGA +D + + +A + I +G ++ IG V++
Sbjct: 588 AEEVIFGDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAV 631
Score = 39 (18.8 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 185 YSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNK 226
YS+FL+ + +V +V + DGS+ + + N+
Sbjct: 136 YSEFLNAVKKGKVERV---------RFSKDGSVVQLTAVDNR 168
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 210/477 (44%), Positives = 294/477 (61%)
Query: 250 PSDIKTPYEKMLENQVEFGS-PDKRSG---GFLNSALIALFYVAVLAGLLHRFPVSFSQT 305
P++ ++ ++ + S P + +G GF+ + + F V ++A L F S S
Sbjct: 89 PTNAPELIARLRDSNIRLDSHPVRNNGMVWGFVGNLI---FPVLLIASLFFLFRRS-SNM 144
Query: 306 AGQVGHRKTRGPGGAKVSEQGDT-ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARP 364
G G G A+ T + F DVAG+DEAKEEL+E+V FL+ P+++ +GA+
Sbjct: 145 PGGPGQAMNFGKSKARFQMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKI 204
Query: 365 PRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEA 424
P+GVLLVG PGTGKTLLAKA+AGEA VPF S S SEFVE++VG+GASRVRDLF +AK+ A
Sbjct: 205 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 264
Query: 425 PSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVL 484
P +IFIDEIDAV + R NDEREQTLNQLLTEMDGF+ N+ +I++ ATNR DVL
Sbjct: 265 PCLIFIDEIDAVGRQRGAGIG-GGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVL 323
Query: 485 DPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXX 544
D AL RPGRFDR VMV+ PD GR+ IL+VH K+L A ++ + IA T GF+G
Sbjct: 324 DSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKL--APEVSIDSIARRTPGFSGADL 381
Query: 545 XXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVV 604
R K + ++ AV+R +AG+E T + K ++A HE GHA+V
Sbjct: 382 ANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGMEG-TPLVDSKSKRLIAYHEVGHAIV 440
Query: 605 GTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAE 664
GT LL V+K++++PR G A G T+ NE++ L +L R+ +GGRAAE
Sbjct: 441 GT----LLKDHDPVQKVTLIPR-GQAQGLTWFTPNEEQGLTTKAQLMARIAGAMGGRAAE 495
Query: 665 EVAYSG-RISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGV 720
E + ++TGA D+++ T+MA + + +G++ +GP+S+ SSGG GGG+
Sbjct: 496 EEVFGDDEVTTGAGGDLQQVTEMARQMVTRFGMSN-LGPISLE--SSGGEVFLGGGL 549
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 887 (317.3 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 209/493 (42%), Positives = 294/493 (59%)
Query: 216 SIQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSG 275
++++ +V T + + + ++ T +TT P + + + +
Sbjct: 43 NVRDGQVATVEVKSDQRTIEGSKRTGE-KFTTIMPLYDQDLINDLDRKGITMKGQEAEES 101
Query: 276 GFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKV-SEQGDTITFADV 334
GFL I+ F + +L G+ F + Q G G + G AK+ SE TFADV
Sbjct: 102 GFLTQIFISWFPMLLLIGVWIFF-MRQMQGGGGKG-AMSFGKSKAKLMSEDQIKTTFADV 159
Query: 335 AGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFI 394
AG DEAKEE++E+V++LR P K+ +LG R P GVL+VG PGTGKTLLAKA+AGE++VPF
Sbjct: 160 AGCDEAKEEVKELVDYLRDPTKFQKLGGRIPTGVLMVGPPGTGKTLLAKAIAGESKVPFF 219
Query: 395 SCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQ 454
+ S S+FVE++VG+GASRVRD+F +AKK AP IIFIDEIDAV + R G +DEREQ
Sbjct: 220 TISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQR-GAGLGGGHDEREQ 278
Query: 455 TLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKV 514
TLNQ+L EMDGF+ N +IV+ ATNR DVLD AL RPGRFDR V+V PD GRE ILKV
Sbjct: 279 TLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQVVVGLPDVRGREQILKV 338
Query: 515 HVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVER 574
H+ K +PL++D+ IA T GF+G R N+ VV +F A ++
Sbjct: 339 HMRK--VPLSEDVKASVIARGTPGFSGADLANLVNEAALFAARGNRRVVGMEEFERAKDK 396
Query: 575 SIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFT 634
+ G E+++ + +EK + A HEAGHA+VG L+P V K++I+PR G ALG T
Sbjct: 397 IMMGAERRSMVMSEAEKEMTAYHEAGHAIVGC----LVPEHDPVHKVTIIPR-GRALGVT 451
Query: 635 YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY-SGRISTGALDDIRRATDMAYKAIAE 693
+ D +L ++ GGR AEE+ Y + ++STGA DI+ AT +A + +
Sbjct: 452 FFLPEADAISQSRRKLESQISVAYGGRLAEELIYGTEKVSTGASQDIKYATSIARNMVTQ 511
Query: 694 YGLNRTIGPVSIA 706
+G + +GP+ A
Sbjct: 512 WGFSDKLGPLLYA 524
Score = 54 (24.1 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 171 GSEPRTSTTFVSVPYSDFLSKINSNQVAKVEV 202
G P +S++ + YS FL + QVA VEV
Sbjct: 24 GYSPSSSSS-QKMDYSTFLDNVRDGQVATVEV 54
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
Identities = 199/398 (50%), Positives = 261/398 (65%)
Query: 316 GPGGAKV-SEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLP 374
G AK+ +++ + F DVAG DE K+EL E+VEFL+ P K+ +GAR P+GVLLVG P
Sbjct: 145 GKSKAKLYNDEKKKVRFRDVAGADEEKQELVEVVEFLKDPRKFAEVGARIPKGVLLVGPP 204
Query: 375 GTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEID 434
GTGKTLLA+AVAGEA VPF S S S+FVE++VG+GASRVRDLF AKK AP IIFIDEID
Sbjct: 205 GTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEID 264
Query: 435 AVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRF 494
AV + R G +DEREQTLNQLL EMDGF +N +I++ ATNR D+LDPAL RPGRF
Sbjct: 265 AVGRQR-GAGLGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRF 323
Query: 495 DRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXX 554
DR + V+ PD GREA+LKVH K PL ++I+L IA+ T GF+G
Sbjct: 324 DRQITVDRPDVNGREAVLKVHARNK--PLDENINLRAIATRTPGFSGADLENLLNEAALV 381
Query: 555 XGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPG 614
R +K ++ D A +R IAG KK+ + E+ +VA HEAGH V+G +L
Sbjct: 382 AARQDKKKIDMSDIDEATDRVIAGPAKKSRVISEKERNIVAFHEAGHTVIGV----VLDE 437
Query: 615 QPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRIST 674
V K++I+PR G A G+ EDRY + EL ++ LLGGR AEE+ + G +ST
Sbjct: 438 ADVVHKVTIVPR-GQAGGYAVMLPKEDRYFMTKPELLDKITGLLGGRVAEEIVF-GEVST 495
Query: 675 GALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGG 712
GA +D +RAT +A + + E+G++ +GP+ + S GG
Sbjct: 496 GAHNDFQRATGIARRMVTEFGMSDKLGPMQFGS-SQGG 532
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 220/500 (44%), Positives = 302/500 (60%)
Query: 212 KNDGSIQESEVITNKFQESESLLKSVTPTKRIV--YTTTRPSDIKTPYEKMLENQVEF-G 268
K D S EV ++ +E+ + + TK+ YTT P + +L V+ G
Sbjct: 31 KVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVG 90
Query: 269 SPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKV-SEQGD 327
P + L S I+ F + +L G+ F + Q G G + G A++ +E
Sbjct: 91 EPPEEPS-LLASIFISWFPMLLLIGVWIFF-MRQMQGGGGKG-AMSFGKSKARMLTEDQI 147
Query: 328 TITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
TFADVAG DEAKEE+ E+VE+LR P ++ +LG + P+GVL+VG PGTGKTLLAKA+AG
Sbjct: 148 KTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAG 207
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
EA+VPF + S S+FVE++VG+GASRVRD+F +AKK AP IIFIDEIDAV + R G
Sbjct: 208 EAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQR-GAGLGG 266
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+DEREQTLNQ+L EMDGF+ N +IV+ ATNR DVLDPAL RPGRFDR V+V PD G
Sbjct: 267 GHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRG 326
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
RE ILKVH+ + +PLA DID IA T GF+G R NK VV ++
Sbjct: 327 REQILKVHM--RRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVE 384
Query: 568 FIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRT 627
F A ++ + G E+++ + ++K A HEAGHA++G L+P V K++I+PR
Sbjct: 385 FEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGR----LVPEHDPVHKVTIIPR- 439
Query: 628 GGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGR-ISTGALDDIRRATDM 686
G ALG T+ D +L ++ TL GGR AEE+ Y +STGA +DI+ AT++
Sbjct: 440 GRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNL 499
Query: 687 AYKAIAEYGLNRTIGPVSIA 706
A + ++G + +GP+ A
Sbjct: 500 ARNMVTQWGFSEKLGPLLYA 519
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 222/495 (44%), Positives = 302/495 (61%)
Query: 214 DGSIQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKR 273
D S+ + VIT + + E+ K+V P Y +D+ + E ++ P++
Sbjct: 48 DASVDRNGVITGEKRSGEAY-KTVIPGG---YDRDLINDLVKQGVRA-EGKL----PEET 98
Query: 274 SGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDTITFAD 333
S FL + ++ F + +L G+ F + Q G G ++SE+ TFAD
Sbjct: 99 S--FLTTIFVSWFPMILLIGVWIFF-MRQMQGGGGKGAMSFGKSKARQLSEEQIKTTFAD 155
Query: 334 VAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPF 393
VAG DEAKE++ E+V++LR P ++ +LG R P G+LLVG PGTGKTLLAKA+AGEA+VPF
Sbjct: 156 VAGCDEAKEDVAELVDYLREPSRFQKLGGRIPSGILLVGQPGTGKTLLAKAIAGEAKVPF 215
Query: 394 ISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDERE 453
+ S S+FVE++VG+GASRVRD+F +AKK AP IIFIDEIDAV + R G +DERE
Sbjct: 216 FTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQR-GAGMGGGHDERE 274
Query: 454 QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILK 513
QTLNQ+L EMDGF+ N VIV+ ATNR DVLDPAL RPGRFDR V V PD GRE ILK
Sbjct: 275 QTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVTVGLPDIRGREQILK 334
Query: 514 VHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVE 573
VH+ K +PL D+ IA T GF+G R + VV +F A +
Sbjct: 335 VHMRK--VPLGDDVKAEVIARGTPGFSGADLANLVNEAALCAARTARRVVSMKEFDAAKD 392
Query: 574 RSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGF 633
+ + G E+K+ + SE+ + A HEAGHA++G L+P V K+SI+PR G ALG
Sbjct: 393 KIMMGSERKSMVMSESEREMTAYHEAGHAIIGR----LVPDHDPVYKVSIIPR-GRALGV 447
Query: 634 T-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY-SGRISTGALDDIRRATDMAYKAI 691
T Y P +DR+ L + +L GGR AEEV Y S ++STGA +DI RAT++A K +
Sbjct: 448 TMYLP-EQDRFSHSKQHLESNISSLYGGRVAEEVIYGSDKVSTGASNDIERATNIARKMV 506
Query: 692 AEYGLNRTIGPVSIA 706
++GL+ +GP+ A
Sbjct: 507 TQWGLSEKMGPMLFA 521
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 881 (315.2 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 188/400 (47%), Positives = 260/400 (65%)
Query: 308 QVGHRKTRGPGGAKVSEQGDT---ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARP 364
Q+G +T G ++ D+ +TF DVAG++EAKEEL EIV+FL+ K+ +LG +
Sbjct: 131 QLGGNRTMGFSKSRARLMTDSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKI 190
Query: 365 PRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEA 424
P+G LL+G PGTGKTLLA+A+AGEA VPF S S S+FVE++VG+GASRVRD+F + KK A
Sbjct: 191 PKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHA 250
Query: 425 PSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVL 484
P IIF+DEIDAV + R G NDEREQTLNQLL EMDGF+SN V+++ ATNR DVL
Sbjct: 251 PCIIFVDEIDAVGRHR-GIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVL 309
Query: 485 DPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXX 544
DPAL RPGRFDR V + PD GRE I+ VH K++PLA D+DL IA T GF+G
Sbjct: 310 DPALLRPGRFDRQVTISIPDINGREKIIAVHA--KKVPLAPDVDLRVIARGTPGFSGADL 367
Query: 545 XXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVV 604
RL+K +V DF +A ++ + G E+K+ ++ E+ + A HEAGHAVV
Sbjct: 368 ANLVNEAALIAARLDKKIVTMCDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVV 427
Query: 605 GTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAE 664
A P + K +I+PR G +LG DR +++ L +GGRAAE
Sbjct: 428 ----AFHNPASDPIHKATIIPR-GRSLGLVMRLPETDRVSHTREKMLADLTVAMGGRAAE 482
Query: 665 EVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPV 703
E+ + ++++GA DI++ATD+A + ++G++ ++GP+
Sbjct: 483 ELIFGYNKVTSGASSDIKQATDLAKSMVMKWGMSDSVGPL 522
Score = 53 (23.7 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 181 VSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKN 213
VS+P+S+FL ++ V V + I K N
Sbjct: 37 VSIPFSEFLVRLEDGSVESVSITEHEISGKFHN 69
Score = 46 (21.3 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 38 YHNTYRFASHAILFPSVIISNSQQKL 63
+HN +F +H +++ +I + QK+
Sbjct: 67 FHNGVKFRTHGVVYDGLIKTMHAQKV 92
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 881 (315.2 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 188/400 (47%), Positives = 260/400 (65%)
Query: 308 QVGHRKTRGPGGAKVSEQGDT---ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARP 364
Q+G +T G ++ D+ +TF DVAG++EAKEEL EIV+FL+ K+ +LG +
Sbjct: 131 QLGGNRTMGFSKSRARLMTDSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKI 190
Query: 365 PRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEA 424
P+G LL+G PGTGKTLLA+A+AGEA VPF S S S+FVE++VG+GASRVRD+F + KK A
Sbjct: 191 PKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHA 250
Query: 425 PSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVL 484
P IIF+DEIDAV + R G NDEREQTLNQLL EMDGF+SN V+++ ATNR DVL
Sbjct: 251 PCIIFVDEIDAVGRHR-GIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVL 309
Query: 485 DPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXX 544
DPAL RPGRFDR V + PD GRE I+ VH K++PLA D+DL IA T GF+G
Sbjct: 310 DPALLRPGRFDRQVTISIPDINGREKIIAVHA--KKVPLAPDVDLRVIARGTPGFSGADL 367
Query: 545 XXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVV 604
RL+K +V DF +A ++ + G E+K+ ++ E+ + A HEAGHAVV
Sbjct: 368 ANLVNEAALIAARLDKKIVTMCDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVV 427
Query: 605 GTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAE 664
A P + K +I+PR G +LG DR +++ L +GGRAAE
Sbjct: 428 ----AFHNPASDPIHKATIIPR-GRSLGLVMRLPETDRVSHTREKMLADLTVAMGGRAAE 482
Query: 665 EVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPV 703
E+ + ++++GA DI++ATD+A + ++G++ ++GP+
Sbjct: 483 ELIFGYNKVTSGASSDIKQATDLAKSMVMKWGMSDSVGPL 522
Score = 53 (23.7 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 181 VSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKN 213
VS+P+S+FL ++ V V + I K N
Sbjct: 37 VSIPFSEFLVRLEDGSVESVSITEHEISGKFHN 69
Score = 46 (21.3 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 38 YHNTYRFASHAILFPSVIISNSQQKL 63
+HN +F +H +++ +I + QK+
Sbjct: 67 FHNGVKFRTHGVVYDGLIKTMHAQKV 92
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 887 (317.3 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 203/447 (45%), Positives = 273/447 (61%)
Query: 262 ENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAK 321
EN+V + G FL S L + +A L + R P +T +G + G AK
Sbjct: 238 ENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAK 297
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
V + + F DVAG +EAK E+ E V FL++P +Y LGA+ P+G +L G PGTGKTLL
Sbjct: 298 VLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLL 357
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKA AGEA VPFI+ S SEF+E++VG+G +RVRDLFA A+K AP I+FIDEIDAV + R
Sbjct: 358 AKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR- 416
Query: 442 GRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
GR E+E TLNQLL EMDGF++ + V++L TNR D+LDPAL RPGRFDR + +
Sbjct: 417 GRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIG 476
Query: 502 TPDKIGREAILKVHVS--KKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR-L 558
PD GR +I KVH+ K + L KD +AS+T GF+G R L
Sbjct: 477 PPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHL 536
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRV 618
+ + +K F A+ER I G+EKKT L+ EK VA HEAGHAV G + P +
Sbjct: 537 SDSINQK-HFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP----L 591
Query: 619 EKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGAL 677
K+SI+PR G LG+ Y P +++YL ++L R+ LGGR +EE+ + GRI+TGA
Sbjct: 592 LKVSIIPR-GKGLGYAQYLP--KEQYLYTKEQLLDRMCMTLGGRVSEEIFF-GRITTGAQ 647
Query: 678 DDIRRATDMAYKAIAEYGLNRTIGPVS 704
DD+R+ T AY I ++G+N +G +S
Sbjct: 648 DDLRKVTQSAYAQIVQFGMNEKVGQIS 674
Score = 37 (18.1 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 159 VMRLLRPGIPLPGSEP--RTSTTFVS 182
+ +LL PG PG +P RT FV+
Sbjct: 19 LQQLLVPGGVGPGEQPCLRTLYRFVT 44
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
Identities = 205/460 (44%), Positives = 286/460 (62%)
Query: 258 EKMLENQVEFGSPDKRS--GGFLNSALIALFYVAVLAG---LLHRFPVSFSQTAGQVGHR 312
+K+ ++F + + + G L + + L + A+L G LL R G G+
Sbjct: 147 QKLRAKNIDFAAHNAQEDQGSVLFNLIGNLAFPALLIGGLFLLSRRSGGGMGGPGGPGNP 206
Query: 313 KTRGPGGAKVSEQGDT-ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLV 371
G AK + +T +TF DVAGVDEAK++ E+VEFL+ P+++ +GA+ P+GVLL+
Sbjct: 207 LQFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLI 266
Query: 372 GLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFID 431
G PGTGKTLLAKA+AGEA VPF S S SEFVE++VG+GASRVRDLF +AK+ AP I+F+D
Sbjct: 267 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 326
Query: 432 EIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRP 491
EIDAV + R G NDEREQTLNQLLTEMDGF+ N+ VIV+ ATNR+D+LD AL RP
Sbjct: 327 EIDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRP 385
Query: 492 GRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXX 551
GRFDR V V+ PD GR ILKVH K+ D+ L IA T GF+G
Sbjct: 386 GRFDRQVSVDVPDVKGRTDILKVHAGNKKFD--NDVSLEIIAMRTPGFSGADLANLLNEA 443
Query: 552 XXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASL 611
GR + + + +++R +AG+E T G K++VA HE GHAV GT L
Sbjct: 444 AILAGRRARTSISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAVCGT----L 498
Query: 612 LPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYS-G 670
PG V+K++++PR G A G T+ ++D L+ +L R+V LGGRAAEE+ +
Sbjct: 499 TPGHDAVQKVTLIPR-GQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGDS 557
Query: 671 RISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSS 710
++TGA+ D+++ T +A + + +G++ IGP S+ S+
Sbjct: 558 EVTTGAVGDLQQITGLARQMVTTFGMS-DIGPWSLMDSSA 596
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
Identities = 211/466 (45%), Positives = 289/466 (62%)
Query: 245 YTTTRPSDIKTPYEKMLENQVEF-GSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFS 303
Y T P + + ++ V+ G+P + L + I+ F + +L G+ F +
Sbjct: 70 YVTYMPVYDQKLLDDLINQDVKVQGTPPEEQS-LLGTIFISWFPMILLIGVWIFF-MRQM 127
Query: 304 QTAGQVGHRKTRGPGGAKV-SEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGA 362
Q G G + G A++ SE TF+DVAG DEAKE+++E+V++LR P ++ +LG
Sbjct: 128 QGGGGKG-AMSFGKSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGG 186
Query: 363 RPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKK 422
+ P GVL+VG PGTGKTLLAKA+AGEA+VPF + S S+FVE++VG+GASRVRD+F +AKK
Sbjct: 187 KIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKK 246
Query: 423 EAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSD 482
+P IIFIDEIDAV + R G +DEREQTLNQ+L EMDGF+ N +IV+ ATNR D
Sbjct: 247 ASPCIIFIDEIDAVGRQR-GAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPD 305
Query: 483 VLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGX 542
VLDPAL RPGRFDR V+V PD GRE ILKVH+ K +PLA D++ IA T GF+G
Sbjct: 306 VLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRK--VPLANDVEPSLIARGTPGFSGA 363
Query: 543 XXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHA 602
R NK V ++F A ++ + G E+++ + K A HEAGHA
Sbjct: 364 DLANLVNEAALFAARGNKRNVSMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGHA 423
Query: 603 VVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGR 661
VVG L+P V K+SI+PR G ALG T Y P +DR + L + +L GGR
Sbjct: 424 VVGR----LVPEHDPVYKVSIIPR-GRALGVTMYLP-EQDRVSMSKQHLESMISSLYGGR 477
Query: 662 AAEEVAYSG-RISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIA 706
AEE+ Y ++STGA +DI RAT++A K + ++G + +GP+ A
Sbjct: 478 LAEELIYGKEKVSTGASNDIERATEIARKMVTQWGFSEKLGPMLYA 523
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
Identities = 211/466 (45%), Positives = 289/466 (62%)
Query: 245 YTTTRPSDIKTPYEKMLENQVEF-GSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFS 303
Y T P + + ++ V+ G+P + L + I+ F + +L G+ F +
Sbjct: 70 YVTYMPVYDQKLLDDLINQDVKVQGTPPEEQS-LLGTIFISWFPMILLIGVWIFF-MRQM 127
Query: 304 QTAGQVGHRKTRGPGGAKV-SEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGA 362
Q G G + G A++ SE TF+DVAG DEAKE+++E+V++LR P ++ +LG
Sbjct: 128 QGGGGKG-AMSFGKSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGG 186
Query: 363 RPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKK 422
+ P GVL+VG PGTGKTLLAKA+AGEA+VPF + S S+FVE++VG+GASRVRD+F +AKK
Sbjct: 187 KIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKK 246
Query: 423 EAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSD 482
+P IIFIDEIDAV + R G +DEREQTLNQ+L EMDGF+ N +IV+ ATNR D
Sbjct: 247 ASPCIIFIDEIDAVGRQR-GAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPD 305
Query: 483 VLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGX 542
VLDPAL RPGRFDR V+V PD GRE ILKVH+ K +PLA D++ IA T GF+G
Sbjct: 306 VLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRK--VPLANDVEPSLIARGTPGFSGA 363
Query: 543 XXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHA 602
R NK V ++F A ++ + G E+++ + K A HEAGHA
Sbjct: 364 DLANLVNEAALFAARGNKRNVSMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGHA 423
Query: 603 VVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGR 661
VVG L+P V K+SI+PR G ALG T Y P +DR + L + +L GGR
Sbjct: 424 VVGR----LVPEHDPVYKVSIIPR-GRALGVTMYLP-EQDRVSMSKQHLESMISSLYGGR 477
Query: 662 AAEEVAYSG-RISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIA 706
AEE+ Y ++STGA +DI RAT++A K + ++G + +GP+ A
Sbjct: 478 LAEELIYGKEKVSTGASNDIERATEIARKMVTQWGFSEKLGPMLYA 523
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 204/455 (44%), Positives = 280/455 (61%)
Query: 258 EKMLENQVEFGS---PDKRSGGFLNSALIALFYVAVLAGL--LHRFPVSFSQTAGQVGHR 312
+K+ ++F + + + LN F V ++ GL L R G G
Sbjct: 140 QKLRAKNIDFAAHNAQEDQGSPILNLIGNLAFPVILIGGLFLLSRRSSGGMGGPGGPGFP 199
Query: 313 KTRGPGGAKVSEQGDT-ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLV 371
G AK + +T +TF DVAGVDEAK++ E+VEFL+ P+++ +GAR P+GVLLV
Sbjct: 200 LQIGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLV 259
Query: 372 GLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFID 431
G PGTGKTLLAKA+AGEA VPF S S SEFVE++VG+GASRVRDLF +AK+ AP I+F+D
Sbjct: 260 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 319
Query: 432 EIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRP 491
EIDAV + R G NDEREQTLNQLLTEMDGF+ N+ VIV+ ATNR+D+LD AL RP
Sbjct: 320 EIDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRP 378
Query: 492 GRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXX 551
GRFDR V V+ PD GR ILKVH K+ +++ IA T GF+G
Sbjct: 379 GRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEV--IAMRTPGFSGADLANLLNEA 436
Query: 552 XXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASL 611
GR K + + +++R +AG+E T G K++VA HE GHA+ GT L
Sbjct: 437 AILAGRRGKTAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGT----L 491
Query: 612 LPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYS-G 670
PG V+K++++PR G A G T+ ++D L+ +L R+V LGGRAAEEV +
Sbjct: 492 TPGHDAVQKVTLIPR-GQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGES 550
Query: 671 RISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSI 705
++TGA+ D+++ T +A + + +G++ IGP S+
Sbjct: 551 EVTTGAVSDLQQITGLAKQMVTTFGMSE-IGPWSL 584
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 841 (301.1 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 185/387 (47%), Positives = 249/387 (64%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
K + T+ F+DVAG+ EAK E+EE V FL++P K+ +GA+ PRG +LVG PGTGKTL
Sbjct: 291 KFEKSTSTVKFSDVAGLGEAKVEIEEFVNFLKNPKKFHDIGAKIPRGAILVGPPGTGKTL 350
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
+AKA AGEA VPF S S S+FVE++VG+G SRVRDLF +A+K AP I+FIDEIDAV ++R
Sbjct: 351 IAKATAGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEIDAVGRAR 410
Query: 441 D-GRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
G F SNDERE TLNQLL EMDGF V+VL ATNR D+LD AL RPGRFDR +
Sbjct: 411 GKGGFS-GSNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRFDRQIT 469
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGD-IASMTTGFTGXXXXXXXXXXXXXXGRL 558
++ PD RE I +VH++ L L K I+ + ++ +T GF+G R
Sbjct: 470 IDNPDLKSREEIFRVHLAA--LLLDKSINYAERLSKLTPGFSGADIANVCNEAALIAARR 527
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRV 618
+ ++ F AV+R I G+EKK L +EK VA HEAGHAVV + P +
Sbjct: 528 HAEIITLEHFDAAVDRVIGGLEKKNKVLSPTEKRTVAYHEAGHAVVSWFLKHCHP----L 583
Query: 619 EKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGAL 677
K+SI+PR ALG+ Y P ++++L +++ + LGGR AE++ + G I+TGA
Sbjct: 584 LKVSIVPRGVAALGYAQYLP--KEQFLQNQEQIFDMMCMALGGRVAEQLTF-GTITTGAQ 640
Query: 678 DDIRRATDMAYKAIAEYGLNRTIGPVS 704
DD+ + T MAY ++ YG+N IGP+S
Sbjct: 641 DDLEKITKMAYSQVSIYGMNEKIGPLS 667
Score = 71 (30.1 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 FVMRLLRPGIPLPGSEPRTSTTFVSVPYSDFLSKINSNQVAKVEV-DGVHIMFKLKNDGS 216
+++ ++ G+ L P T + +S+FL +++ N+ +K+ V DG +KL +DG
Sbjct: 149 YLITVISIGVILSLFRPNTEEGN-EIKFSEFLDELSENKPSKIVVTDGYANTYKLNDDG- 206
Query: 217 IQESEVITNKFQ 228
+ S ITN F+
Sbjct: 207 VTYS--ITNSFK 216
Score = 48 (22.0 bits), Expect = 5.0e-87, Sum P(2) = 5.0e-87
Identities = 13/61 (21%), Positives = 32/61 (52%)
Query: 180 FVSVPYSDFLS-KINSNQVAKVEVDGVHIMFK----LKNDGSIQESEVITNKFQESESLL 234
F+ + Y ++ ++ QV + G +++F+ +K++ + + NKF++S S +
Sbjct: 241 FIPISYHEYFDPRVALIQVIPYAIIG-YLIFRTFRSIKSNKMFSQGKSTANKFEKSTSTV 299
Query: 235 K 235
K
Sbjct: 300 K 300
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 204/447 (45%), Positives = 273/447 (61%)
Query: 262 ENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAK 321
EN+V + G FL S L + +A L + R P +T +G + G AK
Sbjct: 237 ENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAK 296
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
V + + F DVAG +EAK E+ E V FL++P +Y LGA+ P+G +L G PGTGKTLL
Sbjct: 297 VLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLL 356
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKA AGEA VPFI+ S SEF+E++VG+G +RVRDLFA A+K AP I+FIDEIDAV + R
Sbjct: 357 AKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR- 415
Query: 442 GRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
GR E+E TLNQLL EMDGF++ + V++L TNR D+LDPAL RPGRFDR + +
Sbjct: 416 GRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIG 475
Query: 502 TPDKIGREAILKVHVS--KKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR-L 558
PD GR +I KVH+ K + L KD +AS+T GF+G R L
Sbjct: 476 PPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHL 535
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRV 618
+ + EK F A+ER I G+EKKT L+ EK VA HEAGHAV G + P +
Sbjct: 536 SDAINEK-HFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP----L 590
Query: 619 EKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGAL 677
K+SI+PR G LG+ Y P +++YL ++L R+ LGGR +EE+ + GRI+TGA
Sbjct: 591 LKVSIIPR-GKGLGYAQYLP--KEQYLYTKEQLLDRMCMTLGGRVSEEIFF-GRITTGAQ 646
Query: 678 DDIRRATDMAYKAIAEYGLNRTIGPVS 704
DD+R+ T AY I ++G+N +G +S
Sbjct: 647 DDLRKVTQSAYAQIVQFGMNEKVGQIS 673
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 204/447 (45%), Positives = 273/447 (61%)
Query: 262 ENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAK 321
EN+V + G FL S L + +A L + R P +T +G + G AK
Sbjct: 237 ENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAK 296
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
V + + F DVAG +EAK E+ E V FL++P +Y LGA+ P+G +L G PGTGKTLL
Sbjct: 297 VLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLL 356
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKA AGEA VPFI+ S SEF+E++VG+G +RVRDLFA A+K AP I+FIDEIDAV + R
Sbjct: 357 AKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR- 415
Query: 442 GRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
GR E+E TLNQLL EMDGF++ + V++L TNR D+LDPAL RPGRFDR + +
Sbjct: 416 GRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIG 475
Query: 502 TPDKIGREAILKVHVS--KKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR-L 558
PD GR +I KVH+ K + L KD +AS+T GF+G R L
Sbjct: 476 PPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHL 535
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRV 618
+ + EK F A+ER I G+EKKT L+ EK VA HEAGHAV G + P +
Sbjct: 536 SDAINEK-HFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP----L 590
Query: 619 EKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGAL 677
K+SI+PR G LG+ Y P +++YL ++L R+ LGGR +EE+ + GRI+TGA
Sbjct: 591 LKVSIIPR-GKGLGYAQYLP--KEQYLYTKEQLLDRMCMTLGGRVSEEIFF-GRITTGAQ 646
Query: 678 DDIRRATDMAYKAIAEYGLNRTIGPVS 704
DD+R+ T AY I ++G+N +G +S
Sbjct: 647 DDLRKVTQSAYAQIVQFGMNEKVGQIS 673
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
Identities = 199/445 (44%), Positives = 277/445 (62%)
Query: 263 NQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKV 322
NQ + G FL S + L V++L + R P+ + G+ G + G AK+
Sbjct: 232 NQAAVVYTTESDGSFLRSLVPTLVLVSILLYAMRRGPMGTGR-GGRGGGLFSVGETTAKI 290
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
+ + FADVAG +EAK E+ E V FL++P +Y LGA+ P+G +L G PGTGKTLLA
Sbjct: 291 LKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLA 350
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KA AGEA VPFI+ + SEF+E++VG+G +RVRD+FA A+K AP I+FIDEIDA+ + R G
Sbjct: 351 KATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKR-G 409
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
R + E+E TLNQ+L EMDGF+S++ V+VL TNR D+LDPAL RPGRFDR + +
Sbjct: 410 RGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGP 469
Query: 503 PDKIGREAILKVHVSKKELP--LAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD GR +I KVH+ +L L+KD +A++T GFTG R
Sbjct: 470 PDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLS 529
Query: 561 VVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEK 620
V++ F A+ER I G+EKKT L+ SEK VA HEAGHAVVG + P + K
Sbjct: 530 PSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADP----LLK 585
Query: 621 LSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDD 679
+SI+PR G LG+ Y P +++L ++L R+ +LGGR AE++ + G+I+TGA DD
Sbjct: 586 VSIIPR-GKGLGYAQYLP--REQFLYTREQLFDRMCMMLGGRVAEQLFF-GQITTGAQDD 641
Query: 680 IRRATDMAYKAIAEYGLNRTIGPVS 704
+R+ T AY I ++G++ +G VS
Sbjct: 642 LRKVTQSAYAQIVQFGMSEKLGQVS 666
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
Identities = 199/445 (44%), Positives = 275/445 (61%)
Query: 263 NQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKV 322
NQV + G L S + L V +L + R P+ + G+ G + G AK+
Sbjct: 204 NQVSVVYTTESDGSLLRSLVPTLVLVGILLYAMKRGPMGTGR-GGRGGGLFSVGETTAKI 262
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
+ + FADVAG +EAK E+ E V FL++P +Y LGA+ P+G +L G PGTGKTLLA
Sbjct: 263 LKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLA 322
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KA AGEA+VPFI+ + SEF+E++VG+G +RVRD+FA A+K AP I+FIDEIDA+ + R G
Sbjct: 323 KATAGEAKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKR-G 381
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
R + E+E TLNQ+L EMDGF+S + V+VL TNR D+LDPAL RPGRFDR + +
Sbjct: 382 RGHLGGQSEQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGP 441
Query: 503 PDKIGREAILKVHVSKKELP--LAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD GR +I KVH+ +L L +D +A++T GFTG R
Sbjct: 442 PDIKGRSSIFKVHLRPLKLDESLTRDALSRKLAALTPGFTGADISNVCNEAALIAARHLS 501
Query: 561 VVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEK 620
V++ F A+ER I G+EKKT L+ SEK VA HEAGHAVVG + P + K
Sbjct: 502 PSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADP----LLK 557
Query: 621 LSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDD 679
+SI+PR G LG+ Y P ++YL ++L R+ +LGGR AE++ + G+I+TGA DD
Sbjct: 558 VSIIPR-GKGLGYAQYLP--REQYLYTREQLFDRMCMMLGGRVAEQLFF-GQITTGAQDD 613
Query: 680 IRRATDMAYKAIAEYGLNRTIGPVS 704
+R+ T AY I ++G++ +G VS
Sbjct: 614 LRKVTQSAYAQIVQFGMSEKLGQVS 638
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 202/447 (45%), Positives = 273/447 (61%)
Query: 262 ENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAK 321
EN+V + G FL S L + +A L + R P +T +G + G AK
Sbjct: 239 ENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAK 298
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
V + + F DVAG +EAK E+ E V FL++P +Y LGA+ P+G +L G PGTGKTLL
Sbjct: 299 VLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLL 358
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKA AGEA VPFI+ S SEF+E++VG+G +RVRDLFA A+K AP I+FIDEIDAV + R
Sbjct: 359 AKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR- 417
Query: 442 GRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
GR E+E TLNQLL EMDGF++ + V++L TNR D+LDPAL RPGRFDR + +
Sbjct: 418 GRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIG 477
Query: 502 TPDKIGREAILKVHVS--KKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR-L 558
PD GR +I KVH+ K + L K+ +AS+T GF+G R L
Sbjct: 478 PPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAALIAARHL 537
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRV 618
+ + +K F A+ER I G+EKKT L+ EK VA HEAGHAV G + P +
Sbjct: 538 SDSINQK-HFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP----L 592
Query: 619 EKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGAL 677
K+SI+PR G LG+ Y P +++YL ++L R+ LGGR +EE+ + GRI+TGA
Sbjct: 593 LKVSIIPR-GKGLGYAQYLP--KEQYLYTKEQLLDRMCMTLGGRVSEEIFF-GRITTGAQ 648
Query: 678 DDIRRATDMAYKAIAEYGLNRTIGPVS 704
DD+R+ T AY I ++G+N +G +S
Sbjct: 649 DDLRKVTQSAYAQIVQFGMNEKVGQIS 675
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 202/447 (45%), Positives = 272/447 (60%)
Query: 262 ENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAK 321
EN+V + G FL S L + +A L + R P +T +G + G AK
Sbjct: 239 ENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAK 298
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
V + + F DVAG +EAK E+ E V FL++P +Y LGA+ P+G +L G PGTGKTLL
Sbjct: 299 VLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLL 358
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKA AGEA VPFI+ S SEF+E++VG+G +RVRDLFA A+K AP I+FIDEIDAV + R
Sbjct: 359 AKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR- 417
Query: 442 GRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
GR E+E TLNQLL EMDGF++ + V++L TNR D+LDPAL RPGRFDR + +
Sbjct: 418 GRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIG 477
Query: 502 TPDKIGREAILKVHVS--KKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR-L 558
PD GR +I KVH+ K + L K+ +AS+T GF+G R L
Sbjct: 478 PPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHL 537
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRV 618
+ + +K F A+ER I G+EKKT L+ EK VA HEAGHAV G + P +
Sbjct: 538 SDSINQK-HFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP----L 592
Query: 619 EKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGAL 677
K+SI+PR G LG+ Y P ++YL ++L R+ LGGR +EE+ + GRI+TGA
Sbjct: 593 LKVSIIPR-GKGLGYAQYLP--REQYLYTREQLLDRMCMTLGGRVSEEIFF-GRITTGAQ 648
Query: 678 DDIRRATDMAYKAIAEYGLNRTIGPVS 704
DD+R+ T AY I ++G+N +G +S
Sbjct: 649 DDLRKVTQSAYAQIVQFGMNEKVGQIS 675
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 217/531 (40%), Positives = 310/531 (58%)
Query: 181 VSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDG--SIQESEV-ITNKFQESESLLKSV 237
V+ Y F KI + K+ + K+ N+ SI E IT K ++
Sbjct: 18 VAAAYVQFNDKIINGNTIKLPFS--EFLNKIDNNEVESINIGEHNITGKLKDGSKF---- 71
Query: 238 TPTKRIVYTTTRPSDIKTPYEKMLENQVEFGS-PDKRSGGFLNSALIALFYVAVLAGLLH 296
T IVY + IKT + + QV F P+ G L++ L++ F + +L +
Sbjct: 72 -QTTAIVYDSL----IKTLHNQ----QVTFTFLPEDTFFGVLSNILVSWFPMLLLVIIWF 122
Query: 297 RFPVSFSQTAGQ--VGHRKTRGPGGAKV-SEQGDTITFADVAGVDEAKEELEEIVEFLRS 353
F + Q G + K+R AK+ +E + +TF DVAG+DEAKEEL EIV+FL+
Sbjct: 123 IF-LKRMQIGGNRTINFSKSR----AKLMTENRNKVTFNDVAGIDEAKEELIEIVDFLKH 177
Query: 354 PDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRV 413
++ +LG + P+G LL+G PGTGKTLLA+A+AGEA VPF S S S+FVE++VG+GASRV
Sbjct: 178 RQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRV 237
Query: 414 RDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVI 473
RD+F + KK AP IIFIDEIDAV + R G NDEREQTLNQLL EMDGF+SN VI
Sbjct: 238 RDMFEQGKKNAPCIIFIDEIDAVGRHR-GIGLGGGNDEREQTLNQLLVEMDGFESNEGVI 296
Query: 474 VLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIA 533
++ ATNR DVLD AL RPGRFDR V + PD GRE I+ VH+ K++P A D+++ IA
Sbjct: 297 IIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVHI--KKVPTAPDVNIRTIA 354
Query: 534 SMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAV 593
T GF+G RLNK +V DF +A ++ + G E+K+ + E+ +
Sbjct: 355 RGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEYARDKVMMGAERKSLMMTEEERRL 414
Query: 594 VARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGR 653
A HEAGHA++ + P + K +I+PR G +LG DR +++
Sbjct: 415 TAYHEAGHAIIAFFTEASDP----IHKATIIPR-GRSLGLVMRLPESDRVSHTREKMIAD 469
Query: 654 LVTLLGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPV 703
L +GGRAAEE+ + ++++GA DI++ATD+A + ++G++ +GP+
Sbjct: 470 LTVAMGGRAAEELIFGYHKVTSGASSDIKQATDLAKAMVMKWGMSDKVGPL 520
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 217/531 (40%), Positives = 310/531 (58%)
Query: 181 VSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDG--SIQESEV-ITNKFQESESLLKSV 237
V+ Y F KI + K+ + K+ N+ SI E IT K ++
Sbjct: 18 VAAAYVQFNDKIINGNTIKLPFS--EFLNKIDNNEVESINIGEHNITGKLKDGSKF---- 71
Query: 238 TPTKRIVYTTTRPSDIKTPYEKMLENQVEFGS-PDKRSGGFLNSALIALFYVAVLAGLLH 296
T IVY + IKT + + QV F P+ G L++ L++ F + +L +
Sbjct: 72 -QTTAIVYDSL----IKTLHNQ----QVTFTFLPEDTFFGVLSNILVSWFPMLLLVIIWF 122
Query: 297 RFPVSFSQTAGQ--VGHRKTRGPGGAKV-SEQGDTITFADVAGVDEAKEELEEIVEFLRS 353
F + Q G + K+R AK+ +E + +TF DVAG+DEAKEEL EIV+FL+
