BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004776
         (731 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|219879370|gb|ACL51017.1| class III HD-Zip protein 8 [Citrus trifoliata]
          Length = 829

 Score = 1445 bits (3741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 696/701 (99%), Positives = 697/701 (99%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ+RRCR
Sbjct: 1   MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQDRRCR 60

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT
Sbjct: 61  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 120

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 201
           SCESV TSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK
Sbjct: 121 SCESVATSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 180

Query: 202 PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS 261
           PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS
Sbjct: 181 PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS 240

Query: 262 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 321
           SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV
Sbjct: 241 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 300

Query: 322 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL 381
           RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL
Sbjct: 301 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL 360

Query: 382 RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV 441
           RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV
Sbjct: 361 RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV 420

Query: 442 NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDA 501
           NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDA
Sbjct: 421 NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDA 480

Query: 502 YSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDI 561
           YSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDI
Sbjct: 481 YSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDI 540

Query: 562 FLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDL 621
           FLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDL
Sbjct: 541 FLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDL 600

Query: 622 ASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQ 681
           ASALEVGPTGNKASGDSSTQCGS KSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQ
Sbjct: 601 ASALEVGPTGNKASGDSSTQCGSKKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQ 660

Query: 682 RVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           RVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRC  
Sbjct: 661 RVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYL 701


>gi|224092274|ref|XP_002309538.1| predicted protein [Populus trichocarpa]
 gi|60327635|gb|AAX19057.1| class III HD-Zip protein 8 [Populus trichocarpa]
 gi|222855514|gb|EEE93061.1| predicted protein [Populus trichocarpa]
          Length = 828

 Score = 1305 bits (3378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/705 (90%), Positives = 664/705 (94%), Gaps = 9/705 (1%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILS+IEPKQIKVWFQNRRCR
Sbjct: 1   MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSHIEPKQIKVWFQNRRCR 60

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN++FRQQTQNA  LATTDT
Sbjct: 61  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYFRQQTQNATNLATTDT 120

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 201
           SCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEETL +FLSKATGTAVEWVQMPGMK
Sbjct: 121 SCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETLAQFLSKATGTAVEWVQMPGMK 176

Query: 202 PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS 261
           PGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKDRPSW+RDCR+V+VVN L TGS
Sbjct: 177 PGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVVNALSTGS 236

Query: 262 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 321
            GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP   HFV
Sbjct: 237 GGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPTQHFV 296

Query: 322 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL 381
           RAEMLPSGYLIRPCEGGGSIIH+VDHMDLEPWSVPEVLRPLYESSTL+AQKTTMAALRHL
Sbjct: 297 RAEMLPSGYLIRPCEGGGSIIHVVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALRHL 356

Query: 382 RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV 441
           RQ+SQEVSQP+VTGWGRRPAALRALSQRLS+GFNEA+NGF DEGWSMLESDGIDDVTV V
Sbjct: 357 RQVSQEVSQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFADEGWSMLESDGIDDVTVLV 416

Query: 442 NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDA 501
           NSSP+KMMGV  SY NGFPSMSNAVLCAKASMLLQ+VPPAILLRFLREHRSEWADS IDA
Sbjct: 417 NSSPAKMMGVNFSYANGFPSMSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADSGIDA 476

Query: 502 YSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE----FLEVIKLENMAHYREDMIM 557
           Y+AAAVKAGPCSLP+ RAGNFGGQVILPLAHTIEHEE    F+EVIKLENM  YREDM+M
Sbjct: 477 YAAAAVKAGPCSLPMSRAGNFGGQVILPLAHTIEHEEASTSFMEVIKLENMG-YREDMLM 535

Query: 558 PSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNR 617
           P D+FLLQLCSGVDENAVG CAEL+FAPIDASFSDDAPIIPSGFRIIPLDSG D  SPNR
Sbjct: 536 PGDVFLLQLCSGVDENAVGTCAELIFAPIDASFSDDAPIIPSGFRIIPLDSGMDASSPNR 595

Query: 618 TLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGII 677
           TLDLASALEVGP GN+ASGD S + G TKSV+TIAFQFAFEMHLQENVASMARQYVR II
Sbjct: 596 TLDLASALEVGPAGNRASGDLSGRSGCTKSVMTIAFQFAFEMHLQENVASMARQYVRSII 655

Query: 678 ASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           ASVQRVALALSPS FGS+AG RPPPG+PEAHTLARWIC+SYRC  
Sbjct: 656 ASVQRVALALSPSHFGSHAGFRPPPGTPEAHTLARWICESYRCYL 700


>gi|359476025|ref|XP_002283717.2| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Vitis
           vinifera]
 gi|296081833|emb|CBI20838.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score = 1300 bits (3363), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/721 (87%), Positives = 669/721 (92%), Gaps = 12/721 (1%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAVSS      +D+   KM +DNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECP
Sbjct: 1   MAVSS----SCKDA---KMALDNGKYVRYTPEQVEALERLYHDCPKPSSLRRQQLIRECP 53

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY
Sbjct: 54  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 113

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLT 181
           EN+FFRQQTQNA TLATTDTSCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEETLT
Sbjct: 114 ENSFFRQQTQNA-TLATTDTSCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETLT 168

Query: 182 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDR 241
           EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLV L+PTRVAEILKD 
Sbjct: 169 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVSLEPTRVAEILKDW 228

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 301
           PSWYR+CR+V+V+NVL TG+ GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC
Sbjct: 229 PSWYRECRNVDVLNVLSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 288

Query: 302 ERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 361
           ERSLNNTQNGPSMP   +FVRAE LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP
Sbjct: 289 ERSLNNTQNGPSMPPVQYFVRAEKLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 348

Query: 362 LYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
           LYESSTL+AQKTTMAALR LRQISQEVSQP+ TGWGRRPAALRAL QRL++GFNEA+NGF
Sbjct: 349 LYESSTLLAQKTTMAALRQLRQISQEVSQPTNTGWGRRPAALRALGQRLTKGFNEAVNGF 408

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
           TDEGWSM+ESDGIDDVT+ VNSSP+KMMGV LSY +GFPSMSNAVLCAKASMLLQ+VPPA
Sbjct: 409 TDEGWSMMESDGIDDVTLLVNSSPAKMMGVNLSYASGFPSMSNAVLCAKASMLLQNVPPA 468

Query: 482 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLE 541
           ILLRFLREHRSEWADSSIDAYSAAAVKAGPC+LPV RAG +GGQVILPLAHTIEHEEF+E
Sbjct: 469 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCTLPVSRAGGYGGQVILPLAHTIEHEEFME 528

Query: 542 VIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGF 601
           VIKLEN+ HYRED++M  D+FLLQLCSGVD+NAVG C+EL+FAPIDASFSDDAP++PSGF
Sbjct: 529 VIKLENVDHYREDLMMSGDVFLLQLCSGVDDNAVGTCSELIFAPIDASFSDDAPLLPSGF 588

Query: 602 RIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHL 661
           RIIPLDSG D  SPNRTLDLAS+LEVGP GNKAS D+S   GS KSV+TI+FQFAFEMHL
Sbjct: 589 RIIPLDSGVDGSSPNRTLDLASSLEVGPAGNKASSDNSGHTGSAKSVMTISFQFAFEMHL 648

Query: 662 QENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCV 721
           QENVASMARQYVR II+SVQRVALALSPSRFG   G RP PG+PEAHTLARWICQSYRC 
Sbjct: 649 QENVASMARQYVRSIISSVQRVALALSPSRFGPQMGFRPLPGTPEAHTLARWICQSYRCY 708

Query: 722 F 722
            
Sbjct: 709 L 709


>gi|383930759|gb|AFH56718.1| class III HD-Zip protein 8 [Prunus persica]
          Length = 840

 Score = 1290 bits (3338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/723 (86%), Positives = 663/723 (91%), Gaps = 12/723 (1%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           MMAV+S         GG KM MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC
Sbjct: 1   MMAVTSACK-----DGGMKMQMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 55

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           PILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV
Sbjct: 56  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 115

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETL 180
           YEN++FRQQTQN   LATTDTSCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEETL
Sbjct: 116 YENSYFRQQTQNT-NLATTDTSCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETL 170

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
            EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKD
Sbjct: 171 AEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKD 230

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSW+R+CRSV+V+NVL TG+ GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV
Sbjct: 231 RPSWFRNCRSVDVLNVLSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 290

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSLNNTQNGPSMP   +FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR
Sbjct: 291 CERSLNNTQNGPSMPPVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 350

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESSTL+AQKTTMAALR+LRQISQEVSQP+  GWGRRPAALRALSQRLS+GFNEA+NG
Sbjct: 351 PLYESSTLLAQKTTMAALRNLRQISQEVSQPNAAGWGRRPAALRALSQRLSKGFNEAVNG 410

Query: 421 FTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
           FTDEGWS+LESDG+DDVT+ VNSSP KMMG  L Y NG PSMSNAVLCAKASMLLQ+VPP
Sbjct: 411 FTDEGWSILESDGVDDVTLLVNSSPGKMMGANL-YANGVPSMSNAVLCAKASMLLQNVPP 469

Query: 481 AILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFL 540
           AILLRFLREHRSEWAD SIDAYSAAA+K GPC L   RAG FG QVI PLAHTIEHEEF+
Sbjct: 470 AILLRFLREHRSEWADRSIDAYSAAAIKPGPCGLLGSRAGGFGDQVIHPLAHTIEHEEFM 529

Query: 541 EVIKLENMAHYREDMIMP-SDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPS 599
           EVIK+ENM HYREDMIMP +DIFLLQLCSGVDEN+VG CAELVFAPIDASFSDD PI+PS
Sbjct: 530 EVIKIENMGHYREDMIMPAADIFLLQLCSGVDENSVGTCAELVFAPIDASFSDDGPILPS 589

Query: 600 GFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           GFRIIPLDS  D PSPNRTLDLASALEVGP G++ASGD++   G+TKSV+TIAFQFAFE+
Sbjct: 590 GFRIIPLDSRMDAPSPNRTLDLASALEVGPAGSRASGDNAGHSGNTKSVMTIAFQFAFEI 649

Query: 660 HLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           HLQ+NVASMARQYVR IIASVQRVALALSPSRFGSN+G RPPPG+PEA TLA WICQSYR
Sbjct: 650 HLQDNVASMARQYVRSIIASVQRVALALSPSRFGSNSGFRPPPGTPEAQTLAGWICQSYR 709

Query: 720 CVF 722
           C  
Sbjct: 710 CYL 712


>gi|147790308|emb|CAN61201.1| hypothetical protein VITISV_009744 [Vitis vinifera]
          Length = 839

 Score = 1288 bits (3332), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/714 (86%), Positives = 660/714 (92%), Gaps = 16/714 (2%)

Query: 20  MIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRR 79
           M +DNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRR
Sbjct: 1   MALDNGKYVRYTPEQVEALERLYHDCPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 60

Query: 80  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATT 139
           CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN+FFRQQTQNA TLATT
Sbjct: 61  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTQNA-TLATT 119

Query: 140 DTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG 199
           DTSCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG
Sbjct: 120 DTSCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG 175

Query: 200 MKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPT 259
           MKPGPDSIGIVAISHGCTGVAARACGLV L+PTRVAEILKD PSWYR+CR+V+V+NVL T
Sbjct: 176 MKPGPDSIGIVAISHGCTGVAARACGLVSLEPTRVAEILKDWPSWYRECRNVDVLNVLST 235

Query: 260 GSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
           G+ GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP   +
Sbjct: 236 GNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQY 295

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR 379
           FVRAE LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL+AQKTTMAALR
Sbjct: 296 FVRAEKLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALR 355

Query: 380 HLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTV 439
            LRQISQEVSQP+ TGWGRRPAALRAL QRL++GFNEA+NGFTDEGWSM+ESDGIDDVT+
Sbjct: 356 QLRQISQEVSQPTNTGWGRRPAALRALGQRLTKGFNEAVNGFTDEGWSMMESDGIDDVTL 415

Query: 440 HVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSI 499
            VNSSP+KMMGV LSY +GFPSMSNAVLCAKASMLLQ+VPPAILLRFLREHRSEWADSSI
Sbjct: 416 LVNSSPAKMMGVNLSYASGFPSMSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADSSI 475

Query: 500 DAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE-----------FLEVIKLENM 548
           DAYSAAAVKAGPC+LPV RAG +GGQVILPLAHTIEHEE           F+EVIKLEN+
Sbjct: 476 DAYSAAAVKAGPCTLPVSRAGGYGGQVILPLAHTIEHEEANLIRFNCLQQFMEVIKLENV 535

Query: 549 AHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDS 608
            HYRED++M  D+FLLQLCSGVD+NAVG C+EL+FAPIDASFSDDAP++PSGFRIIPLDS
Sbjct: 536 DHYREDLMMSGDVFLLQLCSGVDDNAVGTCSELIFAPIDASFSDDAPLLPSGFRIIPLDS 595

Query: 609 GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASM 668
           G D  SPNRTLDLAS+LEVGP GNKAS D+S   GS KSV+TI+FQFAFEMHLQENVASM
Sbjct: 596 GVDGSSPNRTLDLASSLEVGPAGNKASSDNSGHTGSAKSVMTISFQFAFEMHLQENVASM 655

Query: 669 ARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           ARQYVR II+SVQRVALALSPSRFG   G RP PG+PEAHTLARWICQSYRC  
Sbjct: 656 ARQYVRSIISSVQRVALALSPSRFGPQMGFRPLPGTPEAHTLARWICQSYRCYL 709


>gi|206572107|gb|ACI13686.1| putative HB8 HD-ZipIII [Malus x domestica]
          Length = 844

 Score = 1287 bits (3330), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/723 (86%), Positives = 670/723 (92%), Gaps = 8/723 (1%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           MMAV+S     S   GG KM MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC
Sbjct: 1   MMAVTS-----SCKDGGMKMQMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 55

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           PILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV
Sbjct: 56  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 115

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETL 180
           YEN++FRQQTQNA TLATTDTSC+SVVTSGQHHLTPQQ    PPRDASPAGLLSIAEETL
Sbjct: 116 YENSYFRQQTQNA-TLATTDTSCDSVVTSGQHHLTPQQHPPPPPRDASPAGLLSIAEETL 174

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
            EFLSKATGTAVEWVQ+PGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD
Sbjct: 175 AEFLSKATGTAVEWVQLPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 234

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSW+R+CRSV+V+NVL TG+ GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV
Sbjct: 235 RPSWFRNCRSVDVLNVLSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 294

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSLNNTQNGPSMP   +FVRAEMLPSGYLIRPCEGGGSI+HIVDHMDLEPWSVPEVLR
Sbjct: 295 CERSLNNTQNGPSMPPVQNFVRAEMLPSGYLIRPCEGGGSILHIVDHMDLEPWSVPEVLR 354

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESSTL+AQKTTMAALR+LRQISQEVSQP+  GWGRRPAALRALSQRLS+GFNEA+NG
Sbjct: 355 PLYESSTLLAQKTTMAALRNLRQISQEVSQPNSAGWGRRPAALRALSQRLSKGFNEAVNG 414

Query: 421 FTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
           FTDEGWS+LESDG+DDVT+ VNSSP KMM   L Y NG PSMS AVLCAKASMLLQ+VPP
Sbjct: 415 FTDEGWSVLESDGVDDVTLLVNSSPGKMMSANL-YTNGVPSMSTAVLCAKASMLLQNVPP 473

Query: 481 AILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFL 540
           AILLRFLREHRSEWAD SIDAYSAAA+KAGPC++  PRAG+FG QVILPLAHTIEHEEF+
Sbjct: 474 AILLRFLREHRSEWADRSIDAYSAAAIKAGPCNMLGPRAGSFGDQVILPLAHTIEHEEFM 533

Query: 541 EVIKLENMAHYREDMIMP-SDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPS 599
           EVIK+ENM HYREDM+MP +DIFLLQLCSGVDENAVG CAELVFAPIDASFSDDAPI+PS
Sbjct: 534 EVIKIENMGHYREDMMMPAADIFLLQLCSGVDENAVGTCAELVFAPIDASFSDDAPILPS 593

Query: 600 GFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           GFRIIPLDS  DTPSPNRTLDLASALEVGP G++ASGD++   G+TKSV+TIAFQFAFE+
Sbjct: 594 GFRIIPLDSRMDTPSPNRTLDLASALEVGPAGSRASGDNAGHSGNTKSVMTIAFQFAFEI 653

Query: 660 HLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           HLQEN+A+MARQYVR IIASVQRVALALSPS FGS+AG RPPPG+PEA TLA WICQSYR
Sbjct: 654 HLQENIAAMARQYVRSIIASVQRVALALSPSHFGSHAGFRPPPGTPEAQTLAGWICQSYR 713

Query: 720 CVF 722
           C  
Sbjct: 714 CYL 716


>gi|224142954|ref|XP_002324794.1| predicted protein [Populus trichocarpa]
 gi|60327633|gb|AAX19056.1| class III HD-Zip protein 7 [Populus trichocarpa]
 gi|222866228|gb|EEF03359.1| predicted protein [Populus trichocarpa]
          Length = 823

 Score = 1282 bits (3318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/698 (88%), Positives = 654/698 (93%), Gaps = 6/698 (0%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MDNGKYVRYTPEQVEALERLYHECPKP+S RRQQLIRECPILS+IEPKQIKVWFQNRRCR
Sbjct: 1   MDNGKYVRYTPEQVEALERLYHECPKPTSTRRQQLIRECPILSHIEPKQIKVWFQNRRCR 60

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN++FRQQTQNA TLATTDT
Sbjct: 61  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYFRQQTQNATTLATTDT 120

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 201
           SCESVVTSGQH LTPQ    HPPRDASPAGLLSIAEE L +FLSKATGTAVEWVQMPGMK
Sbjct: 121 SCESVVTSGQHRLTPQ----HPPRDASPAGLLSIAEENLAQFLSKATGTAVEWVQMPGMK 176

Query: 202 PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS 261
           PGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKDRPSW+RDCR+V+V+N + T +
Sbjct: 177 PGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVINAMSTAN 236

Query: 262 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 321
            GTIELLYMQLYAPTTLAPARDF LLRYTSVLEDGSLVVCERSLNNTQNGPSMP   HFV
Sbjct: 237 GGTIELLYMQLYAPTTLAPARDFLLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPTQHFV 296

Query: 322 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL 381
           RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL+AQKTTMAALRHL
Sbjct: 297 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALRHL 356

Query: 382 RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV 441
           RQISQE+SQP+VTGWGRRPAALRALSQRLS+GFNEA+NGF DEGWS+LESDGIDDVTV V
Sbjct: 357 RQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFADEGWSLLESDGIDDVTVLV 416

Query: 442 NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDA 501
           NSSP+K MGV  SY NGFPSM+NAVLCAKASMLLQ+VPPAILLRFLREHRSEWAD+ IDA
Sbjct: 417 NSSPTKTMGVNFSYDNGFPSMNNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNGIDA 476

Query: 502 YSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDI 561
           Y+A+A+KAGPCSLPV RAGNFGGQVILPLAHTIE+EE  +VIKLENM  YREDM+MP D+
Sbjct: 477 YAASAIKAGPCSLPVSRAGNFGGQVILPLAHTIENEE-AKVIKLENMG-YREDMLMPGDV 534

Query: 562 FLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDL 621
           FLLQLCSGVDENAVG CAEL+FAPIDASFSDDAPIIPSGFRIIPLDSG D  SPNRTLDL
Sbjct: 535 FLLQLCSGVDENAVGTCAELIFAPIDASFSDDAPIIPSGFRIIPLDSGMDASSPNRTLDL 594

Query: 622 ASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQ 681
           ASALEVGP GN+ASGD S + G TKSV+TIAFQFAFEMHLQENVASMARQYVR IIASVQ
Sbjct: 595 ASALEVGPAGNRASGDLSGRSGCTKSVMTIAFQFAFEMHLQENVASMARQYVRSIIASVQ 654

Query: 682 RVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           RVALALSPS FGS+AG  PP G+PEAHTLARWIC+SYR
Sbjct: 655 RVALALSPSHFGSHAGFWPPHGTPEAHTLARWICESYR 692


>gi|302398629|gb|ADL36609.1| BZIP domain class transcription factor [Malus x domestica]
          Length = 841

 Score = 1281 bits (3315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/722 (86%), Positives = 665/722 (92%), Gaps = 10/722 (1%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAV+S     S   GG KM MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP
Sbjct: 1   MAVTS-----SCKDGGMKMQMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 55

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY
Sbjct: 56  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVY 115

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLT 181
           ENT+FRQ TQNA TLATTDTSCESVVTSGQHHLT QQ    PPRDASPAGLLSIA+ETL 
Sbjct: 116 ENTYFRQHTQNA-TLATTDTSCESVVTSGQHHLTAQQHP--PPRDASPAGLLSIAQETLA 172

Query: 182 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDR 241
           EFLSKATGTAVEWVQ+PGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDR
Sbjct: 173 EFLSKATGTAVEWVQLPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDR 232

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 301
           PSW+R+CRSV+V NV+ TG+ GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC
Sbjct: 233 PSWFRNCRSVDVANVMSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 292

Query: 302 ERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 361
           ERSLNNTQNGPSMP   +FVRAEMLPSGYLIRPCEGGGSI+HIVDHMDLEPWSVPEVLRP
Sbjct: 293 ERSLNNTQNGPSMPPVQNFVRAEMLPSGYLIRPCEGGGSILHIVDHMDLEPWSVPEVLRP 352

Query: 362 LYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
           LYESST++AQKTTMAALR+LRQISQEVSQP+  GWGRRPAALRALSQRLS+GFNEA+NGF
Sbjct: 353 LYESSTILAQKTTMAALRNLRQISQEVSQPNSAGWGRRPAALRALSQRLSKGFNEAVNGF 412

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
           TDEGWS+LESDG+DDVT+ VNSSP KMM   L Y +G PSMS AVLCAKASMLLQ+VPPA
Sbjct: 413 TDEGWSVLESDGVDDVTLLVNSSPGKMMSANL-YTDGVPSMSTAVLCAKASMLLQNVPPA 471

Query: 482 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLE 541
           ILLRFLREHRSEWAD SIDAYSAAAVKAGPC++  PR G+FG  VILPLAHTIEHEEF+E
Sbjct: 472 ILLRFLREHRSEWADRSIDAYSAAAVKAGPCNMLGPRVGSFGDNVILPLAHTIEHEEFME 531

Query: 542 VIKLENMAHYREDMIMP-SDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSG 600
           VIK+EN+ HYREDMIMP +DIFLLQLCSGVDENAVG C+ELVFAPIDASFSDDAPI+PSG
Sbjct: 532 VIKIENLGHYREDMIMPAADIFLLQLCSGVDENAVGTCSELVFAPIDASFSDDAPILPSG 591

Query: 601 FRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMH 660
           FRIIPLDS  DTPSPNRTLDLASALEVGP G++ASGD++   G+TKSV+TIAFQFAFE+H
Sbjct: 592 FRIIPLDSRMDTPSPNRTLDLASALEVGPAGSRASGDNAGHSGNTKSVMTIAFQFAFEIH 651

Query: 661 LQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRC 720
           LQENVASMARQYVR IIASVQRVALALSPSRFGS+AG RPPPG+P+A TLA WICQSYRC
Sbjct: 652 LQENVASMARQYVRSIIASVQRVALALSPSRFGSHAGFRPPPGTPQAQTLAGWICQSYRC 711

Query: 721 VF 722
             
Sbjct: 712 YL 713


>gi|225442501|ref|XP_002284003.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 1
           [Vitis vinifera]
          Length = 837

 Score = 1264 bits (3271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/704 (86%), Positives = 650/704 (92%), Gaps = 5/704 (0%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K IMDNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 9   KGIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 68

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQN  TLAT
Sbjct: 69  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNT-TLAT 127

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
            DTSCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP
Sbjct: 128 KDTSCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 183

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKDRPSW+RDCR+V+V+NVLP
Sbjct: 184 GMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLP 243

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
           T + GTIELLYMQLYAPTTLAPARDFWLLRYTSV+EDGSLVVCERSL NTQNGPSMP   
Sbjct: 244 TANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQ 303

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
           HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQKTTMAAL
Sbjct: 304 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL 363

Query: 379 RHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
           R LRQI+QEVSQ +VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM+ +DGIDDVT
Sbjct: 364 RQLRQIAQEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGIDDVT 423

Query: 439 VHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSS 498
           + VNSSP K+ G+ LS+ NGFP++SNAVLCAKASMLLQ+VPPAILLRFLREHRSEWAD++
Sbjct: 424 ILVNSSPEKLTGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNN 483

Query: 499 IDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMP 558
           IDAYSAAAVK GPCSLP  R G+FG QVILPLAHTIEHEEFLEVIKLE + H  ED +MP
Sbjct: 484 IDAYSAAAVKVGPCSLPGSRVGSFGSQVILPLAHTIEHEEFLEVIKLEGVGHCPEDAMMP 543

Query: 559 SDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRT 618
            D+FLLQLCSG+DENAVG CAEL+FAPIDASF+DDAP++PSGFRIIPLDSGK+  SPNRT
Sbjct: 544 RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPNRT 603

Query: 619 LDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA 678
           LDLASALE+GP GN++S D S   G+T+SV+TIAF+FAFE HLQENVASMARQYVR II+
Sbjct: 604 LDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAFESHLQENVASMARQYVRSIIS 663

Query: 679 SVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           SVQRVALALSPS   S+AGLRPP G+PEAHTLARWI  SYRC  
Sbjct: 664 SVQRVALALSPSHLSSHAGLRPPLGTPEAHTLARWISHSYRCYL 707


>gi|297743212|emb|CBI36079.3| unnamed protein product [Vitis vinifera]
          Length = 835

 Score = 1264 bits (3271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/704 (86%), Positives = 650/704 (92%), Gaps = 5/704 (0%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K IMDNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 7   KGIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 66

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQN  TLAT
Sbjct: 67  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNT-TLAT 125

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
            DTSCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP
Sbjct: 126 KDTSCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 181

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKDRPSW+RDCR+V+V+NVLP
Sbjct: 182 GMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLP 241

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
           T + GTIELLYMQLYAPTTLAPARDFWLLRYTSV+EDGSLVVCERSL NTQNGPSMP   
Sbjct: 242 TANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQ 301

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
           HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQKTTMAAL
Sbjct: 302 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL 361

Query: 379 RHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
           R LRQI+QEVSQ +VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM+ +DGIDDVT
Sbjct: 362 RQLRQIAQEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGIDDVT 421

Query: 439 VHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSS 498
           + VNSSP K+ G+ LS+ NGFP++SNAVLCAKASMLLQ+VPPAILLRFLREHRSEWAD++
Sbjct: 422 ILVNSSPEKLTGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNN 481

Query: 499 IDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMP 558
           IDAYSAAAVK GPCSLP  R G+FG QVILPLAHTIEHEEFLEVIKLE + H  ED +MP
Sbjct: 482 IDAYSAAAVKVGPCSLPGSRVGSFGSQVILPLAHTIEHEEFLEVIKLEGVGHCPEDAMMP 541

Query: 559 SDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRT 618
            D+FLLQLCSG+DENAVG CAEL+FAPIDASF+DDAP++PSGFRIIPLDSGK+  SPNRT
Sbjct: 542 RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPNRT 601

Query: 619 LDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA 678
           LDLASALE+GP GN++S D S   G+T+SV+TIAF+FAFE HLQENVASMARQYVR II+
Sbjct: 602 LDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAFESHLQENVASMARQYVRSIIS 661

Query: 679 SVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           SVQRVALALSPS   S+AGLRPP G+PEAHTLARWI  SYRC  
Sbjct: 662 SVQRVALALSPSHLSSHAGLRPPLGTPEAHTLARWISHSYRCYL 705


>gi|356515619|ref|XP_003526496.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Glycine
           max]
          Length = 845

 Score = 1263 bits (3267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/728 (84%), Positives = 662/728 (90%), Gaps = 15/728 (2%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           MMAVSS      +D  G K+ +DNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIREC
Sbjct: 1   MMAVSSA----CKD--GSKVALDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIREC 54

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LV
Sbjct: 55  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLV 114

Query: 121 YENTFFRQQTQNA-ATLATTDT--SCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAE 177
           YEN+FFRQQT N  ATLATTDT  SCESVVTSGQ +LTPQQ   HPPRDASPAGLLSIAE
Sbjct: 115 YENSFFRQQTHNNNATLATTDTNTSCESVVTSGQRNLTPQQ---HPPRDASPAGLLSIAE 171

Query: 178 ETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEI 237
           ETL EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGC GVAARACGLVGL+PTRVAEI
Sbjct: 172 ETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEI 231

Query: 238 LKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGS 297
           LKDR SW+RDCR+V+V+NV+ TG+ GTIELLYMQLYAPTTLAP RDFWLLRYTS+LEDGS
Sbjct: 232 LKDRLSWFRDCRTVDVLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGS 291

Query: 298 LVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPE 357
            VVCERSLNNTQNGP+MP   HFVRA+MLPSGYLIRPCEGGGSIIHIVDHM LEPWSVPE
Sbjct: 292 FVVCERSLNNTQNGPAMPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMVLEPWSVPE 351

Query: 358 VLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEA 417
           VLRPLYESS L+AQ+TTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLS+GFNEA
Sbjct: 352 VLRPLYESSMLLAQRTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEA 411

Query: 418 LNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSY-VNGFPSMSNAVLCAKASMLLQ 476
           +NGF D+GWSMLESDGIDDVT+ VNSSPSKMMGV L Y  NGFPS+S++VLCAKASMLLQ
Sbjct: 412 VNGFADDGWSMLESDGIDDVTLLVNSSPSKMMGVSLVYNNNGFPSVSSSVLCAKASMLLQ 471

Query: 477 DVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEH 536
           +VPPAILLRFLREHRSEWADSSIDAYSAAA+KAGPCSLP  R+G FGGQVILPLAHTIEH
Sbjct: 472 NVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCSLPGARSGGFGGQVILPLAHTIEH 531

Query: 537 EEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPI 596
           EEF+EVIKLENM +YR+DM +P D+FLLQLCSGVDE+AVG  AELVFAPIDASFSDDAPI
Sbjct: 532 EEFMEVIKLENMGYYRDDMSIPGDVFLLQLCSGVDEHAVGTSAELVFAPIDASFSDDAPI 591

Query: 597 IPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFA 656
           +PSGFRIIPLDSG D  SPNRTLDLASALEVG T NKA+ D+S   GSTKSV+TIAFQFA
Sbjct: 592 LPSGFRIIPLDSGTDAASPNRTLDLASALEVGTTANKAASDNSAHSGSTKSVMTIAFQFA 651

Query: 657 FEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQ 716
           FE+HLQEN+A+MARQYVR IIASVQRV+LALSPSRFGS+     PPG+PEA TLARWIC 
Sbjct: 652 FEVHLQENIATMARQYVRSIIASVQRVSLALSPSRFGSHNAFHLPPGTPEAQTLARWICN 711

Query: 717 SYRCVFYF 724
           SYR  FY 
Sbjct: 712 SYR--FYL 717


>gi|356507931|ref|XP_003522716.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Glycine
           max]
          Length = 844

 Score = 1261 bits (3263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/727 (84%), Positives = 660/727 (90%), Gaps = 14/727 (1%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           MM VSS      +D  G K+ +DNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIREC
Sbjct: 1   MMTVSSA----CKD--GSKVALDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIREC 54

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LV
Sbjct: 55  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLV 114

Query: 121 YENTFFRQQTQNAATLATTDT--SCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEE 178
           YEN+FFRQQT N ATLATTDT  SCESVVTSGQ +LTPQQ   HPPRDASPAGLLSIAEE
Sbjct: 115 YENSFFRQQTHNNATLATTDTNTSCESVVTSGQRNLTPQQ---HPPRDASPAGLLSIAEE 171

Query: 179 TLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEIL 238
           TL EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGC GVAARACGLVGL+P RVAEIL
Sbjct: 172 TLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPARVAEIL 231

Query: 239 KDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL 298
           KDR SW+RDCR+V+V+NV+ TG+ GTIELLYMQLYAPTTLAP RDFWLLRYTS+LEDGSL
Sbjct: 232 KDRLSWFRDCRTVDVLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSL 291

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
           VVCERSLNNTQNGP+MP   HFVRA+ML SGYLIRPCEGGGSIIHIVDHM LEPWSVPEV
Sbjct: 292 VVCERSLNNTQNGPAMPPVQHFVRADMLASGYLIRPCEGGGSIIHIVDHMVLEPWSVPEV 351

Query: 359 LRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEAL 418
           LRPLYESS L+AQ+TTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLS+GFNEA+
Sbjct: 352 LRPLYESSMLLAQRTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAV 411

Query: 419 NGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSY-VNGFPSMSNAVLCAKASMLLQD 477
           NGF D+GWSMLESDGIDDVT+ VNSSPSKMMGV L Y  NGFPS+S+++LCAKASMLLQ+
Sbjct: 412 NGFADDGWSMLESDGIDDVTLLVNSSPSKMMGVNLGYNNNGFPSVSSSLLCAKASMLLQN 471

Query: 478 VPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHE 537
           VPPAILLRFLREHRSEWADSSIDAYSAAA+KAGPCSLP  R G FGGQVILPLAHTIEHE
Sbjct: 472 VPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCSLPGARPGGFGGQVILPLAHTIEHE 531

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPII 597
           EF+EVIKLENM +YR+DM +P D+FLLQLCSGVDE+AVG  AELVFAPIDASFSDDAPI+
Sbjct: 532 EFMEVIKLENMGYYRDDMNIPGDVFLLQLCSGVDEHAVGTSAELVFAPIDASFSDDAPIL 591

Query: 598 PSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAF 657
           PSGFRIIPLDSG D  SPNRTLDLASALEVG T NKA+GD+S   GSTKSV+TIAFQFAF
Sbjct: 592 PSGFRIIPLDSGTDAASPNRTLDLASALEVGTTANKAAGDNSGHSGSTKSVMTIAFQFAF 651

Query: 658 EMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQS 717
           E+HLQEN+A+MARQYVR IIASVQRV+LALSPSRFGS+     PPG+PEA TLARWIC S
Sbjct: 652 EVHLQENIATMARQYVRSIIASVQRVSLALSPSRFGSHNAFHLPPGTPEAQTLARWICNS 711

Query: 718 YRCVFYF 724
           YR  FY 
Sbjct: 712 YR--FYL 716


>gi|225442505|ref|XP_002284009.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 2
           [Vitis vinifera]
          Length = 832

 Score = 1255 bits (3247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 604/707 (85%), Positives = 648/707 (91%), Gaps = 11/707 (1%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MDNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 1   MDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 60

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQN  TLAT DT
Sbjct: 61  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNT-TLATKDT 119

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 201
           SCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK
Sbjct: 120 SCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 175

Query: 202 PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS 261
           PGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKDRPSW+RDCR+V+V+NVLPT +
Sbjct: 176 PGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTAN 235

Query: 262 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 321
            GTIELLYMQLYAPTTLAPARDFWLLRYTSV+EDGSLVVCERSL NTQNGPSMP   HFV
Sbjct: 236 GGTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFV 295

Query: 322 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL 381
           RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQKTTMAALR L
Sbjct: 296 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 355

Query: 382 RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV 441
           RQI+QEVSQ +VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM+ +DGIDDVT+ V
Sbjct: 356 RQIAQEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGIDDVTILV 415

Query: 442 NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDA 501
           NSSP K+ G+ LS+ NGFP++SNAVLCAKASMLLQ+VPPAILLRFLREHRSEWAD++IDA
Sbjct: 416 NSSPEKLTGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDA 475

Query: 502 YSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE------FLEVIKLENMAHYREDM 555
           YSAAAVK GPCSLP  R G+FG QVILPLAHTIEHEE      FLEVIKLE + H  ED 
Sbjct: 476 YSAAAVKVGPCSLPGSRVGSFGSQVILPLAHTIEHEEASNLFIFLEVIKLEGVGHCPEDA 535

Query: 556 IMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSP 615
           +MP D+FLLQLCSG+DENAVG CAEL+FAPIDASF+DDAP++PSGFRIIPLDSGK+  SP
Sbjct: 536 MMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSP 595

Query: 616 NRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRG 675
           NRTLDLASALE+GP GN++S D S   G+T+SV+TIAF+FAFE HLQENVASMARQYVR 
Sbjct: 596 NRTLDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAFESHLQENVASMARQYVRS 655

Query: 676 IIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           II+SVQRVALALSPS   S+AGLRPP G+PEAHTLARWI  SYRC  
Sbjct: 656 IISSVQRVALALSPSHLSSHAGLRPPLGTPEAHTLARWISHSYRCYL 702


>gi|225442503|ref|XP_002284014.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 3
           [Vitis vinifera]
          Length = 854

 Score = 1254 bits (3244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/721 (84%), Positives = 650/721 (90%), Gaps = 22/721 (3%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K IMDNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 9   KGIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 68

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQN  TLAT
Sbjct: 69  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNT-TLAT 127

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
            DTSCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP
Sbjct: 128 KDTSCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 183

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKDRPSW+RDCR+V+V+NVLP
Sbjct: 184 GMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLP 243

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
           T + GTIELLYMQLYAPTTLAPARDFWLLRYTSV+EDGSLVVCERSL NTQNGPSMP   
Sbjct: 244 TANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQ 303

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
           HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQKTTMAAL
Sbjct: 304 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL 363

Query: 379 RHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
           R LRQI+QEVSQ +VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM+ +DGIDDVT
Sbjct: 364 RQLRQIAQEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGIDDVT 423

Query: 439 VHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLL-----------------QDVPPA 481
           + VNSSP K+ G+ LS+ NGFP++SNAVLCAKASMLL                 Q+VPPA
Sbjct: 424 ILVNSSPEKLTGLNLSFANGFPAVSNAVLCAKASMLLQVSFISCSDVLFTIYHFQNVPPA 483

Query: 482 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLE 541
           ILLRFLREHRSEWAD++IDAYSAAAVK GPCSLP  R G+FG QVILPLAHTIEHEEFLE
Sbjct: 484 ILLRFLREHRSEWADNNIDAYSAAAVKVGPCSLPGSRVGSFGSQVILPLAHTIEHEEFLE 543

Query: 542 VIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGF 601
           VIKLE + H  ED +MP D+FLLQLCSG+DENAVG CAEL+FAPIDASF+DDAP++PSGF
Sbjct: 544 VIKLEGVGHCPEDAMMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGF 603

Query: 602 RIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHL 661
           RIIPLDSGK+  SPNRTLDLASALE+GP GN++S D S   G+T+SV+TIAF+FAFE HL
Sbjct: 604 RIIPLDSGKEASSPNRTLDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAFESHL 663

Query: 662 QENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCV 721
           QENVASMARQYVR II+SVQRVALALSPS   S+AGLRPP G+PEAHTLARWI  SYRC 
Sbjct: 664 QENVASMARQYVRSIISSVQRVALALSPSHLSSHAGLRPPLGTPEAHTLARWISHSYRCY 723

Query: 722 F 722
            
Sbjct: 724 L 724


>gi|255549852|ref|XP_002515977.1| DNA binding protein, putative [Ricinus communis]
 gi|223544882|gb|EEF46397.1| DNA binding protein, putative [Ricinus communis]
          Length = 839

 Score = 1248 bits (3229), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 597/707 (84%), Positives = 646/707 (91%), Gaps = 5/707 (0%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           G Q   +DNGKYVRYTPEQVEALERLYHECPKPSS+RRQQ IRECPILSNIEPKQIKVWF
Sbjct: 8   GKQPANLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQFIRECPILSNIEPKQIKVWF 67

Query: 76  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAAT 135
           QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQN  T
Sbjct: 68  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNT-T 126

Query: 136 LATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV 195
           LAT DTSC+SVVTSGQHHLTPQ    H PRDASPAGLLSIAEETLTEFLSKATGTAVEWV
Sbjct: 127 LATKDTSCDSVVTSGQHHLTPQ----HQPRDASPAGLLSIAEETLTEFLSKATGTAVEWV 182

Query: 196 QMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVN 255
           QMPGMKPGPDSIGI+AISHGCTGVAARACGLVGL+PTRVAEILKDRPSW+RDCR+V+V+N
Sbjct: 183 QMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLN 242

Query: 256 VLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 315
           VLPT + GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLV+CERSL NTQNGPSMP
Sbjct: 243 VLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMP 302

Query: 316 QAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTM 375
              HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQKTTM
Sbjct: 303 PVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTM 362

Query: 376 AALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID 435
           AALR LRQI+QE SQ +VT WGRRPAALRALSQRLSRGFNEALNGFTDEGWSM+ +DG+D
Sbjct: 363 AALRQLRQIAQEASQSNVTNWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGMD 422

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWA 495
           DVT+ VNSSP K+MG+ LS+ NGFP++SNAVLCAKASMLLQ+VPPAILLRFLREHRSEWA
Sbjct: 423 DVTILVNSSPEKLMGLNLSFSNGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWA 482

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDM 555
           D++IDAYSAAA+K GPC+LP  R G+FGGQVILPLAHTIEHEEFLEVIKLE   H  ED 
Sbjct: 483 DNNIDAYSAAAIKVGPCTLPGTRIGSFGGQVILPLAHTIEHEEFLEVIKLEGAGHSPEDP 542

Query: 556 IMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSP 615
           IMP D+FLLQLCSG+DENAVG CAEL+FAPIDASF+DDAP++PSGFRIIPLDS K+  SP
Sbjct: 543 IMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEASSP 602

Query: 616 NRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRG 675
           NRTLDLASALE+GP GNK+S D S+  G  +SV+TIAF+FAFE H+QE+VASMARQYVR 
Sbjct: 603 NRTLDLASALEIGPAGNKSSTDYSSNSGCMRSVMTIAFEFAFESHMQEHVASMARQYVRS 662

Query: 676 IIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           II+SVQRVALALSPS  GS+AGLR P G+PEA TLARWICQSYRC  
Sbjct: 663 IISSVQRVALALSPSHSGSHAGLRTPLGTPEAQTLARWICQSYRCYL 709


>gi|357466691|ref|XP_003603630.1| Class III HD-Zip protein [Medicago truncatula]
 gi|355492678|gb|AES73881.1| Class III HD-Zip protein [Medicago truncatula]
          Length = 834

 Score = 1247 bits (3227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/723 (84%), Positives = 652/723 (90%), Gaps = 17/723 (2%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAVSSG     +D  G K+ MDNGKYVRYTPEQVEALERLYHECPKP+S+RRQQLIRECP
Sbjct: 1   MAVSSG----CKD--GSKIAMDNGKYVRYTPEQVEALERLYHECPKPTSLRRQQLIRECP 54

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILS+IEPKQIKVWFQNRRCREKQRKEA RLQAVNRKLTAMNKLLMEENDRLQKQVS LVY
Sbjct: 55  ILSHIEPKQIKVWFQNRRCREKQRKEAGRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVY 114

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLT 181
           ENTFFRQ TQN  TLATTDTSCESVVTSGQ H  PQ      PRDASPAGLLSIAEETL 
Sbjct: 115 ENTFFRQHTQNT-TLATTDTSCESVVTSGQQH--PQ------PRDASPAGLLSIAEETLA 165

Query: 182 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDR 241
           EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHG  GVAARACGLVGL+P RVAEILKDR
Sbjct: 166 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGSPGVAARACGLVGLEPARVAEILKDR 225

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 301
            SWYRDCR+V+V+NV+ TG+ GTIELLYMQLYAPTTLAP RDFWLLRYTS+LEDGSLVVC
Sbjct: 226 LSWYRDCRTVDVLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVC 285

Query: 302 ERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 361
           ERSLNNTQNGPSMP  PHFVRAE+LPSGYLIRPCEGGGSIIHIVDHM LEPWSVPEVLRP
Sbjct: 286 ERSLNNTQNGPSMPPVPHFVRAEVLPSGYLIRPCEGGGSIIHIVDHMLLEPWSVPEVLRP 345

Query: 362 LYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
           LYESS L+AQ+TTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLS+GFNEA+NGF
Sbjct: 346 LYESSMLLAQRTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGF 405

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
           TD+GWSML+SDGIDDVT+ VNSSPSKMMG+ L Y NGFPS++++VLCAKASMLLQ+VPPA
Sbjct: 406 TDDGWSMLDSDGIDDVTLLVNSSPSKMMGLNLGYNNGFPSVTSSVLCAKASMLLQNVPPA 465

Query: 482 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLE 541
           ILLRFLREHRSEWAD+SIDAYSAAA+KAGPCSLP  R G FGGQVILPLAHTIEHEEF+E
Sbjct: 466 ILLRFLREHRSEWADTSIDAYSAAAIKAGPCSLPGARTGAFGGQVILPLAHTIEHEEFME 525

Query: 542 VIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGF 601
           VIKLENM +YR+DM MP DIFLLQLCSGVDE+AVG  AEL+FAPIDASFSDDAPI+PSGF
Sbjct: 526 VIKLENMGYYRDDMTMPGDIFLLQLCSGVDEHAVGTSAELIFAPIDASFSDDAPILPSGF 585

Query: 602 RIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHL 661
           RIIPL+SG D  SPNRTLDLASALEVG TGNKA GD+S   G TKSV+TIAFQFAFE HL
Sbjct: 586 RIIPLESGTDAASPNRTLDLASALEVGTTGNKAGGDNSGHSGITKSVMTIAFQFAFEAHL 645

Query: 662 QENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCV 721
           Q+N+A+MARQYVR I+ASVQRV+LALSPSRFGS      PPG+PEA TL RWIC SYR  
Sbjct: 646 QDNIAAMARQYVRSIVASVQRVSLALSPSRFGSQNAFPLPPGTPEAQTLTRWICNSYR-- 703

Query: 722 FYF 724
           FY 
Sbjct: 704 FYL 706


>gi|449436888|ref|XP_004136224.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Cucumis
           sativus]
          Length = 842

 Score = 1245 bits (3222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 599/721 (83%), Positives = 653/721 (90%), Gaps = 10/721 (1%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           MMAV+S      +D+  +   +DNGKYVRYTPEQVEALERLY+ECPKPSSMRRQQLIREC
Sbjct: 1   MMAVTSA----CKDAASKMSSLDNGKYVRYTPEQVEALERLYYECPKPSSMRRQQLIREC 56

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           PILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMN+LLMEENDRLQKQVSQLV
Sbjct: 57  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNRLLMEENDRLQKQVSQLV 116

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETL 180
           YEN++FRQQTQNA TLATTDTSCESVVTSGQ +LTP     HPP+DASPAGLLSIAEETL
Sbjct: 117 YENSYFRQQTQNA-TLATTDTSCESVVTSGQQNLTPP----HPPKDASPAGLLSIAEETL 171

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
            EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKD
Sbjct: 172 AEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKD 231

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
            PSW+RDCR+V+V+NVL TG+ GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV
Sbjct: 232 WPSWFRDCRAVDVLNVLSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 291

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSLNNTQNGPSMP   +FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDL+PWSVPEVLR
Sbjct: 292 CERSLNNTQNGPSMPPVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLDPWSVPEVLR 351

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLY+SSTL+AQK TMAALR LRQISQEVSQP+VTGWGRRPAALRALSQ+LSRGFNEA+NG
Sbjct: 352 PLYKSSTLLAQKNTMAALRLLRQISQEVSQPNVTGWGRRPAALRALSQKLSRGFNEAVNG 411

Query: 421 FTDEGWSMLESDGIDDVTVHVNSSPSK-MMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
           FTDEGWS+LE+DG+DDVT+ VN S  K MMG  +SY NGFPSMSNAVLCAKASMLLQ+V 
Sbjct: 412 FTDEGWSLLENDGVDDVTLLVNMSHGKTMMGANISYSNGFPSMSNAVLCAKASMLLQNVT 471

Query: 480 PAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEF 539
           PA+L+RFLREHRSEWADSSIDAYSAAA+K G C LP   AG FGGQVILPLA T+EHEEF
Sbjct: 472 PAMLIRFLREHRSEWADSSIDAYSAAAIKTGQCGLPGSHAGTFGGQVILPLAQTVEHEEF 531

Query: 540 LEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPS 599
           +EV+K EN+ HYR+DM+MP DIFLLQLC+GVDEN VG  AEL+FAPIDASFSDDAPI+PS
Sbjct: 532 MEVVKFENVGHYRDDMLMPGDIFLLQLCNGVDENTVGTSAELIFAPIDASFSDDAPILPS 591

Query: 600 GFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           GFRIIPLDSG D  SPNRTLDLASAL+VGP GN+ASGD + Q G +KSV+TIAFQF F++
Sbjct: 592 GFRIIPLDSGMDASSPNRTLDLASALDVGPAGNRASGDCAGQSGKSKSVMTIAFQFVFDV 651

Query: 660 HLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           HLQ+NVA+MARQYVR IIASVQRVALALSPS FG +A L+ P G+PEA TLARWI QSYR
Sbjct: 652 HLQDNVAAMARQYVRSIIASVQRVALALSPSNFGPHANLQTPAGAPEAQTLARWITQSYR 711

Query: 720 C 720
           C
Sbjct: 712 C 712


>gi|444436435|gb|AGE09585.1| HB1-like protein [Eucalyptus cladocalyx]
          Length = 844

 Score = 1231 bits (3184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 588/701 (83%), Positives = 639/701 (91%), Gaps = 5/701 (0%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           +DNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 19  LDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 78

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQN  TLAT DT
Sbjct: 79  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNT-TLATKDT 137

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 201
           SCESVVTSGQH LT     QHPPRDASPAGLLSIAEETL EFLSKATGTAVEWVQMPGMK
Sbjct: 138 SCESVVTSGQHQLT----SQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMK 193

Query: 202 PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS 261
           PGPDSIGIVAISHGC GVAARACGLVGL+PTRVAEILKDRPSW+RDCR+V+V+NVLPT +
Sbjct: 194 PGPDSIGIVAISHGCAGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTAN 253

Query: 262 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 321
            GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSL NTQNGPSMP    FV
Sbjct: 254 GGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSMPPVQPFV 313

Query: 322 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL 381
           RAEMLPSGYL+RPCEGGGSII IVDH+DLEPWSVPEVLRPLYESST++AQKTTMAALR L
Sbjct: 314 RAEMLPSGYLVRPCEGGGSIIRIVDHLDLEPWSVPEVLRPLYESSTMLAQKTTMAALRQL 373

Query: 382 RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV 441
           RQI+QEVSQP+V+GWGRRPAALRALSQRLSRGFNEALNGFTDEGWS++ +DGIDDVT+ V
Sbjct: 374 RQIAQEVSQPNVSGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSIMGNDGIDDVTILV 433

Query: 442 NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDA 501
           NSSP K+MG+ LS+ NGFP++SNAVLCA+ASMLLQ+VPPA+LLRFLREHRSEWAD+SIDA
Sbjct: 434 NSSPDKLMGLNLSFSNGFPAVSNAVLCARASMLLQNVPPAVLLRFLREHRSEWADNSIDA 493

Query: 502 YSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDI 561
           YSAAAVK G C+LP  R G+FGGQVILPLAHTIEHEEFLEVIKLE M H  ED +MP DI
Sbjct: 494 YSAAAVKVGSCALPGSRIGSFGGQVILPLAHTIEHEEFLEVIKLEGMGHSPEDALMPRDI 553

Query: 562 FLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDL 621
           F LQ+CSGVDENAVG  AEL+FAPIDASF+DDAP++PSGFRIIPLDS K+  SPNRTLDL
Sbjct: 554 FFLQMCSGVDENAVGTFAELIFAPIDASFADDAPLLPSGFRIIPLDSVKEASSPNRTLDL 613

Query: 622 ASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQ 681
           AS+LE+GP GN++  D +   G T+SV+TIAF+FAFE H+QE+VASMARQYVR II+SVQ
Sbjct: 614 ASSLEIGPAGNRSFNDINANSGCTRSVMTIAFEFAFESHMQEHVASMARQYVRSIISSVQ 673

Query: 682 RVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           RVALALSPS  GS+AGLR P G+PEA TLARWIC SYRC  
Sbjct: 674 RVALALSPSNLGSHAGLRTPLGTPEAQTLARWICHSYRCYL 714


>gi|224059140|ref|XP_002299735.1| predicted protein [Populus trichocarpa]
 gi|60327629|gb|AAX19054.1| class III HD-Zip protein 5 [Populus trichocarpa]
 gi|222846993|gb|EEE84540.1| predicted protein [Populus trichocarpa]
          Length = 851

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 593/717 (82%), Positives = 643/717 (89%), Gaps = 19/717 (2%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           G   + MDNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIKVWF
Sbjct: 8   GKNPINMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWF 67

Query: 76  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAAT 135
           QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQN  T
Sbjct: 68  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNT-T 126

Query: 136 LATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV 195
           LA+ DTSCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV
Sbjct: 127 LASKDTSCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV 182

Query: 196 QMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVN 255
           QMPGMKPGPDSIGIVAISHGC+GV ARACGLVGL+PTRVAEILKDRPSW+RDCR+V+V+N
Sbjct: 183 QMPGMKPGPDSIGIVAISHGCSGVGARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLN 242

Query: 256 VLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 315
           VLPT + GTIELLYMQLYAPTTLAP RDFWLLRYTSVLEDGSLVVCERSL NTQNGPSMP
Sbjct: 243 VLPTANGGTIELLYMQLYAPTTLAPGRDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSMP 302

Query: 316 QAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTM 375
              HFVRAEMLPSGYL+RPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQKTTM
Sbjct: 303 PVQHFVRAEMLPSGYLVRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTM 362

Query: 376 AALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID 435
           AALR LRQI+QE SQ SVT WGRRPAALRALSQRLSRGFNEALNGF+DEGWSM+ +DG+D
Sbjct: 363 AALRQLRQIAQEASQSSVTNWGRRPAALRALSQRLSRGFNEALNGFSDEGWSMIGNDGMD 422

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQ-------------DVPPAI 482
           DVT+ VNSSP K+MG+ LS+ NGFP++S+AVLCAKASMLLQ             +VPPAI
Sbjct: 423 DVTILVNSSPDKLMGLNLSFSNGFPAVSSAVLCAKASMLLQAGIQNCFLSLQHLNVPPAI 482

Query: 483 LLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEV 542
           LLRFLREHRSEWAD++IDAY+AAAVK GPCSL   R GNFGGQVILPLAHT+EHEEFLEV
Sbjct: 483 LLRFLREHRSEWADNNIDAYAAAAVKVGPCSLQGSRVGNFGGQVILPLAHTVEHEEFLEV 542

Query: 543 IKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFR 602
           IKLE + H  ED IMP D+FLLQLC G+DENAVG CAEL+FAPIDA+F+DDAP++PSGFR
Sbjct: 543 IKLEGVCHSPEDAIMPRDVFLLQLCCGMDENAVGTCAELIFAPIDATFADDAPLLPSGFR 602

Query: 603 IIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQ 662
           IIPLDSGK+  SPNRTLDLASALEVG  GN+AS D S   G T+SV+TIAF+FAFE H+Q
Sbjct: 603 IIPLDSGKEASSPNRTLDLASALEVG-AGNRASSDFSANSGCTRSVMTIAFEFAFESHMQ 661

Query: 663 ENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           E+VASMARQY+R II+SVQRVALALSPS  GS AGLR P G+PEA TLARWICQSYR
Sbjct: 662 EHVASMARQYIRSIISSVQRVALALSPSHQGSQAGLRSPLGTPEAQTLARWICQSYR 718


>gi|15233969|ref|NP_195014.1| homeobox-leucine zipper protein ATHB-8 [Arabidopsis thaliana]
 gi|75220729|sp|Q39123.1|ATHB8_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-8; AltName:
           Full=HD-ZIP protein ATHB-8; AltName: Full=Homeodomain
           transcription factor ATHB-8
 gi|1149569|emb|CAA90703.1| HD-zip [Arabidopsis thaliana]
 gi|7270235|emb|CAB80005.1| HD-zip transcription factor (athb-8) [Arabidopsis thaliana]
 gi|20152536|emb|CAD29660.1| homeodomain-leucine zipper protein 8 [Arabidopsis thaliana]
 gi|20466330|gb|AAM20482.1| HD-zip transcription factor (athb-8) [Arabidopsis thaliana]
 gi|31711762|gb|AAP68237.1| At4g32880 [Arabidopsis thaliana]
 gi|332660738|gb|AEE86138.1| homeobox-leucine zipper protein ATHB-8 [Arabidopsis thaliana]
          Length = 833

 Score = 1226 bits (3172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/717 (82%), Positives = 652/717 (90%), Gaps = 16/717 (2%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           GGS +S +       MDNGKYVRYTPEQVEALERLY++CPKPSSMRRQQLIRECPILSNI
Sbjct: 3   GGSNNSHN-------MDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNI 55

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF 126
           EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN++F
Sbjct: 56  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSYF 115

Query: 127 RQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSK 186
           RQ  QN   LATTDTSCESVVTSGQHHLTPQ    H PRDASPAGLLSIA+ETLTEF+SK
Sbjct: 116 RQHPQNQGNLATTDTSCESVVTSGQHHLTPQ----HQPRDASPAGLLSIADETLTEFISK 171

Query: 187 ATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR 246
           ATGTAVEWVQMPGMKPGPDSIGIVAISHGCTG+AARACGLVGLDPTRVAEILKD+P W R
Sbjct: 172 ATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGIAARACGLVGLDPTRVAEILKDKPCWLR 231

Query: 247 DCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN 306
           DCRS+++VNVL T + GT+EL+YMQLYAPTTLAPARDFW+LRYTSV+EDGSLV+CERSLN
Sbjct: 232 DCRSLDIVNVLSTANGGTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLN 291

Query: 307 NTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS 366
           NTQNGPSMP +PHFVRAE+LPSGYLIRPCEGGGSI+HIVDH DLEPWSVPEVLR LYESS
Sbjct: 292 NTQNGPSMPPSPHFVRAEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESS 351

Query: 367 TLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW 426
           TL+AQ+TTMAALR+LRQISQE+SQP+VTGWGRRPAALRALSQRLS+GFNEA+NGF+DEGW
Sbjct: 352 TLLAQRTTMAALRYLRQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFSDEGW 411

Query: 427 SMLESDGIDDVTVHVNSSPSKMMGV-QLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLR 485
           S+LESDGIDDVT+ VNSSP+KMM    L + NG+ SM +AVLCAKASMLLQ+VPP+ILLR
Sbjct: 412 SILESDGIDDVTLLVNSSPTKMMMTSSLPFANGYTSMPSAVLCAKASMLLQNVPPSILLR 471

Query: 486 FLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKL 545
           FLREHR EWAD+SIDAYSAAA+KAGPCSLP+PR G+FGGQVILPLAHTIE+EEF+EVIKL
Sbjct: 472 FLREHRQEWADNSIDAYSAAAIKAGPCSLPIPRPGSFGGQVILPLAHTIENEEFMEVIKL 531

Query: 546 ENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
           E++ HY+EDM+MP+DIFLLQ+CSGVDENAV +CAEL+FAPIDASFSDDAPIIPSGFRIIP
Sbjct: 532 ESLGHYQEDMMMPADIFLLQMCSGVDENAVESCAELIFAPIDASFSDDAPIIPSGFRIIP 591

Query: 606 LDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENV 665
           LDS  +  SPNRTLDLASAL+V   G++ +GDS    G++KSV+TIAFQ AFEMH+QENV
Sbjct: 592 LDSKSEGLSPNRTLDLASALDV---GSRTAGDSCGSRGNSKSVMTIAFQLAFEMHMQENV 648

Query: 666 ASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           ASMARQYVR +IASVQRVALALSPS     +GLRPPP SPEAHTLARWI  SYRC  
Sbjct: 649 ASMARQYVRSVIASVQRVALALSPSSH-QLSGLRPPPASPEAHTLARWISHSYRCYL 704


>gi|297798676|ref|XP_002867222.1| ATHB-8 [Arabidopsis lyrata subsp. lyrata]
 gi|297313058|gb|EFH43481.1| ATHB-8 [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score = 1224 bits (3166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 588/717 (82%), Positives = 651/717 (90%), Gaps = 16/717 (2%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           GGS +S +       +DNGKYVRYTPEQVEALERLY++CPKPSSMRRQQLIRECPILSNI
Sbjct: 2   GGSNNSHN-------IDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNI 54

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF 126
           EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN++F
Sbjct: 55  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSYF 114

Query: 127 RQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSK 186
           RQ  QN   LATTD SCESVVTSGQHHLTPQ    H PRDASPAGLLSIA+ETLTEF+SK
Sbjct: 115 RQHPQNQGNLATTDNSCESVVTSGQHHLTPQ----HQPRDASPAGLLSIADETLTEFISK 170

Query: 187 ATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR 246
           ATGTAVEWVQMPGMKPGPDSIGIVAISHGCTG+AARACGLVGLDPTRVAEILKD+P W R
Sbjct: 171 ATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGIAARACGLVGLDPTRVAEILKDKPCWLR 230

Query: 247 DCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN 306
           DCRS+++VNVL T + GT+EL+YMQLYAPTTLAPARDFW+LRYTSV+EDGSLV+CERSLN
Sbjct: 231 DCRSLDIVNVLSTANGGTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLN 290

Query: 307 NTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS 366
           NTQNGPSMP +PHFVRAE+LPSGYLIRPCEGGGSI+HIVDH DLEPWSVPEVLR LYESS
Sbjct: 291 NTQNGPSMPPSPHFVRAEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESS 350

Query: 367 TLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW 426
           TL+AQ+TTMAALR+LRQISQE+SQP+VTGWGRRPAALRALSQRLS+GFNEA+NGF+DEGW
Sbjct: 351 TLLAQRTTMAALRYLRQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFSDEGW 410

Query: 427 SMLESDGIDDVTVHVNSSPSKMMGV-QLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLR 485
           S+LESDGIDDVT+ VNSSP+KMM    L + NGF SM +AVLCAKASMLLQ+VPP+ILLR
Sbjct: 411 SILESDGIDDVTLLVNSSPTKMMMTSSLPFANGFTSMPSAVLCAKASMLLQNVPPSILLR 470

Query: 486 FLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKL 545
           FLREHR EWAD+SIDAYSAAA+KAGPCSLP+PR G+FGGQVILPLAHTIE+EEF+EVIKL
Sbjct: 471 FLREHRQEWADNSIDAYSAAAIKAGPCSLPIPRPGSFGGQVILPLAHTIENEEFMEVIKL 530

Query: 546 ENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
           E++ HY+EDM+MP+DIFLLQ+CSGVDENAV +CAEL+FAPIDASFSDDAPIIPSGFRIIP
Sbjct: 531 ESLGHYQEDMMMPADIFLLQMCSGVDENAVESCAELIFAPIDASFSDDAPIIPSGFRIIP 590

Query: 606 LDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENV 665
           LDS  +  SPNRTLDLASAL+V   G++ +GDS    G++KSV+TIAFQ AFEMH+QENV
Sbjct: 591 LDSKSEGLSPNRTLDLASALDV---GSRTAGDSCGSRGNSKSVMTIAFQLAFEMHMQENV 647

Query: 666 ASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           ASMARQYVR +IASVQRVALALSPS     +GLRPPP SPEAHTLARWI  SYRC  
Sbjct: 648 ASMARQYVRSVIASVQRVALALSPSSH-QLSGLRPPPASPEAHTLARWISHSYRCYL 703


>gi|356526089|ref|XP_003531652.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 838

 Score = 1222 bits (3161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/710 (82%), Positives = 640/710 (90%), Gaps = 5/710 (0%)

Query: 13  RDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 72
           +D     + MDNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIK
Sbjct: 4   KDGSRNGIGMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIK 63

Query: 73  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
           VWFQNRRCREKQRKE+SRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQ 
Sbjct: 64  VWFQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ- 122

Query: 133 AATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAV 192
             T AT DT+CESVVTSGQH+LT Q    HPPRDASPAGLLSIAEETL EFLSKATGTAV
Sbjct: 123 ITTQATKDTNCESVVTSGQHNLTTQ----HPPRDASPAGLLSIAEETLAEFLSKATGTAV 178

Query: 193 EWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVE 252
           EWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKDRP W+RDCR+V+
Sbjct: 179 EWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPLWFRDCRAVD 238

Query: 253 VVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGP 312
           V+NVLPT + GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLV+CERSL NTQNGP
Sbjct: 239 VLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGP 298

Query: 313 SMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQK 372
           SMP   HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQK
Sbjct: 299 SMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 358

Query: 373 TTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESD 432
           TTMAALRHLRQIS EVSQ +VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW+ + +D
Sbjct: 359 TTMAALRHLRQISHEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTTISND 418

Query: 433 GIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRS 492
           G+DDVT+ VNSSP K+MG+ LS+ NGFPS+SNAVLCAKASMLLQ+VPPAILLRFLREHRS
Sbjct: 419 GVDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRS 478

Query: 493 EWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYR 552
           EWAD+++DAY+AAA+K GPCSL     GNFGGQVILPLAHTIEHEEFLEVIKLE +AH  
Sbjct: 479 EWADNNMDAYTAAAIKVGPCSLSGSCVGNFGGQVILPLAHTIEHEEFLEVIKLEGIAHSP 538

Query: 553 EDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDT 612
           ED IMP ++FLLQLCSG+DENAVG CAEL+ APIDASF+DDAP++PSGFRIIPL+SGK+ 
Sbjct: 539 EDTIMPREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPLESGKEA 598

Query: 613 PSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQY 672
            SPNRTLDLAS+L+VGP+GN+AS  S+      +SV+TIAF+FAFE H+QE+V SMARQY
Sbjct: 599 SSPNRTLDLASSLDVGPSGNRASNGSAGNSSCMRSVMTIAFEFAFESHMQEHVTSMARQY 658

Query: 673 VRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           VR II+SVQRVALALSPS   S+AGLR P G+PEA TLA WIC SYRC  
Sbjct: 659 VRSIISSVQRVALALSPSHLSSHAGLRSPLGTPEAQTLAHWICNSYRCYL 708


>gi|357513433|ref|XP_003627005.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
 gi|355521027|gb|AET01481.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
          Length = 832

 Score = 1221 bits (3160), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/706 (82%), Positives = 641/706 (90%), Gaps = 9/706 (1%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           G K +MDNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEP+QIKVWFQ
Sbjct: 6   GNKHLMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPRQIKVWFQ 65

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKE+ RLQ VNRKLTAMNKLLMEENDRLQKQVS LVYEN +FRQ TQNA   
Sbjct: 66  NRRCREKQRKESFRLQGVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRQNTQNA--- 122

Query: 137 ATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 196
            T DTSC+SVVTSGQH++T     QHPPRDASPAGLLSIAEETL EFLSKATGTAVEWVQ
Sbjct: 123 -TKDTSCDSVVTSGQHNMT----SQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQ 177

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKDRP W+RDCR+V++VNV
Sbjct: 178 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPLWFRDCRAVDIVNV 237

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           LPT + GTIELLYMQLYAPTTLAPARDFWLLRYTSV+EDGSLV+CERSL NTQNGPSMP 
Sbjct: 238 LPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVVEDGSLVICERSLKNTQNGPSMPP 297

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
            PHFVRA+MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYES  ++AQKTTMA
Sbjct: 298 VPHFVRADMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESPMVLAQKTTMA 357

Query: 377 ALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
           ALRHLRQIS EVSQP+VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW+M+ +DG+DD
Sbjct: 358 ALRHLRQISHEVSQPNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTMMGNDGVDD 417

Query: 437 VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWAD 496
           VT+ VNSSP K+MG+ LS+ NGFPS+SNAVLCAKASMLLQ+VPPAILLRFLREHRSEWAD
Sbjct: 418 VTILVNSSPDKLMGLNLSFGNGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 477

Query: 497 SSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
            ++DAY+AAA+K GPCSL   R GN+GGQVILPLAHTIEHEEFLEVIKL+ +AH  E+M 
Sbjct: 478 HNMDAYTAAAIKVGPCSLTGSRVGNYGGQVILPLAHTIEHEEFLEVIKLDGVAHSPEEM- 536

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPN 616
           M  ++FLLQLCSG+DENA+G CAEL+FAPIDASF+DDAP++PSGFRIIPL+SGK++ SPN
Sbjct: 537 MARELFLLQLCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLESGKESSSPN 596

Query: 617 RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGI 676
           RTLDLASAL++GPTGN+AS D++   G  +SV+TIAF+FA+E H+QENVA MARQYVR I
Sbjct: 597 RTLDLASALDIGPTGNRASSDNAGNSGCVRSVMTIAFEFAYESHMQENVACMARQYVRSI 656

Query: 677 IASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           I+SVQRVALALSPS   S+AGLR P G+PEA TLA WIC SYRC  
Sbjct: 657 ISSVQRVALALSPSNLSSHAGLRSPLGTPEAQTLAHWICNSYRCYL 702


>gi|224074019|ref|XP_002304217.1| predicted protein [Populus trichocarpa]
 gi|60327631|gb|AAX19055.1| class III HD-Zip protein 6 [Populus trichocarpa]
 gi|222841649|gb|EEE79196.1| predicted protein [Populus trichocarpa]
          Length = 837

 Score = 1221 bits (3159), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/703 (83%), Positives = 637/703 (90%), Gaps = 6/703 (0%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           G++ IMDNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 8   GKQPIMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKEASRLQAVNRKL+AMNKLLMEENDRLQKQVSQLVYEN +FRQ T N   L
Sbjct: 68  NRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYFRQHTHNTP-L 126

Query: 137 ATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 196
           AT DTSCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ
Sbjct: 127 ATKDTSCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 182

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDS GIVAISHGC GV ARACGLVGL+PTRVAEILKDRPSW+RDCR+V+V+NV
Sbjct: 183 MPGMKPGPDSSGIVAISHGCAGVGARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNV 242

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           LPT + GTIELLYMQLYAPTTLAP RDFWLLRYTSVLEDGSLVVCERSL NTQNGPSMP 
Sbjct: 243 LPTANGGTIELLYMQLYAPTTLAPGRDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSMPP 302

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
             HFVRAEMLPSGYL+RPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQKTTM 
Sbjct: 303 VQHFVRAEMLPSGYLVRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMV 362

Query: 377 ALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
           ALR LRQI+QE SQ +VT WGRRPAALRALSQRLSRGFNEALNGF+DEGWSM+ +DG+DD
Sbjct: 363 ALRQLRQIAQEASQSNVTNWGRRPAALRALSQRLSRGFNEALNGFSDEGWSMIGNDGMDD 422

Query: 437 VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWAD 496
           VT+ VNSSP K+MG  LS+ NGFP++S+AVLCAKASMLLQ+VPPAILLRFLREHRSEWAD
Sbjct: 423 VTILVNSSPDKLMGSNLSFTNGFPAVSSAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 482

Query: 497 SSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
           ++IDAY+AAAVK GP SL   R G+FGGQVILPLAHTIEHEEFLEVIKLE + H  ED I
Sbjct: 483 NNIDAYAAAAVKVGPFSLQGSRVGSFGGQVILPLAHTIEHEEFLEVIKLEGVGHSPEDPI 542

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPN 616
           MP D+FLLQLC G+DENAVG CAEL+FAPIDA+F+DDAP++PSGFRIIPLDSGK+  SPN
Sbjct: 543 MPRDVFLLQLCCGMDENAVGTCAELIFAPIDATFADDAPLLPSGFRIIPLDSGKEASSPN 602

Query: 617 RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGI 676
           RTLDLA+ALEVGP GN+AS D S   G T+SV+TIAF+FAFE H+QE+VASM RQY+R I
Sbjct: 603 RTLDLAAALEVGPAGNRASSDHSANSGCTRSVMTIAFEFAFESHMQEHVASMTRQYIRSI 662

Query: 677 IASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           I+SVQRVALALSP   GS AGLR P G+PEA TLARWICQSYR
Sbjct: 663 ISSVQRVALALSP-HLGSQAGLRSPLGTPEAQTLARWICQSYR 704


>gi|357454819|ref|XP_003597690.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
 gi|109729907|tpg|DAA05767.1| TPA_inf: class III HD-Zip protein CNA1 [Medicago truncatula]
 gi|355486738|gb|AES67941.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
          Length = 836

