Query 004773
Match_columns 731
No_of_seqs 166 out of 265
Neff 2.9
Searched_HMMs 29240
Date Mon Mar 25 05:20:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004773.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004773hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qwo_B Putative tyrosine-prote 99.9 2.4E-26 8.1E-31 200.9 6.3 89 633-725 1-90 (92)
2 3ag7_A Putative uncharacterize 99.9 3E-24 1E-28 190.5 8.1 99 628-726 4-102 (106)
3 1n4c_A Auxilin; four helix bun 99.8 8E-22 2.7E-26 190.4 4.8 107 615-726 68-175 (182)
4 2ys8_A RAB-related GTP-binding 98.7 1E-08 3.5E-13 87.6 4.0 52 667-726 30-81 (90)
5 1wjz_A 1700030A21RIK protein; 98.6 2E-08 7E-13 85.1 5.1 59 667-726 19-77 (94)
6 1iur_A KIAA0730 protein; DNAJ 98.6 4.9E-08 1.7E-12 84.2 5.0 53 668-726 20-72 (88)
7 2dn9_A DNAJ homolog subfamily 98.5 6.5E-08 2.2E-12 79.8 5.0 53 667-726 10-62 (79)
8 1hdj_A Human HSP40, HDJ-1; mol 98.5 7.1E-08 2.4E-12 79.4 5.1 52 667-726 6-57 (77)
9 2yua_A Williams-beuren syndrom 98.5 7.9E-08 2.7E-12 83.2 5.4 53 667-726 20-72 (99)
10 2cug_A Mkiaa0962 protein; DNAJ 98.5 8.3E-08 2.8E-12 81.3 5.3 52 667-726 20-71 (88)
11 2ej7_A HCG3 gene; HCG3 protein 98.5 1.2E-07 4E-12 78.8 5.4 54 667-726 12-65 (82)
12 2dmx_A DNAJ homolog subfamily 98.5 1.4E-07 4.6E-12 80.3 5.8 54 667-726 12-65 (92)
13 2ctr_A DNAJ homolog subfamily 98.5 9.2E-08 3.1E-12 81.0 4.1 52 667-726 10-61 (88)
14 2ctp_A DNAJ homolog subfamily 98.4 1E-07 3.5E-12 78.7 3.9 52 667-726 10-61 (78)
15 2ctw_A DNAJ homolog subfamily 98.4 1.5E-07 5.3E-12 82.9 4.8 53 667-726 20-72 (109)
16 2ctq_A DNAJ homolog subfamily 98.4 1.9E-07 6.6E-12 82.5 5.1 52 667-725 23-74 (112)
17 2qsa_A DNAJ homolog DNJ-2; J-d 98.4 3.2E-07 1.1E-11 80.3 5.8 56 667-726 18-74 (109)
18 1bq0_A DNAJ, HSP40; chaperone, 98.4 1.6E-07 5.6E-12 81.5 3.3 53 667-726 6-58 (103)
19 2lgw_A DNAJ homolog subfamily 98.4 4.6E-07 1.6E-11 79.1 6.0 53 668-726 6-58 (99)
20 2l6l_A DNAJ homolog subfamily 98.3 5.4E-07 1.8E-11 83.1 6.4 58 667-725 13-70 (155)
21 2och_A Hypothetical protein DN 98.3 3.3E-07 1.1E-11 74.9 4.3 50 667-726 11-60 (73)
22 1faf_A Large T antigen; J doma 98.3 3.1E-07 1.1E-11 77.2 4.1 47 669-726 16-64 (79)
23 2o37_A Protein SIS1; HSP40, J- 98.3 4.7E-07 1.6E-11 77.4 4.2 50 667-726 11-60 (92)
24 2guz_A Mitochondrial import in 98.2 9.1E-07 3.1E-11 72.8 4.2 47 668-725 18-65 (71)
25 1fpo_A HSC20, chaperone protei 98.2 1.5E-06 5E-11 82.5 6.1 54 671-726 8-63 (171)
26 3apq_A DNAJ homolog subfamily 98.2 1.1E-06 3.7E-11 81.8 4.7 50 669-725 7-56 (210)
27 3hho_A CO-chaperone protein HS 98.1 2.1E-06 7.2E-11 81.6 6.0 55 670-726 10-66 (174)
28 1gh6_A Large T antigen; tumor 98.1 9.9E-07 3.4E-11 79.4 2.6 46 670-726 14-61 (114)
29 3bvo_A CO-chaperone protein HS 98.1 3.4E-06 1.1E-10 82.6 6.0 83 641-725 13-104 (207)
30 3lz8_A Putative chaperone DNAJ 97.8 2.2E-06 7.5E-11 88.8 0.0 52 667-726 31-82 (329)
31 3uo3_A J-type CO-chaperone JAC 97.7 7.2E-06 2.5E-10 78.8 1.6 42 675-726 29-70 (181)