Sbjct: 123 IF-LKRMQIGGNRTINFSKSR----AKLMTENRNKVTFNDVAGIDEAKEELIEIVDFLKH 177
Query: 354 PDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRV 413
++ +LG + P+G LL+G PGTGKTLLA+A+AGEA VPF S S S+FVE++VG+GASRV
Sbjct: 178 RQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRV 237
Query: 414 RDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVI 473
RD+F + KK AP IIFIDEIDAV + R G NDEREQTLNQLL EMDGF+SN VI
Sbjct: 238 RDMFEQGKKNAPCIIFIDEIDAVGRHR-GIGLGGGNDEREQTLNQLLVEMDGFESNEGVI 296
Query: 474 VLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIA 533
++ ATNR DVLD AL RPGRFDR V + PD GRE I+ VH+ K++P A D+++ IA
Sbjct: 297 IIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVHI--KKVPTAPDVNIRTIA 354
Query: 534 SMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAV 593
T GF+G RLNK +V DF +A ++ + G E+K+ + E+ +
Sbjct: 355 RGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEYARDKVMMGAERKSLMMTEEERRL 414
Query: 594 VARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGR 653
A HEAGHA++ + P + K +I+PR G +LG DR +++
Sbjct: 415 TAYHEAGHAIIAFFTEASDP----IHKATIIPR-GRSLGLVMRLPESDRVSHTREKMIAD 469
Query: 654 LVTLLGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPV 703
L +GGRAAEE+ + ++++GA DI++ATD+A + ++G++ +GP+
Sbjct: 470 LTVAMGGRAAEELIFGYHKVTSGASSDIKQATDLAKAMVMKWGMSDKVGPL 520
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 195/395 (49%), Positives = 259/395 (65%)
Query: 316 GPGGAKV-SEQGDT-ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGL 373
G AK+ + + D I FADVAGVDEAKEE+ E V+FL++P Y RLGA+ PRG +L G
Sbjct: 278 GKSRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAILSGP 337
Query: 374 PGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEI 433
PGTGKTLLAKA AGEA VPF+S S SEF+E++VG+G SRVRDLFA A+K AP IIFIDEI
Sbjct: 338 PGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEI 397
Query: 434 DAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGR 493
DA+ K+R + SNDERE TLNQLL EMDGF S+ ++V TNR DVLDPAL RPGR
Sbjct: 398 DAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGR 457
Query: 494 FDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDL--GDIASMTTGFTGXXXXXXXXXX 551
FDR + ++ PD GRE I KVH+ K + A +IDL +A +T+GFTG
Sbjct: 458 FDRQITIDRPDIGGREQIFKVHL--KHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEG 515
Query: 552 XXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASL 611
R N V+ + F A+ER AG+EKK+ L EK VA HEAGHAV G + +
Sbjct: 516 ALIAARSNSNEVQMVHFEQAIERVTAGLEKKSRVLSPEEKNTVAHHEAGHAVAGWFMEYV 575
Query: 612 LPGQPRVEKLSILPRTGGALGF-TYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSG 670
P + K+SI+PR ALG+ +Y P +D+YL+ ++ ++ L GR +EE+ +
Sbjct: 576 DP----LLKVSIIPRAQ-ALGYASYLP--KDQYLMSRGQILDQMGMALAGRVSEEIFFGP 628
Query: 671 -RISTGALDDIRRATDMAYKAIAEYGLNRTIGPVS 704
+I++GA DD ++ T MA + +YG++ T+G ++
Sbjct: 629 EKITSGASDDFQKVTRMAQAYVTQYGMSPTVGTIA 663
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 198/448 (44%), Positives = 272/448 (60%)
Query: 261 LENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGA 320
+EN++ + G FL S L + + L L R P + +G + G A
Sbjct: 237 VENRLPVVYSTESDGSFLLSLLPTILIIGSLLYTLRRGPAGLGRGGRGMGGLFSVGETTA 296
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
KV + + F DVAG +EAK E+ E V FL++P +Y LGA+ P+G +L G PGTGKTL
Sbjct: 297 KVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTL 356
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LAKA AGEA VPFI+ + SEF+E++VG+G +RVRDLFA A+K AP I+FIDEIDAV + R
Sbjct: 357 LAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR 416
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
GR E+E TLNQLL EMDGF++ + V++L TNR D+LDPAL RPGRFDR + +
Sbjct: 417 -GRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYI 475
Query: 501 ETPDKIGREAILKVHVS--KKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR- 557
PD GR +I KVH+ K + L KD +AS+T GF+G R
Sbjct: 476 GPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARH 535
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPR 617
L+ + +K F A+ER I G+EKKT L+ EK VA HEAGHAV G + P
Sbjct: 536 LSDAINQK-HFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADP---- 590
Query: 618 VEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGA 676
+ K+SI+PR G LG+ Y P +++YL ++L R+ LGGR +E++ + GRI+TGA
Sbjct: 591 LLKVSIIPR-GKGLGYAQYLP--KEQYLYTKEQLLDRMCMTLGGRVSEQIFF-GRITTGA 646
Query: 677 LDDIRRATDMAYKAIAEYGLNRTIGPVS 704
DD+++ T AY I ++G+N +G +S
Sbjct: 647 QDDLKKVTQSAYAQIVQFGMNEKVGQIS 674
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 198/448 (44%), Positives = 272/448 (60%)
Query: 261 LENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGA 320
+EN++ + G FL S L + + L L R P + +G + G A
Sbjct: 81 VENRLPVVYSTESDGSFLLSLLPTILIIGSLLYTLRRGPAGLGRGGRGMGGLFSVGETTA 140
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
KV + + F DVAG +EAK E+ E V FL++P +Y LGA+ P+G +L G PGTGKTL
Sbjct: 141 KVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTL 200
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LAKA AGEA VPFI+ + SEF+E++VG+G +RVRDLFA A+K AP I+FIDEIDAV + R
Sbjct: 201 LAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR 260
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
GR E+E TLNQLL EMDGF++ + V++L TNR D+LDPAL RPGRFDR + +
Sbjct: 261 -GRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYI 319
Query: 501 ETPDKIGREAILKVHVS--KKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR- 557
PD GR +I KVH+ K + L KD +AS+T GF+G R
Sbjct: 320 GPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARH 379
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPR 617
L+ + +K F A+ER I G+EKKT L+ EK VA HEAGHAV G + P
Sbjct: 380 LSDAINQK-HFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADP---- 434
Query: 618 VEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGA 676
+ K+SI+PR G LG+ Y P +++YL ++L R+ LGGR +E++ + GRI+TGA
Sbjct: 435 LLKVSIIPR-GKGLGYAQYLP--KEQYLYTKEQLLDRMCMTLGGRVSEQIFF-GRITTGA 490
Query: 677 LDDIRRATDMAYKAIAEYGLNRTIGPVS 704
DD+++ T AY I ++G+N +G +S
Sbjct: 491 QDDLKKVTQSAYAQIVQFGMNEKVGQIS 518
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 204/425 (48%), Positives = 266/425 (62%)
Query: 282 LIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAK 341
+I ++++A + G+ + P S + G K P AKV +TF DVAG++ K
Sbjct: 133 IIGVWWLA-MRGMRGQGPTSVMGNFSKSG-AKMYTPS-AKVK-----VTFDDVAGMENPK 184
Query: 342 EELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEF 401
EL+EIV++LR P K+ R+G + P+GVLLVG PGTGKTLLA+AVAGEA+V F+S SAS+F
Sbjct: 185 MELKEIVDYLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGEADVTFLSISASQF 244
Query: 402 VELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLT 461
+E++VG+GA RVRDLFA AKK APSIIFIDE+DAV +SR G +DEREQTLNQLL+
Sbjct: 245 IEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSR-GAGLGGGHDEREQTLNQLLS 303
Query: 462 EMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKEL 521
EMDGFDS+ VIV+ ATNR DVLDPAL RPGRFDR V+++ PD RE IL VH K +
Sbjct: 304 EMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRDREKILHVHTRK--I 361
Query: 522 PLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEK 581
PL KD+DL IA T G G R N V A ++ + G E+
Sbjct: 362 PLDKDVDLAVIARGTPGMAGADLENLVNEAAILAARENAATVTMEHMERAKDKVLMGGER 421
Query: 582 KTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANED 641
K + EK + A HEAGH T VA LLPG V K++I+PR G ALG T +D
Sbjct: 422 KMF-ITEQEKRITAYHEAGH----TIVAKLLPGTDPVHKVTIIPR-GQALGVTQQLPEDD 475
Query: 642 RYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIG 701
RY L RL LGGR AE + G +STGA +D++ D+A K + ++G++ IG
Sbjct: 476 RYHYPKSYLMNRLSVALGGRQAERAVF-GDLSTGAQNDLKMVNDLAEKMVCQWGMSDKIG 534
Query: 702 PVSIA 706
++ +
Sbjct: 535 AMTFS 539
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 214/542 (39%), Positives = 311/542 (57%)
Query: 178 TTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQE---SESLL 234
T S+ S L +SN ++ + KN +++ VI N E +E+
Sbjct: 213 TLVFSLATSLILGMGSSNDDTEINFQSFVTDYLTKN--LVKKVTVINNSVVEVELNENGA 270
Query: 235 KSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGG--FLNSALIALFYVAVLA 292
KR+ +T +++ + E Q ++ P + + +A F + L
Sbjct: 271 SQHNQQKRLYFTI---GSVESFERNLREAQDKYDIPPQLRVPIHYTTKGNMARFLINFLP 327
Query: 293 GLLHRFPVSF--SQTAGQVGHRKTRGPGGA---KVSEQGDT-ITFADVAGVDEAKEELEE 346
LL + + + A +G G G + K +++ D I F DVAG+ EAK+E+ E
Sbjct: 328 TLLFLGAIYWMTKKAASSMGGMGPMGFGKSTAKKFNQETDVKIKFKDVAGMAEAKQEVME 387
Query: 347 IVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYV 406
V+FL++P+KY +LGA+ PRG +L G PGTGKTLLAKA AGEA VPF S S SEFVE++V
Sbjct: 388 FVKFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYSVSGSEFVEMFV 447
Query: 407 GMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGF 466
G+GASRVRDLF A++ APSI+F+DEIDA+ K R +NDERE TLNQLL EMDGF
Sbjct: 448 GVGASRVRDLFKTARENAPSIVFVDEIDAIGKQRSKGNATGANDERETTLNQLLVEMDGF 507
Query: 467 DSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKD 526
D++ V+VL TNR D+LD AL RPGRFDR V ++ P+ +GR+ I VH+ K + L KD
Sbjct: 508 DTSDHVVVLAGTNRPDILDRALMRPGRFDRHVHIDNPELLGRKEIFDVHLQK--ITLQKD 565
Query: 527 ID---LGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKT 583
ID G +A++T GF+G R N V F A+ER I G+EKK+
Sbjct: 566 IDPDLSGRLAALTPGFSGADIANVCNEAALIAARYNAEFVTLRHFELAIERVIGGVEKKS 625
Query: 584 AKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDR 642
L E+ +VA HEAGHA+ G + P + K+SI+PR GALG+ Y P D+
Sbjct: 626 KLLNPEEQKIVAYHEAGHAICGWYLKYAHP----LLKVSIIPRGQGALGYAQYLPP--DQ 679
Query: 643 YLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGP 702
YL+ +L R++ LGGR +EE+ ++ +++GA DD ++ T +A + +G+++T+G
Sbjct: 680 YLMSTLQLYDRMIMTLGGRVSEELHFAS-VTSGAHDDFKKVTGIAQSMVLRFGMSKTVGM 738
Query: 703 VS 704
V+
Sbjct: 739 VN 740
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 200/447 (44%), Positives = 270/447 (60%)
Query: 263 NQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKV 322
NQ + G FL S + L + + + R P+ + G+ G G AK+
Sbjct: 235 NQTAVVYTTESDGTFLRSLVPTLLLIGIFLYAMRRGPMGAGR-GGRGGRLFGIGETIAKI 293
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
+ + FADVAG +EAK E+ E V FL++P +Y LGA+ P+G LL G PGTGKTLLA
Sbjct: 294 IKDDIGVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLA 353
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KA AGEA VPFI+ + SEF+E++VG+G +RVRD+FA A+K AP I+F+DEIDA+ + R G
Sbjct: 354 KATAGEAGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIGRKR-G 412
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
R E+E TLNQLL EMDGF+S + V+VL TNR DVLDPAL RPGRFDR + +
Sbjct: 413 RGHFGGQSEQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYIGP 472
Query: 503 PDKIGREAILKVHVSKKELP--LAKDIDLGDIASMTTGFTGXXXXXXXX---XXXXXXGR 557
PD GR +I +VH+ +L L+KD +A++T GFTG
Sbjct: 473 PDIKGRSSIFRVHLRPLKLDESLSKDALARKLAALTPGFTGSGADISNVCNEAALIAARH 532
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPR 617
LN V EK F A+ER I G+EKKT L+ EK VA HEAGHAVVG + P
Sbjct: 533 LNPSVGEK-HFEQAIERVIGGLEKKTQVLQPGEKMTVAYHEAGHAVVGWFLEHADP---- 587
Query: 618 VEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGAL 677
+ K+SI+PR G LG+ E +YL ++L R+ +LGGR AE++ + GR++TGA
Sbjct: 588 LLKVSIVPR-GKGLGYAQCLPRE-QYLYTREQLFDRMCAMLGGRVAEQLFF-GRVTTGAQ 644
Query: 678 DDIRRATDMAYKAIAEYGLNRTIGPVS 704
DD+R+ T AY I ++G++ +G VS
Sbjct: 645 DDLRKVTQSAYAQIVQFGMSEKLGQVS 671
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 190/394 (48%), Positives = 253/394 (64%)
Query: 320 AKVSEQGDT-ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGK 378
AK++ + + F DVAG +EAK E+ E V FL++P +YI LGA+ P+G +L G PGTGK
Sbjct: 315 AKLTNPNEIGVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGK 374
Query: 379 TLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAK 438
TLLAKA AGEA VPFI+ S SEF+E++VG+G SRVRD+FA A+K AP I+FIDEIDAV +
Sbjct: 375 TLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGR 434
Query: 439 SRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVV 498
R G+ + E+E TLNQLL EMDGF++ + V+VL ATNR D+LD AL RPGRFDR +
Sbjct: 435 KRGGK-TFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQI 493
Query: 499 MVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
V PD GR +I KVH+ + L K+ +A++T GFTG R
Sbjct: 494 YVPAPDIKGRASIFKVHLGNLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARD 553
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRV 618
+K + F A+ER IAG+EKKT L EK VA HEAGHAV G + P +
Sbjct: 554 SKDSIVLKHFEQAIERVIAGMEKKTNVLAPEEKRTVAHHEAGHAVAGWFLEHADP----L 609
Query: 619 EKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGAL 677
K+SI+PR G LG+ Y P +D YLL ++L R+ LGGR AEE+ ++ RI+TGA
Sbjct: 610 LKVSIIPR-GKGLGYAQYLP--KDHYLLSKEQLFDRMCMTLGGRVAEELFFN-RITTGAQ 665
Query: 678 DDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSG 711
DD+++ TD+AY + +G+N +G VS +G
Sbjct: 666 DDLKKITDIAYSQVVRFGMNEKVGQVSFDVGQAG 699
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
Identities = 198/447 (44%), Positives = 269/447 (60%)
Query: 262 ENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAK 321
EN++ + G FL S L + + L +L R P + +G + AK
Sbjct: 233 ENRLPVVYSAESDGSFLLSMLPTVLIIGFLLFMLRRGPAGAGRPGRGMGGLFSVSETTAK 292
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
V + F DVAG +EAK E+ E V FL++P +Y LGA+ P+G +L G PGTGKTLL
Sbjct: 293 VLRDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLL 352
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKA AGEA VPFI+ + SEF+E++VG+G +RVRDLF A+K AP I+FIDEIDAV + R
Sbjct: 353 AKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKR- 411
Query: 442 GRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
GR E+E TLNQLL EMDGF++ + V+VL TNR D+LDPAL RPGRFDR + +
Sbjct: 412 GRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIG 471
Query: 502 TPDKIGREAILKVHVS--KKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR-L 558
PD GR +I KVH+ K E L K+ +A++T GF+G R L
Sbjct: 472 PPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIAARHL 531
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRV 618
+ + +K F A+ER I G+EKKT L+ EK VA HEAGHAV G + P +
Sbjct: 532 SDAINQK-HFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADP----L 586
Query: 619 EKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGAL 677
K+SI+PR G LG+ Y P +++YL ++L R+ LGGR +EE+ + GRI+TGA
Sbjct: 587 LKVSIIPR-GKGLGYAQYLP--KEQYLYTKEQLLDRMCMTLGGRVSEEIFF-GRITTGAQ 642
Query: 678 DDIRRATDMAYKAIAEYGLNRTIGPVS 704
DD+++ T AY I ++G+N +G VS
Sbjct: 643 DDLKKVTQSAYAQIVQFGMNEKVGQVS 669
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 187/400 (46%), Positives = 257/400 (64%)
Query: 316 GPGGAKVSEQGDT-ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLP 374
G A+V + D + FADVAG +EAK E+ E V FL++P +Y LGA+ P+G +L G P
Sbjct: 276 GQSTARVINREDIKVKFADVAGCEEAKIEIMEFVNFLKNPQQYKDLGAKIPKGAILTGPP 335
Query: 375 GTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEID 434
GTGKTLLAKA AGEA VPFI+ S SEF+E++VG+G +RVRD+F+ A+K +P I+FIDEID
Sbjct: 336 GTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEID 395
Query: 435 AVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSN-SAVIVLGATNRSDVLDPALRRPGR 493
AV + R G+ + + E+E TLNQLL EMDGF ++ S+VIV+ ATNR D+LD AL RPGR
Sbjct: 396 AVGRKRGGKGGMGGHSEQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPGR 455
Query: 494 FDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXX 553
FDR + V PD GR +I +VH+ L K + +A+ T GF+G
Sbjct: 456 FDRQIYVPVPDIKGRASIFRVHLGPLRTSLDKTVLSRKLAAHTPGFSGADISNVCNEAAL 515
Query: 554 XXGR-LNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLL 612
R N + K F A+ER +AG+EKKT L+ EK VA HEAGHA+ G +
Sbjct: 516 IAARDANHEISNK-HFEQAIERVVAGMEKKTQVLQKEEKKTVAYHEAGHAIAGWFLQHAD 574
Query: 613 PGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGR 671
P + K+SI+PR G LG+ Y P +++YL D+L R+ LGGR AEE+ + GR
Sbjct: 575 P----LLKVSIIPR-GKGLGYAQYLP--KEQYLYSKDQLLDRMCMTLGGRVAEEIFF-GR 626
Query: 672 ISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSG 711
I+TGA DD+++ T MAY + ++G++ +GP+S T + G
Sbjct: 627 ITTGAQDDLQKVTQMAYSQVVKFGMSEKVGPLSFETPAPG 666
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 196/407 (48%), Positives = 258/407 (63%)
Query: 307 GQVGHRKTRGPGGAKV-SEQGDT-ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARP 364
G +G G AK+ +++ D I+F +VAG DEAK+E+ E V FL++P KY +LGA+
Sbjct: 261 GGLGGMFNVGKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKI 320
Query: 365 PRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEA 424
PRG +L G PGTGKTLLAKA AGEA VPF+S S SEFVE++VG+GASRVRDLF +A+ A
Sbjct: 321 PRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMA 380
Query: 425 PSIIFIDEIDAVAKSRD-GRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDV 483
PSIIFIDEIDA+ K R G +NDERE TLNQLL EMDGF ++ V+VL TNR DV
Sbjct: 381 PSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDV 440
Query: 484 LDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKEL-PLAKDIDL----GDIASMTTG 538
LD AL RPGRFDR + +++PD GR+ I VH+ + L PL D D+ G +A++T G
Sbjct: 441 LDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTD-DMNNLSGKLATLTPG 499
Query: 539 FTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHE 598
FTG R N + F A+ER IAG+EKKT L EK VA HE
Sbjct: 500 FTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRVLSKEEKRSVAYHE 559
Query: 599 AGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTL 657
AGHAV G + P + K+SI+PR GALG+ Y P D+YL+ ++ R++
Sbjct: 560 AGHAVCGWFLKYADP----LLKVSIIPRGQGALGYAQYLPP--DQYLISEEQFRHRMIMA 613
Query: 658 LGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVS 704
LGGR +EE+ + +++GA DD ++ T MA + G++ IG +S
Sbjct: 614 LGGRVSEELHFPS-VTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLS 659
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 185/411 (45%), Positives = 256/411 (62%)
Query: 291 LAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDT-ITFADVAGVDEAKEELEEIVE 349
+ GL + + S +AG+ G + + + D I F+DVAG+DEAK E+ E V
Sbjct: 360 MGGLFYLSRRAGSASAGRNGIFGIGKSRARRFNHETDVKIKFSDVAGMDEAKVEIMEFVS 419
Query: 350 FLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMG 409
FL+SP+++ +LGA+ PRG +L G PGTGKTLLAKA AGE+ VPF S S SEFVE++VG+G
Sbjct: 420 FLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGESGVPFFSVSGSEFVEMFVGVG 479
Query: 410 ASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSN 469
SRVRDLFA A+K P IIFIDEIDA+ KSR + NDERE TLNQ+LTEMDGF+++
Sbjct: 480 PSRVRDLFANARKNTPCIIFIDEIDAIGKSRSAKNFSGGNDERESTLNQILTEMDGFNTS 539
Query: 470 SAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDL 529
V+VL TNR DVLD AL RPGRFDR + ++ P GR+ I +VH+ K++ +D+D
Sbjct: 540 DQVVVLAGTNRPDVLDKALMRPGRFDRHISIDRPTMDGRKQIFRVHL--KKIVTKEDMDY 597
Query: 530 --GDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLK 587
G ++++T GF G R N V F A+ER + G+EKK+ L
Sbjct: 598 LTGRLSALTPGFAGADIANCVNEAALVAARENAESVTMKHFERAIERVVGGLEKKSLVLS 657
Query: 588 GSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLF 646
EK VA HEAGHA+ G P + K+SI+PR GALG+ Y PAN D YL+
Sbjct: 658 PEEKRTVAYHEAGHAICGWYFRWADP----LLKVSIIPRGQGALGYAQYLPANGDTYLMT 713
Query: 647 IDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLN 697
+++ R+ LGGR +EE+ + +++GA DD + T +A + ++G++
Sbjct: 714 ANQMMDRMAMTLGGRVSEELHFD-TVTSGASDDFNKVTRLATAMVTKFGMS 763
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 204/474 (43%), Positives = 275/474 (58%)
Query: 244 VYTTT--RPSDIKTPYEKMLENQVEFGSP-DKRSGGFLNSA------LIALFYVAVLAGL 294
V+T T P D + K+ E+Q G P +K+ N L+A+ ++ GL
Sbjct: 262 VHTITIISPEDFQ---RKLQEDQDALGIPLNKQVFATFNHTNKILRELVAISPTLLMIGL 318
Query: 295 LHRFP--VSFSQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLR 352
L F ++ S T G K++ +K + T TF DVAG+DEAKEE+ E V FL+
Sbjct: 319 LIYFSRGINSSLTKGASSLFKSK----SKAVKATSTTTFKDVAGMDEAKEEIMEFVSFLK 374
Query: 353 SPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASR 412
P +Y +LGAR P+G +L G PGTGKTLLAKA AGEA V F + S S+F+E++VG+G SR
Sbjct: 375 DPSRYKKLGARIPKGAILSGPPGTGKTLLAKATAGEAGVNFYTISGSDFIEMFVGVGPSR 434
Query: 413 VRDLFARAKKEAPSIIFIDEIDAVAKSRD-GRFRIVSNDEREQTLNQLLTEMDGFDSNSA 471
VRDLF A+ P I+FIDEIDAV ++R G F NDERE TLNQLL EMDGF S S
Sbjct: 435 VRDLFKEARANTPCIVFIDEIDAVGRARSRGGFH---NDERENTLNQLLVEMDGFSSTSG 491
Query: 472 VIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGD 531
V+V TNRSDVLDPAL RPGRFDR + V PD GR+ I VH+ +L +
Sbjct: 492 VVVFAGTNRSDVLDPALLRPGRFDRQIYVGKPDIKGRKDIFMVHLKNIKLDGEMEEIAKK 551
Query: 532 IASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEK 591
+A++T GF+G R + F A+ER + G++++ L E+
Sbjct: 552 LATLTPGFSGADIANVCNEGALVAARKDATSANFDHFEEAIERVLVGLKRENRVLSPEER 611
Query: 592 AVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFT-YTPANEDRYLLFIDEL 650
+VA HEAGHAVVG + P + K+SI+PR G LGF Y P +D+YL ++L
Sbjct: 612 TIVAHHEAGHAVVGWFLEHTDP----LLKVSIVPRGSGTLGFAQYQP--KDQYLYTREQL 665
Query: 651 CGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVS 704
R+ LGGR AE + + RISTGA+DD+ + T MA ++ YG++ +G S
Sbjct: 666 FDRICVSLGGRIAESIIFD-RISTGAMDDLDKVTKMASASVVNYGMSEKVGVAS 718
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 196/432 (45%), Positives = 258/432 (59%)
Query: 275 GGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAK---VSEQGDTITF 331
G L L+ + + +L GL V FS+ G G R G G ++ +S+ TF
Sbjct: 109 GSILGELLVYVLPLLLLVGLF----VMFSRMQG--GARMGFGFGKSRAKQLSKDMPKTTF 162
Query: 332 ADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEV 391
ADVAGVDEA EEL EI +FL++P +Y LGA+ P+GVLL G PGTGKTLLA+AVAGEA V
Sbjct: 163 ADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGV 222
Query: 392 PFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDE 451
PF + S S+FVE++VG+GASRVRDLF +AK+ +P IIF+DEIDAV + R G +DE
Sbjct: 223 PFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQR-GAGLGGGHDE 281
Query: 452 REQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAI 511
REQTLNQLL EMDGF + VI++ ATNR D+LDPAL RPGRFDR + V PD GR A+
Sbjct: 282 REQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAV 341
Query: 512 LKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHA 571
L+VH K P+A D DL +A T G TG R N V+ A
Sbjct: 342 LRVHSKGK--PMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEA 399
Query: 572 VERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGAL 631
V+R I G +K + EK + A HE GH + A+ + P + K++IL R G
Sbjct: 400 VDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEP----IYKVTILAR-GRTG 454
Query: 632 GFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAI 691
G ED+ L E+ +LV +GGRAAEE+ + +TGA+ DI +AT +A +
Sbjct: 455 GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFR-EPTTGAVSDIEQATKIARSMV 513
Query: 692 AEYGLNRTIGPV 703
E+G++ +G V
Sbjct: 514 TEFGMSSKLGAV 525
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 180/405 (44%), Positives = 259/405 (63%)
Query: 326 GDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAV 385
G + F DVAG+ EAK+E++E V++L+SP+KY RLGA+ PRG LL+G PG GKTLLAKAV
Sbjct: 335 GRGVLFRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAV 394
Query: 386 AGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFR 445
A EA+VPF+S + SEF+E+ G+GA+RVRDLF KK AP II+IDEIDA+ + R G
Sbjct: 395 ATEAQVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTES 454
Query: 446 IV--SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETP 503
+ S+ E EQTLNQLL EMDG + V++L +TNR+D+LD AL RPGRFDR ++++ P
Sbjct: 455 MGQGSSGESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLP 514
Query: 504 DKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVV 563
R+ I + H+S +L +A +T GF+G R ++ V
Sbjct: 515 TLAERKEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEV 574
Query: 564 EKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSI 623
+ +AVER + G EK++ L +E+ V+A HE+GHA+VG +LP + K++I
Sbjct: 575 SSKNLEYAVERLVGGTEKRSHALSLAERKVIAYHESGHALVGW----MLPNSDILLKVTI 630
Query: 624 LPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRR 682
+PRT ALGF YTP+ +++L +EL ++ LGGRAAE + ++ RI+TGA +D+ +
Sbjct: 631 VPRTSLALGFAQYTPS--EQHLYSKEELFDKMCMALGGRAAENLVFN-RITTGAQNDLEK 687
Query: 683 ATDMAYKAIAEYGLNRTIGPVSIATLSS---GGIDESGGGVPWGR 724
T +AY I ++G+N T+GP+ + GG SGG P+ R
Sbjct: 688 VTKIAYSQIKKFGMNDTLGPIYVRDADETEGGGAMGSGGKKPFSR 732
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 816 (292.3 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 181/384 (47%), Positives = 239/384 (62%)
Query: 329 ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
I F DVAG DEAK+E+ E V FL++P KY LGA+ P+G LLVG PGTGKTLLAKA AGE
Sbjct: 319 IYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 378
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVS 448
+ VPF+S S S+F+E++VG+G SRVR LF A++ APSIIFIDEIDA+ ++R GR +
Sbjct: 379 SGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRAR-GRGGLGG 437
Query: 449 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGR 508
NDERE TLNQLL EMDGF + + V+VL TNR D+LD AL RPGRFDR + ++ PD GR
Sbjct: 438 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 497
Query: 509 EAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDF 568
+ I K+++ K +L +A++T GF G R V F
Sbjct: 498 DQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHF 557
Query: 569 IHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTG 628
A++R I G+EKK + E+ VA HE+GHAVVG + P + K++I+PR
Sbjct: 558 ESAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEP----LLKVTIVPRGT 613
Query: 629 GALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMA 687
ALGF Y P NE+ L+ ++L LGGRAAE+V G+ISTGA +D+ + T M
Sbjct: 614 AALGFAQYVP-NEN-LLMTKEQLFDMTCMTLGGRAAEQVLI-GKISTGAQNDLEKVTKMT 670
Query: 688 YKAIAEYGLNRTIGPVSIATLSSG 711
Y +A YG + +G +S G
Sbjct: 671 YAQVAVYGFSDKVGLLSFPPRDDG 694
Score = 38 (18.4 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 331 FADVAGVDEAKEELEEIVEFL 351
+ ++ VD +E+LEE E L
Sbjct: 221 YFNIGSVDSFEEKLEEAQEAL 241
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 196/448 (43%), Positives = 264/448 (58%)
Query: 262 ENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAK 321
EN+V + G FL S L +A L + R P ++ +G + G AK
Sbjct: 29 ENRVPVVYIAESDGSFLLSMLPTALIIAFLLYTIRRGPAGIGRSGRGMGGLFSVGETTAK 88
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGAR-PPRGVLLVGLPGTGKTL 380
V + + F DVAG +EAK E+ E V FL++P +Y LGA+ P +G +L G PGTGKTL
Sbjct: 89 VLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKKGAILTGPPGTGKTL 148
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LAKA AGEA VPFI+ S SEF+E++VG+G +RVRDLFA A+K AP I+FIDEIDAV + R
Sbjct: 149 LAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR 208
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
GR E+E TLNQLL EMDGF++ + V++L TNR D+LDPAL RPGRFDR + +
Sbjct: 209 -GRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFI 267
Query: 501 ETPDKIGREAILKVHVS--KKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR- 557
PD GR +I KVH+ K + L K+ +AS+T GF+G R
Sbjct: 268 GPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARH 327
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPR 617
L+ + +K F A+ER I G+EKKT L+ EK VA HEAGHAV G + P
Sbjct: 328 LSDSINQK-HFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP---- 382
Query: 618 VEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGA 676
+ K+SI+PR G LG+ Y P +++YL ++L R+ G + GRI+TGA
Sbjct: 383 LLKVSIIPR-GKGLGYAQYLP--KEQYLYTKEQLLDRMCMTPGWPCGPRKSSFGRITTGA 439
Query: 677 LDDIRRATDMAYKAIAEYGLNRTIGPVS 704
DD R+ T AY I ++G+N +G +S
Sbjct: 440 QDD-RKVTQSAYAQIVQFGMNEKVGQIS 466
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 212/547 (38%), Positives = 307/547 (56%)
Query: 177 STTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKS 236
ST+ S+ ++DF++++ +AK EV V + + ES+V+ +
Sbjct: 159 STSGGSISWADFVNEM----LAKGEVQRVQV---------VPESDVVEVYLHPGAVVFGR 205
Query: 237 VTPTKRIVYTTTRPSDIKTPYEKM--LENQVEFGSPDK-----RSGGFLNSALIALFYVA 289
P ++Y + ++I EK+ E+++ S D+ + GF +AL AL A
Sbjct: 206 --PRLALMYRM-QVANIDKFEEKLRAAEDELNIESKDRIPVSYKRTGFFGNALYALGMTA 262
Query: 290 V-LAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVS----EQGDTITFADVAGVDEAKEEL 344
V LA L + F ++ T + G A+ + + G ++F DVAG+ EAK E+
Sbjct: 263 VGLAILWYVFRLA-GMTGREGGFSAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEV 321
Query: 345 EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVEL 404
E V++L+SP+++++LGA+ P+G LL+G PG GKTLLAKAVA EA+VPF++ + EFVE+
Sbjct: 322 REFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEV 381
Query: 405 YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMD 464
G+GA+RVR LF A+ AP I++IDEIDAV K R SN E EQTLNQLL EMD
Sbjct: 382 IGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMD 441
Query: 465 GFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLA 524
G + VIVL +TNR+DVLD AL RPGR DR V ++ P R I + H+ +L
Sbjct: 442 GMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQP 501
Query: 525 KDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTA 584
+A +T GF+G R V +F +AVER IAG KK+
Sbjct: 502 SSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFEYAVERVIAGTAKKSK 561
Query: 585 KLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYL 644
L E+ VVA HE+GHA+VG LL V K+SI PRT ALGF+ D+YL
Sbjct: 562 ILSKEEQRVVAFHESGHALVGW----LLEHTEAVMKVSIAPRTNAALGFSQM-LPRDQYL 616
Query: 645 LFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVS 704
++L R+ LGGRAAE +++S R+++GA DD+R+ T +AY + ++G+ +IGPVS
Sbjct: 617 FTKEQLFERMCMALGGRAAEAISFS-RVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVS 675
Query: 705 IATLSSG 711
G
Sbjct: 676 FPEAQEG 682
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 187/389 (48%), Positives = 248/389 (63%)
Query: 321 KVSEQGDT-ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
K + + D I F DVAG DEAKEE+ E V FL+ P +Y ++GA+ PRG +L G PGTGKT
Sbjct: 336 KFNTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGKT 395
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
LLAKA AGEA VPF S SEFVE++VG+GA+RVRDLF A++ APSI+FIDEIDA+ K+
Sbjct: 396 LLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKA 455
Query: 440 RD-GRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVV 498
R G F +NDERE TLNQ+L EMDGF V+VL TNR D+LD AL RPGRFDR +
Sbjct: 456 RQKGNFS-GANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHI 514
Query: 499 MVETPDKIGREAILKVHVSKKELPLAKDI-DLGD-IASMTTGFTGXXXXXXXXXXXXXXG 556
++ P+ GR+AI VH+ L LA +I DL + +A++T GF+G
Sbjct: 515 NIDKPELEGRKAIFAVHLH--HLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAA 572
Query: 557 RLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQP 616
R ++ V+ F A+ER I G+E+K+ L EK VVA HEAGHAV G + P
Sbjct: 573 RSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADP--- 629
Query: 617 RVEKLSILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTG 675
+ K+SI+PR GALG+ Y P D +LL +L R+ LGGR +EE+ + +++G
Sbjct: 630 -LLKVSIIPRGQGALGYAQYLPG--DIFLLTEQQLKDRMTMSLGGRVSEELHFPS-VTSG 685
Query: 676 ALDDIRRATDMAYKAIAEYGLNRTIGPVS 704
A DD ++ T MA + E G++ IG V+
Sbjct: 686 ASDDFKKVTSMATAMVTELGMSDKIGWVN 714
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 189/445 (42%), Positives = 265/445 (59%)
Query: 272 KRSGGFLNSALIALFYVAV-LAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVS----EQG 326
KR+G F +AL AL AV LA L + F ++ T + G A+ + + G
Sbjct: 246 KRTG-FFGNALYALGMTAVGLAILWYVFRLA-GMTGREGGFSAFNQLKMARFTIVDGKMG 303
Query: 327 DTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVA 386
++F DVAG+ EAK E++E V++L+SP+++++LGA+ P+G LL+G PG GKTLLAKAVA
Sbjct: 304 KGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVA 363
Query: 387 GEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRI 446
EA+VPF++ + EFVE+ G+GA+RVR LF A+ AP I++IDEIDAV K R
Sbjct: 364 TEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTAVSG 423
Query: 447 VSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKI 506
SN E EQTLNQLL EMDG + VIVL ATNR+D+LD AL RPGR DR V ++ P
Sbjct: 424 FSNTEEEQTLNQLLVEMDGMGTTDHVIVLAATNRADILDNALLRPGRLDRHVFIDLPTLQ 483
Query: 507 GREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKI 566
R+ I + H+ +L A +A +T GF+G R V
Sbjct: 484 ERKEIFEQHLKSLKLTRASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTAVHTS 543
Query: 567 DFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPR 626
+ +AVER +AG KK+ L E+ VVA HE+GHA+VG LL V K+SI PR
Sbjct: 544 NLDYAVERVVAGTAKKSKVLSKEEQKVVAFHESGHALVGW----LLEHTEAVMKVSITPR 599
Query: 627 TGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDM 686
T ALGF D++L ++L R+ LGGRA+E ++++ R+++GA DD+R+ T +
Sbjct: 600 TNAALGFAQM-LPRDQHLFTREQLFERMCMALGGRASESISFN-RVTSGAQDDLRKVTRI 657
Query: 687 AYKAIAEYGLNRTIGPVSIATLSSG 711
AY + ++G+ +IGPVS G
Sbjct: 658 AYSMVKQFGMAPSIGPVSFPEAQEG 682
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 187/445 (42%), Positives = 265/445 (59%)
Query: 272 KRSGGFLNSALIALFYVAV-LAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVS----EQG 326
KR+G F +AL AL AV LA L + F ++ T + G A+ + + G
Sbjct: 246 KRTG-FFGNALYALGMTAVGLAILWYVFRLA-GMTGREGGLSAFNQLKMARFTIVDGKMG 303
Query: 327 DTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVA 386
++F DVAG+ EAK E++E V++L+SP+++++LGA+ P+G LL+G PG GKTLLAKAVA
Sbjct: 304 KGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVA 363
Query: 387 GEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRI 446
EA+VPF++ + EFVE+ G+GA+RVR LF A+ AP I++IDEIDAV K R
Sbjct: 364 TEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSG 423
Query: 447 VSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKI 506
SN E EQTLNQLL EMDG + VIVL +TNR+D+LD AL RPGR DR V ++ P
Sbjct: 424 FSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALLRPGRLDRHVFIDLPTLQ 483
Query: 507 GREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKI 566
R I + H+ +L A +A +T GF+G R V
Sbjct: 484 ERREIFEHHLKSLKLTQASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTF 543
Query: 567 DFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPR 626
+F +AVER IAG KK+ L E+ VVA HE+GHA+VG LL V K+SI PR
Sbjct: 544 NFEYAVERVIAGTAKKSKILSKEEQKVVAFHESGHALVGW----LLEHTEAVMKVSIAPR 599
Query: 627 TGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDM 686
T ALGF D++L ++L R+ LGGR +E ++++ ++++GA DD+R+ T +
Sbjct: 600 TNAALGFAQM-LPRDQHLFTKEQLFERMCMALGGRVSETISFN-KVTSGAQDDLRKVTRI 657
Query: 687 AYKAIAEYGLNRTIGPVSIATLSSG 711
AY + ++G+ +IGP+S + G
Sbjct: 658 AYSMVKQFGMAPSIGPISFPEVQEG 682
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 179/378 (47%), Positives = 237/378 (62%)
Query: 329 ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
I F DVAG +EAK+E+ E V FL++P KY LGA+ P+G LLVG PGTGKTLLAKA AGE
Sbjct: 324 IYFKDVAGCEEAKQEIMEFVHFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 383
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD-GRFRIV 447
+ VPF+S S S+F+E++VG+G SRVR+LF A++ APSIIFIDEIDA+ ++R G F
Sbjct: 384 SAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFS-G 442
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
NDERE TLNQLL EMDGF + + V+VL TNR D+LD AL RPGRFDR + ++ PD G
Sbjct: 443 GNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 502
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R+ I ++++ K +L +A++T GF G R V
Sbjct: 503 RDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAH 562
Query: 568 FIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRT 627
F A++R I G+EKK + E+ VA HE+GHAV G + P + K++I+PR
Sbjct: 563 FDSAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEP----LLKVTIVPRG 618
Query: 628 GGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDM 686
ALGF Y P NE+ L+ ++L LGGRAAE+V GRISTGA +D+ + T M
Sbjct: 619 TAALGFAQYVP-NEN-LLMTKEQLFDMTCMTLGGRAAEQVLI-GRISTGAQNDLEKVTKM 675
Query: 687 AYKAIAEYGLNRTIGPVS 704
Y +A YG + IG +S
Sbjct: 676 TYAQVAVYGFSDKIGLLS 693
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 181/409 (44%), Positives = 247/409 (60%)
Query: 302 FSQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLG 361
F++T+G + + T + E+ + F+DV GVDEAKEELEEIV+FLR P + RLG
Sbjct: 238 FAETSG-LNNIMTNTTEQEPMEERAINVRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLG 296
Query: 362 ARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAK 421
+ PRGVLL G PGTGKT+LA+AVAGEA VPF S S+F E+YVG+GA RVR+LFA A+
Sbjct: 297 GKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAAR 356
Query: 422 KEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNS----AVIVLGA 477
K+APSIIFIDE+DA+ + R+ R QTLNQLL ++DGF N V+ +GA
Sbjct: 357 KQAPSIIFIDELDAIGQKRNAR----DAAHMRQTLNQLLVDLDGFSKNEDLAHPVVFIGA 412
Query: 478 TNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTT 537
TN + LDPAL RPGRFDR + V PD GR AIL H + +PL KD+DL IA T+
Sbjct: 413 TNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHT--RHVPLGKDVDLSIIARGTS 470
Query: 538 GFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARH 597
GF G + V D + +R + G E+K+A + K + A H
Sbjct: 471 GFAGADLANLINQAAVYASKNLSTAVSMRDLEWSKDRILMGAERKSAFITPENKLMTAYH 530
Query: 598 EAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTL 657
E GHA+V + + R K +I+PR G +LG T + + D+ +E L
Sbjct: 531 EGGHALVALFTKNAM----RPYKATIMPR-GSSLGMTISLPDMDKDSWTREEYLAMLDVT 585
Query: 658 LGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSI 705
