Query 004773
Match_columns 731
No_of_seqs 166 out of 265
Neff 2.9
Searched_HMMs 46136
Date Thu Mar 28 12:40:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004773.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004773hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0431 Auxilin-like protein a 100.0 8.7E-38 1.9E-42 335.7 12.5 99 629-727 353-451 (453)
2 smart00271 DnaJ DnaJ molecular 98.5 1.8E-07 3.9E-12 73.7 5.6 54 667-726 4-57 (60)
3 COG0484 DnaJ DnaJ-class molecu 98.5 1.1E-07 2.3E-12 102.3 5.4 52 667-725 7-58 (371)
4 KOG0713 Molecular chaperone (D 98.5 1.2E-07 2.7E-12 100.6 5.3 52 667-725 19-70 (336)
5 cd06257 DnaJ DnaJ domain or J- 98.5 2.8E-07 6.2E-12 71.2 5.4 52 667-725 3-54 (55)
6 PF00226 DnaJ: DnaJ domain; I 98.4 6E-07 1.3E-11 72.0 5.4 53 668-726 4-56 (64)
7 PRK14288 chaperone protein Dna 98.4 4.2E-07 9.1E-12 96.7 5.3 52 667-725 6-57 (369)
8 PRK09430 djlA Dna-J like membr 98.3 1.2E-06 2.5E-11 90.1 6.3 59 667-725 203-261 (267)
9 PRK14296 chaperone protein Dna 98.2 9.9E-07 2.1E-11 94.1 5.1 51 667-725 7-57 (372)
10 PRK14285 chaperone protein Dna 98.2 1.5E-06 3.2E-11 92.4 5.2 53 667-726 6-58 (365)
11 PRK14279 chaperone protein Dna 98.2 1.5E-06 3.3E-11 93.2 5.3 52 667-725 12-63 (392)
12 PRK14286 chaperone protein Dna 98.1 2.1E-06 4.6E-11 91.5 5.2 52 667-725 7-58 (372)
13 PRK14299 chaperone protein Dna 98.1 2.2E-06 4.7E-11 88.5 4.9 51 667-725 7-57 (291)
14 KOG0712 Molecular chaperone (D 98.1 2.2E-06 4.7E-11 91.5 4.9 48 668-725 8-55 (337)
15 PRK10266 curved DNA-binding pr 98.1 2.4E-06 5.3E-11 88.6 5.1 51 667-725 7-57 (306)
16 PRK14283 chaperone protein Dna 98.1 2.4E-06 5.2E-11 91.1 5.2 51 667-725 8-58 (378)
17 PRK14277 chaperone protein Dna 98.1 2.5E-06 5.3E-11 91.3 5.2 52 667-725 8-59 (386)
18 PRK14295 chaperone protein Dna 98.1 2.6E-06 5.6E-11 91.4 5.3 52 667-725 12-63 (389)
19 PRK10767 chaperone protein Dna 98.1 2.7E-06 5.9E-11 90.2 5.2 52 667-725 7-58 (371)
20 KOG0691 Molecular chaperone (D 98.1 3.3E-06 7.2E-11 88.8 5.5 50 669-725 10-59 (296)
21 PRK14278 chaperone protein Dna 98.1 3.1E-06 6.6E-11 90.5 5.0 51 667-725 6-56 (378)
22 PRK14276 chaperone protein Dna 98.1 3.4E-06 7.4E-11 90.1 5.2 51 667-725 7-57 (380)
23 PRK14294 chaperone protein Dna 98.1 3.5E-06 7.7E-11 89.4 5.2 52 667-725 7-58 (366)
24 PRK14287 chaperone protein Dna 98.1 3.8E-06 8.2E-11 89.6 5.2 51 667-725 7-57 (371)
25 PRK14284 chaperone protein Dna 98.1 3.9E-06 8.4E-11 89.9 5.2 52 667-725 4-55 (391)
26 KOG0718 Molecular chaperone (D 98.1 3.4E-06 7.4E-11 93.2 4.8 55 667-725 12-66 (546)
27 PRK14280 chaperone protein Dna 98.1 3.9E-06 8.5E-11 89.5 5.2 51 667-725 7-57 (376)
28 PRK14291 chaperone protein Dna 98.1 4.2E-06 9.2E-11 89.4 5.2 52 667-726 6-57 (382)
29 PRK14297 chaperone protein Dna 98.1 4.2E-06 9.1E-11 89.3 5.1 53 667-726 7-59 (380)
30 PRK14281 chaperone protein Dna 98.0 4.5E-06 9.7E-11 89.7 5.3 52 667-725 6-57 (397)
31 PTZ00037 DnaJ_C chaperone prot 98.0 4.4E-06 9.6E-11 90.9 5.1 48 667-725 31-78 (421)
32 PRK14282 chaperone protein Dna 98.0 5E-06 1.1E-10 88.4 5.2 53 667-725 7-59 (369)
33 PRK14301 chaperone protein Dna 98.0 5.5E-06 1.2E-10 88.4 5.2 52 667-725 7-58 (373)
34 PRK14298 chaperone protein Dna 98.0 5.5E-06 1.2E-10 88.6 4.8 51 667-725 8-58 (377)
35 KOG0716 Molecular chaperone (D 98.0 7.1E-06 1.5E-10 85.6 5.3 51 669-726 36-86 (279)
36 PRK14300 chaperone protein Dna 98.0 6.7E-06 1.5E-10 87.6 5.2 51 667-725 6-56 (372)
37 PRK14292 chaperone protein Dna 97.9 8.9E-06 1.9E-10 86.4 4.9 51 667-725 5-55 (371)
38 PRK14290 chaperone protein Dna 97.9 1E-05 2.3E-10 85.9 5.3 53 667-725 6-58 (365)
39 PRK14293 chaperone protein Dna 97.9 1.4E-05 2.9E-10 85.3 5.5 51 667-725 6-56 (374)
40 PHA03102 Small T antigen; Revi 97.9 1.4E-05 3.1E-10 77.2 5.0 45 671-726 12-58 (153)
41 COG2214 CbpA DnaJ-class molecu 97.9 1.9E-05 4.1E-10 72.3 5.3 52 669-726 11-62 (237)
42 PRK14289 chaperone protein Dna 97.8 1.7E-05 3.8E-10 84.7 5.2 52 667-725 8-59 (386)
43 KOG0719 Molecular chaperone (D 97.8 2.2E-05 4.9E-10 81.0 5.4 54 667-725 17-70 (264)
44 KOG0717 Molecular chaperone (D 97.7 2.9E-05 6.3E-10 85.9 4.7 53 667-725 11-63 (508)
45 PTZ00341 Ring-infected erythro 97.6 4.9E-05 1.1E-09 90.1 5.3 51 667-725 576-626 (1136)
46 PTZ00100 DnaJ chaperone protei 97.6 5E-05 1.1E-09 70.9 4.3 47 667-724 68-114 (116)
47 PRK05014 hscB co-chaperone Hsc 97.6 0.00011 2.4E-09 71.5 6.3 50 675-726 14-63 (171)
48 KOG0720 Molecular chaperone (D 97.6 5.4E-05 1.2E-09 83.7 4.1 51 667-725 238-288 (490)
49 PRK03578 hscB co-chaperone Hsc 97.5 0.00021 4.5E-09 70.1 6.3 50 675-726 19-68 (176)
50 TIGR00714 hscB Fe-S protein as 97.5 0.00018 3.8E-09 69.3 5.7 49 676-726 3-51 (157)
51 KOG0721 Molecular chaperone (D 97.4 0.00016 3.4E-09 74.1 5.2 52 668-726 103-154 (230)
52 PRK00294 hscB co-chaperone Hsc 97.4 0.00023 4.9E-09 69.9 5.7 50 675-726 17-66 (173)
53 PRK01356 hscB co-chaperone Hsc 97.4 0.00027 5.8E-09 68.7 5.9 53 670-726 8-62 (166)
54 KOG0715 Molecular chaperone (D 97.3 0.00035 7.7E-09 73.1 5.4 59 660-726 39-97 (288)
55 KOG0550 Molecular chaperone (D 97.1 0.00054 1.2E-08 75.7 5.5 93 627-725 329-428 (486)
56 TIGR03835 termin_org_DnaJ term 97.1 0.00048 1E-08 80.5 5.3 50 668-725 6-55 (871)
57 KOG1150 Predicted molecular ch 97.1 0.00048 1E-08 70.3 4.5 51 669-725 58-108 (250)
58 PHA02624 large T antigen; Prov 97.0 0.00054 1.2E-08 78.6 4.5 47 669-726 16-64 (647)
59 KOG0714 Molecular chaperone (D 96.9 0.00076 1.6E-08 65.3 3.5 48 670-723 9-56 (306)
60 COG5407 SEC63 Preprotein trans 96.4 0.0037 8E-08 69.9 4.6 83 639-726 74-158 (610)
61 TIGR02349 DnaJ_bact chaperone 96.2 0.0049 1.1E-07 65.3 4.4 31 668-698 4-34 (354)
62 KOG1789 Endocytosis protein RM 95.8 0.0088 1.9E-07 72.1 4.7 39 677-725 1298-1336(2235)
63 PRK01773 hscB co-chaperone Hsc 95.4 0.028 6E-07 55.5 5.8 50 675-726 15-64 (173)
64 KOG0722 Molecular chaperone (D 95.4 0.0097 2.1E-07 62.9 2.7 50 667-724 36-85 (329)
65 KOG0624 dsRNA-activated protei 94.9 0.029 6.3E-07 61.8 4.7 55 667-725 397-451 (504)
66 KOG0723 Molecular chaperone (D 91.8 0.27 5.9E-06 46.4 4.8 45 670-725 62-106 (112)