 Score = 1217 bits (3149), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/705 (82%), Positives = 634/705 (89%), Gaps = 6/705 (0%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K +MDNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILS+IEPKQIKVWFQNR
Sbjct: 7   KGVMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSHIEPKQIKVWFQNR 66

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEASRLQAVNRKL+AMNKLLMEENDRLQKQVS LVYEN +FRQ TQN   LAT
Sbjct: 67  RCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYFRQHTQNT-NLAT 125

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
            DTSC+S VTSGQ  LT Q    HPPRDASPAGLLSIAEETL EFLSKATGTAVEWVQMP
Sbjct: 126 KDTSCDSAVTSGQRSLTAQ----HPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMP 181

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGP+SIGI+AISHGC GVAARACGLVGL+PTRVAEILKDRPSWYRDCR+V+++NVLP
Sbjct: 182 GMKPGPESIGIIAISHGCHGVAARACGLVGLEPTRVAEILKDRPSWYRDCRAVDILNVLP 241

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
           T + GTIELLYMQLYAPTTLAPARD WLLRYTSVLEDGSLV+CERSL NTQNGPSMP   
Sbjct: 242 TANGGTIELLYMQLYAPTTLAPARDLWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQ 301

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
           HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQKTTM AL
Sbjct: 302 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTMLAQKTTMVAL 361

Query: 379 RHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
           RHLRQIS EVSQ +VTGWGRRPAALRAL QRLSRGFNEALNGFTDEGWSM+ +DG+DDVT
Sbjct: 362 RHLRQISHEVSQSNVTGWGRRPAALRALGQRLSRGFNEALNGFTDEGWSMIGNDGVDDVT 421

Query: 439 VHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSS 498
           + VNSSP K+MG+ LS+ NGFPS+SNAVLCAKASMLLQ+VPPAILLRFLREHRSEWAD++
Sbjct: 422 ILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNN 481

Query: 499 IDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMP 558
           +DAYSAAA+KAGPCS    R GN+GGQVILPLAHTIEHEEFLEVIKLE +AH  ED IMP
Sbjct: 482 MDAYSAAAIKAGPCSFSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGIAHSPEDAIMP 541

Query: 559 SDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTP-SPNR 617
            ++FLLQLCSG+DENAVG CAEL+FAPIDASF+DDAP++PSGFRIIPLDSGK+   +PNR
Sbjct: 542 REVFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEVANNPNR 601

Query: 618 TLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGII 677
           TLDL SAL++GP GNKAS D S   G  +SV+TIAF+FAFE H+Q++VASMARQYVR II
Sbjct: 602 TLDLTSALDIGPAGNKASNDYSGNSGCMRSVMTIAFEFAFESHMQDHVASMARQYVRSII 661

Query: 678 ASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           +SVQRVALALSPS   S  GLR P G+PEA TLARWI  SYRC  
Sbjct: 662 SSVQRVALALSPSNLNSQGGLRTPLGTPEAQTLARWISNSYRCFL 706


>gi|206572105|gb|ACI13685.1| putative HB15 HD-ZipIII [Malus x domestica]
          Length = 838

 Score = 1216 bits (3146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 583/706 (82%), Positives = 635/706 (89%), Gaps = 5/706 (0%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           G K  +DNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 8   GNKHALDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKEASRLQAVNRKL+AMNKLLMEENDRLQKQVS LVYEN +FRQ TQ   TL
Sbjct: 68  NRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYFRQHTQ-GTTL 126

Query: 137 ATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 196
           AT DTSCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEETL EFLSKATGTAVEWVQ
Sbjct: 127 ATKDTSCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQ 182

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKD PSW RDCR+V+V+NV
Sbjct: 183 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDLPSWLRDCRAVDVLNV 242

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           LPT + GTIELLYMQLYAPTTLAPA DFWLLRYTSVLEDGSLVVC RSL NTQNGP+MP 
Sbjct: 243 LPTANGGTIELLYMQLYAPTTLAPACDFWLLRYTSVLEDGSLVVCARSLKNTQNGPTMPP 302

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
             HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEP SVPEVLRPLYESS ++AQK TMA
Sbjct: 303 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPCSVPEVLRPLYESSAVLAQKMTMA 362

Query: 377 ALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
           ALR LRQI+ EVSQ +VTGWGRRPAALRALSQRLSRGFN+ALNGFTDEGWSM+ +DG+DD
Sbjct: 363 ALRQLRQIAHEVSQSNVTGWGRRPAALRALSQRLSRGFNDALNGFTDEGWSMMGNDGMDD 422

Query: 437 VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWAD 496
           VT+ +NSSP K+MG+ LS+ NGFP++SN+VLCAKASMLLQ+VPPAILLRFLREHRSEWAD
Sbjct: 423 VTILINSSPDKLMGLNLSFGNGFPAVSNSVLCAKASMLLQNVPPAILLRFLREHRSEWAD 482

Query: 497 SSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
           ++IDAYSAAAVK GPCSL   R G+FGGQVILPLAHT+EHEEFLEVIKLE + H  ED +
Sbjct: 483 NNIDAYSAAAVKVGPCSLAGSRVGSFGGQVILPLAHTLEHEEFLEVIKLEGVGHSPEDAM 542

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPN 616
           MP ++FLLQLCSG+DENAVG+CAEL+FAPIDASF+DDAP++PSGFRIIPLD GK+  SPN
Sbjct: 543 MPREMFLLQLCSGMDENAVGSCAELIFAPIDASFADDAPLLPSGFRIIPLDYGKEASSPN 602

Query: 617 RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGI 676
           RTLDLASALE+GPTGNK S + S   G  +SV+TIAF+FA E H+QE+VASMARQYVR I
Sbjct: 603 RTLDLASALEIGPTGNKGSSEYSASAGCVRSVMTIAFEFACETHMQEHVASMARQYVRSI 662

Query: 677 IASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           I+SVQRVALALSPS   S AGLR P G+PEA TLARWIC SYRC  
Sbjct: 663 ISSVQRVALALSPSNLSSQAGLRSPLGTPEAQTLARWICNSYRCYL 708


>gi|356522958|ref|XP_003530109.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 838

 Score = 1214 bits (3141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/711 (82%), Positives = 642/711 (90%), Gaps = 7/711 (0%)

Query: 13  RDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 72
           +D     + MDNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIK
Sbjct: 4   KDGSRNGIGMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIK 63

Query: 73  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
           VWFQNRRCREKQRKE+SRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQ 
Sbjct: 64  VWFQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ- 122

Query: 133 AATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAV 192
             T AT DT+CESVVTSGQ H       QHPPRDASPAGLLSIAEETL EFLSKATGTAV
Sbjct: 123 ITTQATKDTNCESVVTSGQQH---NLITQHPPRDASPAGLLSIAEETLAEFLSKATGTAV 179

Query: 193 EWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVE 252
           EWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKD+P W+RDCR+V+
Sbjct: 180 EWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDQPLWFRDCRAVD 239

Query: 253 VVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGP 312
           V+NVLPT + GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLV+CERSL NTQNGP
Sbjct: 240 VLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGP 299

Query: 313 SMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQK 372
           SMP   HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQK
Sbjct: 300 SMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 359

Query: 373 TTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESD 432
           TTMAALRHLRQIS EVSQ +VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW+ + +D
Sbjct: 360 TTMAALRHLRQISHEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTTIGND 419

Query: 433 GIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRS 492
           G+DDVT+ VNSSP K+MG+ LS+ NGFPS+SNAVLCAKASMLLQ+VPPAILLRFLREHRS
Sbjct: 420 GVDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRS 479

Query: 493 EWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYR 552
           EWAD+++DAY+AAA+K GPCSL   R GN+GGQVILPLAHTIEHEEFLEVIKLE +AH  
Sbjct: 480 EWADNNMDAYTAAAIKVGPCSLSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGIAHSP 539

Query: 553 EDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDT 612
           ED IMP ++FLLQLCSG+DENAVG CAEL+ APIDASF+DDAP++PSGFRIIPL+SGK+ 
Sbjct: 540 EDTIMPREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPLESGKEA 599

Query: 613 PSPNRTLDLASALEVGPTGNKAS-GDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQ 671
            SPNRTLDLASAL+VGP+GN+AS G +++ C   +SV+TIAF+FAFE H+QE+VASMARQ
Sbjct: 600 SSPNRTLDLASALDVGPSGNRASNGCANSSC--MRSVMTIAFEFAFESHMQEHVASMARQ 657

Query: 672 YVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           YVR II+SVQRVALALSPS   S+AGLR P G+PEA TLA WIC SYRC  
Sbjct: 658 YVRSIISSVQRVALALSPSHLSSHAGLRSPLGTPEAQTLAHWICNSYRCYL 708


>gi|449447807|ref|XP_004141659.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Cucumis
           sativus]
 gi|449480641|ref|XP_004155954.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Cucumis
           sativus]
          Length = 837

 Score = 1208 bits (3125), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/706 (81%), Positives = 635/706 (89%), Gaps = 6/706 (0%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           G K  +DNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 8   GNKHGIDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQ + TL
Sbjct: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ-STTL 126

Query: 137 ATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 196
              DTSCE VVTSGQH+LT     QHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ
Sbjct: 127 GAKDTSCEPVVTSGQHNLT----SQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 182

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDSIGIVAISHGC GVAARACGLVGL+PTRVAEILKD+PSW+RDCR+V+V+NV
Sbjct: 183 MPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDQPSWFRDCRAVDVLNV 242

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           LPT + GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLV+CERSL NTQNGP+MP 
Sbjct: 243 LPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPTMPP 302

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
             HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQK TMA
Sbjct: 303 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTMA 362

Query: 377 ALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
           ALR LRQI+ EVSQ +VTGWGRRPAALR+L QRL+RGFNEALNGF DEGWS++ +DG+DD
Sbjct: 363 ALRQLRQIAHEVSQSNVTGWGRRPAALRSLGQRLTRGFNEALNGFNDEGWSVMGNDGMDD 422

Query: 437 VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWAD 496
           VT+ VNSSP K+MG+ +S+ NGF ++SNAVLCA+ASMLLQ+VPPAILLRFLREHRSEWAD
Sbjct: 423 VTILVNSSPDKLMGLNISFANGFSAISNAVLCARASMLLQNVPPAILLRFLREHRSEWAD 482

Query: 497 SSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
           ++IDAYSAAAVK GP SLP  R G+FG QVILPLAHTIEHEEFLEVIKLE + H  ED +
Sbjct: 483 NNIDAYSAAAVKVGPWSLPGSRVGSFGNQVILPLAHTIEHEEFLEVIKLEGIGHTPEDAM 542

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPN 616
           MP ++FLLQLCSG+DENA+G CAEL+FAPIDASF+DDAP++PSGFRIIPLDSGK+  SPN
Sbjct: 543 MPREMFLLQLCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPN 602

Query: 617 RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGI 676
           RTLDLASALE+GP GN+   D S   G T+SV+TIAF+FAFE H+QE+VASMARQYVR I
Sbjct: 603 RTLDLASALEIGPAGNRTPND-SVNSGCTRSVMTIAFEFAFESHMQEHVASMARQYVRSI 661

Query: 677 IASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           I+SVQRVALALSPS   S+ GLR P G+PEA TLARWIC SYRC  
Sbjct: 662 ISSVQRVALALSPSHLSSHTGLRSPLGTPEAQTLARWICNSYRCYL 707


>gi|356522964|ref|XP_003530112.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 841

 Score = 1204 bits (3116), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/712 (80%), Positives = 637/712 (89%), Gaps = 6/712 (0%)

Query: 13  RDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 72
           +D     + MDNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIK
Sbjct: 4   KDGSRNGIGMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIK 63

Query: 73  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQT-Q 131
           VWFQNRRCREKQRKE+SRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ T Q
Sbjct: 64  VWFQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTTQ 123

Query: 132 NAATLATTDTSCESVVTSGQ-HHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGT 190
           N     T DTSCES VTSGQ H+LT Q    HPPRDASPAGLLSIAEETL EFLSKATGT
Sbjct: 124 NTKQQPTKDTSCESAVTSGQQHNLTTQ----HPPRDASPAGLLSIAEETLAEFLSKATGT 179

Query: 191 AVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRS 250
           AVEWVQMPGMKPGPDSIGIVAISH CTGVAARACGLVGL+PTRVAEILKDRP W++DCR+
Sbjct: 180 AVEWVQMPGMKPGPDSIGIVAISHSCTGVAARACGLVGLEPTRVAEILKDRPLWFQDCRA 239

Query: 251 VEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQN 310
           V+V+NVLPT + GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLV+CERSL NTQN
Sbjct: 240 VDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQN 299

Query: 311 GPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIA 370
           GPSMP   HFVRAEMLPSGYLIRPCEGGGSIIHIVDHM+LEPWSVPEVLRPLYESST++A
Sbjct: 300 GPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEPWSVPEVLRPLYESSTVLA 359

Query: 371 QKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
           QKT++ ALRHLRQIS EVSQ +VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW+ + 
Sbjct: 360 QKTSIVALRHLRQISHEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTTIG 419

Query: 431 SDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH 490
           +DG+DDVT+ VNSSP K+MG+ LS+ NGFPS+SNAVLCAKASMLLQ+VPPAILLRFLREH
Sbjct: 420 NDGVDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREH 479

Query: 491 RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAH 550
           RSEWAD+++DAY+AAA+K GPCSL   R GN+GGQVILPLAHTIEHEEFLEVIKLE +AH
Sbjct: 480 RSEWADNNMDAYTAAAIKVGPCSLSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGIAH 539

Query: 551 YREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGK 610
             ED IMP ++FLLQLCSG+DENAVG CAEL+ APIDASF+DDAP++PSGFRIIPL+SGK
Sbjct: 540 SPEDTIMPREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPLESGK 599

Query: 611 DTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMAR 670
           +  SPNRTLDLASAL++G +GN+AS + +      +SV+TIAF+FAFE H+QE+VASMAR
Sbjct: 600 EASSPNRTLDLASALDIGSSGNRASNECAGNSSYMRSVMTIAFEFAFESHMQEHVASMAR 659

Query: 671 QYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           QYVR II+SVQRVALALSPS   S+AGLR P G+PEA TLA WIC SYRC  
Sbjct: 660 QYVRSIISSVQRVALALSPSHLSSHAGLRSPLGTPEAQTLAHWICNSYRCYL 711


>gi|255550932|ref|XP_002516514.1| DNA binding protein, putative [Ricinus communis]
 gi|223544334|gb|EEF45855.1| DNA binding protein, putative [Ricinus communis]
          Length = 782

 Score = 1200 bits (3104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/724 (82%), Positives = 632/724 (87%), Gaps = 51/724 (7%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           MMAV+S   +D    GG K+ MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC
Sbjct: 1   MMAVTSSVCKD----GGSKIAMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 56

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV
Sbjct: 57  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 116

Query: 121 YENTFFRQQTQNAATLATTDT--SCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEE 178
           YEN++FRQQTQNA  LATTDT  SCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEE
Sbjct: 117 YENSYFRQQTQNATNLATTDTNTSCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEE 172

Query: 179 TLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEIL 238
           TL EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGC GVAARACGLVGL+PTRVAEIL
Sbjct: 173 TLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEIL 232

Query: 239 KDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL 298
           KDRPSW+RDCR+V+V+N L TG+ GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL
Sbjct: 233 KDRPSWFRDCRAVDVLNALSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL 292

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
           V+CERSLNNTQNGPSMP   HFVRAEMLPSGYLIRPCEGGGSIIHIVDH+DLE       
Sbjct: 293 VICERSLNNTQNGPSMPPTQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHVDLE------- 345

Query: 359 LRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEAL 418
                             ALRHLRQISQEVSQP+V+GWGRRPAALRALSQRLS+GFNEA+
Sbjct: 346 ------------------ALRHLRQISQEVSQPNVSGWGRRPAALRALSQRLSKGFNEAI 387

Query: 419 NGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDV 478
           NGFTDEG             VH     +KMMG+ +SY +GFP+MSN VLCAKASMLLQ+V
Sbjct: 388 NGFTDEG------------VVHAG---NKMMGLNISYASGFPAMSNGVLCAKASMLLQNV 432

Query: 479 PPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE 538
           PPAILLRFLREHRSEWAD+ IDAY+AAAVKAGPC+LPV RAGNFGGQVILPLAHTIEHEE
Sbjct: 433 PPAILLRFLREHRSEWADTGIDAYAAAAVKAGPCTLPVARAGNFGGQVILPLAHTIEHEE 492

Query: 539 FLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIP 598
           F+EVIKLENM  YREDMIMP DIFLLQLCSGVDENAVG CAELVFAPIDASFSDDAPIIP
Sbjct: 493 FMEVIKLENMG-YREDMIMPGDIFLLQLCSGVDENAVGTCAELVFAPIDASFSDDAPIIP 551

Query: 599 SGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFE 658
           SGFRIIPLDS  D  SPNRTLDLASALEVGP GNKASGD    CGSTKSV+TIAFQFAFE
Sbjct: 552 SGFRIIPLDSKMDVTSPNRTLDLASALEVGPAGNKASGDLPGHCGSTKSVMTIAFQFAFE 611

Query: 659 MHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           +HLQENVASMARQYVR +IASVQRVALALSPSRFGSN  LRPPPG+PEAHTL+ WICQSY
Sbjct: 612 IHLQENVASMARQYVRSVIASVQRVALALSPSRFGSNPSLRPPPGTPEAHTLSSWICQSY 671

Query: 719 RCVF 722
           RC  
Sbjct: 672 RCYL 675


>gi|24417147|dbj|BAC22512.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 836

 Score = 1179 bits (3050), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 572/723 (79%), Positives = 635/723 (87%), Gaps = 18/723 (2%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           MMAV+S    DS       M MDNGKYVRYTPEQVEALERLYH+CPKPSS RRQQLIREC
Sbjct: 1   MMAVTSSCKGDS-------MGMDNGKYVRYTPEQVEALERLYHDCPKPSSHRRQQLIREC 53

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKL+AMNKLLMEENDRLQKQVS LV
Sbjct: 54  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSNLV 113

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETL 180
           YEN+ FRQQTQN A L TTDTSCESVVTSGQHH +PQ    HPPRDASPAGLLSIAEETL
Sbjct: 114 YENSHFRQQTQNMA-LVTTDTSCESVVTSGQHHSSPQ----HPPRDASPAGLLSIAEETL 168

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
           TEFLSKATGTAVEWVQMPGMKPGPDSIGI+AISHGCTGVA+RACGLVGL+PTRVAEILKD
Sbjct: 169 TEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCTGVASRACGLVGLEPTRVAEILKD 228

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSWYRDCR+V+V+NVL TG++ TIELLYMQLYAPTTLAPARDFWLLRYTS LEDGSLVV
Sbjct: 229 RPSWYRDCRAVDVLNVLTTGTNRTIELLYMQLYAPTTLAPARDFWLLRYTSALEDGSLVV 288

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSLNNTQNGP+MP  PHFVRA++LPSGYLIRPC+GGGSIIHIVDH+D E  SVPEVLR
Sbjct: 289 CERSLNNTQNGPTMPPVPHFVRAKILPSGYLIRPCDGGGSIIHIVDHVDFEAGSVPEVLR 348

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESSTL+AQ+TT+AA R LRQISQE+SQP+VT WGRRPAALRAL+QR+SRGFNEA+NG
Sbjct: 349 PLYESSTLLAQRTTLAAFRQLRQISQEISQPAVTSWGRRPAALRALAQRMSRGFNEAING 408

Query: 421 FTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
             DEGW+M+E DG+DDVTV VNSSP K+MG    + +GFPS+S+AVLCAKASMLLQ+VPP
Sbjct: 409 LNDEGWTMMEGDGVDDVTVLVNSSPDKVMGATPMFADGFPSISHAVLCAKASMLLQNVPP 468

Query: 481 AILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFL 540
           AIL RFLREHRSEWADSSID Y+A +VK G C +P+ R+G FGGQVILPLAHTIEHEEF+
Sbjct: 469 AILTRFLREHRSEWADSSIDCYAATSVKGGACGIPLARSGGFGGQVILPLAHTIEHEEFM 528

Query: 541 EVIKLENMAHYR-EDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPS 599
           EVIKLENM+ YR EDM++P DIF LQLC+GVDENA+G  AEL+FAPIDASF+DDAP++PS
Sbjct: 529 EVIKLENMSPYRAEDMLIPGDIFFLQLCNGVDENAIGTSAELIFAPIDASFTDDAPLLPS 588

Query: 600 GFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           GFRIIPL++    P    T DLAS LEVGP G ++  D   Q GSTKSV+TIAFQFAFE+
Sbjct: 589 GFRIIPLNNNSQNP----TRDLASTLEVGPPGKRSPADYLGQSGSTKSVMTIAFQFAFEI 644

Query: 660 HLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           HLQE++A+MARQYVR IIASVQRVALALSPS FG  + L+   G+PEA  LARWICQS+R
Sbjct: 645 HLQESIAAMARQYVRSIIASVQRVALALSPSSFGPRS-LQSASGTPEAQMLARWICQSFR 703

Query: 720 CVF 722
           C  
Sbjct: 704 CFL 706


>gi|356526091|ref|XP_003531653.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 843

 Score = 1176 bits (3043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/716 (78%), Positives = 629/716 (87%), Gaps = 9/716 (1%)

Query: 8   GSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIE 67
           GSR+     G  + MDNGKYVRYTPEQVEALERLYH+CPKPSS+RR QLIRECP LS+I+
Sbjct: 6   GSRN-----GIGIGMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRLQLIRECPTLSHID 60

Query: 68  PKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFR 127
           PKQIKVWFQNRRCREKQRKE+SRLQAVNRKLTAMNKLLMEE DRLQKQVSQLVYEN +FR
Sbjct: 61  PKQIKVWFQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEEIDRLQKQVSQLVYENGYFR 120

Query: 128 QQT-QNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSK 186
           Q T QN    A  DTSCES V SGQ H       QHPPRDASPAGLLSIAEETL EFLSK
Sbjct: 121 QHTTQNTKQQAIKDTSCESAVRSGQQH---NLITQHPPRDASPAGLLSIAEETLEEFLSK 177

Query: 187 ATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR 246
           ATGTAVEWVQMPGMKPGPDSIGIVAISHGC GVAARACGLVGL+PTRVAEILKDRP W+R
Sbjct: 178 ATGTAVEWVQMPGMKPGPDSIGIVAISHGCNGVAARACGLVGLEPTRVAEILKDRPLWFR 237

Query: 247 DCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN 306
           DCR+V+V+NVLPT + GTIELLYMQLYAPTTLAPARDFWLLRYTSVLED SLV+CERSL 
Sbjct: 238 DCRAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDSSLVICERSLK 297

Query: 307 NTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS 366
           NTQNGPSMP   HFVRAEMLPSGYLIRPCEGGGSIIHIVDHM+LEPWSVPEVLRPLYESS
Sbjct: 298 NTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEPWSVPEVLRPLYESS 357

Query: 367 TLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW 426
            +++QKTTMAALRHLRQIS EVS  +V+GWGRRP+ALRALSQRLSRGFNEALNGFTDEGW
Sbjct: 358 KVLSQKTTMAALRHLRQISHEVSPSNVSGWGRRPSALRALSQRLSRGFNEALNGFTDEGW 417

Query: 427 SMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
           + + +DG+DDVT+ VNSSP K+MG+ LS+ NGFPS+SNAVLCAKASMLLQ+V PAILLRF
Sbjct: 418 TTIGNDGVDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVHPAILLRF 477

Query: 487 LREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLE 546
           LREHRSEWAD+++DAY+AAA+K GPCS    R GN+GGQVILPLAHTIEHEEFLEVIKLE
Sbjct: 478 LREHRSEWADNNMDAYTAAAIKVGPCSFSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLE 537

Query: 547 NMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPL 606
            +AH  +D IMP ++FLLQLCSG+DENAVG CAEL+ APIDASF+DDAP++PSGFRIIPL
Sbjct: 538 GVAHSPDDTIMPREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPL 597

Query: 607 DSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVA 666
           +SGK+  SPNRTLDLAS+L+VGP+GN+AS + +      +SV+TIAF+FAFE H+QE+VA
Sbjct: 598 ESGKEASSPNRTLDLASSLDVGPSGNRASDECAGNSSYMRSVMTIAFEFAFESHMQEHVA 657

Query: 667 SMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           +MARQYVR II+SVQRV LALSPS   S+AGLR P G+PEA TLA WIC SYRC  
Sbjct: 658 AMARQYVRSIISSVQRVGLALSPSHLSSHAGLRSPLGTPEAQTLAHWICNSYRCYL 713


>gi|89514865|gb|ABD75307.1| class III homeodomain-leucine zipper protein C3HDZ2 [Ginkgo biloba]
          Length = 843

 Score = 1164 bits (3011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 560/722 (77%), Positives = 630/722 (87%), Gaps = 16/722 (2%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAV++G     +D    K  MD GKYVRYT EQVEALERLYH+CPKPSS+RRQQLIRECP
Sbjct: 1   MAVTAG-----KDG---KAGMDPGKYVRYTAEQVEALERLYHDCPKPSSIRRQQLIRECP 52

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY
Sbjct: 53  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVY 112

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQH---QHPPRDASPAGLLSIAEE 178
           EN +FRQQ QNA ++ATTDTSCESVVTSGQH    QQ H   +HPPRDASPAGLLSIAEE
Sbjct: 113 ENGYFRQQLQNA-SIATTDTSCESVVTSGQHQ---QQNHLTARHPPRDASPAGLLSIAEE 168

Query: 179 TLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEIL 238
           TLTEFLSKATGTAVEW+QMPGMKPGPDSIGIVAISHGCTGVAARACGLVG++PT+VAEIL
Sbjct: 169 TLTEFLSKATGTAVEWIQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGIEPTKVAEIL 228

Query: 239 KDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL 298
           KDRPSW+RDCR V+V+    TG+ GT+ELLYMQ+YAPTTLA ARDFW LRYTSVLEDGSL
Sbjct: 229 KDRPSWFRDCRCVDVLTAFSTGNGGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSL 288

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
           VVCERSL+ TQ GPSMP   HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV
Sbjct: 289 VVCERSLSGTQGGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 348

Query: 359 LRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEAL 418
           LRPLYESST++AQK TMAALRHLRQI+QEVS   V GWGR+PAALR  SQRL +GFNEA+
Sbjct: 349 LRPLYESSTVLAQKMTMAALRHLRQIAQEVSCDVVLGWGRQPAALRTFSQRLGKGFNEAV 408

Query: 419 NGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDV 478
           NGFTD+GWS++ +DG DDVT+ +NSSP+K++G QL+   GFP++   +LCAKASMLLQ+V
Sbjct: 409 NGFTDDGWSLMGNDGTDDVTILINSSPNKILGSQLASSEGFPALGGGILCAKASMLLQNV 468

Query: 479 PPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHE 537
           PPA+L+RFLREHRSEWADS+IDAYSAAA+KA PCS+P  R G F GGQVILPLAHT+EHE
Sbjct: 469 PPALLVRFLREHRSEWADSNIDAYSAAALKASPCSVPSSRIGGFGGGQVILPLAHTVEHE 528

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPII 597
           EFLEVIKLE     +E+ ++  ++FLLQLCSGVDENAVG CAELVFAPIDASF+D+AP++
Sbjct: 529 EFLEVIKLEGNGLTQEEALLSREMFLLQLCSGVDENAVGACAELVFAPIDASFADNAPLL 588

Query: 598 PSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAF 657
           PSGFR+IPLDSG D  SPNRTLDLASALE+GP G + SGD     G+ +SV+TIAFQF +
Sbjct: 589 PSGFRVIPLDSGVDGSSPNRTLDLASALEIGPAGTRVSGDYGGNSGNLRSVLTIAFQFTY 648

Query: 658 EMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQS 717
           E HL+ENVASMARQYVR ++ASVQRVA+AL+PSR  S+ G RPPPG+PEA TLARWIC S
Sbjct: 649 ENHLRENVASMARQYVRSVVASVQRVAMALAPSRLSSHLGPRPPPGTPEALTLARWICHS 708

Query: 718 YR 719
           YR
Sbjct: 709 YR 710


>gi|145324911|ref|NP_001077702.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|332194641|gb|AEE32762.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 794

 Score = 1160 bits (3001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/705 (79%), Positives = 619/705 (87%), Gaps = 11/705 (1%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           G+   +DNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 8   GKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN++FRQ T N  +L
Sbjct: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNP-SL 126

Query: 137 ATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 196
              DTSCESVVTSGQH L      Q+P RDASPAGLLSIAEETL EFLSKATGTAVEWVQ
Sbjct: 127 PAKDTSCESVVTSGQHQLA----SQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWVQ 182

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDSIGI+AISHGCTGVAARACGLVGL+PTRVAEI+KDRPSW+R+CR+VEV+NV
Sbjct: 183 MPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVMNV 242

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           LPT + GT+ELLYMQLYAPTTLAP RDFWLLRYTSVLEDGSLVVCERSL +TQNGPSMP 
Sbjct: 243 LPTANGGTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPL 302

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
             +FVRAEML SGYLIRPC+GGGSIIHIVDHMDLE  SVPEVLRPLYES  ++AQKTTMA
Sbjct: 303 VQNFVRAEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMA 362

Query: 377 ALRHLRQISQEVSQ--PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           ALR L+QI+QEV+Q   SV GWGRRPAALRALSQRLSRGFNEA+NGFTDEGWS++  D +
Sbjct: 363 ALRQLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GDSM 421

Query: 435 DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEW 494
           DDVT+ VNSSP K+MG+ L++ NGF  +SN VLCAKASMLLQ+VPPAILLRFLREHRSEW
Sbjct: 422 DDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEW 481

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           AD++IDAY AAAVK GPCS    R G FGGQVILPLAHTIEHEEF+EVIKLE + H  ED
Sbjct: 482 ADNNIDAYLAAAVKVGPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPED 538

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPS 614
            I+P DIFLLQLCSG+DENAVG CAEL+FAPIDASF+DDAP++PSGFRIIPLDS K+  S
Sbjct: 539 AIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEVSS 598

Query: 615 PNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVR 674
           PNRTLDLASALE+G  G KAS D S      +SV+TIAF+F  E H+QE+VASMARQYVR
Sbjct: 599 PNRTLDLASALEIGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYVR 658

Query: 675 GIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           GII+SVQRVALALSPS   S  GLR P G+PEA TLARWICQSYR
Sbjct: 659 GIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYR 703


>gi|15218158|ref|NP_175627.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|75216693|sp|Q9ZU11.1|ATB15_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-15; AltName:
           Full=HD-ZIP protein ATHB-15; AltName: Full=Homeodomain
           transcription factor ATHB-15; AltName: Full=Protein
           CORONA; AltName: Full=Protein INCURVATA 4
 gi|4220462|gb|AAD12689.1| Strong similarity to gb|Z50851 HD-zip (athb-8) gene from
           Arabidopsis thaliana containing Homeobox PF|00046 and
           bZIP PF|00170 domains [Arabidopsis thaliana]
 gi|16974581|gb|AAL31186.1| At1g52150/F5F19_21 [Arabidopsis thaliana]
 gi|19578319|emb|CAD28400.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|332194639|gb|AEE32760.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 836

 Score = 1159 bits (2997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/705 (79%), Positives = 619/705 (87%), Gaps = 11/705 (1%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           G+   +DNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 8   GKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN++FRQ T N  +L
Sbjct: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNP-SL 126

Query: 137 ATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 196
              DTSCESVVTSGQH L      Q+P RDASPAGLLSIAEETL EFLSKATGTAVEWVQ
Sbjct: 127 PAKDTSCESVVTSGQHQLA----SQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWVQ 182

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDSIGI+AISHGCTGVAARACGLVGL+PTRVAEI+KDRPSW+R+CR+VEV+NV
Sbjct: 183 MPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVMNV 242

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           LPT + GT+ELLYMQLYAPTTLAP RDFWLLRYTSVLEDGSLVVCERSL +TQNGPSMP 
Sbjct: 243 LPTANGGTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPL 302

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
             +FVRAEML SGYLIRPC+GGGSIIHIVDHMDLE  SVPEVLRPLYES  ++AQKTTMA
Sbjct: 303 VQNFVRAEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMA 362

Query: 377 ALRHLRQISQEVSQ--PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           ALR L+QI+QEV+Q   SV GWGRRPAALRALSQRLSRGFNEA+NGFTDEGWS++  D +
Sbjct: 363 ALRQLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GDSM 421

Query: 435 DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEW 494
           DDVT+ VNSSP K+MG+ L++ NGF  +SN VLCAKASMLLQ+VPPAILLRFLREHRSEW
Sbjct: 422 DDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEW 481

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           AD++IDAY AAAVK GPCS    R G FGGQVILPLAHTIEHEEF+EVIKLE + H  ED
Sbjct: 482 ADNNIDAYLAAAVKVGPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPED 538

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPS 614
            I+P DIFLLQLCSG+DENAVG CAEL+FAPIDASF+DDAP++PSGFRIIPLDS K+  S
Sbjct: 539 AIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEVSS 598

Query: 615 PNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVR 674
           PNRTLDLASALE+G  G KAS D S      +SV+TIAF+F  E H+QE+VASMARQYVR
Sbjct: 599 PNRTLDLASALEIGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYVR 658

Query: 675 GIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           GII+SVQRVALALSPS   S  GLR P G+PEA TLARWICQSYR
Sbjct: 659 GIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYR 703


>gi|297852954|ref|XP_002894358.1| ATHB-15 [Arabidopsis lyrata subsp. lyrata]
 gi|297340200|gb|EFH70617.1| ATHB-15 [Arabidopsis lyrata subsp. lyrata]
          Length = 837

 Score = 1158 bits (2996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/706 (80%), Positives = 620/706 (87%), Gaps = 12/706 (1%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           G+   +DNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 8   GKLGCLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN++FRQ T N  +L
Sbjct: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNP-SL 126

Query: 137 ATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 196
              DTSCESVVTSGQH L      Q+P RDASPAGLLSIAEETL EFLSKATGTAVEWVQ
Sbjct: 127 PAKDTSCESVVTSGQHQLA----SQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWVQ 182

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDSIGI+AISHGCTGVAARACGLVGL+PTRVAEI+KDRPSW+R+CR+V+V+NV
Sbjct: 183 MPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVDVMNV 242

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           LPT + GTIELLYMQLYAPTTLAP RDFWLLRYTSVLEDGSLVVCERSL +TQNGPSMP 
Sbjct: 243 LPTANGGTIELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPL 302

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
             +FVRAEMLPSGYLIRPC+GGGSIIHIVDHMDLE  SVPEVLRPLYES  ++AQKTTMA
Sbjct: 303 VQNFVRAEMLPSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMA 362

Query: 377 ALRHLRQISQEVSQ--PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           ALR L+QI+QEV+Q   SV GWGRRPAALRALSQRLSRGFNEA+NGFTDEGWS++  D +
Sbjct: 363 ALRQLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GDSM 421

Query: 435 DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEW 494
           DDVT+ VNSSP K+MG+ L++ NGF  +SN VLCAKASMLLQ+VPPAILLRFLREHRSEW
Sbjct: 422 DDVTITVNSSPDKLMGINLTFSNGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEW 481

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           AD++IDAY AAAVK GPCS    R G FGGQVILPLAHTIEHEEF+EVIKLE + H  ED
Sbjct: 482 ADNNIDAYLAAAVKVGPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPED 538

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGK-DTP 613
            I+P DIFLLQLCSG+DENAVG CAEL+FAPIDASF+DDAP++PSGFRIIPLDS K +  
Sbjct: 539 AIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKQEVS 598

Query: 614 SPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYV 673
           SPNRTLDLASALE+G  G KAS D S      +SV+TIAF+F  E H+QE+VASMARQYV
Sbjct: 599 SPNRTLDLASALEIGSAGTKASADQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYV 658

Query: 674 RGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           RGII+SVQRVALALSPS   S  GLR P G+PEA TLARWICQSYR
Sbjct: 659 RGIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYR 704


>gi|59709573|gb|AAW88440.1| CORONA [Arabidopsis thaliana]
          Length = 836

 Score = 1157 bits (2993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/705 (79%), Positives = 620/705 (87%), Gaps = 11/705 (1%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           G+   +DNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 8   GKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN++FRQ T N  +L
Sbjct: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNP-SL 126

Query: 137 ATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 196
              DTSCESVVTSGQH L      Q+P RDASPAGLLSIAEETL EFLSKATGTAVEW+Q
Sbjct: 127 PAKDTSCESVVTSGQHQLA----SQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWIQ 182

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDSIGI+AISHGCTGVAARACGLVGL+PTRVAEI+KDRPSW+R+CR+V+V+NV
Sbjct: 183 MPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVDVMNV 242

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           LPT + GT+ELLYMQLYAPTTLAP RDFWLLRYTSVLEDGSLVVCERSL +TQNGPSMP 
Sbjct: 243 LPTANGGTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPL 302

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
             +FVRAEML SGYLIRPC+GGGSIIHIVDHMDLE  SVPEVLRPLYES  ++AQKTTMA
Sbjct: 303 VQNFVRAEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMA 362

Query: 377 ALRHLRQISQEVSQ--PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           ALR L+QI+QEV+Q   SV GWGRRPAALRALSQRLSRGFNEA+NGFTDEGWS++  D +
Sbjct: 363 ALRQLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GDSM 421

Query: 435 DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEW 494
           DDVT+ VNSSP K+MG+ L++ NGF  +SN VLCAKASMLLQ+VPPAILLRFLREHRSEW
Sbjct: 422 DDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEW 481

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           AD++IDAY AAAVK GPCS    R G FGGQVILPLAHTIEHEEF+EVIKLE + H  ED
Sbjct: 482 ADNNIDAYLAAAVKVGPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPED 538

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPS 614
            I+P DIFLLQLCSG+DENAVG CAEL+FAPIDASF+DDAP++PSGFRIIPLDS K+  S
Sbjct: 539 AIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEVSS 598

Query: 615 PNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVR 674
           PNRTLDLASALE+G  G KAS D S     T+SV+TIAF+F  E H+QE+VASMARQYVR
Sbjct: 599 PNRTLDLASALEIGSAGTKASTDLSGNSTCTRSVMTIAFEFGIESHMQEHVASMARQYVR 658

Query: 675 GIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           GII+SVQRVALALSPS   S  GLR P G+PEA TLARWICQSYR
Sbjct: 659 GIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYR 703


>gi|30695149|ref|NP_849795.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|332194640|gb|AEE32761.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 837

 Score = 1154 bits (2984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/706 (79%), Positives = 619/706 (87%), Gaps = 12/706 (1%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           G+   +DNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 8   GKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN++FRQ T N  +L
Sbjct: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNP-SL 126

Query: 137 ATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 196
              DTSCESVVTSGQH L      Q+P RDASPAGLLSIAEETL EFLSKATGTAVEWVQ
Sbjct: 127 PAKDTSCESVVTSGQHQLA----SQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWVQ 182

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDSIGI+AISHGCTGVAARACGLVGL+PTRVAEI+KDRPSW+R+CR+VEV+NV
Sbjct: 183 MPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVMNV 242

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           LPT + GT+ELLYMQLYAPTTLAP RDFWLLRYTSVLEDGSLVVCERSL +TQNGPSMP 
Sbjct: 243 LPTANGGTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPL 302

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
             +FVRAEML SGYLIRPC+GGGSIIHIVDHMDLE  SVPEVLRPLYES  ++AQKTTMA
Sbjct: 303 VQNFVRAEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMA 362

Query: 377 ALRHLRQISQEVSQ--PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           ALR L+QI+QEV+Q   SV GWGRRPAALRALSQRLSRGFNEA+NGFTDEGWS++  D +
Sbjct: 363 ALRQLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GDSM 421

Query: 435 DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEW 494
           DDVT+ VNSSP K+MG+ L++ NGF  +SN VLCAKASMLLQ+VPPAILLRFLREHRSEW
Sbjct: 422 DDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEW 481

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           AD++IDAY AAAVK GPCS    R G FGGQVILPLAHTIEHEEF+EVIKLE + H  ED
Sbjct: 482 ADNNIDAYLAAAVKVGPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPED 538

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGK-DTP 613
            I+P DIFLLQLCSG+DENAVG CAEL+FAPIDASF+DDAP++PSGFRIIPLDS K +  
Sbjct: 539 AIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKQEVS 598

Query: 614 SPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYV 673
           SPNRTLDLASALE+G  G KAS D S      +SV+TIAF+F  E H+QE+VASMARQYV
Sbjct: 599 SPNRTLDLASALEIGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYV 658

Query: 674 RGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           RGII+SVQRVALALSPS   S  GLR P G+PEA TLARWICQSYR
Sbjct: 659 RGIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYR 704


>gi|38198211|dbj|BAD01502.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 838

 Score = 1152 bits (2981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 566/709 (79%), Positives = 620/709 (87%), Gaps = 10/709 (1%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           GG+  IMDNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQIKVWF
Sbjct: 8   GGKCTIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 67

Query: 76  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAAT 135
           QNRRCREKQRKEASRLQ+VNRKLTAMNKLLMEENDRLQKQVS LVYEN  FRQ TQN A 
Sbjct: 68  QNRRCREKQRKEASRLQSVNRKLTAMNKLLMEENDRLQKQVSHLVYENGCFRQHTQNGA- 126

Query: 136 LATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV 195
           LAT DTSCESVVTSGQ HLTPQ    HPP DASPAGLLSIAEETLTEFLSKATGTAVEWV
Sbjct: 127 LATKDTSCESVVTSGQRHLTPQ----HPPGDASPAGLLSIAEETLTEFLSKATGTAVEWV 182

Query: 196 QMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVN 255
           QMPGMKPGPDSIGIV+ISHGCTGVAARACGLV L+PTRVAEILKDR SWYRDCR+V+V++
Sbjct: 183 QMPGMKPGPDSIGIVSISHGCTGVAARACGLVSLEPTRVAEILKDRTSWYRDCRAVDVLD 242

Query: 256 VLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 315
           VLPT + GTIELLYMQLYAPTTLA  RDF LLRYTSV+EDGSLVVCERSL NT NG S+P
Sbjct: 243 VLPTANGGTIELLYMQLYAPTTLATGRDFLLLRYTSVIEDGSLVVCERSLANTPNGQSIP 302

Query: 316 QAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTM 375
             P+FVRAEMLPSGYLIRPCEGGGSIIHIVDHM+LE WSVPEVLRPLYESST+IAQKTTM
Sbjct: 303 SVPNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEAWSVPEVLRPLYESSTVIAQKTTM 362

Query: 376 AALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID 435
            ALR LRQI+QEVSQ +   WGRRPAALRALSQRLSRGFNEA+NGFTDEGWS+  +DG+D
Sbjct: 363 MALRQLRQIAQEVSQTNTPNWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSLTSNDGMD 422

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLL-QDVPPAILLRFLREHRSEW 494
           DVT+HVNSSP K+MG+ LS+ NG+PS++ AVLCAKASMLL  +VPPA+LLRFLREHRSEW
Sbjct: 423 DVTIHVNSSPEKLMGLNLSFSNGYPSLNTAVLCAKASMLLPPNVPPALLLRFLREHRSEW 482

Query: 495 AD-SSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRE 553
           AD +++DAYSAAAVK GPCSL   RAGNFGGQVILPLA TIEHEE LEVIKLE +    E
Sbjct: 483 ADNNNVDAYSAAAVKLGPCSLLGTRAGNFGGQVILPLAQTIEHEELLEVIKLEGVGLCPE 542

Query: 554 DMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTP 613
           D +M  D+F LQLCSG+DENAVG C+EL+FAPIDASF+DDAP++PSGFRI+PLDS K   
Sbjct: 543 DALMGRDMFFLQLCSGIDENAVGMCSELIFAPIDASFADDAPLLPSGFRIMPLDSCKGDS 602

Query: 614 SPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYV 673
           SPNRTLDLASALEV    NKA+GD +      +SV+TIA +FAFE H+QE+VA+MARQYV
Sbjct: 603 SPNRTLDLASALEVRGAANKAAGDRNVGNSCARSVMTIALEFAFESHMQESVAAMARQYV 662

Query: 674 RGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           R II+SVQRVA ALSPS    N GL+ P G+PEAHTLARWI  SYRC  
Sbjct: 663 RSIISSVQRVASALSPS---PNGGLQSPLGTPEAHTLARWISHSYRCYL 708


>gi|18076738|emb|CAC84276.1| HD-Zip protein [Zinnia violacea]
          Length = 838

 Score = 1150 bits (2974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 566/709 (79%), Positives = 620/709 (87%), Gaps = 10/709 (1%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           GG+  IMDNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQIKVWF
Sbjct: 8   GGKCTIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 67

Query: 76  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAAT 135
           QNRRCREKQRKEASRLQ+VNRKLTAMNKLLMEENDRLQKQVS LVYEN  FRQ TQN A 
Sbjct: 68  QNRRCREKQRKEASRLQSVNRKLTAMNKLLMEENDRLQKQVSHLVYENGCFRQHTQNGA- 126

Query: 136 LATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV 195
           LAT DTSCESVVTSGQ HLTPQ    HPP DASPAGLLSIAEETLTEFLSKATGTAVEWV
Sbjct: 127 LATKDTSCESVVTSGQRHLTPQ----HPPGDASPAGLLSIAEETLTEFLSKATGTAVEWV 182

Query: 196 QMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVN 255
           QMPGMKPGPDSIGIV+ISHGCTGVAARACGLV L+PTRVAEILKDR SWYRDCR+V+V++
Sbjct: 183 QMPGMKPGPDSIGIVSISHGCTGVAARACGLVSLEPTRVAEILKDRTSWYRDCRAVDVLD 242

Query: 256 VLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 315
           VLPT + GTIELLYMQLYAPTTLA  RDF LLRYTSV+EDGSLVVCERSL NT NG S+P
Sbjct: 243 VLPTANGGTIELLYMQLYAPTTLATGRDFLLLRYTSVIEDGSLVVCERSLANTPNGQSIP 302

Query: 316 QAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTM 375
             P+FVRAEMLPSGYLIRPCEGGGSIIHIVDHM+LE WSVPEVLRPLYESST+IAQKTTM
Sbjct: 303 SVPNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEAWSVPEVLRPLYESSTVIAQKTTM 362

Query: 376 AALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID 435
            ALR LRQI+QEVSQ +   WGRRPAALRALSQRLSRGFNEA+NGFTDEGWS+  +DG+D
Sbjct: 363 MALRQLRQIAQEVSQTNTPNWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSLTSNDGMD 422

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLL-QDVPPAILLRFLREHRSEW 494
           DVT+HVNSSP K+MG+ LS+ NG+PS++ AVLCAKASMLL  +VPPA+LLRFLREHRSEW
Sbjct: 423 DVTIHVNSSPEKLMGLNLSFSNGYPSLNTAVLCAKASMLLPPNVPPALLLRFLREHRSEW 482

Query: 495 AD-SSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRE 553
           AD +++DAYSAAAVK GPCSL   RAGNFGGQVILPLA TIEHEE LEVIKLE +    E
Sbjct: 483 ADNNNVDAYSAAAVKLGPCSLLGTRAGNFGGQVILPLAQTIEHEELLEVIKLEGVGLCPE 542

Query: 554 DMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTP 613
           D +M  D+F LQLCSG+DENAVG C+EL+FAPIDASF+DDAP++PSGFRI+PLDS K   
Sbjct: 543 DALMGRDMFFLQLCSGIDENAVGMCSELIFAPIDASFADDAPLLPSGFRIMPLDSCKGDS 602

Query: 614 SPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYV 673
           SPNRTLDLASALEV    NKA+GD +      +SV+TIA +FAFE H+QE+VA+MARQYV
Sbjct: 603 SPNRTLDLASALEVRGAANKAAGDRNVGNSCARSVMTIALEFAFESHMQESVAAMARQYV 662

Query: 674 RGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           R II+SVQRVA ALSPS    N GL+ P G+PEAHTLARWI  SYRC  
Sbjct: 663 RSIISSVQRVASALSPS---PNGGLQSPLGTPEAHTLARWISHSYRCYL 708


>gi|147792360|emb|CAN65768.1| hypothetical protein VITISV_018803 [Vitis vinifera]
          Length = 868

 Score = 1147 bits (2967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/744 (77%), Positives = 622/744 (83%), Gaps = 53/744 (7%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K IMDNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 9   KGIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 68

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQN  TLAT
Sbjct: 69  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNT-TLAT 127

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
            DTSCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP
Sbjct: 128 KDTSCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 183

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKDRPSW+RDCR+V+V+NVLP
Sbjct: 184 GMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLP 243

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
           T + GTIELLYMQLYAPTTLAPARDFWL+  T     G    CE S + T       +  
Sbjct: 244 TANGGTIELLYMQLYAPTTLAPARDFWLV--TLYFCYGGWKSCEWSKHATSAAFCESR-- 299

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
               A   P+   IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQKTTMAAL
Sbjct: 300 ---NAAKWPT--CIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL 354

Query: 379 RHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
           R LRQI+QEVSQ +VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM+ +DGIDDVT
Sbjct: 355 RQLRQIAQEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGIDDVT 414

Query: 439 VHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLL----------------------- 475
           + VNSSP K+ G+ LS+ NGFP++SNAVLCAKASMLL                       
Sbjct: 415 ILVNSSPEKLTGLNLSFANGFPAVSNAVLCAKASMLLQVKEEVHNLLTWGNQHLSLFHLL 474

Query: 476 ----------QDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQ 525
                     Q+VPPAILLRFLREHRSEWAD++IDAYSAAAVK GPCSLP  R G+FG Q
Sbjct: 475 VEFTSLFLIQQNVPPAILLRFLREHRSEWADNNIDAYSAAAVKVGPCSLPGSRVGSFGSQ 534

Query: 526 VILPLAHTIEHEE------FLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCA 579
           VILPLAHTIEHEE      FLEVIKLE + H  ED +MP D+FLLQLCSG+DENAVG CA
Sbjct: 535 VILPLAHTIEHEEASNLFIFLEVIKLEGVGHCPEDAMMPRDMFLLQLCSGMDENAVGTCA 594

Query: 580 ELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSS 639
           EL+FAPIDASF+DDAP++PSGFRIIPLDSGK+  SPNRTLDLASALE+GP GN++S D S
Sbjct: 595 ELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPNRTLDLASALEIGPAGNRSSNDYS 654

Query: 640 TQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLR 699
              G+T+SV+TIAF+FAFE HLQENVASMARQYVR II+SVQRVALALSPS   S+AGLR
Sbjct: 655 VNGGNTRSVMTIAFEFAFESHLQENVASMARQYVRSIISSVQRVALALSPSHLSSHAGLR 714

Query: 700 PPPGSPEAHTLARWICQSYRCVFY 723
           PP G+PEAHTLARWI  SYRC  +
Sbjct: 715 PPLGTPEAHTLARWISHSYRCATW 738


>gi|89514875|gb|ABD75312.1| class III homeodomain-leucine zipper protein C3HDZ2 [Taxus globosa]
          Length = 843

 Score = 1140 bits (2948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/723 (75%), Positives = 624/723 (86%), Gaps = 18/723 (2%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAV+ G        GG    MD GKYVRYT EQVEALERLY +CPKPSS+RRQQLIRECP
Sbjct: 1   MAVTCG----KEGKGG----MDPGKYVRYTAEQVEALERLYRDCPKPSSIRRQQLIRECP 52

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY
Sbjct: 53  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVY 112

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQH----HLTPQQQHQHPPRDASPAGLLSIAE 177
           EN +FRQQ QNA+   T + SCESVVTSGQH    HLTP+Q    PPRDASPAGLLSIAE
Sbjct: 113 ENGYFRQQLQNASIATTDNNSCESVVTSGQHQQQNHLTPRQ----PPRDASPAGLLSIAE 168

Query: 178 ETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEI 237
           ETLTEFLSKATGTAVEW+QMPGMKPGPD+IGIVAISHGCTGVAARACGLVGL+PT+VAEI
Sbjct: 169 ETLTEFLSKATGTAVEWIQMPGMKPGPDAIGIVAISHGCTGVAARACGLVGLEPTKVAEI 228

Query: 238 LKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGS 297
           LKDRPSW+RDCRSV+V+    TG+ GT+E+LYMQ+YAPTTLAPARDF  LRYTSV+EDGS
Sbjct: 229 LKDRPSWFRDCRSVDVLTAFSTGNGGTVEILYMQMYAPTTLAPARDFCTLRYTSVMEDGS 288

Query: 298 LVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPE 357
           LVVCERSL++ +  PSMP  PHFVRAEM PSGYLIRPCEGG SIIHIVDHMDLEPWSVPE
Sbjct: 289 LVVCERSLSD-KGSPSMPPVPHFVRAEMFPSGYLIRPCEGGSSIIHIVDHMDLEPWSVPE 347

Query: 358 VLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEA 417
           VLRPLYESS ++AQ+TTMAALR LRQ++QEVS   V GWGR+PAALR  SQRL +GFNEA
Sbjct: 348 VLRPLYESSAVLAQRTTMAALRRLRQVAQEVSSDMVLGWGRQPAALRMFSQRLCKGFNEA 407

Query: 418 LNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQD 477
           +NGFTD+GWS++ SDG+DDVT+ +NSSPSK++G QL+  +G P+    +LCAKASMLLQ+
Sbjct: 408 INGFTDDGWSLMGSDGMDDVTILINSSPSKLLGSQLASTDGLPAFGGGILCAKASMLLQN 467

Query: 478 VPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEH 536
           VPP++L+RFLREHRSEWADS+IDAYSAAA+KA PC++P  R G F GGQVILPLAHT+EH
Sbjct: 468 VPPSLLVRFLREHRSEWADSNIDAYSAAALKASPCAVPTSRIGGFGGGQVILPLAHTVEH 527

Query: 537 EEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPI 596
           EEFLEVIKLE     +E+ ++  D+FLLQLCSG+DENAVG CAELVFAPIDAS +D AP+
Sbjct: 528 EEFLEVIKLECNGLTQEEALLSRDMFLLQLCSGIDENAVGACAELVFAPIDASLTDSAPL 587

Query: 597 IPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFA 656
           +PSGFR+IPLDSG D+ SPNRTLDLASAL+VGPTGN+ +GD      + +SV+TIAFQF 
Sbjct: 588 LPSGFRVIPLDSGIDSSSPNRTLDLASALDVGPTGNRPAGDYGGNSSNIRSVLTIAFQFT 647

Query: 657 FEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQ 716
           +E HL+ENVASMARQYVR ++ASVQRVA+AL+PSR GS+ G RPPPG+PEA TLARWICQ
Sbjct: 648 YENHLRENVASMARQYVRNVVASVQRVAMALAPSRLGSHLGPRPPPGTPEALTLARWICQ 707

Query: 717 SYR 719
           SYR
Sbjct: 708 SYR 710


>gi|110349542|gb|ABG73246.1| class III HD-Zip protein HDZ32 [Pinus taeda]
          Length = 844

 Score = 1135 bits (2935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/723 (75%), Positives = 619/723 (85%), Gaps = 17/723 (2%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAV+SG         G+   MD GKYVRYT EQVEALERLYH+CPKPSS+RRQQLIRECP
Sbjct: 1   MAVTSGKE-------GKSSSMDQGKYVRYTAEQVEALERLYHDCPKPSSIRRQQLIRECP 53

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKL+AMNKLLMEENDRLQKQVSQLVY
Sbjct: 54  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSQLVY 113

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQH----HLTPQQQHQHPPRDASPAGLLSIAE 177
           EN +FRQQ QNA ++ATTDTSCESVVTS +H    HLTP+     PPRDASPAGLLSIAE
Sbjct: 114 ENGYFRQQLQNA-SIATTDTSCESVVTSVKHQQQNHLTPRD----PPRDASPAGLLSIAE 168

Query: 178 ETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEI 237
           ETLTEFLSKA G AVEW+QMPGMKPGPD+IGIV ISHGCTGVAARAC LVG+DPT+VAEI
Sbjct: 169 ETLTEFLSKAKGNAVEWIQMPGMKPGPDAIGIVTISHGCTGVAARACSLVGIDPTKVAEI 228

Query: 238 LKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGS 297
           LKDR SW RDCRSV+V+    TG+ GTIELLYMQ+YAPTTLA ARDFW LRYTSVLEDGS
Sbjct: 229 LKDRTSWLRDCRSVDVLTAFSTGNGGTIELLYMQMYAPTTLASARDFWTLRYTSVLEDGS 288

Query: 298 LVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPE 357
           LVVCERSL+ TQ GPSMP    FVRAEM PSGYLIRPCEGGGS+IHIVDHMDLEPWSVPE
Sbjct: 289 LVVCERSLSGTQGGPSMPAVQQFVRAEMQPSGYLIRPCEGGGSLIHIVDHMDLEPWSVPE 348

Query: 358 VLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEA 417
           VLRPLYESST++AQK TM+ALRHLRQI+QEVS   V GWGR+PAALR  SQRL +GFNEA
Sbjct: 349 VLRPLYESSTVLAQKVTMSALRHLRQIAQEVSSDVVLGWGRQPAALRTFSQRLCKGFNEA 408

Query: 418 LNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQD 477
           +NGFTD+GWS++ +DG++DVT+ VNSSPSK+ G Q +  +G P++   +LCAKASMLLQ+
Sbjct: 409 VNGFTDDGWSLMGNDGMEDVTILVNSSPSKLFGQQFASSDGLPALGGGILCAKASMLLQN 468

Query: 478 VPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEH 536
           VPPA+L+RFLREHRSEWADS+IDAYSAA+ KA PC++P  R G F GGQVILPLAHT+EH
Sbjct: 469 VPPALLVRFLREHRSEWADSNIDAYSAASWKASPCTVPSSRVGGFGGGQVILPLAHTVEH 528

Query: 537 EEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPI 596
           EEFLEVIKLEN    +E+ ++  D+FLLQLCSG+DENAVG CAELVFAPIDAS +D +P+
Sbjct: 529 EEFLEVIKLENHGLTQEEALLSRDMFLLQLCSGLDENAVGACAELVFAPIDASLADSSPL 588

Query: 597 IPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFA 656
           +PSGFR+IPLDSG D  SPNRTLDLAS+LE+G  G + S D     G+ +SV+TIAFQF 
Sbjct: 589 LPSGFRVIPLDSGMDGSSPNRTLDLASSLEIGSAGARTSVDYGGNSGNLRSVLTIAFQFT 648

Query: 657 FEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQ 716
           FE HL+ENVASMARQYVRG++ASVQRVA+AL+PSR GS+ G R PPG+PEA TLARW+CQ
Sbjct: 649 FENHLRENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARWVCQ 708

Query: 717 SYR 719
           SYR
Sbjct: 709 SYR 711


>gi|317160484|gb|ADV04324.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 845

 Score = 1127 bits (2915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/724 (75%), Positives = 621/724 (85%), Gaps = 18/724 (2%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAV+S  S++ + SG     MD GKYVRYT EQVEALERLYHECPKPSS+RRQQLIRECP
Sbjct: 1   MAVTS--SKEGKFSG-----MDQGKYVRYTAEQVEALERLYHECPKPSSIRRQQLIRECP 53

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKL+AMNKLLMEENDRLQKQVSQLVY
Sbjct: 54  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSQLVY 113

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQH----HLTPQQQHQHPPRDASPAGLLSIAE 177
           EN +FRQQ QNA ++ATTDTSCESVVTS +H    HLTP+     PPRDASPAGLLSIAE
Sbjct: 114 ENGYFRQQLQNA-SIATTDTSCESVVTSVKHQQQNHLTPRD----PPRDASPAGLLSIAE 168

Query: 178 ETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEI 237
           ETLTEFLSKA G AVEW+QMPGMKPGPD+IGIV ISHGCTGVAARAC LVG+DPT+VAEI
Sbjct: 169 ETLTEFLSKAKGNAVEWIQMPGMKPGPDAIGIVTISHGCTGVAARACSLVGIDPTKVAEI 228

Query: 238 LKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGS 297
           LKDR SW RDCRSV+V+    TG+ GT+ELLYMQ+YAPTTLA ARDFW LRYTSVLEDGS
Sbjct: 229 LKDRTSWLRDCRSVDVLTAFSTGNGGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGS 288

Query: 298 LVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPE 357
           LVVCERSL+ TQ GPSMP   HFVRAEM PSGYLIRPCEGGGS+IHIVDHMDLEPWSVPE
Sbjct: 289 LVVCERSLSGTQGGPSMPAVQHFVRAEMQPSGYLIRPCEGGGSLIHIVDHMDLEPWSVPE 348

Query: 358 VLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEA 417
           VLRPLYESST++AQK TMAALRHLRQI+QEVS   V GWGR+PAALR  SQRL +GFNEA
Sbjct: 349 VLRPLYESSTVLAQKVTMAALRHLRQIAQEVSSDVVLGWGRQPAALRTFSQRLCKGFNEA 408

Query: 418 LNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQD 477
           +NGFTD+GWS++ +DG+DDVT+ +NSSPSK++G Q +  +G P++   +LCAKASMLLQ+
Sbjct: 409 VNGFTDDGWSLMGNDGMDDVTILINSSPSKLLGQQFASSDGLPALGGGILCAKASMLLQN 468

Query: 478 VPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPR--AGNFGGQVILPLAHTIE 535
           VPPA+L+RFLREHRSEWADS+IDAYSAA+ KA PC++P  R      GGQVILPLAHT+E
Sbjct: 469 VPPALLVRFLREHRSEWADSNIDAYSAASWKASPCTVPSSRIGGFGGGGQVILPLAHTVE 528

Query: 536 HEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAP 595
           HEEFLEVIKLEN    +E+ ++  D+FLLQLCSG+DENAVG CAELVFAPIDAS +D +P
Sbjct: 529 HEEFLEVIKLENNGLTQEEALLSRDMFLLQLCSGIDENAVGACAELVFAPIDASLADSSP 588

Query: 596 IIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
           ++PSGFR+IPLDSG D  SPNRTLDLASALE+G  G + S D      + +SV+TIAFQF
Sbjct: 589 LLPSGFRVIPLDSGMDGSSPNRTLDLASALEIGSAGTRTSVDYGGNSSNLRSVLTIAFQF 648

Query: 656 AFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWIC 715
            FE HL+ENVA+MARQYVRG++ASVQRVA+AL+PSR GS+ G R PPG+PEA TLARW+C
Sbjct: 649 TFENHLRENVATMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARWVC 708

Query: 716 QSYR 719
           QSYR
Sbjct: 709 QSYR 712


>gi|89514867|gb|ABD75308.1| class III homeodomain-leucine zipper protein C3HDZ3 [Ginkgo biloba]
          Length = 837

 Score = 1118 bits (2892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/703 (75%), Positives = 610/703 (86%), Gaps = 8/703 (1%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K  MD+ KYVRYT EQVEALERLY++CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 8   KPAMDSSKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 67

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN + RQQ Q A ++AT
Sbjct: 68  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYLRQQIQTA-SIAT 126

Query: 139 TDTSCESVVTSG--QHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 196
           TDTSCESVVTSG  QHHLTPQ    HPPRDASPAGLLSIAEETLT+FLSKATGTAV+W+Q
Sbjct: 127 TDTSCESVVTSGPHQHHLTPQ----HPPRDASPAGLLSIAEETLTQFLSKATGTAVDWIQ 182

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDSIGIVAISH CTGVA+RACGLVGL+ ++VAEILKDRPSW RDCR ++V+  
Sbjct: 183 MPGMKPGPDSIGIVAISHSCTGVASRACGLVGLESSKVAEILKDRPSWLRDCRCLDVLTA 242

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
            PTG+ GTIELLY Q+YAPTTLA ARD W LRYTSVLEDGSLVVCERSL  TQ GP+MP 
Sbjct: 243 FPTGNGGTIELLYTQMYAPTTLASARDIWTLRYTSVLEDGSLVVCERSLTGTQGGPNMPS 302

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
             HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV+RPLYESST++AQK T++
Sbjct: 303 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVIRPLYESSTVLAQKMTIS 362

Query: 377 ALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
           ALRHLRQ++QEVS   V GWGR+PAALRA SQRL RGFNEA+NGFTD+GWS+L +DG+DD
Sbjct: 363 ALRHLRQVAQEVSGEVVLGWGRQPAALRAFSQRLGRGFNEAVNGFTDDGWSLLGNDGMDD 422

Query: 437 VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWAD 496
           VT+ +NSSPSK++  QL+  +G  ++   +LCAKASMLLQ+VPPA+L+RFLREHRSEWAD
Sbjct: 423 VTIAINSSPSKLLASQLAASDGLAALGGGILCAKASMLLQNVPPALLVRFLREHRSEWAD 482

Query: 497 SSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
            +IDAYS+AA+KA P S+P  R G FG QVILPLAHT+EHEEFLEVIKLE      E+ +
Sbjct: 483 CNIDAYSSAAMKANPYSIPSSRGGVFGSQVILPLAHTMEHEEFLEVIKLEGHGLTHEETV 542

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPN 616
           +  D+FLLQLCSG+DENAVG CA+LVFAPIDASF+DDAP++PSGFR+IPLDSG D  +PN
Sbjct: 543 LSRDMFLLQLCSGIDENAVGCCAQLVFAPIDASFADDAPLLPSGFRVIPLDSGTDGSTPN 602

Query: 617 RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGI 676
           RTLDLASAL+VG  G + SGD  +   + +SV+TIAFQF +E HL++NVA+MARQYVR +
Sbjct: 603 RTLDLASALDVGSAGTRTSGDYGSST-NMRSVLTIAFQFTYETHLRDNVAAMARQYVRSV 661

Query: 677 IASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +ASVQRVA+AL+PSR  +  G RPPPG+PEA TLA WICQSYR
Sbjct: 662 VASVQRVAMALAPSRQSTLLGPRPPPGTPEALTLAGWICQSYR 704


>gi|90110448|gb|ABD90526.1| class III homeodomain-leucine zipper [Ginkgo biloba]
          Length = 842

 Score = 1115 bits (2885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/703 (76%), Positives = 606/703 (86%), Gaps = 5/703 (0%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K  MD  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 10  KGAMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 69

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN + RQQ QNA ++AT
Sbjct: 70  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNA-SVAT 128

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           TDTSCESVVTSGQH   P  QH  PPRDASPAGLLSIAEETL EFLSKATGTAV+WVQMP
Sbjct: 129 TDTSCESVVTSGQHQHNPTPQH--PPRDASPAGLLSIAEETLAEFLSKATGTAVDWVQMP 186

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDSIGIVAISH C+GVAARACGLVGL+PT++AEILKDRPSW RDCR ++V+   P
Sbjct: 187 GMKPGPDSIGIVAISHSCSGVAARACGLVGLEPTKIAEILKDRPSWLRDCRCLDVLTPFP 246

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
           TG+ GTIELLYMQ YAPTTLA ARDFW LRYT+VLEDGSLVVCERSL+  Q GPS+  A 
Sbjct: 247 TGNGGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQGGPSIAPAQ 306

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
           HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQK T+AAL
Sbjct: 307 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAAL 366

Query: 379 RHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
           R +RQI+QEV+   V GWGR+PA LR  SQRLSRGFNEA+NGFTD+GWS++ +DG++DVT
Sbjct: 367 RRIRQIAQEVTGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGNDGMEDVT 426

Query: 439 VHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSS 498
           + +NSSPSK++G Q++  NG  ++   +LCAKASMLLQ+VPPA+L+RFLREHRSEWAD +
Sbjct: 427 IAINSSPSKLLGSQVNSSNGLTAVGGGILCAKASMLLQNVPPALLVRFLREHRSEWADCN 486

Query: 499 IDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM 557
           IDAYSAAA+KA P S+P  RAG F G QVILPLAHT+EHEEFLEVIKLE     +E+ ++
Sbjct: 487 IDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVL 546

Query: 558 PSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKD-TPSPN 616
             D+FLLQLCSG+DENA G CA+LVFAPID SF+DDAP++PSGFR+IPLDS  D T  PN
Sbjct: 547 SRDMFLLQLCSGIDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDSRTDGTSGPN 606

Query: 617 RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGI 676
           RTLDLASALEVG  G + SGDS     + +SV+TIAFQF +E HL+ENVASMARQYVR +
Sbjct: 607 RTLDLASALEVGSAGTRTSGDSGANSFNLRSVLTIAFQFTYENHLRENVASMARQYVRSV 666

Query: 677 IASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +ASVQRVA+AL+PSR  S+ G R PPG+PEA TLARWICQSYR
Sbjct: 667 VASVQRVAMALAPSRLSSHVGPRLPPGTPEALTLARWICQSYR 709


>gi|89514863|gb|ABD75306.1| class III homeodomain-leucine zipper protein C3HDZ1 [Ginkgo biloba]
          Length = 842

 Score = 1115 bits (2884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/703 (76%), Positives = 606/703 (86%), Gaps = 5/703 (0%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K  MD  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 10  KGAMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 69

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN + RQQ QNA ++AT
Sbjct: 70  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNA-SVAT 128

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           TDTSCESVVTSGQH   P  QH  PPRDASPAGLLSIAEETL EFLSKATGTAV+WVQMP
Sbjct: 129 TDTSCESVVTSGQHQHNPTPQH--PPRDASPAGLLSIAEETLAEFLSKATGTAVDWVQMP 186

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDSIGIVAISH C+GVAARACGLVGL+PT++AEILKDRPSW RDCR ++V+   P
Sbjct: 187 GMKPGPDSIGIVAISHSCSGVAARACGLVGLEPTKIAEILKDRPSWLRDCRCLDVLTPFP 246

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
           TG+ GTIELLYMQ YAPTTLA ARDFW LRYT+VLEDGSLVVCERSL+  Q GPS+  A 
Sbjct: 247 TGNGGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQGGPSIAPAQ 306

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
           HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQK T+AAL
Sbjct: 307 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAAL 366

Query: 379 RHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
           R +RQI+QEV+   V GWGR+PA LR  SQRLSRGFNEA+NGFTD+GWS++ +DG++DVT
Sbjct: 367 RRIRQIAQEVTGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGNDGMEDVT 426

Query: 439 VHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSS 498
           + +NSSPSK++G Q++  NG  ++   +LCAKASMLLQ+VPPA+L+RFLREHRSEWAD +
Sbjct: 427 IAINSSPSKLLGSQVNSSNGLTAVGGGILCAKASMLLQNVPPALLVRFLREHRSEWADCN 486

Query: 499 IDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM 557
           IDAYSAAA+KA P S+P  RAG F G QVILPLAHT+EHEEFLEVIKLE     +E+ ++
Sbjct: 487 IDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVL 546

Query: 558 PSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKD-TPSPN 616
             D+FLLQLCSG+DENA G CA+LVFAPID SF+DDAP++PSGFR+IPLDS  D T  PN
Sbjct: 547 SRDMFLLQLCSGIDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDSRTDGTSGPN 606

Query: 617 RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGI 676
           RTLDLASALEVG  G + SGDS     + +SV+TIAFQF +E HL+ENVASMARQYVR +
Sbjct: 607 RTLDLASALEVGSAGTRTSGDSGANSFNLRSVLTIAFQFTYENHLRENVASMARQYVRSV 666

Query: 677 IASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +ASVQRVA+AL+PSR  S+ G R PPG+PEA TLARWICQSYR
Sbjct: 667 VASVQRVAMALAPSRLSSHVGPRLPPGTPEALTLARWICQSYR 709


>gi|89514873|gb|ABD75311.1| class III homeodomain-leucine zipper protein C3HDZ1 [Taxus globosa]
          Length = 837

 Score = 1111 bits (2873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/702 (76%), Positives = 604/702 (86%), Gaps = 5/702 (0%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K  MD  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 7   KNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 66

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN + RQQ QNA ++AT
Sbjct: 67  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNA-SVAT 125

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           TDTSCESVVTSGQH   P  QH  P RDASPAGLLSIAEETL EFL KATGTAV+WVQMP
Sbjct: 126 TDTSCESVVTSGQHQHNPTPQH--PLRDASPAGLLSIAEETLAEFLLKATGTAVDWVQMP 183

