Citrus Sinensis ID: 004775

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-
MKSLQTEVIEEGEVEPIRPLPWYPNNLAWHSNFSRMQLRKNQTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPLPVQEKHINPEEKMLPRNDDPPKKLQNQDTEEVNGMEVDLADGTDEKDPEGSLEANSIDNEDGAAVEPDPLTCEKVDSEETEVPVNTETKSERTGGKRKLQIQGKWKGIDPVIFFNDETIINSIKTFYGIDDSFQLSGQLVSRNGDTNRVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQTSREGNSAPCSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVIVLSKGGEALSNPIQIDASTIAIGCWKGRASLSVMVTAIDCQELLERLLMRLEIEKGDLVQENALGTDEVQEEMNDNGKEEPESLEVAVNT
ccccccHHcccccccccccccccccccEEEEcccHHHHcccHHHHHHHcccHHccccccCEEEcccccccccccccccccEEEEccccccccHHHHHHHHHcccccccccccEEEEEcccHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccHHHcccccccccHHHHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccccccHHHcHHHHHccccccccccccEEEEccccccccEEEEEcHHHHHHHHHccccccccEEEEEEEEEEEECcccccccccccEEEccccHHHHHccccccEEEEcHHHHHHHHHcccccccccccHHHHHHHHccccccEEEEEEccccccccccccccccEEEEEEEcccEEEEEccHHHHHHHHHHHHHHHHcccccccHHccccccHHHHHcccccccccccccccccc
*KSLQTEVIEEGEVEPIRPLPWYPNNLAWHSNFSRMQLRKNQTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSA***GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMF*****************************QVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVS********************************************************************************************************GKWKGIDPVIFFNDETIINSIKTFYGIDDSFQLSGQLVSRNGDTNRVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQTSREGNSAPCSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVIVLSKGGEALSNPIQIDASTIAIGCWKGRASLSVMVTAIDCQELLERLLMRLE**************************************
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MKSLQTEVIEEGEVEPIRPLPWYPNNLAWHSNFSRMQLRKNQTLERFHKFLKLENEIGNITRQEAVSMVPPLFLDVQPDHFVLDMCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPLPVQEKHINPEEKMLPRNDDPPKKLQNQDTEEVNGMEVDLADGTDEKDPEGSLEANSIDNEDGAAVEPDPLTCEKVDSEETEVPVNTETKSERTGGKRKLQIQGKWKGIDPVIFFNDETIINSIKTFYGIDDSFQLSGQLVSRNGDTNRVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQTSREGNSAPCSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVIVLSKGGEALSNPIQIDASTIAIGCWKGRASLSVMVTAIDCxxxxxxxxxxxxxxxxxxxxxNALGTDEVQEEMNDNGKEEPESLEVAVNT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
tRNA (cytosine(34)-C(5))-methyltransferase RNA methyltransferase that methylates tRNAs, and possibly RNA polymerase III transcripts. Methylates cytosine to 5-methylcytosine (m5C) at position 34 of intron-containing tRNA(Leu)(CAA) precursors. Not able to modify tRNAs at positions 48 or 49 (By similarity). May act downstream of Myc to regulate epidermal cell growth and proliferation. Required for proper spindle assembly and chromosome segregation, independently of its methyltransferase activity.probableQ1HFZ0
tRNA (cytosine(34)-C(5))-methyltransferase RNA methyltransferase that methylates tRNAs, and possibly RNA polymerase III transcripts. Methylates cytosine to 5-methylcytosine (m5C) at position 34 of intron-containing tRNA(Leu)(CAA) precursors. Not able to modify tRNAs at positions 48 or 49. May act downstream of Myc to regulate epidermal cell growth and proliferation. Required for proper spindle assembly and chromosome segregation, independently of its methyltransferase activity.probableQ08J23

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.1.-.-Transferring one-carbon groups.probable
2.1.1.-15-hydroxyprostaglandin-I dehydrogenase (NADP(+)).probable
2.1.1.29Transferred entry: 2.1.1.202, 2.1.1.203 and 2.1.1.204.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2FRX, chain A
Confidence level:very confident
Coverage over the Query: 17-152,173-279,355-401,478-622,634-644
View the alignment between query and template
View the model in PyMOL
Template: 2PLW, chain A
Confidence level:confident
Coverage over the Query: 76-123,135-253
View the alignment between query and template
View the model in PyMOL
Template: 3M6X, chain A
Confidence level:probable
Coverage over the Query: 4-160,176-252
View the alignment between query and template
View the model in PyMOL