+GGRAAEE+ Y +I++GA +DI +AT +A + + E+G++ IGPVS+
Sbjct: 586 MGGRAAEELLYGKDKITSGAHNDIDKATQVARRMVTEFGMSDRIGPVSL 634
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 184/437 (42%), Positives = 259/437 (59%)
Query: 272 KRSGGFLNSALIALFYVAVLAGLL---HRFPVSFSQTAGQVGHRKTRGPGGAKVS-EQGD 327
KR+G F +AL AL A+ +L R + G + + V + G
Sbjct: 237 KRTG-FFGNALYALGMAAIGVAILWYIFRLAGMGGRDGGFSAFNQLKMAKFTIVDGKSGK 295
Query: 328 TITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
++F DVAG+ EAK E++E V++L++PD+Y++LGA+ P+G LL+G PG GKTLLAKAVA
Sbjct: 296 GVSFKDVAGMREAKMEVKEFVDYLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVAT 355
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
EA+VPF++ + SEFVE+ G+GA+RVR LF A+ AP I++IDEIDAV K R
Sbjct: 356 EAQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTNMSGF 415
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
SN E EQTLNQLL EMDG + VIVL +TNR+D+LD AL RPGR DR + ++ P
Sbjct: 416 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTLQE 475
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R+ I + H+ +L D +A +T GF+G R ++
Sbjct: 476 RKEIFEQHLKILKLTQPADFYSLRLAELTPGFSGADIANICNEAALHAAREGFKSIDTFS 535
Query: 568 FIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRT 627
F +AVER IAG KK+ L E+ VVA HE+GHA+VG LL V K+SI PRT
Sbjct: 536 FEYAVERVIAGSVKKSKILSKEEQRVVAFHESGHALVGW----LLEHTEAVMKVSIAPRT 591
Query: 628 GGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMA 687
ALGF D++L ++L R+ LGGRA+E + ++ +++TGA DD+R+ T +A
Sbjct: 592 NAALGFAQI-LPRDQFLFTKEQLFERMCMALGGRASEAITFN-KVTTGAQDDLRKVTRVA 649
Query: 688 YKAIAEYGLNRTIGPVS 704
Y + +YG+ ++G VS
Sbjct: 650 YSMVKQYGMVDSVGQVS 666
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 197/512 (38%), Positives = 286/512 (55%)
Query: 210 KLKNDGSIQESEVITNKFQESESLLKSVTPTKRIVYT---TTRPSDIKTPYEKM--LENQ 264
++ + G +Q EV+ L TP ++ T T R ++I EK+ E++
Sbjct: 146 EMLSKGEVQRIEVVPESDIVEIYLHPGGTPHGQVNVTLLYTMRVANIDKFEEKLRAAEDE 205
Query: 265 VEFGSPDK-----RSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVG----HRKTR 315
+ ++ + GF + +I+L V +L + AG+ G + +
Sbjct: 206 LNIDERERIPVSYKHPGFYGNDVISLLVTLVAVSMLWSI-FRLIRVAGRAGGFNAFNQLK 264
Query: 316 GPGGAKVS-EQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLP 374
V + G I F DVAG+ EAK E++E V++L++PD+Y++LGA+ P+G LL+G P
Sbjct: 265 MARFTIVDGKSGKGIGFKDVAGMHEAKMEVKEFVDYLKNPDRYLQLGAKVPKGALLLGPP 324
Query: 375 GTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEID 434
G GKTLLAKAVA EA+VPF++ + SEFVE+ G+GA+RVR LF A+ AP I++IDEID
Sbjct: 325 GCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGLGAARVRSLFREAQARAPCIVYIDEID 384
Query: 435 AVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRF 494
AV K R +N E EQTLNQLL EMDG + VIVL +TNR+DVLD AL RPGR
Sbjct: 385 AVGKKRSTNVSGFANAEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRL 444
Query: 495 DRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGD--IASMTTGFTGXXXXXXXXXXX 552
DR + ++ P R I + H+ K L L +D +A +T GF+G
Sbjct: 445 DRHIFIDLPTLQERREIFEQHL--KGLKLIQDASFYSQHLAELTPGFSGADIANICNEAA 502
Query: 553 XXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLL 612
R ++ +F +AVER IAG K+ L E+ VVA HE+GHA+VG LL
Sbjct: 503 LHAAREGHKSIDTFNFEYAVERVIAGTAKRNKILSPEERKVVAFHESGHALVGW----LL 558
Query: 613 PGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRI 672
V K+SI PRT ALGF E +YL ++L R+ LGGR +E + ++ ++
Sbjct: 559 EHTEAVMKVSIAPRTNAALGFAQILPRE-QYLFTKEQLLERMCMALGGRVSEAITFN-KV 616
Query: 673 STGALDDIRRATDMAYKAIAEYGLNRTIGPVS 704
+TGA DD++R T +AY + +YG+ +IG +S
Sbjct: 617 TTGAQDDLKRVTKIAYSMVKQYGMVPSIGQIS 648
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 173/404 (42%), Positives = 246/404 (60%)
Query: 303 SQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGA 362
S G+V K + P KVS I F ++AG+DE+K EL E+V+F+++ +KY +GA
Sbjct: 123 SDNNGKVP-MKDQSPN--KVSPHFKPIRFEEIAGIDESKLELLEVVDFIKNREKYHEMGA 179
Query: 363 RPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKK 422
R P+GVLLVG PG+GKT+LA+AVA EA VP+I S EF+E+YVG GA R+R LFA A+
Sbjct: 180 RMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARS 239
Query: 423 EAPSIIFIDEIDAVAKSRD-GRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRS 481
APSI+FIDEIDA+ R G E +QTLNQLL EMDGF + ++V+GATNR
Sbjct: 240 VAPSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRI 299
Query: 482 DVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
D LD AL RPGRFDR+V V PD GR+ IL++++ K + L + D+ IA +T GF+G
Sbjct: 300 DTLDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDLKLE-DIEKIARLTPGFSG 358
Query: 542 XXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGH 601
R NK +V + A ++ G E+K+ + ++ + A HEAGH
Sbjct: 359 ADLENVVNEATILATRNNKSLVTINELYEARDKVSMGPERKSLRQSDHQRRITAYHEAGH 418
Query: 602 AVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGR 661
A+V L P + K +I+ R G ALG+ +DR+ F ++ +L +GGR
Sbjct: 419 AIVAYF---LQPKTDPIHKATIISR-GNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGR 474
Query: 662 AAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVS 704
AEE+ + S+GA DI RAT++AYK + E+G++ +GP++
Sbjct: 475 TAEEIVFGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLN 518
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 183/445 (41%), Positives = 263/445 (59%)
Query: 272 KRSGGFLNSALIALFYVAV-LAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVS----EQG 326
KR+G F +AL ++ AV LA L + F ++ T + G A+ + + G
Sbjct: 246 KRTG-FFGNALYSVGMTAVGLAILWYVFRLA-GMTGREGGFSAFNQLKMARFTIVDGKMG 303
Query: 327 DTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVA 386
++F DVAG+ EAK E+ E V++L+SP+++++LGA+ P+G LL+G PG GKTLLAKAVA
Sbjct: 304 KGVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVA 363
Query: 387 GEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRI 446
EA+VPF++ + EFVE+ G+GA+RVR LF A+ AP I++IDEIDAV K R
Sbjct: 364 TEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSG 423
Query: 447 VSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKI 506
SN E EQTLNQLL EMDG + VIVL +TNR+D+LD AL RPGR DR V ++ P
Sbjct: 424 FSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQ 483
Query: 507 GREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKI 566
R I + H+ +L + +A +T GF+G R V +
Sbjct: 484 ERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTL 543
Query: 567 DFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPR 626
+F +AVER +AG KK+ L E+ VVA HE+GHA+VG +L V K+SI PR
Sbjct: 544 NFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGW----MLEHTEAVMKVSITPR 599
Query: 627 TGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDM 686
T ALGF D++L ++L R+ LGGRA+E ++++ +++GA DD+R+ T +
Sbjct: 600 TNAALGFAQM-LPRDQHLFTKEQLFERMCMALGGRASEALSFN-EVTSGAQDDLRKVTRI 657
Query: 687 AYKAIAEYGLNRTIGPVSIATLSSG 711
AY + ++G+ IGP+S G
Sbjct: 658 AYSMVKQFGMAPGIGPISFPEAQEG 682
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 173/404 (42%), Positives = 246/404 (60%)
Query: 303 SQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGA 362
S G+V K + P KVS I F ++AG+DE+K EL E+V+F+++ +KY +GA
Sbjct: 123 SDNNGKVP-MKDQSPN--KVSPHFKPIRFEEIAGIDESKLELLEVVDFIKNREKYHEMGA 179
Query: 363 RPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKK 422
R P+GVLLVG PG+GKT+LA+AVA EA VP+I S EF+E+YVG GA R+R LFA A+
Sbjct: 180 RMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARS 239
Query: 423 EAPSIIFIDEIDAVAKSRD-GRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRS 481
APSI+FIDEIDA+ R G E +QTLNQLL EMDGF + ++V+GATNR
Sbjct: 240 VAPSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRI 299
Query: 482 DVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
D LD AL RPGRFDR+V V PD GR+ IL++++ K + L + D+ IA +T GF+G
Sbjct: 300 DTLDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDLKLE-DIEKIARLTPGFSG 358
Query: 542 XXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGH 601
R NK +V + A ++ G E+K+ + ++ + A HEAGH
Sbjct: 359 ADLENVVNEATILATRNNKSLVTINELYEARDKVSMGPERKSLRQSDHQRRITAYHEAGH 418
Query: 602 AVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGR 661
A+V L P + K +I+ R G ALG+ +DR+ F ++ +L +GGR
Sbjct: 419 AIVAYF---LQPKTDPIHKATIISR-GNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGR 474
Query: 662 AAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVS 704
AEE+ + S+GA DI RAT++AYK + E+G++ +GP++
Sbjct: 475 TAEEIVFGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLN 518
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 177/407 (43%), Positives = 249/407 (61%)
Query: 305 TAGQVGHRKTRGPG--GAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGA 362
T+G VG + P +++ + + TF DV G D+AK+ELEE+VE+L++P K+ RLG
Sbjct: 334 TSG-VGSSSSYSPKELNKEITPEKNVKTFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGG 392
Query: 363 RPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKK 422
+ P+G+LL G PGTGKTLLAKA+AGEA VPF + SEF E++VG+GA RVR LF AKK
Sbjct: 393 KLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKK 452
Query: 423 EAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSD 482
+AP IIFIDEIDAV +R ++TL+QLL EMDGF+ N +IV+ ATN D
Sbjct: 453 KAPCIIFIDEIDAVGSTRKQW-----EGHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPD 507
Query: 483 VLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGX 542
+LDPAL RPGRFDR ++V +PD GRE IL++++ K P+++D+D+ IA T GF G
Sbjct: 508 ILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGK--PMSEDVDVKAIARGTPGFNGA 565
Query: 543 XXXXXXXXXXXXXG--RLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAG 600
K+ E+++F A +R + G E+KT + K + A HE+G
Sbjct: 566 DLANLVNIAAIKAAVEGAEKLSSEQLEF--AKDRIVMGTERKTMFVSEDSKKLTAYHESG 623
Query: 601 HAVVGTAVASLLPGQPRVEKLSILPRTGGALGF-TYTPANEDRYLLFIDELCGRLVTLLG 659
HA+V P + K +I+PR G ALG T P+N D + +L RL +G
Sbjct: 624 HAIVALNTKGAHP----IHKATIMPR-GSALGMVTQLPSN-DETSVSKRQLLARLDVCMG 677
Query: 660 GRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSI 705
GR AEE+ + I+TGA D+ +AT++A ++ G++ IGPV I
Sbjct: 678 GRVAEELIFGLDHITTGASSDLSQATELAQYMVSSCGMSEAIGPVHI 724
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 551 (199.0 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 146/377 (38%), Positives = 215/377 (57%)
Query: 177 STTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKS 236
ST+ S+ ++DF++++ +AK EV V + + ES+V+ +
Sbjct: 159 STSGGSISWADFVNEM----LAKGEVQRVQV---------VPESDVVEVYLHPGAVVFGR 205
Query: 237 VTPTKRIVYTTTRPSDIKTPYEKM--LENQVEFGSPDK-----RSGGFLNSALIALFYVA 289
P ++Y + ++I EK+ E+++ S D+ + GF +AL AL A
Sbjct: 206 --PRLALMYRM-QVANIDKFEEKLRAAEDELNIESKDRIPVSYKRTGFFGNALYALGMTA 262
Query: 290 V-LAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVS----EQGDTITFADVAGVDEAKEEL 344
V LA L + F ++ T + G A+ + + G ++F DVAG+ EAK E+
Sbjct: 263 VGLAILWYVFRLA-GMTGREGGFSAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEV 321
Query: 345 EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVEL 404
E V++L+SP+++++LGA+ P+G LL+G PG GKTLLAKAVA EA+VPF++ + EFVE+
Sbjct: 322 REFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEV 381
Query: 405 YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMD 464
G+GA+RVR LF A+ AP I++IDEIDAV K R SN E EQTLNQLL EMD
Sbjct: 382 IGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMD 441
Query: 465 GFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLA 524
G + VIVL +TNR+DVLD AL RPGR DR V ++ P R I + H+ +L
Sbjct: 442 GMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQP 501
Query: 525 KDIDLGDIASMTTGFTG 541
+A +T GF+G
Sbjct: 502 SSFYSQRLAELTPGFSG 518
Score = 244 (91.0 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 57/135 (42%), Positives = 82/135 (60%)
Query: 577 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYT 636
+G KK+ L E+ VVA HE+GHA+VG LL V K+SI PRT ALGF+
Sbjct: 517 SGTAKKSKILSKEEQRVVAFHESGHALVGW----LLEHTEAVMKVSIAPRTNAALGFSQM 572
Query: 637 PANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGL 696
D+YL ++L R+ LGGRAAE +++S R+++GA DD+R+ T +AY + ++G+
Sbjct: 573 -LPRDQYLFTKEQLFERMCMALGGRAAEAISFS-RVTSGAQDDLRKVTRIAYSMVKQFGM 630
Query: 697 NRTIGPVSIATLSSG 711
+IGPVS G
Sbjct: 631 APSIGPVSFPEAQEG 645
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 551 (199.0 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 146/377 (38%), Positives = 215/377 (57%)
Query: 177 STTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKS 236
ST+ S+ ++DF++++ +AK EV V + + ES+V+ +
Sbjct: 159 STSGGSISWADFVNEM----LAKGEVQRVQV---------VPESDVVEVYLHPGAVVFGR 205
Query: 237 VTPTKRIVYTTTRPSDIKTPYEKM--LENQVEFGSPDK-----RSGGFLNSALIALFYVA 289
P ++Y + ++I EK+ E+++ S D+ + GF +AL AL A
Sbjct: 206 --PRLALMYRM-QVANIDKFEEKLRAAEDELNIESKDRIPVSYKRTGFFGNALYALGMTA 262
Query: 290 V-LAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVS----EQGDTITFADVAGVDEAKEEL 344
V LA L + F ++ T + G A+ + + G ++F DVAG+ EAK E+
Sbjct: 263 VGLAILWYVFRLA-GMTGREGGFSAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEV 321
Query: 345 EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVEL 404
E V++L+SP+++++LGA+ P+G LL+G PG GKTLLAKAVA EA+VPF++ + EFVE+
Sbjct: 322 REFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEV 381
Query: 405 YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMD 464
G+GA+RVR LF A+ AP I++IDEIDAV K R SN E EQTLNQLL EMD
Sbjct: 382 IGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMD 441
Query: 465 GFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLA 524
G + VIVL +TNR+DVLD AL RPGR DR V ++ P R I + H+ +L
Sbjct: 442 GMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQP 501
Query: 525 KDIDLGDIASMTTGFTG 541
+A +T GF+G
Sbjct: 502 SSFYSQRLAELTPGFSG 518
Score = 244 (91.0 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 57/135 (42%), Positives = 82/135 (60%)
Query: 577 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYT 636
+G KK+ L E+ VVA HE+GHA+VG LL V K+SI PRT ALGF+
Sbjct: 517 SGTAKKSKILSKEEQRVVAFHESGHALVGW----LLEHTEAVMKVSIAPRTNAALGFSQM 572
Query: 637 PANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGL 696
D+YL ++L R+ LGGRAAE +++S R+++GA DD+R+ T +AY + ++G+
Sbjct: 573 -LPRDQYLFTKEQLFERMCMALGGRAAEAISFS-RVTSGAQDDLRKVTRIAYSMVKQFGM 630
Query: 697 NRTIGPVSIATLSSG 711
+IGPVS G
Sbjct: 631 APSIGPVSFPEAQEG 645
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 174/384 (45%), Positives = 242/384 (63%)
Query: 329 ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
I F DVAG EAK E+ E V++L++P ++ +LGA+ PRG LL G PG GKTLLAKA+A E
Sbjct: 282 IKFKDVAGCSEAKVEIREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAE 341
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD------G 442
+ VPFIS + SEFVE+ G+GASR+R LF A+ AP II+IDEIDA+ + R G
Sbjct: 342 STVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGG 401
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
F S +E EQTLNQLL EMDG S + V+VL +TNR+DVLD AL RPGRFDR + ++
Sbjct: 402 GFGGGSGEE-EQTLNQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDL 460
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKV- 561
P + R+ + ++++ K +L A +A++T GFTG NK
Sbjct: 461 PTVLERKDMFELYMRKIKLDHAPQEYSQRLAALTPGFTGADIMNVCNESAIRAAS-NKCH 519
Query: 562 VVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKL 621
VV D +A++R +AG EK++ L E+ VVA HEAGHA+VG +L + K+
Sbjct: 520 VVTHKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGW----MLEHTDALLKV 575
Query: 622 SILPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDI 680
+I+PRT ALGF Y+P D++L DEL R+ +LGGR AE + + GR ++GA DD+
Sbjct: 576 TIIPRTSAALGFAQYSP--RDKHLFSKDELFDRMCMMLGGRCAENLKF-GRATSGAQDDL 632
Query: 681 RRATDMAYKAIAEYGLNRTIGPVS 704
++ T AY + YG++ +GP+S
Sbjct: 633 QKVTKSAYAQVKLYGMSSIVGPLS 656
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 189/453 (41%), Positives = 259/453 (57%)
Query: 269 SPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDT 328
S D G L + + V G+ F F+ + G V R G +V +
Sbjct: 242 SEDSPKSGKTMKYLKTIVVIVVFLGIFLSF---FTTSNGSV-FRIQLG-NQVEVDPEEIN 296
Query: 329 ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
+TF DV G DEAK+EL+E+VEFL+SP+K+ LG + P+GVLLVG PGTGKTLLA+AVAGE
Sbjct: 297 VTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGE 356
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVS 448
A+VPF + EF E+ VG GA RVRDLF AK AP +IFIDEID+V R V
Sbjct: 357 AKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKRTNS---VL 413
Query: 449 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGR 508
+ QT+NQLL+EMDGF N+ VIVLGATNR D LD AL RPGRFD VMV TPD GR
Sbjct: 414 HPYANQTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGR 473
Query: 509 EAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDF 568
+ IL ++++K L +IDL +A T+GFTG V
Sbjct: 474 KEILSLYLTKI---LHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHL 530
Query: 569 IHAVERSIAGIEKKTAKLKGSE-KAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRT 627
A ++ + G E+K A+L E + A HE GHA+V P + K++I+PR
Sbjct: 531 ETARDKVLMGPERK-ARLPDEEANTITAYHEGGHAIVAFYTKESHP----LHKVTIMPR- 584
Query: 628 GGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY-SGRISTGALDDIRRATD 685
G +LG T Y P E RY + +L + T++GGRAAEE+ + + +I++GA D+++AT
Sbjct: 585 GPSLGHTAYIPEKE-RYHVTKAQLLAMMDTMMGGRAAEELVFGTDKITSGASSDLKQATS 643
Query: 686 MAYKAIAEYGLNRTIGPVSIATLSSGGIDESGG 718
+A + ++G++ +G +I G ++ G
Sbjct: 644 IATHMVRDWGMSDKVGLRTIEASKGLGTGDTLG 676
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 169/386 (43%), Positives = 234/386 (60%)
Query: 321 KVSEQGDTIT-FADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V D+ T F+DV GVDEAK ELEEIV +LR P ++ RLG + P+GVLLVG PGTGKT
Sbjct: 215 EVQPSMDSSTKFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKT 274
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
+LA+A+AGEA VPF SCS SEF E++VG+GA RVRDLF+ AKK +P IIFIDEIDA+ S
Sbjct: 275 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGS 334
Query: 440 RDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
R+ + + TLNQ+L E+DGF N +IV+ ATN + LD AL RPGRFDR ++
Sbjct: 335 RNPK----DQQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIV 390
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
V PD GR IL+ H+SK + A+D+DL IA T GF+G
Sbjct: 391 VPNPDVEGRRQILESHMSK--VLKAEDVDLMIIARGTPGFSGADLANLVNVAALKAAMDG 448
Query: 560 KVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVE 619
V D A +R + G E+K+A + + + A HE GHA+V LP V
Sbjct: 449 SKDVTMSDLEFAKDRIMMGSERKSAVISDESRKLTAFHEGGHALVAIHTEGALP----VH 504
Query: 620 KLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYS-GRISTGALD 678
K +I+PR G ALG ++D + ++ RL +GGR AEE+ + +++GA
Sbjct: 505 KATIVPR-GMALGMVSQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGASS 563
Query: 679 DIRRATDMAYKAIAEYGLNRTIGPVS 704
D+ +AT +A + ++G+++ +G V+
Sbjct: 564 DLEQATKLARAMVTKFGMSKEVGLVA 589
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 711 (255.3 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 162/381 (42%), Positives = 226/381 (59%)
Query: 328 TITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
T+ F DV G DEA+ ELEEIV+FL+ P K+ LG + P+GVLL G PGTGKTLLA+A AG
Sbjct: 221 TVRFKDVQGCDEARAELEEIVDFLKDPSKFTGLGGKLPKGVLLTGPPGTGKTLLARATAG 280
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
EA VPF S SEF ELYVG+GA R+R+LF++A+ +AP+IIFIDE+DA+ R+ + +
Sbjct: 281 EAGVPFFFMSGSEFDELYVGVGAKRIRELFSQARDKAPAIIFIDELDAIGGKRNPKDQAY 340
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ +QTLNQLL E+DGF +I++GATN + LD AL RPGRFD+ V+V+ PD G
Sbjct: 341 A----KQTLNQLLVELDGFSQTEGIIIIGATNFPESLDKALTRPGRFDKEVIVDLPDVRG 396
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R ILK H+ E A D+D IA T G +G +L+ V+
Sbjct: 397 RIDILKHHMQNVET--ADDVDPSIIARGTPGLSGAELMNLVNQAAVHASQLSAPAVDMNH 454
Query: 568 FIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRT 627
F A ++ + G KK + + A HEAGHA++ A G + K +ILPR
Sbjct: 455 FEWAKDKILMGAAKKKMVITEESRINTAYHEAGHAIM----AMFSKGATPLYKATILPR- 509
Query: 628 GGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGR--ISTGALDDIRRATD 685
G ALG T+ D+ + E RL +GG+ AEE+ +G+ +++G D+ AT
Sbjct: 510 GRALGITFQLPEMDKVDMSKQECFARLDVCMGGKIAEEMI-NGKENVTSGCASDLSNATS 568
Query: 686 MAYKAIAEYGLNRTIGPVSIA 706
+A + YG++ IGPV ++
Sbjct: 569 VARAMVTSYGMSDKIGPVRLS 589
Score = 45 (20.9 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 58 NSQQKLS-LKRGLLYSNQNLREI 79
NS K++ + RG++YS ++R +
Sbjct: 2 NSLSKIAPISRGIIYSQSSIRSL 24
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 165/403 (40%), Positives = 246/403 (61%)
Query: 304 QTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGAR 363
+T G + + +GP + + T+ F+DV G DEAK+EL+E+VEFL +P+++ LG +
Sbjct: 289 ETTGVL--KNIKGPHSNEAQPEHQTVRFSDVHGCDEAKDELQELVEFLLNPERFSSLGGK 346
Query: 364 PPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKE 423
P+GVLLVG PGTGKTLLA+AVAGEA VPF S SEF E+YVG+GA RVR+LF +A+ +
Sbjct: 347 LPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSK 406
Query: 424 APSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDV 483
+P+IIFIDE+DA+ R+ R +QTLNQLLTE+DGF ++ VI+L ATN ++
Sbjct: 407 SPAIIFIDELDAIGAKRNERDAAYV----KQTLNQLLTELDGFSQSTGVIILAATNYPEL 462
Query: 484 LDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXX 543
LD AL RPGRFDR V+V+ PD GR ILK H+ K + ++ D+D+ IA T+GF+G
Sbjct: 463 LDKALTRPGRFDRKVVVDLPDVRGRMDILKHHM--KNVQISTDVDVAVIARGTSGFSGAD 520
Query: 544 XXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAV 603
R + V DF +A ++ I G E ++ ++ +K + A HEAGHA+
Sbjct: 521 LENLVNQAAIFASRNKQSKVTPKDFDYAKDKIIMGAEARSRIIQDKDKLLTAYHEAGHAL 580
Query: 604 VGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAA 663
V S +P + K++I+PR G +LG T+ D + + +GG+ A
Sbjct: 581 VAYFSPSSMP----LYKITIMPR-GMSLGSTHFLPEMDMVSKNYVQYLSDIDVSMGGKVA 635
Query: 664 EEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSI 705
EE+ Y ++++G D+ AT A+ + +G ++ +G V +
Sbjct: 636 EELIYGEDKVTSGISADLASATRTAFTLVTRFGYSKKLGNVDL 678
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 172/421 (40%), Positives = 239/421 (56%)
Query: 287 YVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEE 346
++ V L + F F K+ V + F DV G DEA+ ELEE
Sbjct: 236 WLLVFGILTYSFSEGFKYITENTTLLKSSEVADKSVDVAKTNVKFDDVCGCDEARAELEE 295
Query: 347 IVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYV 406
IV+FL+ P KY LG + P+GVLL G PGTGKTLLA+A AGEA V F S SEF E+YV
Sbjct: 296 IVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYV 355
Query: 407 GMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGF 466
G+GA R+RDLFA+A+ AP+IIFIDE+DA+ R+ + + + +QTLNQLL E+DGF
Sbjct: 356 GVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQAYA----KQTLNQLLVELDGF 411
Query: 467 DSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKD 526
S +I++GATN + LD AL RPGRFD+VV V+ PD GR ILK H+ K++ LA +
Sbjct: 412 SQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHM--KKITLADN 469
Query: 527 IDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+D IA T G +G + N V V+ F A ++ + G E+KT L
Sbjct: 470 VDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAERKTMVL 529
Query: 587 KGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLF 646
+ + A HEAGHA++ A G + K +ILPR G ALG T+ D+ +
Sbjct: 530 TDAARKATAFHEAGHAIM----AKYTNGATPLYKATILPR-GRALGITFQLPEMDKVDIT 584
Query: 647 IDELCGRLVTLLGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSI 705
E RL +GG+ AEE+ Y ++G D++ AT A + +YG++ +GPV++
Sbjct: 585 KRECQARLDVCMGGKIAEELIYGKDNTTSGCGSDLQSATGTARAMVTQYGMSDDVGPVNL 644
Query: 706 A 706
+
Sbjct: 645 S 645
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 698 (250.8 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 161/405 (39%), Positives = 232/405 (57%)
Query: 309 VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGV 368
V R T G A Q +TF V GV+EAK+EL+E+VEFL++P K+ LG + P+G+
Sbjct: 316 VRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGI 375
Query: 369 LLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSII 428
LLVG PGTGKTLLA+AVAGEA+VPF S SEF E++VG+GASR+R+LF AK AP +I
Sbjct: 376 LLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVI 435
Query: 429 FIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPAL 488
FIDE+D+V R + QT+NQLL EMDGF N VI++GATN + LD AL
Sbjct: 436 FIDELDSVGGKR---IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNAL 492
Query: 489 RRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXX 548
RPGRFD V V PD GR ILK +++K + + D ++ IA T GF+G
Sbjct: 493 IRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEI--IARGTVGFSGAELENLV 550
Query: 549 XXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAV 608
K +V + + ++ + G E+++ ++ K + A HE+GHA++
Sbjct: 551 NQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYT 610
Query: 609 ASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY 668
+P + K +I+PR G LG DR+ +L ++ +GGR AEE+ +
Sbjct: 611 KDAMP----INKATIMPR-GPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIF 665
Query: 669 -SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGG 712
+ I+TGA D AT +A + + ++G++ +G + T S G
Sbjct: 666 GTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG---VMTYSDTG 707
Score = 48 (22.0 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 185 YSDFLSKINSNQVAKVEV-DGVHIMF 209
+SDFL+K+N + K ++ +G MF
Sbjct: 59 FSDFLTKLNIVSIGKGKIFEGYRSMF 84
Score = 41 (19.5 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 181 VSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLK 235
V+VP S ++ ++ + V + GV + D + E E +++ S+ L K
Sbjct: 12 VTVPLSHLINAFHTPKNTSVSLSGVSVSQNQHRD-VVPEHEAPSSECMFSDFLTK 65
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 187/530 (35%), Positives = 292/530 (55%)
Query: 188 FLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVI-TNKFQESESLL---KSVTPTKRI 243
+ S I+ + +G + K+ N +++ T+ F+ +E++L + + TK +
Sbjct: 17 YASNISQKFTQNNQFNGAKNLNKISNT---PHNDIFSTSLFKRNENILSLNREFSTTKPL 73
Query: 244 VYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGG-----FLNSALIALFYVAVLAGLLHRF 298
+ R + I + +K L NQ + + + G + S L ++ V +++ F
Sbjct: 74 LSFRKRATSIFSGTDK-LNNQDQLNNNNLNVGQPIKVQVVQSKFKVLLFILVAGAIIYYF 132
Query: 299 PVSFSQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYI 358
S + G + T P V E+ +T TFADV G +EAK EL+++V+FLR+P+KY
Sbjct: 133 YSSKGKDKGGIMSILTSKPFKTLV-ERPNT-TFADVMGAEEAKGELQDLVDFLRNPEKYY 190
Query: 359 RLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFA 418
R P+G+LLVG PGTGKTLLAK++AGEA V FI+ + SEF E +VG+GA RVR+LF
Sbjct: 191 RRNIVMPKGILLVGPPGTGKTLLAKSLAGEARVSFITINGSEFEEAFVGVGAKRVRELFE 250
Query: 419 RAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGAT 478
A+K +P I+FIDEID+V SR R N + LNQLL E+DGFD V+V+ AT
Sbjct: 251 AARKNSPCIVFIDEIDSVGGSRTKRV----NYHPSEALNQLLVELDGFDGREGVMVMAAT 306
Query: 479 NRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTG 538
N D LD AL R GRFDR++ V PD R++I+ ++ K+ P+A ++ IA T G
Sbjct: 307 NYQDSLDTALIRSGRFDRIIQVPLPDGKARKSIIDHYL--KDKPIASHVNTTTIAQSTPG 364
Query: 539 FTGXXXXXXXXXXXXXXGRLN--KVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVAR 596
F+G + N ++ +E+++ +A E + G E+ + + + + A
Sbjct: 365 FSGADLFNLVNWAALETTKHNLPEITMEQLE--NAKENLMMGKERHSLLMSDEARKICAF 422
Query: 597 HEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVT 656
HEAGHA+V A + PG V K +I+PR G ALG E+ ++ +L ++
Sbjct: 423 HEAGHALV----AIMTPGARTVHKATIMPR-GDALGLVSMLEKEETFVTK-KQLIAQMDV 476
Query: 657 LLGGRAAEEVAYSGR-ISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSI 705
+GGRAAEE+ IS GA DI++AT +A ++ YG++ +G + I
Sbjct: 477 AMGGRAAEELILGKENISQGASSDIQKATSIAKAMVSNYGMSEKVGQIYI 526
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 702 (252.2 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 162/405 (40%), Positives = 231/405 (57%)
Query: 309 VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGV 368
V R T G A Q +TF V GV+EAK+EL+E+VEFL++P K+ LG + P+G+
Sbjct: 258 VRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGI 317
Query: 369 LLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSII 428
LLVG PGTGKTLLA+AVAGEA+VPF S SEF E++VG+GASR+R+LF AK AP +I
Sbjct: 318 LLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVI 377
Query: 429 FIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPAL 488
FIDE+D+V R + QT+NQLL EMDGF N VI++GATN + LD AL
Sbjct: 378 FIDELDSVGGKR---IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNAL 434
Query: 489 RRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXX 548
RPGRFD V V PD GR ILK +++K + K +D IA T GF+G
Sbjct: 435 IRPGRFDMQVTVPRPDVKGRTEILKWYLNK--IKFDKSVDPEIIARGTVGFSGAELENLV 492
Query: 549 XXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAV 608
K +V + + ++ + G E+++ ++ K + A HE+GHA++
Sbjct: 493 NQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYT 552
Query: 609 ASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY 668
+P + K +I+PR G LG DR+ +L ++ +GGR AEE+ +
Sbjct: 553 KDAMP----INKATIMPR-GPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIF 607
Query: 669 -SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGG 712
+ I+TGA D AT +A + + ++G++ +G + T S G
Sbjct: 608 GTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG---VMTYSDTG 649
Score = 41 (19.5 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 7/29 (24%), Positives = 19/29 (65%)
Query: 138 QPIIQAQEIGVLLLQLGIVMFVMRLLRPG 166
+P++ +++G+ L++G + ++ L PG
Sbjct: 55 EPVLNLRDLGLSELKIGQIDKMVENLLPG 83
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 702 (252.2 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 162/405 (40%), Positives = 231/405 (57%)
Query: 309 VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGV 368
V R T G A Q +TF V GV+EAK+EL+E+VEFL++P K+ LG + P+G+
Sbjct: 258 VRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGI 317
Query: 369 LLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSII 428
LLVG PGTGKTLLA+AVAGEA+VPF S SEF E++VG+GASR+R+LF AK AP +I
Sbjct: 318 LLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVI 377
Query: 429 FIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPAL 488
FIDE+D+V R + QT+NQLL EMDGF N VI++GATN + LD AL
Sbjct: 378 FIDELDSVGGKR---IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNAL 434
Query: 489 RRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXX 548
RPGRFD V V PD GR ILK +++K + K +D IA T GF+G
Sbjct: 435 IRPGRFDMQVTVPRPDVKGRTEILKWYLNK--IKFDKSVDPEIIARGTVGFSGAELENLV 492
Query: 549 XXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAV 608
K +V + + ++ + G E+++ ++ K + A HE+GHA++
Sbjct: 493 NQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYT 552
Query: 609 ASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY 668
+P + K +I+PR G LG DR+ +L ++ +GGR AEE+ +
Sbjct: 553 KDAMP----INKATIMPR-GPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIF 607
Query: 669 -SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGG 712
+ I+TGA D AT +A + + ++G++ +G + T S G
Sbjct: 608 GTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG---VMTYSDTG 649
Score = 41 (19.5 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 7/29 (24%), Positives = 19/29 (65%)
Query: 138 QPIIQAQEIGVLLLQLGIVMFVMRLLRPG 166
+P++ +++G+ L++G + ++ L PG
Sbjct: 55 EPVLNLRDLGLSELKIGQIDKLVENLLPG 83
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 697 (250.4 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 161/405 (39%), Positives = 230/405 (56%)
Query: 309 VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGV 368
V R T G A Q +TF V GV+EAK+EL+E+VEFL++P K+ LG + P+G+
Sbjct: 258 VRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGI 317
Query: 369 LLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSII 428
LLVG PGTGKTLLA+AVAGEA+VPF S SEF E++VG+GASR+R+LF AK AP +I
Sbjct: 318 LLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVI 377
Query: 429 FIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPAL 488
FIDE+D+V R + QT+ QLL EMDGF N VI++GATN + LD AL
Sbjct: 378 FIDELDSVGGKR---IEFPMHPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNAL 434
Query: 489 RRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXX 548
RPGRFD V V PD GR ILK +++K + K +D IA T GF+G
Sbjct: 435 IRPGRFDMQVTVPRPDVKGRTEILKWYLNK--IKFDKSVDPEIIARGTVGFSGAELENLV 492
Query: 549 XXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAV 608
K +V + + ++ + G E+++ ++ K + A HE+GHA++
Sbjct: 493 NQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYT 552
Query: 609 ASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY 668
+P + K +I+PR G LG DR+ +L ++ +GGR AEE+ +
Sbjct: 553 KDAMP----INKATIMPR-GPTLGHVSLLPENDRWNEIRAQLLAQMDVSMGGRVAEELIF 607
Query: 669 -SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGG 712
+ I+TGA D AT +A + + ++G++ +G + T S G
Sbjct: 608 GTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG---VMTYSDTG 649
Score = 41 (19.5 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 7/29 (24%), Positives = 19/29 (65%)
Query: 138 QPIIQAQEIGVLLLQLGIVMFVMRLLRPG 166
+P++ +++G+ L++G + ++ L PG
Sbjct: 55 EPVLNLRDLGLSELKIGQIDKLVENLLPG 83
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 698 (250.8 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 161/405 (39%), Positives = 232/405 (57%)
Query: 309 VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGV 368
V R T G A Q +TF V GV+EAK+EL+E+VEFL++P K+ LG + P+G+
Sbjct: 311 VRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGI 370
Query: 369 LLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSII 428
LLVG PGTGKTLLA+AVAGEA+VPF S SEF E++VG+GASR+R+LF AK AP +I
Sbjct: 371 LLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVI 430
Query: 429 FIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPAL 488
FIDE+D+V R + QT+NQLL EMDGF N VI++GATN + LD AL
Sbjct: 431 FIDELDSVGGKR---IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNAL 487
Query: 489 RRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXX 548
RPGRFD V V PD GR ILK +++K + + D ++ IA T GF+G
Sbjct: 488 IRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEI--IARGTVGFSGAELENLV 545
Query: 549 XXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAV 608
K +V + + ++ + G E+++ ++ K + A HE+GHA++
Sbjct: 546 NQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYT 605
Query: 609 ASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY 668
+P + K +I+PR G LG DR+ +L ++ +GGR AEE+ +
Sbjct: 606 KDAMP----INKATIMPR-GPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIF 660
Query: 669 -SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGG 712
+ I+TGA D AT +A + + ++G++ +G + T S G
Sbjct: 661 GTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG---VMTYSDTG 702
Score = 39 (18.8 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 139 PIIQAQEIGVLLLQLGIVMFVMRLLRPG 166
PI+ +++G+ L++G + ++ L PG
Sbjct: 109 PILNLRDLGLSELKIGQIDQLVDSLLPG 136
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 196/515 (38%), Positives = 268/515 (52%)
Query: 193 NSNQVAKVEVDGVHIMFKLKNDGSIQE-SEVITNKFQESESLLKSVTPTKRIVYTTTRPS 251
N+ + + EV F G Q+ SE K+ + ES LK + ++ YT
Sbjct: 119 NAGKPTQDEVKSPLTYFSELLAGKKQKTSEGGVEKWNQYESDLKKLPENQQRTYTD---G 175
Query: 252 DIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGH 311
+K +L N V D + L I L + L R V Q+G
Sbjct: 176 FVKG----LLSNGVSGAGKDGKKSNTLTRFYIFLVFCIFFGYLTGRIRVRVGDR--QIGS 229
Query: 312 RKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLV 371
P +V+ + +TF DV G+DEAK E+EEIV++L+ P+KY RLG R P+GVLLV
Sbjct: 230 LFFSNP--QEVNPEDVQVTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLV 287
Query: 372 GLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFID 431
G PGTGKTLLA+A+AGEA+VPF + SEF E+ VG GA RVRDLF +AK AP IIFID
Sbjct: 288 GPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFID 347
Query: 432 EIDAVAKSRDGRFRIVSNDER---EQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPAL 488
EID+V R VSN QT+NQLL+EMDGF N +IV+ ATNR D LD AL
Sbjct: 348 EIDSVGSKR------VSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKAL 401
Query: 489 RRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXX 548
RPGRFD V V PD GR I ++SK + + ID +A +TGFTG
Sbjct: 402 LRPGRFDVRVTVPKPDLAGRVDIFNFYLSK--IVHSGGIDPKVLAKGSTGFTGADIENMV 459
Query: 549 XXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSE-KAVVARHEAGHAVVGTA 607
N V V A +R + G + ++ E A HEAGH +V
Sbjct: 460 NQAALKAATDNAVEVTMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSLY 519
Query: 608 VASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVA 667
P + K++I+PR G +LG T +D Y L ++ L ++GGR AEE+
Sbjct: 520 TKDATP----LHKVTIIPR-GQSLGHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEELI 574
Query: 668 YSG-RISTGALDDIRRATDMAYKAIAEYGLNRTIG 701
+ +++TGA DD+ +AT +A + + +G++ +G
Sbjct: 575 FGDDKVTTGAADDLSKATQLAVQMVKVFGMSDKVG 609
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 180/525 (34%), Positives = 278/525 (52%)
Query: 188 FLSKINSNQVAKVEVDGVHIMF-KLKNDGSIQE--SEVITNKFQESESL--------LKS 236
+ +K+ + ++ D H M+ K +D + E S +N E ++ + S
Sbjct: 102 YTNKLKYTNLDNIKYDSDHNMYNKSMHDTTTNEMHSNERSNNIYEGNNVNSENNYNNMSS 161
Query: 237 VTPTKRIVYTTTRPSDIKTPYEKMLENQ--VEFGSPDKRSGGFLNSALIAL-FYVAVLAG 293
T ++ Y + + Y ++ + ++ D G N + F + V AG