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDSIGIVAISH CTGVAARACGLVGL+PT+VAEILKDRPSW RDCR ++V+   P
Sbjct: 184 GMKPGPDSIGIVAISHSCTGVAARACGLVGLEPTKVAEILKDRPSWLRDCRCLDVLTAFP 243

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
           TG+ GTIELLYMQ YAPTTLA ARDFW LRYT+VLEDGSLVVCERSLN+TQ GPSMP  P
Sbjct: 244 TGNGGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLNSTQGGPSMPPVP 303

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
           HFVRAEMLPSGYLIRPCEGGGSII IVDHMDLEPWSVPEVLRPLYESST++AQK T+AAL
Sbjct: 304 HFVRAEMLPSGYLIRPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTILAQKMTIAAL 363

Query: 379 RHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
           R LRQI+QEV+   V GWGR+PA LR  SQRLSRGFNEA+NGFTD+GWS + SDG++DVT
Sbjct: 364 RRLRQIAQEVTGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSSMGSDGVEDVT 423

Query: 439 VHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSS 498
           + +NSSPSK++G Q++  NG  ++   +LCAKASMLLQ+VPPA+L+RFLREHRSEWAD S
Sbjct: 424 IVINSSPSKLVGSQVNSSNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADCS 483

Query: 499 IDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM 557
           +DAYSAAA+KA P  LP  RAG F G QVILPLAHT+EHEEFLEVIKLE     +E+ ++
Sbjct: 484 MDAYSAAALKASPYCLPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVL 543

Query: 558 PSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNR 617
             D+FLLQLCSG+DE+A G CA+LVFAPID SF+DDAP++PSGFR+IPL+S   +   NR
Sbjct: 544 SRDMFLLQLCSGIDESAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLESRTVSAGANR 603

Query: 618 TLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGII 677
           TLDLASALEVG TG++ASGDS     + +SV+TIAFQF +E HL+ENVA+MARQYVR ++
Sbjct: 604 TLDLASALEVGSTGSRASGDSGAN-SNLRSVLTIAFQFTYENHLRENVAAMARQYVRSVV 662

Query: 678 ASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           ASVQRVA+AL+PSR   + G RPPPG+PEA TLARWIC SYR
Sbjct: 663 ASVQRVAMALAPSRLNPHIGPRPPPGTPEALTLARWICHSYR 704


>gi|110349540|gb|ABG73245.1| class III HD-Zip protein HDZ31 [Pinus taeda]
          Length = 842

 Score = 1104 bits (2856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/720 (74%), Positives = 612/720 (85%), Gaps = 13/720 (1%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAV +  ++D+++S      MD  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 1   MAVMAN-NKDAKNS------MDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECP 53

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY
Sbjct: 54  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVY 113

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLT 181
           EN + RQQ QNA ++A TDTSCESVVTSGQH   P  QH  PPRDASPAGLLSIAEETLT
Sbjct: 114 ENGYMRQQLQNA-SVAATDTSCESVVTSGQHQHNPTPQH--PPRDASPAGLLSIAEETLT 170

Query: 182 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDR 241
           EFLSKA G AV+WVQMPGMKPGPDSIGIVAIS+ C GVAARACGLVGLDPT+VAEILKDR
Sbjct: 171 EFLSKAKGAAVDWVQMPGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDR 230

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 301
           PSW RDCR ++V+   PTG+ GTIELLYMQ YA TTLA ARDFW LRYT+VLEDGSLVVC
Sbjct: 231 PSWLRDCRCLDVLTAFPTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVC 290

Query: 302 ERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 361
           ERSL+ TQ GPS+P   HFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRP
Sbjct: 291 ERSLSGTQGGPSIPPVQHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRP 350

Query: 362 LYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
           LYESST++AQK T+AALR LRQI+QE +   V GWGR+PA LR  SQRLSRGFNEA+NGF
Sbjct: 351 LYESSTVLAQKMTIAALRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGF 410

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
           TD+GWS++ SDG++DVT+ +NSSP+K    Q++  NG  ++   +LCAKASMLLQ+VPPA
Sbjct: 411 TDDGWSLMGSDGVEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPA 470

Query: 482 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFL 540
           +L+RFLREHRSEWADS+IDAYSAAA+K+ P S+P  RAG F G QVILPLAHT+EHEEFL
Sbjct: 471 LLVRFLREHRSEWADSNIDAYSAAALKSSPYSVPGSRAGGFSGSQVILPLAHTVEHEEFL 530

Query: 541 EVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSG 600
           EVIKLE     +E+ ++  D+FLLQLCSG+DENA G CAELVFAPID SF+DDAP++PSG
Sbjct: 531 EVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSG 590

Query: 601 FRIIPLDSGKD-TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           FR+IPL+S  D +  PNRTLDLASALEVG TG + SGDS T   + +SV+TIAFQF +E 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSTGTRTSGDSGTS-SNLRSVLTIAFQFTYES 649

Query: 660 HLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           HL+ENVA+MARQYVR ++ASVQRVA+A++PSR  S+ G RPPPG+PEA TLARWICQSYR
Sbjct: 650 HLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYR 709


>gi|82908746|gb|ABB93543.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908758|gb|ABB93549.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908766|gb|ABB93553.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908776|gb|ABB93558.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908792|gb|ABB93566.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908814|gb|ABB93577.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908824|gb|ABB93582.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908842|gb|ABB93591.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
          Length = 842

 Score = 1102 bits (2851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/720 (74%), Positives = 610/720 (84%), Gaps = 13/720 (1%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAV +  ++D+++S      MD  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 1   MAVMAN-NKDAKNS------MDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECP 53

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY
Sbjct: 54  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVY 113

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLT 181
           EN + RQQ QNA ++A TDTSCESVVTSGQH   P  QH  PPRDASPAGLLSIAEETL 
Sbjct: 114 ENGYMRQQLQNA-SVAATDTSCESVVTSGQHQHNPTPQH--PPRDASPAGLLSIAEETLA 170

Query: 182 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDR 241
           EFLSKA G AV+WVQMPGMKPGPDSIGIVAIS+ C GVAARACGLVGLDPT+VAEILKDR
Sbjct: 171 EFLSKAKGAAVDWVQMPGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDR 230

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 301
           PSW RDCR ++V+   PTG+ GTIELLYMQ YA TTLA ARDFW LRYT+VLEDGSLVVC
Sbjct: 231 PSWLRDCRCLDVLTAFPTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVC 290

Query: 302 ERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 361
           ERSL+ TQ GPS+P   HFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRP
Sbjct: 291 ERSLSGTQGGPSIPPVQHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRP 350

Query: 362 LYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
           LYESST++AQK T+AALR LRQI+QE +   V GWGR+PA LR  SQRLSRGFNEA+NGF
Sbjct: 351 LYESSTVLAQKMTIAALRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGF 410

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
           TD+GWS+L SDG++DVT+ +NSSP+K    Q++  NG  ++   +LCAKASMLLQ+VPPA
Sbjct: 411 TDDGWSLLGSDGVEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPA 470

Query: 482 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFL 540
           +L+RFLREHRSEWADS+IDAYSAAA+KA P S+P  RAG F G QVILPLAHT+EHEEFL
Sbjct: 471 LLVRFLREHRSEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFL 530

Query: 541 EVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSG 600
           EVIKLE     +E+ ++  D+FLLQLCSG+DENA G CAELVFAPID SF+DDAP++PSG
Sbjct: 531 EVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSG 590

Query: 601 FRIIPLDSGKD-TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           FR+IPL+S  D +  PNRTLDLASALEVG  G + SGDS T   + +SV+TIAFQF +E 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGTN-SNLRSVLTIAFQFTYES 649

Query: 660 HLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           HL+ENVA+MARQYVR ++ASVQRVA+AL+PSR  ++ G RPPPG+PEA TLARWICQSYR
Sbjct: 650 HLRENVAAMARQYVRSVVASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYR 709


>gi|82909735|gb|ABB94031.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score = 1100 bits (2846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/720 (74%), Positives = 609/720 (84%), Gaps = 13/720 (1%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAV +  ++D+++S      MD  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 1   MAVMAN-NKDAKNS------MDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECP 53

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY
Sbjct: 54  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVY 113

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLT 181
           EN + RQQ QNA ++A TDTSCESVVTSGQH   P  QH  PPRDASPAGLLSIAEETL 
Sbjct: 114 ENGYMRQQLQNA-SVAATDTSCESVVTSGQHQHNPTPQH--PPRDASPAGLLSIAEETLA 170

Query: 182 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDR 241
           EFLSKA G AV+WVQMPGMKPGPDSIGIVAIS+ C GVAARACGLVGLDPT+VAEILKDR
Sbjct: 171 EFLSKAKGAAVDWVQMPGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDR 230

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 301
           PSW RDCR ++V+   PTG+ GTIELLYMQ YA TTLA ARDFW LRYT+VLEDGSLVVC
Sbjct: 231 PSWLRDCRCLDVLTAFPTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVC 290

Query: 302 ERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 361
           ERSL+ TQ GPS+P   HFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRP
Sbjct: 291 ERSLSGTQGGPSIPPVQHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRP 350

Query: 362 LYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
           LYESST++AQK T+AALR LRQI+QE +   V GWGR+PA LR  SQRLSRGFNEA+NGF
Sbjct: 351 LYESSTVLAQKMTIAALRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGF 410

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
           TD+GWS+L SDG++DVT+ +NSSP+K    Q++  NG  ++   +LCAKASMLLQ+VPPA
Sbjct: 411 TDDGWSLLGSDGVEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPA 470

Query: 482 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFL 540
           +L+RFLREHRSEWADS+IDAYSAAA+KA P S+P  RAG F G QVILPLAHT+EHEEFL
Sbjct: 471 LLVRFLREHRSEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFL 530

Query: 541 EVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSG 600
           EVIKLE     +E+ ++  D+FLLQLCSG+DENA G CAELVFAPID SF+DDAP++PSG
Sbjct: 531 EVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSG 590

Query: 601 FRIIPLDSGKD-TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           FR+IPL+S  D +  PNRTLDLASALEVG  G + SGDS     + +SV+TIAFQF +E 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGAN-SNLRSVLTIAFQFTYES 649

Query: 660 HLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           HL+ENVA+MARQYVR ++ASVQRVA+AL+PSR  ++ G RPPPG+PEA TLARWICQSYR
Sbjct: 650 HLRENVAAMARQYVRSVVASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYR 709


>gi|82908650|gb|ABB93495.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908654|gb|ABB93497.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908656|gb|ABB93498.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908658|gb|ABB93499.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908660|gb|ABB93500.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908662|gb|ABB93501.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908664|gb|ABB93502.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908666|gb|ABB93503.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908668|gb|ABB93504.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908670|gb|ABB93505.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908672|gb|ABB93506.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908674|gb|ABB93507.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908676|gb|ABB93508.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908678|gb|ABB93509.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908680|gb|ABB93510.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908682|gb|ABB93511.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908684|gb|ABB93512.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908686|gb|ABB93513.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908688|gb|ABB93514.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908690|gb|ABB93515.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908692|gb|ABB93516.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908694|gb|ABB93517.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908696|gb|ABB93518.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908698|gb|ABB93519.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908700|gb|ABB93520.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908702|gb|ABB93521.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908704|gb|ABB93522.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908706|gb|ABB93523.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908708|gb|ABB93524.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908710|gb|ABB93525.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908712|gb|ABB93526.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908714|gb|ABB93527.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908716|gb|ABB93528.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908718|gb|ABB93529.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908720|gb|ABB93530.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908722|gb|ABB93531.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908724|gb|ABB93532.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908726|gb|ABB93533.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908728|gb|ABB93534.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908730|gb|ABB93535.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908732|gb|ABB93536.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908734|gb|ABB93537.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908736|gb|ABB93538.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908738|gb|ABB93539.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908740|gb|ABB93540.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908742|gb|ABB93541.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908744|gb|ABB93542.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908748|gb|ABB93544.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908750|gb|ABB93545.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908752|gb|ABB93546.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908754|gb|ABB93547.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908756|gb|ABB93548.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908760|gb|ABB93550.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908762|gb|ABB93551.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908764|gb|ABB93552.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908768|gb|ABB93554.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908770|gb|ABB93555.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908772|gb|ABB93556.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908774|gb|ABB93557.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908778|gb|ABB93559.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908780|gb|ABB93560.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908782|gb|ABB93561.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908784|gb|ABB93562.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908786|gb|ABB93563.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908788|gb|ABB93564.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908790|gb|ABB93565.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908794|gb|ABB93567.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908796|gb|ABB93568.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908798|gb|ABB93569.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908800|gb|ABB93570.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908802|gb|ABB93571.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908804|gb|ABB93572.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908806|gb|ABB93573.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908808|gb|ABB93574.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908810|gb|ABB93575.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908812|gb|ABB93576.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908816|gb|ABB93578.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908818|gb|ABB93579.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908820|gb|ABB93580.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908822|gb|ABB93581.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908826|gb|ABB93583.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908828|gb|ABB93584.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908830|gb|ABB93585.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908832|gb|ABB93586.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908834|gb|ABB93587.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908836|gb|ABB93588.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908838|gb|ABB93589.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908840|gb|ABB93590.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908844|gb|ABB93592.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82909691|gb|ABB94009.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909693|gb|ABB94010.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909695|gb|ABB94011.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909697|gb|ABB94012.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909699|gb|ABB94013.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909701|gb|ABB94014.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909703|gb|ABB94015.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909705|gb|ABB94016.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909707|gb|ABB94017.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909709|gb|ABB94018.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909711|gb|ABB94019.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909713|gb|ABB94020.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909715|gb|ABB94021.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909717|gb|ABB94022.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909719|gb|ABB94023.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909721|gb|ABB94024.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909723|gb|ABB94025.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909725|gb|ABB94026.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909727|gb|ABB94027.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909729|gb|ABB94028.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909731|gb|ABB94029.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909733|gb|ABB94030.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909737|gb|ABB94032.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909739|gb|ABB94033.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909741|gb|ABB94034.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909743|gb|ABB94035.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909745|gb|ABB94036.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909747|gb|ABB94037.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909749|gb|ABB94038.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909751|gb|ABB94039.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909753|gb|ABB94040.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909755|gb|ABB94041.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909757|gb|ABB94042.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909759|gb|ABB94043.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909761|gb|ABB94044.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909763|gb|ABB94045.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909765|gb|ABB94046.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909767|gb|ABB94047.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909769|gb|ABB94048.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909771|gb|ABB94049.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909773|gb|ABB94050.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909775|gb|ABB94051.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909777|gb|ABB94052.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909779|gb|ABB94053.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909781|gb|ABB94054.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909783|gb|ABB94055.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909785|gb|ABB94056.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909787|gb|ABB94057.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909789|gb|ABB94058.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909791|gb|ABB94059.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909793|gb|ABB94060.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909795|gb|ABB94061.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909797|gb|ABB94062.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909799|gb|ABB94063.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909801|gb|ABB94064.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909803|gb|ABB94065.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909805|gb|ABB94066.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909807|gb|ABB94067.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909809|gb|ABB94068.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909811|gb|ABB94069.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909813|gb|ABB94070.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909815|gb|ABB94071.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909817|gb|ABB94072.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909819|gb|ABB94073.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909821|gb|ABB94074.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909823|gb|ABB94075.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909825|gb|ABB94076.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909827|gb|ABB94077.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909829|gb|ABB94078.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909831|gb|ABB94079.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909833|gb|ABB94080.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909835|gb|ABB94081.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909837|gb|ABB94082.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909839|gb|ABB94083.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909841|gb|ABB94084.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909843|gb|ABB94085.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909845|gb|ABB94086.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909847|gb|ABB94087.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909849|gb|ABB94088.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909851|gb|ABB94089.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909853|gb|ABB94090.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909855|gb|ABB94091.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909857|gb|ABB94092.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909859|gb|ABB94093.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909861|gb|ABB94094.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909863|gb|ABB94095.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909865|gb|ABB94096.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909867|gb|ABB94097.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909869|gb|ABB94098.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909873|gb|ABB94100.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909875|gb|ABB94101.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909877|gb|ABB94102.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909879|gb|ABB94103.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909881|gb|ABB94104.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909883|gb|ABB94105.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909885|gb|ABB94106.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909887|gb|ABB94107.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909889|gb|ABB94108.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909891|gb|ABB94109.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909893|gb|ABB94110.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909895|gb|ABB94111.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909897|gb|ABB94112.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909899|gb|ABB94113.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909901|gb|ABB94114.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909903|gb|ABB94115.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909905|gb|ABB94116.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909907|gb|ABB94117.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909909|gb|ABB94118.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909911|gb|ABB94119.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909913|gb|ABB94120.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909915|gb|ABB94121.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909917|gb|ABB94122.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909919|gb|ABB94123.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909921|gb|ABB94124.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909923|gb|ABB94125.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909925|gb|ABB94126.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909927|gb|ABB94127.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909929|gb|ABB94128.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score = 1100 bits (2846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/720 (74%), Positives = 609/720 (84%), Gaps = 13/720 (1%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAV +  ++D+++S      MD  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 1   MAVMAN-NKDAKNS------MDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECP 53

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY
Sbjct: 54  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVY 113

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLT 181
           EN + RQQ QNA ++A TDTSCESVVTSGQH   P  QH  PPRDASPAGLLSIAEETL 
Sbjct: 114 ENGYMRQQLQNA-SVAATDTSCESVVTSGQHQHNPTPQH--PPRDASPAGLLSIAEETLA 170

Query: 182 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDR 241
           EFLSKA G AV+WVQMPGMKPGPDSIGIVAIS+ C GVAARACGLVGLDPT+VAEILKDR
Sbjct: 171 EFLSKAKGAAVDWVQMPGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDR 230

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 301
           PSW RDCR ++V+   PTG+ GTIELLYMQ YA TTLA ARDFW LRYT+VLEDGSLVVC
Sbjct: 231 PSWLRDCRCLDVLTAFPTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVC 290

Query: 302 ERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 361
           ERSL+ TQ GPS+P   HFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRP
Sbjct: 291 ERSLSGTQGGPSIPPVQHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRP 350

Query: 362 LYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
           LYESST++AQK T+AALR LRQI+QE +   V GWGR+PA LR  SQRLSRGFNEA+NGF
Sbjct: 351 LYESSTVLAQKMTIAALRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGF 410

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
           TD+GWS+L SDG++DVT+ +NSSP+K    Q++  NG  ++   +LCAKASMLLQ+VPPA
Sbjct: 411 TDDGWSLLGSDGVEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPA 470

Query: 482 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFL 540
           +L+RFLREHRSEWADS+IDAYSAAA+KA P S+P  RAG F G QVILPLAHT+EHEEFL
Sbjct: 471 LLVRFLREHRSEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFL 530

Query: 541 EVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSG 600
           EVIKLE     +E+ ++  D+FLLQLCSG+DENA G CAELVFAPID SF+DDAP++PSG
Sbjct: 531 EVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSG 590

Query: 601 FRIIPLDSGKD-TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           FR+IPL+S  D +  PNRTLDLASALEVG  G + SGDS     + +SV+TIAFQF +E 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGAN-SNLRSVLTIAFQFTYES 649

Query: 660 HLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           HL+ENVA+MARQYVR ++ASVQRVA+AL+PSR  ++ G RPPPG+PEA TLARWICQSYR
Sbjct: 650 HLRENVAAMARQYVRSVVASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYR 709


>gi|82908652|gb|ABB93496.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
          Length = 842

 Score = 1100 bits (2844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/720 (74%), Positives = 609/720 (84%), Gaps = 13/720 (1%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAV +  ++D+++S      MD  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 1   MAVMAN-NKDAKNS------MDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECP 53

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY
Sbjct: 54  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVY 113

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLT 181
           EN + RQQ QNA ++A TDTSCESVVTSGQH   P  QH  PPRDASPAGLLSIAEETL 
Sbjct: 114 ENGYMRQQLQNA-SVAATDTSCESVVTSGQHQHNPTPQH--PPRDASPAGLLSIAEETLA 170

Query: 182 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDR 241
           EFLSKA G AV+WVQMPGMKPGPDSIGIVAIS+ C GVAARACGLVGLDPT+VAE+LKDR
Sbjct: 171 EFLSKAKGAAVDWVQMPGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEVLKDR 230

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 301
           PSW RDCR ++V+   PTG+ GTIELLYMQ YA TTLA ARDFW LRYT+VLEDGSLVVC
Sbjct: 231 PSWLRDCRCLDVLTAFPTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVC 290

Query: 302 ERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 361
           ERSL+ TQ GPS+P   HFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRP
Sbjct: 291 ERSLSGTQGGPSIPPVQHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRP 350

Query: 362 LYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
           LYESST++AQK T+AALR LRQI+QE +   V GWGR+PA LR  SQRLSRGFNEA+NGF
Sbjct: 351 LYESSTVLAQKMTIAALRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGF 410

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
           TD+GWS+L SDG++DVT+ +NSSP+K    Q++  NG  ++   +LCAKASMLLQ+VPPA
Sbjct: 411 TDDGWSLLGSDGVEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPA 470

Query: 482 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFL 540
           +L+RFLREHRSEWADS+IDAYSAAA+KA P S+P  RAG F G QVILPLAHT+EHEEFL
Sbjct: 471 LLVRFLREHRSEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFL 530

Query: 541 EVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSG 600
           EVIKLE     +E+ ++  D+FLLQLCSG+DENA G CAELVFAPID SF+DDAP++PSG
Sbjct: 531 EVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSG 590

Query: 601 FRIIPLDSGKD-TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           FR+IPL+S  D +  PNRTLDLASALEVG  G + SGDS     + +SV+TIAFQF +E 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGAN-SNLRSVLTIAFQFTYES 649

Query: 660 HLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           HL+ENVA+MARQYVR ++ASVQRVA+AL+PSR  ++ G RPPPG+PEA TLARWICQSYR
Sbjct: 650 HLRENVAAMARQYVRSVVASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYR 709


>gi|317160480|gb|ADV04322.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 842

 Score = 1099 bits (2843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/720 (74%), Positives = 609/720 (84%), Gaps = 13/720 (1%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAV +  ++D+++S      MD  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 1   MAVMAN-NKDAKNS------MDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECP 53

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY
Sbjct: 54  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVY 113

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLT 181
           EN + RQQ QNA ++A TDTSCESVVTSGQH   P  QH  PPRDASPAGLLSIAEETL 
Sbjct: 114 ENGYMRQQLQNA-SVAATDTSCESVVTSGQHQHNPTPQH--PPRDASPAGLLSIAEETLA 170

Query: 182 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDR 241
           EFLSKA G AV+WVQMPGMKPGPDSIGIVAIS+ C GVAARACGLVGLDPT+VAEILKDR
Sbjct: 171 EFLSKAKGAAVDWVQMPGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDR 230

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 301
           PSW RDCR ++V+   PTG+ GTIELLYMQ YA TTLA ARDFW LRYT+VLEDGSLVVC
Sbjct: 231 PSWLRDCRCLDVLTAFPTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVC 290

Query: 302 ERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 361
           ERSL+ TQ GPS+P   HFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRP
Sbjct: 291 ERSLSGTQGGPSIPPVQHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRP 350

Query: 362 LYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
           LYESST++AQK T+AALR LRQI+QE +   V GWGR+PA LR  SQRLSRGFNEA+NGF
Sbjct: 351 LYESSTVLAQKMTIAALRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGF 410

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
           TD+GWS+L SDG++DVT+ +NSSP+K    Q++  NG  ++   +LCAKASMLLQ+VPPA
Sbjct: 411 TDDGWSLLGSDGVEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPA 470

Query: 482 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFL 540
           +L+RFLREHRSEWADS+IDAYSAAA+KA P S+P  RAG F G QVILPLAHT+EHEEFL
Sbjct: 471 LLVRFLREHRSEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFL 530

Query: 541 EVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSG 600
           EVIKLE     +E+ ++  D+FLLQLCSG+DENA G CAELVFAPID SF+DDAP++PSG
Sbjct: 531 EVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSG 590

Query: 601 FRIIPLDSGKD-TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           FR+IPL+S  D +  PNRTLDLASALEVG  G + SGDS     + +SV+TIAFQF +E 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSAGARTSGDSGAN-SNLRSVLTIAFQFTYES 649

Query: 660 HLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           HL+ENVA+MARQYVR ++ASVQRVA+AL+PSR  ++ G RPPPG+PEA TLARWICQSYR
Sbjct: 650 HLRENVAAMARQYVRSVVASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYR 709


>gi|82909871|gb|ABB94099.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score = 1098 bits (2839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/720 (74%), Positives = 608/720 (84%), Gaps = 13/720 (1%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MAV +  ++D+++S      MD  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 1   MAVMAN-NKDAKNS------MDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECP 53

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY
Sbjct: 54  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVY 113

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLT 181
           EN + RQQ QNA ++A TDTSCESVVTSGQH   P  QH  PPRDASPAGLLSIAEETL 
Sbjct: 114 ENGYMRQQLQNA-SVAATDTSCESVVTSGQHQHNPTPQH--PPRDASPAGLLSIAEETLA 170

Query: 182 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDR 241
           EFLSKA G AV+WVQMPGMKPGPDSIGIVAIS+ C GVAARACGLVGLDPT+VAEILKDR
Sbjct: 171 EFLSKAKGAAVDWVQMPGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDR 230

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 301
           PSW RDCR ++V+   PTG+ GTIELLYMQ YA TTLA ARDFW LRYT+VLEDGSLVVC
Sbjct: 231 PSWLRDCRCLDVLTAFPTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVC 290

Query: 302 ERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 361
           ERSL+ TQ GPS+P   HFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRP
Sbjct: 291 ERSLSGTQGGPSIPPVQHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRP 350

Query: 362 LYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
           LYESST++AQK T+AALR LRQI+QE +   V GWGR+PA LR  SQRLSRGFNEA+NGF
Sbjct: 351 LYESSTVLAQKMTIAALRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGF 410

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
           TD+GWS+L SDG++DVT+ +NSSP+K    Q++  NG  ++   +LCAKASMLLQ+VPPA
Sbjct: 411 TDDGWSLLGSDGVEDVTIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPA 470

Query: 482 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFL 540
           +L+RFLREHRSEWADS+IDAYSAAA+KA P S+P  RAG F G QVILPLAHT+EHEEFL
Sbjct: 471 LLVRFLREHRSEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFL 530

Query: 541 EVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSG 600
           EVIKLE     +E+ ++  D+FLLQLCSG+DENA G CAELVFAPID SF+DDAP++PSG
Sbjct: 531 EVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSG 590

Query: 601 FRIIPLDSGKD-TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           FR+IPL+S  D +  PNRTLDLASALEVG  G + SGDS     + +SV+TIAFQF +E 
Sbjct: 591 FRVIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGAN-SNLRSVLTIAFQFTYES 649

Query: 660 HLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           HL+ENVA+MARQYVR ++ASVQRVA+AL+PSR  ++   RPPPG+PEA TLARWICQSYR
Sbjct: 650 HLRENVAAMARQYVRSVVASVQRVAMALAPSRLSAHVSPRPPPGTPEALTLARWICQSYR 709


>gi|89514869|gb|ABD75309.1| class III homeodomain-leucine zipper protein C3HDZ1 [Pseudotsuga
           menziesii]
          Length = 842

 Score = 1098 bits (2839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/713 (74%), Positives = 606/713 (84%), Gaps = 12/713 (1%)

Query: 9   SRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           ++D+++S      MD  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECP+LSNIEP
Sbjct: 7   NKDAKNS------MDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPMLSNIEP 60

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQ 128
           KQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN + RQ
Sbjct: 61  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQ 120

Query: 129 QTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKAT 188
           Q QNA ++A TDTSCESVV+SGQH   P  QH  PPRDASPAGLLSIAEETL EFLSKA 
Sbjct: 121 QLQNA-SVAATDTSCESVVSSGQHQHNPTPQH--PPRDASPAGLLSIAEETLAEFLSKAK 177

Query: 189 GTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDC 248
           G AV+WVQMPGMKPGPDSIGIVAIS+ C GVAARACGLVGLDPT+VAEILK+RPSW RDC
Sbjct: 178 GAAVDWVQMPGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKERPSWLRDC 237

Query: 249 RSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           R ++V+   PTG+ GTIELLYMQ YA TTLA ARDFW LRYT+VLEDGSLVVCERSL+ T
Sbjct: 238 RCLDVLTAFPTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGT 297

Query: 309 QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL 368
           Q GPS+P   HFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRPLYESST+
Sbjct: 298 QGGPSIPPVQHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTV 357

Query: 369 IAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
           +AQK T+AALR LRQI+QE +   V GWGR+PA LR  SQRLSRGFNEA+NGFTD+GWS+
Sbjct: 358 LAQKMTIAALRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSL 417

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           + SDG++DVT+ +NSSP+K  G Q++  NG  ++   +LCAKASMLLQ+VPPA+L+RFLR
Sbjct: 418 MGSDGVEDVTIAINSSPNKHFGSQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLR 477

Query: 489 EHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLEN 547
           EHRSEWADS+IDAYSAAA+KA P S+P  RAG F G QVILPLAHT+EHEEFLEVIKLE 
Sbjct: 478 EHRSEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEG 537

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
               +E+ ++  D+FLLQLCSG+DENA G CAELVFAPID SF+DDAP++PSGFRIIPL+
Sbjct: 538 HGLTQEEAVLSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRIIPLE 597

Query: 608 SGKD-TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVA 666
           S  D +  PNRTLDLASALEVG  G + SGDS     + +SV+TIAFQF +E HL+ENVA
Sbjct: 598 SRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGAN-SNLRSVLTIAFQFTYESHLRENVA 656

Query: 667 SMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +MARQYVR ++ASVQRVA+AL+PSR  S+ G RPPPG+PEA TLARWICQSYR
Sbjct: 657 AMARQYVRTVVASVQRVAMALAPSRLSSHVGPRPPPGTPEALTLARWICQSYR 709


>gi|90110450|gb|ABD90527.1| class III homeodomain-leucine zipper [Pseudotsuga menziesii]
          Length = 842

 Score = 1097 bits (2837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/713 (74%), Positives = 605/713 (84%), Gaps = 12/713 (1%)

Query: 9   SRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           ++D+++S      MD  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEP
Sbjct: 7   NKDAKNS------MDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 60

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQ 128
           KQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN + RQ
Sbjct: 61  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQ 120

Query: 129 QTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKAT 188
           Q QNA ++A TDTSCESVVTSGQH   P  QH  PPRDASPAGLLSIAEETL EFLSKA 
Sbjct: 121 QLQNA-SVAATDTSCESVVTSGQHQHNPTPQH--PPRDASPAGLLSIAEETLAEFLSKAK 177

Query: 189 GTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDC 248
           G AV+WVQMPGMKPGPDSIGIVAIS+ C GVAARACGLVGLDPT+VAEILK+RPSW RDC
Sbjct: 178 GAAVDWVQMPGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKERPSWLRDC 237

Query: 249 RSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           R ++V+   PTG+ GTIELLYMQ YA TTLA ARDFW LRYT+VLEDGSLVVCERSL+ T
Sbjct: 238 RCLDVLTAFPTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGT 297

Query: 309 QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL 368
           Q GPS+P   HFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRPLYESST+
Sbjct: 298 QGGPSIPPVQHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTV 357

Query: 369 IAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
           +AQK T+AALR LRQI+QE +   V GWGR+PA LR  SQRLSRGFNEA+NGFTD+GWS+
Sbjct: 358 LAQKMTIAALRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSL 417

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           + SDG++DVT+ +NSSP+K  G Q++  NG  ++   + CAKASMLLQ+VPPA+L+RFLR
Sbjct: 418 MGSDGVEDVTIAINSSPNKHFGSQVNASNGLTTLGGGIPCAKASMLLQNVPPALLVRFLR 477

Query: 489 EHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLEN 547
           EHRSEWADS+IDAYSAAA+KA P S+P  RAG F G QVILPLAHT+EHEEFLEVIKLE 
Sbjct: 478 EHRSEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEG 537

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
               +E+ ++  D+FLLQLCSG+DENA G CAELVFAPID SF+DDAP++PSGFR+IPL+
Sbjct: 538 HGLTQEEAVLSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLE 597

Query: 608 SGKD-TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVA 666
           S  D +  PNRTLDLASALEVG  G + SGDS     + +SV+TIAFQF +E HL+ENVA
Sbjct: 598 SRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGAN-SNLRSVLTIAFQFTYESHLRENVA 656

Query: 667 SMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +MARQYVR ++ASVQRVA+AL+PSR  S+ G RPPPG+PEA TLARWICQSYR
Sbjct: 657 AMARQYVRTVVASVQRVAMALAPSRLSSHVGPRPPPGTPEALTLARWICQSYR 709


>gi|90110452|gb|ABD90528.1| class III homeodomain-leucine zipper [Pseudotsuga menziesii]
          Length = 840

 Score = 1070 bits (2767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/705 (71%), Positives = 594/705 (84%), Gaps = 7/705 (0%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
            Q   M+ GKYVRYT EQVEALERLY++CPKPSS+RRQQLIRECPILS+IEPKQIKVWFQ
Sbjct: 8   AQSCAMEAGKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQ 67

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRK ASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQQ Q   ++
Sbjct: 68  NRRCREKQRKGASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQIQTV-SI 126

Query: 137 ATTDTSCESVVTSG--QHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 194
           ATTDTSCESVVTSG  QHHLTPQ    HPPRDA+PAG LSIAEETLT+FLSKAT TAV+W
Sbjct: 127 ATTDTSCESVVTSGPHQHHLTPQ----HPPRDANPAGFLSIAEETLTQFLSKATETAVDW 182

Query: 195 VQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVV 254
           +QMPGMKPGPDSIGIV IS+ CTG+AARACG  GL+P++VA+ILKDRP+W  DCR ++V+
Sbjct: 183 IQMPGMKPGPDSIGIVTISNSCTGIAARACGFAGLEPSKVADILKDRPAWLHDCRCLDVL 242

Query: 255 NVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSM 314
              PTG  GTIELLY Q+YAPTTLAPARD W LRYTS+LEDGSLVVCERSL  TQ+GP+M
Sbjct: 243 TAFPTGKGGTIELLYTQMYAPTTLAPARDLWTLRYTSLLEDGSLVVCERSLTGTQSGPNM 302

Query: 315 PQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTT 374
           P   HFVRA+MLPSGYLIRPCEGGG IIHIVDHMDLEPW+VPEV+RPLYESS ++AQK T
Sbjct: 303 PSVQHFVRAQMLPSGYLIRPCEGGGCIIHIVDHMDLEPWTVPEVIRPLYESSAVLAQKMT 362

Query: 375 MAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           + ALRHLRQ++QEVS   V GWGR+PAALRA SQRL RGFN+A+NGF D+GWS+L SDG+
Sbjct: 363 ITALRHLRQVAQEVSGEVVLGWGRQPAALRAFSQRLCRGFNDAVNGFVDDGWSLLGSDGV 422

Query: 435 DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEW 494
           +DV + +NSSP+K++G QL+  +G  +++  +LCAKASMLLQ+VPPA+L+RFLREHRSEW
Sbjct: 423 EDVIIAINSSPNKLLGSQLASSDGLSALNGGILCAKASMLLQNVPPALLVRFLREHRSEW 482

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           AD +IDAYS+A +KA   ++P    G  G QVILPLAHT+EHEEFLEVIKLE      E+
Sbjct: 483 ADCNIDAYSSATMKANAFNVPGSLGGITGSQVILPLAHTVEHEEFLEVIKLEGHGLTHEE 542

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPS 614
            ++  D+FLLQLCSG+DE A G CA+L FAPIDASF+DDAP++PSGFR+IPL+SG DT  
Sbjct: 543 ALLSKDMFLLQLCSGIDEQAAGFCAQLAFAPIDASFADDAPLLPSGFRVIPLESGSDTSP 602

Query: 615 PNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVR 674
           PNRTLDLASALEVG  G +ASGD      + +SV+TIAFQF ++ H+++NVASMARQYVR
Sbjct: 603 PNRTLDLASALEVGSAGARASGDCGDSPYNLRSVLTIAFQFTYQNHVRDNVASMARQYVR 662

Query: 675 GIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
            +IASVQRV++AL+PS    + G RPPPG+PEA TL RWICQSYR
Sbjct: 663 HVIASVQRVSVALAPSLQSPHLGPRPPPGTPEALTLTRWICQSYR 707


>gi|89514871|gb|ABD75310.1| class III homeodomain-leucine zipper protein C3HDZ2 [Pseudotsuga
           menziesii]
          Length = 839

 Score = 1067 bits (2760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/708 (71%), Positives = 596/708 (84%), Gaps = 14/708 (1%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
            Q   M+ GKYVRYT EQVEALERLY++CPKPSS+RRQQLIRECPILS+IEPKQIKVWFQ
Sbjct: 8   AQSCAMEAGKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQ 67

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQQ Q   ++
Sbjct: 68  NRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQIQTV-SI 126

Query: 137 ATTDTSCESVVTSG--QHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 194
           ATTDTSCESVVTSG  QHHLTPQ    HPPRDA+PAG LSIAEETLT+FLSKAT TAV+W
Sbjct: 127 ATTDTSCESVVTSGPHQHHLTPQ----HPPRDANPAGFLSIAEETLTQFLSKATETAVDW 182

Query: 195 VQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVV 254
           +QMPGMKPGPDSIGIV IS+ CTG+AARACG  GL+P++VA+ILKDRP+W  DCR ++V+
Sbjct: 183 IQMPGMKPGPDSIGIVTISNSCTGIAARACGFAGLEPSKVADILKDRPAWLHDCRCLDVL 242

Query: 255 NVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSM 314
              PTG  GTIELLY Q+YAPTTLAPARD W LRYTS+LEDGSLVVCERSL  TQ+GP+M
Sbjct: 243 TAFPTGKGGTIELLYTQMYAPTTLAPARDLWTLRYTSLLEDGSLVVCERSLTGTQSGPNM 302

Query: 315 PQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTT 374
           P   HFVRA+MLPSGYLIRPCEGGG IIHIVDHMDLEPW+VPEV+RPLYESS ++AQK T
Sbjct: 303 PSVQHFVRAQMLPSGYLIRPCEGGGCIIHIVDHMDLEPWTVPEVIRPLYESSAVLAQKMT 362

Query: 375 MAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           + ALRHLRQ++QEVS   V GWGR+PAALRA SQRL RGFN+A+NGF D+GWS+L SDG+
Sbjct: 363 ITALRHLRQVAQEVSGEVVLGWGRQPAALRAFSQRLCRGFNDAVNGFVDDGWSLLGSDGV 422

Query: 435 DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEW 494
           +DV + +NS+P+K++G QL+  +G  +++  +LCAKASMLLQ+VPPA+ +RFLREHRSEW
Sbjct: 423 EDVIIAINSTPNKLLGSQLASSDGLSALNGGILCAKASMLLQNVPPALPVRFLREHRSEW 482

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           AD +IDAYS+A +KA   ++P    G  G QVILPLAHT+EHEEFLEVIKLE      E+
Sbjct: 483 ADCNIDAYSSATMKANAFNVPGSLGGITGSQVILPLAHTVEHEEFLEVIKLEGHGLTHEE 542

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPS 614
            ++  D+FLLQLCSG+DE A G CA+L FAPIDASF+DDAP++PSGFR+IPL+SG DT  
Sbjct: 543 ALLSKDMFLLQLCSGIDEQAAGFCAQLAFAPIDASFADDAPLLPSGFRVIPLESGSDTSP 602

Query: 615 PNRTLDLASALEVGPTGNKASGDSSTQCGST---KSVITIAFQFAFEMHLQENVASMARQ 671
           PNRTLDLASALEVG  G +ASGD    CG +   +SV+TIAFQF ++ H+++NVASMARQ
Sbjct: 603 PNRTLDLASALEVGSAGARASGD----CGDSPNLRSVLTIAFQFTYQNHVRDNVASMARQ 658

Query: 672 YVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           YVR +IASVQRV++AL+PS    + G RPPPG+PEA TL RWICQSYR
Sbjct: 659 YVRHVIASVQRVSVALAPSLQSPHLGPRPPPGTPEALTLTRWICQSYR 706


>gi|110349552|gb|ABG73251.1| class III HD-Zip protein HDZ32 [Ginkgo biloba]
          Length = 779

 Score = 1061 bits (2744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/650 (77%), Positives = 571/650 (87%), Gaps = 8/650 (1%)

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA 133
           WFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQQ QNA
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQLQNA 60

Query: 134 ATLATTDTSCESVVTSGQHHLTPQQQH---QHPPRDASPAGLLSIAEETLTEFLSKATGT 190
            ++ATTDTSCESVVTSGQH    QQ H   +HPPRDASPAGLLSIAEETLTEFLSKATGT
Sbjct: 61  -SIATTDTSCESVVTSGQHQ---QQNHLTARHPPRDASPAGLLSIAEETLTEFLSKATGT 116

Query: 191 AVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRS 250
           AVEW+QMPGMKPGPDSIGIVAISHGCTGVAARACGLVG++PT+VAEILKDRPSW+RDCR 
Sbjct: 117 AVEWIQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGIEPTKVAEILKDRPSWFRDCRC 176

Query: 251 VEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQN 310
           V+V+    TG+ GT+ELLYMQ+YAPTTLA ARDFW LRYTSVLEDGSLVVCERSL+ TQ 
Sbjct: 177 VDVLTAFSTGNGGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQG 236

Query: 311 GPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIA 370
           GPSMP   HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++A
Sbjct: 237 GPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLA 296

Query: 371 QKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
           QK TMAALRHLRQI+QEVS   V GWGR+PAALR  SQRL +GFNEA+NGFTD+GWS++ 
Sbjct: 297 QKMTMAALRHLRQIAQEVSCDVVLGWGRQPAALRTFSQRLGKGFNEAVNGFTDDGWSLMG 356

Query: 431 SDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH 490
           +DG DDVT+ +NSSP+K++G QL+   GFP++   +LCAKASMLLQ+VPPA+L+RFLREH
Sbjct: 357 NDGTDDVTILINSSPNKILGSQLASSEGFPALGGGILCAKASMLLQNVPPALLVRFLREH 416

Query: 491 RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMA 549
           RSEWADS+IDAYSAAA+KA PCS+P  R G F GGQVILPLAHT+EHEEFLEVIKLE   
Sbjct: 417 RSEWADSNIDAYSAAALKASPCSVPSSRIGGFGGGQVILPLAHTVEHEEFLEVIKLEGNG 476

Query: 550 HYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSG 609
             +E+ ++  ++FLLQLCSGVDENAVG CAELVFAPIDASF+D+AP++PSGFR+IPLDSG
Sbjct: 477 LTQEEALLSREMFLLQLCSGVDENAVGACAELVFAPIDASFADNAPLLPSGFRVIPLDSG 536

Query: 610 KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMA 669
            D  SPNRTLDLASALE+GP G + SGD     G+ +SV+TIAFQF +E HL+ENVASMA
Sbjct: 537 VDGSSPNRTLDLASALEIGPAGTRVSGDYGGNSGNLRSVLTIAFQFTYEDHLRENVASMA 596

Query: 670 RQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           RQYVR ++ASVQRVA+AL+PSR  S+ G RPPPG+PEA TLARWIC SYR
Sbjct: 597 RQYVRSVVASVQRVAMALAPSRLSSHLGPRPPPGTPEALTLARWICHSYR 646


>gi|383212093|dbj|BAM08933.1| class III homeobox-leucine zipper protein [Asparagus asparagoides]
          Length = 849

 Score = 1056 bits (2732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/725 (70%), Positives = 602/725 (83%), Gaps = 15/725 (2%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           M  V +G  ++ + S  Q   +D GKYVRYTPEQVEALER+Y ECPKPSSMRRQQLIREC
Sbjct: 1   MAMVVAGQGQNGKSSQQQ---IDAGKYVRYTPEQVEALERVYSECPKPSSMRRQQLIREC 57

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           PILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV
Sbjct: 58  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 117

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEET 179
           Y+N + RQQ     T+ATTDTSCESVVTSGQHH       QHP RDA+ PAGLL+IAEET
Sbjct: 118 YDNGYMRQQIH---TVATTDTSCESVVTSGQHHQQQNPTPQHPQRDANNPAGLLAIAEET 174

Query: 180 LTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILK 239
           L EFLSKATGTAVEWVQM GMKPGPDSIGI+A+SH C+GVAARACGLV L+PT+VAEILK
Sbjct: 175 LAEFLSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILK 234

Query: 240 DRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLV 299
           DRPSWYRDCRS++V+ V+PTG+ G IEL+YMQ YAPTTLA ARDFW LRYT+ LEDGSLV
Sbjct: 235 DRPSWYRDCRSLDVLTVIPTGNGGNIELMYMQTYAPTTLASARDFWTLRYTTGLEDGSLV 294

Query: 300 VCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL 359
           +CERSL  +  GP+ P A  FVRAEMLPSGYLIRPCEGGGS+IHIVDHMDL+ WSVPEVL
Sbjct: 295 ICERSLTPSTGGPAGPPASGFVRAEMLPSGYLIRPCEGGGSMIHIVDHMDLDAWSVPEVL 354

Query: 360 RPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALN 419
           RPLYES  ++AQK T+AAL H+RQI+QE S     G GR+PA LR  SQRLS+GFN+A+N
Sbjct: 355 RPLYESPKILAQKMTIAALHHIRQIAQETSGEIAYGGGRQPAVLRTFSQRLSKGFNDAVN 414

Query: 420 GFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNG--FPSMSNAVLCAKASMLLQD 477
           GFTD GWS+L SDG++DVT+ +NSSP+K+ G   S+ N   F  +   +LCAKASMLLQ+
Sbjct: 415 GFTDNGWSLLGSDGVEDVTIMINSSPNKLFG---SHANSSIFSPIGGGILCAKASMLLQN 471

Query: 478 VPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRA--GNFGGQVILPLAHTIE 535
           VPPA+L+RFLREHRSEWAD  +DAYSAA+++A P ++P  RA  G  GGQVILPLAHTIE
Sbjct: 472 VPPALLVRFLREHRSEWADCGVDAYSAASLRASPYAVPGLRASSGFMGGQVILPLAHTIE 531

Query: 536 HEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAP 595
           HEEFLEVI+LE     ++D+IM  D+FLLQLCSGVDEN+VG CA+LVFAPID SF+DDAP
Sbjct: 532 HEEFLEVIRLEGHGFTQDDVIMARDMFLLQLCSGVDENSVGACAQLVFAPIDESFADDAP 591

Query: 596 IIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGP-TGNKASGDSSTQCGSTKSVITIAFQ 654
           ++PSGFRIIPLD   D+P+  RTLDLAS LEVGP +  +++ D+++   + +SV+TIAFQ
Sbjct: 592 LLPSGFRIIPLDPKTDSPAATRTLDLASTLEVGPGSAARSASDNASNAYNLRSVLTIAFQ 651

Query: 655 FAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWI 714
           F FE HL++NVA+MARQYVR ++ASVQRVA+A++PSR GS  G++ PPGSPEA TLARWI
Sbjct: 652 FTFENHLRDNVAAMARQYVRSVVASVQRVAMAIAPSRLGSQLGVKHPPGSPEAQTLARWI 711

Query: 715 CQSYR 719
            +SYR
Sbjct: 712 SRSYR 716


>gi|383212095|dbj|BAM08934.1| class III homeobox-leucine zipper protein [Asparagus officinalis]
          Length = 849

 Score = 1053 bits (2722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 505/704 (71%), Positives = 594/704 (84%), Gaps = 12/704 (1%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 19  IDAGKYVRYTPEQVEALERVYSECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 78

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY+N + RQQ     T+ATTDT
Sbjct: 79  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYDNGYMRQQIH---TVATTDT 135

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
           SCESVVTSGQHH       QHP RDA+ PAGLL+IAEETL EFLSKATGTAVEWVQM GM
Sbjct: 136 SCESVVTSGQHHQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVEWVQMVGM 195

Query: 201 KPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTG 260
           KPGPDSIGI+A+SH C+GVAARACGLV L+PT+VAEILKDRPSWYRDCRS++V+ V+PTG
Sbjct: 196 KPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRSLDVLTVIPTG 255

Query: 261 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHF 320
           + G IEL+YMQ YAPTTLA ARDFW LRYT+ LEDGSLV+CERSL  +  GP+ P A  F
Sbjct: 256 NGGNIELMYMQTYAPTTLASARDFWTLRYTTGLEDGSLVICERSLTPSTGGPAGPPASGF 315

Query: 321 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH 380
           VRAEMLPSGYLIRPCEGGGS+IHIVDHMDL+ WSVPEVLRPLYES  ++AQK T+AAL H
Sbjct: 316 VRAEMLPSGYLIRPCEGGGSMIHIVDHMDLDAWSVPEVLRPLYESPKILAQKMTIAALHH 375

Query: 381 LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
           +RQI+QE S     G GR+PA LR  SQRLS+GFN+A+NGFTD+GWS+L SDG++DVT+ 
Sbjct: 376 IRQIAQETSGEIAYGGGRQPAVLRTFSQRLSKGFNDAVNGFTDDGWSLLGSDGVEDVTIM 435

Query: 441 VNSSPSKMMGVQLSYVNG--FPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSS 498
           +NSSP+K+ G   S+ N   F  +   +LCAKASMLLQ+VPPA+L+RFLREHRSEWAD  
Sbjct: 436 INSSPNKLFG---SHANSSIFSPIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADCG 492

Query: 499 IDAYSAAAVKAGPCSLPVPRAGN--FGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
           +DAYSAA+++A P ++P  RA N   GGQVILPLAHT+EHEEFLEVI+LE     ++D+I
Sbjct: 493 VDAYSAASLRASPYAVPGLRASNGFMGGQVILPLAHTVEHEEFLEVIRLEGHGFTQDDVI 552

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPN 616
           M  D+FLLQLCSGVDEN+VG CA+LVFAPID SF+DDAP++PSGFRIIPLD   D+P+  
Sbjct: 553 MSRDMFLLQLCSGVDENSVGACAQLVFAPIDESFADDAPLLPSGFRIIPLDPKTDSPAAT 612

Query: 617 RTLDLASALEVGP-TGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRG 675
           RTLDLAS LEVGP +  +++ D+++   + +SV+TIAFQF FE HL++NVA+MARQYVR 
Sbjct: 613 RTLDLASTLEVGPGSAARSASDNASNAYNLRSVLTIAFQFTFENHLRDNVAAMARQYVRS 672

Query: 676 IIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           ++ASVQRVA+A++PSR G+  G++ PPGSPEA TLARWI +SYR
Sbjct: 673 VVASVQRVAMAIAPSRLGTQLGVKHPPGSPEAQTLARWISRSYR 716


>gi|317160482|gb|ADV04323.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 836

 Score = 1050 bits (2716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/705 (71%), Positives = 589/705 (83%), Gaps = 11/705 (1%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
            Q   M+ GKYVRYT EQVEALERLY++CPKPSS+RRQQLIRECPILS+IEPKQIKVWFQ
Sbjct: 8   AQSCGMEAGKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQ 67

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQQ Q   ++
Sbjct: 68  NRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQIQTV-SI 126

Query: 137 ATTDTSCESVVTSGQH--HLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 194
           ATTDTSCESVVTSG H  HLTPQ    HPPRDASPAG LSIAEETLT+ LSKAT TAV+W
Sbjct: 127 ATTDTSCESVVTSGPHPHHLTPQ----HPPRDASPAGFLSIAEETLTQLLSKATETAVDW 182

Query: 195 VQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVV 254
           +QMPGMKPGPDSIGIV IS+ CTGVAARACG  GL+P++VA+ILKDRP+W  DCR + V+
Sbjct: 183 IQMPGMKPGPDSIGIVTISNSCTGVAARACGFAGLEPSKVADILKDRPAWLHDCRCLNVL 242

Query: 255 NVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSM 314
              PTG  GT+E+LY Q+YAPTTLAPARD   LRYTS+LEDGSLVVCERSL   Q+GP+M
Sbjct: 243 TAFPTGKGGTVEVLYTQMYAPTTLAPARDLLTLRYTSLLEDGSLVVCERSLTGIQSGPNM 302

Query: 315 PQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTT 374
           P   HFVRA+MLPSGYLIRPCEGGG IIHIVDHMDLEPWSVPEV+RPLYESS ++A + T
Sbjct: 303 PSVQHFVRAQMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVIRPLYESSAVLATRVT 362

Query: 375 MAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           + ALRHLRQ++QEVS   V GWGR+PAALRA SQRL RGFN+A+NGF D+GWS+L SDG+
Sbjct: 363 ITALRHLRQVAQEVSGEVVLGWGRQPAALRAFSQRLCRGFNDAVNGFVDDGWSLLGSDGV 422

Query: 435 DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEW 494
           +DV + +NSSPSK +G QL+  +G  +++  +LCAKASMLLQ+VPPA+L+RFLREHRSEW
Sbjct: 423 EDVIIAINSSPSKFLGSQLASSDGISALNGGILCAKASMLLQNVPPALLVRFLREHRSEW 482

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           AD ++DAYS+A +KA   ++P    G  G QVILPLAHT+EHEEFLEVIKLE      E+
Sbjct: 483 ADCNVDAYSSATMKANAYNVPGSLGGITGSQVILPLAHTVEHEEFLEVIKLEGQGLTHEE 542

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPS 614
            ++  D+FLLQLCSG+DE+AVG CA+LVFAPIDASF+DDAP++PSGFR+IPL+SG D   
Sbjct: 543 ALLSKDMFLLQLCSGIDEHAVGFCAQLVFAPIDASFADDAPLLPSGFRVIPLESGSDASP 602

Query: 615 PNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVR 674
           PNRTLDLASALEVG  G +ASGD      + +SV+TIAFQF ++ H++++VA+MARQYVR
Sbjct: 603 PNRTLDLASALEVGSAGTRASGDCGDSPYNLRSVLTIAFQFTYQNHVRDSVAAMARQYVR 662

Query: 675 GIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
            +IASVQRVA+AL+PS    +    PPPG+PEA TLARWIC+SYR
Sbjct: 663 HVIASVQRVAIALAPSLQSPH----PPPGTPEALTLARWICESYR 703


>gi|359483940|ref|XP_002281868.2| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 1
           [Vitis vinifera]
 gi|147820218|emb|CAN73584.1| hypothetical protein VITISV_033098 [Vitis vinifera]
 gi|297740817|emb|CBI30999.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score = 1049 bits (2713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 505/703 (71%), Positives = 588/703 (83%), Gaps = 4/703 (0%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K  MD+ KYVRYTPEQVEALER+Y ECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 10  KQQMDSSKYVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 69

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN + RQQ Q+A+T AT
Sbjct: 70  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQSAST-AT 128

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQM 197
           TDTSCESVV SGQH        QHP RDAS PAGLL+IAEETL EFLSKATGTAV+WVQM
Sbjct: 129 TDTSCESVVMSGQHQQQQNPTPQHPQRDASNPAGLLAIAEETLAEFLSKATGTAVDWVQM 188

Query: 198 PGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVL 257
            GMKPGPDSIGIVA+S  C+GVAARACGLV L+PT+VAEILKDRPSW+RDCR ++V++V+
Sbjct: 189 IGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCRCLDVLSVI 248

Query: 258 PTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQA 317
           PTG+ GTIEL+YMQ YAPTTLA ARDFW LRYT+ LEDGSLV+CERSL ++  GP+ P A
Sbjct: 249 PTGNGGTIELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPA 308

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
             ++RAEMLPSGYLIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS ++AQKTT+AA
Sbjct: 309 SSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKTTVAA 368

Query: 378 LRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           LRH+RQI+QE S     G GR+PA LR  SQRL RGFN+A+NGF D+GWS++ SDG++DV
Sbjct: 369 LRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFADDGWSLMGSDGVEDV 428

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADS 497
           T+ +NSSPSK +G Q +    FP+    VLCAKASMLLQ+VPPA+L+RFLREHRSEWAD 
Sbjct: 429 TIVINSSPSKFLGPQYNSTM-FPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADY 487

Query: 498 SIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
            +DAYSAA +KA P  +P  R G F   QVILPLAHT+EHEEFLEV++LE  A   ED+ 
Sbjct: 488 GVDAYSAACLKASPYEVPCARPGGFPSSQVILPLAHTVEHEEFLEVVRLEGHAFSPEDVA 547

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPN 616
           +  D++LLQLCSGVDENA G CA+LVFAPID SF+DDAP++PSGFR+IPLD   D P+  
Sbjct: 548 LTRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKTDGPAAT 607

Query: 617 RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGI 676
           RTLDLAS LEVG  G + + +S     + +SV+TIAFQF FE H+++NVA+MARQYVR +
Sbjct: 608 RTLDLASTLEVGAGGARPANESDLNNYNLRSVLTIAFQFTFENHVRDNVAAMARQYVRSV 667

Query: 677 IASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +ASVQRVA+A++PSR  S+ GL+P PGSPEA TLARWIC+SYR
Sbjct: 668 MASVQRVAMAIAPSRLSSHMGLKPLPGSPEALTLARWICRSYR 710


>gi|242033571|ref|XP_002464180.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
 gi|241918034|gb|EER91178.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
          Length = 854

 Score = 1046 bits (2704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 505/721 (70%), Positives = 598/721 (82%), Gaps = 5/721 (0%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M V  GG   S   GG    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 3   MVVVGGGKDRSSPGGGGAPQVDTGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECP 62

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS+LVY
Sbjct: 63  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVY 122

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETL 180
           EN + RQQ  N +  ATTDTSCESVVTSGQHH         P RDA+ PAGLL+IAEETL
Sbjct: 123 ENGYMRQQLHNPSA-ATTDTSCESVVTSGQHHQQQNPAAPRPQRDANNPAGLLAIAEETL 181

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
            EFLSKATGTAV+WVQM GMKPGPDSIGI+A+SH C+GVAARACGLV L+PT+VAEILKD
Sbjct: 182 AEFLSKATGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKD 241

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSWYRDCR V++++V+PTG+ GTIEL+YMQ YAPTTLA  RDFW LRYTS LEDGSLV+
Sbjct: 242 RPSWYRDCRCVDILHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGSLVI 301

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSL  +  GPS P  P+FVRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLR
Sbjct: 302 CERSLTQSTGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLR 361

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYES  ++AQKTT+AALRH+RQI+ E S     G GR+PA LR  SQRLSRGFN+A+NG
Sbjct: 362 PLYESPKILAQKTTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNG 421

Query: 421 FTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
           F D+GWS++ SDG +DVT+ +NSSP+K++G  ++    F ++   +LCAKASMLLQ+VPP
Sbjct: 422 FPDDGWSLMSSDGAEDVTIAINSSPNKLIGPHVNSSQLFTTIGGGILCAKASMLLQNVPP 481

Query: 481 AILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEF 539
           A+L+RFLREHRSEWAD  +DAYSAAA++A P ++P  RA  F G QVILPLAHT+EHEEF
Sbjct: 482 ALLVRFLREHRSEWADPGVDAYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEF 541

Query: 540 LEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPS 599
           LEVI+LE  +   +++++  D++LLQLCSGVDENA G CA+LVFAPID SF+DDAP++PS
Sbjct: 542 LEVIRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPS 601

Query: 600 GFRIIPLDSGKDTPSPNRTLDLASALEVGPTG-NKASGDSSTQCGSTKSVITIAFQFAFE 658
           GFR+IPLD+  D PS  RTLDLAS LEVG  G  +AS D+S+ C +T+SV+TIAFQF++E
Sbjct: 602 GFRVIPLDAKTDPPSGTRTLDLASTLEVGSGGTTRASSDASSTC-NTRSVLTIAFQFSYE 660

Query: 659 MHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
            HL+E+VA+MARQYVR ++ASVQRVA+A++PSR G    ++  PGSPEAHTLARWI +SY
Sbjct: 661 NHLRESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQLEMKQTPGSPEAHTLARWIGRSY 720

Query: 719 R 719
           R
Sbjct: 721 R 721


>gi|187609448|sp|A2XK30.1|HOX32_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
           Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
           transcription factor HOX32; AltName: Full=OsHox32
 gi|125545051|gb|EAY91190.1| hypothetical protein OsI_12798 [Oryza sativa Indica Group]
          Length = 859

 Score = 1045 bits (2703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/718 (70%), Positives = 597/718 (83%), Gaps = 7/718 (0%)

Query: 7   GGSRDSRDS--GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILS 64
           G  R  R S  GG    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILS
Sbjct: 11  GVGRQDRSSPGGGGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILS 70

Query: 65  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT 124
           NIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS+LVYEN 
Sbjct: 71  NIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENG 130

Query: 125 FFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEF 183
           + RQQ  N  ++ATTDTSCESVVTSGQHH         P RDA+ PAGLL+IAEETL EF
Sbjct: 131 YMRQQLHNP-SVATTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLAIAEETLAEF 189

Query: 184 LSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPS 243
           LSKATGTAV+WVQM GMKPGPDSIGI+A+SH C+GVAARACGLV L+PT+VAEILKDRPS
Sbjct: 190 LSKATGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPS 249

Query: 244 WYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCER 303
           WYRDCR V+V++V+PTG+ GTIEL+YMQ YAPTTLA  RDFW+LRYTS LEDGSLV+CER
Sbjct: 250 WYRDCRCVDVLHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICER 309

Query: 304 SLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 363
           SL  +  GPS P  P+FVRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLY
Sbjct: 310 SLTQSTGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLY 369

Query: 364 ESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTD 423
           ES  ++AQK T+AALRH+RQI+ E S     G GR+PA LR  SQRLSRGFN+A+NGF D
Sbjct: 370 ESPKILAQKMTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPD 429

Query: 424 EGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAIL 483
           +GWS++ SDG +DVT+  NSSP+K++G  ++    F ++   +LCAKASMLLQ+VPPA+L
Sbjct: 430 DGWSLMSSDGAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALL 489

Query: 484 LRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEV 542
           +RFLREHRSEWAD  +DAYSAAA++A P ++P  RAG F G QVILPLAHT+EHEEFLEV
Sbjct: 490 VRFLREHRSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEV 549

Query: 543 IKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFR 602
           I+LE  +   +++++  D++LLQLCSGVDENA G CA+LVFAPID SF+DDAP++PSGFR
Sbjct: 550 IRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFR 609

Query: 603 IIPLDSGKDTPSPNRTLDLASALEVGPTG-NKASGDSSTQCGSTKSVITIAFQFAFEMHL 661
           +IPLD   D PS  RTLDLAS LEVG  G  +AS D+S+ C +T+SV+TIAFQF++E HL
Sbjct: 610 VIPLDGKTDAPSATRTLDLASTLEVGSGGTTRASSDTSSTC-NTRSVLTIAFQFSYENHL 668

Query: 662 QENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +E+VA+MARQYVR ++ASVQRVA+A++PSR G     + PPGSPEAHTLARWI +SYR
Sbjct: 669 RESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYR 726


>gi|115454289|ref|NP_001050745.1| Os03g0640800 [Oryza sativa Japonica Group]
 gi|75119691|sp|Q6AST1.1|HOX32_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
           Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
           transcription factor HOX32; AltName: Full=OsHox32
 gi|50881435|gb|AAT85280.1| homeobox leucine-zipper protein, putative [Oryza sativa Japonica
           Group]
 gi|108710033|gb|ABF97828.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113549216|dbj|BAF12659.1| Os03g0640800 [Oryza sativa Japonica Group]
 gi|215737063|dbj|BAG95992.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 859

 Score = 1045 bits (2702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/718 (70%), Positives = 597/718 (83%), Gaps = 7/718 (0%)

Query: 7   GGSRDSRDS--GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILS 64
           G  R  R S  GG    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILS
Sbjct: 11  GVGRQDRSSPGGGGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILS 70

Query: 65  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT 124
           NIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS+LVYEN 
Sbjct: 71  NIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENG 130

Query: 125 FFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEF 183
           + RQQ  N  ++ATTDTSCESVVTSGQHH         P RDA+ PAGLL+IAEETL EF
Sbjct: 131 YMRQQLHNP-SVATTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLAIAEETLAEF 189

Query: 184 LSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPS 243
           LSKATGTAV+WVQM GMKPGPDSIGI+A+SH C+GVAARACGLV L+PT+VAEILKDRPS
Sbjct: 190 LSKATGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPS 249

Query: 244 WYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCER 303
           WYRDCR V+V++V+PTG+ GTIEL+YMQ YAPTTLA  RDFW+LRYTS LEDGSLV+CER
Sbjct: 250 WYRDCRCVDVLHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICER 309

Query: 304 SLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 363
           SL  +  GPS P  P+FVRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLY
Sbjct: 310 SLTQSTGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLY 369

Query: 364 ESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTD 423
           ES  ++AQK T+AALRH+RQI+ E S     G GR+PA LR  SQRLSRGFN+A+NGF D
Sbjct: 370 ESPKILAQKMTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPD 429

Query: 424 EGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAIL 483
           +GWS++ SDG +DVT+  NSSP+K++G  ++    F ++   +LCAKASMLLQ+VPPA+L
Sbjct: 430 DGWSLMSSDGAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALL 489

Query: 484 LRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEV 542
           +RFLREHRSEWAD  +DAYSAAA++A P ++P  RAG F G QVILPLAHT+EHEEFLEV
Sbjct: 490 VRFLREHRSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEV 549

Query: 543 IKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFR 602
           I+LE  +   +++++  D++LLQLCSGVDENA G CA+LVFAPID SF+DDAP++PSGFR
Sbjct: 550 IRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFR 609

Query: 603 IIPLDSGKDTPSPNRTLDLASALEVGPTG-NKASGDSSTQCGSTKSVITIAFQFAFEMHL 661
           +IPLD   D PS  RTLDLAS LEVG  G  +AS D+S+ C +T+SV+TIAFQF++E HL
Sbjct: 610 VIPLDGKTDAPSATRTLDLASTLEVGSGGTTRASSDTSSTC-NTRSVLTIAFQFSYENHL 668

Query: 662 QENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +E+VA+MARQYVR ++ASVQRVA+A++PSR G     + PPGSPEAHTLARWI +SYR
Sbjct: 669 RESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYR 726


>gi|326517046|dbj|BAJ96515.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 845

 Score = 1045 bits (2701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/704 (71%), Positives = 595/704 (84%), Gaps = 10/704 (1%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+REC +L++++PKQIKVWFQNRRCR
Sbjct: 15  MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLASVDPKQIKVWFQNRRCR 74

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKE+ RLQ++NRKL AMNKLLMEENDRLQKQVS LVYEN ++RQQT +A  LATTDT
Sbjct: 75  EKQRKESGRLQSLNRKLAAMNKLLMEENDRLQKQVSHLVYENGYYRQQTHSAG-LATTDT 133

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 201
           SCESVVTSGQ ++          RDASPAGL+SIAEETLTEFLSKATGTAVEWVQMPGMK
Sbjct: 134 SCESVVTSGQQNVVAVPPPPP--RDASPAGLMSIAEETLTEFLSKATGTAVEWVQMPGMK 191

Query: 202 PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS 261
           PGPDSIGI+AISHGC GVAARACGLVG++P +VA+ILKDRP W RDCRS+E+VNVLP GS
Sbjct: 192 PGPDSIGIIAISHGCAGVAARACGLVGMEPAKVADILKDRPLWLRDCRSMEIVNVLPAGS 251

Query: 262 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 321
           +GTIELLYMQLYAPTTLAPARDFWL+RYTS+L+DGSLVVCERSL++ Q GPSMP    FV
Sbjct: 252 NGTIELLYMQLYAPTTLAPARDFWLMRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFV 311

Query: 322 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL 381
           R EMLPSG+LIRP +GGGS+IHIVDH+DLEPWSVPEV+RPLYESS ++AQK +MAALR+L
Sbjct: 312 RGEMLPSGFLIRPSDGGGSVIHIVDHLDLEPWSVPEVVRPLYESSAMVAQKMSMAALRYL 371

Query: 382 RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV 441
           RQ++ E +   +TGWGR+PAALRALSQ+L+RGFNE L G  D+GWS++ESDG+DDV + V
Sbjct: 372 RQVAHEDTHSVITGWGRQPAALRALSQKLTRGFNETLGGLADDGWSVIESDGVDDVCISV 431

Query: 442 NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDA 501
           NSSPSK+M    ++ +G P +S  VLCAKASMLLQDV P  LLRFLREHRS+WADSS+DA
Sbjct: 432 NSSPSKLMSCNATFSDGLPMVSTGVLCAKASMLLQDVSPPSLLRFLREHRSQWADSSLDA 491

Query: 502 YSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDI 561
           + A+A+K   C+LPV R G F GQVILPLAHT + EEFLEVIK+ N ++Y +D +M  D+
Sbjct: 492 FFASALKPNFCNLPVSRLGGFSGQVILPLAHTFDPEEFLEVIKIGNASNY-QDTLMHRDL 550

Query: 562 FLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDL 621
           FLLQ+ +GVDEN +G C+EL+FAPIDASFSDD+P++PSGFRIIP++S  DTPSPN TLDL
Sbjct: 551 FLLQMYNGVDENTIGTCSELIFAPIDASFSDDSPLLPSGFRIIPIESPLDTPSPNCTLDL 610

Query: 622 ASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQ 681
           AS LEVG  G++ +G S +    +K+V+TIAFQFAFE HLQ++VA MARQY+R II+SVQ
Sbjct: 611 ASTLEVGTPGSRITGHSRS---GSKAVMTIAFQFAFESHLQDSVAVMARQYMRSIISSVQ 667

Query: 682 RVALALSPSRFGSNAGLR-PPPGSPEAHTLARWICQSYRCVFYF 724
           R+ALALS S    +   R  PP +PEA TL+RWI QSYR  F+F
Sbjct: 668 RIALALSSSHLVPHGSSRLAPPVTPEAATLSRWIVQSYR--FHF 709


>gi|110349544|gb|ABG73247.1| class III HD-Zip protein HDZ33 [Pinus taeda]
          Length = 840

 Score = 1043 bits (2696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/705 (70%), Positives = 586/705 (83%), Gaps = 7/705 (0%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
            Q   M+ GKYVRYT EQVEALERLY++CPKPSS+RRQQLIRECPILS+IEPKQIKVWFQ
Sbjct: 8   AQSFGMEAGKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQ 67

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQQ Q   ++
Sbjct: 68  NRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQIQTV-SI 126

Query: 137 ATTDTSCESVVTSGQH--HLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 194
            TTDTSCESVVTSG H  HLTPQ    HPPRDASPAG LSIAEETLT+FLSKAT TAV+W
Sbjct: 127 TTTDTSCESVVTSGPHPHHLTPQ----HPPRDASPAGFLSIAEETLTQFLSKATETAVDW 182

Query: 195 VQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVV 254
           +QMPGMKPGPDSIGIV IS+ CTGVAARACG  GL+P++VA+ILKDRP+W  DCR ++V+
Sbjct: 183 IQMPGMKPGPDSIGIVTISNSCTGVAARACGFAGLEPSKVADILKDRPAWLHDCRRLDVL 242

Query: 255 NVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSM 314
              PTG  G  ELLY Q+YAPTTLAPARD   LRYTS+LEDGSLVVCERSL  TQ+GP+M
Sbjct: 243 TAFPTGKGGAFELLYTQMYAPTTLAPARDLLTLRYTSLLEDGSLVVCERSLTGTQSGPNM 302

Query: 315 PQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTT 374
           P   HFVR +MLPSGYLIRPCEGGG IIHIVDHMDLEPWSVPEV+RPLYESS ++AQK T
Sbjct: 303 PPVQHFVRTQMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVIRPLYESSAVLAQKMT 362

Query: 375 MAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           + ALRHLRQ++QEVS   V GWGR+PAALRA SQRL RGFN+A+NGF D+GWS+L SDG+
Sbjct: 363 ITALRHLRQVAQEVSGEVVLGWGRQPAALRAFSQRLCRGFNDAVNGFADDGWSLLGSDGV 422

Query: 435 DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEW 494
           +DV + +NSSPSK +  Q++  +G  +++  ++CAKASMLLQ+VPPA+L+RFLREHRSEW
Sbjct: 423 EDVIIAINSSPSKFLSSQIASSDGLSALNGGIMCAKASMLLQNVPPALLVRFLREHRSEW 482