32 2pf4_E Small T antigen; PP2A, 97.6 2.1E-05 7.1E-10 75.9 3.0 47 669-726 16-64 (174)
33 3apo_A DNAJ homolog subfamily 97.2 5.3E-05 1.8E-09 83.3 -0.1 53 667-726 24-76 (780)
34 2y4t_A DNAJ homolog subfamily 96.7 0.0018 6.2E-08 62.8 6.1 56 667-726 385-440 (450)
35 2guz_B Mitochondrial import in 96.6 0.002 6.9E-08 53.3 4.9 45 670-725 10-57 (65)
No 1
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.92 E-value=2.4e-26 Score=200.89 Aligned_cols=89 Identities=33% Similarity=0.571 Sum_probs=82.8
Q ss_pred hHHHHHHHHhhcCCCCcHHHHHhcCccccCCC-CCccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHH
Q 004773 633 QAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAE 711 (731)
Q Consensus 633 d~Id~KI~~Wa~GKE~NIRALLSSLh~VLW~~-s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe 711 (731)
|.|++||+.|++||++|||+||+|||.|||++ +.|+.+||...+++.+||+||||+++++||||++.. +++++|+
T Consensus 1 ~~i~~~i~~W~~gk~~~ir~lL~~l~~~L~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~----~~~~~A~ 76 (92)
T 2qwo_B 1 DPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQ----PYEQYAK 76 (92)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHGGGTSCTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTS----TTHHHHH
T ss_pred ChHHHHHHHHHccChhHHHHHHHHHHHHhcccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc----hhHhHHH
Confidence 57999999999999999999999999999995 999999999999999999999999999999999742 3446899
Q ss_pred HHHHHHHHHHhhhh
Q 004773 712 KVLIFCRRHGLIST 725 (731)
Q Consensus 712 ~VF~eLNEAYEVf~ 725 (731)
.+|.+|++||+|+.
T Consensus 77 ~~F~~i~eAyevL~ 90 (92)
T 2qwo_B 77 MIFMELNDAWSEFE 90 (92)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999985
No 2
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.90 E-value=3e-24 Score=190.52 Aligned_cols=99 Identities=64% Similarity=1.023 Sum_probs=93.3
Q ss_pred CchhHhHHHHHHHHhhcCCCCcHHHHHhcCccccCCCCCccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhH
Q 004773 628 DPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQT 707 (731)
Q Consensus 628 ~~~~~d~Id~KI~~Wa~GKE~NIRALLSSLh~VLW~~s~WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk 707 (731)
-+++++.|+.+|+.|++||++|||+||++|+.+||++..|-.|.+.+.+++.+||+||||+++++||||++..+++.+++
T Consensus 4 ~~~~~~~~~~~i~~W~~~~~~~ir~lL~~l~~~l~~~~d~Y~vl~~~~As~~eIKkAYRklal~~HPDK~~~~~~~~e~~ 83 (106)
T 3ag7_A 4 GSEEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQK 83 (106)
T ss_dssp CHHHHHHHHHHHHHHHTTTTTCHHHHHTTGGGTSCTTSCCCCCCGGGSCSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHH
T ss_pred hHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcccCCHHHHcCCCCCCHHHHHHHHHHHHHHHCcCcCCCcccchhhH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999998766678999
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 004773 708 YIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 708 ~IAe~VF~eLNEAYEVf~~ 726 (731)
++|+..|..|++||+|+..