Sbjct: 162 NHSTHKVEYMDKKRNQHPEMYSLHIDPKKPLKVSVIDSNKKGLWNLLKSTIGFLILVAAG 221
Query: 294 LLHRFPVSFSQTAG-QVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLR 352
++ VS + G V ++K + + +TFADV G DE K+ELEEI+++L+
Sbjct: 222 SVYMEGVSQNVQKGIGVSNKKI-------IPVENVKVTFADVKGCDEVKQELEEIIDYLK 274
Query: 353 SPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASR 412
+ DK+ ++GA+ P+G+LL G PGTGKTL+A+A+AGEA VPF+ S SEF E++VG+GA R
Sbjct: 275 NSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQASGSEFEEMFVGVGARR 334
Query: 413 VRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAV 472
+R+LF AKK AP I+FIDEIDAV R R N TLNQLL E+DGF+ N +
Sbjct: 335 IRELFQAAKKHAPCIVFIDEIDAVGSKRSSR----DNSAVRMTLNQLLVELDGFEQNEGI 390
Query: 473 IVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDI 532
+V+ ATN LD AL RPGR D+ ++V PD GR ILK++ +K + L+KD+DL +
Sbjct: 391 VVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKGRYEILKMYSNK--IVLSKDVDLHVL 448
Query: 533 ASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKA 592
+ T G TG K V+ A +R + G+++K+ L EK
Sbjct: 449 SRRTVGMTGADLNNILNIAAIKCSVEGKKSVDMNSIEQAFDRVVVGLQRKSP-LNEEEKN 507
Query: 593 VVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCG 652
+ A HE GH T V G V K +I+PR G +LG T+ D+Y I ++
Sbjct: 508 ITAYHEGGH----TLVNFYTKGSDPVHKATIMPR-GMSLGVTWKIPISDKYSQKIKDVQS 562
Query: 653 RLVTLLGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGL 696
+ L+GG +EE+ + ++TG D+++AT +A + YG+
Sbjct: 563 EIDILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQSLVMNYGV 607
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 180/525 (34%), Positives = 278/525 (52%)
Query: 188 FLSKINSNQVAKVEVDGVHIMF-KLKNDGSIQE--SEVITNKFQESESL--------LKS 236
+ +K+ + ++ D H M+ K +D + E S +N E ++ + S
Sbjct: 102 YTNKLKYTNLDNIKYDSDHNMYNKSMHDTTTNEMHSNERSNNIYEGNNVNSENNYNNMSS 161
Query: 237 VTPTKRIVYTTTRPSDIKTPYEKMLENQ--VEFGSPDKRSGGFLNSALIAL-FYVAVLAG 293
T ++ Y + + Y ++ + ++ D G N + F + V AG
Sbjct: 162 NHSTHKVEYMDKKRNQHPEMYSLHIDPKKPLKVSVIDSNKKGLWNLLKSTIGFLILVAAG 221
Query: 294 LLHRFPVSFSQTAG-QVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLR 352
++ VS + G V ++K + + +TFADV G DE K+ELEEI+++L+
Sbjct: 222 SVYMEGVSQNVQKGIGVSNKKI-------IPVENVKVTFADVKGCDEVKQELEEIIDYLK 274
Query: 353 SPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASR 412
+ DK+ ++GA+ P+G+LL G PGTGKTL+A+A+AGEA VPF+ S SEF E++VG+GA R
Sbjct: 275 NSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQASGSEFEEMFVGVGARR 334
Query: 413 VRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAV 472
+R+LF AKK AP I+FIDEIDAV R R N TLNQLL E+DGF+ N +
Sbjct: 335 IRELFQAAKKHAPCIVFIDEIDAVGSKRSSR----DNSAVRMTLNQLLVELDGFEQNEGI 390
Query: 473 IVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDI 532
+V+ ATN LD AL RPGR D+ ++V PD GR ILK++ +K + L+KD+DL +
Sbjct: 391 VVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKGRYEILKMYSNK--IVLSKDVDLHVL 448
Query: 533 ASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKA 592
+ T G TG K V+ A +R + G+++K+ L EK
Sbjct: 449 SRRTVGMTGADLNNILNIAAIKCSVEGKKSVDMNSIEQAFDRVVVGLQRKSP-LNEEEKN 507
Query: 593 VVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCG 652
+ A HE GH T V G V K +I+PR G +LG T+ D+Y I ++
Sbjct: 508 ITAYHEGGH----TLVNFYTKGSDPVHKATIMPR-GMSLGVTWKIPISDKYSQKIKDVQS 562
Query: 653 RLVTLLGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGL 696
+ L+GG +EE+ + ++TG D+++AT +A + YG+
Sbjct: 563 EIDILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQSLVMNYGV 607
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 697 (250.4 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 173/426 (40%), Positives = 243/426 (57%)
Query: 282 LIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDT-ITFADVAGVDEA 340
L+ + V ++ L R P +F + G ++ A+V G T + FADVAG+DEA
Sbjct: 381 LVVMTMVLLVRFTLSRRPKNFRKWDLWQGIAFSQSKAEARVD--GSTGVKFADVAGIDEA 438
Query: 341 KEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASE 400
+EL+E+V++L++PD + ++G +PP GVLL G PG GKTL+AKA+AGEA VPF + SE
Sbjct: 439 VDELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSE 498
Query: 401 FVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSND-------ERE 453
FVE+ VG+G++R+RDLF RAK PS+IFIDEIDA+A R G F+ S+ ERE
Sbjct: 499 FVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQERE 558
Query: 454 QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILK 513
TLNQLL E+DGFD+ VI LGATNR D+LDPAL RPGRFDR + V P+ GR ILK
Sbjct: 559 TTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLDILK 618
Query: 514 VHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVE 573
+H SK + ++ +DL AS G++G R + + D AV+
Sbjct: 619 IHASK--VKMSDSVDLSSYASNLPGWSGAKLAQLVQEAALVAVRKTHNSILQSDMDDAVD 676
Query: 574 RSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQ-PRVEKLSILPRTGGALG 632
R G + +L + A E G A+ + + R +++SI+PR G L
Sbjct: 677 RLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLLLRYENAKIERCDRVSIIPR-GQTLS 735
Query: 633 FTYTPANEDRYLLF--IDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKA 690
+D +F + +L RL LLGGRAAEEV Y S ++D + A+ +A K
Sbjct: 736 QVVFHRLDDESYMFGRLPQLLHRLQVLLGGRAAEEVIYGSDTSKASVDYLSDASWLARKI 795
Query: 691 IAEYGL 696
+ + L
Sbjct: 796 LTIWNL 801
Score = 37 (18.1 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 275 GGFLNSALIALFYVAVLAGLLHRFPVS 301
GGFL SA+ A+ A + + +P++
Sbjct: 299 GGFLASAVFAVTSFAFVTTVYVVWPIA 325
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 690 (248.0 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 162/407 (39%), Positives = 232/407 (57%)
Query: 309 VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGV 368
V R T G A Q +TF V GV+EAK+EL+E+VEFL++P K+ LG + P+G+
Sbjct: 258 VRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGI 317
Query: 369 LLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSII 428
LLVG PGTGKTLLA+AVAGEA+VPF S SEF E++VG+GASR+R+LF AK AP +I
Sbjct: 318 LLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVI 377
Query: 429 FIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPAL 488
FIDE+D+V R + QT+NQLL EMDGF N VI++GATN + LD AL
Sbjct: 378 FIDELDSVGGKR---IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNAL 434
Query: 489 RRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXX 548
RPGRFD V V PD GR ILK +++K + + D ++ IA T GF+G
Sbjct: 435 IRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEI--IARGTVGFSGAELENLV 492
Query: 549 XXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAV 608
K +V + + ++ + G E+++ ++ K + A HE+GHA++
Sbjct: 493 NQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYT 552
Query: 609 ASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY 668
+P + K +I+PR G LG DR+ +L ++ +GGR AEE+ +
Sbjct: 553 KDAMP----INKATIMPR-GPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIF 607
Query: 669 -SGRISTG--ALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGG 712
S I+TG A D AT +A + + ++G++ +G + T S G
Sbjct: 608 GSDHITTGYCASSDFDNATKIAKRMVTKFGMSEKLG---VMTYSDTG 651
Score = 40 (19.1 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 7/29 (24%), Positives = 19/29 (65%)
Query: 138 QPIIQAQEIGVLLLQLGIVMFVMRLLRPG 166
+P++ +++G+ L++G + ++ L PG
Sbjct: 55 EPVLNLRDLGLSELKIGQIDQLVDSLLPG 83
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 171/433 (39%), Positives = 247/433 (57%)
Query: 285 LFYVAVLAGL--LHRFPV-----SFSQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGV 337
+ +V +LAG+ + R P SFS T V R T G + Q ITF V GV
Sbjct: 244 IIFVLLLAGIYGVSRSPFFSGKGSFSDT---VRFRTTSGLDSSVDPVQMKNITFEHVKGV 300
Query: 338 DEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCS 397
+EAK EL+++VEFLR+P K+ LG + P+G+LLVG PGTGKTLLA+AVAGEA+VPF S
Sbjct: 301 EEAKNELQDVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYAS 360
Query: 398 ASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLN 457
SEF E++VG+GASR+R+LF AK AP +IFIDE+D+V R + QT+N
Sbjct: 361 GSEFDEMFVGVGASRIRNLFKEAKASAPCVIFIDELDSVGGKR---IESPMHPYSRQTIN 417
Query: 458 QLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVS 517
QLL EMDGF N VIV+GATN ++ LD AL RPGRFD V V PD GR IL+ ++
Sbjct: 418 QLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQVTVPIPDVKGRTEILEWYLK 477
Query: 518 KKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIA 577
K ++ A D ++ IA T GF+G K +V + A ++ +
Sbjct: 478 KIKVDSAIDAEI--IARGTVGFSGAELENLVNQAALKAAADGKDLVTMKELKFAKDKILM 535
Query: 578 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTP 637
G E+++ ++ K + A HE+GHA+V +P + K +I+PR G +LG
Sbjct: 536 GPERRSVEIDKRNKTITAYHESGHAIVAYYTKDAMP----INKATIMPR-GPSLGHVSLL 590
Query: 638 ANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSG-RISTGALDDIRRATDMAYKAIAEYGL 696
DR+ +L ++ +GGR AEE+ + +I++GA D AT +A + +G+
Sbjct: 591 PENDRWSETRAQLLAQMDVSMGGRVAEELVFGNDQITSGASSDFDGATKIAQMMVTRFGM 650
Query: 697 NRTIGPVSIATLS 709
+ +G ++ + L+
Sbjct: 651 SDKLGVMTYSDLT 663
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 182/494 (36%), Positives = 267/494 (54%)
Query: 235 KSVTPT-KRIVYTTTRPSDIKTPYEKMLENQ-VEFGSPDK-RSG---GFLNSALIA---- 284
+ +TP+ + T + D++T EK+L+N+ + G D ++G GFL + +
Sbjct: 178 EGITPSFMKGFLTRDKGPDVET-LEKLLKNKNIPEGQHDAFKTGFAEGFLKAQALTQRTQ 236
Query: 285 --------LFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAG 336
+ V +L GL F V R T G A Q +TF V G
Sbjct: 237 ESLRRTRLILLVLLLVGLYGLSKTPFLS----VRFRTTSGLDSAVDPVQMKNVTFEHVKG 292
Query: 337 VDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISC 396
V+EAK EL+E+VEFLR+P K+ LG + P+G+LLVG PGTGKTLLA+AVAGEA+VPF
Sbjct: 293 VEEAKNELQEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYA 352
Query: 397 SASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTL 456
S SEF E++VG+GASR+R+LF AK AP +IFIDE+D+V R + QT+
Sbjct: 353 SGSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGGKR---IESPMHPYSRQTI 409
Query: 457 NQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHV 516
NQLL EMDGF N VI++GATN + LD AL RPGRFD V V PD GR ILK ++
Sbjct: 410 NQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYL 469
Query: 517 SKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSI 576
K ++ A + ++ IA T GF+G K +V + A ++ +
Sbjct: 470 KKIKVDSAVEAEV--IARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFAKDKIL 527
Query: 577 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYT 636
G E+++A++ K + A HE+GHA++ +P + K +I+PR G LG
Sbjct: 528 MGPERRSAEIDKRNKEITAYHESGHAIIAYYTKDAMP----INKATIMPR-GPTLGHVSM 582
Query: 637 PANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGR-ISTGALDDIRRATDMAYKAIAEYG 695
DR+ +L ++ +GGR AEE+ + I+TGA D AT +A + +G
Sbjct: 583 LPENDRWSETRAQLLAQMDVSMGGRVAEELIFGNENITTGASSDFDSATKIAKMMVTRFG 642
Query: 696 LNRTIGPVSIATLS 709
++ +G ++ + L+
Sbjct: 643 MSEKLGVMTYSDLT 656
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 161/405 (39%), Positives = 232/405 (57%)
Query: 309 VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGV 368
V R T G A Q +TF V GV+EAK+EL+E+VEFL++P K+ LG + P+G+
Sbjct: 292 VRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGI 351
Query: 369 LLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSII 428
LLVG PGTGKTLLA+AVAGEA+VPF S SEF E++VG+GASR+R+LF AK AP +I
Sbjct: 352 LLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVI 411
Query: 429 FIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPAL 488
FIDE+D+V R + QT+NQLL EMDGF N VI++GATN + LD AL
Sbjct: 412 FIDELDSVGGKR---IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNAL 468
Query: 489 RRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXX 548
RPGRFD V V PD GR ILK +++K + + D ++ IA T GF+G
Sbjct: 469 IRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEI--IARGTVGFSGAELENLV 526
Query: 549 XXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAV 608
K +V + + ++ + G E+++ ++ K + A HE+GHA++
Sbjct: 527 NQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYT 586
Query: 609 ASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY 668
+P + K +I+PR G LG DR+ +L ++ +GGR AEE+ +
Sbjct: 587 KDAMP----INKATIMPR-GPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIF 641
Query: 669 -SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGG 712
+ I+TGA D AT +A + + ++G++ +G + T S G
Sbjct: 642 GTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG---VMTYSDTG 683
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 161/405 (39%), Positives = 232/405 (57%)
Query: 309 VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGV 368
V R T G A Q +TF V GV+EAK+EL+E+VEFL++P K+ LG + P+G+
Sbjct: 258 VRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGI 317
Query: 369 LLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSII 428
LLVG PGTGKTLLA+AVAGEA+VPF S SEF E++VG+GASR+R+LF AK AP +I
Sbjct: 318 LLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVI 377
Query: 429 FIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPAL 488
FIDE+D+V R + QT+NQLL EMDGF N VI++GATN + LD AL
Sbjct: 378 FIDELDSVGGKR---IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNAL 434
Query: 489 RRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXX 548
RPGRFD V V PD GR ILK +++K + + D ++ IA T GF+G
Sbjct: 435 IRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEI--IARGTVGFSGAELENLV 492
Query: 549 XXXXXXXGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAV 608
K +V + + ++ + G E+++ ++ K + A HE+GHA++
Sbjct: 493 NQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYT 552
Query: 609 ASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY 668
+P + K +I+PR G LG DR+ +L ++ +GGR AEE+ +
Sbjct: 553 KDAMP----INKATIMPR-GPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIF 607
Query: 669 -SGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGG 712
+ I+TGA D AT +A + + ++G++ +G + T S G
Sbjct: 608 GTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG---VMTYSDTG 649
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 167/432 (38%), Positives = 239/432 (55%)
Query: 273 RSGGFLNSALIAL-FYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSE-QGDTIT 330
R L+ L L FY+A+ + L SFS +T A V Q +T
Sbjct: 222 RRSRLLSFFLFVLCFYLAIYSSFLPG-KGSFSDAV----RFRTSSIFDAAVDPIQLKNVT 276
Query: 331 FADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAE 390
F V GV+EAK+EL+E+VEFL++P K+ LG + P+G+LLVG PGTGKTLLA+AVAGEA+
Sbjct: 277 FEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEAD 336
Query: 391 VPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSND 450
VPF S SEF E++VG+GASR+R LF AK AP +IFIDE+D+V R +
Sbjct: 337 VPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKR---IESPMHP 393
Query: 451 EREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREA 510
QT+NQLL EMDGF N V+++GATN + LD AL RPGRFD V V PD GR
Sbjct: 394 YSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRTE 453
Query: 511 ILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIH 570
ILK +++K + + D ++ IA T GF+G K +V +
Sbjct: 454 ILKWYLNKIKYDQSVDPEI--IARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEF 511
Query: 571 AVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGA 630
+ ++ + G E+++ ++ K + A HE+GHA++ +P + K +I+ R G
Sbjct: 512 SKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMP----INKATIMTR-GTT 566
Query: 631 LGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY-SGRISTGALDDIRRATDMAYK 689
LG DR+ +L ++ +GGRAAEE+ + S I+TGA D AT +A
Sbjct: 567 LGHVSLLPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKL 626
Query: 690 AIAEYGLNRTIG 701
+ +G++ +G
Sbjct: 627 MVTRFGMSEKLG 638
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 152/374 (40%), Positives = 219/374 (58%)
Query: 329 ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
+TF V GV+EAK+EL+E+VEFL++P K+ LG + P+G+LLVG PGTGKTLLA+AVAGE
Sbjct: 280 VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 339
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVS 448
A+VPF S SEF E++VG+GASR+R LF AK AP +IFIDE+D+V R
Sbjct: 340 ADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKR---IESPM 396
Query: 449 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGR 508
+ QT+NQLL EMDGF N V+++GATN + LD AL RPGRFD V V PD GR
Sbjct: 397 HPYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGR 456
Query: 509 EAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDF 568
ILK +++K + + D ++ IA T GF+G K +V +
Sbjct: 457 TEILKWYLNKIKYDQSVDPEI--IARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKEL 514
Query: 569 IHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTG 628
+ ++ + G E+++ ++ K + A HE+GHA++ +P + K +I+ R G
Sbjct: 515 EFSKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMP----INKATIMTR-G 569
Query: 629 GALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAY-SGRISTGALDDIRRATDMA 687
LG DR+ +L ++ +GGRAAEE+ + S I+TGA D AT +A
Sbjct: 570 TTLGHVSLLPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIA 629
Query: 688 YKAIAEYGLNRTIG 701
+ +G++ +G
Sbjct: 630 KLMVTRFGMSEKLG 643
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 177/425 (41%), Positives = 239/425 (56%)
Query: 183 VPYSDFLSKINSNQVAKV--EVDGVHIMFKLKND----GSIQESEVITNKFQE------S 230
VPYSDF++ + V+KV E I + + + +SE + + + +
Sbjct: 175 VPYSDFVTNLRGGSVSKVLLEEGSRRIYYNTDENVEVVDDVHKSETLEDPAIQIDGGTVT 234
Query: 231 ESLLKSVTPTK-RIV-----YTTTRPS-DIKTPYEKMLENQVEFGSPDKRSGGFLNSALI 283
E++ K TP K R + Y T + D K M E + + S + + + + LI
Sbjct: 235 EAVTKDDTPRKVRALPPVWKYVTRKVDHDEKFLLSLMREKGITYSSAPQSALMSMRTTLI 294
Query: 284 ALFYVAV-LAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKE 342
+ + + L L+ S + R+++ P T+ F DV GVD AK+
Sbjct: 295 TIISLWIPLTPLMWLLYRQLSASNSPAKKRRSKNP----------TVGFDDVEGVDSAKD 344
Query: 343 ELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFV 402
EL EIV L+ Y +LGAR PRGVLLVG PGTGKTLLA+AVAGEA VPF S SASEFV
Sbjct: 345 ELVEIVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFV 404
Query: 403 ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTE 462
EL+VG GA+R+RDLF A+K +PSIIFIDE+DAV R F NDER+QTLNQLLTE
Sbjct: 405 ELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKRGRSF----NDERDQTLNQLLTE 460
Query: 463 MDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELP 522
MDGF+S++ VIV+ ATNR + LD AL RPGRF R V+V PD+ GR IL +H+ +++P
Sbjct: 461 MDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAIHL--RDVP 518
Query: 523 LAKDIDL-GD-IASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSIAGIE 580
L +D L D +AS+T GF G R V + D + A+ER+ GI
Sbjct: 519 LEEDAFLICDLVASLTPGFVGADLANIVNEAALLAARRGGEAVAREDIMEAIERAKFGIN 578
Query: 581 KKTAK 585
K A+
Sbjct: 579 DKEAR 583
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 632 (227.5 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 151/356 (42%), Positives = 207/356 (58%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAK 383
E+G + F DVAG+ + + ELEEIV+F + Y R G + P G+LL G PG GKTLLAK
Sbjct: 402 ERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAK 461
Query: 384 AVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGR 443
AVAGEA V F S SAS+FVE+YVG+GASRVR L+ A++ APS++FIDE+DAV + R G
Sbjct: 462 AVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRER-GL 520
Query: 444 FRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETP 503
+ ER+ TLNQLL +DGF+ VI + +TNR D+LDPAL RPGRFDR + + P
Sbjct: 521 IKGSGGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKP 580
Query: 504 DKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVV 563
IGR IL+VH KK P+A+D+D +ASMT G G R + +
Sbjct: 581 GLIGRMEILQVHARKK--PMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMRDGRTEL 638
Query: 564 EKIDFIHAVERSIAG-IEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLS 622
D + A + G +++K L+ + VA +EA AVV AV P +E L+
Sbjct: 639 TTDDLLQAAQIEERGMLDRKDRSLETWRQ--VAINEAAMAVV--AVN--FPDMKNIEFLT 692
Query: 623 ILPRTGGALGFTYTPANEDRY---LLFIDELCGRLVTLLGGRAAEEVAYS-GRIST 674
I PR G LG+ + ++ +L + + L RAA+E+ Y ++ST
Sbjct: 693 INPRAGRELGYVRVKMDHIKFKEGMLSRQSILDHITVQLAPRAADELWYGEDQLST 748
Score = 41 (19.5 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 20/85 (23%), Positives = 34/85 (40%)
Query: 181 VSVPYSDFLSKINSNQVA----KVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKS 236
V PY FL K+ + + K E + +++ D Q E I +E + K+
Sbjct: 197 VPSPYLGFLWKVPAYMLTWVKPKKESKRAAELKRMREDFKRQRKEEIETMKEERVMMEKT 256
Query: 237 VTPTKRIVYTTTRPSDIKTPYEKML 261
+ K+ R + K YE+ L
Sbjct: 257 MKAQKKQQERKKRKAVRKKKYEESL 281
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 163/423 (38%), Positives = 234/423 (55%)
Query: 283 IALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDTIT-FADVAGVDEAK 341
++L ++ VL L++ S + T + K + + E T T F DV G+ E K
Sbjct: 252 VSLLWLPVLLFLVYSL-TSETSTVKEANGNKPQY-FAKEYDETNQTPTSFDDVKGIQEVK 309
Query: 342 EELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEF 401
EELEEIV++L P KY +GA+ P+GVLL G PGTGKTLLA+A+AGEA V F+ + S F
Sbjct: 310 EELEEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKTLLARAIAGEAGVSFLYTTGSSF 369
Query: 402 VELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLT 461
E YVG+G+ RVR+LF A+++ P IIFIDEIDAV KSR+ +TL QLLT
Sbjct: 370 DEKYVGVGSRRVRELFNAAREKQPCIIFIDEIDAVGKSRN-------TAHHNETLLQLLT 422
Query: 462 EMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKEL 521
EMDGF+ NS ++++GATN + LDPAL RPGRFDR + V PD GR I+ H KK +
Sbjct: 423 EMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKGRSEIID-HYLKK-V 480
Query: 522 PLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK--VVVEKIDFIHAVERSIAGI 579
++ IA T GFTG + K + +++ID A + + G
Sbjct: 481 KHTVEVKADTIARATPGFTGADLSNLINTAAIKAVQNGKETISIKQID--DARDDILMGR 538
Query: 580 EKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPAN 639
+ A + + A HEAGHA+V + P + K +I+ R G ALG
Sbjct: 539 ARLNAVMSEEARRNTAYHEAGHALVAAMTEAADP----IHKATIVQR-GQALGMVSQLPE 593
Query: 640 EDRYLLFIDELCGRLVTLLGGRAAEEVAYS-GRISTGALDDIRRATDMAYKAIAEYGLNR 698
D ++ RL L GRAAEE+ + +++GA D ++A+ +A+ I ++G++
Sbjct: 594 MDHVQYTRKQMMARLAICLAGRAAEEIFFGVDGVTSGASSDFQQASSLAFSMITKWGMSD 653
Query: 699 TIG 701
+G
Sbjct: 654 KVG 656
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 145/327 (44%), Positives = 196/327 (59%)
Query: 277 FLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAG 336
F+ + I+L Y A L ++P+S + + ITF DVAG
Sbjct: 98 FIIALFISLGYFARKKELA-KYPISNKNQNHTQAQNSNINLESSHIKPVISNITFNDVAG 156
Query: 337 VDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISC 396
VDE K EL E+V+FL++P KY G + P+GVL+VG PG GKTL+AKAVAGEA VPF
Sbjct: 157 VDEVKMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAGVPFFYQ 216
Query: 397 SASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTL 456
S S FVE+YVGMGA RVR+LF++AK APSI+FIDEIDAV K+R G +SN ER+ TL
Sbjct: 217 SGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKAR-GE---MSNVERDSTL 272
Query: 457 NQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHV 516
NQLLT+MDGF+ NS VIV+ ATN+ +++DPAL R GRFDR + + PD R IL++++
Sbjct: 273 NQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYM 332
Query: 517 SKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDFIHAVERSI 576
K +I+L IA + GF+G R N +VE+ DF + + +
Sbjct: 333 KDKN----NNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFYAVLNKVL 388
Query: 577 AGIEKKTAKLKGSEKAVVARHEAGHAV 603
G +KK EK + A ++A A+
Sbjct: 389 LG-KKKILSFNNEEKKIQATYQAAKAL 414
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 129/215 (60%), Positives = 159/215 (73%)
Query: 316 GPGGAKVSEQGDT--ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGL 373
G AK+ Q + I F DVAG DE+KEE+ E V+FL+ P KY +LGA+ PRG +L G
Sbjct: 269 GKSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGP 328
Query: 374 PGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEI 433
PGTGKTLLAKA AGEA VPF+S S SEFVE++VG+GASRVRDLF A++ AP+IIF+DEI
Sbjct: 329 PGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEI 388
Query: 434 DAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGR 493
DA+ K R G R+ NDERE TLNQLL EMDGFD+ V+VL TNR D+LD AL RPGR
Sbjct: 389 DAIGKER-GNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGR 447
Query: 494 FDRVVMVETPDKIGREAILKVHVSKKELPLAKDID 528
FDR + ++ PD GR+ I KVH++K +L +DID
Sbjct: 448 FDRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDID 482
Score = 269 (99.8 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 81/270 (30%), Positives = 130/270 (48%)
Query: 446 IVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDK 505
+++ R L++ L FD + ++ V R + L + + V ++ K
Sbjct: 428 VLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKL-KLKSVQDIDAKQK 486
Query: 506 IGREAILKVHVSKKELPLAKDID--LGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVV 563
V SK + ++I+ G +A++T GF G R + V
Sbjct: 487 -------DVDFSKYQQLKNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAV 539
Query: 564 EKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSI 623
+ F A+ER IAG+EKK+ L EK VA HEAGHA+ G L P V K+SI
Sbjct: 540 DTYHFEQAIERVIAGLEKKSRILSPEEKKTVAYHEAGHAICGWF---LQYADPLV-KVSI 595
Query: 624 LPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRR 682
+PR GALG+ Y P +D+YL ++ R++ LGGR +EE+ + +++GA DD ++
Sbjct: 596 IPRGQGALGYAQYLP--KDQYLTSQEQFKHRMIMTLGGRVSEELHFD-TVTSGASDDFKK 652
Query: 683 ATDMAYKAIAEYGLNRTIGPVSIATLSSGG 712
T MA + I + G++ +G + T S G
Sbjct: 653 ITQMAQQMILKLGMSDKLGQICYDTSSDNG 682
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 129/215 (60%), Positives = 159/215 (73%)
Query: 316 GPGGAKVSEQGDT--ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGL 373
G AK+ Q + I F DVAG DE+KEE+ E V+FL+ P KY +LGA+ PRG +L G
Sbjct: 269 GKSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGP 328
Query: 374 PGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEI 433
PGTGKTLLAKA AGEA VPF+S S SEFVE++VG+GASRVRDLF A++ AP+IIF+DEI
Sbjct: 329 PGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEI 388
Query: 434 DAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGR 493
DA+ K R G R+ NDERE TLNQLL EMDGFD+ V+VL TNR D+LD AL RPGR
Sbjct: 389 DAIGKER-GNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGR 447
Query: 494 FDRVVMVETPDKIGREAILKVHVSKKELPLAKDID 528
FDR + ++ PD GR+ I KVH++K +L +DID
Sbjct: 448 FDRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDID 482
Score = 269 (99.8 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 81/270 (30%), Positives = 130/270 (48%)
Query: 446 IVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDK 505
+++ R L++ L FD + ++ V R + L + + V ++ K
Sbjct: 428 VLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKL-KLKSVQDIDAKQK 486
Query: 506 IGREAILKVHVSKKELPLAKDID--LGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVV 563
V SK + ++I+ G +A++T GF G R + V
Sbjct: 487 -------DVDFSKYQQLKNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAV 539
Query: 564 EKIDFIHAVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSI 623
+ F A+ER IAG+EKK+ L EK VA HEAGHA+ G L P V K+SI
Sbjct: 540 DTYHFEQAIERVIAGLEKKSRILSPEEKKTVAYHEAGHAICGWF---LQYADPLV-KVSI 595
Query: 624 LPRTGGALGFT-YTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRR 682
+PR GALG+ Y P +D+YL ++ R++ LGGR +EE+ + +++GA DD ++
Sbjct: 596 IPRGQGALGYAQYLP--KDQYLTSQEQFKHRMIMTLGGRVSEELHFD-TVTSGASDDFKK 652
Query: 683 ATDMAYKAIAEYGLNRTIGPVSIATLSSGG 712
T MA + I + G++ +G + T S G
Sbjct: 653 ITQMAQQMILKLGMSDKLGQICYDTSSDNG 682
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 575 (207.5 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 149/381 (39%), Positives = 203/381 (53%)
Query: 333 DVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVP 392
DV G++ AK L E+V +L++P+K + G + P G L G PGTGKTLLAKAVAGE E+P
Sbjct: 852 DVIGLERAKRRLIEVVSWLKAPEKLLNFGIKIPTGFLFSGPPGTGKTLLAKAVAGECELP 911
Query: 393 FISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDER 452
F S +ASE + G ++ LFA A+K APSIIFIDEIDA+A R S D +
Sbjct: 912 FFSVAASELSTPHSGGTTENIKQLFATARKYAPSIIFIDEIDAIAAQRTDNSDGSSRD-K 970
Query: 453 EQTLNQLLTEMDGFD-SNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAI 511
T+N LLTEMDGF + V V+ ATN +LD A+ RPGRFD + + P+K R
Sbjct: 971 NLTVNALLTEMDGFSIAEVPVFVMAATNHPQLLDSAITRPGRFDETIYCDLPNKNARLIF 1030
Query: 512 LKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXX-GRLNKVVVEKIDFIH 570
K SK +L ++ +L + S G + G ++ E I
Sbjct: 1031 FKRFASKHKLNW-QETELQQLVSSAQGMSSAEIDQVLRESIYQAVGENQQLTTEHIK--Q 1087
Query: 571 AVERSIAGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGA 630
+ R + G L EK A HEA H + A L P QP ++ ++I PR A
Sbjct: 1088 TMIRIVYGAPSDHIFLGAEEKRRTAYHEAAHLL---AYKLLFPKQP-IDFITIEPRNQ-A 1142
Query: 631 LGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSG--RISTGALDDIRRATDMAY 688
LGF T A+E+ + +L LL GR AE++ +STGA +DI +AT +A
Sbjct: 1143 LGFVATRASEEYESYSKRRVMHKLQVLLAGRVAEKLCTGDCEEVSTGASNDIEKATQLAM 1202
Query: 689 KAIAEYGLNRTIGPVSIATLS 709
AI E G+ T+GPV+IA L+
Sbjct: 1203 HAIYEGGIEPTVGPVNIAMLT 1223
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 538 (194.4 bits), Expect = 9.5e-54, Sum P(2) = 9.5e-54
Identities = 133/310 (42%), Positives = 182/310 (58%)
Query: 316 GPGGAK-VSEQGDT-ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGL 373
G AK +S + T +TF D AG + K EL+EIV L++ +++ G P+GVLL G
Sbjct: 298 GKSRAKFISAEEKTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGP 357
Query: 374 PGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEI 433
PGTGKTLLAKA+AGEA +PF + + ++FVE++VG+ ASRV+DLFA ++ APSIIFIDEI
Sbjct: 358 PGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEI 417
Query: 434 DAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFD-SNSAVIVLGATNRSDVLDPALRRPG 492
DA+ R G EREQ L Q+LTEMDGF + S V+V+GATNR D+LDPAL R G
Sbjct: 418 DAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKG 477
Query: 493 RFDRVVMVETPDKIGREAILKVHVSKKELPLAKDID--LGDIASMTTGFTGXXXXXXXXX 550
RFD+++ V P K GR AILKVH K + + L ++A T FTG
Sbjct: 478 RFDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNE 537
Query: 551 XXXXXGRLNKVVVEKIDFIHAVERSIAGIE---KKTAKLKGSEKAVVARHEAGHAVVGTA 607
R + + + + + A++R E + + ++ K +A EA AV+
Sbjct: 538 AGILTARKDLDYIGREELLEALKRQKGTFETGQEDSTEVPEELKLRLAYREAAVAVL--- 594
Query: 608 VASLLPGQPR 617
A LP Q R
Sbjct: 595 -ACYLPDQYR 603
Score = 46 (21.3 bits), Expect = 9.5e-54, Sum P(2) = 9.5e-54
Identities = 23/99 (23%), Positives = 44/99 (44%)
Query: 185 YSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPTKRIV 244
++D K++ Q+ VEV V ++ + ++ V + + SL + R +
Sbjct: 212 WNDVWKKLHQ-QIVNVEVFNVDVV-PAEVYTTVATFVVWSMRLALFVSLYVWIDSITRPI 269
Query: 245 YTTTRPSDIKTPYEKM---LENQVEFGSPDKRSGGFLNS 280
Y P D+ TP +K+ L+ Q GS K F+++
Sbjct: 270 YAKLIPCDLGTPTKKIRQPLKRQA-LGSLGKSRAKFISA 307
Score = 44 (20.5 bits), Expect = 1.5e-53, Sum P(2) = 1.5e-53
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 169 LPGSE--PRTSTTFVSVPYSDFLSKINSNQVAKVE 201
L G+E P TS + +SDF+ ++SN V +E
Sbjct: 135 LKGTEWDPETSHR---INFSDFMKLLDSNSVQYME 166
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 120/266 (45%), Positives = 167/266 (62%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ + + D+ G+++ +E+ E+VE L+ P+ + ++G PP+G+LL G PGTGKTLLA
Sbjct: 162 DERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLA 221
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA E FI SE V+ ++G GAS V+D+F AK++APSIIFIDEIDA+A R
Sbjct: 222 KAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTD 281
Query: 443 RFRIVSND-EREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
+ D E ++TL QLL EMDGFD+ V ++GATNR D+LDPA+ RPGRFDR++ V
Sbjct: 282 A--LTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVP 339
Query: 502 TPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKV 561
PD+ GR ILK+H K + LA+D++L +IA MT G G R +
Sbjct: 340 APDEKGRLEILKIHTRK--MNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRD 397
Query: 562 VVEKIDFIHAVERSIAGIEKKTAKLK 587
V DF AVE+ + EKK K+K
Sbjct: 398 YVTMDDFRKAVEKIM---EKKKVKVK 420
>TIGR_CMR|CPS_1795 [details] [associations]
symbol:CPS_1795 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 HOGENOM:HOG000133952 ProtClustDB:CLSK741075
RefSeq:YP_268526.1 ProteinModelPortal:Q484I9 STRING:Q484I9
GeneID:3521104 KEGG:cps:CPS_1795 PATRIC:21466745
BioCyc:CPSY167879:GI48-1865-MONOMER Uniprot:Q484I9
Length = 1301
Score = 549 (198.3 bits), Expect = 8.2e-52, P = 8.2e-52
Identities = 149/422 (35%), Positives = 212/422 (50%)
Query: 293 GLLHRFPVSFSQ-TAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFL 351
G + F VSF Q + QV K ++ T DV G+ AK L +++E++
Sbjct: 829 GKIENFDVSFHQLSVNQVIESKDIQETSF-FNQSLPTEKLDDVIGLQRAKNRLLDVIEWM 887
Query: 352 RSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGAS 411
+ PDK + P G L G PGTGKT LAKAVAGE +PF S SASE +G +
Sbjct: 888 KFPDKLQNFDVKIPTGFLFAGPPGTGKTFLAKAVAGECGLPFFSVSASELSSTIIGGSSE 947
Query: 412 RVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSN-S 470
++ LF+ A+K APSI+FIDEIDA+A R + S ER +N LLTEMDGF S+ S
Sbjct: 948 KIMALFSVARKYAPSIVFIDEIDAIASQRSEDSQGNSR-ERNAIVNTLLTEMDGFSSSES 1006
Query: 471 AVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLG 530
V V+ ATN +LD A+ RPGRFD + + P+ R + K+ L + DL
Sbjct: 1007 PVFVMAATNYPQLLDKAILRPGRFDETIFCDLPNSEARTIFFEKFAQKQNLQWQQS-DLT 1065
Query: 531 DIASMTTGFTGXXXXXXXXXXXXXX-GRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGS 589
+ S + G + G + +E I + R + G + KL
Sbjct: 1066 ALVSSSQGMSSAEIDQVLREAIYQAVGTEKPLTIEHIK--QTIVRVVYGSPSENIKLGKE 1123
Query: 590 EKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDE 649
EK A HEA H + L P Q ++ +I PR +LGF T A+E+
Sbjct: 1124 EKRRTAFHEAAHLLT---YKLLFPNQI-IDFATIEPRNQ-SLGFVATRASEEYESYSKTR 1178
Query: 650 LCGRLVTLLGGRAAEEVAYSG--RISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIAT 707
+ +L LL GR AE++ + ISTGA +DI +AT +A AI + G+ ++GPV++
Sbjct: 1179 VMNKLQVLLAGRVAEKLCTNNADEISTGASNDIEKATQLAMHAIYDGGIEESVGPVNVGI 1238
Query: 708 LS 709
L+
Sbjct: 1239 LT 1240
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 91/214 (42%), Positives = 144/214 (67%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+++ K EL+E+V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 206 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 265
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 266 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD- 324
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 325 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 384
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K P+AKD+DL +A MT GF+G
Sbjct: 385 RVAILKANLRKS--PVAKDVDLDFLAKMTNGFSG 416
Score = 274 (101.5 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 65/145 (44%), Positives = 86/145 (59%)
Query: 397 SASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTL 456
S E + G S +R F A+K AP+IIFIDE+DA+A R+ V ER + +
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEV---ER-RIV 57
Query: 457 NQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHV 516
+QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V + PD GR IL++H
Sbjct: 58 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT 117
Query: 517 SKKELPLAKDIDLGDIASMTTGFTG 541
K + LA D+DL + + T G G
Sbjct: 118 --KNMKLADDVDLEQVGNETHGHVG 140
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 502 (181.8 bits), Expect = 1.7e-47, P = 1.7e-47
Identities = 94/213 (44%), Positives = 143/213 (67%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ D+ G++ K+EL+E+V++ + PDK+++ G +P RGVL G PG GKTLLAKA+A E
Sbjct: 472 TWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 531
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVS 448
+ FIS E + ++ G + VRD+F +A+ AP ++F DE+D++AK+R G
Sbjct: 532 CQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAG 591
Query: 449 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGR 508
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD R
Sbjct: 592 G-AADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSR 650
Query: 509 EAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
EAILK ++ K PLAK++DL IA +T GF+G
Sbjct: 651 EAILKANLRKS--PLAKEVDLTYIAKVTQGFSG 681
Score = 411 (149.7 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 92/219 (42%), Positives = 132/219 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ G + +++E+VE LR P + +G +PPRG+L+ G PGTGKTL+A
Sbjct: 193 ESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIA 252
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K +P+IIFIDEIDA+A RD
Sbjct: 253 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDK 312
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG +S +IV+ ATNR + +DPALRR GRFDR + +
Sbjct: 313 THGEV---ER-RIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGI 368
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR +L++H K + L D+DL IA+ + G G
Sbjct: 369 PDATGRLEVLRIHT--KNMKLHDDVDLEQIAAESHGHVG 405
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 502 (181.8 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 93/214 (43%), Positives = 144/214 (67%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
IT+ D+ G+D+ K EL+E+V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 474 ITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGD- 592