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           AD +IDAYS+A +KA   ++P    G  G QVILPLAHT+EHEEFLEVIKLE      E+
Sbjct: 483 ADCNIDAYSSATMKANAYNVPGSLGGITGSQVILPLAHTVEHEEFLEVIKLEGHGLTHEE 542

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPS 614
            ++  D+FLLQLCSG+DE+A G C++LVFAPIDASF+DDAP++PSGFR+IPL+SG D   
Sbjct: 543 ALLSKDMFLLQLCSGIDEHAAGFCSQLVFAPIDASFADDAPLLPSGFRVIPLESGSDVSP 602

Query: 615 PNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVR 674
           PNRTLDLASALE+G  G +ASGD      + +SV+TIAFQF ++ +++++VA+M RQYVR
Sbjct: 603 PNRTLDLASALEIGSAGTRASGDCGDSPCNLRSVLTIAFQFTYQNNVRDSVAAMTRQYVR 662

Query: 675 GIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
            +IASVQRVA+AL+PS+   + G R PPG+PEA TL RWI QSYR
Sbjct: 663 NVIASVQRVAIALAPSQQSPHIGPRLPPGTPEALTLTRWIFQSYR 707


>gi|359483942|ref|XP_003633040.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 2
           [Vitis vinifera]
          Length = 859

 Score = 1040 bits (2688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 505/717 (70%), Positives = 588/717 (82%), Gaps = 18/717 (2%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K  MD+ KYVRYTPEQVEALER+Y ECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 10  KQQMDSSKYVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 69

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN + RQQ Q+A+T AT
Sbjct: 70  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQSAST-AT 128

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQM 197
           TDTSCESVV SGQH        QHP RDAS PAGLL+IAEETL EFLSKATGTAV+WVQM
Sbjct: 129 TDTSCESVVMSGQHQQQQNPTPQHPQRDASNPAGLLAIAEETLAEFLSKATGTAVDWVQM 188

Query: 198 PGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVL 257
            GMKPGPDSIGIVA+S  C+GVAARACGLV L+PT+VAEILKDRPSW+RDCR ++V++V+
Sbjct: 189 IGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCRCLDVLSVI 248

Query: 258 PTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQA 317
           PTG+ GTIEL+YMQ YAPTTLA ARDFW LRYT+ LEDGSLV+CERSL ++  GP+ P A
Sbjct: 249 PTGNGGTIELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPA 308

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
             ++RAEMLPSGYLIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS ++AQKTT+AA
Sbjct: 309 SSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKTTVAA 368

Query: 378 LRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           LRH+RQI+QE S     G GR+PA LR  SQRL RGFN+A+NGF D+GWS++ SDG++DV
Sbjct: 369 LRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFADDGWSLMGSDGVEDV 428

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASML--------------LQDVPPAIL 483
           T+ +NSSPSK +G Q +    FP+    VLCAKASML              LQ+VPPA+L
Sbjct: 429 TIVINSSPSKFLGPQYNSTM-FPTFGGGVLCAKASMLLQVHRKSRQPCYLNLQNVPPALL 487

Query: 484 LRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEV 542
           +RFLREHRSEWAD  +DAYSAA +KA P  +P  R G F   QVILPLAHT+EHEEFLEV
Sbjct: 488 VRFLREHRSEWADYGVDAYSAACLKASPYEVPCARPGGFPSSQVILPLAHTVEHEEFLEV 547

Query: 543 IKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFR 602
           ++LE  A   ED+ +  D++LLQLCSGVDENA G CA+LVFAPID SF+DDAP++PSGFR
Sbjct: 548 VRLEGHAFSPEDVALTRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFR 607

Query: 603 IIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQ 662
           +IPLD   D P+  RTLDLAS LEVG  G + + +S     + +SV+TIAFQF FE H++
Sbjct: 608 VIPLDPKTDGPAATRTLDLASTLEVGAGGARPANESDLNNYNLRSVLTIAFQFTFENHVR 667

Query: 663 ENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +NVA+MARQYVR ++ASVQRVA+A++PSR  S+ GL+P PGSPEA TLARWIC+SYR
Sbjct: 668 DNVAAMARQYVRSVMASVQRVAMAIAPSRLSSHMGLKPLPGSPEALTLARWICRSYR 724


>gi|242051699|ref|XP_002454995.1| hypothetical protein SORBIDRAFT_03g002660 [Sorghum bicolor]
 gi|241926970|gb|EES00115.1| hypothetical protein SORBIDRAFT_03g002660 [Sorghum bicolor]
          Length = 844

 Score = 1039 bits (2687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/702 (71%), Positives = 596/702 (84%), Gaps = 7/702 (0%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+R+CP+L++++PKQIKVWFQNRRCREKQR
Sbjct: 16  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRDCPVLASVDPKQIKVWFQNRRCREKQR 75

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           KE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVYEN ++RQQTQ +A LATTDTSCES
Sbjct: 76  KESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYENGYYRQQTQQSAGLATTDTSCES 135

Query: 146 VVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 205
           VVTSG H        Q  PRDA PAGL+SIAEETLTEFLSKATGTAVEWVQMPGMKPGPD
Sbjct: 136 VVTSG-HQNVAAAAPQAQPRDAGPAGLMSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 194

Query: 206 SIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTI 265
           SIGI+AISHGC GVAARACGLVG++P +VAE+LKDR  W RDCRS+EVVNVLP G++GTI
Sbjct: 195 SIGIIAISHGCAGVAARACGLVGMEPAKVAEVLKDRLLWLRDCRSMEVVNVLPAGNNGTI 254

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           ELLY+QLYAPTTLAPARDFWLLRYTS+L+DGSLVVCERSL+  Q GPSMP    F+R EM
Sbjct: 255 ELLYLQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLSTKQGGPSMPLVQPFIRGEM 314

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQIS 385
           LPSG+LIRP +GGGS+IHIVDH+DLEPWSVPEV+RPLYESS ++AQK +MAALR+LRQ++
Sbjct: 315 LPSGFLIRPSDGGGSVIHIVDHIDLEPWSVPEVVRPLYESSAMVAQKMSMAALRYLRQVA 374

Query: 386 QEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSP 445
            E +   +TGWGR+PAALRALSQ+L+RGFNEALNG  D+GWS++ESDG+DDV + VNSSP
Sbjct: 375 HEDTHSVITGWGRQPAALRALSQKLTRGFNEALNGLADDGWSVVESDGVDDVCISVNSSP 434

Query: 446 SKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAA 505
           SK++    ++ NG P +S++VLCAKASMLLQDV P  LLRF+RE RS+WADS++DA+ A+
Sbjct: 435 SKVINCNATFNNGLPVVSSSVLCAKASMLLQDVSPPALLRFMREQRSQWADSNLDAFFAS 494

Query: 506 AVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQ 565
           A+K   C+LP+ R G F GQVILPLAHT + EEFLEVIKL N ++Y +D ++  D+FLLQ
Sbjct: 495 AMKPNFCNLPMSRLGGFSGQVILPLAHTFDPEEFLEVIKLGNASNY-QDALLHRDLFLLQ 553

Query: 566 LCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASAL 625
           + +GVDEN VG C+EL+FAPIDASFSDD+P++PSGFRIIP+D+  DT SP  TLDLAS L
Sbjct: 554 MYNGVDENMVGTCSELIFAPIDASFSDDSPLLPSGFRIIPIDAPLDTSSPKCTLDLASTL 613

Query: 626 EVGPTGNK--ASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRV 683
           EVG   ++   SG  +     +K+V+TI FQFAFE HLQ++VA+MARQY+R IIASVQR+
Sbjct: 614 EVGTPRSRINGSGPGNAASAGSKAVMTIVFQFAFESHLQDSVAAMARQYMRSIIASVQRI 673

Query: 684 ALALSPSRFGSN-AGLRPPPGSPEAHTLARWICQSYRCVFYF 724
           ALALS SR   + + +   P SPEA TLARWICQSYR  F+F
Sbjct: 674 ALALSSSRLVPHGSSISHTPASPEATTLARWICQSYR--FHF 713


>gi|359483944|ref|XP_003633041.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 3
           [Vitis vinifera]
          Length = 862

 Score = 1038 bits (2683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/705 (71%), Positives = 587/705 (83%), Gaps = 6/705 (0%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K  MD+ KYVRYTPEQVEALER+Y ECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 10  KQQMDSSKYVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 69

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN + RQQ Q+A+T AT
Sbjct: 70  RCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQSAST-AT 128

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQM 197
           TDTSCESVV SGQH        QHP RDAS PAGLL+IAEETL EFLSKATGTAV+WVQM
Sbjct: 129 TDTSCESVVMSGQHQQQQNPTPQHPQRDASNPAGLLAIAEETLAEFLSKATGTAVDWVQM 188

Query: 198 PGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVL 257
            GMKPGPDSIGIVA+S  C+GVAARACGLV L+PT+VAEILKDRPSW+RDCR ++V++V+
Sbjct: 189 IGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCRCLDVLSVI 248

Query: 258 PTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQA 317
           PTG+ GTIEL+YMQ YAPTTLA ARDFW LRYT+ LEDGSLV+CERSL ++  GP+ P A
Sbjct: 249 PTGNGGTIELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPA 308

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
             ++RAEMLPSGYLIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS ++AQKTT+AA
Sbjct: 309 SSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKTTVAA 368

Query: 378 LRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           LRH+RQI+QE S     G GR+PA LR  SQRL RGFN+A+NGF D+GWS++ SDG++DV
Sbjct: 369 LRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFADDGWSLMGSDGVEDV 428

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADS 497
           T+ +NSSPSK +G Q +    FP+    VLCAKASMLLQ+VPPA+L+RFLREHRSEWAD 
Sbjct: 429 TIVINSSPSKFLGPQYNSTM-FPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADY 487

Query: 498 SIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
            +DAYSAA +KA P  +P  R G F   QVILPLAHT+EHEEFLEV++LE  A   ED+ 
Sbjct: 488 GVDAYSAACLKASPYEVPCARPGGFPSSQVILPLAHTVEHEEFLEVVRLEGHAFSPEDVA 547

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGK--DTPS 614
           +  D++LLQLCSGVDENA G CA+LVFAPID SF+DDAP++PSGFR+IPLD     +   
Sbjct: 548 LTRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKTVCEALY 607

Query: 615 PNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVR 674
            +RTLDLAS LEVG  G + + +S     + +SV+TIAFQF FE H+++NVA+MARQYVR
Sbjct: 608 IDRTLDLASTLEVGAGGARPANESDLNNYNLRSVLTIAFQFTFENHVRDNVAAMARQYVR 667

Query: 675 GIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
            ++ASVQRVA+A++PSR  S+ GL+P PGSPEA TLARWIC+SYR
Sbjct: 668 SVMASVQRVAMAIAPSRLSSHMGLKPLPGSPEALTLARWICRSYR 712


>gi|357120582|ref|XP_003562005.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Brachypodium
           distachyon]
          Length = 861

 Score = 1032 bits (2669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/713 (69%), Positives = 593/713 (83%), Gaps = 10/713 (1%)

Query: 12  SRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQI 71
           S   GG    +D GKYVRYTPEQV+ALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQI
Sbjct: 21  SSPGGGGAPQVDTGKYVRYTPEQVDALERVYSECPKPSSLRRQQLIRECPILSNIEPKQI 80

Query: 72  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQ 131
           KVWFQNRRCREKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVS+LVYEN + R    
Sbjct: 81  KVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVYENGYMRTHLS 140

Query: 132 NAATLATTDTSCESVVTSGQHHLTPQQQHQ---HPPRDAS-PAGLLSIAEETLTEFLSKA 187
           N  ++ATTDTSCESVVTSGQH    QQQ+     P RDA+ PAGLL+IAEETL EFLSKA
Sbjct: 141 NP-SVATTDTSCESVVTSGQHQ---QQQNPAVPRPQRDANNPAGLLAIAEETLAEFLSKA 196

Query: 188 TGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD 247
           TGTAV+WVQM GMKPGPDSIGI+A+SH C+GVAARACGLV L+PT+VAEILKDRPSWYRD
Sbjct: 197 TGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRD 256

Query: 248 CRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN 307
           CR V+V+ ++PTG+ GTIEL+YMQ YAPTTLA  RDFW+LRYTS LEDGSLV+CERSL  
Sbjct: 257 CRCVDVLQIIPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQ 316

Query: 308 TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 367
              GPS P  P+FVRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYES  
Sbjct: 317 ATGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPK 376

Query: 368 LIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           ++AQK T+AALRH+RQI+ E S     G GR+PA LR  SQRLSRGFN+A+NGF D+GWS
Sbjct: 377 ILAQKMTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFLDDGWS 436

Query: 428 MLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL 487
           ++ SDG +DVT+ +NSSP+K++G  ++    F ++   +LCAKASMLLQ+VPPA+L+RFL
Sbjct: 437 LMSSDGAEDVTIAINSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFL 496

Query: 488 REHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLE 546
           REHRSEWAD  +DAYSAAA++A P ++P  RA  F G QVILPLAHT+EHEEFLEVI+LE
Sbjct: 497 REHRSEWADPGVDAYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLE 556

Query: 547 NMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPL 606
             +   +++++  D++LLQLCSGVDENA G CA+LVFAPID SF+DDAP++PSGFR+IPL
Sbjct: 557 GHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPL 616

Query: 607 DSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVA 666
           D+  D PS  RTLDLAS LEVG  G +A+ D+ +   +T+SV+TIAFQF++E HL+E+VA
Sbjct: 617 DAKTDAPSATRTLDLASTLEVGSGGTRAASDAPST-SNTRSVLTIAFQFSYENHLRESVA 675

Query: 667 SMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           SMARQYVR ++ASVQRVA+A++PSR G    ++ PPGSPEAHTLARWI +SYR
Sbjct: 676 SMARQYVRTVVASVQRVAMAIAPSRLGGQIEMKNPPGSPEAHTLARWIGKSYR 728


>gi|326505494|dbj|BAJ95418.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 867

 Score = 1032 bits (2668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/703 (70%), Positives = 590/703 (83%), Gaps = 10/703 (1%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           +D GKYVRYTPEQV+ALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 37  VDTGKYVRYTPEQVDALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 96

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVS+LVYEN + R    N  ++ATTDT
Sbjct: 97  EKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVYENGYMRTHLSNP-SVATTDT 155

Query: 142 SCESVVTSGQHHLTPQQQHQ---HPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQM 197
           SCESVVTSGQH    QQQ+     P RDA+ PAGLL+IAEETL EFLSKATGTAV+WVQM
Sbjct: 156 SCESVVTSGQHQ---QQQNAVVPRPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQM 212

Query: 198 PGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVL 257
            GMKPGPDSIGI+A+SH C+GVAARACGLV L+PT+VAEILKDRPSWYRDCR V+V+ ++
Sbjct: 213 VGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDVLQII 272

Query: 258 PTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQA 317
           PTG+ GTIEL+YMQ YAPTTLA  RDFW+LRYTS LEDGSLV+CERSL     GPS P  
Sbjct: 273 PTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQATGGPSGPNT 332

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
           P+FVRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYES  ++AQK T+AA
Sbjct: 333 PNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAA 392

Query: 378 LRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           LRH+RQI+ E S     G GR+PA LR  SQRLSRGFN+A+NGF D+GWS++ SDG +DV
Sbjct: 393 LRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFLDDGWSLMSSDGAEDV 452

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADS 497
           T+ +NSSP+K+ G  ++    F ++   VLCAKASMLLQ+VPPA+L+RFLREHRSEWAD 
Sbjct: 453 TIAINSSPNKLAGTHVNPSQMFSAIGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADP 512

Query: 498 SIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
            +DAYSAAA++A P ++P  RA  F G QVILPLAHT+EHEEFLEVI+LE  +   ++++
Sbjct: 513 GVDAYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVV 572

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPN 616
           +  D++LLQLCSGVDENA G CA+LVFAPID SF+DDAP++PSGFR+IPLD+  D PS  
Sbjct: 573 LSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDAPSAT 632

Query: 617 RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGI 676
           RTLDLAS LEVGP G +A  D+S+   +T+SV+TIAFQF++E HL+E+VA+MARQYVR +
Sbjct: 633 RTLDLASTLEVGPGGTRAPSDASST-SNTRSVLTIAFQFSYENHLRESVAAMARQYVRTV 691

Query: 677 IASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +ASVQRVA+A++PSR G    ++ PPGSPEAHTLARWI +SYR
Sbjct: 692 VASVQRVAMAIAPSRPGGQIEMKNPPGSPEAHTLARWIGRSYR 734


>gi|224056521|ref|XP_002298892.1| predicted protein [Populus trichocarpa]
 gi|60327627|gb|AAX19053.1| class III HD-Zip protein 4 [Populus trichocarpa]
 gi|222846150|gb|EEE83697.1| predicted protein [Populus trichocarpa]
          Length = 844

 Score = 1028 bits (2657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/700 (71%), Positives = 581/700 (83%), Gaps = 4/700 (0%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 12  MDSSKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 71

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LVYEN F RQQ Q A+   TTD 
Sbjct: 72  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGFMRQQIQTASA-TTTDN 130

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
           SCESVV SGQH        Q P RDA+ PAGLL+IAEETL EFLSKATGTAV+WVQM GM
Sbjct: 131 SCESVVMSGQHQQQQNPTPQQPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGM 190

Query: 201 KPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTG 260
           KPGPDSIGIVA+S  C+GVAARACGLV L+PT+VAEILKDRPSW+RDCR +++++V+PTG
Sbjct: 191 KPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCRCLDILSVIPTG 250

Query: 261 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHF 320
           S GTIEL+YMQ YAPTTLA ARDFW LRYT+ LEDGSLV+CERSL ++  GP+ P    F
Sbjct: 251 SGGTIELIYMQTYAPTTLAAARDFWTLRYTTTLEDGSLVICERSLTSSTGGPTGPPPSSF 310

Query: 321 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH 380
           +RAEMLPSGYLIRPCEG GSIIHIVDH+DL+ WSVPEVLRPLYESS ++AQK TMAALRH
Sbjct: 311 IRAEMLPSGYLIRPCEGSGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKMTMAALRH 370

Query: 381 LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
           +RQI+QE S     G GR+PA LR  SQRL RGFN+A+NGFTD+GWS+L SDG DDVT+ 
Sbjct: 371 IRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFTDDGWSLLGSDGGDDVTIV 430

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSID 500
           +NSSP+K +G Q +  + FP+    VLCAKASMLLQ+VPPA+L+RFLREHRSEWAD  +D
Sbjct: 431 INSSPNKFLGSQYN-ASMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVD 489

Query: 501 AYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           AYSAA +KA P ++P  R G F   QVILPLAHT+EHEEFLEV++LE  A   ED+ +  
Sbjct: 490 AYSAACLKASPYAVPCARPGGFPSSQVILPLAHTMEHEEFLEVVRLEGHAFSPEDVALAR 549

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTL 619
           D++LLQLCSGVDENAVG CA+LVFAPID SF+DDAP++ SGFR+IPLD   D P+  RTL
Sbjct: 550 DMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPLLSSGFRVIPLDPKTDAPATTRTL 609

Query: 620 DLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIAS 679
           DLAS LEVGP G + + ++ T   + +SV+TIAFQF+FE H+++NVA+MARQYVRG++ S
Sbjct: 610 DLASTLEVGPGGTRPASEADTNSYNLRSVLTIAFQFSFENHMRDNVAAMARQYVRGVVGS 669

Query: 680 VQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           VQRVA+A++PSR  SN G +  PGSPEA TLA+WIC+SYR
Sbjct: 670 VQRVAMAIAPSRLSSNVGPKTLPGSPEALTLAQWICRSYR 709


>gi|357126818|ref|XP_003565084.1| PREDICTED: homeobox-leucine zipper protein HOX29-like isoform 1
           [Brachypodium distachyon]
          Length = 839

 Score = 1027 bits (2655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/706 (70%), Positives = 592/706 (83%), Gaps = 11/706 (1%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+REC +L+ ++PKQIKVWFQNRRCR
Sbjct: 11  MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLAAVDPKQIKVWFQNRRCR 70

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQR+E+ RLQ++NRKLTAMNKLLMEENDRLQKQVS LVYEN ++RQQ  ++A LATTDT
Sbjct: 71  EKQRRESGRLQSLNRKLTAMNKLLMEENDRLQKQVSSLVYENGYYRQQHTHSAGLATTDT 130

Query: 142 SCESVVTSGQHH--LTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG 199
           SCESVVTSGQ    + P      PPRDASPAGL+SIAEETLTEFLSKATGTAVEWVQMPG
Sbjct: 131 SCESVVTSGQQQNVVVPP-----PPRDASPAGLMSIAEETLTEFLSKATGTAVEWVQMPG 185

Query: 200 MKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPT 259
           MKPGPDSIGI+AISHGC GVAARACGLVG++P +VAEILKDRP W RDCRS+EVVNVLP 
Sbjct: 186 MKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPLWLRDCRSMEVVNVLPA 245

Query: 260 GSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
           GS+GTIELLYMQLYA TTLAPARDFWLLRYTS+L+DGSLVVCERSL++ Q GPSMP    
Sbjct: 246 GSNGTIELLYMQLYAQTTLAPARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQP 305

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR 379
           F+R EMLPSG+LIRP +GGGS+IHIVDH+DLEP SVPEV+RPLYESS ++AQK +MAALR
Sbjct: 306 FIRGEMLPSGFLIRPSDGGGSVIHIVDHLDLEPRSVPEVVRPLYESSAIVAQKMSMAALR 365

Query: 380 HLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTV 439
           +LRQ++ E +   +TGWGR+PAALRALSQ+L+RGFNEAL G TD+GWS +ESDG+DDV +
Sbjct: 366 YLRQLAHEDTHSIITGWGRQPAALRALSQKLTRGFNEALCGLTDDGWSAIESDGVDDVCI 425

Query: 440 HVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSI 499
            VNSS +K++    ++ +G P +S  VLCAKASMLLQDV P  LL+FL EHRS+WADS++
Sbjct: 426 SVNSSLNKVISCNATFGDGLPIVSAGVLCAKASMLLQDVSPPSLLQFLHEHRSQWADSTL 485

Query: 500 DAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           DA+ A+A+K   C+LP+ R G F GQVILPLAHT + EEFLEVIK+ N ++Y +D +M  
Sbjct: 486 DAFFASALKPNFCNLPMSRLGGFSGQVILPLAHTFDPEEFLEVIKIGNASNY-QDTLMHR 544

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTL 619
           D+FLLQ+ +GVDEN VG+C+EL+FAPIDASFSDD+P++PSGFRIIP+DS  DT SPN TL
Sbjct: 545 DLFLLQMYNGVDENTVGSCSELIFAPIDASFSDDSPLLPSGFRIIPIDSPLDTSSPNCTL 604

Query: 620 DLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIAS 679
           DLAS LEVG    + +G  S      K+V+TIAFQFAFE HLQ++VA+MA+QY+R II+S
Sbjct: 605 DLASTLEVGTPRGRMTGSGSVNGAGMKAVMTIAFQFAFESHLQDSVAAMAQQYMRSIISS 664

Query: 680 VQRVALALSPSRFGSNAGLRPPPG-SPEAHTLARWICQSYRCVFYF 724
           VQR+ALALS SR  S+   R  P  +PEA TL+RWI QSYR  F+F
Sbjct: 665 VQRIALALSSSRLVSHGSPRLLPHVTPEAATLSRWIVQSYR--FHF 708


>gi|110349554|gb|ABG73252.1| class III HD-Zip protein HDZ33 [Ginkgo biloba]
          Length = 776

 Score = 1023 bits (2645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/648 (75%), Positives = 559/648 (86%), Gaps = 7/648 (1%)

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA 133
           WFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN + RQQ Q A
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYLRQQIQTA 60

Query: 134 ATLATTDTSCESVVTSG--QHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTA 191
            ++ATTDTSCESVVTSG  QHHLTPQ    HPPRDASPAGLLSIAEETLT+FLSKATGTA
Sbjct: 61  -SIATTDTSCESVVTSGPHQHHLTPQ----HPPRDASPAGLLSIAEETLTQFLSKATGTA 115

Query: 192 VEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV 251
           V+W+QMPGMKPGPDSIGIVAISH CTGVA+RACGLVGL+ ++VAEILKDRPSW RDCR +
Sbjct: 116 VDWIQMPGMKPGPDSIGIVAISHSCTGVASRACGLVGLESSKVAEILKDRPSWLRDCRCL 175

Query: 252 EVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 311
           +V+   PTG+ GTIELLY Q+YAPTTLA ARD W LRYTSVLEDGSLVVCERSL  TQ G
Sbjct: 176 DVLTAFPTGNGGTIELLYTQMYAPTTLASARDIWTLRYTSVLEDGSLVVCERSLTGTQGG 235

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
           P+MP   HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV+RPLYESST++AQ
Sbjct: 236 PNMPSVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVIRPLYESSTVLAQ 295

Query: 372 KTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLES 431
           K T++ALRHLRQ++QEVS   V GWGR+PAALRA SQRL RGFNEA+NGFTD+GWS+L +
Sbjct: 296 KMTISALRHLRQVAQEVSGEVVLGWGRQPAALRAFSQRLGRGFNEAVNGFTDDGWSLLGN 355

Query: 432 DGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHR 491
           DG+DDVT+ +NSSPSK++  QL+  +G  ++   +LCAKASMLLQ+VPPA+L+RFLREHR
Sbjct: 356 DGMDDVTIAINSSPSKLLASQLAASDGLAALGGGILCAKASMLLQNVPPALLVRFLREHR 415

Query: 492 SEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHY 551
           SEWAD +IDAYS+AA+KA P S+P  R G FG QVILPLAHT+EHEEFLEVIKLE     
Sbjct: 416 SEWADCNIDAYSSAAMKANPYSIPSSRGGVFGSQVILPLAHTMEHEEFLEVIKLEGHGLT 475

Query: 552 REDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKD 611
            E+ ++  D+FLLQLCSG+DENAVG CA+LVFAPIDASF+DDAP++PSGFR+IPLDSG D
Sbjct: 476 HEETVLSRDMFLLQLCSGIDENAVGCCAQLVFAPIDASFADDAPLLPSGFRVIPLDSGTD 535

Query: 612 TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQ 671
             +PNRTLDLASAL+VG  G + SGD  +   + +SV+TIAFQF +E HL++NVA+MARQ
Sbjct: 536 GSTPNRTLDLASALDVGSAGTRTSGDYGSSTYNMRSVLTIAFQFTYETHLRDNVAAMARQ 595

Query: 672 YVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           YVR ++ASVQRVA+AL+PSR  +  G RPPPG+PEA TLA WICQSYR
Sbjct: 596 YVRSVVASVQRVAMALAPSRQSTLLGPRPPPGTPEALTLAGWICQSYR 643


>gi|357156427|ref|XP_003577453.1| PREDICTED: homeobox-leucine zipper protein HOX33-like [Brachypodium
           distachyon]
          Length = 875

 Score = 1020 bits (2638), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/723 (68%), Positives = 594/723 (82%), Gaps = 9/723 (1%)

Query: 3   AVSSGGSRDSRDS-GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           A+ SGG   +R S G     +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQ+IR+CP
Sbjct: 19  AIHSGGGGMARLSPGAGAPQVDTGKYVRYTPEQVEALERVYTECPKPSSLRRQQIIRDCP 78

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           IL NIEPKQIKVWFQNRRCREKQRKE+SR+Q VNRKLTAMNKLLMEENDRLQKQVS+LVY
Sbjct: 79  ILCNIEPKQIKVWFQNRRCREKQRKESSRMQTVNRKLTAMNKLLMEENDRLQKQVSRLVY 138

Query: 122 EN---TFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAE 177
           EN      + Q +NA+  ATTDTSCESVVTSGQHH         P RDA+ PAGLL+IAE
Sbjct: 139 ENMSAKSLKTQLRNASA-ATTDTSCESVVTSGQHHQQQNPAAPRPQRDANNPAGLLAIAE 197

Query: 178 ETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEI 237
           ETL EFLSKATGTAVEWVQM GMKPGPDSIGI+A+SH C+GVAARACGLV L+PT+VAEI
Sbjct: 198 ETLAEFLSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEI 257

Query: 238 LKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGS 297
           LKDRPSWYRDCR V++++V+PTG+ GTIEL+YMQ YAPTTL   RDFW LRYTS LEDGS
Sbjct: 258 LKDRPSWYRDCRCVDILHVIPTGNGGTIELIYMQTYAPTTLVAPRDFWTLRYTSGLEDGS 317

Query: 298 LVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPE 357
           LV+CERSL  +  GPS P  P+F+RAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPE
Sbjct: 318 LVICERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPE 377

Query: 358 VLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEA 417
           VLRPLYES  ++AQKTT+AALRH+RQI+ E S     G GR+PA LR  SQRLSRGFN+A
Sbjct: 378 VLRPLYESPKILAQKTTIAALRHIRQIAHESSGEIPYGAGRQPAVLRTFSQRLSRGFNDA 437

Query: 418 LNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQD 477
           ++GF D+GWS+L SDG +D+T+ VNSSP+K+ G  +S    F ++   +LCAKASMLLQ+
Sbjct: 438 VSGFPDDGWSLLSSDGSEDITITVNSSPNKLAGSHVSPSPLFSAIGGGILCAKASMLLQN 497

Query: 478 VPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEH 536
           VPPA+L+RFLREHRSEWAD  +DAYSAA+++A P ++P  RAG F G QVILPLAHT+EH
Sbjct: 498 VPPALLVRFLREHRSEWADPGVDAYSAASLRASPYAVPGLRAGGFMGSQVILPLAHTLEH 557

Query: 537 EEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPI 596
           EEFLEV++LE      +++++  D++LLQLCSGVDENA G CA+LVFAPID SF+DDAP+
Sbjct: 558 EEFLEVLRLEGHGFSHDEVLLARDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPL 617

Query: 597 IPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGN-KASGDSSTQCGSTKSVITIAFQF 655
           +PSGFR+IPLD+  D PS  RTLDLASALEVG  G  + S D+S  C + +SV+TIAFQF
Sbjct: 618 LPSGFRVIPLDTKTDVPSATRTLDLASALEVGSGGALRGSSDASGTC-NMRSVLTIAFQF 676

Query: 656 AFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWIC 715
           +FE HL+E+VA+MARQYVR ++ASVQRVA+A++PSR GS   L+ PPGSPEA TLA WI 
Sbjct: 677 SFENHLRESVAAMARQYVRAVMASVQRVAMAIAPSRLGSQIELKHPPGSPEALTLASWIG 736

Query: 716 QSY 718
           +SY
Sbjct: 737 KSY 739


>gi|115489546|ref|NP_001067260.1| Os12g0612700 [Oryza sativa Japonica Group]
 gi|122248513|sp|Q2QM96.1|HOX33_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
           Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
           transcription factor HOX33; AltName: Full=OsHox33
 gi|187609460|sp|A2ZMN9.2|HOX33_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
           Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
           transcription factor HOX33; AltName: Full=OsHox33
 gi|77556590|gb|ABA99386.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113649767|dbj|BAF30279.1| Os12g0612700 [Oryza sativa Japonica Group]
 gi|218187239|gb|EEC69666.1| hypothetical protein OsI_39093 [Oryza sativa Indica Group]
 gi|222617467|gb|EEE53599.1| hypothetical protein OsJ_36852 [Oryza sativa Japonica Group]
          Length = 855

 Score = 1014 bits (2622), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/728 (68%), Positives = 594/728 (81%), Gaps = 16/728 (2%)

Query: 2   MAVSSGGSRDSRDSGGQKMI----MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLI 57
           MA ++ G R  R S          +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLI
Sbjct: 1   MAAAAVGGRGERLSSSSPTAAAPQVDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLI 60

Query: 58  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS 117
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKL AMNKLLMEENDRLQKQVS
Sbjct: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVS 120

Query: 118 QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQ---HPPRDAS-PAGLL 173
           +LVYEN + R Q  N +  ATTDTSCESVVTSGQHH   QQQ+    HP RDA+ PAGLL
Sbjct: 121 RLVYENGYMRTQLHNPSA-ATTDTSCESVVTSGQHH---QQQNPAVLHPQRDANNPAGLL 176

Query: 174 SIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTR 233
           +IAEETL EF+SKATGTAVEWVQM GMKPGPDSIGI+A+SH C+GVAARACGLV L+PT+
Sbjct: 177 AIAEETLAEFMSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTK 236

Query: 234 VAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVL 293
           VAEILKDRPSWYRDCR V++++V+PTG+ GTIEL+YMQ YAPTTLA  RDFW LRYTS L
Sbjct: 237 VAEILKDRPSWYRDCRCVDIIHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWTLRYTSGL 296

Query: 294 EDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPW 353
           EDGSLV+CERSL  +  GPS P  P+F+RAE+LPSGYLIRPCEGGGS+I+IVDH+DL+ W
Sbjct: 297 EDGSLVICERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAW 356

Query: 354 SVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRG 413
           SVPEVLRPLYES  ++AQK T+AALRH+RQI+ E S     G GR+PA  R  SQRLSRG
Sbjct: 357 SVPEVLRPLYESPKILAQKMTIAALRHIRQIAHESSGEIPYGAGRQPAVFRTFSQRLSRG 416

Query: 414 FNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASM 473
           FN+A++GF D+GWS+L SDG +D+T+ VNSSP+K++G  +S    F ++   +LCAKASM
Sbjct: 417 FNDAVSGFPDDGWSLLSSDGSEDITISVNSSPNKLVGSHVSPNPLFSTVGGGILCAKASM 476

Query: 474 LLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAH 532
           LLQ+VPPA+L+RFLREHRSEWAD  +DAYSAA+++A P ++P  R   F G QVILPLAH
Sbjct: 477 LLQNVPPALLVRFLREHRSEWADPGVDAYSAASLRASPYAVPGLRTSGFMGSQVILPLAH 536

Query: 533 TIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSD 592
           T+EHEEFLEVI+LE      +++++  D++LLQLCSGVDENA    A+LVFAPID SF+D
Sbjct: 537 TLEHEEFLEVIRLEGHGFSHDEVLLSRDMYLLQLCSGVDENATSASAQLVFAPIDESFAD 596

Query: 593 DAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTG-NKASGDSSTQCGSTKSVITI 651
           DAP++PSGFR+IPLD+  D PS  RTLDLASALEVGP G ++AS ++S  C   +SV+TI
Sbjct: 597 DAPLLPSGFRVIPLDTKMDGPSATRTLDLASALEVGPGGASRASVEASGTC--NRSVLTI 654

Query: 652 AFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLA 711
           AFQF++E HL+E+VA+MAR YVR ++ASVQRVA+A++PSR G   G++ PP SPEA TLA
Sbjct: 655 AFQFSYENHLRESVAAMARSYVRAVMASVQRVAVAIAPSRLGPQIGMKHPPASPEALTLA 714

Query: 712 RWICQSYR 719
            WI +SYR
Sbjct: 715 SWIGRSYR 722


>gi|357126820|ref|XP_003565085.1| PREDICTED: homeobox-leucine zipper protein HOX29-like isoform 2
           [Brachypodium distachyon]
          Length = 872

 Score = 1011 bits (2615), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/739 (67%), Positives = 592/739 (80%), Gaps = 44/739 (5%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+REC +L+ ++PKQIKVWFQNRRCR
Sbjct: 11  MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLAAVDPKQIKVWFQNRRCR 70

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA-------- 133
           EKQR+E+ RLQ++NRKLTAMNKLLMEENDRLQKQVS LVYEN ++RQQ  ++        
Sbjct: 71  EKQRRESGRLQSLNRKLTAMNKLLMEENDRLQKQVSSLVYENGYYRQQHTHSVRPSSPPP 130

Query: 134 -------------------------ATLATTDTSCESVVTSGQHH--LTPQQQHQHPPRD 166
                                    A LATTDTSCESVVTSGQ    + P      PPRD
Sbjct: 131 APAAMMREAHAFVAPPPPPLLLPLQAGLATTDTSCESVVTSGQQQNVVVPP-----PPRD 185

Query: 167 ASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGL 226
           ASPAGL+SIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGI+AISHGC GVAARACGL
Sbjct: 186 ASPAGLMSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCAGVAARACGL 245

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWL 286
           VG++P +VAEILKDRP W RDCRS+EVVNVLP GS+GTIELLYMQLYA TTLAPARDFWL
Sbjct: 246 VGMEPAKVAEILKDRPLWLRDCRSMEVVNVLPAGSNGTIELLYMQLYAQTTLAPARDFWL 305

Query: 287 LRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVD 346
           LRYTS+L+DGSLVVCERSL++ Q GPSMP    F+R EMLPSG+LIRP +GGGS+IHIVD
Sbjct: 306 LRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGGGSVIHIVD 365

Query: 347 HMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRAL 406
           H+DLEP SVPEV+RPLYESS ++AQK +MAALR+LRQ++ E +   +TGWGR+PAALRAL
Sbjct: 366 HLDLEPRSVPEVVRPLYESSAIVAQKMSMAALRYLRQLAHEDTHSIITGWGRQPAALRAL 425

Query: 407 SQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAV 466
           SQ+L+RGFNEAL G TD+GWS +ESDG+DDV + VNSS +K++    ++ +G P +S  V
Sbjct: 426 SQKLTRGFNEALCGLTDDGWSAIESDGVDDVCISVNSSLNKVISCNATFGDGLPIVSAGV 485

Query: 467 LCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQV 526
           LCAKASMLLQDV P  LL+FL EHRS+WADS++DA+ A+A+K   C+LP+ R G F GQV
Sbjct: 486 LCAKASMLLQDVSPPSLLQFLHEHRSQWADSTLDAFFASALKPNFCNLPMSRLGGFSGQV 545

Query: 527 ILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPI 586
           ILPLAHT + EEFLEVIK+ N ++Y +D +M  D+FLLQ+ +GVDEN VG+C+EL+FAPI
Sbjct: 546 ILPLAHTFDPEEFLEVIKIGNASNY-QDTLMHRDLFLLQMYNGVDENTVGSCSELIFAPI 604

Query: 587 DASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTK 646
           DASFSDD+P++PSGFRIIP+DS  DT SPN TLDLAS LEVG    + +G  S      K
Sbjct: 605 DASFSDDSPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEVGTPRGRMTGSGSVNGAGMK 664

Query: 647 SVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPG-SP 705
           +V+TIAFQFAFE HLQ++VA+MA+QY+R II+SVQR+ALALS SR  S+   R  P  +P
Sbjct: 665 AVMTIAFQFAFESHLQDSVAAMAQQYMRSIISSVQRIALALSSSRLVSHGSPRLLPHVTP 724

Query: 706 EAHTLARWICQSYRCVFYF 724
           EA TL+RWI QSYR  F+F
Sbjct: 725 EAATLSRWIVQSYR--FHF 741


>gi|326504574|dbj|BAJ91119.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 880

 Score = 1009 bits (2610), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/724 (68%), Positives = 590/724 (81%), Gaps = 13/724 (1%)

Query: 3   AVSSGGSRDSRDS-GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           A  SG  + +R S G     +D GKYVRYTPEQVEALER+Y+ECPKPSS+RRQQ+IR+CP
Sbjct: 28  ATDSGAGKMARLSPGAAAPQVDTGKYVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCP 87

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           IL NIEPKQIKVWFQNRRCREKQRKE+SR+Q VNRKLTAMNKLLMEENDRLQKQVS+LVY
Sbjct: 88  ILCNIEPKQIKVWFQNRRCREKQRKESSRMQTVNRKLTAMNKLLMEENDRLQKQVSRLVY 147

Query: 122 ENTF---FRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAE 177
           EN      + +  NA+  ATTDTSCESVVTSGQ       +   P RDA+ PAGLL+IAE
Sbjct: 148 ENVSAKSLKTKIHNASA-ATTDTSCESVVTSGQQQALAAPR---PQRDANNPAGLLAIAE 203

Query: 178 ETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEI 237
           ETLT F+SKATGTAVEWVQM GMKPGPDSIGI+A+SH C GVAARACGLV L+PT+VAEI
Sbjct: 204 ETLTAFMSKATGTAVEWVQMMGMKPGPDSIGIIAVSHNCIGVAARACGLVSLEPTKVAEI 263

Query: 238 LKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGS 297
           LKDRPSWYRDCR V++++V PTG+ GTIEL+YMQ YAPTTLA  RDFW LRYT  LEDGS
Sbjct: 264 LKDRPSWYRDCRCVDILHVFPTGNGGTIELIYMQTYAPTTLAAPRDFWTLRYTCGLEDGS 323

Query: 298 LVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPE 357
           LV+CERSL  +  GPS P  P F+RAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPE
Sbjct: 324 LVICERSLTQSTGGPSGPNTPGFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPE 383

Query: 358 VLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEA 417
           VLRPLYES  ++AQK T+AALRH+RQI+ E S     G GR+PA LR  SQRLSRGFN+A
Sbjct: 384 VLRPLYESPKIVAQKMTIAALRHIRQIAHESSGEIPYGAGRQPAVLRTFSQRLSRGFNDA 443

Query: 418 LNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQD 477
           ++GF D+GWS+L SDG +D+T+ VNSSP+K++G  +S    F ++   +LCAKASML+QD
Sbjct: 444 VSGFPDDGWSLLTSDGAEDITITVNSSPNKLVGSHISPSPLFSAIGGGILCAKASMLVQD 503

Query: 478 VPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEH 536
           VPPA+L+RFLREHRSEWAD  +DAYSAA+++A P ++P  RAG F G QVILPLAHT+EH
Sbjct: 504 VPPALLVRFLREHRSEWADPGVDAYSAASLRASPYAVPGLRAGGFMGNQVILPLAHTLEH 563

Query: 537 EEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPI 596
           EEFLEV++LE      +++++  D++LLQLCSGVDENA G CA+LVFAPID SF+DDAP+
Sbjct: 564 EEFLEVLRLEGHGFSHDEVLLARDMYLLQLCSGVDENASGACAQLVFAPIDESFADDAPL 623

Query: 597 IPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGN-KASGDSSTQCGSTKSVITIAFQF 655
           +PSGFR+IPLD+  D PS  RTLDLASALEVG  G  + SGDS   C  T+SV+TIAFQF
Sbjct: 624 LPSGFRVIPLDTKTDVPSATRTLDLASALEVGSGGALRGSGDSPGGC--TRSVLTIAFQF 681

Query: 656 AFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWIC 715
           +FE HL+E+VA+MARQYVR ++ASVQRVA+A++PSR GS   L+ PPGSPEA TLA WI 
Sbjct: 682 SFENHLRESVAAMARQYVRAVMASVQRVAMAIAPSRLGSQIQLKHPPGSPEALTLASWIG 741

Query: 716 QSYR 719
           +SYR
Sbjct: 742 RSYR 745


>gi|224113651|ref|XP_002332526.1| predicted protein [Populus trichocarpa]
 gi|60327625|gb|AAX19052.1| class III HD-Zip protein 3 [Populus trichocarpa]
 gi|222832638|gb|EEE71115.1| predicted protein [Populus trichocarpa]
          Length = 843

 Score = 1008 bits (2606), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/700 (70%), Positives = 573/700 (81%), Gaps = 5/700 (0%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPIL NIEPKQIKVWFQNRRCR
Sbjct: 12  MDSSKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILCNIEPKQIKVWFQNRRCR 71

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVS LVYEN + RQQ Q A+  AT D 
Sbjct: 72  EKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMRQQIQTASATAT-DN 130

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
           SCESVV SGQH        Q P RDA+ PAGLL+IAEETL EFLSKATGTAV+WVQM GM
Sbjct: 131 SCESVVMSGQHQQQQNPTPQQPQRDANNPAGLLTIAEETLAEFLSKATGTAVDWVQMIGM 190

Query: 201 KPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTG 260
           KPGPDSIGIVA+S  C+GVAARACGLV L+P +VAEILKDRPSW+RDCR +++++V+PTG
Sbjct: 191 KPGPDSIGIVAVSRNCSGVAARACGLVSLEPIKVAEILKDRPSWFRDCRCLDIMSVIPTG 250

Query: 261 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHF 320
           S GTIEL+YMQ YAPTTLA ARDFW LRYT+ LEDGSLV+CERSL ++  GP+ P +  F
Sbjct: 251 SGGTIELIYMQTYAPTTLAAARDFWTLRYTTTLEDGSLVICERSLTSSTGGPTGPPSSSF 310

Query: 321 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH 380
           VRA+MLPSGYLIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS ++AQK TMAAL++
Sbjct: 311 VRADMLPSGYLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKMTMAALQY 370

Query: 381 LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
           +RQI+QE S     G GR+PA LR  SQRL RGFN+A+NGFTD GWS+L+ DG DDVT+ 
Sbjct: 371 IRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFTDSGWSLLDGDGGDDVTIV 430

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSID 500
           +NSSP+K +G Q  Y          VLCAKASMLLQ+VPPA+L+RFLREHRSEWAD  +D
Sbjct: 431 INSSPTKFLGSQ--YNASISPTFGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVD 488

Query: 501 AYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
            YSAA +KA P ++P  R G F   QVILPLAHT+EHEEFLEV++LE  A   ED+ +  
Sbjct: 489 VYSAACLKASPYAVPCTRPGGFPSSQVILPLAHTVEHEEFLEVVRLEGHAFSPEDVALAQ 548

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTL 619
           D++LLQLCSGVDENA+G CA+LVFAPID SF+DDAP++PSGFR+IPLD   D P+  RTL
Sbjct: 549 DMYLLQLCSGVDENALGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKTDAPAATRTL 608

Query: 620 DLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIAS 679
           DLAS LEVGP G + + ++ T   + +SV+TIAFQF FE H ++NVA+MARQYVRG++AS
Sbjct: 609 DLASTLEVGPGGARPASEADTNSYNLRSVLTIAFQFTFENHFRDNVAAMARQYVRGVVAS 668

Query: 680 VQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           VQRVA+A+SPSR  SN G +  P SPEA TLARWI +SYR
Sbjct: 669 VQRVAMAISPSRLSSNMGPKSLPVSPEALTLARWIYRSYR 708


>gi|169730542|gb|ACA64837.1| SKIP interacting protein 22 [Oryza sativa]
          Length = 855

 Score = 1007 bits (2603), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/728 (67%), Positives = 592/728 (81%), Gaps = 16/728 (2%)

Query: 2   MAVSSGGSRDSRDSGGQKMI----MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLI 57
           MA ++ G R  R S          +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLI
Sbjct: 1   MAAAAVGGRGERLSSSSPTAAAPQVDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLI 60

Query: 58  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS 117
           RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKL AMNKLLMEENDRLQKQVS
Sbjct: 61  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVS 120

Query: 118 QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQ---HPPRDAS-PAGLL 173
           +LVYEN + R Q  N +  ATTDTSCESVVTSGQHH   QQQ+    HP RDA+ PAGLL
Sbjct: 121 RLVYENGYMRTQLHNPSA-ATTDTSCESVVTSGQHH---QQQNPAVLHPQRDANNPAGLL 176

Query: 174 SIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTR 233
           +IAEETL EF+SKATGTAVEWVQM GMKPGPDSIGI+ +SH C+GVAARACGLV L+PT+
Sbjct: 177 AIAEETLAEFMSKATGTAVEWVQMVGMKPGPDSIGIITVSHNCSGVAARACGLVSLEPTK 236

Query: 234 VAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVL 293
           VAEILKDRPSWYRDCR V++++V+PTG+ GTIEL+YMQ +APTTLA  RDFW LRYTS L
Sbjct: 237 VAEILKDRPSWYRDCRCVDIIHVIPTGNGGTIELIYMQTHAPTTLAAPRDFWTLRYTSGL 296

Query: 294 EDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPW 353
           EDGSLV+CERSL  +  GPS P   +F+RAE+LPSGYLIRPCEGGGS+I+IVDH+DL+ W
Sbjct: 297 EDGSLVICERSLTQSTGGPSGPNTLNFIRAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAW 356

Query: 354 SVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRG 413
           SVPEVLRPLYES  ++AQK T+AALRH+RQI+ E S     G GR+PA  R  SQRLSRG
Sbjct: 357 SVPEVLRPLYESPKILAQKMTIAALRHIRQIAHESSGEIPYGAGRQPAVFRTFSQRLSRG 416

Query: 414 FNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASM 473
           FN+A++GF D+GWS+L SDG +D+T+ VNSSP+K++G  +S    F ++   +LCAKASM
Sbjct: 417 FNDAVSGFPDDGWSLLSSDGSEDITISVNSSPNKLVGSHVSPNPLFSTVGGGILCAKASM 476

Query: 474 LLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAH 532
           LLQ+VPPA+L+RFLREHRSEWAD  +DAYSAA+++A P ++P  R   F G QVILPLAH
Sbjct: 477 LLQNVPPALLVRFLREHRSEWADPGVDAYSAASLRASPYAVPGLRTSGFMGSQVILPLAH 536

Query: 533 TIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSD 592
           T+EHEEFLEVI+LE      +++++  D++LLQLCSGVDENA    A+LVFAPID SF+D
Sbjct: 537 TLEHEEFLEVIRLEGHGFSHDEVLLSRDMYLLQLCSGVDENATSASAQLVFAPIDESFAD 596

Query: 593 DAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTG-NKASGDSSTQCGSTKSVITI 651
           DAP++PSGFR+IPLD+  D PS  RTLDLASALEVGP G ++AS ++S  C   +SV+TI
Sbjct: 597 DAPLLPSGFRVIPLDTKMDGPSATRTLDLASALEVGPGGASRASVEASGTC--NRSVLTI 654

Query: 652 AFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLA 711
           AFQF++E HL+E+VA+MAR YVR ++ASVQRVA+A++PSR G   G++ PP SPEA TLA
Sbjct: 655 AFQFSYENHLRESVAAMARSYVRAVMASVQRVAVAIAPSRLGPQIGMKHPPASPEALTLA 714

Query: 712 RWICQSYR 719
            WI +SYR
Sbjct: 715 SWIGRSYR 722


>gi|356533043|ref|XP_003535078.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
           max]
          Length = 846

 Score = 1002 bits (2591), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/709 (68%), Positives = 577/709 (81%), Gaps = 6/709 (0%)

Query: 13  RDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 72
           +DS   +M  D+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIK
Sbjct: 7   KDSANNQM--DSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIK 64

Query: 73  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
           VWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LVYEN + +QQ   
Sbjct: 65  VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHT 124

Query: 133 AATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTA 191
           A+   TTD SCESVV SGQ+        QHP RDA+ PAGLL+IAEETL EFLSKATGTA
Sbjct: 125 ASAGTTTDNSCESVVMSGQNQQQ-NPTPQHPNRDANNPAGLLAIAEETLAEFLSKATGTA 183

Query: 192 VEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV 251
           V+WVQM GMKPGPDSIGIVA+S  C+GVAARACGLV L+PT+VAEILKDR SWYRDCR V
Sbjct: 184 VDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRQSWYRDCRCV 243

Query: 252 EVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 311
           +V++++PTG+ GTIELLYMQ YAPTTLA ARDFW LRYT+ LEDGSLV+CERSL ++  G
Sbjct: 244 DVLSIVPTGNGGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGG 303

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
           P+ P +  FVRAEMLPSG+L+RPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS  +AQ
Sbjct: 304 PTGPPSTTFVRAEMLPSGFLVRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKFLAQ 363

Query: 372 KTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLES 431
           K T+AAL+H+RQI+QE S       GR+PA LR  SQRL RGFN+A+NGF D+GWS++ +
Sbjct: 364 KLTIAALQHIRQIAQESSGEIQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMGT 423

Query: 432 DGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHR 491
           DG++DVT+ +NSSP+K +G   +  + FP+    VLCAKASMLLQ+VPPA+L+RFLREHR
Sbjct: 424 DGVEDVTIAINSSPNKFLGSNYN-ASMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHR 482

Query: 492 SEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAH 550
           SEWAD  +DAYSAA +KA P ++P  R G F   QVILPLAHTIEHEEFLEV+++E  A 
Sbjct: 483 SEWADYGVDAYSAACLKASPYAVPCARPGGFPSTQVILPLAHTIEHEEFLEVVRIEGHAF 542

Query: 551 YREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGK 610
             ED+ +  D++LLQLCSGVDENA+G CA+LVFAPID SF+DDA ++PSGFR+IPLD   
Sbjct: 543 SPEDVALARDMYLLQLCSGVDENAIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKS 602

Query: 611 DTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMAR 670
           D P+  RTLDLAS +EVG    + +G++     + +SV+TIAFQF FE H ++NVA+MAR
Sbjct: 603 DGPAATRTLDLASTMEVGSGNARPAGEADLNGYNLRSVLTIAFQFTFENHTRDNVAAMAR 662

Query: 671 QYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           QYVR ++ SVQRVA+A++PSRF +  G +   GSPEA TLARWIC+SYR
Sbjct: 663 QYVRSVVGSVQRVAMAIAPSRFNTQLGPKSLSGSPEALTLARWICRSYR 711


>gi|297746262|emb|CBI16318.3| unnamed protein product [Vitis vinifera]
          Length = 844

 Score = 1002 bits (2591), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/715 (69%), Positives = 578/715 (80%), Gaps = 21/715 (2%)

Query: 10  RDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           R+S  SG     +D+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPK
Sbjct: 10  RESSSSGSINKHLDSGKYVRYTAEQVEALERVYLECPKPSSLRRQQLIRECPILSNIEPK 69

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN + RQQ
Sbjct: 70  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMRQQ 129

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKAT 188
            Q A+  ATTD SCESVVT+ QH L          RDA+ PAGLLSIAEETL EFLSKAT
Sbjct: 130 LQTASA-ATTDASCESVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKAT 178

Query: 189 GTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDC 248
           GTAV+WVQMPGMKPGPDS+GI AISH C+GVAARACGLV L+P+++AEILKDRPSW+RDC
Sbjct: 179 GTAVDWVQMPGMKPGPDSVGIFAISHSCSGVAARACGLVSLEPSKIAEILKDRPSWFRDC 238

Query: 249 RSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           RS+EV  + P G+ GT+ELLY Q+YAPTTLAPARDFW LRYT+ L++GSLVVCERSL+ +
Sbjct: 239 RSLEVFTMFPAGNGGTVELLYTQIYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGS 298

Query: 309 QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL 368
             GP+   A  FVRAEMLPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLRPLYESS +
Sbjct: 299 GAGPNTAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRV 358

Query: 369 IAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
           +AQK T+AALR++RQI+QE S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS+
Sbjct: 359 VAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSL 418

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           +  DG +DV + VNS  +K +    +  N   S+   VLCAKASMLLQ+VPPA+L+RFLR
Sbjct: 419 MSCDGAEDVIIAVNS--TKNLNTTSNPANSL-SLPGGVLCAKASMLLQNVPPAVLVRFLR 475

Query: 489 EHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLEN 547
           EHRSEWAD S+DAYSAA++KA P S P  R   F G Q+I+PL HTIEHEE LEVI+LE 
Sbjct: 476 EHRSEWADFSVDAYSAASLKASPYSYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEG 535

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
            +   ED  M  DI LLQ+CSGVDENAVG C+ELVFAPID  F DDAP++PSGFRIIPLD
Sbjct: 536 HSLAHEDAFMSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLD 595

Query: 608 SG----KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQE 663
           S     ++T + +RTLDL S+LEVGP  N+A+GDSS+ C +T+SV+TIAFQF FE +LQ+
Sbjct: 596 SKSGDTQETLTTHRTLDLTSSLEVGPATNQAAGDSSS-CYNTRSVLTIAFQFPFESNLQD 654

Query: 664 NVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           NVA+MARQYVR +I+SVQRVA+A+SPS  G   G +   GSPEA TLA WICQSY
Sbjct: 655 NVATMARQYVRSVISSVQRVAMAISPSGLGPAVGPKLSAGSPEALTLAHWICQSY 709


>gi|359478353|ref|XP_002285176.2| PREDICTED: homeobox-leucine zipper protein REVOLUTA [Vitis
           vinifera]
          Length = 843

 Score = 1000 bits (2586), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/715 (69%), Positives = 577/715 (80%), Gaps = 22/715 (3%)

Query: 10  RDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           R+S  SG     +D+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPK
Sbjct: 10  RESSSSGSINKHLDSGKYVRYTAEQVEALERVYLECPKPSSLRRQQLIRECPILSNIEPK 69

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN + RQQ
Sbjct: 70  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMRQQ 129

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKAT 188
            Q  +  ATTD SCESVVT+ QH L          RDA+ PAGLLSIAEETL EFLSKAT
Sbjct: 130 LQTVS--ATTDASCESVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKAT 177

Query: 189 GTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDC 248
           GTAV+WVQMPGMKPGPDS+GI AISH C+GVAARACGLV L+P+++AEILKDRPSW+RDC
Sbjct: 178 GTAVDWVQMPGMKPGPDSVGIFAISHSCSGVAARACGLVSLEPSKIAEILKDRPSWFRDC 237

Query: 249 RSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           RS+EV  + P G+ GT+ELLY Q+YAPTTLAPARDFW LRYT+ L++GSLVVCERSL+ +
Sbjct: 238 RSLEVFTMFPAGNGGTVELLYTQIYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGS 297

Query: 309 QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL 368
             GP+   A  FVRAEMLPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLRPLYESS +
Sbjct: 298 GAGPNTAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRV 357

Query: 369 IAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
           +AQK T+AALR++RQI+QE S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS+
Sbjct: 358 VAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSL 417

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           +  DG +DV + VNS  +K +    +  N   S+   VLCAKASMLLQ+VPPA+L+RFLR
Sbjct: 418 MSCDGAEDVIIAVNS--TKNLNTTSNPANSL-SLPGGVLCAKASMLLQNVPPAVLVRFLR 474

Query: 489 EHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLEN 547
           EHRSEWAD S+DAYSAA++KA P S P  R   F G Q+I+PL HTIEHEE LEVI+LE 
Sbjct: 475 EHRSEWADFSVDAYSAASLKASPYSYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEG 534

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
            +   ED  M  DI LLQ+CSGVDENAVG C+ELVFAPID  F DDAP++PSGFRIIPLD
Sbjct: 535 HSLAHEDAFMSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLD 594

Query: 608 SG----KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQE 663
           S     ++T + +RTLDL S+LEVGP  N+A+GDSS+ C +T+SV+TIAFQF FE +LQ+
Sbjct: 595 SKSGDTQETLTTHRTLDLTSSLEVGPATNQAAGDSSS-CYNTRSVLTIAFQFPFESNLQD 653

Query: 664 NVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           NVA+MARQYVR +I+SVQRVA+A+SPS  G   G +   GSPEA TLA WICQSY
Sbjct: 654 NVATMARQYVRSVISSVQRVAMAISPSGLGPAVGPKLSAGSPEALTLAHWICQSY 708


>gi|356555875|ref|XP_003546255.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
           max]
          Length = 846

 Score =  999 bits (2582), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/709 (68%), Positives = 577/709 (81%), Gaps = 6/709 (0%)

Query: 13  RDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 72
           +DS   +M  D+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIK
Sbjct: 7   KDSANNQM--DSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIK 64

Query: 73  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
           VWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LVYEN + +QQ   
Sbjct: 65  VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHT 124

Query: 133 AATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTA 191
           A+   TTD SCESVV SGQ+        QHP RDA+ PAGLL+IAEETL EFLSKATGTA
Sbjct: 125 ASAGTTTDNSCESVVMSGQNQQQ-NPTPQHPNRDANNPAGLLAIAEETLAEFLSKATGTA 183

Query: 192 VEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV 251
           V+WVQM GMKPGPDSIGIVA+S  C+GVAARACGLV L+PT+VAEILKDR SWYRDCR V
Sbjct: 184 VDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRQSWYRDCRCV 243

Query: 252 EVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 311
           +V++++PTG+ GTIEL+YMQ YAPTTLA ARDFW LRYT+ LEDGSLV+CERSL ++  G
Sbjct: 244 DVLSIVPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGG 303

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
           P+ P +  FVRAEMLPSG+LIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS ++AQ
Sbjct: 304 PAGPPSTTFVRAEMLPSGFLIRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQ 363

Query: 372 KTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLES 431
           K T+AAL+H+RQI+ E S     G GR+PA LR  SQRL RGFN+A+NGF D+GWS++ +
Sbjct: 364 KLTIAALQHIRQIALESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMGT 423

Query: 432 DGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHR 491
           DG++DVT+ +NSSP+K +G   +  + FP+    VLCAKASMLLQ+VPPA+L+RFLREHR
Sbjct: 424 DGVEDVTIAINSSPNKFLGSNYN-ASMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHR 482

Query: 492 SEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAH 550
           SEWAD  +DAYSAA +KA P ++P  R G F   QVILPLAHTIEHEEFLEV+++E  A 
Sbjct: 483 SEWADYGVDAYSAACLKASPYAVPCARPGGFPSTQVILPLAHTIEHEEFLEVVRIEGHAF 542

Query: 551 YREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGK 610
             ED+ M  D++LLQLCSGVDE+AVG CA+LVFAPID SF+DDA ++PSGFR+IPLD   
Sbjct: 543 SPEDVAMARDMYLLQLCSGVDESAVGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKS 602

Query: 611 DTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMAR 670
           D P+P RTLDLAS +EVG    + +G++     + +SV+TIAFQF FE H ++NVA+MAR
Sbjct: 603 DGPAPTRTLDLASTMEVGSGNARPAGEADLNGYNLRSVLTIAFQFTFENHTRDNVAAMAR 662

Query: 671 QYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           QYVR ++ SVQRVA+A++PSR  +    +  PGSPEA TLARWI +SYR
Sbjct: 663 QYVRSVVGSVQRVAMAIAPSRLNTQLAPKSLPGSPEALTLARWIFRSYR 711


>gi|45479746|gb|AAS66760.1| PHAVOLUTA-like HD-ZIPIII protein [Nicotiana sylvestris]
          Length = 843

 Score =  994 bits (2571), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/707 (68%), Positives = 576/707 (81%), Gaps = 11/707 (1%)

Query: 18  QKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQN 77
           +  IMDN KYVRYTPEQVEALER+Y ECPKP+S+RRQQLIRECPILSNIEPKQIKVWFQN
Sbjct: 8   KNQIMDNSKYVRYTPEQVEALERVYAECPKPTSLRRQQLIRECPILSNIEPKQIKVWFQN 67

Query: 78  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLA 137
           RRCREKQRKEASRL  VNRKL+AMNKLLMEENDRLQKQVSQLVYEN + +QQ  N  +  
Sbjct: 68  RRCREKQRKEASRLTTVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYMKQQI-NTVSST 126

Query: 138 TTDTSCESVVTSGQHHL---TPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVE 193
           TTDTSCESVV +GQ      TPQ    HP RDA+ PAGLL+IAEETL EFL KATGTAV+
Sbjct: 127 TTDTSCESVVVNGQQQRKNPTPQ----HPERDANNPAGLLAIAEETLAEFLGKATGTAVD 182

Query: 194 WVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEV 253
           WVQM GMKPGPDSIGIVA+S  C+GVAARACGLV L+PT+VAEILKDRPSWYRDCR + +
Sbjct: 183 WVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLNI 242

Query: 254 VNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPS 313
           ++V+PTG+ GTIEL+Y+Q YAPTTLA ARDFW LRYT+ LEDGSLV+CERSL     GP+
Sbjct: 243 LSVIPTGNGGTIELIYLQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTTATGGPT 302

Query: 314 MPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKT 373
            P A  FVRAEMLPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYESS ++AQKT
Sbjct: 303 GPPATSFVRAEMLPSGYLIRPCEGGGSMIHIVDHIDLDAWSVPEVLRPLYESSKILAQKT 362

Query: 374 TMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDG 433
           T+AALRH+RQI+QE S       GR+PA LRALSQRL RGFN+A+NGF D+GW++++SDG
Sbjct: 363 TVAALRHIRQIAQETSGEIQYTGGRQPAVLRALSQRLCRGFNDAVNGFVDDGWTVMDSDG 422

Query: 434 IDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSE 493
           ++DVTV +NSS +K +G Q + ++  P+    VLCA+ASMLLQ+VPPA+L+RFLREHRSE
Sbjct: 423 VEDVTVAINSSSTKFLGSQYNTLSILPTF-GGVLCARASMLLQNVPPALLVRFLREHRSE 481

Query: 494 WADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYR 552
           WAD  +DAYSAA++KA P ++P  R G F   QVILPLA T+EHEEFLEV++LE  A   
Sbjct: 482 WADYGVDAYSAASLKASPYAVPCARPGGFPSSQVILPLAQTVEHEEFLEVVRLEGPAFSP 541

Query: 553 EDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDT 612
           ED+ +  D++LLQLCSGVDENA G CA+LVFAPID SF DDAP++PSGFR+IPL+   D 
Sbjct: 542 EDIALSRDMYLLQLCSGVDENASGACAQLVFAPIDESFGDDAPLLPSGFRVIPLEPKSDG 601

Query: 613 PSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQY 672
           P+  RTLDLAS LE G  G + +G+      + +SV+TIAFQF FE H ++NVA+MARQY
Sbjct: 602 PAATRTLDLASTLEAGTGGTRPAGEIEASNYNHRSVLTIAFQFTFESHYRDNVAAMARQY 661

Query: 673 VRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           VR I+ SVQRVA+A++PSR  S    +P PGSPEA TLARWI +SYR
Sbjct: 662 VRSIVGSVQRVAMAIAPSRLSSQLTPKPFPGSPEAVTLARWISRSYR 708


>gi|187609452|sp|A2WLR5.2|HOX29_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX29; AltName:
           Full=HD-ZIP protein HOX29; AltName: Full=Homeodomain
           transcription factor HOX29; AltName: Full=OsHox29
          Length = 861

 Score =  992 bits (2564), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/739 (67%), Positives = 594/739 (80%), Gaps = 47/739 (6%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN----------------TF 125
           EKQRKE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVY++                  
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 126 FRQQTQNAATLAT-TDTSCESVVTSGQHHLTPQQQH-QHPPRDASPAGLLSIAEETLTEF 183
            +        LAT TDTSCESVVTSG HH   Q    Q PPRDASPAGL+SIAEETLTEF
Sbjct: 121 PQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLTEF 180

Query: 184 LSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPS 243
           LSKATGTAVEW+QMPGMKPGPDSIGI+AISHGC GVAARACGLVG++P +VAEILKDRP 
Sbjct: 181 LSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPL 240

Query: 244 WYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCER 303
           W RDCRS++VVNVLP G++GTIELLYMQLYAPTTLAPARDFWLLRYTS+L+DGSLVVCER
Sbjct: 241 WLRDCRSMDVVNVLPAGANGTIELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCER 300

Query: 304 SLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 363
           SL++ Q GPSMP    F+R EMLPSG+LIRP +GGGS+IHIVDHMDLEPWSVPEV+RPLY
Sbjct: 301 SLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLY 360

Query: 364 ESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTD 423
           ESS ++AQK +MAALR+LRQ++ E ++  +TGWGR+PAALRALSQ+L+RGFNEALNG  D
Sbjct: 361 ESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGRQPAALRALSQKLTRGFNEALNGLAD 420

Query: 424 EGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAIL 483
           +GWS++ESDG+DDV + VNS  SK++G   ++ +G P +S  VLCAKASMLLQDV P  L
Sbjct: 421 DGWSVIESDGVDDVCISVNS--SKVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPPSL 478

Query: 484 LRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVI 543
           L+FLREHRS+WADS++DA+ A+A+K   C+LP+ R G F GQVILPLAHT E EEFLEVI
Sbjct: 479 LQFLREHRSQWADSNLDAFFASAMKPNFCNLPMSRLGGFSGQVILPLAHTFEPEEFLEVI 538

Query: 544 KLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRI 603
           KL N ++Y +D ++  D+FLLQ+ +GV+E++ G C+EL+FAPIDASFSDD+P++PSGFRI
Sbjct: 539 KLGNASNY-QDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSGFRI 597

Query: 604 IPLDSGKDTPSPNRTLDLASALEV--------GPTGNKASGDSSTQCGSTKSVITIAFQF 655
           IP+DS  DT SPN TLDLAS LE         G  G   +  ++    S+K+V+TIAFQF
Sbjct: 598 IPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVNGGGGTCAAAAASSSSKAVMTIAFQF 657

Query: 656 AFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPP----------PGSP 705
           AF+ HLQ++VA+MARQY+R II+SVQR+A+ALS SR      L PP          P +P
Sbjct: 658 AFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSR------LVPPGAAAAAAQLSPVTP 711

Query: 706 EAHTLARWICQSYRCVFYF 724
           EA TL RWICQSYR  F+F
Sbjct: 712 EAATLPRWICQSYR--FHF 728


>gi|242086246|ref|XP_002443548.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
 gi|241944241|gb|EES17386.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
          Length = 857

 Score =  989 bits (2557), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/706 (68%), Positives = 587/706 (83%), Gaps = 13/706 (1%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIR+CPILSNIEPKQIKVWFQNRRCR
Sbjct: 24  VDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRDCPILSNIEPKQIKVWFQNRRCR 83

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVS+LV++N + + +  ++ ++ATTDT
Sbjct: 84  EKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVFDNGYMKNRL-HSPSVATTDT 142

Query: 142 SCESVVTSGQHHLTPQQQHQ---HPP-RDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQ 196
           SCESVVTSG H+   QQQ+    HPP RDA+ PAGLL+IAEETL EF+SKATGTAV WVQ
Sbjct: 143 SCESVVTSGHHN---QQQNPAVLHPPQRDANNPAGLLAIAEETLAEFMSKATGTAVNWVQ 199

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           M GMKPGPDS+GI+A+SH C+GVAARACGLV L+PT+VAEILKDR SWYRDCR V++++V
Sbjct: 200 MVGMKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRASWYRDCRHVDILHV 259

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           +PTG+ GTIEL+YMQ YA TTLA  RDFW LRYTS L+DGSLV+CERSL  +  GPS P 
Sbjct: 260 IPTGNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTQSTGGPSGPN 319

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
            P+F+RAE+LPSGYLIRPC+GGGS+I+IVDH+DL   SVPEVLRPLYES  ++AQK T A
Sbjct: 320 TPNFIRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNASSVPEVLRPLYESPKILAQKMTAA 379

Query: 377 ALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW-SMLESDGID 435
           ALRH+RQI+ E S     G GR+PA LR  SQRLSRGFN+A++GF D+GW S+L SDG +
Sbjct: 380 ALRHIRQIAHESSGEMPYGVGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSSLLSSDGAE 439

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWA 495
           D+T+ +NSSP+K++G  +S    F +M   ++CAKASMLLQ+VPPAIL+RFLREHRSEWA
Sbjct: 440 DITISINSSPNKLIGSHVSPSPFFSAMGGGIMCAKASMLLQNVPPAILVRFLREHRSEWA 499

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           D  +DAYSAA+++A P ++P  RAG F G QVILPLA T+EHEE LEVI+LE      E+
Sbjct: 500 DPGVDAYSAASLRANPYAVPGLRAGGFMGNQVILPLARTLEHEECLEVIRLEGHGFSHEE 559

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPS 614
           ++M  D+FLLQLCSGVDENA G CA+LVFAPID SF+DDAP++PSGFR+IPLD+  D PS
Sbjct: 560 VLMSRDMFLLQLCSGVDENAPGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDVPS 619

Query: 615 PNRTLDLASALEVGPTGN-KASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYV 673
             RTLDLASALEVG  G  +A  DSS  C +T+SV+TIAFQF+FE HL+++VA+MARQYV
Sbjct: 620 ATRTLDLASALEVGSGGGLRALSDSSGTC-TTRSVLTIAFQFSFENHLRDSVAAMARQYV 678

Query: 674 RGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           RG++ASVQRVA+A++PSR G +  L+ PPGSPEA  LA WI +SYR
Sbjct: 679 RGVMASVQRVAMAIAPSRLGPHIELKHPPGSPEALALATWIGRSYR 724


>gi|109729912|tpg|DAA05770.1| TPA_inf: class III HD-Zip III protein HB8 [Zea mays]
 gi|413947684|gb|AFW80333.1| putative homeobox/bZIP/lipid-binding protein family [Zea mays]
          Length = 858