T Consensus 84 ~~A~~~F~~I~~AYevLsd 102 (106)
T 3ag7_A 84 YMAEKVFELLQEAWDHFNT 102 (106)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999864
No 3
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.84 E-value=8e-22 Score=190.38 Aligned_cols=107 Identities=31% Similarity=0.539 Sum_probs=91.2
Q ss_pred hhhhhHHHHhcCCCchhHhHHHHHHHHhhcCCCCcHHHHHhcCccccCC-CCCccccccccccCchhHHHHHHHHHhhcC
Q 004773 615 VTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWP-ASGWKPVPLVDIIEGNAVKRSYQKALLCLH 693 (731)
Q Consensus 615 l~q~~nk~~~~~~~~~~~d~Id~KI~~Wa~GKE~NIRALLSSLh~VLW~-~s~WKpVgmsDLvtPaqVKKAYRKAiLkvH 693 (731)
.+++.++++++++ .+.+|.|+.+|..|+.|+++|||+||++|++|||+ ..-|+-++|...++..+||+||||+++++|
T Consensus 68 ~~~~~~~~r~~~~-a~~~D~l~~~i~~W~~gk~~niRaLLssl~~vl~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~H 146 (182)
T 1n4c_A 68 GPRTIAEMRKEEM-AKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVH 146 (182)
T ss_dssp CCCCTHHHHHHHH-HTCCCTTTHHHHHHHHHHTTCHHHHHHHGGGGSCTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTC
T ss_pred CcchHHHHHHHHH-HHhccHHHHHHHHHHcccHHHHHHHHHHHHHHhcCccchhhcCCCCCCCCHHHHHHHHHHHHHHHC
Confidence 3445555555444 34567888899999999999999999999999998 478999999999999999999999999999
Q ss_pred CCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 694 PDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 694 PDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|||++.. ..+ ++|+.+|..|++||+|+..
T Consensus 147 PDK~~~~--~~e--~~A~~~F~~I~eAYevLsD 175 (182)
T 1n4c_A 147 PDKATGQ--PYE--QYAKMIFMELNDAWSEFEN 175 (182)
T ss_dssp GGGGSSC--TTH--HHHHHHHHHHHHHHHHHHH
T ss_pred cCcCCCc--chH--HHHHHHHHHHHHHHHHHCC
Confidence 9999742 223 4899999999999999864
No 4
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.67 E-value=1e-08 Score=87.64 Aligned_cols=52 Identities=21% Similarity=0.317 Sum_probs=45.1
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+-++|..-++..+||+|||++++.+||||++..+ |+..|..|++||+|...
T Consensus 30 y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~--------~~~~f~~i~~Ay~~L~d 81 (90)
T 2ys8_A 30 WDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPG--------SEDAFKAVVNARTALLK 81 (90)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTT--------HHHHHHHHHHHHHHHHH
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcc--------HHHHHHHHHHHHHHHCC
Confidence 56668888899999999999999999999997532 66789999999999865
No 5
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=98.65 E-value=2e-08 Score=85.10 Aligned_cols=59 Identities=19% Similarity=0.149 Sum_probs=50.6
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|.-++|..-++..+||+|||++++.+||||++. ..+.+.+..|+..|..|++||+|...
T Consensus 19 y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~-~~~~~~~~~~~~~f~~i~~Ay~~L~d 77 (94)
T 1wjz_A 19 YSILGADPSANMSDLKQKYQKLILLYHPDKQSA-DVPAGTMEECMQKFIEIDQAWKILGN 77 (94)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCT-TCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-CCChhhhHHHHHHHHHHHHHHHHHCC
Confidence 567788888999999999999999999999974 33456667899999999999999753
No 6
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=98.56 E-value=4.9e-08 Score=84.20 Aligned_cols=53 Identities=19% Similarity=0.117 Sum_probs=44.0
Q ss_pred cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
+=+++..-++..+||+|||++++.+||||++.. ...|+..|..|++||+|...
T Consensus 20 ~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~------~~~a~~~F~~I~~AYevL~~ 72 (88)
T 1iur_A 20 SVVEQAWKLPESERKKIIRRLYLKWHPDKNPEN------HDIANEVFKHLQNEINRLEK 72 (88)
T ss_dssp HHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSC------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc------hHHHHHHHHHHHHHHHHHHh
Confidence 345667778999999999999999999998631 13588999999999999764
No 7
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.54 E-value=6.5e-08 Score=79.83 Aligned_cols=53 Identities=11% Similarity=0.119 Sum_probs=45.0
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|.-++|..-++..+||++||++++.+||||++... .|+..|..|++||+|...