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG S V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 593 GGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K P++KD+DL +A MT GF+G
Sbjct: 653 RIAILKANLRKS--PISKDVDLDFLAKMTNGFSG 684
Score = 421 (153.3 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 96/219 (43%), Positives = 133/219 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ GV + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K AP+IIFIDE+DA+A R+
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V +
Sbjct: 316 THGEV---ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI 371
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + LA D+DL +A+ T G G
Sbjct: 372 PDATGRLEILQIHT--KNMKLADDVDLEQVANETHGHVG 408
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 498 (180.4 bits), Expect = 4.8e-47, P = 4.8e-47
Identities = 91/214 (42%), Positives = 144/214 (67%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+++ K EL+E+V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 472 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 531
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 532 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD- 590
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 591 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 650
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K P+AKD+DL +A MT GF+G
Sbjct: 651 RVAILKANLRKS--PVAKDVDLDFLAKMTNGFSG 682
Score = 333 (122.3 bits), Expect = 8.8e-27, P = 8.8e-27
Identities = 86/220 (39%), Positives = 124/220 (56%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ G + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G G S R KK +P+ + + + KS D
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGEGESACR------KKISPAPPPL-KTAGIFKSDDC 308
Query: 443 RFRIVSNDEREQTL-NQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
++ E E+ + +QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V +
Sbjct: 309 FPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 368
Query: 502 TPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + LA D+DL +A+ T G G
Sbjct: 369 IPDATGRLEILQIHT--KNMKLADDVDLEQVANETHGHVG 406
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 498 (180.4 bits), Expect = 5.0e-47, P = 5.0e-47
Identities = 91/214 (42%), Positives = 144/214 (67%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+++ K EL+E+V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 478 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD- 596
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 597 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 656
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K P+AKD+DL +A MT GF+G
Sbjct: 657 RVAILKANLRKS--PVAKDVDLDFLAKMTNGFSG 688
Score = 406 (148.0 bits), Expect = 6.6e-35, P = 6.6e-35
Identities = 94/220 (42%), Positives = 132/220 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ G + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F +K AP+IIFIDE+DA+A S D
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIA-SDDC 314
Query: 443 RFRIVSNDEREQTL-NQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
++ E E+ + +QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V +
Sbjct: 315 FPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 374
Query: 502 TPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + LA D+DL +A+ T G G
Sbjct: 375 IPDATGRLEILQIHT--KNMKLADDVDLEQVANETHGHVG 412
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 497 (180.0 bits), Expect = 6.3e-47, P = 6.3e-47
Identities = 91/214 (42%), Positives = 144/214 (67%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+++ K EL+E+V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD- 592
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K P+AKD+DL +A MT GF+G
Sbjct: 653 RIAILKANLRKS--PVAKDVDLDFLAKMTNGFSG 684
Score = 414 (150.8 bits), Expect = 8.0e-36, P = 8.0e-36
Identities = 94/219 (42%), Positives = 132/219 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ G + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K AP+IIFIDE+DA+A R+
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V +
Sbjct: 316 THGEV---ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI 371
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + L+ D+DL +A+ T G G
Sbjct: 372 PDSTGRLEILQIHT--KNMKLSDDVDLEQVANETHGHVG 408
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 497 (180.0 bits), Expect = 6.3e-47, P = 6.3e-47
Identities = 91/214 (42%), Positives = 144/214 (67%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+++ K EL+E+V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD- 592
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K P+AKD+DL +A MT GF+G
Sbjct: 653 RVAILKANLRKS--PVAKDVDLEFLAKMTNGFSG 684
Score = 416 (151.5 bits), Expect = 4.8e-36, P = 4.8e-36
Identities = 95/219 (43%), Positives = 132/219 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ G + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K AP+IIFIDE+DA+A R+
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V +
Sbjct: 316 THGEV---ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI 371
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + LA D+DL +A+ T G G
Sbjct: 372 PDATGRLEILQIHT--KNMKLADDVDLEQVANETHGHVG 408
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 497 (180.0 bits), Expect = 6.3e-47, P = 6.3e-47
Identities = 91/214 (42%), Positives = 144/214 (67%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+++ K EL+E+V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD- 592
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K P+AKD+DL +A MT GF+G
Sbjct: 653 RVAILKANLRKS--PVAKDVDLEFLAKMTNGFSG 684
Score = 416 (151.5 bits), Expect = 4.8e-36, P = 4.8e-36
Identities = 95/219 (43%), Positives = 132/219 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ G + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K AP+IIFIDE+DA+A R+
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V +
Sbjct: 316 THGEV---ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI 371
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + LA D+DL +A+ T G G
Sbjct: 372 PDATGRLEILQIHT--KNMKLADDVDLEQVANETHGHVG 408
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 497 (180.0 bits), Expect = 6.3e-47, P = 6.3e-47
Identities = 91/214 (42%), Positives = 144/214 (67%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+++ K EL+E+V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD- 592
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K P+AKD+DL +A MT GF+G
Sbjct: 653 RVAILKANLRKS--PVAKDVDLEFLAKMTNGFSG 684
Score = 416 (151.5 bits), Expect = 4.8e-36, P = 4.8e-36
Identities = 95/219 (43%), Positives = 132/219 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ G + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K AP+IIFIDE+DA+A R+
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V +
Sbjct: 316 THGEV---ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI 371
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + LA D+DL +A+ T G G
Sbjct: 372 PDATGRLEILQIHT--KNMKLADDVDLEQVANETHGHVG 408
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 497 (180.0 bits), Expect = 6.3e-47, P = 6.3e-47
Identities = 91/214 (42%), Positives = 144/214 (67%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+++ K EL+E+V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD- 592
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K P+AKD+DL +A MT GF+G
Sbjct: 653 RVAILKANLRKS--PVAKDVDLEFLAKMTNGFSG 684
Score = 416 (151.5 bits), Expect = 4.8e-36, P = 4.8e-36
Identities = 95/219 (43%), Positives = 132/219 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ G + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K AP+IIFIDE+DA+A R+
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V +
Sbjct: 316 THGEV---ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI 371
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + LA D+DL +A+ T G G
Sbjct: 372 PDATGRLEILQIHT--KNMKLADDVDLEQVANETHGHVG 408
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 497 (180.0 bits), Expect = 6.3e-47, P = 6.3e-47
Identities = 91/214 (42%), Positives = 144/214 (67%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+++ K EL+E+V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD- 592
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K P+AKD+DL +A MT GF+G
Sbjct: 653 RVAILKANLRKS--PVAKDVDLEFLAKMTNGFSG 684
Score = 416 (151.5 bits), Expect = 4.8e-36, P = 4.8e-36
Identities = 95/219 (43%), Positives = 132/219 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ G + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K AP+IIFIDE+DA+A R+
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V +
Sbjct: 316 THGEV---ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI 371
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + LA D+DL +A+ T G G
Sbjct: 372 PDATGRLEILQIHT--KNMKLADDVDLEQVANETHGHVG 408
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 497 (180.0 bits), Expect = 7.1e-47, P = 7.1e-47
Identities = 91/214 (42%), Positives = 144/214 (67%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+++ K EL+E+V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 490 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 549
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 550 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD- 608
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 609 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 668
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K P+AKD+DL +A MT GF+G
Sbjct: 669 RVAILKANLRKS--PVAKDVDLEFLAKMTNGFSG 700
Score = 416 (151.5 bits), Expect = 5.1e-36, P = 5.1e-36
Identities = 95/219 (43%), Positives = 132/219 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ G + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 212 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 271
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K AP+IIFIDE+DA+A R+
Sbjct: 272 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 331
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V +
Sbjct: 332 THGEV---ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI 387
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + LA D+DL +A+ T G G
Sbjct: 388 PDATGRLEILQIHT--KNMKLADDVDLEQVANETHGHVG 424
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 494 (179.0 bits), Expect = 2.7e-46, P = 2.7e-46
Identities = 90/214 (42%), Positives = 144/214 (67%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+++ K EL+++V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD- 592
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K P+AKD+DL +A MT GF+G
Sbjct: 653 RVAILKANLRKS--PVAKDVDLEFLAKMTNGFSG 684
Score = 416 (151.5 bits), Expect = 4.8e-36, P = 4.8e-36
Identities = 95/219 (43%), Positives = 132/219 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ G + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K AP+IIFIDE+DA+A R+
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V +
Sbjct: 316 THGEV---ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI 371
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + LA D+DL +A+ T G G
Sbjct: 372 PDATGRLEILQIHT--KNMKLADDVDLEQVANETHGHVG 408
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 492 (178.3 bits), Expect = 1.1e-45, P = 1.1e-45
Identities = 90/214 (42%), Positives = 143/214 (66%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+++ K EL+E+V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD- 592
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 593 GGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K P+AKD+D+ +A MT GF+G
Sbjct: 653 RMAILKANLRKS--PVAKDVDVDFLAKMTNGFSG 684
Score = 414 (150.8 bits), Expect = 8.0e-36, P = 8.0e-36
Identities = 94/219 (42%), Positives = 132/219 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ G + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K AP+IIFIDE+DA+A R+
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V +
Sbjct: 316 THGEV---ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI 371
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + L+ D+DL +A+ T G G
Sbjct: 372 PDSTGRLEILQIHT--KNMKLSDDVDLEQVANETHGHVG 408
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 490 (177.5 bits), Expect = 2.6e-45, P = 2.6e-45
Identities = 89/214 (41%), Positives = 142/214 (66%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+++ K EL+E+V++ + PDK+++ G P +GVL G PG GKTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++AK+R G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD- 592
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD+
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++ K + A D+DL +A MT GF+G
Sbjct: 653 RVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSG 686
Score = 416 (151.5 bits), Expect = 4.8e-36, P = 4.8e-36
Identities = 95/219 (43%), Positives = 132/219 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + + + D+ G + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K AP+IIFIDE+DA+A R+
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG + VIV+ ATNR + +DPALRR GRFDR V +
Sbjct: 316 THGEV---ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI 371
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + LA D+DL +A+ T G G
Sbjct: 372 PDATGRLEILQIHT--KNMKLADDVDLEQVANETHGHVG 408
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 109/267 (40%), Positives = 154/267 (57%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G + E+L E+VE L P++Y+ LG PP+GVLL G PGTGKT
Sbjct: 167 QVEEKPD-VTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKT 225
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDAV +
Sbjct: 226 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGA 285
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG+ ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 286 RFDDGQG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 342
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
V PD GR ILK+H K++ + +DI +A + TG R
Sbjct: 343 VEFALPDLAGRAHILKIHA--KQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIR 400
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ V + DF+ A+ + + G K +A
Sbjct: 401 ARRKVATEKDFLEAINKVVKGYAKFSA 427
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 109/267 (40%), Positives = 154/267 (57%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G + E+L E+VE L P++Y+ LG PP+GVLL G PGTGKT
Sbjct: 167 QVEEKPD-VTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKT 225
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDAV +
Sbjct: 226 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGA 285
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG+ ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 286 RFDDGQG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 342
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
V PD GR ILK+H K++ + +DI +A + TG R
Sbjct: 343 VEFALPDLAGRAHILKIHA--KQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIR 400
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ V + DF+ A+ + + G K +A
Sbjct: 401 ARRKVATEKDFLEAINKVVKGYAKFSA 427
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 488 (176.8 bits), Expect = 6.3e-45, P = 6.3e-45
Identities = 94/221 (42%), Positives = 145/221 (65%)
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
V E +T T++D+ G+ K EL+E+V++ + P+KY++ G +P RGVL G PG GKTL
Sbjct: 474 VVETPNT-TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTL 532
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LAKA+A E + FIS E + ++ G + VRD+F +A+ AP ++F DE+D++AK+R
Sbjct: 533 LAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR 592
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
G ++ +NQ+LTEMDG ++ V ++GATNR D++DPA+ RPGR D+++ +
Sbjct: 593 GGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYI 652
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD+ R ILK S ++ PL+KD+DL +A T GF+G
Sbjct: 653 PLPDEASRHQILKA--SLRKTPLSKDLDLTFLAKNTVGFSG 691
Score = 406 (148.0 bits), Expect = 6.6e-35, P = 6.6e-35
Identities = 93/220 (42%), Positives = 132/220 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + I + D+ GV + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 202 ESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIA 261
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F +K P+I+FIDEIDA+A R+
Sbjct: 262 RAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREK 321
Query: 443 RFRIVSNDEREQTL-NQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
+N E E+ + +QLLT MDG S ++V+ ATNR + +D ALRR GRFDR + +
Sbjct: 322 -----TNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIG 376
Query: 502 TPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD +GR IL++H K + LA D+DL IA+ GF G
Sbjct: 377 IPDAVGRLEILRIHT--KNMKLADDVDLEQIANECHGFVG 414
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 488 (176.8 bits), Expect = 6.3e-45, P = 6.3e-45
Identities = 94/221 (42%), Positives = 145/221 (65%)
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
V E +T T++D+ G+ K EL+E+V++ + P+KY++ G +P RGVL G PG GKTL
Sbjct: 474 VVETPNT-TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTL 532
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LAKA+A E + FIS E + ++ G + VRD+F +A+ AP ++F DE+D++AK+R
Sbjct: 533 LAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR 592
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
G ++ +NQ+LTEMDG ++ V ++GATNR D++DPA+ RPGR D+++ +
Sbjct: 593 GGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYI 652
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD+ R ILK S ++ PL+KD+DL +A T GF+G
Sbjct: 653 PLPDEASRHQILKA--SLRKTPLSKDLDLTFLAKNTVGFSG 691
Score = 406 (148.0 bits), Expect = 6.6e-35, P = 6.6e-35
Identities = 93/220 (42%), Positives = 132/220 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + I + D+ GV + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 202 ESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIA 261
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F +K P+I+FIDEIDA+A R+
Sbjct: 262 RAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREK 321
Query: 443 RFRIVSNDEREQTL-NQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
+N E E+ + +QLLT MDG S ++V+ ATNR + +D ALRR GRFDR + +
Sbjct: 322 -----TNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIG 376
Query: 502 TPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD +GR IL++H K + LA D+DL IA+ GF G
Sbjct: 377 IPDAVGRLEILRIHT--KNMKLADDVDLEQIANECHGFVG 414
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 487 (176.5 bits), Expect = 8.7e-45, P = 8.7e-45
Identities = 91/214 (42%), Positives = 142/214 (66%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+ + D+ G+DE K EL+E+V++ + PDK+++ G P RGVL G PG GKTLLAKA+A
Sbjct: 476 VNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIAN 535
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + F+S E + ++ G + VRD+F +A++ AP I+F DE+D++AK+R G
Sbjct: 536 ECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDA 595
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR D+++ + PD
Sbjct: 596 GG-AADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPS 654
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AIL+ ++ K P+AKD+DL ++ +T GF+G
Sbjct: 655 RTAILRANLRKS--PVAKDVDLMYLSKITEGFSG 686
Score = 403 (146.9 bits), Expect = 7.7e-34, Sum P(2) = 7.7e-34
Identities = 92/219 (42%), Positives = 132/219 (60%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + I + D+ G + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A
Sbjct: 198 ESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVA 257
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K AP+IIFIDE+DA+A R+
Sbjct: 258 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 317
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG + V+V+ ATNR + +D ALRR GRFDR + +
Sbjct: 318 THGEV---ER-RIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGI 373
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD GR IL++H K + L++D+DL I++ T G G
Sbjct: 374 PDSTGRLEILQIHT--KNMKLSEDVDLEQISAETHGHVG 410
Score = 37 (18.1 bits), Expect = 7.7e-34, Sum P(2) = 7.7e-34
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 704 SIATLSSGGIDESGGGVPWGRDQVL 728
SIA GG ++GG +Q+L
Sbjct: 583 SIAKARGGGAGDAGGAADRVINQIL 607
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 444 (161.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 108/263 (41%), Positives = 148/263 (56%)
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
S+Q + +AD+ G+D K+E+ E VE L + Y ++G PPRGVL+ G PG GKT+L
Sbjct: 156 SDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTML 215
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKAVA FI SEFV+ Y+G G VRD+F AK+ AP+IIFIDEIDA+A R
Sbjct: 216 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR- 274
Query: 442 GRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
F + +RE + L +LL +MDGFD N V V+ ATNR+D LDPAL RPGR DR +
Sbjct: 275 --FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIE 332
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
PD+ + I SK + L++++DL D + +G R N
Sbjct: 333 FPLPDRRQKRLIFSTITSK--MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Query: 560 KVVVEKIDFIHAVERSIAGIEKK 582
+ +V DF A + I E++
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQE 413
Score = 49 (22.3 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 217 IQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYE--KMLENQVEF 267
++E ++ K Q+ L P + + P D++ Y K L+ ++EF
Sbjct: 1 MEEIGILVEKIQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEF 53
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 444 (161.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 108/263 (41%), Positives = 148/263 (56%)
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
S+Q + +AD+ G+D K+E+ E VE L + Y ++G PPRGVL+ G PG GKT+L
Sbjct: 156 SDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTML 215
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKAVA FI SEFV+ Y+G G VRD+F AK+ AP+IIFIDEIDA+A R
Sbjct: 216 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR- 274
Query: 442 GRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
F + +RE + L +LL +MDGFD N V V+ ATNR+D LDPAL RPGR DR +
Sbjct: 275 --FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIE 332
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
PD+ + I SK + L++++DL D + +G R N
Sbjct: 333 FPLPDRRQKRLIFSTITSK--MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Query: 560 KVVVEKIDFIHAVERSIAGIEKK 582
+ +V DF A + I E++
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQE 413
Score = 49 (22.3 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 217 IQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYE--KMLENQVEF 267
++E ++ K Q+ L P + + P D++ Y K L+ ++EF
Sbjct: 1 MEEIGILVEKIQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEF 53
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 444 (161.4 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 108/263 (41%), Positives = 148/263 (56%)
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
S+Q + +AD+ G+D K+E+ E VE L + Y ++G PPRGVL+ G PG GKT+L
Sbjct: 156 SDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTML 215
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKAVA FI SEFV+ Y+G G VRD+F AK+ AP+IIFIDEIDA+A R
Sbjct: 216 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR- 274
Query: 442 GRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
F + +RE + L +LL +MDGFD N V V+ ATNR+D LDPAL RPGR DR +
Sbjct: 275 --FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIE 332
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
PD+ + I SK + L++++DL D + +G R N
Sbjct: 333 FPLPDRRQKRLIFSTITSK--MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Query: 560 KVVVEKIDFIHAVERSIAGIEKK 582
+ +V DF A + I E++
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQE 413
Score = 47 (21.6 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 217 IQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYE--KMLENQVEF 267
++E ++ K Q+ L P + + P D++ Y K L+ ++EF
Sbjct: 1 MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEF 53
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 444 (161.4 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 108/263 (41%), Positives = 148/263 (56%)
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
S+Q + +AD+ G+D K+E+ E VE L + Y ++G PPRGVL+ G PG GKT+L
Sbjct: 156 SDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTML 215
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKAVA FI SEFV+ Y+G G VRD+F AK+ AP+IIFIDEIDA+A R
Sbjct: 216 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR- 274
Query: 442 GRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
F + +RE + L +LL +MDGFD N V V+ ATNR+D LDPAL RPGR DR +
Sbjct: 275 --FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIE 332
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
PD+ + I SK + L++++DL D + +G R N
Sbjct: 333 FPLPDRRQKRLIFSTITSK--MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Query: 560 KVVVEKIDFIHAVERSIAGIEKK 582
+ +V DF A + I E++
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQE 413
Score = 47 (21.6 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 217 IQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYE--KMLENQVEF 267
++E ++ K Q+ L P + + P D++ Y K L+ ++EF
Sbjct: 1 MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEF 53
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 444 (161.4 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 108/263 (41%), Positives = 148/263 (56%)
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
S+Q + +AD+ G+D K+E+ E VE L + Y ++G PPRGVL+ G PG GKT+L
Sbjct: 156 SDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTML 215
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKAVA FI SEFV+ Y+G G VRD+F AK+ AP+IIFIDEIDA+A R
Sbjct: 216 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR- 274
Query: 442 GRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
F + +RE + L +LL +MDGFD N V V+ ATNR+D LDPAL RPGR DR +
Sbjct: 275 --FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIE 332
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
PD+ + I SK + L++++DL D + +G R N
Sbjct: 333 FPLPDRRQKRLIFSTITSK--MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Query: 560 KVVVEKIDFIHAVERSIAGIEKK 582
+ +V DF A + I E++
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQE 413
Score = 47 (21.6 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 217 IQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYE--KMLENQVEF 267
++E ++ K Q+ L P + + P D++ Y K L+ ++EF
Sbjct: 1 MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEF 53
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 444 (161.4 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 108/263 (41%), Positives = 148/263 (56%)
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
S+Q + +AD+ G+D K+E+ E VE L + Y ++G PPRGVL+ G PG GKT+L
Sbjct: 156 SDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTML 215
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKAVA FI SEFV+ Y+G G VRD+F AK+ AP+IIFIDEIDA+A R
Sbjct: 216 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR- 274
Query: 442 GRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
F + +RE + L +LL +MDGFD N V V+ ATNR+D LDPAL RPGR DR +
Sbjct: 275 --FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIE 332
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
PD+ + I SK + L++++DL D + +G R N
Sbjct: 333 FPLPDRRQKRLIFSTITSK--MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Query: 560 KVVVEKIDFIHAVERSIAGIEKK 582
+ +V DF A + I E++
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQE 413
Score = 47 (21.6 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 217 IQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYE--KMLENQVEF 267
++E ++ K Q+ L P + + P D++ Y K L+ ++EF
Sbjct: 1 MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEF 53
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 485 (175.8 bits), Expect = 2.0e-44, P = 2.0e-44
Identities = 97/214 (45%), Positives = 140/214 (65%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+ + D+ G+DE K++L E V++ + P+K+++ G P RGVL G PGTGKT+LAKAVA
Sbjct: 493 VRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 552
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E FIS E + ++ G S +RD+F +A+ AP I+F+DE+D++AK+R G
Sbjct: 553 ECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDA 612
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQLLTEMDG S V V+GATNR + LDPAL RPGR D ++ V PD++G
Sbjct: 613 GGAS-DRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELG 671
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R +ILK + K P++ D+DL IA+ T GF+G
Sbjct: 672 RLSILKAQLRKT--PVSDDVDLQYIANKTHGFSG 703
Score = 420 (152.9 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 94/215 (43%), Positives = 131/215 (60%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+ + D+ G + ++ E+VE LR P + +G +PPRGVLL G PGTGKTL+A+AVA
Sbjct: 219 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVAN 278
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E F + E + G S +R F A+K +P+IIFIDEID++A R+
Sbjct: 279 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK----- 333
Query: 448 SNDEREQ-TLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKI 506
+N E E+ ++QLLT MDG + S V+V+ ATNR + +DPALRR GRFDR V + PD
Sbjct: 334 TNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPT 393
Query: 507 GREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
GR IL++H K + L D+DL IA+ T G+ G
Sbjct: 394 GRLEILQIHT--KNMKLGDDVDLEQIAAETHGYVG 426
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 464 (168.4 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 109/267 (40%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D IT+ DV G E E+L E+VE L P+K++ LG PP+GVL+ G PGTGKT
Sbjct: 160 QVEEKPD-ITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKT 218
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + F+ SE V+ YVG GA VRDLF A+ + IIF DE+DA+ +
Sbjct: 219 LCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGA 278
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 279 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRK 335
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
V PD GR I +H K + A+DI +A + TG R
Sbjct: 336 VEFGLPDLEGRAHIFTIHA--KTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIR 393
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ VV + DF+ A+++ I K +A
Sbjct: 394 ARRKVVSEKDFLEAIDKVIKSYAKFSA 420
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 462 (167.7 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 106/260 (40%), Positives = 151/260 (58%)
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
V E+ D +T++DV G E E+L E+VE L SP+++++LG PP+G+LL G PGTGKTL
Sbjct: 177 VEEKPD-VTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTL 235
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
A+AVA + FI SE V+ YVG GA VR+LF A+ + IIF DE+DA+ +R
Sbjct: 236 CARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGAR 295
Query: 441 --DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVV 498
DG ++E ++T+ +L+T++DGFD + V+ ATNR + LDPAL RPGR DR V
Sbjct: 296 FDDGAG---GDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKV 352
Query: 499 MVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
PD GR I ++H K + + KDI I+ + TG R
Sbjct: 353 EFSLPDLEGRANIFRIH--SKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRA 410
Query: 559 NKVVVEKIDFIHAVERSIAG 578
+ V + DF+ AV++ I G
Sbjct: 411 RRKVANEKDFLKAVDKVIKG 430
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 461 (167.3 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 108/264 (40%), Positives = 152/264 (57%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T+ DV G E E L E+VE L SP+++++LG PP+G++L G PGTGKT
Sbjct: 169 QVEEKPD-VTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKT 227
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + IIF DEIDA+ +
Sbjct: 228 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGA 287
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+T++DGFD + VL ATNR + LD AL RPGR DR
Sbjct: 288 RFDDGAG---GDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRK 344
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
V PD GR IL++H K + + KDI IA + TG R
Sbjct: 345 VEFGLPDLEGRAHILRIHA--KSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIR 402
Query: 558 LNKVVVEKIDFIHAVERSIAGIEK 581
+ V + DF+ AV++ + G +K
Sbjct: 403 ARRRVATEKDFLDAVQKVVKGNQK 426
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 445 (161.7 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 104/268 (38%), Positives = 159/268 (59%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
KV + D+ T+ + G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKT
Sbjct: 151 KVEKVPDS-TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
LLA+AVA + FI S SE V+ Y+G G+ VR+LF A++ APSIIF+DEID++ +
Sbjct: 210 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269
Query: 440 RDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
R + E ++T+ +LL ++DGF++++ + VL ATNR D+LD AL RPGR DR +
Sbjct: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 329
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
P++ R ILK+H S+K + L + IDL IA G +G R
Sbjct: 330 FPNPNEESRFDILKIH-SRK-MNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER 387
Query: 560 KVVVEKIDFIHAVERSIAGIEKKTAKLK 587
+V V + DF AV + + +K L+
Sbjct: 388 RVHVTQEDFEMAVAKVMKKDTEKNMSLR 415
Score = 37 (18.1 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 3 SIEFLRSTIHNRFLYANSSYNLH 25
SI+ + T R N SY LH
Sbjct: 114 SIDITKITPSTRVALRNDSYVLH 136
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 445 (161.7 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 104/268 (38%), Positives = 159/268 (59%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
KV + D+ T+ + G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKT
Sbjct: 151 KVEKVPDS-TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
LLA+AVA + FI S SE V+ Y+G G+ VR+LF A++ APSIIF+DEID++ +
Sbjct: 210 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269
Query: 440 RDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
R + E ++T+ +LL ++DGF++++ + VL ATNR D+LD AL RPGR DR +
Sbjct: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 329
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
P++ R ILK+H S+K + L + IDL IA G +G R
Sbjct: 330 FPNPNEESRFDILKIH-SRK-MNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER 387
Query: 560 KVVVEKIDFIHAVERSIAGIEKKTAKLK 587
+V V + DF AV + + +K L+
Sbjct: 388 RVHVTQEDFEMAVAKVMKKDTEKNMSLR 415
Score = 37 (18.1 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 3 SIEFLRSTIHNRFLYANSSYNLH 25
SI+ + T R N SY LH
Sbjct: 114 SIDITKLTPSTRVALRNDSYVLH 136
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 479 (173.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 97/214 (45%), Positives = 138/214 (64%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ DV G+DE KEEL+E VE+ + PD+Y + G P +GVL G PGTGKTLLAKAVA
Sbjct: 484 VTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVAT 543
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E FIS E + ++ G S +RD+F +A+ AP+++F+DE+D++AK+R G
Sbjct: 544 EVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDA 603
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQLLTEMDG ++ V V+GATNR D +DPA+ RPGR D+++ V PD+
Sbjct: 604 GGAS-DRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENA 662
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R +IL + K PL ++L IA T GF+G
Sbjct: 663 RLSILNAQLRKT--PLEPGLELTAIAKATQGFSG 694
Score = 424 (154.3 bits), Expect = 6.6e-37, P = 6.6e-37
Identities = 94/215 (43%), Positives = 132/215 (61%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+ + D+ G + ++ E+VE LR P + +G +PPRGVL+ G PGTGKTL+A+AVA
Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E F + E + G S +R F A+K AP+IIFIDEID++A RD
Sbjct: 271 ETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDK----- 325
Query: 448 SNDEREQ-TLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKI 506
+N E E+ ++QLLT MDG + S V+V+ ATNR + +DPALRR GRFDR V + PD
Sbjct: 326 TNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDAT 385
Query: 507 GREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
GR +L++H K + LA D+DL +A+ T G+ G
Sbjct: 386 GRLEVLRIHT--KNMKLADDVDLEALAAETHGYVG 418
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 460 (167.0 bits), Expect = 1.9e-43, P = 1.9e-43
Identities = 107/267 (40%), Positives = 152/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V ++ D +T++DV G E E+L E+VE L P+K++ LG PP+GVLL G PGTGKT