 Score =  988 bits (2554), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/726 (69%), Positives = 598/726 (82%), Gaps = 37/726 (5%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+R+CP+L++++PKQIKVWFQNRRCR
Sbjct: 14  MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRDCPVLASVDPKQIKVWFQNRRCR 73

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKE+SRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN ++RQQTQ+A  LATTDT
Sbjct: 74  EKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYYRQQTQSAG-LATTDT 132

Query: 142 SCESVVTSGQHHLT---PQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           SCESVVTSG  ++    PQ Q    PRDA PAGL+SIAEETLTEFLSKATGTAVEWVQMP
Sbjct: 133 SCESVVTSGPQNVAAVLPQAQ----PRDAGPAGLMSIAEETLTEFLSKATGTAVEWVQMP 188

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDSIGI+AISHGC GVAARACGLVG++P +VAE+LKDRP W RDCRS+EVVNVLP
Sbjct: 189 GMKPGPDSIGIIAISHGCPGVAARACGLVGMEPAKVAEVLKDRPLWLRDCRSMEVVNVLP 248

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
            G+SGT+ELLYMQLYAPTTLAPARDFWLLRYTS+L+DGSLVVCERSL   Q GPSMP   
Sbjct: 249 AGTSGTVELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLGANQGGPSMPLVQ 308

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
            FVR EMLPSG+L+RP +GGGS+IHIVDHMDLEPWSVPEV+RPLYESS ++AQK +MAAL
Sbjct: 309 PFVRGEMLPSGFLVRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKMSMAAL 368

Query: 379 RHLRQISQEVSQPSVT--GWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
           R+LRQ++ E +  SV   GWGR+PA+LRALSQ+L+RGFNEALNG  D+GWS++ SDG+DD
Sbjct: 369 RYLRQVAHEDTAHSVVTGGWGRQPASLRALSQKLTRGFNEALNGLADDGWSVVGSDGVDD 428

Query: 437 VTVHVNSSPSKMMGVQLSYVNG--FPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEW 494
           V V V+SSPS+++    ++ NG    + S++VLCAKASMLLQDV P  LLRF+RE RS+W
Sbjct: 429 VCVSVSSSPSRVVSCNATFSNGPVVGTGSSSVLCAKASMLLQDVSPPELLRFMREQRSQW 488

Query: 495 ADSSIDAYSAAAVKAGPCSLPV-PRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRE 553
           ADS++DA+ A+A+K   CSLP+ PR G FGGQVILPLAHT + EEFLEVIK+ N  +Y +
Sbjct: 489 ADSNLDAFFASAMKPDFCSLPIPPRLGGFGGQVILPLAHTFDPEEFLEVIKVGNAGNY-Q 547

Query: 554 DMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTP 613
           D ++  D+FLLQ+ +GVDEN  G C+EL+FAPIDASFSDD+P++PSGFRIIP+D+  DT 
Sbjct: 548 DALLHRDLFLLQMYNGVDENMAGTCSELIFAPIDASFSDDSPLLPSGFRIIPIDAPLDTS 607

Query: 614 SPNRTLDLASALEVG-----PTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASM 668
           SP  TLDLAS LE G      +G+   G ++  C  +K+V+TI FQFAFE HLQ++VA+M
Sbjct: 608 SPKCTLDLASTLEAGTPRSRTSGSGGPGTAAAACAGSKAVMTIVFQFAFESHLQDSVAAM 667

Query: 669 ARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAH----------TLARWICQSY 718
           ARQYVR I+ASVQR+ALALS +R      L  P GS  +H          TLARWICQSY
Sbjct: 668 ARQYVRSIVASVQRIALALSSAR------LVVPHGSGVSHGAPAAGPEAATLARWICQSY 721

Query: 719 RCVFYF 724
           R  F+F
Sbjct: 722 R--FHF 725


>gi|255578153|ref|XP_002529946.1| DNA binding protein, putative [Ricinus communis]
 gi|223530576|gb|EEF32454.1| DNA binding protein, putative [Ricinus communis]
          Length = 842

 Score =  988 bits (2553), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/730 (67%), Positives = 579/730 (79%), Gaps = 25/730 (3%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MA++    R++      K + D+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 1   MAMAMVQHRETSSGSINKHLTDSGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECP 60

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV 
Sbjct: 61  ILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 120

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETL 180
           EN + RQQ Q A+  A TD SC+SVVT+ QH L          RDA+ PAGLLSIAEETL
Sbjct: 121 ENGYMRQQLQTAS--AATDASCDSVVTTPQHSL----------RDANNPAGLLSIAEETL 168

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
            EFLSKATGTAV+WVQMPGMKPGPDS+GI AIS  C+GVAARACGLV L+PT++AEILKD
Sbjct: 169 AEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKD 228

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSW+RDCRS+EV  + P G+ GTIEL+Y Q+YAPTTLAPARDFW LRYTS L++GSLVV
Sbjct: 229 RPSWFRDCRSLEVFTMFPAGNGGTIELVYSQVYAPTTLAPARDFWTLRYTSSLDNGSLVV 288

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSL+ +  GP+   A  FVRAEMLPSGYLIRPC+GGGSIIHIVDH++LE WSVPEVLR
Sbjct: 289 CERSLSGSGAGPNAAAAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEAWSVPEVLR 348

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESS ++AQK T+AALR +RQI+QE S   V G GR+PA LR  SQRLSRGFN+A+NG
Sbjct: 349 PLYESSKVVAQKMTIAALRFIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAING 408

Query: 421 FTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
           F D+GWS++  DG +DV V +NS  +K +    +  N F  +   +LCAKASMLLQ+VPP
Sbjct: 409 FNDDGWSLMSCDGAEDVIVTINS--TKNLSSTSNAANSFAFL-GGILCAKASMLLQNVPP 465

Query: 481 AILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEF 539
           A+L+RFLREHRSEWAD ++DAYSAA++KAG  + P  R   F G Q+I+PL HTIEHEE 
Sbjct: 466 AVLVRFLREHRSEWADFNVDAYSAASLKAGSYAFPGMRPTRFTGSQIIMPLGHTIEHEEL 525

Query: 540 LEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPS 599
           LEVI+LE  +  +ED  +  DI LLQ+CSG+DENAVG C+ELVFAPID  F DDAP++PS
Sbjct: 526 LEVIRLEGHSLVQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLLPS 585

Query: 600 GFRIIPLDSG----KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
           GFRIIPLDS     +D  + +RTLDL S+LEVGP  N  +GD+S+   ST+SV+TIAFQF
Sbjct: 586 GFRIIPLDSKTKDTQDALTTSRTLDLTSSLEVGPAANNTAGDASSS-QSTRSVLTIAFQF 644

Query: 656 AFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWIC 715
            FE +LQENVA+MARQYVR +I+SVQRVA+A+SPS  G   G +  PGSPEA TLA WIC
Sbjct: 645 PFESNLQENVATMARQYVRSVISSVQRVAMAISPSGLGPAVGPKLSPGSPEALTLAHWIC 704

Query: 716 QSYRCVFYFL 725
           QSY    Y+L
Sbjct: 705 QSYS---YYL 711


>gi|449433543|ref|XP_004134557.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ATHB-9-like [Cucumis sativus]
          Length = 847

 Score =  988 bits (2553), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/701 (69%), Positives = 571/701 (81%), Gaps = 5/701 (0%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 14  MDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 73

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKE+SRLQ+VNRKL+AMNKLLMEENDRLQKQVS LVYEN F RQQ  +A+   TTD 
Sbjct: 74  EKQRKESSRLQSVNRKLSAMNKLLMEENDRLQKQVSHLVYENGFMRQQLHSASG-TTTDN 132

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
           SCESVV SGQ         QHP RD + PAGLL++AEETL EFLSKATGTAV+WVQM GM
Sbjct: 133 SCESVVMSGQPQQQQNPNPQHPNRDVNNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGM 192

Query: 201 KPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTG 260
           KPGPDSIGIVA+S  C+GVAARACGLV L+PT+VAEILKDR SWYRDCR + V++V+PTG
Sbjct: 193 KPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRLSWYRDCRCLNVLSVIPTG 252

Query: 261 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHF 320
           + GTIEL+YMQ YAPTTLA ARDFW +RYT+ LEDGSLVVCERSL+++  GP+ P    F
Sbjct: 253 NGGTIELIYMQTYAPTTLAAARDFWTMRYTTSLEDGSLVVCERSLSSSSGGPAGPPPSTF 312

Query: 321 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH 380
           VRAEMLPSGYLIR CEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS ++AQK T+AALRH
Sbjct: 313 VRAEMLPSGYLIRACEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKITIAALRH 372

Query: 381 LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
           +RQI+QE +       GR+PA LR  SQ+L RGFN+A+NGF D+GWS + SDG++DVT+ 
Sbjct: 373 IRQIAQETNGEIQCTGGRQPAVLRTFSQKLCRGFNDAVNGFADDGWSPMGSDGVEDVTIL 432

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSID 500
           +N+S +K  G Q +  + +PS    V+CAKASMLLQ+VPPA+L+RFLREHRSEWAD  +D
Sbjct: 433 INTSANKFSGSQYN-TSLYPSFGGGVMCAKASMLLQNVPPALLVRFLREHRSEWADYGVD 491

Query: 501 AYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMP- 558
           AYSAA++KA P ++P  R G F   QVILPLA T+EHEEFLEV++LE +A +        
Sbjct: 492 AYSAASLKASPYAVPCARPGGFPSSQVILPLATTVEHEEFLEVVRLEGLAFFFFAFXXYL 551

Query: 559 SDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRT 618
             IF  QLCSGVDENAVG CA+LVFAPID SF+DDAP++PSGFR+IPLD   D P+  RT
Sbjct: 552 FSIFSWQLCSGVDENAVGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKTDEPTAART 611

Query: 619 LDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA 678
           LDLAS LEVG    +++G++     + +SV+TIAFQF FE HLQENVA+MARQYVR ++ 
Sbjct: 612 LDLASTLEVGANAARSAGETDLSNYNLRSVLTIAFQFTFENHLQENVAAMARQYVRSVVG 671

Query: 679 SVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           SVQRVA+A+SPSR  SN GL+P PGSPEA TLARWIC+SYR
Sbjct: 672 SVQRVAMAISPSRLSSNMGLKPLPGSPEALTLARWICRSYR 712


>gi|158252034|gb|ABW24026.1| class III HD-Zip protein 8 [Eucommia ulmoides]
          Length = 533

 Score =  983 bits (2540), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/540 (87%), Positives = 505/540 (93%), Gaps = 7/540 (1%)

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF 126
           EPKQIKVWFQNRRCREKQRKEASRL+AVNRKLTAMNKLLMEENDRLQKQVSQLVYEN++F
Sbjct: 1   EPKQIKVWFQNRRCREKQRKEASRLRAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYF 60

Query: 127 RQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSK 186
           RQQTQNA TLATTDTSCESVVTSGQH LT     QHPPRDASPAGL+SIAEETLTEFLSK
Sbjct: 61  RQQTQNA-TLATTDTSCESVVTSGQHQLT-----QHPPRDASPAGLMSIAEETLTEFLSK 114

Query: 187 ATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR 246
           ATGTAVEWVQMPGMKPGPDSIGI+AISHGCTGVA+RACGLVGL+P+RVA+ILKDR SW+R
Sbjct: 115 ATGTAVEWVQMPGMKPGPDSIGIIAISHGCTGVASRACGLVGLEPSRVADILKDRLSWFR 174

Query: 247 DCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN 306
           DCR+V V+NVL T + GTIEL+YMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN
Sbjct: 175 DCRAVNVLNVLSTANGGTIELIYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN 234

Query: 307 NTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS 366
           NTQNGPSMP   HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS
Sbjct: 235 NTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS 294

Query: 367 TLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW 426
           TL++Q+TTMAALR LRQISQEVSQP V  WGRRPAALRALSQRLS+GFNEA+NGFTDEGW
Sbjct: 295 TLLSQRTTMAALRQLRQISQEVSQPVVANWGRRPAALRALSQRLSKGFNEAVNGFTDEGW 354

Query: 427 SMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
           SM+ESDGIDDVTV VNSSP KMM   LSY NGFPS+ NAVLCAKASMLLQ+VPPAILLRF
Sbjct: 355 SMIESDGIDDVTVLVNSSPGKMMSGDLSYTNGFPSV-NAVLCAKASMLLQNVPPAILLRF 413

Query: 487 LREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLE 546
           LREHRSEWADS ID+YSA+AVKA PC LPV RAG FGGQVILPLAHTIEHEEF+EVIKLE
Sbjct: 414 LREHRSEWADSGIDSYSASAVKAVPCCLPVSRAGYFGGQVILPLAHTIEHEEFMEVIKLE 473

Query: 547 NMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPL 606
           NMAH++EDMIM +DIFLLQLCSGVDE ++G C EL+FAPIDASFSD+AP++PSGFRIIPL
Sbjct: 474 NMAHFQEDMIMANDIFLLQLCSGVDEKSIGTCVELIFAPIDASFSDNAPLLPSGFRIIPL 533


>gi|187609456|sp|Q5QMZ9.2|HOX29_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX29; AltName:
           Full=HD-ZIP protein HOX29; AltName: Full=Homeodomain
           transcription factor HOX29; AltName: Full=OSHB5;
           AltName: Full=OsHox29
 gi|187369569|dbj|BAG31403.1| class III homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
          Length = 868

 Score =  983 bits (2540), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/733 (67%), Positives = 590/733 (80%), Gaps = 35/733 (4%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 8   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 67

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN----------------TF 125
           EKQRKE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVY++                  
Sbjct: 68  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 127

Query: 126 FRQQTQNAATLAT-TDTSCESVVTSGQHHLTPQQQH-QHPPRDASPAGLLSIAEETLTEF 183
            +        LAT TDTSCESVVTSG HH   Q    Q PPRDASPAGL+SIAEETLTEF
Sbjct: 128 PQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLTEF 187

Query: 184 LSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPS 243
           LSKATGTAVEW+QMPGMKPGPDSIGI+AISHGC GVAARACGLVG++P +VAEILKDRP 
Sbjct: 188 LSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPL 247

Query: 244 WYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCER 303
           W RDCRS++VVNVLP G++GTIELLYMQLYAPTTLAPARDFWLLRYTS+L+DGSLVVCER
Sbjct: 248 WLRDCRSMDVVNVLPAGANGTIELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCER 307

Query: 304 SLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 363
           SL++ Q GPSMP    F+R EMLPSG+LIRP + GGS+IHIVDHMDLEPWSVPEV+RPLY
Sbjct: 308 SLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDVGGSVIHIVDHMDLEPWSVPEVVRPLY 367

Query: 364 ESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTD 423
           ESS ++AQK +MAALR+LRQ++ E ++  +TGWGR+PAALRALSQ+L+RGFNEALNG  D
Sbjct: 368 ESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGRQPAALRALSQKLTRGFNEALNGLAD 427

Query: 424 EGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAIL 483
           +GWS++ESDG+DDV + VNS  SK++G   ++ +G P +S  VLCAKASMLLQDV P  L
Sbjct: 428 DGWSVIESDGVDDVCISVNS--SKVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPPSL 485

Query: 484 LRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVI 543
           L+FLREHRS+WADS++DA+ A+ +K   C+LP+ R G F GQVILPLAHT E EEFLEVI
Sbjct: 486 LQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSGQVILPLAHTFEPEEFLEVI 545

Query: 544 KLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRI 603
           KL N ++Y +D ++  D+FLLQ+ +GV+E++ G C+EL+FAPIDASFSDD+P++PSGFRI
Sbjct: 546 KLGNASNY-QDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSGFRI 604

Query: 604 IPLDSGKDTPSPNRTLDLASALEVGPTGNK--------ASGDSSTQCGSTKSVITIAFQF 655
           IP+DS  DT SPN TLDLAS LE     ++            ++    S+K+V+TIAFQF
Sbjct: 605 IPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVNGGGGGCAAAAASSSSKAVMTIAFQF 664

Query: 656 AFEMHLQENVASMARQYVRGIIASVQRVALALSPSRF----GSNAGLRPPPGSPEAHTLA 711
           AF+ HLQ++VA+MARQY+R II+SVQR+A+ALS SR        A  +  P +PEA TL 
Sbjct: 665 AFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAGAAAAQLSPVTPEAATLP 724

Query: 712 RWICQSYRCVFYF 724
           RWICQSYR  F+F
Sbjct: 725 RWICQSYR--FHF 735


>gi|402575788|gb|AFQ69084.1| HB8, partial [Pisum sativum]
          Length = 550

 Score =  982 bits (2538), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/566 (84%), Positives = 514/566 (90%), Gaps = 17/566 (3%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M VSSG     +D  G K+ MDNGKYVRYTPEQVEALERLYHECPKP+S+RRQQLIRECP
Sbjct: 1   MTVSSG----CKD--GSKIAMDNGKYVRYTPEQVEALERLYHECPKPTSLRRQQLIRECP 54

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILS+IEPKQIKVWFQNRRCREKQRKEA RLQAVNRKLTAMNKLLMEENDRLQKQVS LVY
Sbjct: 55  ILSHIEPKQIKVWFQNRRCREKQRKEAGRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVY 114

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLT 181
           EN+ FRQ T N A +ATTDTSCESVVTSGQ         QHPPRDASPAGLLSIAEETL 
Sbjct: 115 ENSVFRQHTPNGA-IATTDTSCESVVTSGQ---------QHPPRDASPAGLLSIAEETLA 164

Query: 182 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDR 241
           EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHG  GVAARACGLVGL+P RVAEILKDR
Sbjct: 165 EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGSPGVAARACGLVGLEPARVAEILKDR 224

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 301
            +WYRDCR+V+V+NV+ TG+ GTIELLYMQLYAPTTLAP RDFWLLRYTS+LEDGSLVVC
Sbjct: 225 LAWYRDCRTVDVLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVC 284

Query: 302 ERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 361
           ERSLNN QNGPSMP  PHFVRA++LPSGYLIRPCEGGGSIIHIVDHM LEPWSVPEVLRP
Sbjct: 285 ERSLNNIQNGPSMPPVPHFVRADVLPSGYLIRPCEGGGSIIHIVDHMLLEPWSVPEVLRP 344

Query: 362 LYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
           LYESS L+AQ+TTMAALRHLRQISQEVSQPSVTGWGRRPAALR LSQRLS+GFNEA+NGF
Sbjct: 345 LYESSMLLAQRTTMAALRHLRQISQEVSQPSVTGWGRRPAALRTLSQRLSKGFNEAVNGF 404

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVN-GFPSMSNAVLCAKASMLLQDVPP 480
           TD+GWSMLESDGIDDVT+ VNSSPSKMMG+   Y N GFPS++++VLCAKASMLLQ+VPP
Sbjct: 405 TDDGWSMLESDGIDDVTLIVNSSPSKMMGINNGYNNSGFPSVTSSVLCAKASMLLQNVPP 464

Query: 481 AILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFL 540
           AILLRFLREHRSEWAD+SIDAYSAAA+KAGPCSLP  R G+FGGQVILPLAHTIEHEEF+
Sbjct: 465 AILLRFLREHRSEWADTSIDAYSAAAIKAGPCSLPGTRPGSFGGQVILPLAHTIEHEEFM 524

Query: 541 EVIKLENMAHYREDMIMPSDIFLLQL 566
           EVIKLENM +YR+DM MP DIFLLQL
Sbjct: 525 EVIKLENMGYYRDDMTMPGDIFLLQL 550


>gi|356528394|ref|XP_003532788.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Glycine max]
          Length = 849

 Score =  980 bits (2533), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/726 (65%), Positives = 574/726 (79%), Gaps = 10/726 (1%)

Query: 13  RDSGGQKM-IMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQI 71
           RDS   K  +MD GKYVRYTPEQVEALER+Y ECPKPSS RRQQ+IRECP+L+NIE KQI
Sbjct: 7   RDSASNKQQLMDCGKYVRYTPEQVEALERVYIECPKPSSSRRQQIIRECPLLANIETKQI 66

Query: 72  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQ 131
           KVWFQNRRCREKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVSQLVY+N F +QQ  
Sbjct: 67  KVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVYDNGFMKQQIH 126

Query: 132 NAATLATTDTSCESVVTSGQ-HHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATG 189
            A+   TTD SCESVV SGQ  H  P+ QH  P  DA+ PAGLL+IA+ETL  FLSKATG
Sbjct: 127 TASATTTTDNSCESVVVSGQRQHQNPKIQH--PQWDANNPAGLLAIAQETLAAFLSKATG 184

Query: 190 TAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCR 249
           TAV WVQM GMKPGPDSIGIVA+S  C+GVAARACGLV L+PT+VAEILKDRPSWYRDCR
Sbjct: 185 TAVNWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCR 244

Query: 250 SVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQ 309
            + V++V+PTG+ GTIEL+YMQ YAPTTLA ARDFW LRYT+ LEDGSLV+CERSL ++ 
Sbjct: 245 CLNVLSVIPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSST 304

Query: 310 NGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLI 369
            GP+ P A +FVRAEMLPSGYLIR CEGGGSI+HIVDH+DL+ WSVPEVLRPLYES   +
Sbjct: 305 GGPTGPAASNFVRAEMLPSGYLIRSCEGGGSIVHIVDHVDLDVWSVPEVLRPLYESPKFL 364

Query: 370 AQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSML 429
           AQK T AALR++RQI+QE S     G GR+PA LR  SQRL +GFN+A+NGF D+GWS++
Sbjct: 365 AQKLTTAALRNVRQIAQESSGEVQYGGGRQPAVLRTFSQRLCKGFNDAVNGFVDDGWSLM 424

Query: 430 ESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE 489
            +DG++DVT+ +NSSP+K      +  +  P+    VLCAKASMLLQ+VPPA+L+RFLRE
Sbjct: 425 GNDGVEDVTIGINSSPNKFFSSHYN-TSMLPAFGGGVLCAKASMLLQNVPPALLVRFLRE 483

Query: 490 HRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENM 548
           HRSEWA+  +DAYS+A +KA P ++P  R   F    VI+PLAHTIEHEEFLEV+++E  
Sbjct: 484 HRSEWANYGVDAYSSACLKASPYAVPCARPSGFPSSHVIIPLAHTIEHEEFLEVVRIEGN 543

Query: 549 AHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDS 608
           A   +D+ +  D++L+QLCSG+DENA+G CA+LVFAPID SF+DDA ++PSGFRIIPLD 
Sbjct: 544 AFPPDDVALACDMYLMQLCSGIDENAIGACAQLVFAPIDESFADDALLLPSGFRIIPLDP 603

Query: 609 GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASM 668
             D P+  RTLDLAS LE G    +++G+S     + +SV+TIAFQF FE HL++NVA M
Sbjct: 604 KTDGPASTRTLDLASTLETGSGNARSAGESDLNNYNLRSVLTIAFQFTFENHLRDNVAVM 663

Query: 669 ARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR---CVFYFL 725
           ARQYVR ++ SVQRVA+A++PSR  +  G +  PG PEA TLARWIC+SY    C   F 
Sbjct: 664 ARQYVRNVVRSVQRVAMAIAPSRISTQLGPKSLPGPPEALTLARWICKSYSLHTCTELFS 723

Query: 726 FDASSA 731
            +++S 
Sbjct: 724 VESTSG 729


>gi|414877999|tpg|DAA55130.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 953

 Score =  979 bits (2530), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/729 (67%), Positives = 594/729 (81%), Gaps = 19/729 (2%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           M AV+S      R S G    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQ LIR+C
Sbjct: 100 MAAVAS----RERLSPGAAPQVDAGKYVRYTPEQVEALERVYSECPKPSSLRRQHLIRDC 155

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           PIL NIEPKQIKVWFQNRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVS+LV
Sbjct: 156 PILRNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSRLV 215

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQ---HPP-RDAS-PAGLLSI 175
           ++N + + +  ++ ++ATTDTSCESVVTSGQH+   QQQ+    HPP RDA+ PAGLL+I
Sbjct: 216 FDNGYMKNRL-HSPSVATTDTSCESVVTSGQHN---QQQNPAVLHPPQRDANNPAGLLAI 271

Query: 176 AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVA 235
           AEETL EF+SKATGTAV WVQM GMKPGPDS+GI+A+SH C+GVAARACGLV L+PT+VA
Sbjct: 272 AEETLAEFMSKATGTAVNWVQMVGMKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVA 331

Query: 236 EILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLED 295
           EILKDR SWYRDCR V+V++V+PTG+ GTIEL+YMQ YA TTLA  RDFW LRYTS L+D
Sbjct: 332 EILKDRASWYRDCRHVDVLHVIPTGNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDD 391

Query: 296 GSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 355
           GSLV+CERSL  +  GPS P  P+F+RAE+LPSGYLIRPC+GGGS+I+IVDH++L   SV
Sbjct: 392 GSLVICERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCDGGGSMIYIVDHVNLNACSV 451

Query: 356 PEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFN 415
           PEVLRPLYES  ++AQK T AALRH+RQI+ E S     G GR+PA LR  SQRLSRGFN
Sbjct: 452 PEVLRPLYESPKILAQKMTAAALRHIRQIAHESSGEMPYGAGRQPAVLRTFSQRLSRGFN 511

Query: 416 EALNGFTDEGWS-MLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASML 474
           +A++GF D+GWS +L +DG +D+TV +NSSP+K++G  +S    F +M   ++CAKASML
Sbjct: 512 DAVSGFPDDGWSCLLNTDGAEDITVTINSSPNKLVGSHVSASPLFSAMGGGIMCAKASML 571

Query: 475 LQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHT 533
           LQ+VPPA+L+RFLREHRSEWAD  IDAYS A+++A P ++P  RAG F G QVILPLA T
Sbjct: 572 LQNVPPALLVRFLREHRSEWADPGIDAYSVASLRANPYTVPGLRAGGFMGNQVILPLART 631

Query: 534 IEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDD 593
           +EHEE LEVI+LE      E+++M  D+FLLQLCSGVDE+A G CA+LVFAPID SF+DD
Sbjct: 632 LEHEESLEVIRLEGHGFSHEEVLMSRDMFLLQLCSGVDEDAPGACAQLVFAPIDESFADD 691

Query: 594 APIIPSGFRIIPLDSGKDTPSP-NRTLDLASALEVGPTGN--KASGDSSTQCGSTKSVIT 650
           AP++PSGFR+IPLD+  D P+   RTLDLASALEVG  G+  +AS D S  C +T+SV+T
Sbjct: 692 APLLPSGFRVIPLDAKTDVPTATTRTLDLASALEVGSGGSGMRASCDGSGTC-ATRSVLT 750

Query: 651 IAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTL 710
           IAFQF+FE HL+E+VA+MA+QYVRG++ASVQRVA+A++PSR GS   L+ PPGSPEA  L
Sbjct: 751 IAFQFSFENHLRESVAAMAKQYVRGVMASVQRVAMAIAPSRLGSRIELKHPPGSPEALAL 810

Query: 711 ARWICQSYR 719
           A WI +SYR
Sbjct: 811 ATWIGRSYR 819


>gi|125524797|gb|EAY72911.1| hypothetical protein OsI_00785 [Oryza sativa Indica Group]
          Length = 886

 Score =  978 bits (2529), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/764 (65%), Positives = 594/764 (77%), Gaps = 72/764 (9%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN----------------TF 125
           EKQRKE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVY++                  
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 126 FRQQTQNAATLAT-TDTSCESVVTSGQHHLTPQQQH-QHPPRDASPAGLLSIAEETLTEF 183
            +        LAT TDTSCESVVTSG HH   Q    Q PPRDASPAGL+SIAEETLTEF
Sbjct: 121 PQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLTEF 180

Query: 184 LSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPS 243
           LSKATGTAVEW+QMPGMKPGPDSIGI+AISHGC GVAARACGLVG++P +VAEILKDRP 
Sbjct: 181 LSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPL 240

Query: 244 WYRDCRSVEVVNVLPTGSSGTIELLYMQ-------------------------LYAPTTL 278
           W RDCRS++VVNVLP G++GTIELLYMQ                         LYAPTTL
Sbjct: 241 WLRDCRSMDVVNVLPAGANGTIELLYMQARTHKPENSEPEPEILKLKFVFDLQLYAPTTL 300

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
           APARDFWLLRYTS+L+DGSLVVCERSL++ Q GPSMP    F+R EMLPSG+LIRP +GG
Sbjct: 301 APARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGG 360

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGR 398
           GS+IHIVDHMDLEPWSVPEV+RPLYESS ++AQK +MAALR+LRQ++ E ++  +TGWGR
Sbjct: 361 GSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGR 420

Query: 399 RPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNG 458
           +PAALRALSQ+L+RGFNEALNG  D+GWS++ESDG+DDV + VNS  SK++G   ++ +G
Sbjct: 421 QPAALRALSQKLTRGFNEALNGLADDGWSVIESDGVDDVCISVNS--SKVIGCNATFSSG 478

Query: 459 FPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPR 518
            P +S  VLCAKASMLLQDV P  LL+FLREHRS+WADS++DA+ A+A+K   C+LP+ R
Sbjct: 479 LPIVSTGVLCAKASMLLQDVSPPSLLQFLREHRSQWADSNLDAFFASAMKPNFCNLPMSR 538

Query: 519 AGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNC 578
            G F GQVILPLAHT E EEFLEVIKL N ++Y +D ++  D+FLLQ+ +GV+E++ G C
Sbjct: 539 LGGFSGQVILPLAHTFEPEEFLEVIKLGNASNY-QDTLVHRDLFLLQMYNGVEESSAGTC 597

Query: 579 AELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEV--------GPT 630
           +EL+FAPIDASFSDD+P++PSGFRIIP+DS  DT SPN TLDLAS LE         G  
Sbjct: 598 SELIFAPIDASFSDDSPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVN 657

Query: 631 GNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPS 690
           G   +  ++    S+K+V+TIAFQFAF+ HLQ++VA+MARQY+R II+SVQR+A+ALS S
Sbjct: 658 GGGGTCAAAAASSSSKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSS 717

Query: 691 RFGSNAGLRPP----------PGSPEAHTLARWICQSYRCVFYF 724
           R      L PP          P +PEA TL RWICQSYR  F+F
Sbjct: 718 R------LVPPGAAAAAAQLSPVTPEAATLPRWICQSYR--FHF 753


>gi|222625436|gb|EEE59568.1| hypothetical protein OsJ_11861 [Oryza sativa Japonica Group]
          Length = 807

 Score =  978 bits (2529), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/667 (70%), Positives = 559/667 (83%), Gaps = 5/667 (0%)

Query: 56  LIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQ 115
           LIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQ
Sbjct: 10  LIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQ 69

Query: 116 VSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLS 174
           VS+LVYEN + RQQ  N  ++ATTDTSCESVVTSGQHH         P RDA+ PAGLL+
Sbjct: 70  VSRLVYENGYMRQQLHNP-SVATTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLA 128

Query: 175 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRV 234
           IAEETL EFLSKATGTAV+WVQM GMKPGPDSIGI+A+SH C+GVAARACGLV L+PT+V
Sbjct: 129 IAEETLAEFLSKATGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKV 188

Query: 235 AEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLE 294
           AEILKDRPSWYRDCR V+V++V+PTG+ GTIEL+YMQ YAPTTLA  RDFW+LRYTS LE
Sbjct: 189 AEILKDRPSWYRDCRCVDVLHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLE 248

Query: 295 DGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWS 354
           DGSLV+CERSL  +  GPS P  P+FVRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WS
Sbjct: 249 DGSLVICERSLTQSTGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWS 308

Query: 355 VPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGF 414
           VPEVLRPLYES  ++AQK T+AALRH+RQI+ E S     G GR+PA LR  SQRLSRGF
Sbjct: 309 VPEVLRPLYESPKILAQKMTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGF 368

Query: 415 NEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASML 474
           N+A+NGF D+GWS++ SDG +DVT+  NSSP+K++G  ++    F ++   +LCAKASML
Sbjct: 369 NDAVNGFPDDGWSLMSSDGAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASML 428

Query: 475 LQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHT 533
           LQ+VPPA+L+RFLREHRSEWAD  +DAYSAAA++A P ++P  RAG F G QVILPLAHT
Sbjct: 429 LQNVPPALLVRFLREHRSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHT 488

Query: 534 IEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDD 593
           +EHEEFLEVI+LE  +   +++++  D++LLQLCSGVDENA G CA+LVFAPID SF+DD
Sbjct: 489 LEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADD 548

Query: 594 APIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTG-NKASGDSSTQCGSTKSVITIA 652
           AP++PSGFR+IPLD   D PS  RTLDLAS LEVG  G  +AS D+S+ C +T+SV+TIA
Sbjct: 549 APLLPSGFRVIPLDGKTDAPSATRTLDLASTLEVGSGGTTRASSDTSSTC-NTRSVLTIA 607

Query: 653 FQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLAR 712
           FQF++E HL+E+VA+MARQYVR ++ASVQRVA+A++PSR G     + PPGSPEAHTLAR
Sbjct: 608 FQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLAR 667

Query: 713 WICQSYR 719
           WI +SYR
Sbjct: 668 WIGRSYR 674


>gi|226502384|ref|NP_001142394.1| uncharacterized protein LOC100274567 [Zea mays]
 gi|224030609|gb|ACN34380.1| unknown [Zea mays]
 gi|323388783|gb|ADX60196.1| HB homeobox transcription factor [Zea mays]
          Length = 854

 Score =  978 bits (2528), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/717 (67%), Positives = 589/717 (82%), Gaps = 15/717 (2%)

Query: 13  RDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 72
           R S G    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQ LIR+CPIL NIEPKQIK
Sbjct: 9   RLSPGAAPQVDAGKYVRYTPEQVEALERVYSECPKPSSLRRQHLIRDCPILRNIEPKQIK 68

Query: 73  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
           VWFQNRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVS+LV++N + + +  +
Sbjct: 69  VWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVFDNGYMKNRL-H 127

Query: 133 AATLATTDTSCESVVTSGQHHLTPQQQHQ---HPP-RDAS-PAGLLSIAEETLTEFLSKA 187
           + ++ATTDTSCESVVTSGQH+   QQQ+    HPP RDA+ PAGLL+IAEETL EF+SKA
Sbjct: 128 SPSVATTDTSCESVVTSGQHN---QQQNPAVLHPPQRDANNPAGLLAIAEETLAEFMSKA 184

Query: 188 TGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD 247
           TGTAV WVQM GMKPGPDS+GI+A+SH C+GVAARACGLV L+PT+VAEILKDR SWYRD
Sbjct: 185 TGTAVNWVQMVGMKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRASWYRD 244

Query: 248 CRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN 307
           CR V+V++V+PTG+ GTIEL+YMQ YA TTLA  RDFW LRYTS L+DGSLV+CERSL  
Sbjct: 245 CRHVDVLHVIPTGNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTQ 304

Query: 308 TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 367
           +  GPS P  P+F+RAE+LPSGYLIRPC+GGGS+I+IVDH++L   SVPEVLRPLYES  
Sbjct: 305 STGGPSGPNTPNFIRAEVLPSGYLIRPCDGGGSMIYIVDHVNLNACSVPEVLRPLYESPK 364

Query: 368 LIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           ++AQK T AALRH+RQI+ E S     G GR+PA LR  SQRLSRGFN+A++GF D+GWS
Sbjct: 365 ILAQKMTAAALRHIRQIAHESSGEMPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWS 424

Query: 428 -MLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
            +L +DG +D+TV +NSSP+K++G  +S    F +M   ++CAKASMLLQ+VPPA+L+RF
Sbjct: 425 CLLNTDGAEDITVTINSSPNKLVGSHVSASPLFSAMGGGIMCAKASMLLQNVPPALLVRF 484

Query: 487 LREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKL 545
           LREHRSEWAD  IDAYS A+++A P ++P  RAG F G QVILPLA T+EHEE LEVI+L
Sbjct: 485 LREHRSEWADPGIDAYSVASLRANPYTVPGLRAGGFMGNQVILPLARTLEHEESLEVIRL 544

Query: 546 ENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
           E      E+++M  D+FLLQLCSGVDE+A G CA+LVFAPID SF+DDAP++PSGFR+IP
Sbjct: 545 EGHGFSHEEVLMSRDMFLLQLCSGVDEDAPGACAQLVFAPIDESFADDAPLLPSGFRVIP 604

Query: 606 LDSGKDTPSP-NRTLDLASALEVGPTGN--KASGDSSTQCGSTKSVITIAFQFAFEMHLQ 662
           LD+  D P+   RTLDLASALEVG  G+  +AS D S  C +T+SV+TIAFQF+FE HL+
Sbjct: 605 LDAKTDVPTATTRTLDLASALEVGSGGSGMRASCDGSGTC-ATRSVLTIAFQFSFENHLR 663

Query: 663 ENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           E+VA+MA+QYVRG++ASVQRVA+A++PSR GS   L+ PPGSPEA  LA WI +SYR
Sbjct: 664 ESVAAMAKQYVRGVMASVQRVAMAIAPSRLGSRIELKHPPGSPEALALATWIGRSYR 720


>gi|356539327|ref|XP_003538150.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Glycine
           max]
          Length = 842

 Score =  976 bits (2524), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/734 (66%), Positives = 571/734 (77%), Gaps = 33/734 (4%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MA+     R+S  SG     +D+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 1   MAMVVAQHRESSSSGSIDKHLDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECP 60

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV 
Sbjct: 61  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 120

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETL 180
           EN F RQQ    +   TTD SC+SVVT+ QH L          RDAS PAGLLSIAEETL
Sbjct: 121 ENGFMRQQLHTPSA-TTTDASCDSVVTTPQHTL----------RDASNPAGLLSIAEETL 169

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
           TEFLSKATGTAV+WVQMPGMKPGPDS+GI AIS  C+GVAARACGLV L+PT++AEILKD
Sbjct: 170 TEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKD 229

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSW+RDCRS+EV  + P G+ GTIEL+Y Q YAPTTLAPARDFW LRYT+ LE+GSLVV
Sbjct: 230 RPSWFRDCRSLEVFTMFPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVV 289

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSL+ +  GP+   A  FVRAE LPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLR
Sbjct: 290 CERSLSGSGTGPNPAAAAQFVRAETLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLR 349

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESS ++AQK T+AALR++RQI+QE S   V G GR+PA LR  SQRLSRGFN+A+NG
Sbjct: 350 PLYESSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNG 409

Query: 421 FTDEGWSMLESDGIDDVTVHVNS----SPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQ 476
           F D+GW++L  DG +DV + VNS    S +      L+++ G       +LCAKASMLLQ
Sbjct: 410 FNDDGWTVLNCDGAEDVIIAVNSTKNLSGTSNPASSLTFLGG-------ILCAKASMLLQ 462

Query: 477 DVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIE 535
           +VPPA+L+RFLREHRSEWAD ++DAYSAA++KAG  + P  R   F G Q+I+PL HTIE
Sbjct: 463 NVPPAVLVRFLREHRSEWADFNVDAYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIE 522

Query: 536 HEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAP 595
           HEE LEVI+LE  +  +ED  +  DI LLQ+CSG+DENAVG C+ELVFAPID  F DDAP
Sbjct: 523 HEEMLEVIRLEGHSLAQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAP 582

Query: 596 IIPSGFRIIPLDS----GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITI 651
           ++PSGFRIIPLDS     KD  + NRTLDL S  EVGP     +  SS+Q  +T+SV+TI
Sbjct: 583 LVPSGFRIIPLDSKPGDKKDAVATNRTLDLTSGFEVGPATTAGADASSSQ--NTRSVLTI 640

Query: 652 AFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLA 711
           AFQF F+  LQ+NVA MARQYVR +I+SVQRVA+A+SPS    + G +  PGSPEA TLA
Sbjct: 641 AFQFPFDSSLQDNVAVMARQYVRSVISSVQRVAMAISPSGINPSIGAKLSPGSPEAVTLA 700

Query: 712 RWICQSYRCVFYFL 725
            WICQSY    Y+L
Sbjct: 701 HWICQSYS---YYL 711


>gi|356542621|ref|XP_003539765.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform 2
           [Glycine max]
          Length = 844

 Score =  976 bits (2523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/725 (67%), Positives = 569/725 (78%), Gaps = 28/725 (3%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MA++    R+S  SG     +D+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 1   MAMAVAQHRESSSSGSIDKHLDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECP 60

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV 
Sbjct: 61  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 120

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETL 180
           EN F RQQ    +  ATTD SC+SVVT+ QH +          RDA+ PAGLLSIAEETL
Sbjct: 121 ENGFMRQQLHTPSA-ATTDASCDSVVTTPQHTM----------RDANNPAGLLSIAEETL 169

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
           TEFLSKATGTAV+WVQMPGMKPGPDS+GI AIS  C+GVAARACGLV L+PT++AEILKD
Sbjct: 170 TEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKD 229

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSW+RDCRS+EV  + P G+ GTIEL+Y Q YAPTTLAPARDFW LRYT+ LE+GSLVV
Sbjct: 230 RPSWFRDCRSLEVFTMFPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVV 289

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSL+ +  GP+   A  FVRAE LPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLR
Sbjct: 290 CERSLSGSGTGPNPAAAAQFVRAETLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLR 349

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESS ++AQK T+AALR++RQI+QE S   V G GR+PA LR  SQRLSRGFN+A+NG
Sbjct: 350 PLYESSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNG 409

Query: 421 FTDEGWSMLESDGIDDVTVHVNS----SPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQ 476
           F D+GW++L  DG +DV + VNS    S +      L+++ G       +LCAKASMLLQ
Sbjct: 410 FNDDGWTVLNCDGAEDVFIAVNSTKNLSGTSNPASSLTFLGG-------ILCAKASMLLQ 462

Query: 477 DVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIE 535
           +VPPA+L+RFLREHRSEWAD S+DAYSAA++KAG  + P  R   F G Q+I+PL HTIE
Sbjct: 463 NVPPAVLVRFLREHRSEWADFSVDAYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIE 522

Query: 536 HEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAP 595
           HEE LEVI+LE  +  +ED  +  DI LLQ+CSG+DENAVG C+ELVFAPID  F DDAP
Sbjct: 523 HEEMLEVIRLEGHSLAQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAP 582

Query: 596 IIPSGFRIIPLDSG--KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAF 653
           +IPSGFRIIPLDS   K   S NRTLDL S  EVGP     +  SS+Q  +T+SV+TIAF
Sbjct: 583 LIPSGFRIIPLDSKPVKFCSSVNRTLDLTSGFEVGPATTAGTDASSSQ--NTRSVLTIAF 640

Query: 654 QFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARW 713
           QF F+  LQ+NVA MARQYVR +I+SVQRVA+A+SPS    + G +  PGSPEA TLA W
Sbjct: 641 QFPFDSSLQDNVAVMARQYVRSVISSVQRVAMAISPSGISPSVGAKLSPGSPEAVTLAHW 700

Query: 714 ICQSY 718
           ICQSY
Sbjct: 701 ICQSY 705


>gi|356542619|ref|XP_003539764.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform 1
           [Glycine max]
          Length = 845

 Score =  976 bits (2522), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/726 (67%), Positives = 569/726 (78%), Gaps = 29/726 (3%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MA++    R+S  SG     +D+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 1   MAMAVAQHRESSSSGSIDKHLDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECP 60

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV 
Sbjct: 61  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 120

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETL 180
           EN F RQQ    +  ATTD SC+SVVT+ QH +          RDA+ PAGLLSIAEETL
Sbjct: 121 ENGFMRQQLHTPSA-ATTDASCDSVVTTPQHTM----------RDANNPAGLLSIAEETL 169

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
           TEFLSKATGTAV+WVQMPGMKPGPDS+GI AIS  C+GVAARACGLV L+PT++AEILKD
Sbjct: 170 TEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKD 229

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSW+RDCRS+EV  + P G+ GTIEL+Y Q YAPTTLAPARDFW LRYT+ LE+GSLVV
Sbjct: 230 RPSWFRDCRSLEVFTMFPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVV 289

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSL+ +  GP+   A  FVRAE LPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLR
Sbjct: 290 CERSLSGSGTGPNPAAAAQFVRAETLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLR 349

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESS ++AQK T+AALR++RQI+QE S   V G GR+PA LR  SQRLSRGFN+A+NG
Sbjct: 350 PLYESSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNG 409

Query: 421 FTDEGWSMLESDGIDDVTVHVNS----SPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQ 476
           F D+GW++L  DG +DV + VNS    S +      L+++ G       +LCAKASMLLQ
Sbjct: 410 FNDDGWTVLNCDGAEDVFIAVNSTKNLSGTSNPASSLTFLGG-------ILCAKASMLLQ 462

Query: 477 DVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIE 535
           +VPPA+L+RFLREHRSEWAD S+DAYSAA++KAG  + P  R   F G Q+I+PL HTIE
Sbjct: 463 NVPPAVLVRFLREHRSEWADFSVDAYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIE 522

Query: 536 HEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAP 595
           HEE LEVI+LE  +  +ED  +  DI LLQ+CSG+DENAVG C+ELVFAPID  F DDAP
Sbjct: 523 HEEMLEVIRLEGHSLAQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAP 582

Query: 596 IIPSGFRIIPLDS---GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIA 652
           +IPSGFRIIPLDS    K   + NRTLDL S  EVGP     +  SS+Q  +T+SV+TIA
Sbjct: 583 LIPSGFRIIPLDSKPGDKKEVATNRTLDLTSGFEVGPATTAGTDASSSQ--NTRSVLTIA 640

Query: 653 FQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLAR 712
           FQF F+  LQ+NVA MARQYVR +I+SVQRVA+A+SPS    + G +  PGSPEA TLA 
Sbjct: 641 FQFPFDSSLQDNVAVMARQYVRSVISSVQRVAMAISPSGISPSVGAKLSPGSPEAVTLAH 700

Query: 713 WICQSY 718
           WICQSY
Sbjct: 701 WICQSY 706


>gi|356512574|ref|XP_003524993.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Glycine max]
          Length = 853

 Score =  973 bits (2514), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/727 (65%), Positives = 575/727 (79%), Gaps = 11/727 (1%)

Query: 13  RDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 72
           RDS   K++MD GKYVRYTPEQVEALER+Y ECPKPSS RRQQ+IRECP+L+NIE KQIK
Sbjct: 10  RDSASNKLLMDCGKYVRYTPEQVEALERVYVECPKPSSSRRQQIIRECPLLANIETKQIK 69

Query: 73  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
           VWFQNRRCREKQRKEASRLQ VNRKL++MNKLLMEENDRLQKQVSQLVY+N F +QQ   
Sbjct: 70  VWFQNRRCREKQRKEASRLQTVNRKLSSMNKLLMEENDRLQKQVSQLVYDNGFMKQQIHT 129

Query: 133 AATLATT--DTSCESVVTSGQHHLTPQQ-QHQHPPRDAS-PAGLLSIAEETLTEFLSKAT 188
           A+   TT  D SCESVV SGQH   PQ  + QHP  DA+ PAGLL+IA+ETL EFLSKAT
Sbjct: 130 ASATTTTTTDNSCESVVVSGQHQ--PQNPKTQHPQWDANNPAGLLAIAQETLVEFLSKAT 187

Query: 189 GTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDC 248
           GTAV WVQM GMKPGPDSIGIVA+S  C+GVAARACGLV L+PT+VAEILKDRPSWYRDC
Sbjct: 188 GTAVNWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDC 247

Query: 249 RSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           R + V++V+  G+ GTIEL+YMQ YAPTTLA ARDFW LRY++ LEDGSLV+CERSL ++
Sbjct: 248 RCLNVLSVVSAGNGGTIELMYMQTYAPTTLAAARDFWTLRYSTSLEDGSLVICERSLTSS 307

Query: 309 QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL 368
             GP+ P A +F+RAEMLPSGYLIR CEGGGSIIHIVDH+DL+ WSVPEVLRPLYES   
Sbjct: 308 TGGPTGPAASNFIRAEMLPSGYLIRSCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESPKF 367

Query: 369 IAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
           +AQK T AALRH RQI+QE S     G GR+PA LR  SQRL +GFN+A+NGF D+GWS+
Sbjct: 368 LAQKLTTAALRHARQIAQESSGDVHYGGGRQPAVLRTFSQRLCKGFNDAVNGFVDDGWSL 427

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           + +DG++DVT+ +NSSP+K  G   +  +  P+    V+CAKASMLLQ+VPPA+L+RFLR
Sbjct: 428 MGNDGVEDVTIAINSSPNKFFGSHYN-TSMLPAFGGGVMCAKASMLLQNVPPALLVRFLR 486

Query: 489 EHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLEN 547
           EHRSEWA+  +DAYS+A +KA P ++P  R   F    VI+PLAHTIEHEEFLEV+++E 
Sbjct: 487 EHRSEWANYEVDAYSSACLKASPYAVPCARPSGFPSSHVIIPLAHTIEHEEFLEVVRIEG 546

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
            A   +D+    D++L+QLCSG+DENA+G CA+LVFAPID SF+DDA ++PSGFRIIPLD
Sbjct: 547 NAFPPDDVAWACDMYLMQLCSGIDENAIGACAQLVFAPIDESFADDALLLPSGFRIIPLD 606

Query: 608 SGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVAS 667
              D  +  RTLDLAS LE G    +++G+S +   + +SV+TIAFQF FE HL++NVA 
Sbjct: 607 PKTDGLASTRTLDLASTLETGSGNARSAGESDSNNYNLRSVLTIAFQFTFENHLRDNVAV 666

Query: 668 MARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR---CVFYF 724
           MARQYVR ++ SVQRVA+A++PSR  +  G +  PG PEA TLARWIC+SYR   C   F
Sbjct: 667 MARQYVRNVVRSVQRVAMAIAPSRLSTQLGPKSFPGPPEALTLARWICRSYRLHTCTELF 726

Query: 725 LFDASSA 731
             +++S 
Sbjct: 727 SVESTSG 733


>gi|56202112|dbj|BAD73204.1| putative homeobox leucine-zipper protein [Oryza sativa Japonica
           Group]
          Length = 886

 Score =  967 bits (2501), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/758 (65%), Positives = 590/758 (77%), Gaps = 60/758 (7%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN----------------TF 125
           EKQRKE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVY++                  
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 126 FRQQTQNAATLAT-TDTSCESVVTSGQHHLTPQQQH-QHPPRDASPAGLLSIAEETLTEF 183
            +        LAT TDTSCESVVTSG HH   Q    Q PPRDASPAGL+SIAEETLTEF
Sbjct: 121 PQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLTEF 180

Query: 184 LSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPS 243
           LSKATGTAVEW+QMPGMKPGPDSIGI+AISHGC GVAARACGLVG++P +VAEILKDRP 
Sbjct: 181 LSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPL 240

Query: 244 WYRDCRSVEVVNVLPTGSSGTIELLYMQ-------------------------LYAPTTL 278
           W RDCRS++VVNVLP G++GTIELLYMQ                         LYAPTTL
Sbjct: 241 WLRDCRSMDVVNVLPAGANGTIELLYMQARTHKPENSEPEPEILKLKFVFDLQLYAPTTL 300

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
           APARDFWLLRYTS+L+DGSLVVCERSL++ Q GPSMP    F+R EMLPSG+LIRP + G
Sbjct: 301 APARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDVG 360

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGR 398
           GS+IHIVDHMDLEPWSVPEV+RPLYESS ++AQK +MAALR+LRQ++ E ++  +TGWGR
Sbjct: 361 GSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGR 420

Query: 399 RPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNG 458
           +PAALRALSQ+L+RGFNEALNG  D+GWS++ESDG+DDV + VNS  SK++G   ++ +G
Sbjct: 421 QPAALRALSQKLTRGFNEALNGLADDGWSVIESDGVDDVCISVNS--SKVIGCNATFSSG 478

Query: 459 FPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPR 518
            P +S  VLCAKASMLLQDV P  LL+FLREHRS+WADS++DA+ A+ +K   C+LP+ R
Sbjct: 479 LPIVSTGVLCAKASMLLQDVSPPSLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSR 538

Query: 519 AGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNC 578
            G F GQVILPLAHT E EEFLEVIKL N ++Y +D ++  D+FLLQ+ +GV+E++ G C
Sbjct: 539 LGGFSGQVILPLAHTFEPEEFLEVIKLGNASNY-QDTLVHRDLFLLQMYNGVEESSAGTC 597

Query: 579 AELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNK----- 633
           +EL+FAPIDASFSDD+P++PSGFRIIP+DS  DT SPN TLDLAS LE     ++     
Sbjct: 598 SELIFAPIDASFSDDSPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVN 657

Query: 634 ---ASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPS 690
                  ++    S+K+V+TIAFQFAF+ HLQ++VA+MARQY+R II+SVQR+A+ALS S
Sbjct: 658 GGGGGCAAAAASSSSKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSS 717

Query: 691 RF----GSNAGLRPPPGSPEAHTLARWICQSYRCVFYF 724
           R        A  +  P +PEA TL RWICQSYR  F+F
Sbjct: 718 RLVPPGAGAAAAQLSPVTPEAATLPRWICQSYR--FHF 753


>gi|449488526|ref|XP_004158070.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Cucumis
           sativus]
          Length = 844

 Score =  967 bits (2500), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/712 (67%), Positives = 578/712 (81%), Gaps = 14/712 (1%)

Query: 13  RDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 72
           RDS  ++M  D  KYVRYTPEQV+ALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIK
Sbjct: 7   RDSLNKQM--DTSKYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIK 64

Query: 73  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
           VWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQ QVS+LVYEN + RQQ   
Sbjct: 65  VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQTQVSRLVYENGYMRQQLHT 124

Query: 133 AATLATTDTSCESVVTSGQHHLTPQQQH--QHPPRDAS-PAGLLSIAEETLTEFLSKATG 189
           A+   TTD SCESVV SGQ H   QQQ+  +H  +DA+ PAGLL+IAEETL EFLSKATG
Sbjct: 125 ASG-TTTDNSCESVVMSGQQH---QQQNPTKHTQKDANNPAGLLAIAEETLAEFLSKATG 180

Query: 190 TAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCR 249
           TAV+WVQM GMKPGPDSIGIVA+S  C GVAARACGLV L+P +VAEILKDR SW+RDCR
Sbjct: 181 TAVDWVQMIGMKPGPDSIGIVAVSRNCNGVAARACGLVSLEPMKVAEILKDRLSWFRDCR 240

Query: 250 SVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQ 309
            V+V++V+ TG+ GTIELLYMQ YAPTTLA ARDFW LRYT+ LEDGSLV+CERSL  + 
Sbjct: 241 CVDVLSVISTGNGGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTLST 300

Query: 310 NGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLI 369
            GPS P    FVRAEMLPSGYLIR CE GGS+IHIVDH+DL+ WSVPEVLRPLYES+ ++
Sbjct: 301 GGPSGPPPSSFVRAEMLPSGYLIRACE-GGSLIHIVDHVDLDVWSVPEVLRPLYESTKIL 359

Query: 370 AQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSML 429
           AQ+TT+AALR++RQI+QE S     G GR+PA LR  SQRL RGFN+A+NGF D+GWS++
Sbjct: 360 AQRTTVAALRYVRQIAQEASGEVQLGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLM 419

Query: 430 ESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE 489
           +SDG++DVTV +NSSP+K +G Q +  + +P+    VLCAKASMLLQ+VPPA+L+RFLRE
Sbjct: 420 DSDGVEDVTVVINSSPNKFLGSQYN-TSLYPTF-GGVLCAKASMLLQNVPPALLVRFLRE 477

Query: 490 HRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENM 548
           HRSEWAD  +DAYSAA +KA   ++P  R G F GGQVILPLAHT+E+EEFLEV++LE  
Sbjct: 478 HRSEWADYGVDAYSAACLKASAYAVPCARPGGFPGGQVILPLAHTVENEEFLEVVRLEGH 537

Query: 549 AHYREDMIMPS-DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
           A + E+  +   D++LLQLCSGVDEN VG CA+LVFAPID SF+DDAP++PSGFR+IPL+
Sbjct: 538 AMFPEEAALGGRDMYLLQLCSGVDENTVGACAQLVFAPIDESFADDAPLLPSGFRVIPLE 597

Query: 608 SGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVAS 667
           S  + P   RTLDLAS LEV P  N+   ++     + +SV+TIAFQF FE H++++VA+
Sbjct: 598 SKAEMPGATRTLDLASTLEVRPGTNRPGCETDVTNYNLRSVLTIAFQFTFENHMRDSVAA 657

Query: 668 MARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           MARQYVR ++ SVQRVA+A++PS+ GS  G +  P SPEA TLA+WI +SYR
Sbjct: 658 MARQYVRTVVGSVQRVAMAIAPSQLGSQIGPKSLPASPEALTLAQWITRSYR 709


>gi|449435534|ref|XP_004135550.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Cucumis
           sativus]
          Length = 844

 Score =  967 bits (2499), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/712 (67%), Positives = 579/712 (81%), Gaps = 14/712 (1%)

Query: 13  RDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 72
           RDS  ++M  D  KYVRYTPEQV+ALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIK
Sbjct: 7   RDSLNKQM--DTSKYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIK 64

Query: 73  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
           VWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQ QVS+LVYEN + RQQ   
Sbjct: 65  VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQTQVSRLVYENGYMRQQLHT 124

Query: 133 AATLATTDTSCESVVTSGQHHLTPQQQH--QHPPRDAS-PAGLLSIAEETLTEFLSKATG 189
           A+   TTD SCESVV SGQ H   QQQ+  +H  +DA+ PAGLL+IAEETL EFLSKATG
Sbjct: 125 ASG-TTTDNSCESVVMSGQQH---QQQNPTKHTQKDANNPAGLLAIAEETLAEFLSKATG 180

Query: 190 TAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCR 249
           TAV+WVQM GMKPGPDSIGIVA+S  C GVAARACGLV L+P +VAEILKDR SW+RDCR
Sbjct: 181 TAVDWVQMIGMKPGPDSIGIVAVSRNCNGVAARACGLVSLEPMKVAEILKDRLSWFRDCR 240

Query: 250 SVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQ 309
            V+V++V+ TG+ GTIELLYMQ YAPTTLA ARDFW LRYT+ LEDGSLV+CERSL ++ 
Sbjct: 241 CVDVLSVISTGNGGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSST 300

Query: 310 NGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLI 369
            GPS P    FVRAEMLPSGYLIR CE GGS+IHIVDH+DL+ WSVPEVLRPLYES+ ++
Sbjct: 301 GGPSGPPPSSFVRAEMLPSGYLIRACE-GGSLIHIVDHVDLDVWSVPEVLRPLYESTKIL 359

Query: 370 AQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSML 429
           AQ+TT+AALR++RQI+QE S     G GR+PA LR  SQRL RGFN+A+NGF D+GWS++
Sbjct: 360 AQRTTVAALRYVRQIAQEASGEVQLGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLM 419

Query: 430 ESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE 489
           +SDG++DVTV +NSSP+K +G Q +  + +P+    VLCAKASMLLQ+VPPA+L+RFLRE
Sbjct: 420 DSDGVEDVTVVINSSPNKFLGSQYN-TSLYPTF-GGVLCAKASMLLQNVPPALLVRFLRE 477

Query: 490 HRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENM 548
           HRSEWAD  +DAYSAA +KA   ++P  R G F GGQVILPLAHT+E+EEFLEV++LE  
Sbjct: 478 HRSEWADYGVDAYSAACLKASAYAVPCARPGGFPGGQVILPLAHTVENEEFLEVVRLEGH 537

Query: 549 AHYREDMIMPS-DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
           A + E+  +   D++LLQLCSGVDEN VG CA+LVFAPID SF+DDAP++PSGFR+IPL+
Sbjct: 538 AMFPEEAALGGRDMYLLQLCSGVDENTVGACAQLVFAPIDESFADDAPLLPSGFRVIPLE 597

Query: 608 SGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVAS 667
           S  + P   RTLDLAS LEV P  N+   ++     + +SV+TIAFQF FE H++++VA+
Sbjct: 598 SKAEMPGATRTLDLASTLEVRPGTNRPGCETDVTNYNLRSVLTIAFQFTFENHMRDSVAA 657

Query: 668 MARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           MARQYVR ++ SVQRVA+A++PS+ GS  G +  P SPEA TLA+WI +SYR
Sbjct: 658 MARQYVRTVVGSVQRVAMAIAPSQLGSQIGPKSLPASPEALTLAQWITRSYR 709


>gi|242042549|ref|XP_002468669.1| hypothetical protein SORBIDRAFT_01g050000 [Sorghum bicolor]
 gi|241922523|gb|EER95667.1| hypothetical protein SORBIDRAFT_01g050000 [Sorghum bicolor]
          Length = 840

 Score =  964 bits (2491), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/721 (65%), Positives = 566/721 (78%), Gaps = 19/721 (2%)

Query: 2   MAVSSGGSRDSRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE 59
           MA +      S DSGG   +  MD+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RE
Sbjct: 1   MAAAVAMRGGSSDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRE 60

Query: 60  CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           CPILSNIEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQL
Sbjct: 61  CPILSNIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQL 120

Query: 120 VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEE 178
           V+EN   RQQ QN  T    DTSCES VT      TP     +P RDAS P+GLL+IAEE
Sbjct: 121 VHENAHMRQQLQN--TSLANDTSCESNVT------TPP----NPIRDASNPSGLLAIAEE 168

Query: 179 TLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEIL 238
           T TEFLSKATGTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+V EIL
Sbjct: 169 TFTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVIEIL 228

Query: 239 KDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL 298
           KDRPSW+RDCRS+EV  + P G+ GT+EL+YMQ+YAPTTL PARDFW LRYT+ +EDGSL
Sbjct: 229 KDRPSWFRDCRSLEVFTMFPAGNGGTVELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSL 288

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
           VVCERSL+ +  GP+   A  FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEV
Sbjct: 289 VVCERSLSGSGGGPNAASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEV 348

Query: 359 LRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEAL 418
           LRPLYESS ++AQK T  ALRHLRQI+QE S   V   GR+PA LR  SQRLSRGFN+A+
Sbjct: 349 LRPLYESSRVVAQKMTTVALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAI 408

Query: 419 NGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDV 478
           +GF D+GWS++  DGI+DV V  NS+             G P     ++CAKASMLLQ V
Sbjct: 409 SGFNDDGWSVMGGDGIEDVVVACNSTKKIRNNSNAGITFGAP---GGIICAKASMLLQSV 465

Query: 479 PPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHE 537
           PPA+L+RFLREHRSEWAD ++DAY A+++K   CSLP  R   F GGQ+I+PLAHT+E+E
Sbjct: 466 PPAVLVRFLREHRSEWADYNMDAYLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENE 525

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPII 597
           E LEV++LE      ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F DDAP+I
Sbjct: 526 EILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLI 585

Query: 598 PSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAF 657
            SGFR+IPLD   D  +  RTLDLAS+L+VG    +ASGD+S    + +SV+TIAFQF +
Sbjct: 586 SSGFRVIPLDMKTDGVASGRTLDLASSLDVGSAAPQASGDASPDDCNLRSVLTIAFQFPY 645

Query: 658 EMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQS 717
           EMHLQ++VA+MARQYVRG++++VQRV++A+SPS+ G NAG R   G PEA TLARW+CQS
Sbjct: 646 EMHLQDSVATMARQYVRGVVSAVQRVSMAISPSQSGLNAGQRMLSGFPEAATLARWVCQS 705

Query: 718 Y 718
           Y
Sbjct: 706 Y 706


>gi|226531570|ref|NP_001146215.1| uncharacterized protein LOC100279785 [Zea mays]
 gi|219886211|gb|ACL53480.1| unknown [Zea mays]
 gi|414868944|tpg|DAA47501.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 854

 Score =  964 bits (2491), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/706 (66%), Positives = 580/706 (82%), Gaps = 12/706 (1%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           +D GKYVRYT EQV+ALE  Y ECPKPSS+RRQQLIR+C +L+N+EP+QIKVWFQNRRCR
Sbjct: 19  LDAGKYVRYTAEQVDALELAYGECPKPSSLRRQQLIRDCAVLTNVEPRQIKVWFQNRRCR 78

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQR+E+SRLQ VNRKL AMNKLLMEENDRLQKQVS+LV++N + + +  ++ ++ATTDT
Sbjct: 79  EKQRRESSRLQTVNRKLGAMNKLLMEENDRLQKQVSRLVFDNGYMKNRL-HSPSVATTDT 137

Query: 142 SCESVVTSGQHHLTPQQQHQ---HPP-RDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQ 196
           SCESVVTSGQH    QQQ+    HPP RDA+ PAGLL+IAEETL EF+SKATGTAV WVQ
Sbjct: 138 SCESVVTSGQHK---QQQNPAVLHPPQRDANNPAGLLAIAEETLAEFMSKATGTAVNWVQ 194

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           M GMKPGPDS+GI+A+SH C+GVAARACGLV L+PT+VAEILKDR SWYRDCR V++++V
Sbjct: 195 MVGMKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRASWYRDCRRVDILHV 254

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           +PTG+ GTIEL+YMQ YA TTLA  RDFW LRYTS L+DGSLV+CERSL ++  GPS P+
Sbjct: 255 IPTGNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTHSTGGPSGPK 314

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
            P F+RAE+LPSGYLIRPC+GGGS+I+IVDH+DL   SVPEVLRPLYES  ++AQK T A
Sbjct: 315 TPDFIRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNACSVPEVLRPLYESPKILAQKMTAA 374

Query: 377 ALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW-SMLESDGID 435
           ALRH+RQI+ E S  +  G GR+PA LR  SQRLSRGFN+A++GF D+GW S+L SDG +
Sbjct: 375 ALRHIRQIAHESSGETPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSSLLSSDGAE 434

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWA 495
           D+++ +NSSP+K++G  +S    F +M   ++CAKASMLLQ+VPPA+L+RFLREHRSEWA
Sbjct: 435 DISITINSSPNKLIGSDVSPSPFFSAMGGGIMCAKASMLLQNVPPALLVRFLREHRSEWA 494

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           D  +DAYSAA+++A P ++P  RAG F G QVILPLA T+EHEE LEVI+L+      ++
Sbjct: 495 DPGVDAYSAASLRANPYNVPGLRAGGFMGNQVILPLARTVEHEECLEVIRLQGHGFSHDE 554

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPS 614
           ++M  D+FLLQLCSG+DE+A G CA+LVFAPID SF+DDAP++PSGFR+IPLD+  D PS
Sbjct: 555 VLMSPDMFLLQLCSGIDEDAPGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDVPS 614

Query: 615 PNRTLDLASALEVGPTGNK-ASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYV 673
             RTLDLASALEVG  G   A  DS +   ST+SV+TIAFQF+FE HL+E+VA+MARQYV
Sbjct: 615 ATRTLDLASALEVGSGGGLCALSDSGSGTRSTRSVLTIAFQFSFENHLRESVAAMARQYV 674

Query: 674 RGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           R ++A VQRVA+A+SPSR G +  L+ PPGSPEA  LA WI +SYR
Sbjct: 675 RAVMAIVQRVAMAISPSRLGPHVELKHPPGSPEALALASWIGRSYR 720


>gi|383212091|dbj|BAM08932.1| class III homeobox-leucine zipper protein [Asparagus asparagoides]
          Length = 839

 Score =  962 bits (2488), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/722 (66%), Positives = 574/722 (79%), Gaps = 18/722 (2%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDN-GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           MA +      S  SGG +  MD+ GKYVRYT EQVEALE++Y  CPKPSSMRRQQLIRE 
Sbjct: 1   MAAAVAIRTSSGSSGGLEKHMDSTGKYVRYTAEQVEALEKVYAVCPKPSSMRRQQLIREN 60

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           PILSNIEPKQIKVWFQNRRCREKQRKE+SRLQAVNRKLTA+NKLLMEEN+RLQKQV+QLV
Sbjct: 61  PILSNIEPKQIKVWFQNRRCREKQRKESSRLQAVNRKLTALNKLLMEENERLQKQVAQLV 120

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEET 179
           +ENT+ +QQ QN +     DTSCESVVT      TPQ    +P RDAS PAGLLS+AEET
Sbjct: 121 HENTYMKQQLQNVSL--GNDTSCESVVT------TPQ----NPLRDASNPAGLLSVAEET 168

Query: 180 LTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILK 239
           LTEFLSKATGTAV+WVQMPGMKPGPDSIGIVAIS  C+GVAARACGLV L+PT+VAEILK
Sbjct: 169 LTEFLSKATGTAVDWVQMPGMKPGPDSIGIVAISQTCSGVAARACGLVSLEPTKVAEILK 228

Query: 240 DRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLV 299
           DRPSW+RDCRS+EV  + P G+ GTIEL+YMQ+YAPTTLAPARD W LRYT+ LEDGSLV
Sbjct: 229 DRPSWFRDCRSLEVFTMFPAGNGGTIELVYMQMYAPTTLAPARDLWTLRYTTNLEDGSLV 288

Query: 300 VCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL 359
           VCERSL  +  GPS   A  F RAEM PSG+LIRPC+GGGSI+HIVDH++LEPWSVPEVL
Sbjct: 289 VCERSLRGSGGGPSAASAHQFARAEMFPSGFLIRPCDGGGSIVHIVDHLNLEPWSVPEVL 348

Query: 360 RPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALN 419
           RPLYESS ++AQK T AALRH+RQI+QE+S   V   GR+PA LR  SQ+LSRGFN+A+N
Sbjct: 349 RPLYESSRVLAQKMTAAALRHIRQIAQEMSGEMVYPLGRQPAVLRTFSQKLSRGFNDAIN 408

Query: 420 GFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
            F D+GWS++  DG++DV V  NS   K      + VN   ++ + V+CAKASMLLQ+VP
Sbjct: 409 SFVDDGWSVMGCDGVEDVVVTTNS--MKKTNSDANPVNAV-TVPDGVVCAKASMLLQNVP 465

Query: 480 PAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEE 538
           PA+L+RFLREHRSEWAD +IDAYSA+++KAG    P  R+  F G Q I+ LAHT+E+EE
Sbjct: 466 PALLVRFLREHRSEWADYNIDAYSASSLKAGSAFFPGLRSTRFSGSQTIMHLAHTVENEE 525

Query: 539 FLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIP 598
            LEV++LE  A  +++ I+  DI LLQLCSG+DENA G+C +LVFAPID  F DDAP++P
Sbjct: 526 LLEVVRLEGQALTQDEAILSRDIHLLQLCSGIDENAAGSCVQLVFAPIDELFPDDAPLLP 585

Query: 599 SGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFE 658
           SGFR+IPLD   D  + NRTLDLAS+LEVG   N+  G+++    S +SV+TIAFQF +E
Sbjct: 586 SGFRVIPLDCRPDGLNSNRTLDLASSLEVGSAVNRTGGEAAPSDYSLRSVLTIAFQFPYE 645

Query: 659 MHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
            HLQE+VA+MARQYVR I+++VQRV++AL+PS+ G ++  +   GSPEA TLARWICQSY
Sbjct: 646 FHLQESVAAMARQYVRNIVSAVQRVSMALAPSQLGLSSSDKLLAGSPEAVTLARWICQSY 705

Query: 719 RC 720
            C
Sbjct: 706 NC 707


>gi|414864313|tpg|DAA42870.1| TPA: putative homeobox/lipid-binding domain family protein isoform
           1 [Zea mays]
 gi|414864314|tpg|DAA42871.1| TPA: putative homeobox/lipid-binding domain family protein isoform
           2 [Zea mays]
          Length = 840

 Score =  961 bits (2483), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/724 (65%), Positives = 562/724 (77%), Gaps = 25/724 (3%)

Query: 2   MAVSSGGSRDSRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE 59
           MA +      S DSGG   +  MD+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RE
Sbjct: 1   MAAAVAMRGGSSDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRE 60

Query: 60  CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           CPILSNIEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQL
Sbjct: 61  CPILSNIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQL 120

Query: 120 VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPP---RDAS-PAGLLSI 175
           V+EN   RQQ QN  T    DTSCES VT+             PP   RDAS P+GLL+I
Sbjct: 121 VHENAHMRQQLQN--TSLANDTSCESNVTA-------------PPNAIRDASNPSGLLAI 165