T Consensus 10 y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~-------~a~~~f~~i~~Ay~~L~d 62 (79)
T 2dn9_A 10 YQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDP-------KAKEKFSQLAEAYEVLSD 62 (79)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCT-------THHHHHHHHHHHHHHHHS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCH-------HHHHHHHHHHHHHHHHCC
Confidence 45567888899999999999999999999987422 378899999999999753
No 8
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=98.53 E-value=7.1e-08 Score=79.41 Aligned_cols=52 Identities=21% Similarity=0.264 Sum_probs=44.5
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|.-++|..-++..+||++|+++++.+||||++.. .|+..|..|++||+|...
T Consensus 6 y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~--------~~~~~f~~i~~Ay~~L~d 57 (77)
T 1hdj_A 6 YQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP--------GAEEKFKEIAEAYDVLSD 57 (77)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT--------THHHHHHHHHHHHHHTTC
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHHCC
Confidence 4556788889999999999999999999998742 277899999999999753
No 9
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.52 E-value=7.9e-08 Score=83.18 Aligned_cols=53 Identities=11% Similarity=0.167 Sum_probs=45.3
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+-++|..-++..+||+|||++++.+||||+.... .|+..|..|++||+|...
T Consensus 20 Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-------~a~~~f~~i~~Ay~~L~d 72 (99)
T 2yua_A 20 YDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSA-------EAAERFTRISQAYVVLGS 72 (99)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCS-------HHHHHHHHHHHHHHHTTS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCH-------HHHHHHHHHHHHHHHHCC
Confidence 46678888899999999999999999999987421 378899999999999753
No 10
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=98.52 E-value=8.3e-08 Score=81.30 Aligned_cols=52 Identities=21% Similarity=0.254 Sum_probs=45.5
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+-++|..-++..+||++||++++.+||||++.. .|+..|..|++||+|...
T Consensus 20 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--------~~~~~f~~i~~Ay~~L~d 71 (88)
T 2cug_A 20 YRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP--------GAEDRFIQISKAYEILSN 71 (88)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST--------THHHHHHHHHHHHHHHHS
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh--------hHHHHHHHHHHHHHHHCC
Confidence 5677888889999999999999999999998742 277899999999999763
No 11
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.49 E-value=1.2e-07 Score=78.80 Aligned_cols=54 Identities=20% Similarity=0.254 Sum_probs=45.5
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+-++|..-++..+||++||++++.+||||++.. ...|+..|..|++||+|...
T Consensus 12 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~------~~~a~~~f~~i~~Ay~~L~d 65 (82)
T 2ej7_A 12 YEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEN------KEEAERRFKQVAEAYEVLSD 65 (82)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTT------HHHHHHHHHHHHHHHHHHSS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------HHHHHHHHHHHHHHHHHHCC
Confidence 4556788889999999999999999999998631 23688999999999999764
No 12
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.48 E-value=1.4e-07 Score=80.27 Aligned_cols=54 Identities=20% Similarity=0.256 Sum_probs=45.4
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+-++|..-++..+||++||++++.+||||++.. ...|+..|..|++||+|...
T Consensus 12 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~------~~~a~~~f~~i~~Ay~~L~d 65 (92)
T 2dmx_A 12 YEVLGVQASASPEDIKKAYRKLALRWHPDKNPDN------KEEAEKKFKLVSEAYEVLSD 65 (92)
T ss_dssp HHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSC------SHHHHHHHHHHHHHHHHHHS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCcc------HHHHHHHHHHHHHHHHHHCC
Confidence 4556777888999999999999999999998642 13688999999999999753
No 13
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.46 E-value=9.2e-08 Score=81.03 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=44.3
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+-++|..-++..+||++||++++.+||||++. ..|+..|..|++||+|...
T Consensus 10 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--------~~a~~~f~~i~~Ay~~L~d 61 (88)
T 2ctr_A 10 YDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--------PDAEAKFREIAEAYETLSD 61 (88)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS--------HHHHHHHHHHHHHHHHHHS
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--------hHHHHHHHHHHHHHHHHCC
Confidence 455677778999999999999999999999863 1478999999999999764
No 14
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.45 E-value=1e-07 Score=78.66 Aligned_cols=52 Identities=15% Similarity=0.204 Sum_probs=43.9
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|.-++|..-++..+||++|+++++.+||||+... .|+..|..|++||+|...