Sbjct: 165 QVEDKPD-VTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGA 283
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 284 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
V PD+ GR I K+H + + + +DI +A + TG R
Sbjct: 341 VEFGLPDQDGRSHIFKIHA--RSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIR 398
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ V + DF+ AV++ I K +A
Sbjct: 399 ARRKVATEKDFLEAVKKVIKSYAKFSA 425
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 443 (161.0 bits), Expect = 2.7e-43, Sum P(2) = 2.7e-43
Identities = 99/254 (38%), Positives = 145/254 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T ++AD+ G++ +E+ E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 196 DKAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLA 255
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR +F A + APSI+FIDEIDA+ R
Sbjct: 256 KAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKR-- 313
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFD V V+ ATN+ + LDPAL RPGR DR ++
Sbjct: 314 -YDSTSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILF 372
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
E PD+ ++ I +H SK + L D+DL + + +G R +
Sbjct: 373 ENPDQNTKKKIFTLHTSK--MSLGDDVDLDEFINQKDDLSGADIRAICTEAGLMALRERR 430
Query: 561 VVVEKIDFIHAVER 574
+ V+ DF A ER
Sbjct: 431 MRVQMDDFRAARER 444
Score = 37 (18.1 bits), Expect = 2.7e-43, Sum P(2) = 2.7e-43
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 29 FCHSRCRVYYHNTYRFASHAIL 50
F SRC++ Y R H +L
Sbjct: 57 FPTSRCKLRYLRMQRVHDHLLL 78
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 477 (173.0 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 95/214 (44%), Positives = 139/214 (64%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+D K EL+E VE+ + PD+Y + G P +GVL G PGTGKTLLAKAVA
Sbjct: 485 VTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVAT 544
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E FIS E + ++ G S +RD+F +A+ AP+++F+DE+D++AK+R G
Sbjct: 545 EVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDA 604
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQLLTEMDG ++ V V+GATNR D +DPAL RPGR D+++ V PD+
Sbjct: 605 GGAS-DRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPA 663
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R +IL+ + + PL +DL +IA +T GF+G
Sbjct: 664 RLSILQAQL--RNTPLEPGLDLNEIAKITHGFSG 695
Score = 429 (156.1 bits), Expect = 1.7e-37, P = 1.7e-37
Identities = 95/215 (44%), Positives = 132/215 (61%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+ + D+ G + ++ E+VE LR P + +G +PP+G+L+ G PGTGKT++A+AVA
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E F + E + G S +R F A+K +PSIIFIDEID++A RD
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDK----- 326
Query: 448 SNDEREQ-TLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKI 506
+N E E+ ++QLLT MDG + S V+V+ ATNR + +DPALRR GRFDR V + PD
Sbjct: 327 TNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAE 386
Query: 507 GREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
GR IL++H K + LA D+DL IAS T GF G
Sbjct: 387 GRLEILRIHT--KNMKLADDVDLEAIASETHGFVG 419
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 477 (173.0 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 95/214 (44%), Positives = 139/214 (64%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+ D+ G+D K EL+E VE+ + PD+Y + G P +GVL G PGTGKTLLAKAVA
Sbjct: 485 VTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVAT 544
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E FIS E + ++ G S +RD+F +A+ AP+++F+DE+D++AK+R G
Sbjct: 545 EVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDA 604
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQLLTEMDG ++ V V+GATNR D +DPAL RPGR D+++ V PD+
Sbjct: 605 GGAS-DRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPA 663
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R +IL+ + + PL +DL +IA +T GF+G
Sbjct: 664 RLSILQAQL--RNTPLEPGLDLNEIAKITHGFSG 695
Score = 429 (156.1 bits), Expect = 1.7e-37, P = 1.7e-37
Identities = 95/215 (44%), Positives = 132/215 (61%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+ + D+ G + ++ E+VE LR P + +G +PP+G+L+ G PGTGKT++A+AVA
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E F + E + G S +R F A+K +PSIIFIDEID++A RD
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDK----- 326
Query: 448 SNDEREQ-TLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKI 506
+N E E+ ++QLLT MDG + S V+V+ ATNR + +DPALRR GRFDR V + PD
Sbjct: 327 TNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAE 386
Query: 507 GREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
GR IL++H K + LA D+DL IAS T GF G
Sbjct: 387 GRLEILRIHT--KNMKLADDVDLEAIASETHGFVG 419
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 432 (157.1 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 105/263 (39%), Positives = 147/263 (55%)
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
S+Q + ++D+ G+D K+E+ E VE L + Y ++G PPRGVL+ G PG GKT+L
Sbjct: 156 SDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTML 215
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKAVA FI SEFV+ Y+G G VRD+F AK+ AP+IIFIDEIDA+A R
Sbjct: 216 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR- 274
Query: 442 GRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
F + +RE + L +LL +MDGFD N V V+ ATNR+D LDPAL PGR DR +
Sbjct: 275 --FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIE 332
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
PD+ + + SK + L++++DL D + +G R N
Sbjct: 333 FPLPDRRQKRLVFSTITSK--MNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVREN 390
Query: 560 KVVVEKIDFIHAVERSIAGIEKK 582
+ +V DF A + I E++
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQE 413
Score = 49 (22.3 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 217 IQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYE--KMLENQVEF 267
+++ V+ K Q+ L + P + + P D++ Y K L+ ++EF
Sbjct: 1 MEDGGVLVEKPQDDVPALLNSRPQTGLSFLAPEPEDLEDLYSIYKKLQQELEF 53
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 458 (166.3 bits), Expect = 3.3e-43, P = 3.3e-43
Identities = 106/260 (40%), Positives = 149/260 (57%)
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
V ++ D +T+ DV G E E+L E+VE L SP++++ LG PP+G LL G PGTGKTL
Sbjct: 176 VEDKPD-VTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTL 234
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
A+AVA + FI SE V+ YVG GA VR+LF A+ + IIF DEIDAV +R
Sbjct: 235 CARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGAR 294
Query: 441 --DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVV 498
DG ++E ++T+ +L+T++DGFD+ + V+ ATNR LDPAL RPGR DR +
Sbjct: 295 FDDGAG---GDNEVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRKI 351
Query: 499 MVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
PD GR IL++H K + + +DI I+ + TG R
Sbjct: 352 EFSLPDVEGRANILRIHA--KSMSVERDIRWELISRLCPNATGAELRSVATEAGMFAIRA 409
Query: 559 NKVVVEKIDFIHAVERSIAG 578
+ V + DF+ AV++ I G
Sbjct: 410 RRKVATEKDFLAAVDKVIKG 429
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 457 (165.9 bits), Expect = 4.3e-43, P = 4.3e-43
Identities = 106/267 (39%), Positives = 151/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 165 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 284 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR ILK+H + + + +DI +A + TG R
Sbjct: 341 IEFSLPDLEGRTHILKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 399 ARRKIATEKDFLEAVNKVIKSYAKFSA 425
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 475 (172.3 bits), Expect = 4.8e-43, P = 4.8e-43
Identities = 92/221 (41%), Positives = 143/221 (64%)
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
V E +T T++D+ G+ K EL+E+V++ + P+KY++ G +P RGVL G PG GKTL
Sbjct: 473 VVETPNT-TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTL 531
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LAKA+A E + FIS E + ++ G + VRD+F +A+ AP ++F DE+D++AK+R
Sbjct: 532 LAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR 591
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
G ++ +NQ+LTEMDG ++ V ++GATNR D++DPA+ RPGR D+++ +
Sbjct: 592 GGSVGDAGG-AADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYI 650
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD+ R I K S ++ PL+ D+DL +A T GF+G
Sbjct: 651 PLPDEASRLQIFKA--SLRKTPLSADLDLNFLAKNTVGFSG 689
Score = 410 (149.4 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 87/214 (40%), Positives = 131/214 (61%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+ + D+ GV + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A+AVA
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVAN 265
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E F + E + G S +R FA +K +P+I+FIDEIDA+A R+
Sbjct: 266 ETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREK----A 321
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ ++ ++QLLT MDG + + V+V+ ATNR + +D ALRR GRFDR + + PD +G
Sbjct: 322 HGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 381
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R IL++H K + L +D+DL +A+ GF G
Sbjct: 382 RLEILRIHT--KNMKLGEDVDLEQVANECHGFVG 413
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 475 (172.3 bits), Expect = 4.8e-43, P = 4.8e-43
Identities = 92/221 (41%), Positives = 143/221 (64%)
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
V E +T T++D+ G+ K EL+E+V++ + P+KY++ G +P RGVL G PG GKTL
Sbjct: 473 VVETPNT-TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTL 531
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LAKA+A E + FIS E + ++ G + VRD+F +A+ AP ++F DE+D++AK+R
Sbjct: 532 LAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR 591
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
G ++ +NQ+LTEMDG ++ V ++GATNR D++DPA+ RPGR D+++ +
Sbjct: 592 GGSVGDAGG-AADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYI 650
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD+ R I K S ++ PL+ D+DL +A T GF+G
Sbjct: 651 PLPDEASRLQIFKA--SLRKTPLSADLDLNFLAKNTVGFSG 689
Score = 410 (149.4 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 87/214 (40%), Positives = 131/214 (61%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+ + D+ GV + +++E+VE LR P + +G +PPRG+LL G PGTGKTL+A+AVA
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVAN 265
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E F + E + G S +R FA +K +P+I+FIDEIDA+A R+
Sbjct: 266 ETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREK----A 321
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ ++ ++QLLT MDG + + V+V+ ATNR + +D ALRR GRFDR + + PD +G
Sbjct: 322 HGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 381
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R IL++H K + L +D+DL +A+ GF G
Sbjct: 382 RLEILRIHT--KNMKLGEDVDLEQVANECHGFVG 413
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 474 (171.9 bits), Expect = 6.8e-43, P = 6.8e-43
Identities = 118/316 (37%), Positives = 170/316 (53%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+ + D+ G++E K EL E V++ + P+K+ + G P RGVL G PGTGKT+LAKAVA
Sbjct: 496 VRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 555
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E FIS E + ++ G S +RD+F +A+ AP ++F+DE+D++AKSR G
Sbjct: 556 ECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDA 615
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ +NQLLTEMDG S V V+GATNR + LD AL RPGR D +V V PD+
Sbjct: 616 GGAS-DRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQAS 674
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
RE ILK + K P+A D+D+ IAS T GF+G + + + +I+
Sbjct: 675 REGILKAQLRKT--PVASDVDIEFIASKTHGFSGADLGFVTQRAVKLA--IKESISAEIE 730
Query: 568 FIHAVERSIAGIEKKTAKLKGSEKAVVARHEAG-HAVVGTAVASLLPGQ-PRVEKLS-IL 624
+R AG + K + E V A + TA S+ + R E + L
Sbjct: 731 --RQKQREAAGEDVKMEDEEEGEDPVPELTRAHFEEAMKTARRSVSDVEIRRYEAFAQSL 788
Query: 625 PRTGGALGFTYTPANE 640
+GG+ F + ANE
Sbjct: 789 KNSGGSSFFRFPSANE 804
Score = 418 (152.2 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 92/215 (42%), Positives = 131/215 (60%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+ + D+ G + ++ E+VE LR P + +G +PPRG+L+ G PGTGKTL+A+AVA
Sbjct: 222 VGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 281
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E F + E + G S +R F A+K +P+IIFIDEID++A R+
Sbjct: 282 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK----- 336
Query: 448 SNDEREQ-TLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKI 506
+N E E+ ++QLLT MDG + S V+V+ ATNR + +DPALRR GRFDR V + PD
Sbjct: 337 TNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPT 396
Query: 507 GREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
GR IL +H K + L +D+DL IA+ T G+ G
Sbjct: 397 GRLEILSIHT--KNMKLGEDVDLETIAAETHGYVG 429
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 455 (165.2 bits), Expect = 7.4e-43, P = 7.4e-43
Identities = 108/261 (41%), Positives = 153/261 (58%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
EQG+ ITF + G+ E EL E++E L++P+ + R+G +PP+GVLL G PGTGKTLLA
Sbjct: 174 EQGE-ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLA 232
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA FI AS V+ Y+G A +R++FA AK+ P IIF+DE+DA+ R
Sbjct: 233 KAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIG-GR-- 289
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LLT+MDGFD+ ++ ATNR D LDPAL RPGR DR V +
Sbjct: 290 RFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEI 349
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
P++ GR I K+H +K + + D M+ GF G R ++
Sbjct: 350 PLPNEAGRLEIFKIHTAK--VKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDR 407
Query: 561 VVVEKIDFIHAVERSIAGIEK 581
+ D + AV R +A ++K
Sbjct: 408 DHINPDDLMKAV-RKVAEVKK 427
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 454 (164.9 bits), Expect = 9.6e-43, P = 9.6e-43
Identities = 106/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 165 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 284 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 341 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ V + DF+ AV + I K +A
Sbjct: 399 ARRKVATEKDFLEAVNKVIKSYAKFSA 425
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 454 (164.9 bits), Expect = 9.6e-43, P = 9.6e-43
Identities = 103/263 (39%), Positives = 157/263 (59%)
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
+ + GD I+FA V G++E EL E++E L++P+ ++R+G +PP+GVLL G PGTGKTL
Sbjct: 123 IEDPGD-ISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTL 181
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LA+AVA V F+ +S V+ Y+G A +R++F AK+ P +IF+DEIDA+ R
Sbjct: 182 LARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIG-GR 240
Query: 441 DGRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVV 498
RF ++ +RE +TL +LL +MDGFD ++ ATNR D LDPAL RPGR DR +
Sbjct: 241 --RFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKI 298
Query: 499 MVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
+ P+++GR ILK+H+ K + +ID + +T G G +
Sbjct: 299 EIPLPNEVGRMEILKIHLEK--VSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKE 356
Query: 559 NKVVVEKIDFIHAVERSIAGIEK 581
++ V + D + A R +A ++K
Sbjct: 357 DRDYVIQSDLMSAA-RKVADLKK 378
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 156 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 214
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 215 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 274
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 275 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 331
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 332 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 389
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 390 ARRKIATEKDFLEAVNKVIKSYAKFSA 416
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 164 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 222
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 223 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 282
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 283 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 339
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 340 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 397
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 398 ARRKIATEKDFLEAVNKVIKSYAKFSA 424
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 165 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 284 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 341 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 399 ARRKIATEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 165 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 284 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 341 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 399 ARRKIATEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 28 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 86
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 87 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 146
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 147 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 203
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 204 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 261
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 262 ARRKIATEKDFLEAVNKVIKSYAKFSA 288
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 165 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 284 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 341 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 399 ARRKIATEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 207 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 265
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 266 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 325
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 326 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 382
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 383 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 440
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 441 ARRKIATEKDFLEAVNKVIKSYAKFSA 467
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 166 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 224
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 225 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 284
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 285 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 341
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 342 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 399
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 400 ARRKIATEKDFLEAVNKVIKSYAKFSA 426
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 165 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 284 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 341 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 399 ARRKIATEKDFLEAVNKVIKSYAKFSA 425
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 165 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 284 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 341 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 399 ARRKIATEKDFLEAVNKVIKSYAKFSA 425
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 165 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 224 LCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 284 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 341 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 399 ARRKIATEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 165 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 224 LCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 284 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 341 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 399 ARRKIATEKDFLEAVNKVIKSYAKFSA 425
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/269 (39%), Positives = 152/269 (56%)
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
V E+ D +T+ DV G E E++ E+VE + P+K+++LG PP+GVL G PGTGKTL
Sbjct: 159 VEEKPD-VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LA+AVA + FI SE V+ YVG GA VR+LF A+ + I+F DE+DA+ +R
Sbjct: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
Query: 441 --DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVV 498
DG + ++E ++T+ +++ ++DGFD+ + VL ATNR D LDPAL RPGR DR V
Sbjct: 278 FDDG---VGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
Query: 499 MVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
PD R I K+H + + +DI +A + TG R
Sbjct: 335 EFGLPDLESRTQIFKIHT--RTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRA 392
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKLK 587
+ V + DF+ AV + I G +K +A K
Sbjct: 393 RRKTVTEKDFLDAVNKVIKGYQKFSATPK 421
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 453 (164.5 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 105/267 (39%), Positives = 150/267 (56%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+V E+ D +T++DV G E E+L E+VE L P++++ LG PP+GVLL G PGTGKT
Sbjct: 165 QVEEKPD-VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
L A+AVA + FI SE V+ YVG GA VR+LF A+ + +IF DEIDA+ +
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 440 R--DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R DG ++E ++T+ +L+ ++DGFD + VL ATNR D LDPAL RPGR DR
Sbjct: 284 RFDDGAG---GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD GR I K+H + + + +DI +A + TG R
Sbjct: 341 IEFSLPDLEGRTHIFKIHA--RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
Query: 558 LNKVVVEKIDFIHAVERSIAGIEKKTA 584
+ + + DF+ AV + I K +A
Sbjct: 399 ARRKIATEKDFLEAVNKVIKSYAKFSA 425
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 451 (163.8 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 106/263 (40%), Positives = 151/263 (57%)
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
V E+ D +T++DV G + E+L E+VE L SP+++ LG PP+G+LL G PGTGKTL
Sbjct: 200 VEEKPD-VTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTL 258
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
A+AVA + FI SE V+ YVG GA VR+LF A+ + IIF DEIDAV +R
Sbjct: 259 CARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGAR 318
Query: 441 --DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVV 498
DG ++E ++T+ +L+T++DGFD + V+ ATNR + LDPAL RPGR DR V
Sbjct: 319 FDDGAG---GDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKV 375
Query: 499 MVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
PD GR I ++H K + + + I I+ + TG R
Sbjct: 376 EFSLPDLEGRANIFRIH--SKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRA 433
Query: 559 NKVVVEKIDFIHAVERSIAGIEK 581
+ V + DF+ AV++ I+G +K
Sbjct: 434 RRKVATEKDFLKAVDKVISGYKK 456
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 451 (163.8 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 103/260 (39%), Positives = 155/260 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ V G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 157 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHH 216
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-DGRFRIV 447
E FI S SE V+ ++G GA VR+LF A++ APSIIF+DEID++ SR +G
Sbjct: 217 TECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSG-- 274
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LDPAL RPGR DR + PD+
Sbjct: 275 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKA 334
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R ILK+H S+K + L + I++ IA G +G R ++ V + D
Sbjct: 335 RADILKIH-SRK-MNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQED 392
Query: 568 FIHAVERSIAGIEKKTAKLK 587
F AV + + +K +K
Sbjct: 393 FEMAVGKVMQKDSEKNMSIK 412
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 427 (155.4 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 104/270 (38%), Positives = 154/270 (57%)
Query: 321 KVS-EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGK 378
K+S E I+++DV G+ E EL E+VE L +P+ + R+G PP+G LL G PGTGK
Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGK 197
Query: 379 TLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAK 438
TLLA+AVA + + F+ +S V+ Y+G A +R++F A+ P I+F+DEIDA+
Sbjct: 198 TLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIG- 256
Query: 439 SRDGRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDR 496
R RF ++ +RE +TL +LL ++DGFDS V V+ ATNR D LDPAL RPGR DR
Sbjct: 257 GR--RFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDR 314
Query: 497 VVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXG 556
+ + P++ R ILK+H +K + +ID + ++ GF+
Sbjct: 315 KIEIGLPNEQSRLEILKIHSNK--ITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAI 372
Query: 557 RLNKVVVEKIDFIHAVERSIAGIEKKTAKL 586
R + V DF+ AV R + ++ KL
Sbjct: 373 RAEREFVIDEDFMKAV-RKVGDAKRLETKL 401
Score = 46 (21.3 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 210 KLKNDGSIQESEVITNKFQESESLLKSVTPTKRIV 244
KLK D +ESE+ T +F +SE+ +KS+ +IV
Sbjct: 42 KLK-DLRKKESEM-TKQFDKSENDIKSLQSVGQIV 74
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 427 (155.4 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 104/270 (38%), Positives = 154/270 (57%)
Query: 321 KVS-EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGK 378
K+S E I+++DV G+ E EL E+VE L +P+ + R+G PP+G LL G PGTGK
Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGK 197
Query: 379 TLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAK 438
TLLA+AVA + + F+ +S V+ Y+G A +R++F A+ P I+F+DEIDA+
Sbjct: 198 TLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIG- 256
Query: 439 SRDGRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDR 496
R RF ++ +RE +TL +LL ++DGFDS V V+ ATNR D LDPAL RPGR DR
Sbjct: 257 GR--RFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDR 314
Query: 497 VVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXG 556
+ + P++ R ILK+H +K + +ID + ++ GF+
Sbjct: 315 KIEIGLPNEQSRLEILKIHSNK--ITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAI 372
Query: 557 RLNKVVVEKIDFIHAVERSIAGIEKKTAKL 586
R + V DF+ AV R + ++ KL
Sbjct: 373 RAEREFVIDEDFMKAV-RKVGDAKRLETKL 401
Score = 46 (21.3 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 210 KLKNDGSIQESEVITNKFQESESLLKSVTPTKRIV 244
KLK D +ESE+ T +F +SE+ +KS+ +IV
Sbjct: 42 KLK-DLRKKESEM-TKQFDKSENDIKSLQSVGQIV 74
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 448 (162.8 bits), Expect = 4.8e-42, P = 4.8e-42
Identities = 104/255 (40%), Positives = 151/255 (59%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
KV + D+ T+ V G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKT
Sbjct: 135 KVEKIPDS-TYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 193
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
LLA+AVA + FI S SE V+ Y+G G+ VR+LF A++ APSIIF+DEID++ S
Sbjct: 194 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSS 253
Query: 440 RDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
R + E ++T+ +LL ++DGF+S + VL TNR D+LDPAL RPGR DR +
Sbjct: 254 RGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIE 313
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
P GR ILK+H S+K + L + I+L I+ G +G R
Sbjct: 314 FPNPGDAGRLDILKIH-SRK-MNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRER 371
Query: 560 KVVVEKIDFIHAVER 574
+V V + DF AV +
Sbjct: 372 RVHVSQEDFEMAVSK 386
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 466 (169.1 bits), Expect = 5.9e-42, P = 5.9e-42
Identities = 90/215 (41%), Positives = 141/215 (65%)
Query: 328 TITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVA 386
T T+ D+ G++ K EL E V++ + P+K+ + G +P +GVL G PG GKTLLAKA+A
Sbjct: 471 TTTWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIA 530
Query: 387 GEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRI 446
E + FIS E + ++ G + VR+LF +A++ AP ++F DE+D++A+SR G +
Sbjct: 531 NECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSR-GSSQG 589
Query: 447 VSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKI 506
+ ++ +NQ+LTEMDG ++ V ++GATNR D++DPA+ RPGR D+++ + PD
Sbjct: 590 DAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLP 649
Query: 507 GREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R AILK ++K P+AKD+DL + T GF+G
Sbjct: 650 SRVAILKACLNKS--PVAKDVDLEFLGQKTQGFSG 682
Score = 419 (152.6 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 91/216 (42%), Positives = 132/216 (61%)
Query: 327 DTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAV 385
D + + D+ GV + ++ E+VE LR P + +G +PP+G+LL G PG GKT++A+AV
Sbjct: 197 DEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAV 256
Query: 386 AGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFR 445
A E F + E + G S +R F A+K APSIIFIDEID++A R+ +
Sbjct: 257 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE---K 313
Query: 446 IVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDK 505
ER + ++QLLT MDG S + VIV+GATNR + +DPALRR GRFDR + + PD
Sbjct: 314 TQGEVER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDA 372
Query: 506 IGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
GR I+++H K + L + +DL +A+ T G+ G
Sbjct: 373 TGRLEIMRIHT--KNMKLDETVDLEAVANETHGYVG 406
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 447 (162.4 bits), Expect = 6.3e-42, P = 6.3e-42
Identities = 103/267 (38%), Positives = 153/267 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E I FA + G+++ EL E++E L++P+ + R+G +PP+GVLL G PGTGKTLLA
Sbjct: 129 EDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLA 188
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F+ +S V+ Y+G A +R++F AK+ P IIF+DEIDA+ R
Sbjct: 189 RAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIG-GR-- 245
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL ++DGFD ++ ATNR D LDPAL R GR DR + +
Sbjct: 246 RFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEI 305
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
P+++GR ILK+H S ++ DID + M+ G G + +
Sbjct: 306 PLPNEVGRLEILKIHSSTVQME--GDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYR 363
Query: 561 VVVEKIDFIHAVERSIAGIEKKTAKLK 587
+ + DF AV R +A +K KL+
Sbjct: 364 DAINQDDFNRAV-RKVAEAKKLEGKLE 389
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 446 (162.1 bits), Expect = 8.1e-42, P = 8.1e-42
Identities = 97/251 (38%), Positives = 148/251 (58%)
Query: 324 EQGDTITFADVAGVDEAKEEL-EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T ++D+ G+D+ EEL E +V ++ DK+ LG +PP+G L+ G PGTGKTLLA
Sbjct: 192 DEKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLA 251
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+A A ++ F+ +A + V++++G GA VRD FA AK++AP+IIFIDE+DA+ R
Sbjct: 252 RACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFD 311
Query: 443 RFRIVSND-EREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
+ S D E ++T+ +LL ++DGF S+ V VL ATNR D LDPAL R GR DR +
Sbjct: 312 SDK--SGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLDRKIEFP 369
Query: 502 TPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKV 561
P + RE++LK+H K ++ ++A T F G R K
Sbjct: 370 LPSEEARESVLKIHARKLHCD-NNSVNWRELARSTDEFNGAQLKAVTVEAGMIALRNGKS 428
Query: 562 VVEKIDFIHAV 572
+++ DF+ A+
Sbjct: 429 IIKHEDFVEAI 439
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 446 (162.1 bits), Expect = 8.1e-42, P = 8.1e-42
Identities = 98/221 (44%), Positives = 138/221 (62%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+ADV G+D+ +E++E VE L P+ Y +G RPP+GV+L G PGTGKTLLA
Sbjct: 180 EKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLA 239
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ APSI+FIDEIDAV R
Sbjct: 240 KAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKR-- 297
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V VL ATNR + LDPAL RPGR DR +
Sbjct: 298 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEF 356
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD+ + I ++H S+ + L K+++L + + +G
Sbjct: 357 PLPDEKTKRRIFQIHTSR--MTLGKEVNLEEFITAKDELSG 395
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 445 (161.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 99/254 (38%), Positives = 146/254 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T ++AD+ G++ +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 178 DKSPTESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLA 237
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G R +F A APSI+FIDEIDA+ R
Sbjct: 238 KAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKR-- 295
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFD + V+ ATN+ + LDPAL RPGR DR ++
Sbjct: 296 -YESTSGGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILF 354
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
E PD ++ IL +H SK + LA D++L +I + +G R +
Sbjct: 355 ENPDANTKKKILTIHTSK--MSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERR 412
Query: 561 VVVEKIDFIHAVER 574
+ V+ DF A ER
Sbjct: 413 MQVKAEDFKSAKER 426
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 445 (161.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 108/268 (40%), Positives = 155/268 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E G+ I+F + G+ E EL E++E L++P+ + R+G +PP+GVLL G PGTGKTLLA
Sbjct: 165 EPGE-ISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLA 223
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA FI AS V+ Y+G A +R++FA AK+ P IIF+DE+DA+ R
Sbjct: 224 KAVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIG-GR-- 280
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ ++ ATNR D LDPAL R GR DR + +
Sbjct: 281 RFSEGTSADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEI 340
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
P++ GR I K+H SK +AK + D M+ GF G R
Sbjct: 341 GLPNEAGRLEIFKIHTSK----VAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRD 396
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
++ + + D + AV R +A ++K KL
Sbjct: 397 DRDYILQNDLMKAV-RKVADVKKLEGKL 423
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 445 (161.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 100/262 (38%), Positives = 150/262 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ ++AD+ G++ +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 185 EKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLA 244
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA E F+ SE ++ Y+G G VR++F A++ APSI+FIDEIDAV R
Sbjct: 245 KAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKR-- 302
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR D LDPAL RPGR DR + +
Sbjct: 303 -YEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQL 361
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD + I ++H SK + ++ D+DL + +G R +
Sbjct: 362 PNPDTKTKRRIFQIHTSK--MTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERR 419
Query: 561 VVVEKIDFIHAVERSIAGIEKK 582
+ + + D A ++++ +KK
Sbjct: 420 MKITQADLRKARDKAL--FQKK 439
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 445 (161.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 100/262 (38%), Positives = 150/262 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ ++AD+ G++ +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 185 EKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLA 244
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA E F+ SE ++ Y+G G VR++F A++ APSI+FIDEIDAV R
Sbjct: 245 KAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKR-- 302
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR D LDPAL RPGR DR + +
Sbjct: 303 -YEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQL 361
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD + I ++H SK + ++ D+DL + +G R +
Sbjct: 362 PNPDTKTKRRIFQIHTSK--MTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERR 419
Query: 561 VVVEKIDFIHAVERSIAGIEKK 582
+ + + D A ++++ +KK
Sbjct: 420 MKITQADLRKARDKAL--FQKK 439
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 464 (168.4 bits), Expect = 1.2e-41, P = 1.2e-41
Identities = 93/214 (43%), Positives = 136/214 (63%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+ + D+ G++E K EL E V+ + +K++R G P +GVL G PGTGKTLLAKA+A
Sbjct: 494 VRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIAN 553
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E FIS E + ++ G S VRD+F +A+ AP ++F+DE+D++AK+R
Sbjct: 554 ECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDS 613
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+R +NQLLTEMDG +S V V+GATNR D +DPAL RPGR D+++ V PD+
Sbjct: 614 GGGDR--VVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEA 671
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R +IL+ + + P+A+D+DL +A T GF+G