Query: 176 AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVA 235
           AEET TEFLSKATGTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+V 
Sbjct: 166 AEETFTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVI 225

Query: 236 EILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLED 295
           EILKDRPSW+RDCRS+EV  + P G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ +ED
Sbjct: 226 EILKDRPSWFRDCRSLEVFTMFPAGNGGTIELIYMQMYAPTTLVPARDFWTLRYTTTMED 285

Query: 296 GSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 355
           GSLVVCERSL  +  GP+   A  FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSV
Sbjct: 286 GSLVVCERSLTGSGGGPNAASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSV 345

Query: 356 PEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFN 415
           PEVLRPLYESS ++AQK T  ALRHLRQI+QE S   V   GR+PA LR  SQRLSRGFN
Sbjct: 346 PEVLRPLYESSRVVAQKMTTVALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFN 405

Query: 416 EALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLL 475
           +A++GF D+GWS++  DGI+DV V  NS+             G P     ++CAKASMLL
Sbjct: 406 DAISGFNDDGWSVMGGDGIEDVVVACNSTKKIRNNSNAGITFGAP---GGIICAKASMLL 462

Query: 476 QDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTI 534
           Q VPPA+L+RFLREHRSEWAD +IDAY A+++K   CSLP  R   F GGQ+I+PLAHT+
Sbjct: 463 QSVPPAVLVRFLREHRSEWADYNIDAYLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTV 522

Query: 535 EHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDA 594
           E+EE LEV++LE      ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F DDA
Sbjct: 523 ENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDA 582

Query: 595 PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQ 654
           P+I SGFR+IPLD   D  S  RTLDLAS+L+VG    +ASGD+     + +SV+TIAFQ
Sbjct: 583 PLISSGFRVIPLDMKTDGVSSGRTLDLASSLDVGSAAPQASGDAPPDDCNLRSVLTIAFQ 642

Query: 655 FAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWI 714
           F +EMHLQ++VA+MARQYVR ++++VQRV++A+SPS+ G NAG R   G PEA TLARW+
Sbjct: 643 FPYEMHLQDSVATMARQYVRSVVSAVQRVSMAISPSQSGLNAGQRMLSGFPEAATLARWV 702

Query: 715 CQSY 718
           CQSY
Sbjct: 703 CQSY 706


>gi|162459714|ref|NP_001105994.1| rolled leaf 2 [Zea mays]
 gi|82754245|gb|ABB89930.1| rolled leaf 2 [Zea mays]
          Length = 840

 Score =  959 bits (2478), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/724 (65%), Positives = 562/724 (77%), Gaps = 25/724 (3%)

Query: 2   MAVSSGGSRDSRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE 59
           MA +      S DSGG   +  MD+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RE
Sbjct: 1   MAAAVAMRGGSSDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRE 60

Query: 60  CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           CPILSNIEPKQIKVWFQNRRCR+KQRKE+SRLQAVNR+LTAMNKLLMEEN+RLQKQVSQL
Sbjct: 61  CPILSNIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRRLTAMNKLLMEENERLQKQVSQL 120

Query: 120 VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPP---RDAS-PAGLLSI 175
           V+EN   RQQ QN  T    DTSCES VT+             PP   RDAS P+GLL+I
Sbjct: 121 VHENAHMRQQLQN--TSLANDTSCESNVTA-------------PPNAIRDASNPSGLLAI 165

Query: 176 AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVA 235
           AEET TEFLSKATGTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+V 
Sbjct: 166 AEETFTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVI 225

Query: 236 EILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLED 295
           EILKDRPSW+RDCRS+EV  + P G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ +ED
Sbjct: 226 EILKDRPSWFRDCRSLEVFTMFPAGNGGTIELIYMQMYAPTTLVPARDFWTLRYTTTMED 285

Query: 296 GSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 355
           GSLVVCERSL  +  GP+   A  FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSV
Sbjct: 286 GSLVVCERSLTGSGGGPNAASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSV 345

Query: 356 PEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFN 415
           PEVLRPLYESS ++AQK T  ALRHLRQI+QE S   V   GR+PA LR  SQRLSRGFN
Sbjct: 346 PEVLRPLYESSRVVAQKMTTVALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFN 405

Query: 416 EALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLL 475
           +A++GF D+GWS++  DGI+DV V  NS+             G P     ++CAKASMLL
Sbjct: 406 DAISGFNDDGWSVMGGDGIEDVVVACNSTKKIRNNSNAGITFGAP---GGIICAKASMLL 462

Query: 476 QDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTI 534
           Q VPPA+L+RFLREHRSEWAD +IDAY A+++K   CSLP  R   F GGQ+I+PLAHT+
Sbjct: 463 QSVPPAVLVRFLREHRSEWADYNIDAYLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTV 522

Query: 535 EHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDA 594
           E+EE LEV++LE      ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F DDA
Sbjct: 523 ENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDA 582

Query: 595 PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQ 654
           P+I SGFR+IPLD   D  S  RTLDLAS+L+VG    +ASGD+     + +SV+TIAFQ
Sbjct: 583 PLISSGFRVIPLDMKTDGVSSGRTLDLASSLDVGSAAPQASGDAPPDDCNLRSVLTIAFQ 642

Query: 655 FAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWI 714
           F +EMHLQ++VA+MARQYVR ++++VQRV++A+SPS+ G NAG R   G PEA TLARW+
Sbjct: 643 FPYEMHLQDSVATMARQYVRSVVSAVQRVSMAISPSQSGLNAGQRMLSGFPEAATLARWV 702

Query: 715 CQSY 718
           CQSY
Sbjct: 703 CQSY 706


>gi|414864315|tpg|DAA42872.1| TPA: putative homeobox/lipid-binding domain family protein, partial
           [Zea mays]
          Length = 917

 Score =  958 bits (2477), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/724 (65%), Positives = 562/724 (77%), Gaps = 25/724 (3%)

Query: 2   MAVSSGGSRDSRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE 59
           MA +      S DSGG   +  MD+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RE
Sbjct: 1   MAAAVAMRGGSSDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRE 60

Query: 60  CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           CPILSNIEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQL
Sbjct: 61  CPILSNIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQL 120

Query: 120 VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPP---RDAS-PAGLLSI 175
           V+EN   RQQ QN  T    DTSCES VT+             PP   RDAS P+GLL+I
Sbjct: 121 VHENAHMRQQLQN--TSLANDTSCESNVTA-------------PPNAIRDASNPSGLLAI 165

Query: 176 AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVA 235
           AEET TEFLSKATGTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+V 
Sbjct: 166 AEETFTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVI 225

Query: 236 EILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLED 295
           EILKDRPSW+RDCRS+EV  + P G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ +ED
Sbjct: 226 EILKDRPSWFRDCRSLEVFTMFPAGNGGTIELIYMQMYAPTTLVPARDFWTLRYTTTMED 285

Query: 296 GSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 355
           GSLVVCERSL  +  GP+   A  FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSV
Sbjct: 286 GSLVVCERSLTGSGGGPNAASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSV 345

Query: 356 PEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFN 415
           PEVLRPLYESS ++AQK T  ALRHLRQI+QE S   V   GR+PA LR  SQRLSRGFN
Sbjct: 346 PEVLRPLYESSRVVAQKMTTVALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFN 405

Query: 416 EALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLL 475
           +A++GF D+GWS++  DGI+DV V  NS+             G P     ++CAKASMLL
Sbjct: 406 DAISGFNDDGWSVMGGDGIEDVVVACNSTKKIRNNSNAGITFGAP---GGIICAKASMLL 462

Query: 476 QDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTI 534
           Q VPPA+L+RFLREHRSEWAD +IDAY A+++K   CSLP  R   F GGQ+I+PLAHT+
Sbjct: 463 QSVPPAVLVRFLREHRSEWADYNIDAYLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTV 522

Query: 535 EHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDA 594
           E+EE LEV++LE      ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F DDA
Sbjct: 523 ENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDA 582

Query: 595 PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQ 654
           P+I SGFR+IPLD   D  S  RTLDLAS+L+VG    +ASGD+     + +SV+TIAFQ
Sbjct: 583 PLISSGFRVIPLDMKTDGVSSGRTLDLASSLDVGSAAPQASGDAPPDDCNLRSVLTIAFQ 642

Query: 655 FAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWI 714
           F +EMHLQ++VA+MARQYVR ++++VQRV++A+SPS+ G NAG R   G PEA TLARW+
Sbjct: 643 FPYEMHLQDSVATMARQYVRSVVSAVQRVSMAISPSQSGLNAGQRMLSGFPEAATLARWV 702

Query: 715 CQSY 718
           CQSY
Sbjct: 703 CQSY 706


>gi|18076736|emb|CAC84906.1| HD-Zip protein [Zinnia violacea]
          Length = 835

 Score =  957 bits (2475), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/712 (66%), Positives = 562/712 (78%), Gaps = 32/712 (4%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K  +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 9   KHQLDNGKYVRYTTEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 68

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKE+SRLQ VN+KL+AMNKLLMEENDRLQKQVSQLV EN + RQQ    +  A 
Sbjct: 69  RCREKQRKESSRLQTVNKKLSAMNKLLMEENDRLQKQVSQLVCENGYMRQQMHTGS--AA 126

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQM 197
           TD SCESVV + QH L          RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQM
Sbjct: 127 TDASCESVVNTPQHSL----------RDATNPAGLLSIAEETLAEFLSKATGTAVDWVQM 176

Query: 198 PGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVL 257
           PGMKPGPDS+GI AIS  C+GVAARACGLV L+PT++ EILKDRPSW+RDCRS+EV  + 
Sbjct: 177 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIVEILKDRPSWFRDCRSLEVFTMF 236

Query: 258 PTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQA 317
           P G+ GTIEL+YMQ +APTTLAPARDFW LRYT+ L++GSLVVCERSL+ +  GP+    
Sbjct: 237 PAGNGGTIELVYMQTFAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNPAAV 296

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
             FVR EMLPSGYLIRPCEGGGS+IHIVDH++LE WSVPEVLRPLYESS ++AQK T+AA
Sbjct: 297 AQFVRGEMLPSGYLIRPCEGGGSVIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAA 356

Query: 378 LRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           LR++RQI+QE S   V G GR+PA LR LSQRLSRGFN+A+NGF+D+GWS++  DG++DV
Sbjct: 357 LRYIRQIAQESSGEVVYGLGRQPAVLRTLSQRLSRGFNDAINGFSDDGWSLMNCDGVEDV 416

Query: 438 TVHVNSSPSKMMGVQ----LSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSE 493
            + VNS+ +    +     +SY+ G       +LCAKASML QDVPPA+L+RFLREHRSE
Sbjct: 417 IIAVNSTKNLNNSMNPSNSISYLGG-------ILCAKASMLFQDVPPAVLVRFLREHRSE 469

Query: 494 WADSSIDAYSAAAVKAGPC-SLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHY 551
           WAD ++DAYSAA+VKA  C + P  R   F G Q+I+PL HTIEHEE LEV++LE  A  
Sbjct: 470 WADFNVDAYSAASVKANSCNTYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHALG 529

Query: 552 REDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD---- 607
           +ED     DI LLQLC+G+DENAVG C+ELVFAPID  F DDAP++PSGFRIIPLD    
Sbjct: 530 QEDPFTSRDIHLLQLCNGIDENAVGACSELVFAPIDEMFPDDAPLVPSGFRIIPLDPKSG 589

Query: 608 SGKDT-PSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVA 666
            GK+   + +RTLDL S+L+V P  N  S D ST C +++SV+TIAFQF FE +L E+VA
Sbjct: 590 GGKNALVTTHRTLDLTSSLDVTPANNHGSTDLST-CQTSRSVLTIAFQFPFENNLAESVA 648

Query: 667 SMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           +MARQYVR +I SVQRVA+A+SPS      G +P P SPEA TLA+WICQSY
Sbjct: 649 TMARQYVRSVINSVQRVAMAISPSGLSPCVGPKPSPTSPEAVTLAQWICQSY 700


>gi|162462024|ref|NP_001105533.1| rolled leaf1 [Zea mays]
 gi|40950648|gb|AAR97952.1| rolled leaf1 [Zea mays]
          Length = 840

 Score =  956 bits (2470), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/711 (66%), Positives = 558/711 (78%), Gaps = 19/711 (2%)

Query: 12  SRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           S DSGG   +  MD+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPK
Sbjct: 11  SSDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPK 70

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN   RQQ
Sbjct: 71  QIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQ 130

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKAT 188
            QN  T    DTSCES VT      TP     +P RDAS P+GLL+IAEET TEFLSKAT
Sbjct: 131 LQN--TSLANDTSCESNVT------TPP----NPIRDASNPSGLLAIAEETFTEFLSKAT 178

Query: 189 GTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDC 248
           GTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+  EILKDRPSW+RDC
Sbjct: 179 GTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDC 238

Query: 249 RSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           RS+EV    P G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ +
Sbjct: 239 RSLEVFTRFPAGNGGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGS 298

Query: 309 QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL 368
             GP+      FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS +
Sbjct: 299 GGGPNAASTQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV 358

Query: 369 IAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
           +AQK T  ALRHLRQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS+
Sbjct: 359 VAQKMTTVALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSV 418

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           +  DGI+DV +  NS+             G P     ++CAKASMLLQ VPPA+L+RFLR
Sbjct: 419 MGGDGIEDVVIACNSTKKIRNTSNAGITFGAP---GGIICAKASMLLQSVPPAVLVRFLR 475

Query: 489 EHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFG-GQVILPLAHTIEHEEFLEVIKLEN 547
           EHRSEWAD +IDAY A+++K   CSLP  R   F  GQ+I+PLAHT+E+EE LEV++LE 
Sbjct: 476 EHRSEWADYNIDAYLASSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRLEG 535

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
                ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F DDAP+I SGFR+IPLD
Sbjct: 536 QPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLD 595

Query: 608 SGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVAS 667
              D  S  RTLDLAS+L+VG    +ASGD+S    S +SV+TIAFQF +EMHLQ++VA+
Sbjct: 596 VKTDGVSSGRTLDLASSLDVGSAAPQASGDASPDDCSLRSVLTIAFQFPYEMHLQDSVAA 655

Query: 668 MARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           MARQYVR +I++VQRV++A+SPS+ G NAG R   G PEA TLARW+CQSY
Sbjct: 656 MARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSY 706


>gi|413957205|gb|AFW89854.1| rolled leaf1 [Zea mays]
          Length = 709

 Score =  955 bits (2469), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/712 (66%), Positives = 559/712 (78%), Gaps = 20/712 (2%)

Query: 12  SRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           S DSGG   +  MD+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPK
Sbjct: 14  SSDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPK 73

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN   RQQ
Sbjct: 74  QIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQ 133

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKAT 188
            QN  T    DTSCES VT      TP     +P RDAS P+GLL+IAEET TEFLSKAT
Sbjct: 134 LQN--TSLANDTSCESNVT------TPP----NPIRDASNPSGLLAIAEETFTEFLSKAT 181

Query: 189 GTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDC 248
           GTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+  EILKDRPSW+RDC
Sbjct: 182 GTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDC 241

Query: 249 RSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           RS+EV    P G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ +
Sbjct: 242 RSLEVFTRFPAGNGGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGS 301

Query: 309 QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL 368
             GP+      FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS +
Sbjct: 302 GGGPNAASTQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV 361

Query: 369 IAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
           +AQK T  ALRHLRQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS+
Sbjct: 362 VAQKMTTVALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSV 421

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           +  DGI+DV +  NS+             G P     ++CAKASMLLQ VPPA+L+RFLR
Sbjct: 422 MGGDGIEDVVIACNSTKKIRNTSNAGITFGAP---GGIICAKASMLLQSVPPAVLVRFLR 478

Query: 489 EHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFG-GQVILPLAHTIEHEEFLEVIKLEN 547
           EHRSEWAD +IDAY A+++K   CSLP  R   F  GQ+I+PLAHT+E+EE LEV++LE 
Sbjct: 479 EHRSEWADYNIDAYLASSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRLEG 538

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
                ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F DDAP+I SGFR+IPLD
Sbjct: 539 QPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLD 598

Query: 608 SGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVAS 667
              D  S  RTLDLAS+L+VG    +ASG+S   C S +SV+TIAFQF +EMHLQ++VA+
Sbjct: 599 VKTDGVSSGRTLDLASSLDVGSAAPQASGESPDDC-SLRSVLTIAFQFPYEMHLQDSVAA 657

Query: 668 MARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           MARQYVR +I++VQRV++A+SPS+ G NAG R   G PEA TLARW+CQSY+
Sbjct: 658 MARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYQ 709


>gi|413957206|gb|AFW89855.1| rolled leaf1 [Zea mays]
          Length = 713

 Score =  955 bits (2468), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/712 (66%), Positives = 559/712 (78%), Gaps = 20/712 (2%)

Query: 12  SRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           S DSGG   +  MD+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPK
Sbjct: 14  SSDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPK 73

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN   RQQ
Sbjct: 74  QIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQ 133

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKAT 188
            QN  T    DTSCES VT      TP     +P RDAS P+GLL+IAEET TEFLSKAT
Sbjct: 134 LQN--TSLANDTSCESNVT------TPP----NPIRDASNPSGLLAIAEETFTEFLSKAT 181

Query: 189 GTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDC 248
           GTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+  EILKDRPSW+RDC
Sbjct: 182 GTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDC 241

Query: 249 RSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           RS+EV    P G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ +
Sbjct: 242 RSLEVFTRFPAGNGGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGS 301

Query: 309 QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL 368
             GP+      FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS +
Sbjct: 302 GGGPNAASTQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV 361

Query: 369 IAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
           +AQK T  ALRHLRQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS+
Sbjct: 362 VAQKMTTVALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSV 421

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           +  DGI+DV +  NS+             G P     ++CAKASMLLQ VPPA+L+RFLR
Sbjct: 422 MGGDGIEDVVIACNSTKKIRNTSNAGITFGAP---GGIICAKASMLLQSVPPAVLVRFLR 478

Query: 489 EHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFG-GQVILPLAHTIEHEEFLEVIKLEN 547
           EHRSEWAD +IDAY A+++K   CSLP  R   F  GQ+I+PLAHT+E+EE LEV++LE 
Sbjct: 479 EHRSEWADYNIDAYLASSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRLEG 538

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
                ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F DDAP+I SGFR+IPLD
Sbjct: 539 QPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLD 598

Query: 608 SGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVAS 667
              D  S  RTLDLAS+L+VG    +ASG+S   C S +SV+TIAFQF +EMHLQ++VA+
Sbjct: 599 VKTDGVSSGRTLDLASSLDVGSAAPQASGESPDDC-SLRSVLTIAFQFPYEMHLQDSVAA 657

Query: 668 MARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           MARQYVR +I++VQRV++A+SPS+ G NAG R   G PEA TLARW+CQSY+
Sbjct: 658 MARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYQ 709


>gi|223975951|gb|ACN32163.1| unknown [Zea mays]
 gi|413957207|gb|AFW89856.1| rolled leaf1 isoform 1 [Zea mays]
 gi|413957208|gb|AFW89857.1| rolled leaf1 isoform 2 [Zea mays]
          Length = 842

 Score =  954 bits (2466), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/711 (66%), Positives = 558/711 (78%), Gaps = 20/711 (2%)

Query: 12  SRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           S DSGG   +  MD+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPK
Sbjct: 14  SSDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPK 73

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN   RQQ
Sbjct: 74  QIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQ 133

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKAT 188
            QN  T    DTSCES VT      TP     +P RDAS P+GLL+IAEET TEFLSKAT
Sbjct: 134 LQN--TSLANDTSCESNVT------TPP----NPIRDASNPSGLLAIAEETFTEFLSKAT 181

Query: 189 GTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDC 248
           GTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+  EILKDRPSW+RDC
Sbjct: 182 GTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDC 241

Query: 249 RSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           RS+EV    P G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ +
Sbjct: 242 RSLEVFTRFPAGNGGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGS 301

Query: 309 QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL 368
             GP+      FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS +
Sbjct: 302 GGGPNAASTQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV 361

Query: 369 IAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
           +AQK T  ALRHLRQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS+
Sbjct: 362 VAQKMTTVALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSV 421

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           +  DGI+DV +  NS+             G P     ++CAKASMLLQ VPPA+L+RFLR
Sbjct: 422 MGGDGIEDVVIACNSTKKIRNTSNAGITFGAP---GGIICAKASMLLQSVPPAVLVRFLR 478

Query: 489 EHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFG-GQVILPLAHTIEHEEFLEVIKLEN 547
           EHRSEWAD +IDAY A+++K   CSLP  R   F  GQ+I+PLAHT+E+EE LEV++LE 
Sbjct: 479 EHRSEWADYNIDAYLASSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRLEG 538

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
                ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F DDAP+I SGFR+IPLD
Sbjct: 539 QPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLD 598

Query: 608 SGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVAS 667
              D  S  RTLDLAS+L+VG    +ASG+S   C S +SV+TIAFQF +EMHLQ++VA+
Sbjct: 599 VKTDGVSSGRTLDLASSLDVGSAAPQASGESPDDC-SLRSVLTIAFQFPYEMHLQDSVAA 657

Query: 668 MARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           MARQYVR +I++VQRV++A+SPS+ G NAG R   G PEA TLARW+CQSY
Sbjct: 658 MARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSY 708


>gi|147783606|emb|CAN61612.1| hypothetical protein VITISV_013992 [Vitis vinifera]
          Length = 842

 Score =  954 bits (2465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/715 (67%), Positives = 565/715 (79%), Gaps = 23/715 (3%)

Query: 10  RDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           R+S  SG     +D+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPK
Sbjct: 10  RESSSSGSINKHLDSGKYVRYTAEQVEALERVYLECPKPSSLRRQQLIRECPILSNIEPK 69

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN + RQQ
Sbjct: 70  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMRQQ 129

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKAT 188
            Q A+  ATTD SCESVVT+ QH L          RDA+ PAGLLSIAEETL EFLSKAT
Sbjct: 130 LQTASA-ATTDASCESVVTTPQHSL----------RDANNPAGLLSIAEETLAEFLSKAT 178

Query: 189 GTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDC 248
           GTAV+WVQMPGMKPGPDS+GI AISH C+G  + +         +  EILKDRPSW+RDC
Sbjct: 179 GTAVDWVQMPGMKPGPDSVGIFAISHSCSGSGSSSMRSCKFRTLK--EILKDRPSWFRDC 236

Query: 249 RSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           RS+EV  + P G+ GT+ELLY Q+YAPTTLAPARDFW LRYT+ L++GSLVVCERSL+ +
Sbjct: 237 RSLEVFTMFPAGNGGTVELLYTQIYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGS 296

Query: 309 QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL 368
             GP+   A  FVRAEMLPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLRPLYESS +
Sbjct: 297 GAGPNTAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRV 356

Query: 369 IAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
           +AQK T+AALR++RQI+QE S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS+
Sbjct: 357 VAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSL 416

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           +  DG +DV + VNS  +K +    +  N   S+   VLCAKASMLLQ+VPPA+L+RFLR
Sbjct: 417 MSCDGAEDVIIAVNS--TKNLNTTSNPANSL-SLPGGVLCAKASMLLQNVPPAVLVRFLR 473

Query: 489 EHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLEN 547
           EHRSEWAD S+DAYSAA++KA P S P  R   F G Q+I+PL HTIEHEE LEVI+LE 
Sbjct: 474 EHRSEWADFSVDAYSAASLKASPYSYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEG 533

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
            +   ED  M  DI LLQ+CSGVDENAVG C+ELVFAPID  F DDAP++PSGFRIIPLD
Sbjct: 534 HSLAHEDAFMSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLD 593

Query: 608 SG----KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQE 663
           S     ++T + +RTLDL S+LEVGP  N+A+GDSS+ C +T+SV+TIAFQF FE +LQ+
Sbjct: 594 SKSGDTQETLTTHRTLDLTSSLEVGPATNQAAGDSSS-CYNTRSVLTIAFQFPFESNLQD 652

Query: 664 NVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           NVA+MARQYVR +I+SVQRVA+A+SPS  G   G +   GSPEA TLA WICQSY
Sbjct: 653 NVATMARQYVRSVISSVQRVAMAISPSGLGPAVGPKLSAGSPEALTLAHWICQSY 707


>gi|206572103|gb|ACI13684.1| putative REV HD-ZipIII [Malus x domestica]
          Length = 845

 Score =  951 bits (2458), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/725 (65%), Positives = 568/725 (78%), Gaps = 23/725 (3%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MA++    R+S         +D GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIREC 
Sbjct: 1   MAMAVAHHRESSSGSSINKHLDAGKYVRYTSEQVEALERVYAECPKPSSLRRQQLIRECS 60

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEP+QIKVWFQNRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV 
Sbjct: 61  ILSNIEPRQIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVC 120

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETL 180
           EN + RQQ  +A+  ATTD S +SVVT+ QH L          RDA+ PAGLLS+AEETL
Sbjct: 121 ENGYMRQQLHSASA-ATTDASGDSVVTTPQHSL----------RDANNPAGLLSVAEETL 169

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
            EFLSKATGTAV+WVQMPGMKPGPDS+GI AIS  C+GVAARACGLV L+PT++AEILKD
Sbjct: 170 AEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKD 229

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSW+RDCRS+EV  + P G+ GTIEL+Y Q YAPTTLAPARDFW LRYT+ L++GS VV
Sbjct: 230 RPSWFRDCRSLEVFTMFPAGNGGTIELIYTQTYAPTTLAPARDFWTLRYTATLDNGSFVV 289

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSL+ +  GP+   A  FVR  MLPSGYLIRPCEGGGSI+HIVDH++LE WSVPEVLR
Sbjct: 290 CERSLSGSGAGPNPASASQFVRGAMLPSGYLIRPCEGGGSIVHIVDHLNLEAWSVPEVLR 349

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESS ++AQ+ T+AALR++RQI++E S   V   GR+PA LR  SQRL RGFN+A+NG
Sbjct: 350 PLYESSKVVAQRMTIAALRYIRQIAEETSGEVVYSLGRQPAVLRTFSQRLIRGFNDAVNG 409

Query: 421 FTDEGWSML--ESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDV 478
           F D+GWS++  + DG DDV + VNS  +K +    ++ N   ++   VLCAKASMLLQ+V
Sbjct: 410 FNDDGWSLVNCDGDGADDVIIAVNS--TKNLTSTSNHANSL-ALLGGVLCAKASMLLQNV 466

Query: 479 PPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHE 537
           PPA+L+RFLREHRSEWAD ++DAYSA ++KAG  + P  R   F GGQ+I+PL HTIE E
Sbjct: 467 PPAVLVRFLREHRSEWADFNVDAYSATSMKAGAYAYPGMRPTRFTGGQIIMPLGHTIEQE 526

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPII 597
           E LEV++LE  +  +ED     DI LLQ+CSGVDENAVG C+ELVFAPID  F DDAP++
Sbjct: 527 ELLEVVRLEGHSLTQEDAFASRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDAPLL 586

Query: 598 PSGFRIIPLDS----GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAF 653
           PSGFRIIPLDS     KDT + +RTLDL S+LEVG T + A+G+ +T   +T+SV+TIAF
Sbjct: 587 PSGFRIIPLDSKTGDSKDTLNTHRTLDLTSSLEVGSTTSNAAGELTT-FHNTRSVLTIAF 645

Query: 654 QFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARW 713
           QF F+  LQENVA+MARQYVR +I+SVQRVA+A+SPS    + G +  PGSPEA TLA W
Sbjct: 646 QFPFDNSLQENVANMARQYVRSVISSVQRVAMAISPSGLSPSVGPKLSPGSPEAQTLAHW 705

Query: 714 ICQSY 718
           ICQSY
Sbjct: 706 ICQSY 710


>gi|449522211|ref|XP_004168121.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Cucumis
           sativus]
          Length = 841

 Score =  951 bits (2457), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/720 (66%), Positives = 556/720 (77%), Gaps = 17/720 (2%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MA++    R+S      + +  +GKYVRYT EQVEALER+Y ECPKPSS+RRQQL+R+CP
Sbjct: 1   MAMAIAHHRESSTGSITRHLDSSGKYVRYTSEQVEALERVYAECPKPSSLRRQQLVRDCP 60

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKL AMNKLLMEENDRLQKQVSQLV 
Sbjct: 61  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSQLVC 120

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETL 180
           EN F RQQ       AT D SC+SVVT      TPQ       RDA+ PAGLLSIAEETL
Sbjct: 121 ENGFMRQQLHTVPAAATADASCDSVVT------TPQPSR----RDANNPAGLLSIAEETL 170

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
            EFLSKATGTAV+WVQMPGMKPGPDS+GI AIS  C GVAARACGLV L+P+++AEILKD
Sbjct: 171 AEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPSKIAEILKD 230

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSW+RDCRS+EV  + P G+ GTIEL+Y Q+YAPTTLAPARDFW LRYT  LE+GSLVV
Sbjct: 231 RPSWFRDCRSLEVFTMFPAGNGGTIELVYTQVYAPTTLAPARDFWTLRYTITLENGSLVV 290

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSL+ +  GPS   A  FVRAEMLPSGYLIRPCEGGGSIIHIVDH++LE W VPEVLR
Sbjct: 291 CERSLSGSGAGPSEAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWHVPEVLR 350

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESS ++AQK T+AALR++RQI+QE S   V G GR+PA LR  SQRLSRGFN+A+NG
Sbjct: 351 PLYESSKVVAQKMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNG 410

Query: 421 FTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
           F D GWS++  +G +DV + VNS  +K  G   +  N   +    VLCAKASMLLQ+VPP
Sbjct: 411 FNDNGWSLINCEGAEDVVLTVNS--TKNFGTTSNPANSL-TYPGGVLCAKASMLLQNVPP 467

Query: 481 AILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEF 539
           A+L+RFLREHRSEWAD +IDAYSAA +KA   + P  R   F G Q+I+PL HTIEHEE 
Sbjct: 468 AVLVRFLREHRSEWADFNIDAYSAATLKANSYTYPGMRPTRFTGSQIIMPLGHTIEHEEL 527

Query: 540 LEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPS 599
           LEVI+LE     +ED  +  DI LLQ+CSG+DENAVG C+EL+FAPID  F DDAP++PS
Sbjct: 528 LEVIRLEGHPMVQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLLPS 587

Query: 600 GFRIIPLDS-GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFE 658
           GFRIIPLDS   D     RTLDL S+LEVG   +  +GD+S+   S +SV+TIAFQF FE
Sbjct: 588 GFRIIPLDSRTSDAKGSQRTLDLTSSLEVGSGTSNTAGDASSS-QSARSVLTIAFQFPFE 646

Query: 659 MHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
             +Q+NVA+MA QYVR +I+SVQRVA+A+SPS  G   G +  PGSPEA TLA WIC+SY
Sbjct: 647 SSMQDNVANMAHQYVRSVISSVQRVAMAISPSGGGPALGPKLSPGSPEALTLAHWICKSY 706


>gi|15226808|ref|NP_181018.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
 gi|75096986|sp|O04291.1|ATB14_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-14; AltName:
           Full=HD-ZIP protein ATHB-14; AltName: Full=Homeodomain
           transcription factor ATHB-14; AltName: Full=Protein
           PHABULOSA
 gi|2145356|emb|CAA72007.1| HD-Zip protein [Arabidopsis thaliana]
 gi|3132474|gb|AAC16263.1| homeodomain transcription factor (ATHB-14) [Arabidopsis thaliana]
 gi|20152534|emb|CAD29659.1| homeodomain-leucine zipper protein 14 [Arabidopsis thaliana]
 gi|20466650|gb|AAM20642.1| homeodomain transcription factor [Arabidopsis thaliana]
 gi|23198254|gb|AAN15654.1| homeodomain transcription factor [Arabidopsis thaliana]
 gi|330253918|gb|AEC09012.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
          Length = 852

 Score =  951 bits (2457), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/716 (67%), Positives = 569/716 (79%), Gaps = 19/716 (2%)

Query: 9   SRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           +R+S D G     +D+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEP
Sbjct: 13  NRESPDKG-----LDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEP 67

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQ 128
           KQIKVWFQNRRCREKQRKEA+RLQ VNRKL AMNKLLMEENDRLQKQVS LVYEN   + 
Sbjct: 68  KQIKVWFQNRRCREKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSNLVYENGHMKH 127

Query: 129 QTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKA 187
           Q   A+   TTD SCESVV SGQ H       QH  RDA+ PAGLLSIAEE L EFLSKA
Sbjct: 128 QLHTASG-TTTDNSCESVVVSGQQHQQQNPNPQHQQRDANNPAGLLSIAEEALAEFLSKA 186

Query: 188 TGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD 247
           TGTAV+WVQM GMKPGPDSIGIVAIS  C+G+AARACGLV L+P +VAEILKDRPSW RD
Sbjct: 187 TGTAVDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLVSLEPMKVAEILKDRPSWLRD 246

Query: 248 CRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN 307
           CRSV+ ++V+P G+ GTIEL+Y Q+YAPTTLA ARDFW LRY++ LEDGS VVCERSL +
Sbjct: 247 CRSVDTLSVIPAGNGGTIELIYTQMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSLTS 306

Query: 308 TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 367
              GP+ P + +FVRAEM PSG+LIRPC+GGGSI+HIVDH+DL+ WSVPEV+RPLYESS 
Sbjct: 307 ATGGPTGPPSSNFVRAEMKPSGFLIRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYESSK 366

Query: 368 LIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           ++AQK T+AALRH+RQI+QE S     G GR+PA LR  SQRL RGFN+A+NGF D+GWS
Sbjct: 367 ILAQKMTVAALRHVRQIAQETSGEVQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWS 426

Query: 428 MLESDGIDDVTVHVNSSPSKMMGVQLSYVNGF-PSMSNAVLCAKASMLLQDVPPAILLRF 486
            + SDG +DVTV +N SP K  G Q  Y N F PS  + VLCAKASMLLQ+VPPA+L+RF
Sbjct: 427 PMGSDGAEDVTVMINLSPGKFGGSQ--YGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRF 484

Query: 487 LREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKL 545
           LREHRSEWAD  +DAY+AA+++A P ++P  RAG F   QVILPLA T+EHEE LEV++L
Sbjct: 485 LREHRSEWADYGVDAYAAASLRASPFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRL 544

Query: 546 ENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
           E  A+  EDM +  D++LLQLCSGVDEN VG CA+LVFAPID SF+DDAP++PSGFRIIP
Sbjct: 545 EGHAYSPEDMGLARDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRIIP 604

Query: 606 LDSGKDTP---SPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQ 662
           L+  K TP   S NRTLDLASALE G T  + +G++     + +SV+TIAFQF F+ H +
Sbjct: 605 LEQ-KSTPNGASANRTLDLASALE-GST--RQAGEADPNGCNFRSVLTIAFQFTFDNHSR 660

Query: 663 ENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           ++VASMARQYVR I+ S+QRVALA++P R GSN      P SPEA TL RWI +SY
Sbjct: 661 DSVASMARQYVRSIVGSIQRVALAIAP-RPGSNISPISVPTSPEALTLVRWISRSY 715


>gi|297826941|ref|XP_002881353.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327192|gb|EFH57612.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 859

 Score =  950 bits (2455), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/716 (67%), Positives = 569/716 (79%), Gaps = 19/716 (2%)

Query: 9   SRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           +R+S D G     +D+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEP
Sbjct: 20  NRESPDKG-----LDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEP 74

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQ 128
           KQIKVWFQNRRCREKQRKEA+RLQ VNRKL AMNKLLMEENDRLQKQVS LVYEN   +Q
Sbjct: 75  KQIKVWFQNRRCREKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSHLVYENGHMKQ 134

Query: 129 QTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKA 187
           Q   ++   TTD SCESVV SGQ H       QH  RDA+ PAGLLSIAEE L EFLSKA
Sbjct: 135 QLHTSSG-TTTDNSCESVVVSGQQHQQQNPNPQHLQRDANNPAGLLSIAEEALAEFLSKA 193

Query: 188 TGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD 247
           TGTAV+WVQM GMKPGPDSIGIVAIS  C+G+AARACGLV L+P +VAEILKDRPSW RD
Sbjct: 194 TGTAVDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLVSLEPMKVAEILKDRPSWLRD 253

Query: 248 CRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN 307
           CR V+ ++V+P G+ GTIEL+Y Q+YAPTTLA ARDFW LRY++ LEDGS VVCERS+ +
Sbjct: 254 CRCVDTLSVIPAGNGGTIELIYTQMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSITS 313

Query: 308 TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 367
              GP+ P +  FVRAEM PSG+LIRPCEGGGSI+HIVDH+DL+ WSVPEV+RPLYESS 
Sbjct: 314 ATGGPTGPPSSSFVRAEMRPSGFLIRPCEGGGSILHIVDHVDLDAWSVPEVMRPLYESSK 373

Query: 368 LIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           ++AQK T+AALRH+RQI+QE S     G GR+PA LR  SQRL RGFN+A+NGF D+GWS
Sbjct: 374 ILAQKMTVAALRHVRQIAQETSGEVQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWS 433

Query: 428 MLESDGIDDVTVHVNSSPSKMMGVQLSYVNGF-PSMSNAVLCAKASMLLQDVPPAILLRF 486
            + SDG +D+TV +N SP K+ G Q  Y N F PS  + VLCAKASMLLQ+VPPA+L+RF
Sbjct: 434 PMGSDGAEDITVMINLSPGKLCGSQ--YGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRF 491

Query: 487 LREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKL 545
           LREHRSEWAD  +DAY+AA+++A P ++P  RAG F   QVILPLA T+EHEE LEV++L
Sbjct: 492 LREHRSEWADYGVDAYAAASLRASPFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRL 551

Query: 546 ENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
           E  A+  EDM +  D++LLQLCSGVDEN VG CA+LVFAPID SF+DDAP++PSGFRIIP
Sbjct: 552 EGHAYSPEDMGLARDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRIIP 611

Query: 606 LDSGKDTP---SPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQ 662
           L+  K TP   S NRTLDLASALE G T  + +G++     + +SV+TIAFQF F+ H +
Sbjct: 612 LEQ-KSTPNGASTNRTLDLASALE-GST--RQAGEADPNGCNFRSVLTIAFQFTFDNHSR 667

Query: 663 ENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           ++VASMARQYVR I+ S+QRVALA++P R GSN      P SPEA TL RWI +SY
Sbjct: 668 DSVASMARQYVRSIVGSIQRVALAIAP-RPGSNISPISVPTSPEALTLVRWIARSY 722


>gi|187609457|sp|A2Z8L4.2|HOX9_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX9; AltName:
           Full=HD-ZIP protein HOX9; AltName: Full=Homeodomain
           transcription factor HOX9; AltName: Full=OsHB2; AltName:
           Full=OsHox9
          Length = 840

 Score =  949 bits (2454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/703 (67%), Positives = 563/703 (80%), Gaps = 19/703 (2%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K  MD+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNR
Sbjct: 22  KAGMDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNR 81

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCR+KQRKEASRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + +QQ QN +    
Sbjct: 82  RCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSL--G 139

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQM 197
            DTSCES VT      TPQ    +P RDAS P+GLL+IAEETLTEFLSKATGTAV+WV M
Sbjct: 140 NDTSCESNVT------TPQ----NPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPM 189

Query: 198 PGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVL 257
           PGMKPGPDS GIVA+SHGC GVAARACGLV L+PT++ EILKDRPSW+RDCRS+EV  + 
Sbjct: 190 PGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMF 249

Query: 258 PTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQA 317
           P G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ ++DGSLVVCERSL+ +  GPS   A
Sbjct: 250 PAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMDDGSLVVCERSLSGSGGGPSTASA 309

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
             FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS ++AQK T AA
Sbjct: 310 QQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAA 369

Query: 378 LRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           LRH+RQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DGI+DV
Sbjct: 370 LRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDV 429

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADS 497
            +  N+   +      +  N F +    V+CAKASMLLQ VPPA+L+RFLREHRSEWAD 
Sbjct: 430 IIACNAKKVRNTS---TSANAFVT-PGGVICAKASMLLQSVPPAVLVRFLREHRSEWADY 485

Query: 498 SIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
           + DAYSA+++K   CSLP  R   F G Q+I+PLAHT+E+EE LEV++LE  A   +D +
Sbjct: 486 NFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGL 545

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPN 616
           M  DI LLQLC+G+DE ++G+C +LVFAPID  F DDAP+I SGFR+IPLD   D     
Sbjct: 546 MSRDIHLLQLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAG 605

Query: 617 RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGI 676
           RTLDLAS+LEVG T  + +GD+S    + +SV+TIAFQF +EMHLQ++VA+MARQYVR I
Sbjct: 606 RTLDLASSLEVGSTA-QPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSI 664

Query: 677 IASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           ++SVQRV++A+SPSR G NAG +   G PEA TLARWICQSY+
Sbjct: 665 VSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQ 707


>gi|18076740|emb|CAC84277.1| HD-Zip protein [Zinnia violacea]
          Length = 849

 Score =  949 bits (2452), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/714 (66%), Positives = 561/714 (78%), Gaps = 27/714 (3%)

Query: 15  SGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           +  Q + +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 18  TASQNIKLDNGKYVRYTTEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77

Query: 75  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAA 134
           FQNRRCREKQRKE+SRLQ VN+KL+AMNKLLMEENDRLQKQVSQLV EN + RQQ    +
Sbjct: 78  FQNRRCREKQRKESSRLQTVNKKLSAMNKLLMEENDRLQKQVSQLVCENGYMRQQLHTGS 137

Query: 135 TLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVE 193
             A TD SCESV+T      TPQQ      RDA+ PAGLLSIAEETL EFLSKATGTAV+
Sbjct: 138 --AATDASCESVLT------TPQQSL----RDANNPAGLLSIAEETLAEFLSKATGTAVD 185

Query: 194 WVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEV 253
           WVQMPGMKPGPDS+GI AIS  C+GVAARACGLV L+PT++ EILKDRPSW+RDCR++EV
Sbjct: 186 WVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIVEILKDRPSWFRDCRNLEV 245

Query: 254 VNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPS 313
             + P G+ GTIEL+Y Q++APTTLAPARDFW LRYT+ LE+GSLVVCERSL+ +  GP+
Sbjct: 246 FTMFPAGNGGTIELVYTQIFAPTTLAPARDFWTLRYTTTLENGSLVVCERSLSGSGAGPN 305

Query: 314 MPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKT 373
              A  FVR EMLPSGYLIRPCEGGGSI+HIVDH++LE WSVPEVLRPLYESS ++AQK 
Sbjct: 306 PAAASQFVRGEMLPSGYLIRPCEGGGSIVHIVDHLNLEAWSVPEVLRPLYESSKVVAQKM 365

Query: 374 TMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDG 433
           T+AALR++RQI+QE S   V G GR+PA LR LSQRLSRGFN+A+NGF+D+GWS++  DG
Sbjct: 366 TIAALRYIRQIAQESSGEVVYGVGRQPAVLRTLSQRLSRGFNDAVNGFSDDGWSLMNCDG 425

Query: 434 IDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSE 493
            +DV V VNS  +K +   ++     P +   ++CAKASML ++VPP +L+RFLREHRSE
Sbjct: 426 AEDVIVAVNS--TKNLNNSMNSSTSPPYL-GGIICAKASMLFENVPPGVLVRFLREHRSE 482

Query: 494 WADSSIDAYSAAAVKAGPC-SLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHY 551
           WAD ++DAYSAA+VKA P  + P  R   F G Q+I+PL HTIEHEE LEV++LE  A  
Sbjct: 483 WADFNVDAYSAASVKANPYNTYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGQALG 542

Query: 552 REDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKD 611
           +ED  M  DI LLQLC+G+DEN+VG C+EL+FAPID  F DDAP+IPSGFRIIPLD  K 
Sbjct: 543 QEDPFMSRDIHLLQLCNGIDENSVGACSELIFAPIDEMFPDDAPLIPSGFRIIPLDP-KS 601

Query: 612 TPSPN-------RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQEN 664
             + N        TLDL S+L+V PT N  S D ST C +T+SV+TI FQF FE  L E+
Sbjct: 602 VDAKNALVTTHRTTLDLTSSLDVTPTPNHGSTDVST-CQTTRSVLTITFQFPFENSLAES 660

Query: 665 VASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           VA+MARQYVR +I SVQRVA+A+SPS      G +P PGSPEA TLA+WICQSY
Sbjct: 661 VATMARQYVRSVINSVQRVAMAISPSGLSPCVGPKPSPGSPEALTLAQWICQSY 714


>gi|349500387|dbj|BAL02986.1| class III homeodomain-leucine zipper protein, partial [Gnetum
           parvifolium]
          Length = 705

 Score =  949 bits (2452), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/660 (71%), Positives = 540/660 (81%), Gaps = 16/660 (2%)

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQ 128
            QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN + RQ
Sbjct: 1   NQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQ 60

Query: 129 QTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKAT 188
           Q  NAA++A  DTSCESVVTSGQH   P    QHPPRDASPAGLLSIAEETLTEFLSKA 
Sbjct: 61  QLHNAASVAGADTSCESVVTSGQHQ--PNPTPQHPPRDASPAGLLSIAEETLTEFLSKAK 118

Query: 189 GTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDC 248
           G AV+WVQMPGMKPGPDSIGIVAIS+ CTGVAARACGLVGL+PT+VAEILKDRPSW RDC
Sbjct: 119 GAAVDWVQMPGMKPGPDSIGIVAISNTCTGVAARACGLVGLEPTKVAEILKDRPSWLRDC 178

Query: 249 RSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           R +EV+   PTG+ GTIE+LYMQ YAPT    ARDFW LRYT+VL+DGSLVVCERSL++T
Sbjct: 179 RCLEVMTAYPTGNGGTIEVLYMQTYAPTINLSARDFWSLRYTTVLDDGSLVVCERSLSST 238

Query: 309 QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL 368
             G  +P   +FVRAEMLPSGY+I+PCEGGGSII IVDH DLEPWSVPEVLRPLYESST+
Sbjct: 239 LAGQVLPSVANFVRAEMLPSGYIIQPCEGGGSIIRIVDHFDLEPWSVPEVLRPLYESSTI 298

Query: 369 IAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS- 427
           +AQK T+AA+R LRQI+QE S   V GWGR+PA LR  SQRLSRGFNEA+NGF DEGWS 
Sbjct: 299 LAQKMTIAAMRRLRQIAQESSGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFADEGWSI 358

Query: 428 MLESDG-IDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
           M  +DG ++DVT+ +NSSP+K      +  + F S    +LCAK+SMLLQ+VPPA+L+RF
Sbjct: 359 MTTADGSVEDVTISINSSPTKHASAAAAAFSVFGS-GGGILCAKSSMLLQNVPPALLIRF 417

Query: 487 LREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKL 545
           LREHRSEWADS+IDAYSAAA+K+ P ++P  RAG+F G QVILPLAHT+E+EEFLEVIKL
Sbjct: 418 LREHRSEWADSNIDAYSAAAIKSSPFTIPGTRAGSFSGSQVILPLAHTVENEEFLEVIKL 477

Query: 546 ENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
           +      ED ++  D+FLLQLCSGVDE+A G CAELV APID SF+DDAP++PSGFR+IP
Sbjct: 478 DGHGLAHEDALLSRDMFLLQLCSGVDESAAGGCAELVLAPIDESFADDAPLLPSGFRVIP 537

Query: 606 LDSGKDTPSPN--RTLDLASALEVGPTGNKASGDSSTQCGST----KSVITIAFQFAFEM 659
           L+S  D+P  N  RTLDLASALEVG   ++AS +S      T    +SV+TIAFQF++E 
Sbjct: 538 LESRSDSPGANAGRTLDLASALEVGSGASRASNNSEGGAAGTNSNVRSVLTIAFQFSYES 597

Query: 660 HLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           HL+ENVA+MARQYVR + ASVQRVA+ALSPSR       RPPPG PEA TLARWICQSYR
Sbjct: 598 HLRENVAAMARQYVRSVAASVQRVAMALSPSRLAP----RPPPGGPEALTLARWICQSYR 653


>gi|63095203|gb|AAY32332.1| HB1 [Phyllostachys praecox]
          Length = 824

 Score =  948 bits (2450), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/707 (66%), Positives = 562/707 (79%), Gaps = 20/707 (2%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           G  K  +D+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+RECPIL+NIEPKQIKVWF
Sbjct: 2   GYDKAGIDSGKYVRYTPEQVEALERMYAECPKPSSTRRQQLLRECPILANIEPKQIKVWF 61

Query: 76  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAAT 135
           QNRRCR+KQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN + +QQ QN + 
Sbjct: 62  QNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENAYMKQQLQNPSL 121

Query: 136 LATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEW 194
               DTSCES VT+           Q+P +DAS P+GLLSIAEETLTEFLSKATGTAV+W
Sbjct: 122 --ANDTSCESNVTT-----------QNPLKDASNPSGLLSIAEETLTEFLSKATGTAVDW 168

Query: 195 VQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVV 254
           VQMPGMKPGPDS+GIVAISHGC GVAARAC LV L+PT+V EILKDRPSW+ D +S+EV 
Sbjct: 169 VQMPGMKPGPDSVGIVAISHGCRGVAARACDLVNLEPTKVVEILKDRPSWFCDRQSLEVF 228

Query: 255 NVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSM 314
            + P G+ GTIEL+Y QLYAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ +  GPS 
Sbjct: 229 TMFPAGNGGTIELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSA 288

Query: 315 PQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTT 374
             A  FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS ++AQK T
Sbjct: 289 ASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMT 348

Query: 375 MAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
            AALRH+RQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DGI
Sbjct: 349 TAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGI 408

Query: 435 DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEW 494
           +DV +  N   SK +    +  N F +    V+CAKASMLLQ VPPA+L+RFLREHRSEW
Sbjct: 409 EDVIIACN---SKKIRNNSTAANAFGA-PGGVICAKASMLLQSVPPAVLVRFLREHRSEW 464

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYRE 553
           AD + DAYSA A+K   CSLP  R   F G Q+I+PLAHT+E+EE LEVI+LE  A   +
Sbjct: 465 ADYNFDAYSALALKTSSCSLPGLRPTRFSGSQIIMPLAHTVENEEILEVIRLEGQALTHD 524

Query: 554 DMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTP 613
           + ++  DI LLQLC+G+DE ++G+C +LVFAPID  F DDAP+I SGFR+IPLD   D  
Sbjct: 525 EGLLSRDIHLLQLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGA 584

Query: 614 SPNRTLDLASALEVGPTGNKASGDSS-TQCGSTKSVITIAFQFAFEMHLQENVASMARQY 672
              RTLDLAS+LEVG T  +A+GD+S   C + +SV+TIAFQF +E+HLQ++VA+MARQY
Sbjct: 585 PTGRTLDLASSLEVGSTTQQATGDASLDDCRNLRSVLTIAFQFPYEIHLQDSVATMARQY 644

Query: 673 VRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           VR ++++VQRV++A+SP R G NAG +   G PEA TLARWICQSY+
Sbjct: 645 VRSVVSAVQRVSMAISPPRSGVNAGQKIFSGFPEAATLARWICQSYQ 691


>gi|63115354|gb|AAY33856.1| class III HD-zip protein [Gossypium barbadense]
          Length = 836

 Score =  947 bits (2449), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/705 (66%), Positives = 559/705 (79%), Gaps = 30/705 (4%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           +D GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQ K  FQNRRCR
Sbjct: 19  LDTGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQFKALFQNRRCR 78

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ--TQNAATLATT 139
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN + RQQ  T NA+    T
Sbjct: 79  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMRQQLHTVNASA---T 135

Query: 140 DTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           D SC+S VT+ QH L          R+A+ PAGLLSIAEETL EFLSKATGTAV WVQMP
Sbjct: 136 DASCDSAVTTPQHSL----------RNANNPAGLLSIAEETLAEFLSKATGTAVNWVQMP 185

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDS+GI A S  C+G+AARACGLV L+PT++AEILKDRPSW+RDCR +EV  + P
Sbjct: 186 GMKPGPDSVGIFATSQSCSGMAARACGLVSLEPTKIAEILKDRPSWFRDCRKLEVFTMFP 245

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
            G+ GTIEL+Y Q++APTTLAPARDFW LRYT+ LE+GSLVVCERSL+ +  GPS+  A 
Sbjct: 246 AGNGGTIELVYTQMFAPTTLAPARDFWTLRYTTTLENGSLVVCERSLSGSGAGPSVASAA 305

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
            FVRAE+LPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLRPLYESS +IAQK T+ AL
Sbjct: 306 QFVRAEVLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRVIAQKMTIPAL 365

Query: 379 RHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
           R++RQI+QE S   V   GR+PA LR  SQRLSRGFNEA+NGF ++GWS++  DG +DV 
Sbjct: 366 RYVRQIAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNEAINGFNEDGWSIMNCDGTEDVI 425

Query: 439 VHVNS----SPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEW 494
           + +NS    S S  +   LS++ G       VLCAKASMLLQ+VPPA+L+RFLREHR EW
Sbjct: 426 IAINSGKSLSNSSNLTTGLSFLGG-------VLCAKASMLLQNVPPAVLVRFLREHRLEW 478

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYRE 553
           AD ++DAYSAA++KAG  + P  R  +F G Q+I+PL  T+EHEE LEVI+LE  +  +E
Sbjct: 479 ADFNVDAYSAASLKAGTYTYPGMRPTSFTGSQIIMPLGQTVEHEELLEVIRLEGQSLTQE 538

Query: 554 DMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTP 613
           D ++  DI LLQ+CSG+D+NAVG C+ELVFAPID  F DDA ++PSGFRIIPL+S  D+ 
Sbjct: 539 DALLSRDIHLLQICSGIDDNAVGACSELVFAPIDEMFPDDAALLPSGFRIIPLESKPDSL 598

Query: 614 SPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYV 673
           + NRTLDL S+LEVGP  ++A+GDS +Q  + +SV+TIAFQF F+ +L++NVA+MARQYV
Sbjct: 599 ATNRTLDLTSSLEVGPATSQAAGDSPSQ--NARSVLTIAFQFPFDTNLRDNVATMARQYV 656

Query: 674 RGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           R +I+SVQR A+A+SP       G +P PGSPEA TLA WICQSY
Sbjct: 657 RSVISSVQRXAMAISPCGSSPTIGPKPSPGSPEALTLAHWICQSY 701


>gi|115482560|ref|NP_001064873.1| Os10g0480200 [Oryza sativa Japonica Group]
 gi|75168160|sp|Q9AV49.1|HOX9_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX9; AltName:
           Full=HD-ZIP protein HOX9; AltName: Full=Homeodomain
           transcription factor HOX9; AltName: Full=OsHB2; AltName:
           Full=OsHox9
 gi|13384370|gb|AAK21338.1|AC024594_2 putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|31432701|gb|AAP54299.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|78708820|gb|ABB47795.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|113639482|dbj|BAF26787.1| Os10g0480200 [Oryza sativa Japonica Group]
          Length = 840

 Score =  947 bits (2448), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/703 (67%), Positives = 562/703 (79%), Gaps = 19/703 (2%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K  MD+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNR
Sbjct: 22  KAGMDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNR 81

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCR+KQRKEASRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + +QQ QN +    
Sbjct: 82  RCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSL--G 139

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQM 197
            DTSCES VT      TPQ    +P RDAS P+GLL+IAEETLTEFLSKATGTAV+WV M
Sbjct: 140 NDTSCESNVT------TPQ----NPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPM 189

Query: 198 PGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVL 257
           PGMKPGPDS GIVA+SHGC GVAARACGLV L+PT++ EILKDRPSW+RDCRS+EV  + 
Sbjct: 190 PGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMF 249

Query: 258 PTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQA 317
           P G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ +  GPS   A
Sbjct: 250 PAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASA 309

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
             FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS ++AQK T AA
Sbjct: 310 QQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAA 369

Query: 378 LRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           LRH+RQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DGI+DV
Sbjct: 370 LRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDV 429

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADS 497
            +  N+   +      +  N F +    V+CAKASMLLQ VPPA+L+RFLREHRSEWAD 
Sbjct: 430 IIACNAKKVRNTS---TSANAFVT-PGGVICAKASMLLQSVPPAVLVRFLREHRSEWADY 485

Query: 498 SIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
           + DAYSA+++K   CSLP  R   F G Q+I+PLAHT+E+EE LEV++LE  A   +D +
Sbjct: 486 NFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGL 545

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPN 616
           M  DI LLQLC+G+DE ++G+C +LV APID  F DDAP+I SGFR+IPLD   D     
Sbjct: 546 MSRDIHLLQLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAG 605

Query: 617 RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGI 676
           RTLDLAS+LEVG T  + +GD+S    + +SV+TIAFQF +EMHLQ++VA+MARQYVR I
Sbjct: 606 RTLDLASSLEVGSTA-QPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSI 664

Query: 677 IASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           ++SVQRV++A+SPSR G NAG +   G PEA TLARWICQSY+
Sbjct: 665 VSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQ 707


>gi|187471155|sp|A2XBL9.2|HOX10_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX10; AltName:
           Full=HD-ZIP protein HOX10; AltName: Full=Homeodomain
           transcription factor HOX10; AltName: Full=OsHB1;
           AltName: Full=OsHox10
          Length = 839

 Score =  947 bits (2447), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/721 (65%), Positives = 565/721 (78%), Gaps = 20/721 (2%)

Query: 2   MAVSSGGSRDSRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE 59
           MA +      S D GG   +  MD+GKYVRYTPEQVEALER+Y +CPKP+S RRQQL+RE
Sbjct: 1   MAAAVAMRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRE 60

Query: 60  CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           CPIL+NIEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQL
Sbjct: 61  CPILANIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQL 120

Query: 120 VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEE 178
           V+EN   RQQ QN  T    DTSCES VT      TPQ    +P RDAS P+GLLSIAEE
Sbjct: 121 VHENAHMRQQLQN--TPLANDTSCESNVT------TPQ----NPLRDASNPSGLLSIAEE 168

Query: 179 TLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEIL 238
           TLTEFLSKATGTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+V EIL
Sbjct: 169 TLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEIL 228

Query: 239 KDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL 298
           KDRPSW+RDCR++EV  ++P G+ GT+EL+Y QLYAPTTL PARDFW LRYT+ +EDGSL
Sbjct: 229 KDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSL 288

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
           VVCERSL+ +  GPS   A  +VRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEV
Sbjct: 289 VVCERSLSGSGGGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEV 348

Query: 359 LRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEAL 418
           LRPLYESS ++AQK T AALRH+RQI+QE S   V   GR+PA LR  SQRLSRGFN+A+
Sbjct: 349 LRPLYESSRVVAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAI 408

Query: 419 NGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDV 478
           +GF D+GWS++  DG++DV +  NS+             G P     ++CAKASMLLQ V
Sbjct: 409 SGFNDDGWSIMGGDGVEDVVIACNSTKKIRSNSNAGIAFGAP---GGIICAKASMLLQSV 465

Query: 479 PPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHE 537
           PPA+L+RFLREHRSEWAD +IDAY A+ +K   CSLP  R   F G Q+I+PLAHT+E+E
Sbjct: 466 PPAVLVRFLREHRSEWADYNIDAYLASTLKTSACSLPGLRPMRFSGSQIIIPLAHTVENE 525

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPII 597
           E LEV++LE      ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F D+ P+I
Sbjct: 526 EILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLI 584

Query: 598 PSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAF 657
            SGFR+IPLD   D  S  RTLDLAS+LEVG    +ASGD+S    + +SV+TIAFQF +
Sbjct: 585 SSGFRVIPLDMKTDGASSGRTLDLASSLEVGSATAQASGDASADDCNLRSVLTIAFQFPY 644

Query: 658 EMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQS 717
           E+HLQ++VA+MARQYVR I+++VQRV++A+SPS+ G NAG R   G PEA TLARW+CQS
Sbjct: 645 ELHLQDSVAAMARQYVRSIVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATLARWVCQS 704

Query: 718 Y 718
           Y
Sbjct: 705 Y 705


>gi|222613019|gb|EEE51151.1| hypothetical protein OsJ_31913 [Oryza sativa Japonica Group]
          Length = 816

 Score =  946 bits (2446), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/700 (67%), Positives = 561/700 (80%), Gaps = 19/700 (2%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR
Sbjct: 1   MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCR 60

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           +KQRKEASRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + +QQ QN +     DT
Sbjct: 61  DKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSL--GNDT 118

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
           SCES VT      TPQ    +P RDAS P+GLL+IAEETLTEFLSKATGTAV+WV MPGM
Sbjct: 119 SCESNVT------TPQ----NPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGM 168

Query: 201 KPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTG 260
           KPGPDS GIVA+SHGC GVAARACGLV L+PT++ EILKDRPSW+RDCRS+EV  + P G
Sbjct: 169 KPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAG 228

Query: 261 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHF 320
           + GTIEL+YMQ+YAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ +  GPS   A  F
Sbjct: 229 NGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQF 288

Query: 321 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH 380
           VRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS ++AQK T AALRH
Sbjct: 289 VRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRH 348

Query: 381 LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
           +RQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DGI+DV + 
Sbjct: 349 IRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIA 408

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSID 500
            N+   +      +  N F +    V+CAKASMLLQ VPPA+L+RFLREHRSEWAD + D
Sbjct: 409 CNAKKVRNTS---TSANAFVT-PGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFD 464

Query: 501 AYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           AYSA+++K   CSLP  R   F G Q+I+PLAHT+E+EE LEV++LE  A   +D +M  
Sbjct: 465 AYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSR 524

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTL 619
           DI LLQLC+G+DE ++G+C +LV APID  F DDAP+I SGFR+IPLD   D     RTL
Sbjct: 525 DIHLLQLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAGRTL 584

Query: 620 DLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIAS 679
           DLAS+LEVG T  + +GD+S    + +SV+TIAFQF +EMHLQ++VA+MARQYVR I++S
Sbjct: 585 DLASSLEVGSTA-QPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSS 643

Query: 680 VQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           VQRV++A+SPSR G NAG +   G PEA TLARWICQSY+
Sbjct: 644 VQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQ 683


>gi|242039345|ref|XP_002467067.1| hypothetical protein SORBIDRAFT_01g019120 [Sorghum bicolor]
 gi|241920921|gb|EER94065.1| hypothetical protein SORBIDRAFT_01g019120 [Sorghum bicolor]
          Length = 838

 Score =  946 bits (2446), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/700 (66%), Positives = 551/700 (78%), Gaps = 19/700 (2%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD GKYVRYTPEQVE LER+Y ECPKPSS RRQQL+RECPILSNIEPKQIKVWFQNRRCR
Sbjct: 23  MDTGKYVRYTPEQVETLERVYAECPKPSSARRQQLLRECPILSNIEPKQIKVWFQNRRCR 82

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           +KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + +QQ QN +     D 
Sbjct: 83  DKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSL--ANDA 140

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
           SC+S VT+  +            RDAS P+GLLSIAEETLTEFLSKATGTA++WVQMPGM
Sbjct: 141 SCDSNVTAPANL-----------RDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGM 189

Query: 201 KPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTG 260
           KPGPDS GIV ISHG  GVAARACGLV L+PT++ EILKDRPSW+RDCRS+EV  +LP G
Sbjct: 190 KPGPDSFGIVTISHGGRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMLPAG 249

Query: 261 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHF 320
           + GTIEL+YMQ+YAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ + +G S   A  F
Sbjct: 250 NGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAATAQQF 309

Query: 321 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH 380
           VRAEMLPSGYL+R CEGGGSI+ IVDH+DL+ WSVPEVLRPLYESS ++AQK T AALRH
Sbjct: 310 VRAEMLPSGYLVRQCEGGGSIVRIVDHLDLDAWSVPEVLRPLYESSRVVAQKMTTAALRH 369

Query: 381 LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
           LRQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DGI+DV + 
Sbjct: 370 LRQIAQETSGEVVYAMGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMAGDGIEDVIIA 429

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSID 500
            NS   +  G   +   G P     ++CAKASMLLQ VPPA+L+RFLREHRSEWAD + D
Sbjct: 430 CNSKKIR-SGSNPATAFGAP---GGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNFD 485

Query: 501 AYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           AYSA+A+K  PCSLP  R   F G Q+I+PLAHT+E+EE LEV++LE      ++ ++  
Sbjct: 486 AYSASALKTSPCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQTLTHDEGLLSR 545

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTL 619
           DI LLQLC+G+DE ++G+C +LVFAPID  F DDAP+I SGFR+IPLD   D  S  RTL
Sbjct: 546 DIHLLQLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDIKTDGLSSGRTL 605

Query: 620 DLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIAS 679
           DLAS+LEVG T  +AS D S    + +SV+TIAFQF +E+HLQ+ VA+MARQYVR I+++
Sbjct: 606 DLASSLEVGATTQQASADGSQDACNLRSVLTIAFQFPYEIHLQDTVAAMARQYVRSIVSA 665

Query: 680 VQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           VQRV++A+SPS+ G N G +   G PEA TL RWICQSYR
Sbjct: 666 VQRVSMAISPSQSGLNTGQKIISGFPEAATLVRWICQSYR 705


>gi|302190096|dbj|BAJ14107.1| PHABULOSA [Juncus prismatocarpus subsp. leschenaultii]
          Length = 857

 Score =  946 bits (2445), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/717 (64%), Positives = 573/717 (79%), Gaps = 21/717 (2%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD GKYVRYTPEQVEALER+Y+ECPKPSS++RQQLIRE P+L NIEPKQIKVWFQNRRCR
Sbjct: 8   MDGGKYVRYTPEQVEALERVYNECPKPSSLKRQQLIRENPLLVNIEPKQIKVWFQNRRCR 67

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN + RQQ  N  ++ATTD 
Sbjct: 68  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLHNQPSVATTDN 127

Query: 142 SCESVVTSGQHHLTPQQQH--------QHPPRDAS-PAGLLSIAEETLTEFLSKATGTAV 192
           SC+SVV+ GQ     QQ          Q+PPRD + PAGLL+IAEETL EFLSKATGT+V
Sbjct: 128 SCDSVVSHGQKSQHGQQSQRGQQIALTQNPPRDLNNPAGLLAIAEETLAEFLSKATGTSV 187

Query: 193 EWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVE 252
           EWV + GMKPGPDS+GI+A+S+ CTGVAARACGLV L+PT+VAEILKD+ SWYRDCR ++
Sbjct: 188 EWVPLVGMKPGPDSMGIIAVSNNCTGVAARACGLVSLEPTKVAEILKDKMSWYRDCRRLD 247

Query: 253 VVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN-NTQNG 311
           V+ ++PTG+ G IEL+YMQ YAPTT+APARDFW +RYT+ L+DGSLV+CERSL   T  G
Sbjct: 248 VLTIIPTGNGGNIELIYMQTYAPTTIAPARDFWTVRYTTALDDGSLVICERSLTPTTTGG 307

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
           P  P    FVRAEMLPSGYLIRPC+GGGS+IHIVDH+DL+ W+VPEV+RPLYES  ++AQ
Sbjct: 308 PVGPTTAGFVRAEMLPSGYLIRPCDGGGSMIHIVDHVDLDAWNVPEVIRPLYESPKVLAQ 367

Query: 372 KTTMAALRHLRQISQEVS-QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
           KTT+AA+R++RQI+ E+S + S TG GR+PA LR  SQRLSRGFN+A+NGF D+GWS+L 
Sbjct: 368 KTTIAAMRYIRQIAHELSGEVSFTG-GRQPAVLRTFSQRLSRGFNDAVNGFVDDGWSLLG 426

Query: 431 SDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH 490
           SDG DDV+V VNSSP K++G   S    F S+   +LCAK+SMLLQ+VPPA+L++FLREH
Sbjct: 427 SDGSDDVSVAVNSSPDKLLGPHASLAL-FSSLGGGILCAKSSMLLQNVPPALLVQFLREH 485

Query: 491 RSEWADSSIDAYSAAAVKA-GPCSLPVPRAGN--FGGQVILPLAHTIEHEEFLEVIKLEN 547
           R+EWAD S+D YSAA++++  P ++P  R+ N  +  QVILPLAHT+E+EE LEV++LE 
Sbjct: 486 RAEWADCSVDTYSAASLRSNNPFAVPGLRSNNGLWANQVILPLAHTVENEELLEVVRLEG 545

Query: 548 MAHYRED-MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPL 606
              + +D +++  D++LLQLC+G+DENA G CA+LVFAPID S +DDAP++ SGFR+ PL
Sbjct: 546 HHGFNQDELVLSRDMYLLQLCNGIDENAPGACAQLVFAPIDESLADDAPLLASGFRLTPL 605

Query: 607 DSGKDTPSPNRTLDLASALEVGP-TGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENV 665
           +   D  +  RTLDLAS LE+ P  G+      ST    ++SV+T+AFQFA+E HL++NV
Sbjct: 606 EPKNDGAAQTRTLDLASTLEIKPCNGSTRHASDSTSASHSRSVLTLAFQFAYEHHLRDNV 665

Query: 666 ASMARQYVRGIIASVQRVALALSPSRFGSN---AGLRPPPGSPEAHTLARWICQSYR 719
           A MARQYVR ++ASVQRVA+A+SPSR GS     G++   GSPEA TL  WI +SYR
Sbjct: 666 AIMARQYVRTVVASVQRVAMAISPSRVGSGVQLGGVKGSNGSPEAVTLVDWIVKSYR 722


>gi|24417151|dbj|BAC22514.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 848

 Score =  945 bits (2443), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/710 (66%), Positives = 559/710 (78%), Gaps = 27/710 (3%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K  +DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 21  KHQLDNGKYVRYTTEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 80

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKE+SRLQ VN+KL+AMNKLLMEENDRLQKQVSQLV EN + RQQ    +  A 
Sbjct: 81  RCREKQRKESSRLQTVNKKLSAMNKLLMEENDRLQKQVSQLVCENGYMRQQLHTGS--AA 138

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQM 197
           TD SCESV+T      TPQQ      RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQM
Sbjct: 139 TDASCESVLT------TPQQSL----RDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 188

Query: 198 PGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVL 257
           PGMKPGPDS+GI AIS  C+GVAARACGLV L+PT++ EILKDRPSW+RDCR++EV  + 
Sbjct: 189 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIVEILKDRPSWFRDCRNLEVFTMF 248

Query: 258 PTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQA 317
           P G+ GTIEL+Y Q++APTTLAPARDFW LRYT+ LE+GSLVVCERSL+ +  GP+   A
Sbjct: 249 PAGNGGTIELVYTQIFAPTTLAPARDFWTLRYTTTLENGSLVVCERSLSGSGAGPNPAAA 308

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
             FVR EMLPSGYLIRPCEGGGSI+HIVDH++LE WSVPEVLRPLYESS ++AQK T+AA
Sbjct: 309 SQFVRGEMLPSGYLIRPCEGGGSIVHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAA 368

Query: 378 LRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           LR++RQI+QE S   V G GR+PA LR LSQRLSRGFN+A+NGF+D+GWS++  DG +DV
Sbjct: 369 LRYIRQIAQESSGEVVYGVGRQPAVLRTLSQRLSRGFNDAVNGFSDDGWSLMNCDGAEDV 428

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADS 497
            V VNS  +K +   ++     P +   ++CAKASML ++VPP +L+RFLREHRSEWAD 
Sbjct: 429 IVAVNS--TKNLNNSMNSSTSPPYL-GGIICAKASMLFENVPPGVLVRFLREHRSEWADF 485

Query: 498 SIDAYSAAAVKAGPC-SLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDM 555
           ++DAYSAA+VKA P  + P  R   F G Q+I+PL HTIEHEE LEV++LE  A  +ED 
Sbjct: 486 NVDAYSAASVKANPYNTYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGQALGQEDP 545

Query: 556 IMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSP 615
            M  DI LLQLC+G+DEN+VG C+EL+FAPID  F DDAP+IPSGFRIIPLD  K   + 
Sbjct: 546 FMSRDIHLLQLCNGIDENSVGACSELIFAPIDEMFPDDAPLIPSGFRIIPLDP-KSVDAK 604

Query: 616 N-------RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASM 668
           N        TLDL S+L+V PT N  S D ST C +T+SV+TI FQF FE  L E+VA+M
Sbjct: 605 NALVTTHRTTLDLTSSLDVTPTPNHGSTDVST-CQTTRSVLTITFQFPFENSLAESVATM 663