T Consensus 10 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--------~~~~~f~~i~~Ay~~L~d 61 (78)
T 2ctp_A 10 YEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP--------GATEAFKAIGTAYAVLSN 61 (78)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH--------HHHHHHHHHHHHHHHHTS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHHCC
Confidence 4456777778999999999999999999998631 378899999999999754
No 15
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.43 E-value=1.5e-07 Score=82.91 Aligned_cols=53 Identities=25% Similarity=0.241 Sum_probs=45.4
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+-++|..-++..+||++||++++.+||||++.. . .|+..|..|++||+|...
T Consensus 20 Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~---~----~a~~~f~~i~~Ay~vL~d 72 (109)
T 2ctw_A 20 YHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN---P----EAADKFKEINNAHAILTD 72 (109)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC---H----HHHHHHHHHHHHHHHHTC
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc---H----HHHHHHHHHHHHHHHHcC
Confidence 5667888889999999999999999999998742 1 378999999999999753
No 16
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.41 E-value=1.9e-07 Score=82.49 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=45.3
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
++-++|..-++..+||+|||++++.+||||++... .|+..|..|++||+|..
T Consensus 23 Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-------~a~~~f~~i~~Ay~vL~ 74 (112)
T 2ctq_A 23 YTLLGCDELSSVEQILAEFKVRALECHPDKHPENP-------KAVETFQKLQKAKEILT 74 (112)
T ss_dssp HHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCS-------THHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcH-------HHHHHHHHHHHHHHHHC
Confidence 46678888999999999999999999999997422 27899999999999975
No 17
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=98.38 E-value=3.2e-07 Score=80.32 Aligned_cols=56 Identities=11% Similarity=0.159 Sum_probs=48.2
Q ss_pred cccccccccc-CchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDII-EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLv-tPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
+.-+||..-+ +..+||+|||++++.+||||++. .+.+..|+..|..|++||+|...
T Consensus 18 y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~----~~~~~~a~~~f~~i~~AY~~L~d 74 (109)
T 2qsa_A 18 YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKN----KEEKLLAEERFRVIATAYETLKD 74 (109)
T ss_dssp HHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCS----HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----ccccHHHHHHHHHHHHHHHHHCC
Confidence 5677888878 99999999999999999999864 34556799999999999999753
No 18
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=98.36 E-value=1.6e-07 Score=81.54 Aligned_cols=53 Identities=17% Similarity=0.251 Sum_probs=44.7
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+-++|..-++..+||++||++++.+||||++... .|+..|..|++||+|...
T Consensus 6 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-------~a~~~f~~i~~Ay~~L~d 58 (103)
T 1bq0_A 6 YEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK-------EAEAKFKEIKEAYEVLTD 58 (103)
T ss_dssp TTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTC-------THHHHHHHHTTTTTSTTC
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcH-------HHHHHHHHHHHHHHHHCC
Confidence 45567788899999999999999999999987422 377899999999998753
No 19
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=98.35 E-value=4.6e-07 Score=79.06 Aligned_cols=53 Identities=19% Similarity=0.239 Sum_probs=44.6
Q ss_pred cccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 668 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 668 KpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
+-++|..-++..+||++||++++.+||||++.. +..|+..|..|++||+|...
T Consensus 6 ~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~------~~~a~~~f~~I~~AY~vL~d 58 (99)
T 2lgw_A 6 EILDVPRSASADDIKKAYRRKALQWHPDKNPDN------KEFAEKKFKEVAEAYEVLSD 58 (99)
T ss_dssp HHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSC------CHHHHHHHHHHHHHHHHHHS
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCcc------HHHHHHHHHHHHHHHHHHCC
Confidence 446777788999999999999999999998642 23688999999999999753
No 20
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=98.34 E-value=5.4e-07 Score=83.10 Aligned_cols=58 Identities=19% Similarity=0.131 Sum_probs=48.3
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
+.=+||..-++..+||+|||++++.+||||..... ..+.+..|...|..|++||+|..