Sbjct: 672 RFSILQTQL--RHTPVAEDVDLRAVAKATHGFSG 703
Score = 423 (154.0 bits), Expect = 7.8e-37, P = 7.8e-37
Identities = 94/215 (43%), Positives = 131/215 (60%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+ + D+ G ++ E+VE LR P + +G +PPRG+L+ G PGTGKTL+A+AVA
Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E F + E + G S +R F A+K +P+IIFIDEID++A R+
Sbjct: 281 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK----- 335
Query: 448 SNDEREQ-TLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKI 506
+N E E+ ++QLLT MDG + S V+V+ ATNR + +DPALRR GRFDR V V PD
Sbjct: 336 TNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPT 395
Query: 507 GREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
GR IL++H K + LA D+DL IA+ T G+ G
Sbjct: 396 GRLEILRIHT--KNMKLADDVDLEQIAAETHGYVG 428
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 444 (161.4 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 97/251 (38%), Positives = 148/251 (58%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+++E+ + + + D+ G+D K+E++E VE L P+ Y ++G PP G+L+ G PGTGKT
Sbjct: 128 QITERPN-VKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKT 186
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
+L KAVA E +V FI SEFV+ Y+G G VRD+F A++ +PSIIFIDE+DA+A
Sbjct: 187 MLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATK 246
Query: 440 RDGRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R F + +RE + L +LL +MDGFD ++ V V+ ATNR+D LDPAL RPGR DR
Sbjct: 247 R---FDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRK 303
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD+ + I + +SK + ++ D+++ T + R
Sbjct: 304 IEFPLPDRKQKRLIFQTIISK--MNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIR 361
Query: 558 LNKVVVEKIDF 568
N+ ++ DF
Sbjct: 362 KNRYIITANDF 372
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 444 (161.4 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 108/263 (41%), Positives = 148/263 (56%)
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
S+Q + +AD+ G+D K+E+ E VE L + Y ++G PPRGVL+ G PG GKT+L
Sbjct: 155 SDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTML 214
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKAVA FI SEFV+ Y+G G VRD+F AK+ AP+IIFIDEIDA+A R
Sbjct: 215 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR- 273
Query: 442 GRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
F + +RE + L +LL +MDGFD N V V+ ATNR+D LDPAL RPGR DR +
Sbjct: 274 --FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIE 331
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
PD+ + I SK + L++++DL D + +G R N
Sbjct: 332 FPLPDRRQKRLIFSTITSK--MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 389
Query: 560 KVVVEKIDFIHAVERSIAGIEKK 582
+ +V DF A + I E++
Sbjct: 390 RYIVLAKDFEKAYKTVIKKDEQE 412
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 444 (161.4 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 97/251 (38%), Positives = 148/251 (58%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
+++E+ + + + D+ G+D K+E++E VE L P+ Y ++G PP G+L+ G PGTGKT
Sbjct: 128 QITERPN-VKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKT 186
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
+L KAVA E +V FI SEFV+ Y+G G VRD+F A++ +PSIIFIDE+DA+A
Sbjct: 187 MLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATK 246
Query: 440 RDGRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 497
R F + +RE + L +LL +MDGFD ++ V V+ ATNR+D LDPAL RPGR DR
Sbjct: 247 R---FDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRK 303
Query: 498 VMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
+ PD+ + I + +SK + ++ D+++ T + R
Sbjct: 304 IEFPLPDRKQKRLIFQTIISK--MNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIR 361
Query: 558 LNKVVVEKIDF 568
N+ ++ DF
Sbjct: 362 KNRYIITANDF 372
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 444 (161.4 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 108/253 (42%), Positives = 146/253 (57%)
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
+E+ D +T+ADV G+D K+E+ E VE L D Y ++G PPRGVLL G PGTGKT+L
Sbjct: 164 NEKPD-VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTML 222
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
KAVA + FI + SEFV Y+G G VRD+F A++ APSIIFIDE+D++A R
Sbjct: 223 VKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRF 282
Query: 442 GRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
+ S+ E ++ L +LLT+MDGFD ++ V V+ ATNR+D LDPAL RPGR DR +E
Sbjct: 283 DA-QTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDR--KIE 339
Query: 502 TP---DKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
P D+ R I SK + LA + DL + +G R
Sbjct: 340 FPSLRDRRERRLIFGTIASK--MSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRK 397
Query: 559 NKVVVEKIDFIHA 571
N+ V+ + D A
Sbjct: 398 NRYVILQSDLEEA 410
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 443 (161.0 bits), Expect = 1.8e-41, P = 1.8e-41
Identities = 106/256 (41%), Positives = 145/256 (56%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ D I+++D+ G+D K+E+ E VE L Y ++G PPRGVLL G PG GKT+LA
Sbjct: 145 EKPD-ISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLA 203
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA FI SEFV+ Y+G G VRDLF AK+ +PSIIFIDEIDA+A R
Sbjct: 204 KAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKR-- 261
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
F + +RE + L +LL +MDGFD + + V+ ATNR+D LDPAL RPGR DR + +
Sbjct: 262 -FDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIEL 320
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ + + SK + + +D+DL DI + + R N+
Sbjct: 321 PLPDRRQKRLVFTTITSK--MNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENR 378
Query: 561 VVVEKIDFIHAVERSI 576
VV DF + S+
Sbjct: 379 YVVNAKDFEKGYKTSV 394
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 443 (161.0 bits), Expect = 1.8e-41, P = 1.8e-41
Identities = 100/248 (40%), Positives = 143/248 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+AD+ G+D +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ APSI+FIDEIDA+ R
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-- 294
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 295 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ ++ I ++H S+ + LA D+ L D+ +G R +
Sbjct: 354 PLPDEKTKKRIFQIHTSR--MTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 561 VVVEKIDF 568
+ V DF
Sbjct: 412 MKVTNEDF 419
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 443 (161.0 bits), Expect = 1.8e-41, P = 1.8e-41
Identities = 100/248 (40%), Positives = 143/248 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+AD+ G+D +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ APSI+FIDEIDA+ R
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-- 294
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 295 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ ++ I ++H S+ + LA D+ L D+ +G R +
Sbjct: 354 PLPDEKTKKRIFQIHTSR--MTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 561 VVVEKIDF 568
+ V DF
Sbjct: 412 MKVTNEDF 419
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 443 (161.0 bits), Expect = 1.8e-41, P = 1.8e-41
Identities = 100/248 (40%), Positives = 143/248 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+AD+ G+D +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 104 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 163
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ APSI+FIDEIDA+ R
Sbjct: 164 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-- 221
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 222 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 280
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ ++ I ++H S+ + LA D+ L D+ +G R +
Sbjct: 281 PLPDEKTKKRIFQIHTSR--MTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 338
Query: 561 VVVEKIDF 568
+ V DF
Sbjct: 339 MKVTNEDF 346
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 443 (161.0 bits), Expect = 1.8e-41, P = 1.8e-41
Identities = 100/248 (40%), Positives = 143/248 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+AD+ G+D +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ APSI+FIDEIDA+ R
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-- 294
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 295 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ ++ I ++H S+ + LA D+ L D+ +G R +
Sbjct: 354 PLPDEKTKKRIFQIHTSR--MTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 561 VVVEKIDF 568
+ V DF
Sbjct: 412 MKVTNEDF 419
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 443 (161.0 bits), Expect = 1.8e-41, P = 1.8e-41
Identities = 100/248 (40%), Positives = 143/248 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+AD+ G+D +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ APSI+FIDEIDA+ R
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-- 294
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 295 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ ++ I ++H S+ + LA D+ L D+ +G R +
Sbjct: 354 PLPDEKTKKRIFQIHTSR--MTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 561 VVVEKIDF 568
+ V DF
Sbjct: 412 MKVTNEDF 419
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 443 (161.0 bits), Expect = 1.8e-41, P = 1.8e-41
Identities = 100/248 (40%), Positives = 143/248 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+AD+ G+D +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ APSI+FIDEIDA+ R
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-- 294
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 295 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ ++ I ++H S+ + LA D+ L D+ +G R +
Sbjct: 354 PLPDEKTKKRIFQIHTSR--MTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 561 VVVEKIDF 568
+ V DF
Sbjct: 412 MKVTNEDF 419
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 443 (161.0 bits), Expect = 1.8e-41, P = 1.8e-41
Identities = 100/248 (40%), Positives = 143/248 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+AD+ G+D +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ APSI+FIDEIDA+ R
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-- 294
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 295 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ ++ I ++H S+ + LA D+ L D+ +G R +
Sbjct: 354 PLPDEKTKKRIFQIHTSR--MTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 561 VVVEKIDF 568
+ V DF
Sbjct: 412 MKVTNEDF 419
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 443 (161.0 bits), Expect = 1.8e-41, P = 1.8e-41
Identities = 105/249 (42%), Positives = 143/249 (57%)
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
SE+ D +++ D+ G D K+E+ E VE L + Y ++G PPRGVLL G PGTGKT+L
Sbjct: 147 SEKPD-VSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTML 205
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
AKAVA FI SEFV+ Y+G G VRD+F AK+ AP+IIFIDE+DA+A +R
Sbjct: 206 AKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR- 264
Query: 442 GRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
F + +RE + L +LL +MDGFD V V+ ATNR+D LDPAL RPGR DR +
Sbjct: 265 --FDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIE 322
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
PD+ + + +V SK + L+ ++DL D S + R N
Sbjct: 323 FPLPDRRQKRLVFQVCTSK--MNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKN 380
Query: 560 KVVVEKIDF 568
+ V+ DF
Sbjct: 381 RYVILPKDF 389
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 443 (161.0 bits), Expect = 1.8e-41, P = 1.8e-41
Identities = 99/248 (39%), Positives = 143/248 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+AD+ G+D +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLA 236
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ APSI+FIDEIDA+ R
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-- 294
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 295 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ + I ++H S+ + +A+D+ L D+ +G R +
Sbjct: 354 PLPDEKTKRRIFQIHTSR--MTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERR 411
Query: 561 VVVEKIDF 568
+ V DF
Sbjct: 412 MKVTNEDF 419
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 442 (160.7 bits), Expect = 2.3e-41, P = 2.3e-41
Identities = 108/262 (41%), Positives = 145/262 (55%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
+Q +T+ADV G+D K+E++E VE L D Y ++G PPRGVLL G PGTGKT+L
Sbjct: 147 DQKPDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLV 206
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA FI + SEFV+ Y+G G VRD+F A++ +P+IIFIDEIDA+A R
Sbjct: 207 KAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKR-- 264
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
F + +RE + L +LL +MDGFD S V V+ ATNR+D LDPAL RPGR DR +
Sbjct: 265 -FDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDR--KI 321
Query: 501 ETPD-KIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
E P K RE L ++ LA + DL + +G R N
Sbjct: 322 EFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVRKN 381
Query: 560 KVVVEKIDFIHAVERSI-AGIE 580
+ ++ + D A + G E
Sbjct: 382 RYMILQSDLEEAYTSQVKTGTE 403
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 442 (160.7 bits), Expect = 2.3e-41, P = 2.3e-41
Identities = 108/262 (41%), Positives = 145/262 (55%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
+Q +T+ADV G+D K+E++E VE L D Y ++G PPRGVLL G PGTGKT+L
Sbjct: 147 DQKPDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLV 206
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA FI + SEFV+ Y+G G VRD+F A++ +P+IIFIDEIDA+A R
Sbjct: 207 KAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKR-- 264
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
F + +RE + L +LL +MDGFD S V V+ ATNR+D LDPAL RPGR DR +
Sbjct: 265 -FDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDR--KI 321
Query: 501 ETPD-KIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
E P K RE L ++ LA + DL + +G R N
Sbjct: 322 EFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVRKN 381
Query: 560 KVVVEKIDFIHAVERSI-AGIE 580
+ ++ + D A + G E
Sbjct: 382 RYMILQSDLEEAYTSQVKTGTE 403
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 461 (167.3 bits), Expect = 2.7e-41, P = 2.7e-41
Identities = 87/214 (40%), Positives = 136/214 (63%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+++ D+ G++ K EL+E V++ + P+K+ + G P +GVL G PG GKTLLAKA+A
Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++A R G
Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGD 596
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
++ LNQLLTEMDG ++ V ++GATNR D++D AL RPGR D+++ + PD+
Sbjct: 597 GGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDS 656
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R I K + K P+AKD+D+G +A T GF+G
Sbjct: 657 RLNIFKAALRKS--PIAKDVDIGALAKYTQGFSG 688
Score = 447 (162.4 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 98/220 (44%), Positives = 139/220 (63%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ D + + DV GV + ++ E+VE LR P + +G +PP+G+LL G PG+GKTL+A
Sbjct: 199 ERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 258
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K APSIIFIDEID++A R+
Sbjct: 259 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 318
Query: 443 RFRIVSNDEREQTL-NQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
+N E E+ + +QLLT MDG S + VIV+GATNR + +DPALRR GRFDR + +
Sbjct: 319 -----TNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIG 373
Query: 502 TPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD+IGR +L++H K + LA+D+DL I+ T G+ G
Sbjct: 374 VPDEIGRLEVLRIHT--KNMKLAEDVDLERISKDTHGYVG 411
Score = 40 (19.1 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 704 SIATLSSGGIDESGGGVPWGRDQVL 728
SIAT GG GGG D+VL
Sbjct: 584 SIATQRGGGSGGDGGGAA---DRVL 605
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 441 (160.3 bits), Expect = 3.0e-41, P = 3.0e-41
Identities = 102/267 (38%), Positives = 152/267 (56%)
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
+E ++++ ++ G+ EL E+VE L P+ +IR+G + P+GVLL G PGTGKTLL
Sbjct: 128 AESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLL 187
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
A+A+A E F+ +S V+ Y+G A +R++F A+ P +IF+DEIDA+ R
Sbjct: 188 ARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIG-GR- 245
Query: 442 GRFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVM 499
RF ++ +RE +TL +LL +MDGFD+ S V ++ ATNR DVLDPAL RPGR DR +
Sbjct: 246 -RFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIE 304
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
+ P++ GR +LK+H + + D+D IA + GF R
Sbjct: 305 IPLPNEAGRVDVLKIHAAN--ITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAE 362
Query: 560 KVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R +K KL
Sbjct: 363 RDYVMEEDFMKAV-RKCQEAKKLEGKL 388
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 441 (160.3 bits), Expect = 3.0e-41, P = 3.0e-41
Identities = 100/248 (40%), Positives = 143/248 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+AD+ G+D +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 176 EKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 235
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ APSI+FIDEIDAV R
Sbjct: 236 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKR-- 293
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 294 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 352
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ + I +H S+ + LA+D++L ++ +G R +
Sbjct: 353 PLPDEKTKRRIFTIHTSR--MTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERR 410
Query: 561 VVVEKIDF 568
+ V DF
Sbjct: 411 MKVTNEDF 418
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 441 (160.3 bits), Expect = 3.0e-41, P = 3.0e-41
Identities = 105/268 (39%), Positives = 156/268 (58%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E +++++++ G+ E EL E++E L +P+ + R+G PP+G LL G PGTGKTLLA
Sbjct: 125 EDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ +S V+ Y+G A +R++F A+ P IIF+DEIDA+ R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GR-- 241
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
E P++ R ILK+H P+ K DID I ++ GF G R
Sbjct: 302 ELPNEQARLDILKIHSG----PITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRA 357
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R +A +K +KL
Sbjct: 358 DHEYVTQEDFMKAV-RKVADSKKLESKL 384
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 440 (159.9 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 102/259 (39%), Positives = 154/259 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ V G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 146 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 205
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVS 448
E FI S SE V+ ++G G+ VR+LF A++ APSIIF+DEID++ SR
Sbjct: 206 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRI-ESGSGG 264
Query: 449 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGR 508
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LDPAL RPGR DR + P++ R
Sbjct: 265 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEAR 324
Query: 509 EAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDF 568
ILK+H S+K + L + I+L IA + G +G R +V V + DF
Sbjct: 325 LDILKIH-SRK-MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 382
Query: 569 IHAVERSIAGIEKKTAKLK 587
AV + + +K +K
Sbjct: 383 EMAVAKVMQKDSEKNMSIK 401
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 440 (159.9 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 100/264 (37%), Positives = 149/264 (56%)
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
V E+ D IT+ D+ G E E+L E+VE L P++++ LG PP+GVLL G PGTGKTL
Sbjct: 153 VEEKPD-ITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTL 211
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
A+A+A + FI SE V+ YVG GA VR+LF AK + I+FIDE+DA+ SR
Sbjct: 212 TARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSR 271
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
G + E ++T+ +++ ++DGFD+ + VL ATNR D LD AL RPGR DR +
Sbjct: 272 -GDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEF 330
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD GR I K+H + + +++D+ +A + TG R +
Sbjct: 331 SLPDLEGRTHIFKIHANT--MNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARR 388
Query: 561 VVVEKIDFIHAVERSIAGIEKKTA 584
+ + D + A+ + I G ++ +A
Sbjct: 389 KTITEKDLLLAINKVIHGCKQFSA 412
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 440 (159.9 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 100/264 (37%), Positives = 149/264 (56%)
Query: 322 VSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
V E+ D IT+ D+ G E E+L E+VE L P++++ LG PP+GVLL G PGTGKTL
Sbjct: 153 VEEKPD-ITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTL 211
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
A+A+A + FI SE V+ YVG GA VR+LF AK + I+FIDE+DA+ SR
Sbjct: 212 TARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSR 271
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
G + E ++T+ +++ ++DGFD+ + VL ATNR D LD AL RPGR DR +
Sbjct: 272 -GDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEF 330
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD GR I K+H + + +++D+ +A + TG R +
Sbjct: 331 SLPDLEGRTHIFKIHANT--MNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARR 388
Query: 561 VVVEKIDFIHAVERSIAGIEKKTA 584
+ + D + A+ + I G ++ +A
Sbjct: 389 KTITEKDLLLAINKVIHGCKQFSA 412
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 440 (159.9 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 102/251 (40%), Positives = 148/251 (58%)
Query: 324 EQGDTITFADVAGVDEAKEEL-EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T T++DV G+D+ EEL E IV ++ DK+ +G R P+G L+ G PGTGKTLLA
Sbjct: 173 DEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLA 232
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+A A + F+ +A + V++Y+G GA VRD FA AK++AP+IIFIDE+DA+ R
Sbjct: 233 RACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFD 292
Query: 443 RFRIVSND-EREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
+ S D E ++T+ +LL ++DGF S+ V VL ATNR DVLDPAL R GR DR +
Sbjct: 293 SEK--SGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFP 350
Query: 502 TPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKV 561
P + R IL++H S+K + DI+ ++A T F G R +
Sbjct: 351 LPSEDSRAQILQIH-SRK-MTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQS 408
Query: 562 VVEKIDFIHAV 572
V+ DF+ +
Sbjct: 409 SVKHEDFVEGI 419
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 440 (159.9 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 99/248 (39%), Positives = 142/248 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+AD+ G+D +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 177 EKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLA 236
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ APSI+FIDEIDA+ R
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-- 294
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 295 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ + I ++H S+ + +A D+ L D+ +G R +
Sbjct: 354 PLPDEKTKRRIFQIHTSR--MTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERR 411
Query: 561 VVVEKIDF 568
+ V DF
Sbjct: 412 MKVTNEDF 419
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 439 (159.6 bits), Expect = 5.1e-41, P = 5.1e-41
Identities = 105/262 (40%), Positives = 149/262 (56%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ D +++AD+ G+D K+E+ E VE L + Y ++G PPRGVL+ G PG GKT+LA
Sbjct: 153 EKPD-VSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA 211
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA FI SEFV+ Y+G G VRD+F AK+ AP+IIFIDEIDA+A R
Sbjct: 212 KAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR-- 269
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
F + +RE + L +LL +MDGFD + V V+ ATNR+D LDPAL RPGR DR +
Sbjct: 270 -FDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 328
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ + + SK + L++D+DL + + +G R N+
Sbjct: 329 PLPDRRQKRLVFSTITSK--MNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENR 386
Query: 561 VVVEKIDFIHAVERSIAGIEKK 582
+V DF + +I E++
Sbjct: 387 YIVLAKDFEKGYKNNIKKDEQE 408
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 439 (159.6 bits), Expect = 5.1e-41, P = 5.1e-41
Identities = 99/248 (39%), Positives = 143/248 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+AD+ G+D +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 176 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 235
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ APSI+FIDEIDA+ R
Sbjct: 236 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-- 293
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 294 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 352
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ ++ I ++H S+ + LA D+ L ++ +G R +
Sbjct: 353 PLPDEKTKKRIFQIHTSR--MTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERR 410
Query: 561 VVVEKIDF 568
+ V DF
Sbjct: 411 MKVTNEDF 418
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 439 (159.6 bits), Expect = 5.1e-41, P = 5.1e-41
Identities = 99/248 (39%), Positives = 143/248 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+AD+ G+D +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 175 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 234
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ APSI+FIDEIDA+ R
Sbjct: 235 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-- 292
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 293 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 351
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ ++ I ++H S+ + LA D+ L ++ +G R +
Sbjct: 352 PLPDEKTKKRIFQIHTSR--MTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERR 409
Query: 561 VVVEKIDF 568
+ V DF
Sbjct: 410 MKVTNEDF 417
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 439 (159.6 bits), Expect = 5.1e-41, P = 5.1e-41
Identities = 102/259 (39%), Positives = 151/259 (58%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ V G+D +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 173 TYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 232
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVS 448
E FI S SE V+ ++G GA VR+LF A++ APSIIF+DEID++ SR R
Sbjct: 233 TECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSR-GG 291
Query: 449 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGR 508
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LD AL RPGR DR + PD+ R
Sbjct: 292 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKAR 351
Query: 509 EAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDF 568
ILK+H S+K + L + I + IA G +G R ++ V + DF
Sbjct: 352 AQILKIH-SRK-MNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDF 409
Query: 569 IHAVERSIAGIEKKTAKLK 587
AV + + +K +K
Sbjct: 410 EMAVGKVMQKDSEKNMSIK 428
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 437 (158.9 bits), Expect = 8.6e-41, P = 8.6e-41
Identities = 98/247 (39%), Positives = 147/247 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ V G+D+ +E++E++E ++ P+ + LG P+GV+L G PGTGKTLLA+AVA
Sbjct: 142 TYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 201
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-DGRFRIV 447
E FI S SE V+ Y+G G+ VR+LF A++ APSIIF+DEID++ SR +G
Sbjct: 202 TECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSG-- 259
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ E ++T+ +LL ++DGF+S+ + ++ ATNR D+LDPAL RPGR DR + P
Sbjct: 260 GDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAA 319
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R ILK+H + + L + I+L IA G +G R ++ V + D
Sbjct: 320 RTDILKIH--SRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQED 377
Query: 568 FIHAVER 574
F AV +
Sbjct: 378 FELAVAK 384
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 437 (158.9 bits), Expect = 8.6e-41, P = 8.6e-41
Identities = 103/268 (38%), Positives = 156/268 (58%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E + +A++ G+ + EL E++E L +PD ++R+G PP+G LL G PGTGKTLLA
Sbjct: 134 EDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLA 193
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+A+A + + F+ +S V+ Y+G A +R++FA A+ P IIF+DEIDA+ R
Sbjct: 194 RAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIG-GR-- 250
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 251 RFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEI 310
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
P+++ R ILK+H PL K +ID + ++ F G R
Sbjct: 311 PLPNEVARMDILKIHAE----PLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRC 366
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
++ V + DF+ AV R IA +K ++L
Sbjct: 367 DREFVIQEDFMKAV-RKIADNKKLESRL 393
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 437 (158.9 bits), Expect = 8.6e-41, P = 8.6e-41
Identities = 96/246 (39%), Positives = 144/246 (58%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ V G+++ +E++E++E ++ P+ + LG P+G+LL G PGTGKTLLA+AVA
Sbjct: 143 TYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHH 202
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVS 448
+ FI S SE V+ Y+G G+ VR+LF A++ APSIIF+DEID++ SR
Sbjct: 203 TDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSG 262
Query: 449 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGR 508
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LDPAL RPGR DR + P R
Sbjct: 263 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEAR 322
Query: 509 EAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDF 568
IL++H + + L + IDL IA G +G R +V V + DF
Sbjct: 323 AEILRIH--SRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDF 380
Query: 569 IHAVER 574
AV +
Sbjct: 381 ELAVAK 386
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 456 (165.6 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 88/214 (41%), Positives = 137/214 (64%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+++ D+ G++ K EL+E V++ + P+K+ + G P +GVL G PG GKTLLAKA+A
Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
E + FIS E + ++ G + VR++F +A++ AP ++F DE+D++A R G
Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR-GNSVGD 596
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ ++ LNQLLTEMDG ++ V ++GATNR D++DPAL RPGR D+++ + PD+
Sbjct: 597 AGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 656
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
R I K + K P+AKD+DL +A T GF+G
Sbjct: 657 RYQIFKSCLRKS--PVAKDVDLRALAKYTQGFSG 688
Score = 443 (161.0 bits), Expect = 3.8e-39, P = 3.8e-39
Identities = 97/219 (44%), Positives = 138/219 (63%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ D + + DV GV + ++ E+VE LR P + +G +PP+G+LL G PG+GKTL+A
Sbjct: 200 ERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 259
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA E F + E + G S +R F A+K APSIIFIDEID++A R+
Sbjct: 260 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 319
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
V ER + ++QLLT MDG S + VIV+GATNR + +DPALRR GRFDR + +
Sbjct: 320 THGEV---ER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV 375
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD+IGR +L++H K + LA+D+DL ++ T G+ G
Sbjct: 376 PDEIGRLEVLRIHT--KNMKLAEDVDLERVSKDTHGYVG 412
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 435 (158.2 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 104/268 (38%), Positives = 157/268 (58%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
+ GD ++++++ G+ E EL E++E L +P+ + R+G PP+G LL G PGTGKTLLA
Sbjct: 140 DPGD-VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 198
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ +S V+ Y+G A +R++F A+ P IIF+DEIDA+ R
Sbjct: 199 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GR-- 255
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 256 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
+ P++ R ILK+H P+ K +ID I ++ GF G R
Sbjct: 316 DLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRA 371
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R +A +K +KL
Sbjct: 372 DHDFVVQEDFMKAV-RKVADSKKLESKL 398
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 435 (158.2 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 104/268 (38%), Positives = 157/268 (58%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
+ GD ++++++ G+ E EL E++E L +P+ + R+G PP+G LL G PGTGKTLLA
Sbjct: 126 DPGD-VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ +S V+ Y+G A +R++F A+ P IIF+DEIDA+ R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GR-- 241
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
+ P++ R ILK+H P+ K +ID I ++ GF G R
Sbjct: 302 DLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRA 357
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R +A +K +KL
Sbjct: 358 DHDFVVQEDFMKAV-RKVADSKKLESKL 384
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 435 (158.2 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 98/248 (39%), Positives = 142/248 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ T+AD+ G+D +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR+LF A++ PSI+FIDEIDA+ R
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKR-- 294
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 295 -YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ ++ I ++H S+ + LA D+ L ++ +G R +
Sbjct: 354 PLPDEKTKKRIFQIHTSR--MTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 561 VVVEKIDF 568
+ V DF
Sbjct: 412 MKVTNEDF 419
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 435 (158.2 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 102/254 (40%), Positives = 144/254 (56%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ ++AD+ G++ +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 180 EKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLA 239
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA F+ SE ++ Y+G G VR+LF A +PSI+FIDEIDAV R
Sbjct: 240 KAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKR-- 297
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFDS V V+ ATNR + LDPAL RPGR DR +
Sbjct: 298 -YDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEF 356
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD R I ++H SK + LA+D++L + F+G R +
Sbjct: 357 PLPDIKTRRRIFQIHTSK--MTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERR 414
Query: 561 VVVEKIDFIHAVER 574
+ V +DF A E+
Sbjct: 415 MKVTHVDFKKAKEK 428
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 419 (152.6 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 91/221 (41%), Positives = 140/221 (63%)
Query: 324 EQGDTITFADVAGVDEAKEEL-EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T + D+ G+++ +EL E IV + +++ +LG RPP+GVLL G PGTGKTL+A
Sbjct: 163 DEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMA 222
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-D 441
+A A + F+ + + V++++G GA VRD F AK++AP IIFIDEIDA+ R D
Sbjct: 223 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFD 282
Query: 442 GRFRIVSND-EREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
VS D E ++T+ +LL ++DGF S+ + V+ ATNR+D+LDPAL R GR DR +
Sbjct: 283 SE---VSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEF 339
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
P + R IL++H S+K + + D++ ++A T F G
Sbjct: 340 PHPTEEARARILQIH-SRK-MNVHPDVNFEELARSTDDFNG 378
Score = 38 (18.4 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 56 ISNSQQKLSLKRGLLYSNQNLREI 79
I +Q+K+ L + L Y N+ EI
Sbjct: 57 IKENQEKIKLNKQLPYLVGNIVEI 80
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 423 (154.0 bits), Expect = 1.8e-40, Sum P(3) = 1.8e-40
Identities = 98/220 (44%), Positives = 131/220 (59%)
Query: 325 QGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKA 384
Q + F DV G D +E+ +++ +R P+ Y LG PPRGVLL G PG GKTLLA A
Sbjct: 152 QISNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHA 211
Query: 385 VAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRF 444
+AGE ++P + +A E V G ++R+LF +A AP IIFIDEIDA+ R+
Sbjct: 212 IAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKRE--- 268
Query: 445 RIVSNDEREQTLNQLLTEMDGFDSNSA---VIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
+ S D + + QLLT MD ++ +A V+V+GATNR D LDPALRR GRFDR + +
Sbjct: 269 -VASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 327
Query: 502 TPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
PD+ RE IL+ K LP A D +A +T GF G
Sbjct: 328 IPDEASRERILQTLCRKLRLPQA--FDFCHLAHLTPGFVG 365