67 COG5269 ZUO1 Ribosome-associat 89.6 0.43 9.3E-06 51.4 4.5 47 676-727 58-104 (379)
68 COG1076 DjlA DnaJ-domain-conta 89.5 0.35 7.7E-06 47.2 3.6 56 668-723 117-172 (174)
69 KOG0568 Molecular chaperone (D 64.5 11 0.00024 40.4 5.0 52 667-726 50-102 (342)
70 PF14687 DUF4460: Domain of un 49.4 35 0.00076 32.1 5.2 47 676-725 6-52 (112)
71 PF05348 UMP1: Proteasome matu 36.5 14 0.0003 35.5 0.5 16 34-49 95-110 (130)
72 PF08628 Nexin_C: Sorting nexi 30.0 56 0.0012 29.6 3.3 71 647-719 37-110 (113)
73 PRK13798 putative OHCU decarbo 25.4 85 0.0019 31.3 3.8 66 640-722 35-109 (166)
74 PF08081 RBM1CTR: RBM1CTR (NUC 24.2 48 0.001 27.5 1.5 20 43-62 15-34 (45)
No 1
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=100.00 E-value=8.7e-38 Score=335.74 Aligned_cols=99 Identities=53% Similarity=0.921 Sum_probs=96.2
Q ss_pred chhHhHHHHHHHHhhcCCCCcHHHHHhcCccccCCCCCccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHH
Q 004773 629 PQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTY 708 (731)
Q Consensus 629 ~~~~d~Id~KI~~Wa~GKE~NIRALLSSLh~VLW~~s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~ 708 (731)
.++++.++.+|+.|+.|||+||||||||||+|||++|+|++|+|.|||+|++|||+||||||||||||++|++++++|||
T Consensus 353 ~r~~e~~d~~I~~W~~GKE~NIRALLSTLh~VLW~es~WqpVsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~ 432 (453)
T KOG0431|consen 353 SRLMEPLDEEIRRWSEGKEGNIRALLSTLHYVLWPESGWQPVSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKY 432 (453)
T ss_pred HhhcchHHHHHHHhcccccccHHHHHHHHhHhhcCccCcccCchhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhcc
Q 004773 709 IAEKVLIFCRRHGLISTHL 727 (731)
Q Consensus 709 IAe~VF~eLNEAYEVf~~~ 727 (731)
||+.||++|++||+.|...
T Consensus 433 Iaekvfd~l~eawn~f~~~ 451 (453)
T KOG0431|consen 433 IAEKVFDALSEAWNKFNQQ 451 (453)
T ss_pred HHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999753
No 2
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=98.52 E-value=1.8e-07 Score=73.65 Aligned_cols=54 Identities=19% Similarity=0.164 Sum_probs=46.2
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+-+||..-++..+||++|+++++.+|||++.+. ...++..|..|++||++...
T Consensus 4 y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~------~~~~~~~~~~l~~Ay~~L~~ 57 (60)
T smart00271 4 YEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD------KEEAEEKFKEINEAYEVLSD 57 (60)
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hHHHHHHHHHHHHHHHHHcC
Confidence 4557788889999999999999999999998742 34789999999999999753
No 3
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=98.50 E-value=1.1e-07 Score=102.34 Aligned_cols=52 Identities=15% Similarity=0.160 Sum_probs=46.0
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-++|..-+++++|||||||+++++|||+++... -|+..|.+||+||||..
T Consensus 7 YeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~-------~AeeKFKEI~eAYEVLs 58 (371)
T COG0484 7 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDK-------EAEEKFKEINEAYEVLS 58 (371)
T ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCH-------HHHHHHHHHHHHHHHhC
Confidence 45678999999999999999999999999998421 48999999999999964
No 4
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.49 E-value=1.2e-07 Score=100.59 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=47.0
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++=++|...++..+||+||||++|++||||++.+. -|...|..||.||+|..
T Consensus 19 YelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp-------~A~e~F~~in~AYEVLs 70 (336)
T KOG0713|consen 19 YELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDP-------NANEKFKEINAAYEVLS 70 (336)
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCH-------HHHHHHHHHHHHHHHhc
Confidence 56789999999999999999999999999998643 48999999999999963
No 5
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=98.46 E-value=2.8e-07 Score=71.17 Aligned_cols=52 Identities=19% Similarity=0.190 Sum_probs=44.6
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
|+=+|+..-++..+||++|+++++.+|||+..+. ..+...|..|++||++..
T Consensus 3 y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~-------~~~~~~~~~l~~Ay~~L~ 54 (55)
T cd06257 3 YDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-------PEAEEKFKEINEAYEVLS 54 (55)
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-------HHHHHHHHHHHHHHHHhc
Confidence 3456777888999999999999999999998742 468999999999999864
No 6
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=98.37 E-value=6e-07 Score=72.01 Aligned_cols=53 Identities=19% Similarity=0.147 Sum_probs=46.2
Q ss_pred cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
+=+||..-++..+||++|++++..+||||+.+.. -.|+..|..|++||++.+.
T Consensus 4 ~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~------~~~~~~~~~i~~Ay~~L~~ 56 (64)
T PF00226_consen 4 EILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDE------AEAEEKFARINEAYEILSD 56 (64)
T ss_dssp HHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTH------HHHHHHHHHHHHHHHHHHS
T ss_pred HHCCCCCCCCHHHHHHHHHhhhhccccccchhhh------hhhhHHHHHHHHHHHHhCC
Confidence 4578888999999999999999999999997532 3588999999999999864
No 7
>PRK14288 chaperone protein DnaJ; Provisional
Probab=98.35 E-value=4.2e-07 Score=96.68 Aligned_cols=52 Identities=19% Similarity=0.246 Sum_probs=45.2
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
|+=++|..-+++.+||+||||+++++||||++... .|+..|.+|++||+|..
T Consensus 6 Y~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~-------~a~~~f~~i~~AYevLs 57 (369)
T PRK14288 6 YEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-------EAEEKFKLINEAYGVLS 57 (369)
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcc-------HHHHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999986421 37889999999999975
No 8
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=98.28 E-value=1.2e-06 Score=90.11 Aligned_cols=59 Identities=22% Similarity=0.256 Sum_probs=51.7
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-+++..-+++.+||++|||+++.+||||+..++.+.+..-.|+..|..|++||++-.