T Consensus 13 y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~-~~~~~~~a~~~f~~i~~Ay~~L~ 70 (155)
T 2l6l_A 13 YSILGADPSANISDLKQKYQKLILMYHPDKQSTDV-PAGTVEECVQKFIEIDQAWKILG 70 (155)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCC-TTHHHHHHHHHHHHHHHHHHHSS
T ss_pred hHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCC-chhHHHHHHHHHHHHHHHHHHcC
Confidence 34457777888999999999999999999998632 34556689999999999999975
No 21
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=98.33 E-value=3.3e-07 Score=74.90 Aligned_cols=50 Identities=18% Similarity=0.246 Sum_probs=42.8
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+-+||..-++..+||++|+++++.+||||++. +...|..|++||+|...
T Consensus 11 y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~----------~~~~f~~i~~Ay~~L~d 60 (73)
T 2och_A 11 YDVLGVKPDASDNELKKAYRKMALKFHPDKNPD----------GAEQFKQISQAYEVLSD 60 (73)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT----------CHHHHHHHHHHHHHHTS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC----------HHHHHHHHHHHHHHHCC
Confidence 456788888999999999999999999999863 13689999999999753
No 22
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=98.32 E-value=3.1e-07 Score=77.21 Aligned_cols=47 Identities=17% Similarity=0.089 Sum_probs=39.2
Q ss_pred ccccccc--cCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 669 PVPLVDI--IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 669 pVgmsDL--vtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
-+||..- ++..+||+|||++++.+||||... ...|..||+||+|...
T Consensus 16 iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----------~~~f~~i~~AYe~L~~ 64 (79)
T 1faf_A 16 LLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----------HALMQELNSLWGTFKT 64 (79)
T ss_dssp HHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----------HHHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----------HHHHHHHHHHHHHHhh
Confidence 3466666 889999999999999999999641 3579999999999764
No 23
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=98.28 E-value=4.7e-07 Score=77.41 Aligned_cols=50 Identities=20% Similarity=0.208 Sum_probs=42.0
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+-++|..-++..+||++||++++.+||||++.. ...|..|++||+|...
T Consensus 11 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----------~~~f~~i~~Ay~~L~d 60 (92)
T 2o37_A 11 YDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD----------TEKFKEISEAFEILND 60 (92)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC----------HHHHHHHHHHHHHHTS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh----------HHHHHHHHHHHHHHCC
Confidence 4556777789999999999999999999998641 2489999999999764
No 24
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.20 E-value=9.1e-07 Score=72.80 Aligned_cols=47 Identities=17% Similarity=0.153 Sum_probs=38.7
Q ss_pred ccccccc-ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 668 KPVPLVD-IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 668 KpVgmsD-LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
+=+||.. -++..+||++||++++.+||||.. + ...|..||+||++..
T Consensus 18 ~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g----~-------~~~f~~i~~Aye~L~ 65 (71)
T 2guz_A 18 QILNLTENTLTKKKLKEVHRKIMLANHPDKGG----S-------PFLATKINEAKDFLE 65 (71)
T ss_dssp HHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC----C-------HHHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC----C-------HHHHHHHHHHHHHHh
Confidence 3456666 588999999999999999999952 1 248999999999975
No 25
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=98.20 E-value=1.5e-06 Score=82.55 Aligned_cols=54 Identities=17% Similarity=0.109 Sum_probs=44.5
Q ss_pred cccccc--CchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 671 PLVDII--EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 671 gmsDLv--tPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+..-+ +..+||++||++++.+||||++.. +...+..|...|..||+||+|...
T Consensus 8 gl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~--~~~e~~~a~~~f~~In~AY~vL~d 63 (171)
T 1fpo_A 8 GLPARYQLDTQALSLRFQDLQRQYHPDKFASG--SQAEQLAAVQQSATINQAWQTLRH 63 (171)
T ss_dssp TCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTS--CHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCC--CHHHHHHHHHHHHHHHHHHHHHcC
Confidence 455444 899999999999999999999853 344556899999999999999763
No 26
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.18 E-value=1.1e-06 Score=81.84 Aligned_cols=50 Identities=18% Similarity=0.220 Sum_probs=42.6
Q ss_pred ccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 669 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 669 pVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
=+|+..-++..+||+|||++++.+||||++... .|+..|..|++||+|..