Query: 669 ARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           ARQYVR +I SVQRVA+A+SPS      G +P PGSPEA TLA+WICQSY
Sbjct: 664 ARQYVRSVINSVQRVAMAISPSGLSPCVGPKPSPGSPEALTLAQWICQSY 713


>gi|24417149|dbj|BAC22513.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 846

 Score =  944 bits (2440), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/704 (67%), Positives = 552/704 (78%), Gaps = 28/704 (3%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           +DNGKYVRYT EQVEALER+Y ECPKPSS++RQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 29  LDNGKYVRYTAEQVEALERVYAECPKPSSLKRQQLIRECPILSNIEPKQIKVWFQNRRCR 88

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVSQLVYEN + RQQ   A ++  TD 
Sbjct: 89  EKQRKEASRLQMVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYMRQQLHTAQSV--TDA 146

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
           SCES VT+ QH L          RDA+ PAGLLSIAEETLTEFLSKATGTAV+WVQMPGM
Sbjct: 147 SCESAVTTPQHSL----------RDANNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGM 196

Query: 201 KPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTG 260
           KPGPDS+GI AIS  C+GVAARACGLV L+PT++ EILKDR SW+RDCR++EV+ +LP G
Sbjct: 197 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIVEILKDRTSWFRDCRNLEVLTMLPAG 256

Query: 261 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHF 320
           + GTIEL+Y Q+YAPTTLAPARDFW LRYT+ LE+GSLVVCERSL+    GP+   A  F
Sbjct: 257 NGGTIELVYTQVYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGPGGGPNAAAASQF 316

Query: 321 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH 380
           VR EMLPSGYLIRPC+GGGSIIHIVDH++LEPWS PEVLRPLYESS ++AQK T+AALR+
Sbjct: 317 VRGEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSAPEVLRPLYESSKVVAQKMTIAALRY 376

Query: 381 LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
           +RQI+QE S   V G GR+PA LR LSQRLSRGFN+A+NGF D+GWS++  DG +DV V 
Sbjct: 377 IRQIAQESSGEVVYGLGRQPAILRTLSQRLSRGFNDAINGFNDDGWSLMNCDGAEDVIVS 436

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSID 500
           +NS  +K +    +  N   S    VLCAKASML  +VPPA+L+RFLREHRSEWAD ++D
Sbjct: 437 INS--TKNLNTSTNSSNPL-SFLGGVLCAKASMLFHNVPPAVLVRFLREHRSEWADFNVD 493

Query: 501 AYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           AYSAA+VKA P      R   F G QVI+PL  TIEHEE LEVI+LE  A  +ED  +  
Sbjct: 494 AYSAASVKASPYGYQGIRPTRFTGSQVIMPLGQTIEHEEMLEVIRLEGHAVGQEDPFVSR 553

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTP-----S 614
           DI LLQLCSG+DENAVG C+ELVFAPID  F DDAP+IPSGFRIIPL+     P     +
Sbjct: 554 DIHLLQLCSGIDENAVGACSELVFAPIDEMFPDDAPLIPSGFRIIPLEPKSGDPKDAAGT 613

Query: 615 PNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVR 674
            +RTLDL S+LEVG + N  S D      + +SV+TIAFQF FE +L ++VA+MARQYVR
Sbjct: 614 THRTLDLTSSLEVGQSTNHGSSD------NMRSVLTIAFQFPFENNLADSVATMARQYVR 667

Query: 675 GIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
            +I SVQRVA+A+SPS    +   +  P SPEA TLA+WICQSY
Sbjct: 668 SVINSVQRVAMAISPSGLSPSLAPKLSPSSPEALTLAQWICQSY 711


>gi|115450213|ref|NP_001048707.1| Os03g0109400 [Oryza sativa Japonica Group]
 gi|75128608|sp|Q6TAQ6.1|HOX10_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX10; AltName:
           Full=HD-ZIP protein HOX10; AltName: Full=Homeodomain
           transcription factor HOX10; AltName: Full=OsHB1;
           AltName: Full=OsHox10
 gi|37813100|gb|AAR04340.1| homeodomain leucine-zipper protein Hox10 [Oryza sativa Japonica
           Group]
 gi|108705779|gb|ABF93574.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|113547178|dbj|BAF10621.1| Os03g0109400 [Oryza sativa Japonica Group]
 gi|215717163|dbj|BAG95526.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 839

 Score =  944 bits (2440), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/721 (65%), Positives = 564/721 (78%), Gaps = 20/721 (2%)

Query: 2   MAVSSGGSRDSRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE 59
           MA +      S D GG   +  MD+GKYVRYTPEQVEALER+Y +CPKP+S RRQQL+RE
Sbjct: 1   MAAAVAMRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRE 60

Query: 60  CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           CPIL+NIEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQL
Sbjct: 61  CPILANIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQL 120

Query: 120 VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEE 178
           V+EN   RQQ QN  T    DTSCES VT      TPQ    +P RDAS P+GLLSIAEE
Sbjct: 121 VHENAHMRQQLQN--TPLANDTSCESNVT------TPQ----NPLRDASNPSGLLSIAEE 168

Query: 179 TLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEIL 238
           TLTEFLSKATGTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+V EIL
Sbjct: 169 TLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEIL 228

Query: 239 KDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL 298
           KDRPSW+RDCR++EV  ++P G+ GT+EL+Y QLYAPTTL PARDFW LRYT+ +EDGSL
Sbjct: 229 KDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSL 288

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
           VVCERSL+ +  GPS   A  +VRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEV
Sbjct: 289 VVCERSLSGSGGGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEV 348

Query: 359 LRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEAL 418
           LRPLYESS ++AQK T AALRH+RQI+QE S   V   GR+PA LR  SQRLSRGFN+A+
Sbjct: 349 LRPLYESSRVVAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAI 408

Query: 419 NGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDV 478
           +GF D+GWS++  DG++DV +  NS+             G P     ++CAKASMLLQ V
Sbjct: 409 SGFNDDGWSIMGGDGVEDVVIACNSTKKIRSNSNAGIAFGAP---GGIICAKASMLLQSV 465

Query: 479 PPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHE 537
           PPA+L+RFLREHRSEWAD +IDAY A+ +K   CSL   R   F G Q+I+PLAHT+E+E
Sbjct: 466 PPAVLVRFLREHRSEWADYNIDAYLASTLKTSACSLTGLRPMRFSGSQIIIPLAHTVENE 525

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPII 597
           E LEV++LE      ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F D+ P+I
Sbjct: 526 EILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLI 584

Query: 598 PSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAF 657
            SGFR+IPLD   D  S  RTLDLAS+LEVG    +ASGD+S    + +SV+TIAFQF +
Sbjct: 585 SSGFRVIPLDMKTDGASSGRTLDLASSLEVGSATAQASGDASADDCNLRSVLTIAFQFPY 644

Query: 658 EMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQS 717
           E+HLQ++VA+MARQYVR I+++VQRV++A+SPS+ G NAG R   G PEA TLARW+CQS
Sbjct: 645 ELHLQDSVAAMARQYVRSIVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATLARWVCQS 704

Query: 718 Y 718
           Y
Sbjct: 705 Y 705


>gi|357146669|ref|XP_003574071.1| PREDICTED: homeobox-leucine zipper protein HOX9-like [Brachypodium
           distachyon]
          Length = 841

 Score =  942 bits (2435), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/700 (67%), Positives = 560/700 (80%), Gaps = 20/700 (2%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD+GKYVRYTPEQVEALER+Y ECPKP+S RRQQL+RECPILSNIE +QIKVWFQNRRCR
Sbjct: 27  MDSGKYVRYTPEQVEALERVYAECPKPTSTRRQQLLRECPILSNIEARQIKVWFQNRRCR 86

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           +KQRKE+SRLQAVNRKL+AMNKLLMEEN+RLQKQVSQLV+EN + +QQ QN +     DT
Sbjct: 87  DKQRKESSRLQAVNRKLSAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSL--ANDT 144

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
           SCES VT      TPQ    +PPRDAS PAGLL+IAEETLTEFLSKATGTAV+WV MPGM
Sbjct: 145 SCESNVT------TPQ----NPPRDASNPAGLLTIAEETLTEFLSKATGTAVDWVPMPGM 194

Query: 201 KPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTG 260
           KPGPDS GIVAISHGC GVAARACGLV L+PT++ EILKDRPSW+RDCRS+EV   LP G
Sbjct: 195 KPGPDSFGIVAISHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTQLPAG 254

Query: 261 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHF 320
           + GTIEL+YMQ+YAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ +  GPS   A  F
Sbjct: 255 NGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQF 314

Query: 321 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH 380
           VRAEMLPSGYL+RPC+GGGSI+H+VDH+DLE WSVPEVLRPLYESS ++AQK T AALRH
Sbjct: 315 VRAEMLPSGYLVRPCDGGGSIVHMVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRH 374

Query: 381 LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
           +RQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DGI+DV + 
Sbjct: 375 IRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIA 434

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSID 500
            N   SK +    +  + F S    V+CAKASMLLQ VPPA+L+RFLREHRSEWAD + D
Sbjct: 435 CN---SKKIRSNTAAPSAFES-PGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFD 490

Query: 501 AYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           AYSA+A+K   CSLP  R   F G Q+I+PLAHT+E+EE LEV++LE  A   ++ ++  
Sbjct: 491 AYSASALKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQA--LDEGLLSR 548

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTL 619
           DI LLQ C+G+DE ++G+C +LVFAPID  F DDAP+I SGFR+IPLD   D     RTL
Sbjct: 549 DIHLLQFCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGTPTGRTL 608

Query: 620 DLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIAS 679
           DLAS+LEVG T  +A G++S    + +SV+TIAFQF +EMHLQ+ VA+MARQYVR I+++
Sbjct: 609 DLASSLEVGSTTLQAPGNTSLDDSNLRSVLTIAFQFPYEMHLQDTVATMARQYVRSIVSA 668

Query: 680 VQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           VQRV++A+SPSR G NA  +   G PEA TLARWICQSY+
Sbjct: 669 VQRVSMAISPSRSGLNAEQKIISGFPEAATLARWICQSYQ 708


>gi|60327621|gb|AAX19050.1| class III HD-Zip protein 1 [Populus trichocarpa]
          Length = 855

 Score =  941 bits (2433), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/720 (66%), Positives = 560/720 (77%), Gaps = 32/720 (4%)

Query: 10  RDSRDSGG-QKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           R+S  SG   K + DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPIL+NIEP
Sbjct: 10  RESSGSGSLNKHLTDNGKYVRYTSEQVEALERVYAECPKPSSLRRQQLIRECPILANIEP 69

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQ 128
           KQIKVWFQNRRCREKQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN F +Q
Sbjct: 70  KQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMQQ 129

Query: 129 QTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDA-SPAGLLSIAEETLTEFLSKA 187
           Q Q A   A       S VT+ QH L          RDA +PAGLLS+AEETL EFLSKA
Sbjct: 130 QLQTAPAAADASCD--SAVTTPQHSL----------RDANNPAGLLSLAEETLAEFLSKA 177

Query: 188 TGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD 247
           TGTAV+WVQMPGMKPGPDS+GI AIS  C+GVAARACGLV L+PT++AEILKDR SW+RD
Sbjct: 178 TGTAVDWVQMPGMKPGPDSVGIFAISQRCSGVAARACGLVSLEPTKLAEILKDRQSWFRD 237

Query: 248 CRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN 307
           CR++EV  V P G+ GTIELLY Q+YAPTTLAPARDFW LRYT  LE+GSLVVCERSL+ 
Sbjct: 238 CRNLEVFTVFPAGNGGTIELLYSQIYAPTTLAPARDFWTLRYTINLENGSLVVCERSLSG 297

Query: 308 TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 367
           +  GP+   A  FVRAEMLPSGYLIRPCEGGGSIIHIVDH++L+ WSVPEVLRPLYESS 
Sbjct: 298 SGAGPNAAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSK 357

Query: 368 LIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
            +AQK T+ ALRH+RQI+ E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS
Sbjct: 358 AVAQKVTITALRHVRQIAHETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWS 417

Query: 428 MLESDGIDDVTVHVNSSPSKMMGVQ----LSYVNGFPSMSNAVLCAKASMLLQDVPPAIL 483
           ++ SDG +DV + VN++ + +        LS++ G       +LCAKASMLLQ+VPPA+L
Sbjct: 418 LMNSDGAEDVIIAVNTTKNLISANNPAHSLSFLGG-------ILCAKASMLLQNVPPAVL 470

Query: 484 LRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEV 542
           +RFLREHRSEWAD S+DAYSAA++KAG  + P  R+  F G Q+I+PL HTIE EE LEV
Sbjct: 471 VRFLREHRSEWADFSVDAYSAASLKAGSYAYPGMRSMRFTGSQIIMPLGHTIEQEELLEV 530

Query: 543 IKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFR 602
           I+LE  +  +ED  +  DI LLQ+CSG+DENAVG C+ELVFAPID  F DDAP++PSGFR
Sbjct: 531 IRLEGHSFAQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLLPSGFR 590

Query: 603 IIPLDS----GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFE 658
           +IPL+S     ++  + NRTLDL S+LEVGP  N AS D S+ C   +SV+TIAFQF FE
Sbjct: 591 VIPLESKTKDAQEALTTNRTLDLTSSLEVGPVTNHASVDGSS-C-HLRSVLTIAFQFPFE 648

Query: 659 MHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
            +LQ+NVA+MARQYVR +I+SVQRVA A+SPS      G +   GSPEA TLA WICQSY
Sbjct: 649 SNLQDNVATMARQYVRSVISSVQRVATAISPSGLNPALGPKLSAGSPEALTLAHWICQSY 708


>gi|109729905|tpg|DAA05766.1| TPA_inf: class III HD-Zip protein REV1 [Lotus japonicus]
          Length = 841

 Score =  941 bits (2433), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/723 (64%), Positives = 559/723 (77%), Gaps = 31/723 (4%)

Query: 13  RDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 72
           R+S   + +  +GKYVRYT  QVEALER+Y ECPKPSS+RRQQLIRECP+L+N+EPKQIK
Sbjct: 9   RESSIDRHLDSSGKYVRYTAGQVEALERVYTECPKPSSLRRQQLIRECPVLANVEPKQIK 68

Query: 73  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
           VWFQNRRCREKQRKEASRLQAVNRKL AMNKLLMEENDRLQKQVSQLV EN F RQQ Q 
Sbjct: 69  VWFQNRRCREKQRKEASRLQAVNRKLNAMNKLLMEENDRLQKQVSQLVCENGFMRQQLQA 128

Query: 133 AATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDA-SPAGLLSIAEETLTEFLSKATGTA 191
            +   TTD + +SV T+ ++ +          RDA SPAG LSIAEETL EFLSKATGTA
Sbjct: 129 PSAAGTTDGNGDSVATTSRNSM----------RDANSPAGFLSIAEETLAEFLSKATGTA 178

Query: 192 VEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV 251
           V+WVQ+PGMKPGPDS+GI  IS  C+GVAARACGLV L+P +VAEILKDR SW+RDCRS+
Sbjct: 179 VDWVQLPGMKPGPDSVGIFTISQSCSGVAARACGLVSLEPNKVAEILKDRLSWFRDCRSL 238

Query: 252 EVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 311
           EV  + P G+ GTIEL+Y Q YAP TL+PARDFW LRYT+ LE+GSLVVCERSL+ +  G
Sbjct: 239 EVFTMFPAGNGGTIELVYTQTYAPMTLSPARDFWTLRYTTTLENGSLVVCERSLSGSGAG 298

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
           P+   A  FVRAEMLPSGYLIRPCEGGGSIIHIVDH++L+ WSVPEVLRPLYESS ++AQ
Sbjct: 299 PNAAAAHQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSKVVAQ 358

Query: 372 KTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLES 431
           + T+AALR++RQI+QE S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS+L  
Sbjct: 359 RMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSVLNC 418

Query: 432 DGIDDVTVHVNS----SPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL 487
           DG +DV + VNS    S +      L++  G       VLCAKASMLLQ++PPA+L+RFL
Sbjct: 419 DGAEDVIISVNSTKNLSGTSNPASSLTFAGG-------VLCAKASMLLQNIPPAVLVRFL 471

Query: 488 REHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLE 546
           REHRSEWAD ++DAYSAA++KAG  + P  R   F G Q+I+PL HTIEHEE LEVI+LE
Sbjct: 472 REHRSEWADFNVDAYSAASLKAGSYAYPGMRPMRFTGNQIIMPLGHTIEHEEMLEVIRLE 531

Query: 547 NMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPL 606
             +  +ED     D+ LLQLCSG+DE+AVG C EL+FAPID  F DDAP++PSGFRIIPL
Sbjct: 532 GHSLAQEDAFASRDVHLLQLCSGIDEDAVGACCELIFAPIDEMFPDDAPLVPSGFRIIPL 591

Query: 607 DS----GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQ 662
           DS     KDT + N+TL+L S LEVG + N  +GD+S+ C + +SV+TIAFQF FE  LQ
Sbjct: 592 DSKPGDKKDTMTTNKTLNLTSGLEVGASTNHTAGDASS-CHNNRSVLTIAFQFPFESSLQ 650

Query: 663 ENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           +NVA MARQYVR +I+SVQ V++A+SPS     AG +   GSPEA TLARW+CQSY    
Sbjct: 651 DNVAVMARQYVRSVISSVQTVSMAISPSGTNPAAGAKLSVGSPEALTLARWVCQSYS--- 707

Query: 723 YFL 725
           Y+L
Sbjct: 708 YYL 710


>gi|109729909|tpg|DAA05768.1| TPA_inf: class III HD-Zip protein CNA2 [Medicago truncatula]
          Length = 518

 Score =  938 bits (2425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/522 (85%), Positives = 482/522 (92%), Gaps = 9/522 (1%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           G K +MDNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEP+QIKVWFQ
Sbjct: 6   GNKHLMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPRQIKVWFQ 65

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKE+ RLQ VNRKLTAMNKLLMEENDRLQKQVS LVYEN +FRQ TQNA   
Sbjct: 66  NRRCREKQRKESFRLQGVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRQNTQNA--- 122

Query: 137 ATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 196
            T DTSC+SVVTSGQH++T     QHPPRDASPAGLLSIAEETL EFLSKATGTAVEWVQ
Sbjct: 123 -TKDTSCDSVVTSGQHNMT----SQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQ 177

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKDRP W+RDCR+V++VNV
Sbjct: 178 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPLWFRDCRAVDIVNV 237

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           LPT + GTIELLYMQLYAPTTLAPARDFWLLRYTSV+EDGSL+ CERSL NTQNGPSMP 
Sbjct: 238 LPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVVEDGSLI-CERSLKNTQNGPSMPP 296

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
            PHFVRA+MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYES  ++AQKTTMA
Sbjct: 297 VPHFVRADMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESPMVLAQKTTMA 356

Query: 377 ALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
           ALRHLRQIS EVSQP+VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW+M+ +DG+DD
Sbjct: 357 ALRHLRQISHEVSQPNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTMMGNDGVDD 416

Query: 437 VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWAD 496
           VT+ VNSSP K+MG+ LS+ NGFPS+SNAVLCAKASMLLQ+VPPAILLRFLREHRSEWAD
Sbjct: 417 VTILVNSSPDKLMGLNLSFGNGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 476

Query: 497 SSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE 538
            ++DAY+AAA+K GPCSL   R GN+GGQVILPL HTIEHEE
Sbjct: 477 HNMDAYTAAAIKVGPCSLTGSRVGNYGGQVILPLTHTIEHEE 518


>gi|37694044|gb|AAQ98963.1| homeodomain leucine-zipper protein Hox9 [Oryza sativa Japonica
           Group]
          Length = 840

 Score =  938 bits (2425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/703 (66%), Positives = 559/703 (79%), Gaps = 19/703 (2%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K  MD+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNR
Sbjct: 22  KAGMDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNR 81

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCR+KQRKEASRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + +QQ QN +    
Sbjct: 82  RCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSL--G 139

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQM 197
            DTSCES VT+           Q+P RDAS P+GLL+IAEETLTEFLSKATGTAV+WV M
Sbjct: 140 NDTSCESNVTT----------LQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPM 189

Query: 198 PGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVL 257
           PGMKPGPDS GIVA+SHGC GVAARACGLV L+PT++ EILKDRPSW+RDCRS+EV  + 
Sbjct: 190 PGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMF 249

Query: 258 PTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQA 317
           P G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ +  GPS   A
Sbjct: 250 PAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASA 309

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
             FVRAEML SGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS ++AQK T AA
Sbjct: 310 QQFVRAEMLTSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAA 369

Query: 378 LRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           LRH+RQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DGI+DV
Sbjct: 370 LRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDV 429

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADS 497
            +  N+   +      +  N F +    V+CAKASMLLQ VPPA+L+RFLREHRSEWAD 
Sbjct: 430 IIACNARKVRNTS---TSANAFVT-PGGVICAKASMLLQSVPPAVLVRFLREHRSEWADY 485

Query: 498 SIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
           + DAYSA+++K   CSLP  R   F G Q+I+PLAHT+E+EE LEV++LE  A   +D +
Sbjct: 486 NFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGL 545

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPN 616
           M  DI LLQLC+G+DE ++G+C +LV APID  F DDA +I SGFR+IPL+   D     
Sbjct: 546 MSRDIHLLQLCTGIDEKSMGSCFQLVSAPIDELFPDDAQLISSGFRVIPLNMKTDGTPAG 605

Query: 617 RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGI 676
           RTLDLAS+LEVG T  + +GD+S    + +SV+TIAFQF +EMHLQ++VA+MARQYVR I
Sbjct: 606 RTLDLASSLEVGSTA-QPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSI 664

Query: 677 IASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           ++SVQRV++A+SPSR G NAG +   G PEA TLARWICQSY+
Sbjct: 665 VSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQ 707


>gi|125542090|gb|EAY88229.1| hypothetical protein OsI_09681 [Oryza sativa Indica Group]
          Length = 857

 Score =  937 bits (2423), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/739 (64%), Positives = 567/739 (76%), Gaps = 38/739 (5%)

Query: 2   MAVSSGGSRDSRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE 59
           MA +      S D GG   +  MD+GKYVRYTPEQVEALER+Y +CPKP+S RRQQL+RE
Sbjct: 1   MAAAVAMRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRE 60

Query: 60  CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           CPIL+NIEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQL
Sbjct: 61  CPILANIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQL 120

Query: 120 VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEE 178
           V+EN   RQQ QN  T    DTSCES VT      TPQ    +P RDAS P+GLLSIAEE
Sbjct: 121 VHENAHMRQQLQN--TPLANDTSCESNVT------TPQ----NPLRDASNPSGLLSIAEE 168

Query: 179 TLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEIL 238
           TLTEFLSKATGTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+V EIL
Sbjct: 169 TLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEIL 228

Query: 239 KDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL 298
           KDRPSW+RDCR++EV  ++P G+ GT+EL+Y QLYAPTTL PARDFW LRYT+ +EDGSL
Sbjct: 229 KDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSL 288

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
           VVCERSL+ +  GPS   A  +VRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEV
Sbjct: 289 VVCERSLSGSGGGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEV 348

Query: 359 LRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEAL 418
           LRPLYESS ++AQK T AALRH+RQI+QE S   V   GR+PA LR  SQRLSRGFN+A+
Sbjct: 349 LRPLYESSRVVAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAI 408

Query: 419 NGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDV 478
           +GF D+GWS++  DG++DV +  NS+             G P     ++CAKASMLLQ V
Sbjct: 409 SGFNDDGWSIMGGDGVEDVVIACNSTKKIRSNSNAGIAFGAP---GGIICAKASMLLQSV 465

Query: 479 PPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHE 537
           PPA+L+RFLREHRSEWAD +IDAY A+ +K   CSLP  R   F G Q+I+PLAHT+E+E
Sbjct: 466 PPAVLVRFLREHRSEWADYNIDAYLASTLKTSACSLPGLRPMRFSGSQIIIPLAHTVENE 525

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPII 597
           E LEV++LE      ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F D+ P+I
Sbjct: 526 EILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLI 584

Query: 598 PSGFRIIPLDS---------------GK---DTPSPNRTLDLASALEVGPTGNKASGDSS 639
            SGFR+IPLD                GK   D  S  RTLDLAS+LEVG    +ASGD+S
Sbjct: 585 SSGFRVIPLDMKTLELIEAFGFKYSLGKIKQDGASSGRTLDLASSLEVGSATAQASGDAS 644

Query: 640 TQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLR 699
               + +SV+TIAFQF +E+HLQ++VA+MARQYVR I+++VQRV++A+SPS+ G NAG R
Sbjct: 645 ADDCNLRSVLTIAFQFPYELHLQDSVAAMARQYVRSIVSAVQRVSMAISPSQTGLNAGQR 704

Query: 700 PPPGSPEAHTLARWICQSY 718
              G PEA TLARW+CQSY
Sbjct: 705 IISGFPEAATLARWVCQSY 723


>gi|89514841|gb|ABD75295.1| class III homeodomain-leucine zipper protein C3HDZ1 [Marchantia
           polymorpha]
          Length = 860

 Score =  937 bits (2423), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/720 (65%), Positives = 564/720 (78%), Gaps = 24/720 (3%)

Query: 19  KMIMD-NGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQN 77
           + +MD +GKYVRYT EQVEALER+Y+ECPKPSS+RRQQLI++CPIL+NIEPKQIKVWFQN
Sbjct: 9   RSVMDASGKYVRYTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEPKQIKVWFQN 68

Query: 78  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQT------- 130
           RRCREKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN + RQ T       
Sbjct: 69  RRCREKQRKEATRLLSVNAKLTALNKLLMEENERLSKHTSQLAIENQYLRQHTSSDRNLK 128

Query: 131 -----QNAATLATTDTSCESVVTSG-QHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFL 184
                   A +AT DTS ESVVT G Q H TPQ    HPPRDASPAGLL+IAEETLTEFL
Sbjct: 129 PNRRLHEQAGMATPDTSSESVVTGGLQRHPTPQ----HPPRDASPAGLLAIAEETLTEFL 184

Query: 185 SKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSW 244
           +KATGTA++W+QMPGMKPGPDSIGIVAISHGC GVAARACGLVGL+PT+VA++LKDRP+W
Sbjct: 185 AKATGTAIDWIQMPGMKPGPDSIGIVAISHGCAGVAARACGLVGLEPTKVADVLKDRPAW 244

Query: 245 YRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERS 304
            RDCR ++V+   PTG+ GT+EL+Y Q+YAPTTLAPARDF  LRYTS LEDG+LV+CERS
Sbjct: 245 LRDCRRLDVLGAFPTGNGGTVELIYTQMYAPTTLAPARDFCTLRYTSFLEDGNLVICERS 304

Query: 305 LNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYE 364
           L+     P+MP    FVRAEMLPSGYLIRPCEGGG IIHIVDHMDLEPWSVPEVLRPLYE
Sbjct: 305 LSGAHGAPTMPPVQFFVRAEMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVLRPLYE 364

Query: 365 SSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDE 424
           SS ++AQK T+ ALRHLR+++QE+    V G  ++PA LRALSQRL+RGFNEA+NGF D+
Sbjct: 365 SSAVLAQKMTIGALRHLRRLAQEIPGEVVLGSDQQPAVLRALSQRLARGFNEAVNGFADD 424

Query: 425 GWSMLESDGIDDVTVHVNSSP-SKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAIL 483
           GW+ L SDG+DDV+V VN +P SK  G   +  +   S+   +LCAKASMLLQ+VPPA+L
Sbjct: 425 GWTTLPSDGMDDVSVVVNPNPNSKQFGGGPNATDRLCSIGGGILCAKASMLLQNVPPALL 484

Query: 484 LRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVI 543
           +RFLREHRSEWAD  IDA +AAA+++        R    GGQ+ LPLAH +E EEFLEV+
Sbjct: 485 IRFLREHRSEWADCEIDADAAAALRSTNYVGSESRGSLCGGQLPLPLAHAVEQEEFLEVV 544

Query: 544 KLENMAHYREDMIMP-SDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFR 602
           KLE  +  ++  ++  SD FLLQLCSGVDENAVG CA+LVFAP+D + +DD P++ SGFR
Sbjct: 545 KLEGHSPTQDGGVLNRSDSFLLQLCSGVDENAVGACAQLVFAPVDVAVTDDVPLLASGFR 604

Query: 603 IIPLDSG-KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHL 661
           +IPLDSG  D    +RTLDL S LE G +  +  GDS       +SV+TIAFQFAFE+H 
Sbjct: 605 VIPLDSGIVDGYGLSRTLDLTSTLE-GGSEARLVGDSGASACHLRSVLTIAFQFAFEVHT 663

Query: 662 QENVASMARQYVRGIIASVQRVALALSPSRFGSNAG--LRPPPGSPEAHTLARWICQSYR 719
           +++VA+MARQYVR ++ASVQRVA+AL+PSR GS+ G    PPP +PEA  LAR + QSYR
Sbjct: 664 RDSVAAMARQYVRTVVASVQRVAMALAPSRLGSHLGGTRHPPPATPEALVLARRVLQSYR 723


>gi|24431605|gb|AAN61485.1| Putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|125584645|gb|EAZ25309.1| hypothetical protein OsJ_09120 [Oryza sativa Japonica Group]
          Length = 857

 Score =  935 bits (2416), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/739 (63%), Positives = 566/739 (76%), Gaps = 38/739 (5%)

Query: 2   MAVSSGGSRDSRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE 59
           MA +      S D GG   +  MD+GKYVRYTPEQVEALER+Y +CPKP+S RRQQL+RE
Sbjct: 1   MAAAVAMRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRE 60

Query: 60  CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           CPIL+NIEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQL
Sbjct: 61  CPILANIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQL 120

Query: 120 VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEE 178
           V+EN   RQQ QN  T    DTSCES VT      TPQ    +P RDAS P+GLLSIAEE
Sbjct: 121 VHENAHMRQQLQN--TPLANDTSCESNVT------TPQ----NPLRDASNPSGLLSIAEE 168

Query: 179 TLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEIL 238
           TLTEFLSKATGTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+V EIL
Sbjct: 169 TLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEIL 228

Query: 239 KDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL 298
           KDRPSW+RDCR++EV  ++P G+ GT+EL+Y QLYAPTTL PARDFW LRYT+ +EDGSL
Sbjct: 229 KDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSL 288

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
           VVCERSL+ +  GPS   A  +VRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEV
Sbjct: 289 VVCERSLSGSGGGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEV 348

Query: 359 LRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEAL 418
           LRPLYESS ++AQK T AALRH+RQI+QE S   V   GR+PA LR  SQRLSRGFN+A+
Sbjct: 349 LRPLYESSRVVAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAI 408

Query: 419 NGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDV 478
           +GF D+GWS++  DG++DV +  NS+             G P     ++CAKASMLLQ V
Sbjct: 409 SGFNDDGWSIMGGDGVEDVVIACNSTKKIRSNSNAGIAFGAP---GGIICAKASMLLQSV 465

Query: 479 PPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHE 537
           PPA+L+RFLREHRSEWAD +IDAY A+ +K   CSL   R   F G Q+I+PLAHT+E+E
Sbjct: 466 PPAVLVRFLREHRSEWADYNIDAYLASTLKTSACSLTGLRPMRFSGSQIIIPLAHTVENE 525

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPII 597
           E LEV++LE      ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F D+ P+I
Sbjct: 526 EILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLI 584

Query: 598 PSGFRIIPLDS---------------GK---DTPSPNRTLDLASALEVGPTGNKASGDSS 639
            SGFR+IPLD                GK   D  S  RTLDLAS+LEVG    +ASGD+S
Sbjct: 585 SSGFRVIPLDMKTLELIEAFGFKYSLGKIKQDGASSGRTLDLASSLEVGSATAQASGDAS 644

Query: 640 TQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLR 699
               + +SV+TIAFQF +E+HLQ++VA+MARQYVR I+++VQRV++A+SPS+ G NAG R
Sbjct: 645 ADDCNLRSVLTIAFQFPYELHLQDSVAAMARQYVRSIVSAVQRVSMAISPSQTGLNAGQR 704

Query: 700 PPPGSPEAHTLARWICQSY 718
              G PEA TLARW+CQSY
Sbjct: 705 IISGFPEAATLARWVCQSY 723


>gi|15220758|ref|NP_174337.1| homeobox-leucine zipper protein ATHB-9 [Arabidopsis thaliana]
 gi|75096987|sp|O04292.1|ATBH9_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-9; AltName:
           Full=HD-ZIP protein ATHB-9; AltName: Full=Homeodomain
           transcription factor ATHB-9; AltName: Full=Protein
           PHAVOLUTA
 gi|2145358|emb|CAA71854.1| HD-Zip protein [Arabidopsis thaliana]
 gi|20069421|emb|CAD29544.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|110741482|dbj|BAE98697.1| HD-Zip protein [Arabidopsis thaliana]
 gi|332193111|gb|AEE31232.1| homeobox-leucine zipper protein ATHB-9 [Arabidopsis thaliana]
          Length = 841

 Score =  934 bits (2415), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/724 (64%), Positives = 557/724 (76%), Gaps = 27/724 (3%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           MMA  S   RDS D G      D+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIREC
Sbjct: 1   MMAHHSMDDRDSPDKG-----FDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIREC 55

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           PIL NIEP+QIKVWFQNRRCREKQRKE++RLQ VNRKL+AMNKLLMEENDRLQKQVS LV
Sbjct: 56  PILCNIEPRQIKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLV 115

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEET 179
           YEN F + +   A+   TTD SCESVV SGQ        HQHP RD + PA LLSIAEET
Sbjct: 116 YENGFMKHRIHTASG-TTTDNSCESVVVSGQQRQQQNPTHQHPQRDVNNPANLLSIAEET 174

Query: 180 LTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILK 239
           L EFL KATGTAV+WVQM GMKPGPDSIGIVA+S  C+G+AARACGLV L+P +VAEILK
Sbjct: 175 LAEFLCKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILK 234

Query: 240 DRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLV 299
           DRPSW+RDCR VE +NV+PTG+ GTIEL+  Q+YAPTTLA ARDFW LRY++ LEDGS V
Sbjct: 235 DRPSWFRDCRCVETLNVIPTGNGGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYV 294

Query: 300 VCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL 359
           VCERSL +   GP+ P +  FVRA+ML SG+LIRPC+GGGSIIHIVDH+DL+  SVPEVL
Sbjct: 295 VCERSLTSATGGPNGPLSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVL 354

Query: 360 RPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALN 419
           RPLYESS ++AQK T+AALRH+RQI+QE S       GR+PA LR  SQRL RGFN+A+N
Sbjct: 355 RPLYESSKILAQKMTVAALRHVRQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVN 414

Query: 420 GFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGF-PSMSNAVLCAKASMLLQDV 478
           GF D+GWS + SDG +D+T+ +NSS +K  G Q  Y + F PS  + VLCAKASMLLQ+V
Sbjct: 415 GFVDDGWSPMSSDGGEDITIMINSSSAKFAGSQ--YGSSFLPSFGSGVLCAKASMLLQNV 472

Query: 479 PPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHE 537
           PP +L+RFLREHR+EWAD  +DAYSAA+++A P ++P  R G F   QVILPLA T+EHE
Sbjct: 473 PPLVLIRFLREHRAEWADYGVDAYSAASLRATPYAVPCVRTGGFPSNQVILPLAQTLEHE 532

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPII 597
           EFLEV++L   A+  EDM +  D++LLQLCSGVDEN VG CA+LVFAPID SF+DDAP++
Sbjct: 533 EFLEVVRLGGHAYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLL 592

Query: 598 PSGFRIIPLDSG---KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQ 654
           PSGFR+IPLD      D  S +RT DLAS+L+          DS T   +++ V+TIAFQ
Sbjct: 593 PSGFRVIPLDQKTNPNDHQSASRTRDLASSLD-----GSTKTDSET---NSRLVLTIAFQ 644

Query: 655 FAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWI 714
           F F+ H ++NVA+MARQYVR ++ S+QRVALA++P       G    P SPEA TL RWI
Sbjct: 645 FTFDNHSRDNVATMARQYVRNVVGSIQRVALAITP-----RPGSMQLPTSPEALTLVRWI 699

Query: 715 CQSY 718
            +SY
Sbjct: 700 TRSY 703


>gi|297793627|ref|XP_002864698.1| hypothetical protein ARALYDRAFT_496218 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310533|gb|EFH40957.1| hypothetical protein ARALYDRAFT_496218 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 844

 Score =  934 bits (2413), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/724 (63%), Positives = 563/724 (77%), Gaps = 26/724 (3%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M ++    R+       + +  +GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIREC 
Sbjct: 1   MEMAVANHRERSSDSMNRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECS 60

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           IL+NIEPKQIKVWFQNRRCR+KQRKEASRLQ+VNRKL+AMNKLLMEENDRLQKQVSQLV 
Sbjct: 61  ILANIEPKQIKVWFQNRRCRDKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVC 120

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETL 180
           EN + +QQ     T+   D SCESVVT+ QH L          RDAS PAGL+SIAEETL
Sbjct: 121 ENGYMKQQL---TTVVCNDPSCESVVTTPQHSL----------RDASSPAGLISIAEETL 167

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
            EFLSKATGTAV+WVQMPGMKPGPDS+GI AIS  C+GVAARACGLV L+P ++AEILKD
Sbjct: 168 AEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQRCSGVAARACGLVSLEPMKIAEILKD 227

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSW+RDCRS+EV  + P G+ GTIEL+YMQ YAPTTLAPARDFW LRYT+ L++GS VV
Sbjct: 228 RPSWFRDCRSLEVFTLFPAGNGGTIELVYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVV 287

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSL+ +  GP+   A  FVRAEML SGYLIRPC+GGGSIIHIVDH++LE WSVP+VLR
Sbjct: 288 CERSLSGSGAGPNAASASQFVRAEMLSSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLR 347

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESS ++AQK T++ALR++RQ++QE +   V G GR+PA LR  SQRLSRGFN+A+NG
Sbjct: 348 PLYESSKVVAQKMTISALRYIRQLAQETNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNG 407

Query: 421 FTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
           F D+GWS +  DG +D+ V +NS+        L+ ++   S    VLCAKASMLLQ+VPP
Sbjct: 408 FGDDGWSTMHCDGAEDIIVAINSTK------HLNNISNSLSFLGGVLCAKASMLLQNVPP 461

Query: 481 AILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEF 539
           A+L+RFLREHRSEWAD ++DAYSAA +KAG  + P  R   F G Q+I+PL HTIEHEE 
Sbjct: 462 AVLIRFLREHRSEWADFNVDAYSAATLKAGTFAYPGMRPTRFTGSQIIMPLGHTIEHEEM 521

Query: 540 LEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPS 599
           LEV++LE  +  +ED  M  D+ LLQ+C+G+DENAVG C+EL+FAPI+  F DDAP++PS
Sbjct: 522 LEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSELIFAPINEMFPDDAPLVPS 581

Query: 600 GFRIIPLDS----GKDTPSPN-RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQ 654
           GFR+IP+D+     +D  + N RTLDL S+LEVGP+   ASG+SS+   S++ ++TIAFQ
Sbjct: 582 GFRVIPVDAKTGDAQDLLTANHRTLDLTSSLEVGPSPENASGNSSSSSSSSRCILTIAFQ 641

Query: 655 FAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWI 714
           F FE +LQENVA MA QYVR +I+SVQRVA+A+SPS    + G +  PGSPEA TLA+WI
Sbjct: 642 FPFENNLQENVAGMACQYVRSVISSVQRVAMAVSPSGISPSLGSKLSPGSPEAVTLAQWI 701

Query: 715 CQSY 718
            QSY
Sbjct: 702 SQSY 705


>gi|90110436|gb|ABD90520.1| class III homeodomain-leucine zipper [Marchantia polymorpha]
          Length = 860

 Score =  933 bits (2412), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/720 (65%), Positives = 562/720 (78%), Gaps = 24/720 (3%)

Query: 19  KMIMD-NGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQN 77
           + +MD +GKYVRYT EQVEALER+Y+ECPKPSS+RRQQLI++CPIL+NIEPKQIKVWFQN
Sbjct: 9   RSVMDASGKYVRYTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEPKQIKVWFQN 68

Query: 78  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQT------- 130
           RRCREKQRKEA+RL +VN K TA+NKLLMEEN+RL K  SQL  EN + RQ T       
Sbjct: 69  RRCREKQRKEATRLLSVNAKPTALNKLLMEENERLSKHTSQLAIENQYLRQHTSSERNLK 128

Query: 131 -----QNAATLATTDTSCESVVTSG-QHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFL 184
                   A +AT DTS ESVVT G Q H TPQ    HPPRDASPAGLL+IAEETLTEFL
Sbjct: 129 PSRRLHEQAGMATPDTSSESVVTGGLQRHPTPQ----HPPRDASPAGLLAIAEETLTEFL 184

Query: 185 SKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSW 244
           +KATGTA++W+QMPGMKPGPDSIGIVAISHGC GVAARACGLVGL+PT+VA++LKDRP+W
Sbjct: 185 AKATGTAIDWIQMPGMKPGPDSIGIVAISHGCAGVAARACGLVGLEPTKVADVLKDRPAW 244

Query: 245 YRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERS 304
            RDCR ++V+   PTG+ GT+EL+Y Q+YAPTTLAPARDF  LRYTS LEDG+LV+CERS
Sbjct: 245 LRDCRRLDVLGAFPTGNGGTVELIYTQMYAPTTLAPARDFCALRYTSFLEDGNLVICERS 304

Query: 305 LNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYE 364
           L+     P+MP    FVRAEMLPSGYLIRPCEGGG IIHIVDHMDLEPWSVPEVLRPLYE
Sbjct: 305 LSGAHGAPTMPPVQFFVRAEMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVLRPLYE 364

Query: 365 SSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDE 424
           SS ++AQK TM ALRHLR+++QE+    V G  ++PA LRALSQRL+RGFNEA+NGF D+
Sbjct: 365 SSAVLAQKMTMGALRHLRRLAQEIPGEVVLGSDQQPAVLRALSQRLARGFNEAVNGFADD 424

Query: 425 GWSMLESDGIDDVTVHVNSSP-SKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAIL 483
           GW+ L SDG+DDV+V VN +P SK  G   +  +   S+   +LCAKASMLLQ+VPPA+L
Sbjct: 425 GWTTLPSDGMDDVSVVVNPNPNSKQFGGGPNATDRLCSIGGGILCAKASMLLQNVPPALL 484

Query: 484 LRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVI 543
           +RFLREHRSEWAD  IDA +AAA+++        R    GGQ+ LPLAH +E EEFLEV+
Sbjct: 485 IRFLREHRSEWADCEIDADAAAALRSTNYVGSESRGSLCGGQLPLPLAHAVEQEEFLEVV 544

Query: 544 KLENMAHYREDMIMP-SDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFR 602
           KLE  +  ++  ++  SD FLLQLCSGVDENAVG CA+LVFAP+D + +DD P++ SGFR
Sbjct: 545 KLEGHSPTQDGGVLNRSDSFLLQLCSGVDENAVGACAQLVFAPVDVAVTDDVPLLASGFR 604

Query: 603 IIPLDSG-KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHL 661
           +IPLDSG  D    +RTLDL S LE G +  +  GDS       +SV+TIAFQFAFE++ 
Sbjct: 605 VIPLDSGIVDGYGLSRTLDLTSTLE-GGSEARLVGDSGASACHLRSVLTIAFQFAFEVYT 663

Query: 662 QENVASMARQYVRGIIASVQRVALALSPSRFGSNAG--LRPPPGSPEAHTLARWICQSYR 719
            ++VA+MARQYVR ++ASVQRVA+AL+PSR GS+ G    PPP +PEA  LAR + QSYR
Sbjct: 664 GDSVAAMARQYVRTVVASVQRVAMALAPSRLGSHLGGTRHPPPATPEALVLARRVLQSYR 723


>gi|326526073|dbj|BAJ93213.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 840

 Score =  933 bits (2412), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/698 (67%), Positives = 561/698 (80%), Gaps = 22/698 (3%)

Query: 24  NGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 83
           +GKYVRYTPEQVEALER+Y ECPKP+S RRQQL+RECPILSNIEP+QIKVWFQNRRCR+K
Sbjct: 30  SGKYVRYTPEQVEALERVYAECPKPTSTRRQQLLRECPILSNIEPRQIKVWFQNRRCRDK 89

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSC 143
           QRKE+SRLQAVNRKL+AMNKLLMEEN+RLQKQVSQLV+EN + +QQ QN +     DTSC
Sbjct: 90  QRKESSRLQAVNRKLSAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSL--ANDTSC 147

Query: 144 ESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKP 202
           ES VT      TP     +P RDAS PAGLL+IAEETLTEFLSKATGTAV+WV MPGMKP
Sbjct: 148 ESNVT------TPP----NPLRDASNPAGLLAIAEETLTEFLSKATGTAVDWVPMPGMKP 197

Query: 203 GPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSS 262
           GPDS GIVAISHGC GVAARACGLV L+PT++ EILKDRPSW+RDCRS+EV  +LP G+ 
Sbjct: 198 GPDSFGIVAISHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMLPAGNG 257

Query: 263 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVR 322
           GTIEL+YMQ+YAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ +  GPS   A  FVR
Sbjct: 258 GTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVR 317

Query: 323 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLR 382
           AEMLPSGYL+RPC+GGGSI+HIVDH+DLE WSVPEVLRPLYESS ++AQK T AALRH+R
Sbjct: 318 AEMLPSGYLVRPCDGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIR 377

Query: 383 QISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN 442
           QI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DGI+DV +  N
Sbjct: 378 QIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMAGDGIEDVIIACN 437

Query: 443 SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAY 502
              SK +    +  N F +    V+CAKASMLLQ+VPPA+L+RFLREHRSEWAD + DAY
Sbjct: 438 ---SKKIRSNNTAPNAFIA-PGGVICAKASMLLQNVPPAVLVRFLREHRSEWADYNFDAY 493

Query: 503 SAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDI 561
           SA+A+K+  CSLP  R   F G Q+I+PLAHT+E+EE LEV++LE  A   ++ ++  DI
Sbjct: 494 SASALKSSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQA--LDEGLLSRDI 551

Query: 562 FLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDL 621
            LLQ C+G+DE ++G+C +LVFAPID  F DDAP+I SGFR+IPLD   D     RTLDL
Sbjct: 552 HLLQFCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGAPTGRTLDL 611

Query: 622 ASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQ 681
           AS+LE G T  +ASG++   C + +SV+TIAFQF +EMHLQ++VA+MARQYVR I+++VQ
Sbjct: 612 ASSLEAGSTTLQASGNAD-DC-NLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSAVQ 669

Query: 682 RVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           RV++A+SPSR G NA  +   G PEA TLARWICQSYR
Sbjct: 670 RVSMAISPSRSGLNAEQKIISGFPEAATLARWICQSYR 707


>gi|312282957|dbj|BAJ34344.1| unnamed protein product [Thellungiella halophila]
          Length = 844

 Score =  932 bits (2410), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/716 (65%), Positives = 556/716 (77%), Gaps = 29/716 (4%)

Query: 10  RDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           RDS D G      D+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPIL NIEP+
Sbjct: 13  RDSPDKG-----FDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPR 67

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKE++RLQ VNRKL+AMNKLLMEENDRLQKQVS LVYEN F + +
Sbjct: 68  QIKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGFMKHR 127

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKAT 188
              A+   TTD SCESVV SGQ        HQHP RDA+ PAGLLSIAEETL EFL KAT
Sbjct: 128 IHTASG-TTTDNSCESVVVSGQQRQQQNPTHQHPQRDANNPAGLLSIAEETLAEFLCKAT 186

Query: 189 GTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDC 248
           GTAV+WVQM GMKPGPDSIGIVA+S  C+G+AARACGLV L+P +V EILKDRPSW+RDC
Sbjct: 187 GTAVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVVEILKDRPSWFRDC 246

Query: 249 RSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           R VE ++V+PTG+ GTIEL+  Q+YAPTTLA ARDFW LRY++ LEDGS VVCE+SL + 
Sbjct: 247 RCVETLSVIPTGNGGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCEKSLTSA 306

Query: 309 QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL 368
             GP+ P +  FVRA+ML SG+LIRPC+GGGSIIHIVDH+DL+  SVPEVLRPLYESS +
Sbjct: 307 TGGPNGPLSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKI 366

Query: 369 IAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
           +AQK T+AALRH+RQI+QE S       GR+PA LR  SQRL RGFN+A+NGF D+GWS 
Sbjct: 367 LAQKMTVAALRHVRQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFADDGWSP 426

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGF-PSMSNAVLCAKASMLLQDVPPAILLRFL 487
           + SDG +D+T+ +NSS +K  G Q  Y N F PS  + VLCAKASMLLQ+VPP +L+RFL
Sbjct: 427 MSSDGGEDITIMINSSSAKFAGSQ--YGNSFLPSFGSGVLCAKASMLLQNVPPLVLIRFL 484

Query: 488 REHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLE 546
           REHR+EWAD  +DAYSAA+++A P ++P  R G F   QVILPLA T+EHEEFLEV++L 
Sbjct: 485 REHRAEWADYGVDAYSAASLRATPFAVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLG 544

Query: 547 NMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPL 606
             A+  EDM +  D++LLQLCSGVDEN VG CA+LVFAPID SF+DDAP++PSGFR+IPL
Sbjct: 545 GHAYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPL 604

Query: 607 DSGKDTP----SPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQ 662
           +  K TP    S NRT DLAS+L+          DS T   +++ V+TIAFQF F+ H +
Sbjct: 605 EQ-KTTPSDHVSANRTRDLASSLD-----GSTKTDSET---NSRLVLTIAFQFTFDNHSR 655

Query: 663 ENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           +NVA+MARQYVR ++ S+QRVALA++P       G    P SPEA TL RWI +SY
Sbjct: 656 DNVATMARQYVRNVVGSIQRVALAITP-----RPGSMQLPTSPEALTLVRWISRSY 706


>gi|6634772|gb|AAF19752.1|AC009917_11 Strong similarity to gb|Y10922 HD-Zip protein from Arabidopsis
           thaliana, containing START PF|01852, bZIP transcription
           factor PF|00170, and homeobox PF|00046 domains. ESTs
           gb|F20019, gb|Z46707, gb|Z46706, gb|F20018 come from
           this gene [Arabidopsis thaliana]
          Length = 840

 Score =  932 bits (2410), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/723 (64%), Positives = 556/723 (76%), Gaps = 27/723 (3%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MA  S   RDS D G      D+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 1   MAHHSMDDRDSPDKG-----FDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECP 55

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           IL NIEP+QIKVWFQNRRCREKQRKE++RLQ VNRKL+AMNKLLMEENDRLQKQVS LVY
Sbjct: 56  ILCNIEPRQIKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVY 115

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETL 180
           EN F + +   A+   TTD SCESVV SGQ        HQHP RD + PA LLSIAEETL
Sbjct: 116 ENGFMKHRIHTASG-TTTDNSCESVVVSGQQRQQQNPTHQHPQRDVNNPANLLSIAEETL 174

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
            EFL KATGTAV+WVQM GMKPGPDSIGIVA+S  C+G+AARACGLV L+P +VAEILKD
Sbjct: 175 AEFLCKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKD 234

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSW+RDCR VE +NV+PTG+ GTIEL+  Q+YAPTTLA ARDFW LRY++ LEDGS VV
Sbjct: 235 RPSWFRDCRCVETLNVIPTGNGGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVV 294

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSL +   GP+ P +  FVRA+ML SG+LIRPC+GGGSIIHIVDH+DL+  SVPEVLR
Sbjct: 295 CERSLTSATGGPNGPLSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLR 354

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESS ++AQK T+AALRH+RQI+QE S       GR+PA LR  SQRL RGFN+A+NG
Sbjct: 355 PLYESSKILAQKMTVAALRHVRQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNG 414

Query: 421 FTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGF-PSMSNAVLCAKASMLLQDVP 479
           F D+GWS + SDG +D+T+ +NSS +K  G Q  Y + F PS  + VLCAKASMLLQ+VP
Sbjct: 415 FVDDGWSPMSSDGGEDITIMINSSSAKFAGSQ--YGSSFLPSFGSGVLCAKASMLLQNVP 472

Query: 480 PAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEE 538
           P +L+RFLREHR+EWAD  +DAYSAA+++A P ++P  R G F   QVILPLA T+EHEE
Sbjct: 473 PLVLIRFLREHRAEWADYGVDAYSAASLRATPYAVPCVRTGGFPSNQVILPLAQTLEHEE 532

Query: 539 FLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIP 598
           FLEV++L   A+  EDM +  D++LLQLCSGVDEN VG CA+LVFAPID SF+DDAP++P
Sbjct: 533 FLEVVRLGGHAYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLP 592

Query: 599 SGFRIIPLDSG---KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
           SGFR+IPLD      D  S +RT DLAS+L+          DS T   +++ V+TIAFQF
Sbjct: 593 SGFRVIPLDQKTNPNDHQSASRTRDLASSLD-----GSTKTDSET---NSRLVLTIAFQF 644

Query: 656 AFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWIC 715
            F+ H ++NVA+MARQYVR ++ S+QRVALA++P       G    P SPEA TL RWI 
Sbjct: 645 TFDNHSRDNVATMARQYVRNVVGSIQRVALAITP-----RPGSMQLPTSPEALTLVRWIT 699

Query: 716 QSY 718
           +SY
Sbjct: 700 RSY 702


>gi|45775302|gb|AAS77254.1| class III HD-Zip protein [Populus tremula x Populus alba]
          Length = 843

 Score =  931 bits (2406), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/720 (65%), Positives = 558/720 (77%), Gaps = 32/720 (4%)

Query: 10  RDSRDSGG-QKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           R+S  SG   K + DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPIL+NIEP
Sbjct: 10  RESSSSGSLNKHLADNGKYVRYTSEQVEALERVYAECPKPSSLRRQQLIRECPILANIEP 69

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQ 128
           KQIKVWFQNRRCREKQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN F +Q
Sbjct: 70  KQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMQQ 129

Query: 129 QTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKA 187
           Q Q A   A       S VT+ QH L          RDA+ PAGLLS+AEETL EFLSKA
Sbjct: 130 QLQTAPAAADASCD--SAVTTPQHSL----------RDANDPAGLLSLAEETLAEFLSKA 177

Query: 188 TGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD 247
           TGTAV+WVQMPGMKPGPDS+GI AIS  C+GVAARACGLV L+PT++AEILKDR S +RD
Sbjct: 178 TGTAVDWVQMPGMKPGPDSVGIFAISQRCSGVAARACGLVSLEPTKLAEILKDRQSRFRD 237

Query: 248 CRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN 307
           CR++E   + P G+ GTIELLY Q+YAPTTLAPARDFW LRYT  LE+GSLVVC+RSL+ 
Sbjct: 238 CRNLEPFTMFPAGNGGTIELLYRQIYAPTTLAPARDFWTLRYTISLENGSLVVCDRSLSG 297

Query: 308 TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 367
           +  GP+   A  FVRAEMLPSGYLIRPCEGGGSIIHIVDH++L+ WSVPEVLRPLYESS 
Sbjct: 298 SGAGPNAAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSK 357

Query: 368 LIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
            +AQK T+ ALRH+RQI+ E S   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS
Sbjct: 358 AVAQKVTITALRHVRQIAHETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWS 417

Query: 428 MLESDGIDDVTVHVNSSPSKMMGVQ----LSYVNGFPSMSNAVLCAKASMLLQDVPPAIL 483
           ++ SDG +DV + VN++ + +        LS++ G       +LCAKASMLLQ+VPPA+L
Sbjct: 418 LMNSDGAEDVIIAVNTTKNLISANNPAHSLSFLGG-------ILCAKASMLLQNVPPAVL 470

Query: 484 LRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEV 542
           +RFLREHRSEWAD S+DAYSAA++KAG  + P  R+  F G Q+I+PL HTIE EE LEV
Sbjct: 471 VRFLREHRSEWADFSVDAYSAASLKAGSYAYPGMRSMRFTGSQIIMPLGHTIEQEELLEV 530

Query: 543 IKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFR 602
           I+LE  +  +ED  +  DI LLQ+CSG+DENAVG C+ELVFAPID  F DDAP++PSGFR
Sbjct: 531 IRLEGHSFAQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLLPSGFR 590

Query: 603 IIPLDS----GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFE 658
           +IPL+S     ++  + NRTLDL S+LEVGP  N AS D S+ C   +SV+TIAFQF FE
Sbjct: 591 VIPLESKTKDAQEALTTNRTLDLTSSLEVGPVTNHASVDGSS-C-HLRSVLTIAFQFPFE 648

Query: 659 MHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
            +LQ+NVA+MARQYVR +I+SVQRVA A+SPS      G +   GSPEA TLA WICQSY
Sbjct: 649 SNLQDNVATMARQYVRSVISSVQRVATAISPSGLNPALGPKLSAGSPEALTLAHWICQSY 708


>gi|297851492|ref|XP_002893627.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339469|gb|EFH69886.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 840

 Score =  931 bits (2406), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/723 (64%), Positives = 555/723 (76%), Gaps = 27/723 (3%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M   S   RDS D G      D+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 1   MMAHSMDDRDSPDKG-----FDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECP 55

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           IL NIEP+QIKVWFQNRRCREKQRKE++RLQ VNRKL+AMNKLLMEENDRLQKQVS LVY
Sbjct: 56  ILCNIEPRQIKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVY 115

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETL 180
           EN F + +   A+   TTD SCESVV  GQ        HQHP RDA+ PA LLSIAEETL
Sbjct: 116 ENGFMKHRIHTASG-TTTDNSCESVVVIGQQRQQQNPTHQHPQRDANNPANLLSIAEETL 174

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
            EFL KATGTAV+WVQM GMKPGPDSIGIVA+S  C+G+AARACGLV L+P +VAEILKD
Sbjct: 175 AEFLCKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKD 234

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSW+RDCR VE +NV+PTG+ GTIEL+  Q+YAPTTLA ARDFW LRY++ LEDGS VV
Sbjct: 235 RPSWFRDCRCVETLNVIPTGNGGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVV 294

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSL +   GP+ P +  FVRA+ML SG+LIRPC+GGGSIIHIVDH+DL+  SVPEVLR
Sbjct: 295 CERSLTSATGGPNGPLSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLR 354

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESS ++AQK T+AALRH+RQI+QE S       GR+PA LR  SQRL RGFN+A+NG
Sbjct: 355 PLYESSKILAQKMTVAALRHVRQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNG 414

Query: 421 FTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGF-PSMSNAVLCAKASMLLQDVP 479
           F D+GWS + SDG +D+T+ +NSS +K  G Q  Y + F PS  + VLCAKASMLLQ+VP
Sbjct: 415 FVDDGWSPMSSDGAEDITIMINSSSAKFAGSQ--YGSSFLPSFGSGVLCAKASMLLQNVP 472

Query: 480 PAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEE 538
           P +L+RFLREHR+EWAD  +DAYSAA+++A P ++P  R G F   QVILPLA T+EHEE
Sbjct: 473 PLVLIRFLREHRAEWADYGVDAYSAASLRATPFTVPCVRTGGFPSNQVILPLAQTLEHEE 532

Query: 539 FLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIP 598
           FLEV++L   A+  EDM +  D++LLQLCSGVDEN VG CA+LVFAPID SF+DDAP++P
Sbjct: 533 FLEVVRLGGHAYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLP 592

Query: 599 SGFRIIPLDSG---KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
           SGFR+IPLD      D  S +RT DLAS+L+          DS T   +++ V+TIAFQF
Sbjct: 593 SGFRVIPLDQKTNPNDHQSASRTRDLASSLD-----GSTKTDSET---NSRLVLTIAFQF 644

Query: 656 AFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWIC 715
            F+ H ++NVA+MARQYVR ++ S+QRVALA++P       G    P SPEA TL RWI 
Sbjct: 645 TFDNHSRDNVATMARQYVRNVVGSIQRVALAITP-----RPGSMQLPTSPEALTLVRWIT 699

Query: 716 QSY 718
           +SY
Sbjct: 700 RSY 702


>gi|414871038|tpg|DAA49595.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 835

 Score =  931 bits (2405), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/706 (65%), Positives = 551/706 (78%), Gaps = 20/706 (2%)

Query: 18  QKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQN 77
           +K  MD GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+RECPILSNIE KQIKVWFQN
Sbjct: 13  EKSGMDTGKYVRYTPEQVEALERVYAECPKPSSARRQQLLRECPILSNIEAKQIKVWFQN 72

Query: 78  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLA 137
           RRCR+KQR E+SRLQ+VNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + +QQ QN +   
Sbjct: 73  RRCRDKQRNESSRLQSVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSL-- 130

Query: 138 TTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQ 196
            TD SCES  T      TP        RDAS P+GLL+IAEETLTEFLSKATGTA++WVQ
Sbjct: 131 ATDASCESNAT------TPANL-----RDASNPSGLLAIAEETLTEFLSKATGTAIDWVQ 179

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDS GIV ISHG  GVAARACGLV L+PT++ EILKDRPSW+RDCRS+EV  +
Sbjct: 180 MPGMKPGPDSFGIVTISHGGRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVYTM 239

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           LP G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ + +G S   
Sbjct: 240 LPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAAT 299

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
              FVRAEMLPSGYL+R CEGGGSI+ IVDH+DL+ WSVPEVLRPLYESS ++AQK T  
Sbjct: 300 TQQFVRAEMLPSGYLVRQCEGGGSIVRIVDHLDLDAWSVPEVLRPLYESSRVVAQKMTTT 359

Query: 377 ALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
           ALRHLRQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DG++D
Sbjct: 360 ALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMCGDGMED 419

Query: 437 VTVHVNSSPSKMMGVQLSYVNGFPSMS-NAVLCAKASMLLQDVPPAILLRFLREHRSEWA 495
           V +  N   SK +    +   GF +     ++CAKASMLLQ VPPA+L+RFLREHRSEWA
Sbjct: 420 VIIACN---SKKIRSSSNPATGFGAPGPGGIICAKASMLLQSVPPAVLVRFLREHRSEWA 476

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           D + DAYSA+A+K  PCSLP  R   F G Q+I+PLAHT+E+EE LEV++LE      ++
Sbjct: 477 DYNFDAYSASALKTSPCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQTLTHDE 536

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPS 614
            ++  DI LLQLC+G+DE ++G+C +LVFAPID  F DDAP++ SGFR+IPLD   D P 
Sbjct: 537 GLLSRDIHLLQLCTGMDEKSMGSCFQLVFAPIDELFPDDAPLVSSGFRVIPLDIKTDGPP 596

Query: 615 PNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVR 674
             RTLDLAS+LEVG T  + +G+ S    + +SV+TIAFQF +E HLQ+ VA+MARQYVR
Sbjct: 597 SGRTLDLASSLEVGATTQQVAGNGSQDVCNLRSVLTIAFQFPYETHLQDTVAAMARQYVR 656

Query: 675 GIIASVQRVALALSPSRFGSN-AGLRPPPGSPEAHTLARWICQSYR 719
            I+++VQRV++A+SPS  G N AG +   GSPEA TL RWICQSYR
Sbjct: 657 SIVSAVQRVSMAISPSHSGLNTAGQKLISGSPEAATLVRWICQSYR 702


>gi|222424857|dbj|BAH20380.1| AT1G52150 [Arabidopsis thaliana]
          Length = 702

 Score =  929 bits (2402), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/577 (78%), Positives = 501/577 (86%), Gaps = 10/577 (1%)

Query: 145 SVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGP 204
           SVVTSGQH L      Q+P RDASPAGLLSIAEETL EFLSKATGTAVEWVQMPGMKPGP
Sbjct: 1   SVVTSGQHQLA----SQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGP 56

Query: 205 DSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGT 264
           DSIGI+AISHGCTGVAARACGLVGL+PTRVAEI+KDRPSW+R+CR+VEV+NVLPT + GT
Sbjct: 57  DSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVMNVLPTANGGT 116

Query: 265 IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE 324
           +ELLYMQLYAPTTLAP RDFWLLRYTSVLEDGSLVVCERSL +TQNGPSMP   +FVRAE
Sbjct: 117 VELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAE 176

Query: 325 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQI 384
           ML SGYLIRPC+GGGSIIHIVDHMDLE  SVPEVLRPLYES  ++AQKTTMAALR L+QI
Sbjct: 177 MLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQI 236

Query: 385 SQEVSQ--PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN 442
           +QEV+Q   SV GWGRRPAALRALSQRLSRGFNEA+NGFTDEGWS++  D +DDVT+ VN
Sbjct: 237 AQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI-GDSMDDVTITVN 295

Query: 443 SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAY 502
           SSP K+MG+ L++ NGF  +SN VLCAKASMLLQ+VPPAILLRFLREHRSEWAD++IDAY
Sbjct: 296 SSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAY 355

Query: 503 SAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIF 562
            AAAVK GPCS    R G FGGQVILPLAHTIEHEEF+EVIKLE + H  ED I+P DIF
Sbjct: 356 LAAAVKVGPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDIF 412

Query: 563 LLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLA 622
           LLQLCSG+DENAVG CAEL+FAPIDASF+DDAP++PSGFRIIPLDS K+  SPNRTLDLA
Sbjct: 413 LLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEVSSPNRTLDLA 472

Query: 623 SALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQR 682
           SALE+G  G KAS D S      +SV+TIAF+F  E H+QE+VASMARQYVRGII+SVQR
Sbjct: 473 SALEIGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYVRGIISSVQR 532

Query: 683 VALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           VALALSPS   S  GLR P G+PEA TLARWICQSYR
Sbjct: 533 VALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYR 569


>gi|89514843|gb|ABD75296.1| class III homeodomain-leucine zipper protein C3HDZ1 [Phaeoceros
           carolinianus]
          Length = 861

 Score =  927 bits (2395), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/731 (64%), Positives = 568/731 (77%), Gaps = 32/731 (4%)

Query: 10  RDSRDSGGQKMIMDN-GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           +DSR S      MDN GKYVRYT EQVEALER+Y+ECPKPSS+RRQQLI++CPIL+NIE 
Sbjct: 7   KDSRSSP-----MDNTGKYVRYTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEA 61

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFR- 127
           KQIKVWFQNRRCREKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN + R 
Sbjct: 62  KQIKVWFQNRRCREKQRKEATRLLSVNAKLTALNKLLMEENERLSKHTSQLAIENQYLRQ 121

Query: 128 ---------------QQTQNAATLATTDTSCESVVTSG-QHHLTPQQQHQHPPRDASPAG 171
                          +++Q    + TTDTS ES VT G Q H TPQ    HPPRDASPAG
Sbjct: 122 QQQQLVKSDCIGKPSRRSQEQLAMTTTDTSSESAVTGGLQQHPTPQ----HPPRDASPAG 177

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
           LLSIAEETLTEFL+KATGTAV+W+QMPGMKPGP+SIGIVAISHGC G+AARACGLVGL+P
Sbjct: 178 LLSIAEETLTEFLAKATGTAVDWIQMPGMKPGPESIGIVAISHGCAGIAARACGLVGLEP 237

Query: 232 TRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTS 291
           T+VAEILKDRPSW RDCR ++++   PTG+ GT+EL+Y Q+YAPTTLAP RDF  LRYT+
Sbjct: 238 TKVAEILKDRPSWLRDCRRLDILGAFPTGNGGTVELIYTQMYAPTTLAPPRDFCTLRYTT 297

Query: 292 VLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLE 351
            LEDG+LV+CERSL+    GP+MP   +FVRAEMLPSGYLIRPC+GGGSIIHIVDH+DLE
Sbjct: 298 FLEDGNLVICERSLSGAHGGPTMPPVQYFVRAEMLPSGYLIRPCDGGGSIIHIVDHVDLE 357

Query: 352 PWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLS 411
           PWSVPEVLRPLYESS ++AQKTT+ ALRHLRQ++ E +     G G++PA LRALSQR++
Sbjct: 358 PWSVPEVLRPLYESSAVLAQKTTIGALRHLRQMAVESAIELPIGNGQQPAVLRALSQRIA 417

Query: 412 RGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSP-SKMMGVQLSYVNGFPSMSNAVLCAK 470
           RGFNEA+NGF+D+GW+ + +DG+DDV+V  NSSP  K +G Q +  +   S+   +LCAK
Sbjct: 418 RGFNEAVNGFSDDGWNTIVTDGMDDVSVAFNSSPHCKQLGAQATSTDRLCSLGGGILCAK 477

Query: 471 ASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPL 530
           ASMLLQ+VPPA+L+RFLREHRSEWAD  IDA +AAA+K         R     GQ+ +PL
Sbjct: 478 ASMLLQNVPPALLIRFLREHRSEWADCDIDADAAAALKTSTYGAS-GRGSLCSGQLPMPL 536

Query: 531 AHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASF 590
           AH +E EEFLEV+KLE    + +  ++P + FLLQLCSG+DENAVG CA+LVFAP+DA+ 
Sbjct: 537 AHAVEQEEFLEVVKLEGHGAH-DGTVLPRETFLLQLCSGIDENAVGACAQLVFAPVDAAV 595

Query: 591 SDDAPIIPSGFRIIPLDSG--KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSV 648
           SDD P++PSGFR+IPLDSG        +RTLDLAS LE G   ++  GDS T     +SV
Sbjct: 596 SDDVPLLPSGFRVIPLDSGLIDGYGGLSRTLDLASTLEGGSESSRFVGDSGTSSCHLRSV 655

Query: 649 ITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAH 708
           +TIAFQF++E+H ++ VA+MARQYVR ++ASVQRVA+AL+P+R GS   LR  PG+PEA 
Sbjct: 656 LTIAFQFSYEIHTRDAVAAMARQYVRTVVASVQRVAMALAPARVGSQLALRQSPGTPEAL 715

Query: 709 TLARWICQSYR 719
            LAR I QSYR
Sbjct: 716 LLARRILQSYR 726


>gi|15239411|ref|NP_200877.1| homeobox-leucine zipper protein REVOLUTA [Arabidopsis thaliana]
 gi|75203823|sp|Q9SE43.2|REV_ARATH RecName: Full=Homeobox-leucine zipper protein REVOLUTA; AltName:
           Full=HD-ZIP protein REV; AltName: Full=Homeodomain
           transcription factor REV; AltName: Full=Protein
           AMPHIVASAL VASCULAR BUNDLE 1; AltName: Full=Protein
           INTERFASCICULAR FIBERLESS 1
 gi|7229679|gb|AAF42938.1|AF233592_1 REVOLUTA [Arabidopsis thaliana]
 gi|24416437|gb|AAF15262.2|AF188994_1 homeodomain-leucine zipper protein interfascicular fiberless 1
           [Arabidopsis thaliana]
 gi|9759333|dbj|BAB09842.1| Revoluta [Arabidopsis thaliana]
 gi|27413560|gb|AAO11835.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|110738992|dbj|BAF01416.1| REVOLUTA or interfascicular fiberless 1 [Arabidopsis thaliana]
 gi|332009984|gb|AED97367.1| homeobox-leucine zipper protein REVOLUTA [Arabidopsis thaliana]
          Length = 842

 Score =  921 bits (2381), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/724 (63%), Positives = 560/724 (77%), Gaps = 28/724 (3%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M ++    R+       + +  +GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIREC 
Sbjct: 1   MEMAVANHRERSSDSMNRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECS 60

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           IL+NIEPKQIKVWFQNRRCR+KQRKEASRLQ+VNRKL+AMNKLLMEENDRLQKQVSQLV 
Sbjct: 61  ILANIEPKQIKVWFQNRRCRDKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVC 120

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDA-SPAGLLSIAEETL 180
           EN + +QQ     T    D SCESVVT+ QH L          RDA SPAGLLSIAEETL
Sbjct: 121 ENGYMKQQL----TTVVNDPSCESVVTTPQHSL----------RDANSPAGLLSIAEETL 166

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
            EFLSKATGTAV+WVQMPGMKPGPDS+GI AIS  C GVAARACGLV L+P ++AEILKD
Sbjct: 167 AEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQRCNGVAARACGLVSLEPMKIAEILKD 226