T Consensus 203 y~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~ 261 (267)
T PRK09430 203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIK 261 (267)
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 45568888999999999999999999999998766666666689999999999999865
No 9
>PRK14296 chaperone protein DnaJ; Provisional
Probab=98.24 E-value=9.9e-07 Score=94.07 Aligned_cols=51 Identities=12% Similarity=0.171 Sum_probs=44.3
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-++|..-++..+||+||||+++++||||++. . -|+..|.+|++||+|..
T Consensus 7 Y~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~-~-------~a~~~F~~i~~AyevLs 57 (372)
T PRK14296 7 YEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-P-------DAHDKMVEINEAADVLL 57 (372)
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c-------hHHHHHHHHHHHHHHhc
Confidence 456788899999999999999999999999863 1 27889999999999864
No 10
>PRK14285 chaperone protein DnaJ; Provisional
Probab=98.20 E-value=1.5e-06 Score=92.41 Aligned_cols=53 Identities=19% Similarity=0.241 Sum_probs=45.5
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+-++|...++..+||+||||+++++||||++... -|+..|.+|++||+|...
T Consensus 6 y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~d 58 (365)
T PRK14285 6 YEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK-------EAESIFKEATEAYEVLID 58 (365)
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH-------HHHHHHHHHHHHHHHHcC
Confidence 45678889999999999999999999999986421 378899999999999764
No 11
>PRK14279 chaperone protein DnaJ; Provisional
Probab=98.19 E-value=1.5e-06 Score=93.19 Aligned_cols=52 Identities=19% Similarity=0.229 Sum_probs=45.2
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
|+-++|..-++..+||+||||+++++||||++... -|+..|.+|++||+|..
T Consensus 12 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vLs 63 (392)
T PRK14279 12 YKELGVSSDASAEEIKKAYRKLARELHPDANPGDP-------AAEERFKAVSEAHDVLS 63 (392)
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCh-------HHHHHHHHHHHHHHHhc
Confidence 56788999999999999999999999999986421 37889999999999864
No 12
>PRK14286 chaperone protein DnaJ; Provisional
Probab=98.15 E-value=2.1e-06 Score=91.49 Aligned_cols=52 Identities=17% Similarity=0.201 Sum_probs=44.7
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-++|..-++..+||+|||++++++||||++... .|+..|.+|++||+|..
T Consensus 7 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~ 58 (372)
T PRK14286 7 YDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-------ESEEKFKEATEAYEILR 58 (372)
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCch-------HHHHHHHHHHHHHHHhc
Confidence 45578888999999999999999999999986421 37889999999999975
No 13
>PRK14299 chaperone protein DnaJ; Provisional
Probab=98.14 E-value=2.2e-06 Score=88.52 Aligned_cols=51 Identities=14% Similarity=0.131 Sum_probs=44.0
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-++|..-+++++||+||||+++++|||+++.. -|+..|.+||+||+|..
T Consensus 7 y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~--------~~~~~f~~i~~Ay~~L~ 57 (291)
T PRK14299 7 YAILGVPKNASQDEIKKAFKKLARKYHPDVNKSP--------GAEEKFKEINEAYTVLS 57 (291)
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh--------hHHHHHHHHHHHHHHhc
Confidence 4567888899999999999999999999998631 27789999999999975
No 14
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.13 E-value=2.2e-06 Score=91.53 Aligned_cols=48 Identities=19% Similarity=0.187 Sum_probs=42.7
Q ss_pred cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
.-+++...++.++|||||||+++++||||++. |...|.+|++||||..
T Consensus 8 ~il~v~~~As~~eikkayrkla~k~HpDkn~~----------~~ekfkei~~AyevLs 55 (337)
T KOG0712|consen 8 DILGVSPDASEEEIKKAYRKLALKYHPDKNPD----------AGEKFKEISQAYEVLS 55 (337)
T ss_pred eeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc----------HHHHHHHHHHHHHHhc
Confidence 34578889999999999999999999999983 7789999999999864
No 15
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.13 E-value=2.4e-06 Score=88.55 Aligned_cols=51 Identities=14% Similarity=0.102 Sum_probs=44.7
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
|+-+++...++.++||+||||+++++|||++... .|+..|.+|++||+|..
T Consensus 7 y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~--------~~~~~f~~i~~Ay~~L~ 57 (306)
T PRK10266 7 YAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP--------DAEARFKEVAEAWEVLS 57 (306)
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHhh
Confidence 5667889999999999999999999999997521 48899999999999975
No 16
>PRK14283 chaperone protein DnaJ; Provisional
Probab=98.13 E-value=2.4e-06 Score=91.05 Aligned_cols=51 Identities=16% Similarity=0.172 Sum_probs=45.1
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-++|..-++..+||+||||+++++||||++. . -|+..|.+|++||+|..
T Consensus 8 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~-------~a~~~f~~i~~Ay~~Ls 58 (378)
T PRK14283 8 YEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-E-------GAEEKFKEISEAYAVLS 58 (378)
T ss_pred HHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c-------cHHHHHHHHHHHHHHhc
Confidence 567789999999999999999999999999863 1 37889999999999975
No 17
>PRK14277 chaperone protein DnaJ; Provisional
Probab=98.13 E-value=2.5e-06 Score=91.29 Aligned_cols=52 Identities=15% Similarity=0.121 Sum_probs=45.4
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
|+-++|..-++..+||+||||+++++||||++... .|+..|.+||+||+|..
T Consensus 8 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~ 59 (386)
T PRK14277 8 YEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-------EAEQKFKEINEAYEILS 59 (386)
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch-------HHHHHHHHHHHHHHHhC
Confidence 56778999999999999999999999999986321 37889999999999975
No 18
>PRK14295 chaperone protein DnaJ; Provisional
Probab=98.12 E-value=2.6e-06 Score=91.40 Aligned_cols=52 Identities=17% Similarity=0.154 Sum_probs=45.5
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-++|..-++..+||+||||+++++||||++... .|+..|.+|++||+|..
T Consensus 12 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~ 63 (389)
T PRK14295 12 YKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-------KAEERFKEISEAYDVLS 63 (389)
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch-------hHHHHHHHHHHHHHHHC
Confidence 56788999999999999999999999999986421 38899999999999974
No 19
>PRK10767 chaperone protein DnaJ; Provisional
Probab=98.12 E-value=2.7e-06 Score=90.22 Aligned_cols=52 Identities=15% Similarity=0.215 Sum_probs=45.1
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
|+-++|..-++..+||+||||+++++||||++.. ..|+..|.+|++||+|..
T Consensus 7 y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~~L~ 58 (371)
T PRK10767 7 YEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD-------KEAEEKFKEIKEAYEVLS 58 (371)
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-------HHHHHHHHHHHHHHHHhc
Confidence 5677888899999999999999999999998632 138889999999999864
No 20
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.10 E-value=3.3e-06 Score=88.79 Aligned_cols=50 Identities=18% Similarity=0.176 Sum_probs=44.6
Q ss_pred ccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 669 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 669 pVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
=+||...+++++||||||+.+|.+||||++.++ -|..-|..|.+||+|.+
T Consensus 10 lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP-------~A~ekFq~L~eAy~VL~ 59 (296)
T KOG0691|consen 10 LLGISEDATDAEIKKAYRKKALQYHPDKNPGDP-------QAAEKFQELSEAYEVLS 59 (296)
T ss_pred HhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh-------HHHHHHHHHHHHHHHhc
Confidence 357889999999999999999999999998643 28999999999999975
No 21
>PRK14278 chaperone protein DnaJ; Provisional
Probab=98.09 E-value=3.1e-06 Score=90.46 Aligned_cols=51 Identities=18% Similarity=0.124 Sum_probs=44.5
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
|+-++|..-++.++||+||||+++++|||+++. . -|+..|.+|++||+|..
T Consensus 6 y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~----~----~a~~~f~~i~~Ay~vL~ 56 (378)
T PRK14278 6 YGLLGVSRNASDAEIKRAYRKLARELHPDVNPD----E----EAQEKFKEISVAYEVLS 56 (378)
T ss_pred ceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc----H----HHHHHHHHHHHHHHHhc
Confidence 456788889999999999999999999999862 1 37889999999999974
No 22
>PRK14276 chaperone protein DnaJ; Provisional
Probab=98.08 E-value=3.4e-06 Score=90.07 Aligned_cols=51 Identities=16% Similarity=0.135 Sum_probs=44.2
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-++|..-++..+||+||||+++++|||+++.. -|+..|.+|++||+|..