Score = 259 (96.2 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 54/116 (46%), Positives = 74/116 (63%)
Query: 329 ITFADVAGVDEAKEELE-EIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+T+AD+ +++ +EEL I+ +R+PD++ LG P GVLL G PG GKTLLAKAVA
Sbjct: 472 VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVAN 531
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGR 443
E+ + FIS E + +YVG VR +F RAK AP +IF DE+DA+ R R
Sbjct: 532 ESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDR 587
Score = 43 (20.2 bits), Expect = 1.8e-40, Sum P(3) = 1.8e-40
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 270 PDKRSGGFLNSALIALF 286
PD +S +NS+L++L+
Sbjct: 5 PDPQSANHMNSSLLSLY 21
Score = 39 (18.8 bits), Expect = 4.6e-40, Sum P(3) = 4.6e-40
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 210 KLKNDGSIQESEVITNKFQESESLLK 235
KLKN GS ++ E + E E++L+
Sbjct: 116 KLKNKGSKRKKEDLQEVDGEIEAVLQ 141
Score = 38 (18.4 bits), Expect = 1.8e-40, Sum P(3) = 1.8e-40
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 675 GALDDIRRATDMAYKA 690
GAL+DIR MA A
Sbjct: 478 GALEDIREELTMAILA 493
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 434 (157.8 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 101/260 (38%), Positives = 155/260 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ + G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 153 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 212
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-DGRFRIV 447
+ FI S SE V+ ++G GA VR+LF A++ APSIIF+DEID++ SR +G
Sbjct: 213 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-- 270
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LD AL RPGR DR + P++
Sbjct: 271 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 330
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R ILK+H S+K + L + I+L IA + G +G R +V V + D
Sbjct: 331 RLDILKIH-SRK-MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 388
Query: 568 FIHAVERSIAGIEKKTAKLK 587
F AV + + +K +K
Sbjct: 389 FEMAVAKVMQKDSEKNMSIK 408
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 434 (157.8 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 101/260 (38%), Positives = 155/260 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ + G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-DGRFRIV 447
+ FI S SE V+ ++G GA VR+LF A++ APSIIF+DEID++ SR +G
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-- 264
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LD AL RPGR DR + P++
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R ILK+H S+K + L + I+L IA + G +G R +V V + D
Sbjct: 325 RLDILKIH-SRK-MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 568 FIHAVERSIAGIEKKTAKLK 587
F AV + + +K +K
Sbjct: 383 FEMAVAKVMQKDSEKNMSIK 402
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 434 (157.8 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 101/260 (38%), Positives = 155/260 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ + G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-DGRFRIV 447
+ FI S SE V+ ++G GA VR+LF A++ APSIIF+DEID++ SR +G
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-- 264
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LD AL RPGR DR + P++
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R ILK+H S+K + L + I+L IA + G +G R +V V + D
Sbjct: 325 RLDILKIH-SRK-MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 568 FIHAVERSIAGIEKKTAKLK 587
F AV + + +K +K
Sbjct: 383 FEMAVAKVMQKDSEKNMSIK 402
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 434 (157.8 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 101/260 (38%), Positives = 155/260 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ + G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-DGRFRIV 447
+ FI S SE V+ ++G GA VR+LF A++ APSIIF+DEID++ SR +G
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-- 264
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LD AL RPGR DR + P++
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R ILK+H S+K + L + I+L IA + G +G R +V V + D
Sbjct: 325 RLDILKIH-SRK-MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 568 FIHAVERSIAGIEKKTAKLK 587
F AV + + +K +K
Sbjct: 383 FEMAVAKVMQKDSEKNMSIK 402
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 434 (157.8 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 101/260 (38%), Positives = 155/260 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ + G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-DGRFRIV 447
+ FI S SE V+ ++G GA VR+LF A++ APSIIF+DEID++ SR +G
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-- 264
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LD AL RPGR DR + P++
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R ILK+H S+K + L + I+L IA + G +G R +V V + D
Sbjct: 325 RLDILKIH-SRK-MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 568 FIHAVERSIAGIEKKTAKLK 587
F AV + + +K +K
Sbjct: 383 FEMAVAKVMQKDSEKNMSIK 402
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 434 (157.8 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 101/260 (38%), Positives = 155/260 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ + G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 155 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 214
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-DGRFRIV 447
+ FI S SE V+ ++G GA VR+LF A++ APSIIF+DEID++ SR +G
Sbjct: 215 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-- 272
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LD AL RPGR DR + P++
Sbjct: 273 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 332
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R ILK+H S+K + L + I+L IA + G +G R +V V + D
Sbjct: 333 RLDILKIH-SRK-MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 390
Query: 568 FIHAVERSIAGIEKKTAKLK 587
F AV + + +K +K
Sbjct: 391 FEMAVAKVMQKDSEKNMSIK 410
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 434 (157.8 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 101/260 (38%), Positives = 155/260 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ + G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 155 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 214
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-DGRFRIV 447
+ FI S SE V+ ++G GA VR+LF A++ APSIIF+DEID++ SR +G
Sbjct: 215 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-- 272
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LD AL RPGR DR + P++
Sbjct: 273 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 332
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R ILK+H S+K + L + I+L IA + G +G R +V V + D
Sbjct: 333 RLDILKIH-SRK-MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 390
Query: 568 FIHAVERSIAGIEKKTAKLK 587
F AV + + +K +K
Sbjct: 391 FEMAVAKVMQKDSEKNMSIK 410
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 434 (157.8 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 101/260 (38%), Positives = 155/260 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ + G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-DGRFRIV 447
+ FI S SE V+ ++G GA VR+LF A++ APSIIF+DEID++ SR +G
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-- 264
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LD AL RPGR DR + P++
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R ILK+H S+K + L + I+L IA + G +G R +V V + D
Sbjct: 325 RLDILKIH-SRK-MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 568 FIHAVERSIAGIEKKTAKLK 587
F AV + + +K +K
Sbjct: 383 FEMAVAKVMQKDSEKNMSIK 402
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 434 (157.8 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 101/260 (38%), Positives = 155/260 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ + G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-DGRFRIV 447
+ FI S SE V+ ++G GA VR+LF A++ APSIIF+DEID++ SR +G
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-- 264
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LD AL RPGR DR + P++
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R ILK+H S+K + L + I+L IA + G +G R +V V + D
Sbjct: 325 RLDILKIH-SRK-MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 568 FIHAVERSIAGIEKKTAKLK 587
F AV + + +K +K
Sbjct: 383 FEMAVAKVMQKDSEKNMSIK 402
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 434 (157.8 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 101/260 (38%), Positives = 155/260 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ + G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-DGRFRIV 447
+ FI S SE V+ ++G GA VR+LF A++ APSIIF+DEID++ SR +G
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-- 264
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LD AL RPGR DR + P++
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKID 567
R ILK+H S+K + L + I+L IA + G +G R +V V + D
Sbjct: 325 RLDILKIH-SRK-MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 568 FIHAVERSIAGIEKKTAKLK 587
F AV + + +K +K
Sbjct: 383 FEMAVAKVMQKDSEKNMSIK 402
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 433 (157.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 105/250 (42%), Positives = 142/250 (56%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
+++D+ G D K+E+ E VE L + Y ++G PPRGVLL G PGTGKT+LAKAVA
Sbjct: 148 SYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHH 207
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVS 448
FI SEFV+ Y+G G VRD+F A++ +P+IIFIDEIDA+A R F +
Sbjct: 208 TSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKR---FDAQT 264
Query: 449 NDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKI 506
+RE + L +LL +MDGFD + V V+ ATNR D LDPAL RPGR DR + PD+
Sbjct: 265 GADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 324
Query: 507 GREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKI 566
+ I +V SK + L+ ++DL D S +G R N+ V+
Sbjct: 325 QKRLIFQVITSK--MNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPK 382
Query: 567 DFIHAVERSI 576
DF + SI
Sbjct: 383 DFEKGYKASI 392
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 433 (157.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 103/268 (38%), Positives = 155/268 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E ++++++ G+ E EL E++E L +P+ + R+G PP+G LL G PGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ +S V+ Y+G A +R++F A+ P IIF+DEIDA+ R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GR-- 241
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
+ P++ R ILK+H P+ K +ID I ++ GF G R
Sbjct: 302 DLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRA 357
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R +A +K +KL
Sbjct: 358 DHDFVVQEDFMKAV-RKVADSKKLESKL 384
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 433 (157.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 103/268 (38%), Positives = 155/268 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E ++++++ G+ E EL E++E L +P+ + R+G PP+G LL G PGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ +S V+ Y+G A +R++F A+ P IIF+DEIDA+ R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GR-- 241
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
+ P++ R ILK+H P+ K +ID I ++ GF G R
Sbjct: 302 DLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRA 357
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R +A +K +KL
Sbjct: 358 DHDFVVQEDFMKAV-RKVADSKKLESKL 384
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 433 (157.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 103/268 (38%), Positives = 155/268 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E ++++++ G+ E EL E++E L +P+ + R+G PP+G LL G PGTGKTLLA
Sbjct: 131 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 190
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ +S V+ Y+G A +R++F A+ P IIF+DEIDA+ R
Sbjct: 191 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GR-- 247
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 248 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 307
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
+ P++ R ILK+H P+ K +ID I ++ GF G R
Sbjct: 308 DLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRA 363
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R +A +K +KL
Sbjct: 364 DHDFVVQEDFMKAV-RKVADSKKLESKL 390
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 433 (157.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 103/268 (38%), Positives = 155/268 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E ++++++ G+ E EL E++E L +P+ + R+G PP+G LL G PGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ +S V+ Y+G A +R++F A+ P IIF+DEIDA+ R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GR-- 241
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
+ P++ R ILK+H P+ K +ID I ++ GF G R
Sbjct: 302 DLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRA 357
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R +A +K +KL
Sbjct: 358 DHDFVVQEDFMKAV-RKVADSKKLESKL 384
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 433 (157.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 103/268 (38%), Positives = 155/268 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E ++++++ G+ E EL E++E L +P+ + R+G PP+G LL G PGTGKTLLA
Sbjct: 139 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 198
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ +S V+ Y+G A +R++F A+ P IIF+DEIDA+ R
Sbjct: 199 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GR-- 255
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 256 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
+ P++ R ILK+H P+ K +ID I ++ GF G R
Sbjct: 316 DLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRA 371
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R +A +K +KL
Sbjct: 372 DHDFVVQEDFMKAV-RKVADSKKLESKL 398
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 433 (157.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 103/268 (38%), Positives = 155/268 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E ++++++ G+ E EL E++E L +P+ + R+G PP+G LL G PGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ +S V+ Y+G A +R++F A+ P IIF+DEIDA+ R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GR-- 241
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
+ P++ R ILK+H P+ K +ID I ++ GF G R
Sbjct: 302 DLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRA 357
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R +A +K +KL
Sbjct: 358 DHDFVVQEDFMKAV-RKVADSKKLESKL 384
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 433 (157.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 103/268 (38%), Positives = 155/268 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E ++++++ G+ E EL E++E L +P+ + R+G PP+G LL G PGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ +S V+ Y+G A +R++F A+ P IIF+DEIDA+ R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GR-- 241
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
+ P++ R ILK+H P+ K +ID I ++ GF G R
Sbjct: 302 DLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRA 357
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R +A +K +KL
Sbjct: 358 DHDFVVQEDFMKAV-RKVADSKKLESKL 384
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 433 (157.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 98/255 (38%), Positives = 147/255 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T ++AD+ G++ +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 183 DKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLA 242
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G VR LF A++ +PSI+FIDEIDA+ R
Sbjct: 243 KAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKR-- 300
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVI-VLGATNRSDVLDPALRRPGRFDRVVM 499
+ S ERE +T+ +LL ++DGFD++ I V+ ATNR LDPAL RPGR DR ++
Sbjct: 301 -YDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKIL 359
Query: 500 VETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLN 559
E PD+ + I +H SK + L +D++L ++ +G R
Sbjct: 360 FENPDEATKRKIFTIHTSK--MNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRER 417
Query: 560 KVVVEKIDFIHAVER 574
++ V DF A E+
Sbjct: 418 RMRVVMDDFRQAREK 432
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 433 (157.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 103/268 (38%), Positives = 155/268 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E ++++++ G+ E EL E++E L +P+ + R+G PP+G LL G PGTGKTLLA
Sbjct: 117 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 176
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ +S V+ Y+G A +R++F A+ P IIF+DEIDA+ R
Sbjct: 177 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GR-- 233
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 234 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 293
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
+ P++ R ILK+H P+ K +ID I ++ GF G R
Sbjct: 294 DLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRA 349
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R +A +K +KL
Sbjct: 350 DHDFVVQEDFMKAV-RKVADSKKLESKL 376
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 433 (157.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 103/268 (38%), Positives = 155/268 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E ++++++ G+ E EL E++E L +P+ + R+G PP+G LL G PGTGKTLLA
Sbjct: 139 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 198
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ +S V+ Y+G A +R++F A+ P IIF+DEIDA+ R
Sbjct: 199 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GR-- 255
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFD+ V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 256 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
+ P++ R ILK+H P+ K +ID I ++ GF G R
Sbjct: 316 DLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRA 371
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R +A +K +KL
Sbjct: 372 DHDFVVQEDFMKAV-RKVADSKKLESKL 398
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 433 (157.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 97/254 (38%), Positives = 146/254 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T +++D+ G++ +E++E VE L P+ Y +G +PP+GV+L G PGTGKTLLA
Sbjct: 174 DKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLA 233
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA + F+ SE ++ Y+G G R +F A + APSI+FIDEIDA+ R
Sbjct: 234 KAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKR-- 291
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+ S ERE +T+ +LL ++DGFD V V+ ATN+ + LDPAL RPGR DR ++
Sbjct: 292 -YDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILF 350
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
E PD ++ IL +H SK + L++D++L + + +G R +
Sbjct: 351 ENPDLSTKKKILGIHTSK--MNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERR 408
Query: 561 VVVEKIDFIHAVER 574
+ V DF A ER
Sbjct: 409 MQVTAEDFKQAKER 422
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 432 (157.1 bits), Expect = 3.2e-40, P = 3.2e-40
Identities = 99/259 (38%), Positives = 153/259 (59%)
Query: 330 TFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
T+ + G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKTLLA+AVA
Sbjct: 142 TYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 201
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVS 448
+ FI S SE V+ ++G GA VR+LF A++ APSIIF+DEID++ +G
Sbjct: 202 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSG--G 259
Query: 449 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGR 508
+ E ++T+ +LL ++DGF++ + V+ ATNR D+LD AL RPGR DR + P++ R
Sbjct: 260 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 319
Query: 509 EAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNKVVVEKIDF 568
ILK+H S+K + L + I+L IA + G +G R +V V + DF
Sbjct: 320 LDILKIH-SRK-MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 377
Query: 569 IHAVERSIAGIEKKTAKLK 587
AV + + +K +K
Sbjct: 378 EMAVAKVMQKDSEKNMSIK 396
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 430 (156.4 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 106/262 (40%), Positives = 147/262 (56%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ D I++ D+ G+D K+E+ E VE L + Y ++G PPRGVL+ G PG GKT+LA
Sbjct: 154 EKPD-ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLA 212
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA FI SEFV+ Y+G G VRD+F AK+ +PSIIFIDEIDA+A R
Sbjct: 213 KAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKR-- 270
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
F + +RE + L +LL +MDGFD ++ V V+ ATNR D LDPAL RPGR DR +
Sbjct: 271 -FDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEF 329
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRLNK 560
PD+ + + S+ + L+ D+DL D + +G R N+
Sbjct: 330 PLPDRRQKRLVFSTVCSR--MNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENR 387
Query: 561 VVVEKIDFIHAVERSIAGIEKK 582
VV D +E++ + KK
Sbjct: 388 YVVLTKD----LEKAYKNVVKK 405
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 429 (156.1 bits), Expect = 6.9e-40, P = 6.9e-40
Identities = 87/219 (39%), Positives = 142/219 (64%)
Query: 324 EQGDTITFADVAGVDEAKEEL-EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T ++D+ G D+ +EL E +V + D+++ LG PP+GVL+ G PGTGKT++A
Sbjct: 169 DERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMA 228
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ + + V++++G GA VRD FA AK++AP+IIFIDE+DA+ R
Sbjct: 229 RAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFD 288
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
+ + E ++T+ +LL ++DGF N + V+ ATNR DVLDPAL R GR DR + +
Sbjct: 289 SEK-AGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPH 347
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
P++ R I+++H S+K + + KD++ ++A T F G
Sbjct: 348 PNEDARARIMQIH-SRK-MNVNKDVNFEELARCTDDFNG 384
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 429 (156.1 bits), Expect = 6.9e-40, P = 6.9e-40
Identities = 87/219 (39%), Positives = 142/219 (64%)
Query: 324 EQGDTITFADVAGVDEAKEEL-EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T ++D+ G D+ +EL E +V + D+++ LG PP+GVL+ G PGTGKT++A
Sbjct: 169 DERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMA 228
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ + + V++++G GA VRD FA AK++AP+IIFIDE+DA+ R
Sbjct: 229 RAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFD 288
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
+ + E ++T+ +LL ++DGF N + V+ ATNR DVLDPAL R GR DR + +
Sbjct: 289 SEK-AGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPH 347
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
P++ R I+++H S+K + + KD++ ++A T F G
Sbjct: 348 PNEDARARIMQIH-SRK-MNVNKDVNFEELARCTDDFNG 384
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 413 (150.4 bits), Expect = 7.3e-40, Sum P(2) = 7.3e-40
Identities = 90/221 (40%), Positives = 140/221 (63%)
Query: 324 EQGDTITFADVAGVDEAKEEL-EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T + D+ G+++ +EL E IV + +++ +LG RPP+GVLL G PGTGKTL+A
Sbjct: 162 DEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMA 221
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR-D 441
+A A + F+ + + V++++G GA VRD F AK+++P IIFIDEIDA+ R D
Sbjct: 222 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFD 281
Query: 442 GRFRIVSND-EREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
VS D E ++T+ +LL ++DGF S+ + V+ ATNR+D+LDPAL R GR DR +
Sbjct: 282 SE---VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEF 338
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
P + R IL++H S+K + + D++ ++A T F G
Sbjct: 339 PHPTEEARGRILQIH-SRK-MNVNADVNFEELARSTDDFNG 377
Score = 38 (18.4 bits), Expect = 7.3e-40, Sum P(2) = 7.3e-40
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 56 ISNSQQKLSLKRGLLYSNQNLREI 79
I +Q+K+ L + L Y N+ EI
Sbjct: 56 IKENQEKIKLNKQLPYLVGNIVEI 79
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 451 (163.8 bits), Expect = 8.8e-40, P = 8.8e-40
Identities = 97/214 (45%), Positives = 136/214 (63%)
Query: 329 ITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
+ + DV G +E K +L E VE+ + D + R+G RPP G+L+ G PG KTL+A+AVA
Sbjct: 721 VNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVAS 780
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
EA++ F++ E +VG VR LFA+A+ APSIIF DEID++A R V
Sbjct: 781 EAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDGV 840
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
S +R ++QLL E+DG V V+ ATNR D +D AL RPGRFDR++ V P++
Sbjct: 841 SVSDR--VMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETD 898
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
REAILK+H+ K +P + DI L ++AS+T G+TG
Sbjct: 899 REAILKIHLRK--IPCSSDICLKELASITKGYTG 930
Score = 308 (113.5 bits), Expect = 7.8e-24, P = 7.8e-24
Identities = 71/221 (32%), Positives = 117/221 (52%)
Query: 324 EQGDTI--TFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
++G+ + + + G+ + L +I++ + LG RP +GVL+ G PGTGKT L
Sbjct: 375 DEGENVGCEISKLGGLSKEYAILRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSL 434
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR- 440
A+ A + V F S + E + Y+G + ++F A P+++FID++DA+A +R
Sbjct: 435 ARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARK 494
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
+G + ++ + LL MDG V+V+ ATNR D ++PALRRPGR DR + +
Sbjct: 495 EG-----GEELSQRMVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEI 549
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
P R IL + + L+ +I + +A T GF G
Sbjct: 550 GVPSSTQRSDILHIILRGMRHSLS-NIQVEQLAMATHGFVG 589
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 428 (155.7 bits), Expect = 8.9e-40, P = 8.9e-40
Identities = 104/268 (38%), Positives = 156/268 (58%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
+ GD +T++ + G+ + EL E++E L +P+ ++R+G PP+G LL G PGTGKTLLA
Sbjct: 134 DPGD-VTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLA 192
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+AVA + + F+ +S V+ Y+G A +R++F A+ P IIF+DEIDA+ R
Sbjct: 193 RAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GR-- 249
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
RF ++ +RE +TL +LL +MDGFDS V ++ ATNR D LDPAL RPGR DR + +
Sbjct: 250 RFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEI 309
Query: 501 ETPDKIGREAILKVHVSKKELPLAK--DIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
P++ R ILK+H K +AK +ID I ++ F G R
Sbjct: 310 PLPNEQARLEILKIHALK----IAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRA 365
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAKL 586
+ V + DF+ AV R ++ +K +KL
Sbjct: 366 EREYVIQGDFMKAV-RKVSDNKKLESKL 392
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 428 (155.7 bits), Expect = 8.9e-40, P = 8.9e-40
Identities = 103/267 (38%), Positives = 157/267 (58%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
KV + D+ T+ V G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKT
Sbjct: 169 KVEKVPDS-TYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKT 227
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
LLA+AVA + FI S SE V+ Y+G G+ VR+LF A++ APSIIF+DEID++
Sbjct: 228 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQ 287
Query: 440 R-DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVV 498
R +G + E ++T+ +LL ++DGF+S + V+ TNR D+LD AL RPGR DR +
Sbjct: 288 RIEGEH---GDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKI 344
Query: 499 MVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
P+ R ILK+H S+K + L + ID+ IA+ +G R
Sbjct: 345 EFPNPNVEARMEILKIH-SRK-MNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRE 402
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAK 585
+V V + DF E ++A + K+ A+
Sbjct: 403 RRVHVTQEDF----EMAVAKVMKQDAE 425
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 428 (155.7 bits), Expect = 8.9e-40, P = 8.9e-40
Identities = 89/219 (40%), Positives = 142/219 (64%)
Query: 324 EQGDTITFADVAGVDEAKEEL-EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T ++D+ G+D+ +EL E IV + +K+ LG +PP+GVL+ G PGTGKTLLA
Sbjct: 124 DERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 183
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+A A + + F+ + + V++++G GA VRD FA AK++APSIIFIDE+DA+ R
Sbjct: 184 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 243
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
+ + E ++T+ +LL ++DGF N+ V V+ ATNR D+LDPAL R GR DR +
Sbjct: 244 SEK-AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 302
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
P++ R I+++H S+K + ++ D++ ++A T F G
Sbjct: 303 PNEEARARIMQIH-SRK-MNVSPDVNYEELARCTDDFNG 339
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 428 (155.7 bits), Expect = 8.9e-40, P = 8.9e-40
Identities = 89/219 (40%), Positives = 142/219 (64%)
Query: 324 EQGDTITFADVAGVDEAKEEL-EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T ++D+ G+D+ +EL E IV + +K+ LG +PP+GVL+ G PGTGKTLLA
Sbjct: 128 DERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 187
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+A A + + F+ + + V++++G GA VRD FA AK++APSIIFIDE+DA+ R
Sbjct: 188 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 247
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
+ + E ++T+ +LL ++DGF N+ V V+ ATNR D+LDPAL R GR DR +
Sbjct: 248 SEK-AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 306
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
P++ R I+++H S+K + ++ D++ ++A T F G
Sbjct: 307 PNEEARARIMQIH-SRK-MNVSPDVNYEELARCTDDFNG 343
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 428 (155.7 bits), Expect = 8.9e-40, P = 8.9e-40
Identities = 89/219 (40%), Positives = 142/219 (64%)
Query: 324 EQGDTITFADVAGVDEAKEEL-EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T ++D+ G+D+ +EL E IV + +K+ LG +PP+GVL+ G PGTGKTLLA
Sbjct: 178 DERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 237
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+A A + + F+ + + V++++G GA VRD FA AK++APSIIFIDE+DA+ R
Sbjct: 238 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 297
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
+ + E ++T+ +LL ++DGF N+ V V+ ATNR D+LDPAL R GR DR +
Sbjct: 298 SEK-AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 356
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
P++ R I+++H S+K + ++ D++ ++A T F G
Sbjct: 357 PNEEARARIMQIH-SRK-MNVSPDVNYEELARCTDDFNG 393
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 428 (155.7 bits), Expect = 8.9e-40, P = 8.9e-40
Identities = 89/219 (40%), Positives = 142/219 (64%)
Query: 324 EQGDTITFADVAGVDEAKEEL-EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T ++D+ G+D+ +EL E IV + +K+ LG +PP+GVL+ G PGTGKTLLA
Sbjct: 136 DERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 195
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+A A + + F+ + + V++++G GA VRD FA AK++APSIIFIDE+DA+ R
Sbjct: 196 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 255
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
+ + E ++T+ +LL ++DGF N+ V V+ ATNR D+LDPAL R GR DR +
Sbjct: 256 SEK-AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 314
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
P++ R I+++H S+K + ++ D++ ++A T F G
Sbjct: 315 PNEEARARIMQIH-SRK-MNVSPDVNYEELARCTDDFNG 351
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 428 (155.7 bits), Expect = 8.9e-40, P = 8.9e-40
Identities = 89/219 (40%), Positives = 142/219 (64%)
Query: 324 EQGDTITFADVAGVDEAKEEL-EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T ++D+ G+D+ +EL E IV + +K+ LG +PP+GVL+ G PGTGKTLLA
Sbjct: 178 DERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 237
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+A A + + F+ + + V++++G GA VRD FA AK++APSIIFIDE+DA+ R
Sbjct: 238 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 297
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
+ + E ++T+ +LL ++DGF N+ V V+ ATNR D+LDPAL R GR DR +
Sbjct: 298 SEK-AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 356
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
P++ R I+++H S+K + ++ D++ ++A T F G
Sbjct: 357 PNEEARARIMQIH-SRK-MNVSPDVNYEELARCTDDFNG 393
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 428 (155.7 bits), Expect = 8.9e-40, P = 8.9e-40
Identities = 89/219 (40%), Positives = 142/219 (64%)
Query: 324 EQGDTITFADVAGVDEAKEEL-EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T ++D+ G+D+ +EL E IV + +K+ LG +PP+GVL+ G PGTGKTLLA
Sbjct: 185 DERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 244
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+A A + + F+ + + V++++G GA VRD FA AK++APSIIFIDE+DA+ R
Sbjct: 245 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 304
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
+ + E ++T+ +LL ++DGF N+ V V+ ATNR D+LDPAL R GR DR +
Sbjct: 305 SEK-AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 363
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
P++ R I+++H S+K + ++ D++ ++A T F G
Sbjct: 364 PNEEARARIMQIH-SRK-MNVSPDVNYEELARCTDDFNG 400
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 428 (155.7 bits), Expect = 8.9e-40, P = 8.9e-40
Identities = 103/267 (38%), Positives = 157/267 (58%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKT 379
KV + D+ T+ V G+D+ +E++E++E ++ P+ + LG P+GVLL G PGTGKT
Sbjct: 169 KVEKVPDS-TYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKT 227
Query: 380 LLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKS 439
LLA+AVA + FI S SE V+ Y+G G+ VR+LF A++ APSIIF+DEID++
Sbjct: 228 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQ 287
Query: 440 R-DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVV 498
R +G + E ++T+ +LL ++DGF+S + V+ TNR D+LD AL RPGR DR +
Sbjct: 288 RIEGEH---GDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKI 344
Query: 499 MVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGRL 558
P+ R ILK+H S+K + L + ID+ IA+ +G R
Sbjct: 345 EFPNPNVEARMEILKIH-SRK-MNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRE 402
Query: 559 NKVVVEKIDFIHAVERSIAGIEKKTAK 585
+V V + DF E ++A + K+ A+
Sbjct: 403 RRVHVTQEDF----EMAVAKVMKQDAE 425
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 428 (155.7 bits), Expect = 8.9e-40, P = 8.9e-40
Identities = 89/219 (40%), Positives = 142/219 (64%)
Query: 324 EQGDTITFADVAGVDEAKEEL-EEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
++ T ++D+ G+D+ +EL E IV + +K+ LG +PP+GVL+ G PGTGKTLLA
Sbjct: 181 DERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 240
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
+A A + + F+ + + V++++G GA VRD FA AK++APSIIFIDE+DA+ R
Sbjct: 241 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 300
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
+ + E ++T+ +LL ++DGF N+ V V+ ATNR D+LDPAL R GR DR +
Sbjct: 301 SEK-AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 359
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTG 541
P++ R I+++H S+K + ++ D++ ++A T F G
Sbjct: 360 PNEEARARIMQIH-SRK-MNVSPDVNYEELARCTDDFNG 396
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 428 (155.7 bits), Expect = 8.9e-40, P = 8.9e-40
Identities = 107/259 (41%), Positives = 148/259 (57%)
Query: 324 EQGDTITFADVAGVDEAKEELEEIVEF-LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
E+ D +++ADV G+D K+E+ E VE L D Y ++G PPRGVLL G PGTGKT+L
Sbjct: 127 ERPD-VSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLV 185
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVA FI SEFV+ Y+G G VRD+F A++ AP+IIFIDEIDA+A R
Sbjct: 186 KAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKR-- 243
Query: 443 RFRIVSNDERE--QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
F + +RE + L +LLT+MDGFD + V V+ ATNR+D LDPAL RPGR DR +
Sbjct: 244 -FDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDR--KI 300
Query: 501 ETP---DKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGXXXXXXXXXXXXXXGR 557
E P D+ R + + ++ K L L+ ++DL +G R
Sbjct: 301 EFPSYRDRRQRRLVFQT-ITAKML-LSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVR 358
Query: 558 LNKVVVEKIDFIHAVERSI 576
++ V+ + D A R++
Sbjct: 359 KSRGVILQSDIEEAYARAV 377
WARNING: HSPs involving 476 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 731 672 0.00099 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 726
No. of states in DFA: 598 (64 KB)
Total size of DFA: 277 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 55.37u 0.13s 55.50t Elapsed: 00:00:02
Total cpu time: 55.43u 0.13s 55.56t Elapsed: 00:00:02
Start: Thu May 9 22:14:06 2013 End: Thu May 9 22:14:08 2013
WARNINGS ISSUED: 2