T Consensus 7 ~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~-------~~~~~f~~i~~Ay~~L~ 56 (210)
T 3apq_A 7 LLGVSKTASSREIRQAFKKLALKLHPDKNPNNP-------NAHGDFLKINRAYEVLK 56 (210)
T ss_dssp HHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCT-------THHHHHHHHHHHHHHHT
T ss_pred HcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCh-------HHHHHHHHHHHHHHHhC
Confidence 356777789999999999999999999987432 27789999999999875
No 27
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=98.15 E-value=2.1e-06 Score=81.58 Aligned_cols=55 Identities=11% Similarity=0.111 Sum_probs=44.8
Q ss_pred ccccccc--CchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 670 VPLVDII--EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 670 VgmsDLv--tPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
+|+..-+ +..+||++||++++.+||||++.. ...++.+|...|..||+||+|...
T Consensus 10 Lgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~--~~~e~~~a~~~f~~In~AY~vL~d 66 (174)
T 3hho_A 10 FGLPIQFELDGSLLSSQFRALQKRFHPDNFATA--SERDRLMAVQQAAQINDAYQTLKD 66 (174)
T ss_dssp TTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTS--CHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--cHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3555544 489999999999999999998753 355667899999999999999754
No 28
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=98.10 E-value=9.9e-07 Score=79.39 Aligned_cols=46 Identities=20% Similarity=0.130 Sum_probs=39.0
Q ss_pred cccccccCc--hhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 670 VPLVDIIEG--NAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 670 VgmsDLvtP--aqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
+||..-++. .+||+|||++++.+||||++. +..|..|++||+|...
T Consensus 14 Lgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-----------~e~f~~I~~AYevL~d 61 (114)
T 1gh6_A 14 LGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----------EEKMKKMNTLYKKMED 61 (114)
T ss_dssp TTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----------TTTTHHHHHHHHHHHH
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-----------HHHHHHHHHHHHHHCC
Confidence 567777777 999999999999999999753 2579999999999753
No 29
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=98.08 E-value=3.4e-06 Score=82.57 Aligned_cols=83 Identities=14% Similarity=0.182 Sum_probs=58.0
Q ss_pred HhhcCCC---CcHHHHHhcCccccCC-CCC---ccccccccc--cCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHH
Q 004773 641 KWSNGKE---GNIRSLLSTLQYILWP-ASG---WKPVPLVDI--IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAE 711 (731)
Q Consensus 641 ~Wa~GKE---~NIRALLSSLh~VLW~-~s~---WKpVgmsDL--vtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe 711 (731)
=|..|.. -+...++|..-.++.+ ... +.=+||..- ++..+||++||++++.+||||++.. +...+..|.
T Consensus 13 Cw~C~~~~~~~~~~~~fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~--~~~e~~~a~ 90 (207)
T 3bvo_A 13 CWNCGGPWGPGREDRFFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQR--SQTEKDFSE 90 (207)
T ss_dssp CSSSCCBCCSSCSCCCBCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTS--CHHHHHHHH
T ss_pred CCCCCCCcccccccccccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--CHHHHHHHH
Confidence 3666654 3334455543333333 222 345667664 6889999999999999999999753 244556799
Q ss_pred HHHHHHHHHHhhhh
Q 004773 712 KVLIFCRRHGLIST 725 (731)
Q Consensus 712 ~VF~eLNEAYEVf~ 725 (731)
..|..||+||+|..
T Consensus 91 ~~f~~In~AY~vLs 104 (207)
T 3bvo_A 91 KHSTLVNDAYKTLL 104 (207)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC
Confidence 99999999999976
No 30
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=97.84 E-value=2.2e-06 Score=88.75 Aligned_cols=52 Identities=13% Similarity=0.093 Sum_probs=0.0
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
|+-++|..-++.++||+||||+++++||||++.. .|+..|.+|++||+|...
T Consensus 31 Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~--------~a~~~f~~i~~Ay~vL~d 82 (329)
T 3lz8_A 31 YAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN--------DAEAKFKDLAEAWEVLKD 82 (329)
T ss_dssp ------------------------------------------------------------
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh--------HHHHHHHHHHHHHHHhhh
Confidence 5667888899999999999999999999998642 377899999999998753
No 31
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=97.73 E-value=7.2e-06 Score=78.76 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=36.6
Q ss_pred ccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 675 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 675 LvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
-++..+||++||++++.+||||++. |...|..||+||+|...