T Consensus 7 y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~--------~a~~~f~~i~~Ay~vL~ 57 (380)
T PRK14276 7 YDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEP--------GAEEKYKEVQEAYETLS 57 (380)
T ss_pred HHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------CHHHHHHHHHHHHHHhc
Confidence 4567888999999999999999999999998631 26788999999999965
No 23
>PRK14294 chaperone protein DnaJ; Provisional
Probab=98.08 E-value=3.5e-06 Score=89.44 Aligned_cols=52 Identities=17% Similarity=0.227 Sum_probs=44.6
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
|+=++|..-++.++||+||||+++++||||++... .|+..|.+|++||+|..
T Consensus 7 y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~~~~~f~~~~~Ay~vL~ 58 (366)
T PRK14294 7 YEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-------EAEELFKEAAEAYEVLS 58 (366)
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCch-------HHHHHHHHHHHHHHHhc
Confidence 45678888899999999999999999999986421 37889999999999875
No 24
>PRK14287 chaperone protein DnaJ; Provisional
Probab=98.07 E-value=3.8e-06 Score=89.59 Aligned_cols=51 Identities=18% Similarity=0.111 Sum_probs=44.0
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-++|..-++..+||+||||+++++|||+++. . -|+..|.+||+||+|..
T Consensus 7 y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-~-------~~~~~f~~i~~Ay~~L~ 57 (371)
T PRK14287 7 YEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-P-------DAEDKFKEVKEAYDTLS 57 (371)
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-h-------hHHHHHHHHHHHHHHhC
Confidence 456788999999999999999999999999852 1 27789999999999974
No 25
>PRK14284 chaperone protein DnaJ; Provisional
Probab=98.07 E-value=3.9e-06 Score=89.93 Aligned_cols=52 Identities=19% Similarity=0.222 Sum_probs=44.7
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
|+=++|..-+++.+||+||||+++++|||+++... .|+..|.+|++||+|..
T Consensus 4 y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~ 55 (391)
T PRK14284 4 YTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-------EAEKRFKEVSEAYEVLS 55 (391)
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCch-------HHHHHHHHHHHHHHHhc
Confidence 45578888999999999999999999999987421 37889999999999964
No 26
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.06 E-value=3.4e-06 Score=93.15 Aligned_cols=55 Identities=20% Similarity=0.233 Sum_probs=48.9
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
+.-+++..-++..+||+||||.|+.+||||+. +++||-.|+.+|..|.+||||..
T Consensus 12 Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~----dpd~K~~AE~~F~~i~~AyEVLs 66 (546)
T KOG0718|consen 12 YALLNLPKDATDEEIKKAYRRLSRLFHPDKHT----DPDQKKAAEEKFQRIQRAYEVLS 66 (546)
T ss_pred HHHhCCCcccCHHHHHHHHHHHHHhcCCcccC----ChhHHHHHHHHHHHHHHHHHHhc
Confidence 34567788899999999999999999999997 36899999999999999999863
No 27
>PRK14280 chaperone protein DnaJ; Provisional
Probab=98.06 E-value=3.9e-06 Score=89.48 Aligned_cols=51 Identities=14% Similarity=0.171 Sum_probs=44.3
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-++|..-++..+||+||||+++++||||++.. -|+..|.+|++||+|..
T Consensus 7 y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~--------~a~~~f~~i~~Ay~vL~ 57 (376)
T PRK14280 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEE--------GADEKFKEISEAYEVLS 57 (376)
T ss_pred HHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHhc
Confidence 4567888999999999999999999999998631 27789999999999975
No 28
>PRK14291 chaperone protein DnaJ; Provisional
Probab=98.05 E-value=4.2e-06 Score=89.42 Aligned_cols=52 Identities=13% Similarity=0.148 Sum_probs=44.7
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
++-++|..-++..+||+||||+++++||||++.. -|+..|..|++||+|...
T Consensus 6 Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~--------~~~~~f~~i~~Ay~vLsd 57 (382)
T PRK14291 6 YEILGVSRNATQEEIKKAYRRLARKYHPDFNKNP--------EAEEKFKEINEAYQVLSD 57 (382)
T ss_pred HHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc--------cHHHHHHHHHHHHHHhcC
Confidence 4567888899999999999999999999998631 267889999999999753
No 29
>PRK14297 chaperone protein DnaJ; Provisional
Probab=98.05 E-value=4.2e-06 Score=89.28 Aligned_cols=53 Identities=17% Similarity=0.219 Sum_probs=45.1
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
++-++|..-++..+||+||||+++++||||++... .|+..|.+||+||+|...
T Consensus 7 y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~d 59 (380)
T PRK14297 7 YEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-------EAEEKFKEINEAYQVLSD 59 (380)
T ss_pred HHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcH-------HHHHHHHHHHHHHHHhcC
Confidence 45678888999999999999999999999986421 378899999999999753
No 30
>PRK14281 chaperone protein DnaJ; Provisional
Probab=98.05 E-value=4.5e-06 Score=89.74 Aligned_cols=52 Identities=19% Similarity=0.257 Sum_probs=44.2
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++=++|..-++..+||+||||+++++||||++... .|+..|.+||+||+|..
T Consensus 6 y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~ 57 (397)
T PRK14281 6 YEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-------EAEEHFKEVNEAYEVLS 57 (397)
T ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch-------HHHHHHHHHHHHHHHhh
Confidence 45567888899999999999999999999986421 37789999999999975
No 31
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=98.04 E-value=4.4e-06 Score=90.92 Aligned_cols=48 Identities=19% Similarity=0.219 Sum_probs=41.9
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-++|..-+++++||+||||+++++||||++. +..|.+|++||+|..
T Consensus 31 Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~-----------~e~F~~i~~AYevLs 78 (421)
T PTZ00037 31 YEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----------PEKFKEISRAYEVLS 78 (421)
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch-----------HHHHHHHHHHHHHhc
Confidence 466788899999999999999999999999741 268999999999974
No 32
>PRK14282 chaperone protein DnaJ; Provisional
Probab=98.03 E-value=5e-06 Score=88.41 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=45.0
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-++|..-++..+||+||||+++++|||+++.. .-.|+..|.+||+||+|..
T Consensus 7 y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~~a~~~f~~i~~Ay~vL~ 59 (369)
T PRK14282 7 YEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEN------RKEAEQKFKEIQEAYEVLS 59 (369)
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccc------hhHHHHHHHHHHHHHHHhc
Confidence 4567888899999999999999999999998631 1138899999999999964
No 33
>PRK14301 chaperone protein DnaJ; Provisional
Probab=98.02 E-value=5.5e-06 Score=88.44 Aligned_cols=52 Identities=17% Similarity=0.217 Sum_probs=44.2
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-++|..-++..+||+||||+++++||||++... -|+..|..|++||+|..
T Consensus 7 y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~ 58 (373)
T PRK14301 7 YEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNP-------EAEQKFKEAAEAYEVLR 58 (373)
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCCh-------HHHHHHHHHHHHHHHhc
Confidence 45667888899999999999999999999986421 37788999999999975
No 34
>PRK14298 chaperone protein DnaJ; Provisional
Probab=98.00 E-value=5.5e-06 Score=88.63 Aligned_cols=51 Identities=20% Similarity=0.217 Sum_probs=44.0
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
|+=++|..-++..+||+||||+++++|||+++. . -|+..|.+||+||+|..
T Consensus 8 y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~-------~~~~~f~~i~~Ay~vL~ 58 (377)
T PRK14298 8 YEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE-P-------DAEEKFKEISEAYAVLS 58 (377)
T ss_pred HHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC-h-------hHHHHHHHHHHHHHHhc
Confidence 456788899999999999999999999999852 1 27789999999999964
No 35
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.99 E-value=7.1e-06 Score=85.62 Aligned_cols=51 Identities=22% Similarity=0.204 Sum_probs=43.4
Q ss_pred ccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 669 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 669 pVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
-+|+...++..+|||+||++++++||||++... -|...|++||+||+|.+.
T Consensus 36 VLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P-------~~~dkf~eIN~Ay~ILsD 86 (279)
T KOG0716|consen 36 VLGLPKTATKDEIKKAYRKLALKYHPDKNGDNP-------EATDKFKEINTAYAILSD 86 (279)
T ss_pred HhCCCcccchHHHHHHHHHHHHHhCCCcCCCCc-------hhHHHHHHHHHHHHHhcC
Confidence 346777899999999999999999999997532 266889999999999874
No 36
>PRK14300 chaperone protein DnaJ; Provisional
Probab=97.99 E-value=6.7e-06 Score=87.64 Aligned_cols=51 Identities=18% Similarity=0.135 Sum_probs=44.6
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
|+-++|..-+++.+||+||||+++++|||+++. . .|+..|.+|++||+|..
T Consensus 6 y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~-~-------~~~~~f~~i~~Ay~~L~ 56 (372)
T PRK14300 6 YQILGVSKTASQADLKKAYLKLAKQYHPDTTDA-K-------DAEKKFKEINAAYDVLK 56 (372)
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c-------CHHHHHHHHHHHHHHhh
Confidence 677889999999999999999999999999862 1 26779999999999865
No 37
>PRK14292 chaperone protein DnaJ; Provisional
Probab=97.93 E-value=8.9e-06 Score=86.38 Aligned_cols=51 Identities=18% Similarity=0.264 Sum_probs=43.8
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++=++|..-++..+||+||||+++++|||++... .|+..|..||+||+|..
T Consensus 5 y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~--------~a~~~~~~i~~Ay~vL~ 55 (371)
T PRK14292 5 YELLGVSRTASADEIKSAYRKLALKYHPDRNKEK--------GAAEKFAQINEAYAVLS 55 (371)
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCh--------hHHHHHHHHHHHHHHhc
Confidence 3456788889999999999999999999998631 37789999999999975
No 38
>PRK14290 chaperone protein DnaJ; Provisional
Probab=97.93 E-value=1e-05 Score=85.90 Aligned_cols=53 Identities=13% Similarity=0.092 Sum_probs=45.2
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-+++..-++.++||+||||+++++|||+++.. ...|+..|..|++||+|..
T Consensus 6 y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~~a~~~f~~i~~Ay~~L~ 58 (365)
T PRK14290 6 YKILGVDRNASQEDIKKAFRELAKKWHPDLHPGN------KAEAEEKFKEISEAYEVLS 58 (365)
T ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hhHHHHHHHHHHHHHHHhc
Confidence 4567888899999999999999999999997631 1248899999999999975
No 39
>PRK14293 chaperone protein DnaJ; Provisional
Probab=97.89 E-value=1.4e-05 Score=85.30 Aligned_cols=51 Identities=18% Similarity=0.191 Sum_probs=44.1
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
|+=+++...+++.+||+|||++++++|||+++.. .|+..|..|++||+|..
T Consensus 6 y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~--------~a~~~f~~i~~Ay~vL~ 56 (374)
T PRK14293 6 YEILGVSRDADKDELKRAYRRLARKYHPDVNKEP--------GAEDRFKEINRAYEVLS 56 (374)
T ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc--------CHHHHHHHHHHHHHHHh
Confidence 5567888899999999999999999999998631 27789999999999975
No 40
>PHA03102 Small T antigen; Reviewed
Probab=97.89 E-value=1.4e-05 Score=77.23 Aligned_cols=45 Identities=18% Similarity=0.090 Sum_probs=37.1
Q ss_pred cccccc--CchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 671 PLVDII--EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 671 gmsDLv--tPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
||..-+ +..+||+|||++++.+||||.. .+..|.+||+||++...
T Consensus 12 Gl~~~A~~s~~eIKkAYr~la~~~HPDkgg-----------~~e~~k~in~Ay~~L~d 58 (153)
T PHA03102 12 GLPRSAWGNLPLMRKAYLRKCLEFHPDKGG-----------DEEKMKELNTLYKKFRE 58 (153)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCcCCCc-----------hhHHHHHHHHHHHHHhh
Confidence 455556 8899999999999999999953 13588999999999864
No 41
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.87 E-value=1.9e-05 Score=72.25 Aligned_cols=52 Identities=19% Similarity=0.188 Sum_probs=43.9
Q ss_pred ccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 669 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 669 pVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
=++|..-++..+||++|||+++++|||+++... . .|+..|..+++||+|..-
T Consensus 11 iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~---~---~a~~~f~~i~~Ay~vLsd 62 (237)
T COG2214 11 ILGVPPNASLEEIKKAYRKLALKYHPDRNPGDP---K---VAEEKFKEINEAYEILSD 62 (237)
T ss_pred HhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch---h---HHHHHHHHHHHHHHHhhC
Confidence 356667888999999999999999999998532 1 689999999999998753
No 42
>PRK14289 chaperone protein DnaJ; Provisional
Probab=97.84 E-value=1.7e-05 Score=84.70 Aligned_cols=52 Identities=17% Similarity=0.215 Sum_probs=44.8
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
|+-++|..-++..+||+||||+++++||||++... .|+..|..|++||+|..
T Consensus 8 y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~-------~a~~~f~~i~~Ay~~L~ 59 (386)
T PRK14289 8 YEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK-------EAEEKFKEAAEAYDVLS 59 (386)
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCh-------HHHHHHHHHHHHHHHhc
Confidence 46678888999999999999999999999986421 37889999999999875
No 43
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.82 E-value=2.2e-05 Score=80.96 Aligned_cols=54 Identities=19% Similarity=0.244 Sum_probs=48.0
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
+.=+||..-+++..|++||+|+.|.+||||++ .|++.-|...|+.|+.||.|++
T Consensus 17 YevLGVer~a~~~eIrkAY~klal~~HPDk~~-----eed~~ea~~kFq~l~k~y~iLs 70 (264)
T KOG0719|consen 17 YEVLGVERDATDKEIRKAYHKLALRLHPDKNH-----EEDKVEATEKFQQLQKAYQILS 70 (264)
T ss_pred HHHhhhcccCCHHHHHHHHHHHHHHhCCCcch-----hhhHHHHHHHHHHHHHHHHHhh
Confidence 45568888999999999999999999999986 4666789999999999999985
No 44
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.72 E-value=2.9e-05 Score=85.86 Aligned_cols=53 Identities=17% Similarity=0.280 Sum_probs=44.8
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
+.-++|..-+++.+||++|||++|.+||||++.. ++ -|..+|..|+.||+|..
T Consensus 11 YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~---ie---eat~~F~~i~aAYeVLS 63 (508)
T KOG0717|consen 11 YEVLGVERDADDDEIKKNYRKLALQYHPDKNPDR---IE---EATQQFQLIQAAYEVLS 63 (508)
T ss_pred HHHhcccccCCHHHHHHHHHHHHHhhCCCCCCcc---HH---HHHHHHHHHHHHHHHhc
Confidence 3456788889999999999999999999998632 22 48999999999999964
No 45
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=97.65 E-value=4.9e-05 Score=90.07 Aligned_cols=51 Identities=10% Similarity=-0.075 Sum_probs=45.1
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
+.-+|+..-++..+||+||||+++++||||++.. .|...|..|++||+|..
T Consensus 576 YdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~--------~A~ekFq~I~EAYeVLS 626 (1136)
T PTZ00341 576 YDILGVGVNADMKEISERYFKLAENYYPPKRSGN--------EGFHKFKKINEAYQILG 626 (1136)
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--------hHHHHHHHHHHHHHHhC
Confidence 5778999999999999999999999999998641 27789999999999975
No 46
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=97.64 E-value=5e-05 Score=70.90 Aligned_cols=47 Identities=13% Similarity=0.187 Sum_probs=40.3
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIS 724 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf 724 (731)
++-+++..-++.++||++||++++.+||||. + + ..+|..||+||++.