T Consensus 29 ~a~~~eIk~aYr~la~~~HPDk~~~----------a~~~f~~i~~AY~vL~d 70 (181)
T 3uo3_A 29 TIDQSRLRKEYRQLQAQHHPDMAQQ----------GSEQSSTLNQAYHTLKD 70 (181)
T ss_dssp CCCHHHHHHHHHHHHHTCCTTSCCS----------CSSGGGSHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHhCcCCCcc----------HHHHHHHHHHHHHHHcC
Confidence 6788999999999999999999864 44679999999999753
No 32
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=97.62 E-value=2.1e-05 Score=75.91 Aligned_cols=47 Identities=17% Similarity=0.032 Sum_probs=35.9
Q ss_pred ccccccccC--chhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 669 PVPLVDIIE--GNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 669 pVgmsDLvt--PaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
-+|+..-++ ..+||+|||++++.+||||++. +..|..|++||+|...
T Consensus 16 vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~-----------~e~F~~I~~AYevLsd 64 (174)
T 2pf4_E 16 LLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----------EEKMKKMNTLYKKMED 64 (174)
T ss_dssp TTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C-----------CTTTTHHHHHHHHHHH
T ss_pred HcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC-----------HHHHHHHHHHHHHhCC
Confidence 346666666 5999999999999999999753 1479999999998753
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.19 E-value=5.3e-05 Score=83.33 Aligned_cols=53 Identities=17% Similarity=0.237 Sum_probs=26.3
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
+.=+|+..-++..+||+|||++++.+||||++... -|+..|..|++||+|...
T Consensus 24 y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~-------~~~~~f~~i~~ay~~L~~ 76 (780)
T 3apo_A 24 YSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNP-------NAHGDFLKINRAYEVLKD 76 (780)
T ss_dssp HHHHTCCTTCCHHHHHHHHCC------------------------------CTHHHHHHS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCh-------HHHHHHHHHHHHHHHHcC
Confidence 56678888999999999999999999999986422 377889999999998753
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=96.72 E-value=0.0018 Score=62.76 Aligned_cols=56 Identities=21% Similarity=0.260 Sum_probs=46.7
Q ss_pred ccccccccccCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhhc
Q 004773 667 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH 726 (731)
Q Consensus 667 WKpVgmsDLvtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~~ 726 (731)
++-+++..-.+..+++++|+++++..|||+.+. .+.+..|+..|..|++||++...
T Consensus 385 y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~----~~~~~~a~~~~~~i~~ay~~L~d 440 (450)
T 2y4t_A 385 YKILGVKRNAKKQEIIKAYRKLALQWHPDNFQN----EEEKKKAEKKFIDIAAAKEVLSD 440 (450)
T ss_dssp GGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCS----HHHHHHHHHHHHHHHHHHHHSSG
T ss_pred HHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCC----chHHHHHHHHHHHHHHHHHHhCC
Confidence 566677777788999999999999999999863 34466799999999999999753
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=96.63 E-value=0.002 Score=53.34 Aligned_cols=45 Identities=7% Similarity=0.052 Sum_probs=33.2
Q ss_pred cccccc---cCchhHHHHHHHHHhhcCCCccCCCCCChhhHHHHHHHHHHHHHHHhhhh
Q 004773 670 VPLVDI---IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 725 (731)
Q Consensus 670 VgmsDL---vtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~eLNEAYEVf~ 725 (731)
+||.+. ++..+||++||++....||||.. +. | ++..||+|+++..
T Consensus 10 Lgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG----S~---y----l~~ki~~Ake~l~ 57 (65)
T 2guz_B 10 LNIEESKGDLNMDKINNRFNYLFEVNDKEKGG----SF---Y----LQSKVYRAAERLK 57 (65)
T ss_dssp TTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC----CH---H----HHHHHHHHHHHHH
T ss_pred hCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC----CH---H----HHHHHHHHHHHHH
Confidence 456665 78899999999999999999953 21 3 4455667777653
Done!