T Consensus 68 y~ILGv~~~As~~eIkkaYRrLa~~~HPDkg---G-s-------~~~~~kIneAyevL 114 (116)
T PTZ00100 68 YKILNISPTASKERIREAHKQLMLRNHPDNG---G-S-------TYIASKVNEAKDLL 114 (116)
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC---C-C-------HHHHHHHHHHHHHH
Confidence 6778899999999999999999999999984 2 1 24678999999985
No 47
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=97.60 E-value=0.00011 Score=71.46 Aligned_cols=50 Identities=18% Similarity=0.193 Sum_probs=41.6
Q ss_pred ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 675 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 675 LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
-++..+||++||+++..+||||.... +...+.+|...|..||+||+|...
T Consensus 14 ~~d~~~L~~~yr~l~~~~HPDk~~~~--~~~~~~~a~~~s~~iN~AY~~L~d 63 (171)
T PRK05014 14 DIDTQLLASRYQELQRQFHPDKFANA--SERERLLAVQQAATINDAYQTLKH 63 (171)
T ss_pred CCCHHHHHHHHHHHHHHhCcCCCCCC--cHHHHHHHHHHHHHHHHHHHHHCC
Confidence 47789999999999999999998753 234455788899999999999763
No 48
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.57 E-value=5.4e-05 Score=83.74 Aligned_cols=51 Identities=20% Similarity=0.202 Sum_probs=45.4
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
+.-+|+..-++.++|||.|||.+..|||||+.+. .|+.+|..|+.||+|--
T Consensus 238 YsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~--------~A~Eafk~Lq~Afevig 288 (490)
T KOG0720|consen 238 YSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIP--------RAEEAFKKLQVAFEVIG 288 (490)
T ss_pred hhhcCCCCCCCHHHHHHHHHhhceEeCCCccCCh--------hHHHHHHHHHHHHHHhc
Confidence 5667888889999999999999999999999753 59999999999999854
No 49
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=97.47 E-value=0.00021 Score=70.14 Aligned_cols=50 Identities=14% Similarity=0.202 Sum_probs=42.0
Q ss_pred ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 675 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 675 LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
-+++.+|+++||++...+||||..+.+ ...+.+|...+..||+||+|..+
T Consensus 19 ~~d~~~L~~~yr~lq~~~HPD~~~~~~--~~e~~~a~~~s~~iN~AY~tL~~ 68 (176)
T PRK03578 19 ALDEAALDAAYRTVQAQVHPDRFAAAG--DAEKRVAMQWATRANEAYQTLRD 68 (176)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCC--HHHHHHHHHHHHHHHHHHHHhCC
Confidence 478899999999999999999997532 34455788889999999999875
No 50
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=97.47 E-value=0.00018 Score=69.27 Aligned_cols=49 Identities=18% Similarity=0.171 Sum_probs=40.7
Q ss_pred cCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 676 IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 676 vtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
+++.+|+++||++...+||||..+.+ ...+.+|...|..||+||+|...
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~--~~~~~~a~~~s~~iN~AY~~L~~ 51 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGS--AQEQLAAVQQSTTLNQAYQTLKD 51 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCC--hhhhHHHHHHHHHHHHHHHHhCC
Confidence 57789999999999999999986533 33345788899999999999864
No 51
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.45 E-value=0.00016 Score=74.06 Aligned_cols=52 Identities=17% Similarity=0.159 Sum_probs=42.8
Q ss_pred cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
.=+|+..-++.++||||||++.+++||||++... --+.-|+.|++||+.-|.
T Consensus 103 EILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~-------~~e~~~~~I~KAY~aLTD 154 (230)
T KOG0721|consen 103 EILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEE-------GDEEFFEAIAKAYQALTD 154 (230)
T ss_pred HhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcc-------hhHHHHHHHHHHHHHhcc
Confidence 4578999999999999999999999999987422 135678889999887764
No 52
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=97.42 E-value=0.00023 Score=69.88 Aligned_cols=50 Identities=10% Similarity=0.085 Sum_probs=41.6
Q ss_pred ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 675 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 675 LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
-++..+|+++||++...+||||..+.+ ...+.+|...|..||+||+|...
T Consensus 17 ~id~~~L~~~Yr~Lq~~~HPDk~~~~~--~~e~~~a~~~s~~IN~AY~~L~~ 66 (173)
T PRK00294 17 RLDLDQLATRYRELAREVHPDRFADAP--EREQRLALERSASLNEAYQTLKS 66 (173)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCc--HHHHHHHHHHHHHHHHHHHHhCC
Confidence 478899999999999999999987532 33345788889999999999764
No 53
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=97.40 E-value=0.00027 Score=68.74 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=42.0
Q ss_pred cccccc--cCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 670 VPLVDI--IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 670 VgmsDL--vtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
.||..- ++..+|+++|+++.+.+||||... ...+..|...|..||+||+|...
T Consensus 8 lgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~----~~~k~~~~~~s~~in~AY~~L~d 62 (166)
T PRK01356 8 LGLPQEYNIDLKILEKQYFAMQVKYHPDKAKT----LQEKEQNLIIASELNNAYSTLKD 62 (166)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHHHHHHHhCC
Confidence 344443 778999999999999999999752 34455677789999999999763
No 54
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.26 E-value=0.00035 Score=73.07 Aligned_cols=59 Identities=19% Similarity=0.115 Sum_probs=50.2
Q ss_pred ccCCCCCccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 660 ILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 660 VLW~~s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
+.|...-.+-+|+..-++..+||+||++++.++|||-+... .|+..|++|.+||||..-
T Consensus 39 ~~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~--------~a~~kF~eI~~AYEiLsd 97 (288)
T KOG0715|consen 39 IISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK--------EASKKFKEISEAYEILSD 97 (288)
T ss_pred cCCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc--------chhhHHHHHHHHHHHhcC
Confidence 45544345778999999999999999999999999999753 589999999999999653
No 55
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.15 E-value=0.00054 Score=75.67 Aligned_cols=93 Identities=20% Similarity=0.208 Sum_probs=68.5
Q ss_pred CCchhHhHHHHHHHHhhc----CCCCcHHHHHhcCccccCC---CCCccccccccccCchhHHHHHHHHHhhcCCCccCC
Q 004773 627 NDPQEFQAIDVQIRKWSN----GKEGNIRSLLSTLQYILWP---ASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQ 699 (731)
Q Consensus 627 ~~~~~~d~Id~KI~~Wa~----GKE~NIRALLSSLh~VLW~---~s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q 699 (731)
+-|...++.+.-|+.... -+.-+||.+|--.+.-|=- -.-++-+|+..+++...|||||||..|.+||||+..
T Consensus 329 ~c~l~le~~e~AV~d~~~a~q~~~s~e~r~~l~~A~~aLkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~ag 408 (486)
T KOG0550|consen 329 NCHLALEKWEEAVEDYEKAMQLEKDCEIRRTLREAQLALKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAG 408 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcc
Confidence 344555555555555442 3335688888776665531 112478899999999999999999999999999974
Q ss_pred CCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 700 KGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 700 ~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
. ++-|+..|+++-+||.|-.
T Consensus 409 s------q~eaE~kFkevgeAy~il~ 428 (486)
T KOG0550|consen 409 S------QKEAEAKFKEVGEAYTILS 428 (486)
T ss_pred h------hHHHHHHHHHHHHHHHHhc
Confidence 2 5679999999999999853
No 56
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=97.14 E-value=0.00048 Score=80.45 Aligned_cols=50 Identities=12% Similarity=0.164 Sum_probs=42.7
Q ss_pred cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
+=+||...++..+||++||++++++||||+.. . .|+..|..|++||++..
T Consensus 6 eVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~-------eAeekFqeINEAYEVLS 55 (871)
T TIGR03835 6 EVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-P-------DAASIFAEINEANDVLS 55 (871)
T ss_pred HhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-h-------hHHHHHHHHHHHHHHhC
Confidence 44677888999999999999999999999863 1 36788999999999875
No 57
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.12 E-value=0.00048 Score=70.34 Aligned_cols=51 Identities=18% Similarity=0.275 Sum_probs=42.5
Q ss_pred ccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 669 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 669 pVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
-+.|..-++-.+||+-||++.+.|||||++.+ . .-|++.|++|..||.+..
T Consensus 58 VLqIdpev~~edikkryRklSilVHPDKN~Dd---~---~rAqkAFdivkKA~k~l~ 108 (250)
T KOG1150|consen 58 VLQIDPEVTDEDIKKRYRKLSILVHPDKNPDD---A---ERAQKAFDIVKKAYKLLE 108 (250)
T ss_pred HHhcCCCCCHHHHHHHHHhhheeecCCCCccc---H---HHHHHHHHHHHHHHHHHh
Confidence 34566678889999999999999999999853 1 269999999999998764
No 58
>PHA02624 large T antigen; Provisional
Probab=97.04 E-value=0.00054 Score=78.60 Aligned_cols=47 Identities=15% Similarity=0.024 Sum_probs=38.2
Q ss_pred cccccccc--CchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 669 PVPLVDII--EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 669 pVgmsDLv--tPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
-+|+..-+ +..+||+||||+++++||||.. ++..|.+||+||++...
T Consensus 16 lLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG-----------deekfk~Ln~AYevL~d 64 (647)
T PHA02624 16 LLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG-----------DEEKMKRLNSLYKKLQE 64 (647)
T ss_pred HcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-----------cHHHHHHHHHHHHHHhc
Confidence 34555556 8899999999999999999952 24679999999999864
No 59
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=96.90 E-value=0.00076 Score=65.26 Aligned_cols=48 Identities=21% Similarity=0.241 Sum_probs=37.7
Q ss_pred cccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhh
Q 004773 670 VPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLI 723 (731)
Q Consensus 670 VgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEV 723 (731)
+++..-++..+||+||+++++++||||+.. . +..|+..|.++++||+|
T Consensus 9 l~i~~~as~~~i~ka~~~~a~~~hpdk~~~-----~-~~~~~~~~~~~~ea~~~ 56 (306)
T KOG0714|consen 9 LGIARSASEEDIKKAYRKLALKYHPDKNPS-----P-KEVAEAKFKEIAEAYEV 56 (306)
T ss_pred hCccccccHHHHHHHHHHHHHhhCCCCCCC-----c-hhhHHHHHhhhhccccc
Confidence 345555566699999999999999999653 2 44577799999999884
No 60
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=96.35 E-value=0.0037 Score=69.92 Aligned_cols=83 Identities=17% Similarity=0.110 Sum_probs=60.0
Q ss_pred HHHhhcC--CCCcHHHHHhcCccccCCCCCccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHH
Q 004773 639 IRKWSNG--KEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIF 716 (731)
Q Consensus 639 I~~Wa~G--KE~NIRALLSSLh~VLW~~s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~e 716 (731)
|-.|.-= ---|||. |.-+-.=+|+ -+.=+|++.-....+||++||++..+.||||++. ...+.+-.-+..+.+
T Consensus 74 ivgWl~i~~L~~~I~~-~k~~~~~~fD--PyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~--mvn~~rse~Ee~y~~ 148 (610)
T COG5407 74 IVGWLVISYLISNIRT-LKIEYRRGFD--PYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPP--MVNELRSEYEEKYKT 148 (610)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHcCCC--hHHhhcccCCCcHHHHHHHHHhheeecChhhcCC--CChhHHHHHHHHHHH
Confidence 5677630 0123444 3333344553 2455788999999999999999999999999985 445666778899999
Q ss_pred HHHHHhhhhc
Q 004773 717 CRRHGLISTH 726 (731)
Q Consensus 717 LNEAYEVf~~ 726 (731)
+++||+..|.
T Consensus 149 ItkAY~~lTd 158 (610)
T COG5407 149 ITKAYGLLTD 158 (610)
T ss_pred HHHHHHhhhh
Confidence 9999998764
No 61
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=96.18 E-value=0.0049 Score=65.30 Aligned_cols=31 Identities=19% Similarity=0.330 Sum_probs=27.9
Q ss_pred cccccccccCchhHHHHHHHHHhhcCCCccC
Q 004773 668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQ 698 (731)
Q Consensus 668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~ 698 (731)
+-++|..-++.++||+|||++++++||||++
T Consensus 4 ~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~ 34 (354)
T TIGR02349 4 EILGVSKDASEEEIKKAYRKLAKKYHPDRNK 34 (354)
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
Confidence 4567888899999999999999999999986
No 62
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=95.83 E-value=0.0088 Score=72.08 Aligned_cols=39 Identities=18% Similarity=0.257 Sum_probs=34.5
Q ss_pred CchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 677 EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 677 tPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
.+++||++|+|++.++||||++. ....|..+|+|||...
T Consensus 1298 ~~~KirrqY~kLA~kYHPDKNPE----------GRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1298 KPAKIRRQYYKLAAKYHPDKNPE----------GREMFERVNKAYELLS 1336 (2235)
T ss_pred cHHHHHHHHHHHHHHhCCCCCch----------HHHHHHHHHHHHHHHH
Confidence 35899999999999999999983 4689999999999865
No 63
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=95.42 E-value=0.028 Score=55.48 Aligned_cols=50 Identities=16% Similarity=0.187 Sum_probs=42.4
Q ss_pred ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 675 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 675 LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
-+++.++++.|+.+-..+||||..+. +..++.+|...=..||+||.|...
T Consensus 15 ~iD~~~L~~~y~~Lq~~~HPD~f~~~--~~~eq~~a~~~ss~iN~AY~tLkd 64 (173)
T PRK01773 15 QLDNALLSERYLALQKSLHPDNFANS--SAQEQRLAMQKSAEVNDALQILKD 64 (173)
T ss_pred CCCHHHHHHHHHHHHHHhCcCcccCC--CHHHHHHHHHHHHHHHHHHHHHCC
Confidence 47889999999999999999999764 355556788888999999999764
No 64
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=95.40 E-value=0.0097 Score=62.92 Aligned_cols=50 Identities=12% Similarity=0.224 Sum_probs=42.6
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIS 724 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf 724 (731)
..-+|++.-+...+|+||||++++.+|||+++.. | ++..|..+..||++.
T Consensus 36 YdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~----e----~k~~F~~iAtayeil 85 (329)
T KOG0722|consen 36 YDVLGVAREANKSEIAKAYRQLARRHHPDRNRDP----E----SKKLFVKIATAYEIL 85 (329)
T ss_pred HHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCc----h----hhhhhhhhhcccccc
Confidence 4556888888899999999999999999999853 2 448899999999875
No 65
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=94.94 E-value=0.029 Score=61.76 Aligned_cols=55 Identities=20% Similarity=0.234 Sum_probs=49.5
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
+|=+|+-.-+.-.+|-|||||++.++|||--+. .|.|-.|++.|+-|..|.||.+
T Consensus 397 YKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqd----EeEKKkAEKKFIDIAAAKEVLs 451 (504)
T KOG0624|consen 397 YKILGVKRNASKQEITKAYRKLAQKWHPDNFQD----EEEKKKAEKKFIDIAAAKEVLS 451 (504)
T ss_pred HHHhhhcccccHHHHHHHHHHHHHhcCCccccC----HHHHHHHHHhhhhHHHHHHhhc
Confidence 677889999999999999999999999999863 5667899999999999999976
No 66
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=91.81 E-value=0.27 Score=46.40 Aligned_cols=45 Identities=18% Similarity=0.339 Sum_probs=37.2
Q ss_pred cccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 670 VPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 670 VgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
+++..-++.++||.|.||+.+.-|||+-.+ .|||.+ +|||+++..
T Consensus 62 L~v~~s~~k~KikeaHrriM~~NHPD~GGS-------PYlAsK----INEAKdlLe 106 (112)
T KOG0723|consen 62 LGVTPSLDKDKIKEAHRRIMLANHPDRGGS-------PYLASK----INEAKDLLE 106 (112)
T ss_pred hCCCccccHHHHHHHHHHHHHcCCCcCCCC-------HHHHHH----HHHHHHHHh
Confidence 467788899999999999999999999753 377764 699998764
No 67
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=89.59 E-value=0.43 Score=51.38 Aligned_cols=47 Identities=13% Similarity=0.164 Sum_probs=38.7
Q ss_pred cCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhcc
Q 004773 676 IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHL 727 (731)
Q Consensus 676 vtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~~ 727 (731)
++|.||+++.+|-++++||||... +++. -|...|..|+.||+|.+.-
T Consensus 58 a~~~qi~kah~kkv~kyHPDk~aa-~g~~----~~d~fFk~iqkA~evL~D~ 104 (379)
T COG5269 58 AIPPQILKAHKKKVYKYHPDKTAA-GGNK----GCDEFFKLIQKAREVLGDR 104 (379)
T ss_pred CCcHHHHHHHHHHHHHhCccchhc-cCCC----CcHHHHHHHHHHHHHhccH
Confidence 578899999999999999999843 3333 2678999999999998754
No 68
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=89.46 E-value=0.35 Score=47.16 Aligned_cols=56 Identities=23% Similarity=0.167 Sum_probs=45.9
Q ss_pred cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhh
Q 004773 668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLI 723 (731)
Q Consensus 668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEV 723 (731)
+-.++..-.+...||++|++++-..|||++...+..++--.+++..+..|++||+.
T Consensus 117 ~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~ 172 (174)
T COG1076 117 KVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYED 172 (174)
T ss_pred HHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHh
Confidence 44455556677899999999999999999988765555555799999999999974
No 69
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=64.48 E-value=11 Score=40.36 Aligned_cols=52 Identities=12% Similarity=0.183 Sum_probs=40.5
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHh-hhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGL-ISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYE-Vf~~ 726 (731)
+.-+++.+-++.+.|+-+|.+++..+|||-.... + ..+-|..+-+||. |..|
T Consensus 50 fril~v~e~~~adevr~af~~lakq~hpdsgs~~-a-------daa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 50 FRILGVEEGADADEVREAFHDLAKQVHPDSGSEE-A-------DAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHhcccccCchhHHHHHHHHHHHHcCCCCCCcc-c-------cHHHHHHHHHHHHHHHHH
Confidence 4556889999999999999999999999987542 1 2356888888886 4443
No 70
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=49.43 E-value=35 Score=32.12 Aligned_cols=47 Identities=13% Similarity=0.169 Sum_probs=36.1
Q ss_pred cCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 676 IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 676 vtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
..-.+++.|.|+..++||||-..+ .++++.+=+.-+..||.-.+...
T Consensus 6 ~~~~~l~~aLr~Fy~~VHPDlF~~---~P~~k~~Ne~SLk~Ln~~Ld~l~ 52 (112)
T PF14687_consen 6 LSSPDLRSALRPFYFAVHPDLFGQ---HPEEKQVNEESLKLLNSYLDSLK 52 (112)
T ss_pred hhhHHHHHHHHHHHHHhCCccccc---ChHHHHhhHHHHHHHHHHHHHHh
Confidence 445789999999999999998875 35677777777888887655443
No 71
>PF05348 UMP1: Proteasome maturation factor UMP1; InterPro: IPR008012 UMP1 is a short-lived chaperone present in the precursor form of the 20S proteasome and absent in the mature complex. UMP1 is required for the correct assembly and enzymatic activation of the proteasome. UMP1 seems to be degraded by the proteasome upon its formation.
Probab=36.49 E-value=14 Score=35.47 Aligned_cols=16 Identities=44% Similarity=0.983 Sum_probs=14.4
Q ss_pred CCCCCCCccccccCCC
Q 004773 34 AGGNSDIDFDDVFGGP 49 (731)
Q Consensus 34 ~~~~sdvDF~DVFGGP 49 (731)
-|+..+|||.|||++|
T Consensus 95 ~G~d~~i~~eD~l~~p 110 (130)
T PF05348_consen 95 TGRDETIDFEDYLNGP 110 (130)
T ss_pred cCCcccccHHHhcCCc
Confidence 4788999999999987
No 72
>PF08628 Nexin_C: Sorting nexin C terminal; InterPro: IPR013937 This region is found at the C terminus of proteins belonging to the nexin family. It is found on proteins which also contain IPR001683 from INTERPRO.
Probab=30.03 E-value=56 Score=29.65 Aligned_cols=71 Identities=18% Similarity=0.292 Sum_probs=43.5
Q ss_pred CCcHHHHHhcCccccCCCCCccccccccccCch---hHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHH
Q 004773 647 EGNIRSLLSTLQYILWPASGWKPVPLVDIIEGN---AVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRR 719 (731)
Q Consensus 647 E~NIRALLSSLh~VLW~~s~WKpVgmsDLvtPa---qVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNE 719 (731)
+.++=.+|..|++.|||+-.|.+.... -++. .-+..=+..++..-||-+..-=+...-+.-+..||..|+.
T Consensus 37 e~~v~~~i~~l~~~lwP~g~~~~~~~~--Rt~~ek~~tr~~A~~~L~~~~P~~l~~vvG~~~~~~g~~~if~~LQ~ 110 (113)
T PF08628_consen 37 EEQVARYIQLLRESLWPNGKLAEPPPP--RTEEEKLRTRQEARELLLSLLPDTLKKVVGSENSRRGARRIFEMLQN 110 (113)
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHhcHHHHHHccCHHHHHHHHHHHHHHHCC
Confidence 457888999999999998766554431 1222 2222223444677788776522222334467788888764
No 73
>PRK13798 putative OHCU decarboxylase; Provisional
Probab=25.38 E-value=85 Score=31.28 Aligned_cols=66 Identities=17% Similarity=0.013 Sum_probs=43.8
Q ss_pred HHhhcCCCCcHHHHHhcCccccCCCCCccccccccccCchhHHHHHHHHHhhcCCCccCC---CCCChhhHHH------H
Q 004773 640 RKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQ---KGATCQQTYI------A 710 (731)
Q Consensus 640 ~~Wa~GKE~NIRALLSSLh~VLW~~s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q---~~at~EQk~I------A 710 (731)
..|..-.-.++-+|+..+..++.. ..|.. +-+++..|||=... .+...||.-+ -
T Consensus 35 ~~~~~RPf~s~~~L~~a~~~~~~~-~~~~~----------------~~~~l~~HP~lg~~~~~~~S~~EQ~gl~~l~~~~ 97 (166)
T PRK13798 35 RLAAARPFADHDALLAAADEALAG-LSEAD----------------IDEALAGHPRIGERPASKASAREQAGVADADEAV 97 (166)
T ss_pred HHHHcCCCCCHHHHHHHHHHHHHc-CCHHH----------------HHHHHHhCCcccCccccccCHHHhcccccCCHHH
Confidence 345555567999999999999873 33432 56789999965432 1223455432 2
Q ss_pred HHHHHHHHHHHh
Q 004773 711 EKVLIFCRRHGL 722 (731)
Q Consensus 711 e~VF~eLNEAYE 722 (731)
...|..||.||+
T Consensus 98 ~~~l~~lN~~Y~ 109 (166)
T PRK13798 98 MAALAAGNRAYE 109 (166)
T ss_pred HHHHHHHHHHHH
Confidence 346899999997
No 74
>PF08081 RBM1CTR: RBM1CTR (NUC064) family; InterPro: IPR012604 This region is found in RBM1-like RNA binding hnRNPs [].
Probab=24.19 E-value=48 Score=27.49 Aligned_cols=20 Identities=50% Similarity=0.978 Sum_probs=14.9
Q ss_pred ccccCCCCCccCcccccccC
Q 004773 43 DDVFGGPPRRSSMHETRCSY 62 (731)
Q Consensus 43 ~DVFGGPPRr~s~~~~r~Sf 62 (731)
-|.+||||||-+.--+|.-+
T Consensus 15 Rd~YggPPrRe~~~srRd~y 34 (45)
T PF08081_consen 15 RDNYGGPPRREPMPSRRDDY 34 (45)
T ss_pred cccCCCCCCCCCCCcccccc
Confidence 47899999998776555443
Done!