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSW+RDCRS+EV  + P G+ GTIEL+YMQ YAPTTLAPARDFW LRYT+ L++GS VV
Sbjct: 227 RPSWFRDCRSLEVFTMFPAGNGGTIELVYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVV 286

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSL+ +  GP+   A  FVRAEML SGYLIRPC+GGGSIIHIVDH++LE WSVP+VLR
Sbjct: 287 CERSLSGSGAGPNAASASQFVRAEMLSSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLR 346

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESS ++AQK T++ALR++RQ++QE +   V G GR+PA LR  SQRLSRGFN+A+NG
Sbjct: 347 PLYESSKVVAQKMTISALRYIRQLAQESNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNG 406

Query: 421 FTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
           F D+GWS +  DG +D+ V +NS+        L+ ++   S    VLCAKASMLLQ+VPP
Sbjct: 407 FGDDGWSTMHCDGAEDIIVAINSTK------HLNNISNSLSFLGGVLCAKASMLLQNVPP 460

Query: 481 AILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEF 539
           A+L+RFLREHRSEWAD ++DAYSAA +KAG  + P  R   F G Q+I+PL HTIEHEE 
Sbjct: 461 AVLIRFLREHRSEWADFNVDAYSAATLKAGSFAYPGMRPTRFTGSQIIMPLGHTIEHEEM 520

Query: 540 LEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPS 599
           LEV++LE  +  +ED  M  D+ LLQ+C+G+DENAVG C+EL+FAPI+  F DDAP++PS
Sbjct: 521 LEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSELIFAPINEMFPDDAPLVPS 580

Query: 600 GFRIIPLDSG----KDTPSPN-RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQ 654
           GFR+IP+D+     +D  + N RTLDL S+LEVGP+   ASG+S +   S++ ++TIAFQ
Sbjct: 581 GFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSPENASGNSFSS-SSSRCILTIAFQ 639

Query: 655 FAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWI 714
           F FE +LQENVA MA QYVR +I+SVQRVA+A+SPS    + G +  PGSPEA TLA+WI
Sbjct: 640 FPFENNLQENVAGMACQYVRSVISSVQRVAMAISPSGISPSLGSKLSPGSPEAVTLAQWI 699

Query: 715 CQSY 718
            QSY
Sbjct: 700 SQSY 703


>gi|224131988|ref|XP_002328157.1| predicted protein [Populus trichocarpa]
 gi|60327623|gb|AAX19051.1| class III HD-Zip protein 2 [Populus trichocarpa]
 gi|222837672|gb|EEE76037.1| predicted protein [Populus trichocarpa]
          Length = 844

 Score =  918 bits (2373), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/725 (64%), Positives = 557/725 (76%), Gaps = 36/725 (4%)

Query: 10  RDSRDSGG-QKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           R+S  SG   K + D+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPIL+NIEP
Sbjct: 8   RESSSSGSINKHLTDDGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILANIEP 67

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQ 128
           KQIKVWFQNRRCREKQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN F RQ
Sbjct: 68  KQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMRQ 127

Query: 129 QTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKA 187
           Q Q      TTD SC+SVV + QH L          RDA+ PAGLLSIAEETL+EFL+KA
Sbjct: 128 QLQTV----TTDASCDSVVATPQHSL----------RDANNPAGLLSIAEETLSEFLAKA 173

Query: 188 TGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD 247
           TGTA+EWVQMPGMKPGPDSIGI +IS  C GVAARACGLV L+P ++AEILKDR SW+RD
Sbjct: 174 TGTALEWVQMPGMKPGPDSIGIFSISQRCGGVAARACGLVSLEPKKIAEILKDRSSWFRD 233

Query: 248 CRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN 307
           CR++EV  + P G+ GTIEL+Y Q+YAPTTLAPARD W LRYT+ LE+GSLVVCERSL+ 
Sbjct: 234 CRNLEVFTMFPAGNGGTIELVYSQIYAPTTLAPARDMWTLRYTTSLENGSLVVCERSLSG 293

Query: 308 TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 367
              GP    A  FVRAEMLPSGYLIRPCE GGSIIHIVDH++L+ WSVPEVLRPLYESS 
Sbjct: 294 YGAGPDAAAAAQFVRAEMLPSGYLIRPCE-GGSIIHIVDHLNLQAWSVPEVLRPLYESSK 352

Query: 368 LIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
            +AQK T+AALR++RQ++ E S   V G GR+PA LR  +QRLSRGFN+A+NGF D+GWS
Sbjct: 353 AVAQKMTIAALRYVRQVAHETSGEVVYGLGRQPAVLRTFNQRLSRGFNDAINGFNDDGWS 412

Query: 428 MLESDGIDDVTVHVNSSPSKMMGVQ-----LSYVNGFPSMSNAVLCAKASMLLQDVPPAI 482
           ++ +DG +DV + VNS+ + ++G       LS++ G       +LCAKASMLLQ+V PA+
Sbjct: 413 LMNADGAEDVIIAVNSTKN-LIGANNSAHSLSFLGG-------ILCAKASMLLQNVHPAV 464

Query: 483 LLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLE 541
           L+ FLREH +EWAD S+DAYSAA  KAG  + P  R   F G Q+ +PL HTIE E+ LE
Sbjct: 465 LVCFLREHHAEWADFSVDAYSAALWKAGSYAYPGMRPMRFTGSQITMPLGHTIEQEDLLE 524

Query: 542 VIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGF 601
           VI+LE  +  +ED  +  DI LLQ+CSG+DENAVG C+ELVFAPID +F DDAP++PSGF
Sbjct: 525 VIRLEGHSFAQEDAFVSQDIHLLQICSGIDENAVGACSELVFAPIDETFPDDAPLLPSGF 584

Query: 602 RIIPLDS-GKDTP---SPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAF 657
           RII L+S  KDT    + N TLDL S+LE G   N  + D S+ C S +SV+TIAFQF F
Sbjct: 585 RIISLESKAKDTQEVLTTNCTLDLTSSLEAGLAINHTAVDGSS-CHSLRSVLTIAFQFPF 643

Query: 658 EMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQS 717
           E +LQ+NVA+MARQYVR +I+SVQRVA+A+SPS      G +   GSPEA TLA WICQS
Sbjct: 644 ESNLQDNVATMARQYVRSVISSVQRVAMAISPSGLSPVLGPKLSAGSPEALTLAHWICQS 703

Query: 718 YRCVF 722
           +R V 
Sbjct: 704 HRQVL 708


>gi|449456008|ref|XP_004145742.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           REVOLUTA-like [Cucumis sativus]
          Length = 840

 Score =  910 bits (2353), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/720 (64%), Positives = 541/720 (75%), Gaps = 18/720 (2%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           MA++    R+S      + +  +GKYVRYT EQVEALER+Y ECPKPSS+RRQQL+R+CP
Sbjct: 1   MAMAIAHHRESSTGSITRHLDSSGKYVRYTSEQVEALERVYAECPKPSSLRRQQLVRDCP 60

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKL AMNKLLMEENDRLQKQVSQLV 
Sbjct: 61  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSQLVC 120

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETL 180
           EN F RQQ       AT D SC+SVVT      TPQ       RDA+ PAG  S     L
Sbjct: 121 ENGFMRQQLHTVPAAATADASCDSVVT------TPQPSR----RDANNPAGXFSKPIIDL 170

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
             FL     T+  WVQMPGMKPGPDS+GI AIS  C GVAARACGLV L+P+++AEILKD
Sbjct: 171 F-FLLTYKXTSCXWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPSKIAEILKD 229

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RPSW+RDCRS+EV  + P G+ GTIEL+Y Q+YAPTTLAPARDFW LRYT  LE+GSLVV
Sbjct: 230 RPSWFRDCRSLEVFTMFPAGNGGTIELVYTQVYAPTTLAPARDFWTLRYTITLENGSLVV 289

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSL+ +  GPS   A  FVRAEMLPSGYLIRPCEGGGSIIHIVDH++LE W VPEVLR
Sbjct: 290 CERSLSGSGAGPSEAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWHVPEVLR 349

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYESS ++AQK T+AALR++RQI+QE S   V G GR+PA LR  SQRLSRGFN+A+NG
Sbjct: 350 PLYESSKVVAQKMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNG 409

Query: 421 FTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
           F D GWS++  +G +DV + VNS  +K  G   +  N   +    VLCAKASMLLQ+VPP
Sbjct: 410 FNDNGWSLINCEGAEDVVLTVNS--TKNFGTTSNPANSL-TYPGGVLCAKASMLLQNVPP 466

Query: 481 AILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEF 539
           A+L+RFLREHRSEWAD +IDAYSAA +KA   + P  R   F G Q+I+PL HTIEHEE 
Sbjct: 467 AVLVRFLREHRSEWADFNIDAYSAATLKANSYTYPGMRPTRFTGSQIIMPLGHTIEHEEL 526

Query: 540 LEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPS 599
           LEVI+LE     +ED  +  DI LLQ+CSG+DENAVG C+EL+FAPID  F DDAP++PS
Sbjct: 527 LEVIRLEGHPMVQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLLPS 586

Query: 600 GFRIIPLDS-GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFE 658
           GFRIIPLDS   D     RTLDL S+LEVG   +  +GD+S+   S +SV+TIAFQF FE
Sbjct: 587 GFRIIPLDSRTSDAKGSQRTLDLTSSLEVGSGTSNTAGDASSS-QSARSVLTIAFQFPFE 645

Query: 659 MHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
             +Q+NVA+MA QYVR +I+SVQRVA+A+SPS  G   G +  PGSPEA TLA WIC+SY
Sbjct: 646 SSMQDNVANMAHQYVRSVISSVQRVAMAISPSGGGPALGPKLSPGSPEALTLAHWICKSY 705


>gi|357453943|ref|XP_003597252.1| Homeobox leucine-zipper protein [Medicago truncatula]
 gi|355486300|gb|AES67503.1| Homeobox leucine-zipper protein [Medicago truncatula]
          Length = 839

 Score =  903 bits (2333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/721 (62%), Positives = 549/721 (76%), Gaps = 32/721 (4%)

Query: 9   SRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           ++  RD+  ++ +  +GKYVRYT EQ+EALE++Y ECPKPSS+RRQQLIRECP+L+NIEP
Sbjct: 6   AQQQRDNSIERHLDSSGKYVRYTAEQIEALEKVYVECPKPSSLRRQQLIRECPVLANIEP 65

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQ 128
           KQIKVWFQNRRCREKQRKEAS+LQ+VNRKL+AMNKLLMEEN+RLQKQVSQLV EN F RQ
Sbjct: 66  KQIKVWFQNRRCREKQRKEASQLQSVNRKLSAMNKLLMEENERLQKQVSQLVNENGFMRQ 125

Query: 129 QTQNAATLATTDTS-CESVVTSGQHHLTPQQQHQHPPRDA-SPAGLLSIAEETLTEFLSK 186
           Q          D S  +S   +  + L          RDA SPAG LSIAEETLTEFLSK
Sbjct: 126 QLHPTPAAPNADGSGVDSAAAAPMNSL----------RDANSPAGFLSIAEETLTEFLSK 175

Query: 187 ATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR 246
           ATGTAV+WVQMPGMKPGPDS+GI AIS G  GVAARACGLV L+PT++ EILKDRP+WYR
Sbjct: 176 ATGTAVDWVQMPGMKPGPDSVGIFAISQGGNGVAARACGLVSLEPTKIVEILKDRPTWYR 235

Query: 247 DCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN 306
           DCRS EV  + P G+ GTIEL+Y Q YAP TLA ARDFW LRYT+ LE+GS+VVCERSL+
Sbjct: 236 DCRSSEVFTMFPAGNGGTIELVYTQTYAPMTLASARDFWTLRYTTNLENGSVVVCERSLS 295

Query: 307 NTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS 366
            T  GP+   A  F RAEMLPSGYLIRPCEGGGSIIHIVDH++L+ WSVPEVLRP+YESS
Sbjct: 296 GTGAGPNAAAASQFERAEMLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPIYESS 355

Query: 367 TLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW 426
            ++AQ+ T+AALR++RQ++QE S   V   GR+PA LR  SQRLSRGFN+A+NGF D GW
Sbjct: 356 QMVAQRLTIAALRYIRQVAQETSGDVVYSMGRQPAVLRTFSQRLSRGFNDAVNGFNDNGW 415

Query: 427 SMLESDGIDDVTVHVNS----SPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAI 482
           S+L  DG + VT+ VNS    S +      LS + G       ++CAKASMLLQ+  PA+
Sbjct: 416 SVLNCDGAEGVTISVNSIKNLSGTSNPASSLSLLGG-------IVCAKASMLLQNTTPAV 468

Query: 483 LLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLE 541
           L+RFLREHRSEWAD S+DA+SAA++KAG    P  R+  F G Q I+PL HTIEHEE LE
Sbjct: 469 LVRFLREHRSEWADFSVDAFSAASLKAGSYGYPGMRSTKFTGNQAIMPLGHTIEHEEMLE 528

Query: 542 VIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGF 601
           +I+LE +A  ++D  +  D+ LLQLC+G+DENAVG C+EL+FAPID  F +DAP++PSGF
Sbjct: 529 IIRLEGLA--QDDSFVSRDVHLLQLCTGIDENAVGACSELIFAPIDDMFPEDAPLVPSGF 586

Query: 602 RIIPLDS----GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAF 657
           RI+ L+S     K+T + NRTLDL S LEV P    A+GD+S  C + + V+T+AFQF F
Sbjct: 587 RIVLLNSQPGDTKNTTTANRTLDLTSGLEVSPATAHANGDAS--CPNNRCVLTVAFQFPF 644

Query: 658 EMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQS 717
           E  LQ+NVA+MARQYVR ++++VQ VA A+SPS   ++ G +  PG+PEA TLA+WICQS
Sbjct: 645 ESGLQDNVAAMARQYVRRVVSAVQAVATAISPSSVNTSGGAKLSPGTPEALTLAQWICQS 704

Query: 718 Y 718
           Y
Sbjct: 705 Y 705


>gi|206572101|gb|ACI13683.1| putative PHV HD-ZIPIII [Malus x domestica]
          Length = 783

 Score =  902 bits (2332), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/651 (67%), Positives = 524/651 (80%), Gaps = 5/651 (0%)

Query: 71  IKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQT 130
           IKVWFQNRRCREKQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVS LVYEN F +QQ 
Sbjct: 1   IKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGFMKQQL 60

Query: 131 QNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATG 189
             A+   TTD SCESVV SGQH        QHP RDA+ PAGLL+IAEETL EFLSKATG
Sbjct: 61  HTASG-TTTDNSCESVVMSGQHQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATG 119

Query: 190 TAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCR 249
           TAV+WVQM GMKPGPDSIGIVA+S  C+GVAARACGLV L+PT+VAEILKDR SW+RDCR
Sbjct: 120 TAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRKSWFRDCR 179

Query: 250 SVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQ 309
            +EV++++P G+ GTIEL+YMQ YAPTTLA ARDFW LRYT+ LEDGSLVVCERSL ++ 
Sbjct: 180 CLEVLSLIPAGNGGTIELVYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVVCERSLTSST 239

Query: 310 NGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLI 369
            GP  P +  FVRAEMLPSGYLIRPCEGGGSII+IVDH+DL+ WSVPEVLR LYESS ++
Sbjct: 240 GGPPGPTSASFVRAEMLPSGYLIRPCEGGGSIINIVDHVDLDAWSVPEVLRSLYESSKIL 299

Query: 370 AQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSML 429
           AQKTT++ALRH+RQI+QE S     G GR+PA LR   QRL  GFN+A+NGF D+GW+++
Sbjct: 300 AQKTTISALRHIRQIAQESSGEIQHGGGRQPAVLRTFCQRLCSGFNDAVNGFADDGWTLM 359

Query: 430 ESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE 489
            SDG++DVT+ +NSSP K++G Q +  + FP     VLCAKASMLLQ VPPA+L+RFLRE
Sbjct: 360 GSDGVEDVTIAINSSP-KVLGSQYN-TSIFPPFGGGVLCAKASMLLQSVPPALLVRFLRE 417

Query: 490 HRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENM 548
           HR+EWAD  +DAYSAA +KA P ++P+ R G F   Q ILPLA T+EHEEFLEV++LE  
Sbjct: 418 HRAEWADYGVDAYSAACLKASPYAVPLARGGGFPSTQNILPLAQTVEHEEFLEVVRLEGP 477

Query: 549 AHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDS 608
           A   ED+ +  D++LLQLCSGVDENAVG CA+LVFAPID SF+DDAP++PSGF +IPLD 
Sbjct: 478 AFSPEDVALTRDMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPLLPSGFHVIPLDP 537

Query: 609 GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASM 668
             D P+  RTLDLAS LEVG +G +A  D+     + +SV+TIAFQF FE HL++NVA+M
Sbjct: 538 KADGPTATRTLDLASTLEVGTSGARAINDADGNSYNRRSVLTIAFQFTFENHLRDNVAAM 597

Query: 669 ARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           ARQYVR +++SVQRVA+A++PS   S  G +P PG PEAHTLARWI +S+R
Sbjct: 598 ARQYVRSVVSSVQRVAMAIAPSPLSSQIGPKPLPGCPEAHTLARWIFRSFR 648


>gi|357448489|ref|XP_003594520.1| Homeobox-leucine zipper protein ATHB-14 [Medicago truncatula]
 gi|355483568|gb|AES64771.1| Homeobox-leucine zipper protein ATHB-14 [Medicago truncatula]
          Length = 823

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/714 (62%), Positives = 549/714 (76%), Gaps = 50/714 (7%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR   
Sbjct: 9   MDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR--- 65

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ--TQNAATLATT 139
                            + ++ L++     + KQVS LVYEN + +QQ  T +A+   TT
Sbjct: 66  -----------------SFLHLLVIV----VTKQVSHLVYENGYMKQQIHTVSASAATTT 104

Query: 140 DTSCESVVTSGQHHLTPQQQH--QHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQ 196
           D SC+SVV SGQ+    QQQ+  Q P RDA+ PAGLL++AEETL EFLSKATGTAV+WVQ
Sbjct: 105 DNSCDSVVMSGQN----QQQNPTQRPQRDANNPAGLLAVAEETLAEFLSKATGTAVDWVQ 160

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           M GMKPGP+SIGIVA+S   +G+AARACGLV L+PT+VAEILKDR SWYRDCR V+V+++
Sbjct: 161 MIGMKPGPESIGIVAVSRNSSGIAARACGLVSLEPTKVAEILKDRLSWYRDCRCVDVLSI 220

Query: 257 LPTGSSGTIELLYMQLYAPTT---------LAPARDFWLLRYTSVLEDGSLVVCERSLNN 307
           +PTG  GTIEL+YMQ+   +T         L  +RDFW LRYT+ LEDGSLV+CERSLN 
Sbjct: 221 VPTGGGGTIELMYMQVLFYSTKELTMPFLFLLTSRDFWTLRYTTSLEDGSLVICERSLNA 280

Query: 308 TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 367
           +  GP+ P   +FVRAEMLPSG+LIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS 
Sbjct: 281 STGGPTGPSPSNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSK 340

Query: 368 LIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           ++AQK T+AAL+H++QI+QE S     G GR+PA LR  SQRL RGFN+A+NGF D+GWS
Sbjct: 341 ILAQKLTIAALQHIKQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWS 400

Query: 428 MLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL 487
           +L +DG++DVT+ VNSSP+K +G   +Y + FP+    VLCAKASMLLQ+VPPA+L+RFL
Sbjct: 401 LLGNDGVEDVTIAVNSSPNKFLGS--NYSSMFPTFGGGVLCAKASMLLQNVPPALLVRFL 458

Query: 488 REHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLE 546
           REHRSEWAD  +DAYSA  +K+ P ++P PR G F   QVILPLA TIEHEEFLEV+++E
Sbjct: 459 REHRSEWADYGVDAYSATCLKSSPYAVPCPRPGGFPSSQVILPLAPTIEHEEFLEVVRIE 518

Query: 547 NMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPL 606
             A   ED+ +  D++LLQLCSG+DEN+VG CA+LVFAPID SF+DDA ++PSGFR+IPL
Sbjct: 519 GHAFSPEDVALARDMYLLQLCSGIDENSVGACAQLVFAPIDESFADDALLLPSGFRVIPL 578

Query: 607 DSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCG-STKSVITIAFQFAFEMHLQENV 665
           D   D P+ +RTLDL   LE G    + SG+ +   G + +SV+TIAFQF FE HL++NV
Sbjct: 579 DPKSDGPTTSRTLDL---LE-GSRNARPSGEGAGSNGYNLRSVLTIAFQFTFENHLRDNV 634

Query: 666 ASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           ASMARQYVR ++ASVQRVA+A++PSR G+  G +  PGSPEAH LARWI +SYR
Sbjct: 635 ASMARQYVRSVVASVQRVAMAIAPSRPGTQLGPKSLPGSPEAHALARWISRSYR 688


>gi|255564395|ref|XP_002523194.1| conserved hypothetical protein [Ricinus communis]
 gi|223537601|gb|EEF39225.1| conserved hypothetical protein [Ricinus communis]
          Length = 771

 Score =  880 bits (2274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/597 (72%), Positives = 498/597 (83%), Gaps = 4/597 (0%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 19  MDSSKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 78

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LVYEN + RQQ Q A+   TTD 
Sbjct: 79  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMRQQLQTASA-TTTDN 137

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
           SCESVV +GQ         QHP RDA+ PAGLL+IAEETL EFLSKATGTAV+WVQM GM
Sbjct: 138 SCESVVINGQQQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGM 197

Query: 201 KPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTG 260
           KPGPDSIGIVA+S  C+GVAARACGLV L+PT+VAEILKDRPSW+RDCR ++ ++V+PTG
Sbjct: 198 KPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCRCLDTLSVIPTG 257

Query: 261 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHF 320
           + GTIEL+YMQ YAPTTLA AR+FW LRYT+ LEDGSLV+CERSL  T  GP+ P A  F
Sbjct: 258 NGGTIELIYMQTYAPTTLAAAREFWTLRYTTTLEDGSLVICERSLTTTTGGPTGPPASSF 317

Query: 321 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH 380
           VRAEMLPSGYLIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS ++AQK TMAALRH
Sbjct: 318 VRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTMAALRH 377

Query: 381 LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
           +RQI+QE S     G GR+PA LR  SQRL RGFN+A+NGF+D+GWS+L  DG++DVT+ 
Sbjct: 378 IRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFSDDGWSLLGGDGVEDVTIV 437

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSID 500
           +NS+P+K +G Q +  + FP+    VLCAKASMLLQ+VPPA+L+RFLREHRSEWAD  +D
Sbjct: 438 INSTPNKFLGSQYT-TSMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVD 496

Query: 501 AYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
            YSAA +KA P ++P  R G F   QVILPLAHT+EHEEFLEV++LE  A   ED+ +  
Sbjct: 497 TYSAACLKASPYAVPCARPGGFPSSQVILPLAHTVEHEEFLEVVRLEGHAFSPEDVALAR 556

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPN 616
           D++LLQLCSGVDENAVG CA+LVFAPID SF+DDAP++PSGFR+IPLD   D P+P 
Sbjct: 557 DMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKTDGPAPT 613


>gi|125532383|gb|EAY78948.1| hypothetical protein OsI_34053 [Oryza sativa Indica Group]
          Length = 799

 Score =  876 bits (2264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/703 (63%), Positives = 536/703 (76%), Gaps = 42/703 (5%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR
Sbjct: 1   MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCR 60

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           +KQRKEASRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + +QQ QN +     DT
Sbjct: 61  DKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSL--GNDT 118

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
           SCES VT      TPQ    +P RDAS P+GLL+IAEETLTEFLSKATGTAV+WV MPGM
Sbjct: 119 SCESNVT------TPQ----NPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGM 168

Query: 201 KPGPDSIGIVAISHGCTGVAARACGLVGLD---PTRVAEILKDRPSWYRDCRSVEVVNVL 257
           K                      C L+         + EILKDRPSW+RDCRS+EV  + 
Sbjct: 169 KVD--------------------CQLLRFTLPASNDIVEILKDRPSWFRDCRSLEVFTMF 208

Query: 258 PTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQA 317
           P G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ ++DGSLVVCERSL+ +  GPS   A
Sbjct: 209 PAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMDDGSLVVCERSLSGSGGGPSTASA 268

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
             FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS ++AQK T AA
Sbjct: 269 QQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAA 328

Query: 378 LRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           LRH+RQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DGI+DV
Sbjct: 329 LRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDV 388

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADS 497
            +  N+   +      +  N F +    V+CAKASMLLQ VPPA+L+RFLREHRSEWAD 
Sbjct: 389 IIACNAKKVRNTS---TSANAFVT-PGGVICAKASMLLQSVPPAVLVRFLREHRSEWADY 444

Query: 498 SIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
           + DAYSA+++K   CSLP  R   F G Q+I+PLAHT+E+EE LEV++LE  A   +D +
Sbjct: 445 NFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGL 504

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPN 616
           M  DI LLQLC+G+DE ++G+C +LVFAPID  F DDAP+I SGFR+IPLD   D     
Sbjct: 505 MSRDIHLLQLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAG 564

Query: 617 RTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGI 676
           RTLDLAS+LEVG T  + +GD+S    + +SV+TIAFQF +EMHLQ++VA+MARQYVR I
Sbjct: 565 RTLDLASSLEVGSTA-QPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSI 623

Query: 677 IASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           ++SVQRV++A+SPSR G NAG +   G PEA TLARWICQSY+
Sbjct: 624 VSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQ 666


>gi|168004063|ref|XP_001754731.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693835|gb|EDQ80185.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 821

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/704 (63%), Positives = 540/704 (76%), Gaps = 20/704 (2%)

Query: 22  MDN-GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 80
           MD+ GKYVRYT EQVEALER+YHECPKPSS+RR QLI+ECPIL+NIEPKQIKVWFQNRRC
Sbjct: 1   MDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWFQNRRC 60

Query: 81  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA-ATLATT 139
           REKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  +N   RQQ  N  A +A+T
Sbjct: 61  REKQRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLDNHALRQQLPNLPAGVAST 120

Query: 140 DTSCESVVTSGQ-HHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           DTSC+S VT G   HLT   QH  P  DASPAGLLS+AEETLT+FL+KATGTAV+W+Q+P
Sbjct: 121 DTSCDSAVTGGLPQHLT--SQHSSP--DASPAGLLSMAEETLTDFLAKATGTAVDWIQLP 176

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPD+IGI+AISHGC G+AARACGL  LD ++VAEILKDRP W +DCR +EV+  LP
Sbjct: 177 GMKPGPDAIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWSQDCRRMEVLGTLP 236

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
           TG+ GTIELLY Q+YAPTTLAPARDF  LRYT++LEDG+LV+CERSL    NGP+MP   
Sbjct: 237 TGNGGTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTGKHNGPTMPPVQ 296

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
            F+RAEM PSGYLIRPCEGGG IIHIVDH++ EPWSVPEVLRPLYES  ++A K+T+AAL
Sbjct: 297 SFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPAVLAHKSTIAAL 356

Query: 379 RHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
           R+LR+I+ E S   +   G+ PA +R LSQRL++GFN+A+NGF D+GW  +ESDG+DDV+
Sbjct: 357 RYLRRIAAEESGEIIIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGWVPMESDGMDDVS 416

Query: 439 VHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSS 498
           V +N++P  M G Q++      S+   +LCAKASMLLQ+VPPA+L+RFLREHRSEWAD  
Sbjct: 417 VMLNATPKSMEG-QIATDKLLFSLGGGILCAKASMLLQNVPPALLIRFLREHRSEWADHE 475

Query: 499 IDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMP 558
           IDA +A A + G  +  V R      Q+ LPLA   E  EFLEV+KLE  +  +   ++ 
Sbjct: 476 IDANAATAFR-GASNGHVSRGRMSHVQLPLPLAQFGEQGEFLEVVKLEGHSAVQHS-VLS 533

Query: 559 SDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRT 618
            D FLLQLCSG++E AVG  A+LVFAPIDA+ S+D P++PSGFR+IP+DS  D    NRT
Sbjct: 534 RDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAVSEDIPLLPSGFRVIPVDSSVDGIGLNRT 593

Query: 619 LDLASAL---EVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRG 675
           LDLAS L   E G  G   S  SS+Q    +SV+TIAFQFA+E+H +E  A MARQYVR 
Sbjct: 594 LDLASTLEDHEAGLNGESKSNGSSSQ---VRSVLTIAFQFAYEVHTRETCAVMARQYVRT 650

Query: 676 IIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           ++ASVQRVA+AL+PSR       RP  G+ +A +LAR I  SYR
Sbjct: 651 VVASVQRVAMALAPSR----GQPRPALGNSDAISLARHILSSYR 690


>gi|89514855|gb|ABD75302.1| class III homeodomain-leucine zipper protein C3HDZ1 [Psilotum
           nudum]
          Length = 827

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/709 (62%), Positives = 535/709 (75%), Gaps = 28/709 (3%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K +MD+GKYVRY+ EQVEALERLY+ECPKPS++RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 10  KGVMDSGKYVRYSNEQVEALERLYNECPKPSALRRQQLIRECPILSNIEPKQIKVWFQNR 69

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEA+RLQ VN KLTAMNKLLMEENDRLQKQV+QL+ EN + RQQ      L T
Sbjct: 70  RCREKQRKEAARLQTVNGKLTAMNKLLMEENDRLQKQVAQLLCENGYLRQQLPQGG-LTT 128

Query: 139 TDTSCESVVTSGQHHL-TPQQQHQHPPRDASP-AGLLSIAEETLTEFLSKATGTAVEWVQ 196
           TDTSC+SVVTSG  HL TPQ    HPP DA+  +G+LS+AEE L EFL KATGTA++W+Q
Sbjct: 129 TDTSCDSVVTSGLQHLPTPQ----HPPHDAATHSGILSLAEEALAEFLQKATGTAIDWIQ 184

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDS G++ ISHGCTGVAARAC LVGL+P +V EILKDRPSW+ DCR +  +  
Sbjct: 185 MPGMKPGPDSTGMINISHGCTGVAARACSLVGLEPAKVVEILKDRPSWHWDCRQLTKLYS 244

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
              G++GTIE+LYMQ+YAPTTLAPARDF  LRYTS LEDGS V+CERSLNNT   P+ P 
Sbjct: 245 SNVGNNGTIEVLYMQMYAPTTLAPARDFCTLRYTSPLEDGSYVICERSLNNTHGPPTAPH 304

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
              FVRAEMLP GYLIRPCEG GSI+ IVDHMDLE W+VPEVLRPLYESS  +A K T+ 
Sbjct: 305 MQSFVRAEMLPCGYLIRPCEGSGSILIIVDHMDLESWTVPEVLRPLYESSAALAHKITIP 364

Query: 377 ALRHLRQISQE--VSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           ALR+LR ++Q   V  P V    RRPAA+R+LSQRL+RGFN+A+NGF D+GW+ + SDG 
Sbjct: 365 ALRYLRHLAQAAGVEIPGV----RRPAAVRSLSQRLARGFNDAVNGFGDDGWTTVPSDGT 420

Query: 435 DDVTVHVNSS-PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSE 493
           DDVTV + S+  ++ +G Q      F S +  VLCAKASMLLQ+VPPA+L+RFLREHRSE
Sbjct: 421 DDVTVAIKSNYNARELGDQ------FTSGTAGVLCAKASMLLQNVPPALLVRFLREHRSE 474

Query: 494 WADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRE 553
           WAD    A S +A++     +          QV+    H +E +EFLE+IKLE      E
Sbjct: 475 WADYGAAANSTSALQINNFGILDTHGDVCISQVLQQPIHAVEDDEFLELIKLEGR---EE 531

Query: 554 DMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSG-KDT 612
              +P DIFLLQLCSG++EN  G  A++VFAPID S  DD P++PSGFR IPLD+   D 
Sbjct: 532 GSTLPRDIFLLQLCSGLEENTAGASAQMVFAPIDISIPDDVPLLPSGFRAIPLDNCLLDA 591

Query: 613 PSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQY 672
            SP+RTLDLAS L+VG T  K + ++       +SV+T+AFQF+F  H+QE+  +M+RQY
Sbjct: 592 GSPSRTLDLASTLDVGSTNGKYANNAVFH---LRSVLTLAFQFSFHSHMQESATTMSRQY 648

Query: 673 VRGIIASVQRVALALSPSRFGSNAG-LRPPPGSPEAHTLARWICQSYRC 720
           VR ++++VQR+A+AL+PSR   + G  R  PG+PE    ARWIC+SY+C
Sbjct: 649 VRNVVSTVQRLAMALAPSRLSPHMGSSRQMPGTPEGVNYARWICRSYKC 697


>gi|90110446|gb|ABD90525.1| class III homeodomain-leucine zipper [Psilotum nudum]
          Length = 829

 Score =  863 bits (2231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/709 (61%), Positives = 534/709 (75%), Gaps = 28/709 (3%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K +MD+GKYVRY+ EQVEALERLY+ECPKPS++RRQQLIRECPILSNIEPKQIKVWFQNR
Sbjct: 10  KGVMDSGKYVRYSNEQVEALERLYNECPKPSALRRQQLIRECPILSNIEPKQIKVWFQNR 69

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKEA+RLQ VN KLTAMNKLLMEENDRLQKQV+QL+ EN + RQQ      L T
Sbjct: 70  RCREKQRKEAARLQTVNGKLTAMNKLLMEENDRLQKQVAQLLRENGYLRQQLPQGG-LTT 128

Query: 139 TDTSCESVVTSGQHHL-TPQQQHQHPPRDASP-AGLLSIAEETLTEFLSKATGTAVEWVQ 196
           TDTSC+SVVTSG  HL TPQ    HPP DA+  +G+LS+AEE L EFL KATGTA++W+Q
Sbjct: 129 TDTSCDSVVTSGLQHLPTPQ----HPPHDAATHSGILSLAEEALAEFLQKATGTAIDWIQ 184

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDS G++ ISHGCTGVAARAC LVGL+P +V EILK RPSW+ DCR +  +  
Sbjct: 185 MPGMKPGPDSTGMINISHGCTGVAARACSLVGLEPAKVVEILKGRPSWHWDCRQLTKLYS 244

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
              G++GTIE+LYMQ+YAPTTLAPARDF  LRYTS LEDGS V+CERSLNNT   P+ P 
Sbjct: 245 SNVGNNGTIEVLYMQMYAPTTLAPARDFCTLRYTSPLEDGSYVICERSLNNTHGPPTAPH 304

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
              FVRAEMLP GYLIRPCEG GSI+ IVDHMDLE W+VPEVLRPLYESS  +A K T+ 
Sbjct: 305 MQSFVRAEMLPCGYLIRPCEGSGSILIIVDHMDLESWTVPEVLRPLYESSAALAHKITIP 364

Query: 377 ALRHLRQISQE--VSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           ALR+LR ++Q   V  P V    RRPAA+R+LSQRL+RGFN+A+NGF D+GW+ + SDG 
Sbjct: 365 ALRYLRHLAQAAGVEIPGV----RRPAAVRSLSQRLARGFNDAVNGFGDDGWTTVPSDGT 420

Query: 435 DDVTVHVNSS-PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSE 493
           DDVTV + S+  ++ +G Q      F S +  VLCAKASMLLQ+VPPA+L+RFLREHRSE
Sbjct: 421 DDVTVAIKSNYNARELGDQ------FTSGTAGVLCAKASMLLQNVPPALLVRFLREHRSE 474

Query: 494 WADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRE 553
           WAD    A S +A++     +          QV+    H +E +EFLE+IKLE      E
Sbjct: 475 WADYGAAANSTSALQINNFGILDTHGDVCISQVLQQPIHAVEDDEFLELIKLEGR---EE 531

Query: 554 DMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSG-KDT 612
              +P DIFLLQLCSG++EN  G  A++VFAPID S  DD P++PSGFR IPLD+   D 
Sbjct: 532 GSTLPRDIFLLQLCSGLEENTAGASAQMVFAPIDISIPDDVPLLPSGFRAIPLDNCLLDA 591

Query: 613 PSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQY 672
            SP+RTLDLAS L+VG T  K + ++       +SV+T+AFQF+F  H+QE+  +M+RQY
Sbjct: 592 GSPSRTLDLASTLDVGSTNGKYANNAVFH---LRSVLTLAFQFSFHSHMQESATTMSRQY 648

Query: 673 VRGIIASVQRVALALSPSRFGSNAG-LRPPPGSPEAHTLARWICQSYRC 720
           VR ++++VQR+A+AL+PSR   + G  R  PG+PE    ARWIC+SY+C
Sbjct: 649 VRNVVSTVQRLAMALAPSRLSPHMGSSRQMPGTPEGVNYARWICRSYKC 697


>gi|110349524|gb|ABG73237.1| class III HD-Zip protein HB12 [Physcomitrella patens]
          Length = 844

 Score =  863 bits (2231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/723 (61%), Positives = 541/723 (74%), Gaps = 31/723 (4%)

Query: 14  DSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKV 73
           D    K +  +GKYVRYT EQVEALER+YHECPKPSS+RR QLI+ECPIL+NIEPKQIKV
Sbjct: 5   DPDKYKGMDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKV 64

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN- 132
           WFQNRRCREKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  +N   RQQ  N 
Sbjct: 65  WFQNRRCREKQRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLDNHALRQQLPNL 124

Query: 133 -----------AATLATTDTSCESVVTSGQ-HHLTPQQQHQHPPRDASPAGLLSIAEETL 180
                       A +A+TDTSC+S VT G   HLT   QH  P  DASPAGLLS+AEETL
Sbjct: 125 PVPDGKCRLSGQAGVASTDTSCDSAVTGGLPQHLT--SQHSSP--DASPAGLLSMAEETL 180

Query: 181 TEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKD 240
           T+FL+KATGTAV+W+Q+PGMKPGPD+IGI+AISHGC G+AARACGL  LD ++VAEILKD
Sbjct: 181 TDFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGLAALDFSKVAEILKD 240

Query: 241 RPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           RP W +DCR +EV+  LPTG+ GTIELLY Q+YAPTTLAPARDF  LRYT++LEDG+LV+
Sbjct: 241 RPGWSQDCRRMEVLGTLPTGNGGTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVI 300

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 360
           CERSL    NGP+MP    F+RAEM PSGYLIRPCEGGG IIHIVDH++ EPWSVPEVLR
Sbjct: 301 CERSLTGKHNGPTMPPVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLR 360

Query: 361 PLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           PLYES  ++A K+T+AALR+LR+I+ E S   +   G+ PA +R LSQRL++GFN+A+NG
Sbjct: 361 PLYESPAVLAHKSTIAALRYLRRIAAEESGEIIIRNGQHPAVIRTLSQRLTKGFNDAVNG 420

Query: 421 FTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
           F D+GW  +ESDG+DDV+V +N++P  M G Q++      S+   +LCAKASMLLQ+VPP
Sbjct: 421 FGDDGWVPMESDGMDDVSVMLNATPKSMEG-QIATDKLLFSLGGGILCAKASMLLQNVPP 479

Query: 481 AILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFL 540
           A+L+RFLREHRSEWAD  IDA +A A + G  +  V R      Q+ LPLA   E  EFL
Sbjct: 480 ALLIRFLREHRSEWADHEIDANAATAFR-GASNGHVSRGRMSHVQLPLPLAQFGEQGEFL 538

Query: 541 EVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSG 600
           EV+KLE  +  +   ++  D FLLQLCSG++E AVG  A+LVFAPIDA+ S+D P++PSG
Sbjct: 539 EVVKLEGHSAVQHS-VLSRDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAVSEDIPLLPSG 597

Query: 601 FRIIPLDSG-KDTPSPNRTLDLASAL---EVGPTGNKASGDSSTQCGSTKSVITIAFQFA 656
           FR+IP+DS   D    NRTLDLAS L   E G  G   S  SS+Q    +SV+TIAFQFA
Sbjct: 598 FRVIPVDSSVVDGIGLNRTLDLASTLEDHEAGLNGESKSNGSSSQ---VRSVLTIAFQFA 654

Query: 657 FEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQ 716
           +E+H +E  A MARQYVR ++ASVQRVA+AL+PSR       RP  G+ +A +LAR I  
Sbjct: 655 YEVHTRETCAVMARQYVRTVVASVQRVAMALAPSR----GQPRPALGNSDAISLARHILS 710

Query: 717 SYR 719
           SYR
Sbjct: 711 SYR 713


>gi|89953822|gb|ABD75297.1| class III homeodomain-leucine zipper protein C3HDZ1 [Physcomitrella
           patens]
          Length = 833

 Score =  862 bits (2228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/716 (62%), Positives = 540/716 (75%), Gaps = 32/716 (4%)

Query: 22  MDN-GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 80
           MD+ GKYVRYT EQVEALER+YHECPKPSS+RR QLI+ECPIL+NIEPKQIKVWFQNRRC
Sbjct: 1   MDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWFQNRRC 60

Query: 81  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN-------- 132
           REKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  +N   RQQ  N        
Sbjct: 61  REKQRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLDNHALRQQLPNLPVPDGKC 120

Query: 133 ----AATLATTDTSCESVVTSGQ-HHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKA 187
                A +A+TDTSC+S VT G   HLT   QH  P  DASPAGLLS+AEETLT+FL+KA
Sbjct: 121 RLSGQAGVASTDTSCDSAVTGGLPQHLT--SQHSSP--DASPAGLLSMAEETLTDFLAKA 176

Query: 188 TGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD 247
           TGTAV+W+Q+PGMKPGPD+IGI+AISHGC G+AARACGL  LD ++VAEILKDRP W +D
Sbjct: 177 TGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWSQD 236

Query: 248 CRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN 307
           CR +EV+  LPTG+ GTIELLY Q+YAPTTLAPARDF  LRYT++LEDG+LV+CERSL  
Sbjct: 237 CRRMEVLGTLPTGNGGTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTG 296

Query: 308 TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 367
             NGP+MP    F+RAEM PSGYLIRPCEGGG IIHIVDH++ EPWSVPEVLRPLYES  
Sbjct: 297 KHNGPTMPPVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPA 356

Query: 368 LIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           ++A K+T+AALR+LR+I+ E S   +   G+ PA +R LSQRL++GFN+A+NGF D+GW 
Sbjct: 357 VLAHKSTIAALRYLRRIAAEESGEIIIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGWV 416

Query: 428 MLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL 487
            +ESDG+DDV+V +N++P  M G Q++      S+   +LCAKASMLLQ+VPPA+L+RFL
Sbjct: 417 PMESDGMDDVSVMLNATPKSMEG-QIATDKLLFSLGGGILCAKASMLLQNVPPALLIRFL 475

Query: 488 REHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLEN 547
           REHRSEWAD  IDA +A A + G  +  V R      Q+ LPLA   E  EFLEV+KLE 
Sbjct: 476 REHRSEWADHEIDANAATAFR-GASNGHVSRGRMSHVQLPLPLAQFGEQGEFLEVVKLEG 534

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
            +  +   ++  D FLLQLCSG++E AVG  A+LVFAPIDA+ S+D P++PSGFR+IP+D
Sbjct: 535 HSAVQHS-VLSRDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAVSEDIPLLPSGFRVIPVD 593

Query: 608 SG-KDTPSPNRTLDLASAL---EVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQE 663
           S   D    NRTLDLAS L   E G  G   S  SS+Q    +SV+TIAFQFA+E+H +E
Sbjct: 594 SSVVDGIGLNRTLDLASTLEDHEAGLNGESKSNGSSSQ---VRSVLTIAFQFAYEVHTRE 650

Query: 664 NVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
             A MARQYVR ++ASVQRVA+AL+PSR       RP  G+ +A +LAR I  SYR
Sbjct: 651 TCAVMARQYVRTVVASVQRVAMALAPSR----GQPRPALGNSDAISLARHILSSYR 702


>gi|90110438|gb|ABD90521.1| class III homeodomain-leucine zipper [Physcomitrella patens]
          Length = 737

 Score =  862 bits (2227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/716 (62%), Positives = 540/716 (75%), Gaps = 32/716 (4%)

Query: 22  MDN-GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 80
           MD+ GKYVRYT EQVEALER+YHECPKPSS+RR QLI+ECPIL+NIEPKQIKVWFQNRRC
Sbjct: 1   MDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWFQNRRC 60

Query: 81  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN-------- 132
           REKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  +N   RQQ  N        
Sbjct: 61  REKQRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLDNHALRQQLPNLPVPDGKC 120

Query: 133 ----AATLATTDTSCESVVTSG-QHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKA 187
                A +A+TDTSC+S VT G   HLT   QH  P  DASPAGLLS+AEETLT+FL+KA
Sbjct: 121 RLSGQAGVASTDTSCDSAVTGGLPQHLT--SQHSSP--DASPAGLLSMAEETLTDFLAKA 176

Query: 188 TGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD 247
           TGTAV+W+Q+PGMKPGPD+IGI+AISHGC G+AARACGL  LD ++VAEILKDRP W +D
Sbjct: 177 TGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWSQD 236

Query: 248 CRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN 307
           CR +EV+  LPTG+ GTIELLY Q+YAPTTLAPARDF  LRYT++LEDG+LV+CERSL  
Sbjct: 237 CRRMEVLGTLPTGNGGTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTG 296

Query: 308 TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 367
             NGP+MP    F+RAEM PSGYLIRPCEGGG IIHIVDH++ EPWSVPEVLRPLYES  
Sbjct: 297 KHNGPTMPPVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPA 356

Query: 368 LIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           ++A K+T+AALR+LR+I+ E S   +   G+ PA +R LSQRL++GFN+A+NGF D+GW 
Sbjct: 357 VLAHKSTIAALRYLRRIAAEESGEIIIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGWV 416

Query: 428 MLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL 487
            +ESDG+DDV+V +N++P  M G Q++      S+   +LCAKASMLLQ+VPPA+L+RFL
Sbjct: 417 PMESDGMDDVSVMLNATPKSMEG-QIATDKLLFSLGGGILCAKASMLLQNVPPALLIRFL 475

Query: 488 REHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLEN 547
           REHRSEWAD  IDA +A A + G  +  V R      Q+ LPLA   E  EFLEV+KLE 
Sbjct: 476 REHRSEWADHEIDANAATAFR-GASNGHVSRGRMSHVQLPLPLAQFGEQGEFLEVVKLEG 534

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
            +  +   ++  D FLLQLCSG++E AVG  A+LVFAPIDA+ S+D P++PSGFR+IP+D
Sbjct: 535 HSAVQHS-VLSRDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAVSEDIPLLPSGFRVIPVD 593

Query: 608 SG-KDTPSPNRTLDLASAL---EVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQE 663
           S   D    NRTLDLAS L   E G  G   S  SS+Q    +SV+TIAFQFA+E+H +E
Sbjct: 594 SSVVDGIGLNRTLDLASTLEDHEAGLNGESKSNGSSSQ---VRSVLTIAFQFAYEVHTRE 650

Query: 664 NVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
             A MARQYVR ++ASVQRVA+AL+PSR       RP  G+ +A +LAR I  SYR
Sbjct: 651 TCAVMARQYVRTVVASVQRVAMALAPSR----GQPRPALGNSDAISLARHILSSYR 702


>gi|168828707|gb|ACA33840.1| class III HD-Zip transcription factor HDZ31 [Pinus pinaster]
          Length = 628

 Score =  848 bits (2190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/555 (73%), Positives = 472/555 (85%), Gaps = 3/555 (0%)

Query: 167 ASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGL 226
           ASPAGLLSIAEETLTEFLSKA G AV+WVQMPGMKPGPDSIGIVAIS+ C GVAARACGL
Sbjct: 1   ASPAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIGIVAISNTCNGVAARACGL 60

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWL 286
           VGLDPT+VAEILKDRPSW RDCR ++V+   PTG+ GTIELLYMQ YA TTLA ARDFW 
Sbjct: 61  VGLDPTKVAEILKDRPSWLRDCRCLDVLTAFPTGNGGTIELLYMQTYAATTLASARDFWT 120

Query: 287 LRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVD 346
           LRYT+VLEDGSLVVCERSL+ TQ GPS+P   HFVRAEMLPSGYLI+PCEGGGSII IVD
Sbjct: 121 LRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFVRAEMLPSGYLIQPCEGGGSIIRIVD 180

Query: 347 HMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRAL 406
           HMDLEPWSVPEVLRPLYESST++AQK T+AALR LRQI+QE +   V GWGR+PA LR  
Sbjct: 181 HMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRRLRQIAQEATGEVVFGWGRQPAVLRTF 240

Query: 407 SQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAV 466
           SQRLSRGFNEA+NGFTD+GWS++ SDG++DVT+ +NSSP+K    Q++  NG  ++   +
Sbjct: 241 SQRLSRGFNEAVNGFTDDGWSLMGSDGVEDVTIAINSSPNKHFAYQVNASNGLTTLGGGI 300

Query: 467 LCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQ 525
           LCAKASMLLQ+VPPA+L+RFLREHRSEWADS+IDAYSAAA+K+ P S+P  RAG F G Q
Sbjct: 301 LCAKASMLLQNVPPALLVRFLREHRSEWADSNIDAYSAAALKSSPYSVPGSRAGGFSGSQ 360

Query: 526 VILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAP 585
           VILPLAHT+EHEEFLEVIKLE     +E+ ++  D+FLLQLCSG+DE+A G CAELVFAP
Sbjct: 361 VILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDEHAAGACAELVFAP 420

Query: 586 IDASFSDDAPIIPSGFRIIPLDSGKD-TPSPNRTLDLASALEVGPTGNKASGDSSTQCGS 644
           ID SF+DDAP++PSGFR+IPL+S  D +  PNRTLDLASALEVG TG + SGDS T   +
Sbjct: 421 IDESFADDAPLLPSGFRVIPLESRTDGSGGPNRTLDLASALEVGSTGTRTSGDSGTN-SN 479

Query: 645 TKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGS 704
            +SV+TIAFQF +E H +ENVA+MARQYVR ++ASVQRVA+AL+PSR  S+ G RPPPG+
Sbjct: 480 LRSVLTIAFQFTYESHSRENVAAMARQYVRSVVASVQRVAMALAPSRLNSHVGPRPPPGT 539

Query: 705 PEAHTLARWICQSYR 719
           PEA TLARWICQSYR
Sbjct: 540 PEALTLARWICQSYR 554


>gi|225449048|ref|XP_002274194.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Vitis
           vinifera]
          Length = 841

 Score =  844 bits (2180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/700 (60%), Positives = 523/700 (74%), Gaps = 27/700 (3%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           KYVRYT EQVEALER+Y ECPKPSS RRQQLIRECPILSNIE KQIKVWFQNRRCREKQ+
Sbjct: 28  KYVRYTAEQVEALERVYAECPKPSSTRRQQLIRECPILSNIESKQIKVWFQNRRCREKQK 87

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           KEA +LQ+VN+KL +MNKLLMEEN+RLQKQVSQLVYEN + +QQ QN  T  TTDT C+S
Sbjct: 88  KEAVQLQSVNKKLNSMNKLLMEENERLQKQVSQLVYENGYMKQQLQNV-TATTTDTRCDS 146

Query: 146 VVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGP 204
           +V       TPQ    H  R  + P GLLSIAEE + EFLSKA GTAV+WVQ+PGMKPGP
Sbjct: 147 LVA------TPQ----HSSRTGNNPIGLLSIAEEAMGEFLSKAKGTAVDWVQIPGMKPGP 196

Query: 205 DSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGT 264
           DS+G VAISH C GVAARAC LV L+PT + EILKDR SW+RDCR +EV    P G+ G 
Sbjct: 197 DSVGTVAISHSCNGVAARACSLVSLEPTEIMEILKDRQSWFRDCRKLEVFAKFPAGNGGI 256

Query: 265 IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE 324
           +EL+YMQ+YAPTTLAPARDFW LRYTS LEDGSLVVCERS++ +  GP+   A  FVRA+
Sbjct: 257 LELIYMQVYAPTTLAPARDFWTLRYTSSLEDGSLVVCERSMSGSGAGPNPSTASQFVRAK 316

Query: 325 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQI 384
           MLPSGYLIRPCEGGGSIIHIVDH+DLE WSVPEVL+PLY+SS L+AQK T+AAL H+RQI
Sbjct: 317 MLPSGYLIRPCEGGGSIIHIVDHLDLEAWSVPEVLQPLYKSSKLVAQKMTVAALHHIRQI 376

Query: 385 SQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS 444
           +QE S       G++PA LRA  Q+LSRGFN+A+NGF D+GWS+++ DG +D+ + VNS+
Sbjct: 377 AQETSGDVTHTLGKQPAVLRAFRQKLSRGFNDAINGFNDDGWSLMQIDGAEDLIISVNSA 436

Query: 445 PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSA 504
            +      +S      S+   +LC KA+MLLQ+V P++++RFLREHRSEWAD S+DAY+A
Sbjct: 437 KNLST---ISNSTAALSLPGGILCVKAAMLLQNVSPSLMVRFLREHRSEWADFSVDAYAA 493

Query: 505 AAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDM-IMPSDIF 562
           A+++    +LP      F G Q  + L  T E+ E LE+I+LE  A  +E+  +M  +I 
Sbjct: 494 ASLRGDSFALPGLSPSQFSGNQTTMSLGITAEN-EILEIIQLEGHALSQEEASVMWRNIH 552

Query: 563 LLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSG----KDTPSPNRT 618
           LLQ+C+GVD+NA   C+ELVF+PID  F DDAPI+ SGFRI+ LD+     +D  +  R 
Sbjct: 553 LLQICNGVDDNAGEACSELVFSPIDEMFPDDAPILSSGFRILELDAKTCDRQDMLAAKRM 612

Query: 619 LDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA 678
           ++LAS LEV  +       SS+    ++SV+ IAFQF FE HLQ NV +MARQY R +I+
Sbjct: 613 MNLASNLEVRSSDATGCTASSS---DSRSVLIIAFQFLFESHLQGNVVTMARQYARNVIS 669

Query: 679 SVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           SVQRVA+A++PS  G +   +   GSPEA TLARWICQSY
Sbjct: 670 SVQRVAMAITPS--GLHGRPKSTSGSPEALTLARWICQSY 707


>gi|296086017|emb|CBI31458.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score =  842 bits (2175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/700 (60%), Positives = 523/700 (74%), Gaps = 27/700 (3%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           KYVRYT EQVEALER+Y ECPKPSS RRQQLIRECPILSNIE KQIKVWFQNRRCREKQ+
Sbjct: 27  KYVRYTAEQVEALERVYAECPKPSSTRRQQLIRECPILSNIESKQIKVWFQNRRCREKQK 86

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           KEA +LQ+VN+KL +MNKLLMEEN+RLQKQVSQLVYEN + +QQ QN  T  TTDT C+S
Sbjct: 87  KEAVQLQSVNKKLNSMNKLLMEENERLQKQVSQLVYENGYMKQQLQNV-TATTTDTRCDS 145

Query: 146 VVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGP 204
           +V       TPQ    H  R  + P GLLSIAEE + EFLSKA GTAV+WVQ+PGMKPGP
Sbjct: 146 LVA------TPQ----HSSRTGNNPIGLLSIAEEAMGEFLSKAKGTAVDWVQIPGMKPGP 195

Query: 205 DSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGT 264
           DS+G VAISH C GVAARAC LV L+PT + EILKDR SW+RDCR +EV    P G+ G 
Sbjct: 196 DSVGTVAISHSCNGVAARACSLVSLEPTEIMEILKDRQSWFRDCRKLEVFAKFPAGNGGI 255

Query: 265 IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE 324
           +EL+YMQ+YAPTTLAPARDFW LRYTS LEDGSLVVCERS++ +  GP+   A  FVRA+
Sbjct: 256 LELIYMQVYAPTTLAPARDFWTLRYTSSLEDGSLVVCERSMSGSGAGPNPSTASQFVRAK 315

Query: 325 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQI 384
           MLPSGYLIRPCEGGGSIIHIVDH+DLE WSVPEVL+PLY+SS L+AQK T+AAL H+RQI
Sbjct: 316 MLPSGYLIRPCEGGGSIIHIVDHLDLEAWSVPEVLQPLYKSSKLVAQKMTVAALHHIRQI 375

Query: 385 SQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS 444
           +QE S       G++PA LRA  Q+LSRGFN+A+NGF D+GWS+++ DG +D+ + VNS+
Sbjct: 376 AQETSGDVTHTLGKQPAVLRAFRQKLSRGFNDAINGFNDDGWSLMQIDGAEDLIISVNSA 435

Query: 445 PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSA 504
            +      +S      S+   +LC KA+MLLQ+V P++++RFLREHRSEWAD S+DAY+A
Sbjct: 436 KNLST---ISNSTAALSLPGGILCVKAAMLLQNVSPSLMVRFLREHRSEWADFSVDAYAA 492

Query: 505 AAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDM-IMPSDIF 562
           A+++    +LP      F G Q  + L  T E+ E LE+I+LE  A  +E+  +M  +I 
Sbjct: 493 ASLRGDSFALPGLSPSQFSGNQTTMSLGITAEN-EILEIIQLEGHALSQEEASVMWRNIH 551

Query: 563 LLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSG----KDTPSPNRT 618
           LLQ+C+GVD+NA   C+ELVF+PID  F DDAPI+ SGFRI+ LD+     +D  +  R 
Sbjct: 552 LLQICNGVDDNAGEACSELVFSPIDEMFPDDAPILSSGFRILELDAKTCDRQDMLAAKRM 611

Query: 619 LDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA 678
           ++LAS LEV  +       SS+    ++SV+ IAFQF FE HLQ NV +MARQY R +I+
Sbjct: 612 MNLASNLEVRSSDATGCTASSS---DSRSVLIIAFQFLFESHLQGNVVTMARQYARNVIS 668

Query: 679 SVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           SVQRVA+A++PS  G +   +   GSPEA TLARWICQSY
Sbjct: 669 SVQRVAMAITPS--GLHGRPKSTSGSPEALTLARWICQSY 706


>gi|89514849|gb|ABD75299.1| class III homeodomain-leucine zipper protein HB10 [Physcomitrella
           patens]
 gi|110349520|gb|ABG73235.1| class III HD-Zip protein HB10 [Physcomitrella patens]
          Length = 880

 Score =  840 bits (2171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/758 (57%), Positives = 543/758 (71%), Gaps = 68/758 (8%)

Query: 22  MD-NGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 80
           MD +GKYVRYT EQVEALER+YHECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRC
Sbjct: 10  MDASGKYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRC 69

Query: 81  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN-------- 132
           REKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQQ  N        
Sbjct: 70  REKQRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRH 129

Query: 133 -----------------------------------AATLATTDTSCESVVTSG-QHHLTP 156
                                               A +A+TDTSC+S VT G  H LTP
Sbjct: 130 RLPSQILQSPLKKEGAVNGGDESSTQGGICVKVHGQAGIASTDTSCDSAVTGGLPHRLTP 189

Query: 157 QQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGC 216
           Q    H PRD+SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD+IGI+AISHGC
Sbjct: 190 Q----HSPRDSSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGC 245

Query: 217 TGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPT 276
            G+AARACGLV LD ++V E+LKDRP W +DCR +E++  LPTG+ GTIELLY Q+YAPT
Sbjct: 246 VGIAARACGLVALDISKVTEVLKDRPRWLQDCRRMEILGALPTGNGGTIELLYTQMYAPT 305

Query: 277 TLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCE 336
           TLAPARD+  LRYT++LEDG++V+CERSL+  Q GP+MP    FVR EM PSGYLIRPC+
Sbjct: 306 TLAPARDYCTLRYTTILEDGNVVICERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCD 365

Query: 337 GGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGW 396
           GGG IIH+VDH + EPWSVPEVLRPLYES  +++QK+T+AALRHLR+++ E S   V   
Sbjct: 366 GGGCIIHVVDHYNNEPWSVPEVLRPLYESPAVLSQKSTLAALRHLRRLAAEESGEGVPRN 425

Query: 397 GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYV 456
           G+ PA LR L QRL++GFN A+NGF D+GW    SDG+DDV+V +N++P  M G Q++  
Sbjct: 426 GQHPAVLRTLCQRLTKGFNNAVNGFPDDGWEATISDGLDDVSVMLNATPKSMEG-QIASD 484

Query: 457 NGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPV 516
               S+   +LCAKASMLLQ+VP ++L+RFLREHRSEWAD  IDA  A+    G  +  V
Sbjct: 485 KLLYSLGGGILCAKASMLLQNVPSSLLIRFLREHRSEWADYDIDANVASFRSNG--NGYV 542

Query: 517 PRAGNFGG-QVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAV 575
           PR G     Q+ LPLA++ E  E LEV+K+E  +  +  M++  D FLLQLCSGVDE+AV
Sbjct: 543 PRCGGVSHVQLPLPLAYSGESGEILEVVKVEGHSSVQH-MVLSRDTFLLQLCSGVDESAV 601

Query: 576 GNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSG-KDTPSPNRTLDLASALEVGPTGNKA 634
           G CA+LVFAP+D + +DD P++PSGF + P+D+   D    +RTLDLAS LE G    + 
Sbjct: 602 GACAQLVFAPVDVALADDIPLLPSGFCVSPIDTNVVDGFGLDRTLDLASTLE-GGNDLRL 660

Query: 635 SGD--SSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRF 692
           +GD  SS   G  +SV+TIAFQFA+E+H +E VA+MARQYVR ++ASVQ+VA+AL+PSR 
Sbjct: 661 NGDAKSSNSPGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRNVVASVQQVAMALAPSR- 719

Query: 693 GSNAGLRPP---PGSPEAHTLARWICQSYRCVFYFLFD 727
               G  PP   P +P+A +L R +  SYR  F+   D
Sbjct: 720 ----GAPPPRQVPSNPDALSLVRHVLSSYR--FHMGID 751


>gi|89514857|gb|ABD75303.1| class III homeodomain-leucine zipper protein C3HDZ2 [Psilotum
           nudum]
          Length = 819

 Score =  840 bits (2171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/710 (60%), Positives = 533/710 (75%), Gaps = 40/710 (5%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           G+  I   GKYVRYT EQV+ALE LY+ECPKPSS+RRQQLI+ECPILSNIEPKQIKVWFQ
Sbjct: 9   GKGGIDAAGKYVRYTTEQVDALESLYNECPKPSSLRRQQLIKECPILSNIEPKQIKVWFQ 68

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL 136
           NRRCREKQRKEASRLQ VN KLTAMNKLLMEENDRLQKQV+QL+YEN + RQQ Q+    
Sbjct: 69  NRRCREKQRKEASRLQNVNAKLTAMNKLLMEENDRLQKQVAQLLYENGYIRQQLQHGGI- 127

Query: 137 ATTDTSCESVVTSGQHHL-TPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV 195
            TTDTSC+SVVTSG  HL TPQ    HP  DA+ +G+LS+AEETLTEFL KATGTA++W+
Sbjct: 128 -TTDTSCDSVVTSGLQHLSTPQ----HPQTDAAHSGILSLAEETLTEFLGKATGTAIDWI 182

Query: 196 QMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVN 255
           QMPGMKPGPD  G+V ISHGC GVAARACGLVGL+P RV E+LKDRPSW+RDCR +  + 
Sbjct: 183 QMPGMKPGPDMTGMVNISHGCPGVAARACGLVGLEPARVVEVLKDRPSWHRDCRQLATLY 242

Query: 256 VLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 315
              T ++G +E+LYMQ+YAPTTLAPARDF  LRYTS+LEDGS V+CERSLN T   P+ P
Sbjct: 243 ATNTNNNGKMEVLYMQMYAPTTLAPARDFCTLRYTSLLEDGSYVICERSLNGTLGVPTAP 302

Query: 316 QAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTM 375
               FVRAEM PSGYLIRPCEG GS+I IVDHMDLEPW+VPEVLRPLYESS ++A K T+
Sbjct: 303 PMQSFVRAEMHPSGYLIRPCEGSGSVIIIVDHMDLEPWTVPEVLRPLYESSAILAHKITI 362

Query: 376 AALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID 435
            A+RHL+Q++Q+ +   V G  ++P A+ +LSQRL+RGFN+A+NGF D+GW+ + ++G+D
Sbjct: 363 EAMRHLQQLAQQAA-IEVPGGVQQPPAVWSLSQRLARGFNDAVNGFADDGWTSVSNEGMD 421

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWA 495
           DVTV V S+P    G +LS           VLCAKASMLLQ+VPP +L+RFLREHRSEWA
Sbjct: 422 DVTVIVKSNPK---GRELS-----------VLCAKASMLLQNVPPGLLVRFLREHRSEWA 467

Query: 496 DSSIDA----YSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHY 551
           D++ +     +S   + +GPC         +  Q++ P     + +EFLE++K E   H 
Sbjct: 468 DNNSETNALRFSNLGI-SGPC------GDVYNSQILQPQFPADQRDEFLELLKFEGPQH- 519

Query: 552 REDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPL-DSGK 610
               +   D+FLLQLCSG++E+A G  A++VFAPID+S SDD  ++PSGFR+IPL +S  
Sbjct: 520 --GTLSSMDMFLLQLCSGIEESAAGASAQIVFAPIDSSISDDVLLLPSGFRVIPLENSSL 577

Query: 611 DTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMAR 670
              +P RTLDLAS LE+G  G K + D+     + +SV+TIAFQF FE H+QE VA+MAR
Sbjct: 578 GGGTPTRTLDLASTLEIGLGGCKHANDNPML--NLRSVLTIAFQFTFESHIQEKVATMAR 635

Query: 671 QYVRGIIASVQRVALALSPSRFGS-NAGLRPPPGSPEAHTLARWICQSYR 719
           QYVR + +SVQ++A+ALSP    + +A LR   GSP+   L  W+CQSYR
Sbjct: 636 QYVRSVASSVQQIAMALSPCCMDTPSAPLRKMAGSPKGLALVHWMCQSYR 685


>gi|168024520|ref|XP_001764784.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|90110442|gb|ABD90523.1| class III homeodomain-leucine zipper [Physcomitrella patens]
 gi|162684078|gb|EDQ70483.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  840 bits (2170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/758 (57%), Positives = 543/758 (71%), Gaps = 68/758 (8%)

Query: 22  MD-NGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 80
           MD +GKYVRYT EQVEALER+YHECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRC
Sbjct: 1   MDASGKYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRC 60

Query: 81  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN-------- 132
           REKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQQ  N        
Sbjct: 61  REKQRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRH 120

Query: 133 -----------------------------------AATLATTDTSCESVVTSG-QHHLTP 156
                                               A +A+TDTSC+S VT G  H LTP
Sbjct: 121 RLPSQILQSPLKKEGAVNGGDESSTQGGICVKVHGQAGIASTDTSCDSAVTGGLPHRLTP 180

Query: 157 QQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGC 216
           Q    H PRD+SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD+IGI+AISHGC
Sbjct: 181 Q----HSPRDSSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGC 236

Query: 217 TGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPT 276
            G+AARACGLV LD ++V E+LKDRP W +DCR +E++  LPTG+ GTIELLY Q+YAPT
Sbjct: 237 VGIAARACGLVALDISKVTEVLKDRPRWLQDCRRMEILGALPTGNGGTIELLYTQMYAPT 296

Query: 277 TLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCE 336
           TLAPARD+  LRYT++LEDG++V+CERSL+  Q GP+MP    FVR EM PSGYLIRPC+
Sbjct: 297 TLAPARDYCTLRYTTILEDGNVVICERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCD 356

Query: 337 GGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGW 396
           GGG IIH+VDH + EPWSVPEVLRPLYES  +++QK+T+AALRHLR+++ E S   V   
Sbjct: 357 GGGCIIHVVDHYNNEPWSVPEVLRPLYESPAVLSQKSTLAALRHLRRLAAEESGEGVPRN 416

Query: 397 GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYV 456
           G+ PA LR L QRL++GFN A+NGF D+GW    SDG+DDV+V +N++P  M G Q++  
Sbjct: 417 GQHPAVLRTLCQRLTKGFNNAVNGFPDDGWEATISDGLDDVSVMLNATPKSMEG-QIASD 475

Query: 457 NGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPV 516
               S+   +LCAKASMLLQ+VP ++L+RFLREHRSEWAD  IDA  A+    G  +  V
Sbjct: 476 KLLYSLGGGILCAKASMLLQNVPSSLLIRFLREHRSEWADYDIDANVASFRSNG--NGYV 533

Query: 517 PRAGNFGG-QVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAV 575
           PR G     Q+ LPLA++ E  E LEV+K+E  +  +  M++  D FLLQLCSGVDE+AV
Sbjct: 534 PRCGGVSHVQLPLPLAYSGESGEILEVVKVEGHSSVQH-MVLSRDTFLLQLCSGVDESAV 592

Query: 576 GNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSG-KDTPSPNRTLDLASALEVGPTGNKA 634
           G CA+LVFAP+D + +DD P++PSGF + P+D+   D    +RTLDLAS LE G    + 
Sbjct: 593 GACAQLVFAPVDVALADDIPLLPSGFCVSPIDTNVVDGFGLDRTLDLASTLE-GGNDLRL 651

Query: 635 SGD--SSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRF 692
           +GD  SS   G  +SV+TIAFQFA+E+H +E VA+MARQYVR ++ASVQ+VA+AL+PSR 
Sbjct: 652 NGDAKSSNSPGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRNVVASVQQVAMALAPSR- 710

Query: 693 GSNAGLRPP---PGSPEAHTLARWICQSYRCVFYFLFD 727
               G  PP   P +P+A +L R +  SYR  F+   D
Sbjct: 711 ----GAPPPRQVPSNPDALSLVRHVLSSYR--FHMGID 742


>gi|7209912|dbj|BAA92366.1| homeobox protein PpHB10 [Physcomitrella patens]
          Length = 880

 Score =  837 bits (2163), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/758 (57%), Positives = 543/758 (71%), Gaps = 68/758 (8%)

Query: 22  MD-NGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 80
           MD +GKYVRYT EQVEALER+YHECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRC
Sbjct: 10  MDASGKYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRC 69

Query: 81  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN-------- 132
           REKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQQ  N        
Sbjct: 70  REKQRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRH 129

Query: 133 -----------------------------------AATLATTDTSCESVVTSG-QHHLTP 156
                                               A +A+TDTSC+S VT G  H LTP
Sbjct: 130 RLPSQILQSPLKKEGAVNGGDESSTQGGICVKVHGQAGIASTDTSCDSAVTGGLPHRLTP 189

Query: 157 QQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGC 216
           Q    H PRD+SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD+IGI+AISHGC
Sbjct: 190 Q----HSPRDSSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGC 245

Query: 217 TGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPT 276
            G+AARACGLV LD ++V E+LKDRP W +DCR +E++  LPTG+ GTIELLY Q+YAPT
Sbjct: 246 VGIAARACGLVALDISKVTEVLKDRPRWLQDCRRMEILGALPTGNGGTIELLYTQMYAPT 305

Query: 277 TLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCE 336
           TLAPARD+  LRYT++LEDG++V+CERSL+  Q GP+MP    FVR EM PSGYLIRPC+
Sbjct: 306 TLAPARDYCTLRYTTILEDGNVVICERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCD 365

Query: 337 GGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGW 396
           GGG IIH+VDH + EP SVPEVLRPLYES  +++QK+T+AALRHLR+++ E S   V   
Sbjct: 366 GGGCIIHVVDHYNNEPRSVPEVLRPLYESPAVLSQKSTLAALRHLRRLAAEESGEGVPRN 425

Query: 397 GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYV 456
           G+ PA LR L QRL++GFN A+NGF D+GW    SDG+DDV+V +N++P  M G Q++  
Sbjct: 426 GQHPAVLRTLCQRLTKGFNNAVNGFPDDGWEATISDGLDDVSVMLNATPKSMEG-QIASD 484

Query: 457 NGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPV 516
               S+   +LCAKASMLLQ+VPP++L+RFLREHRSEWAD  IDA  A+    G  +  V
Sbjct: 485 KLLYSLGGGILCAKASMLLQNVPPSLLIRFLREHRSEWADYDIDANVASFRSNG--NGYV 542

Query: 517 PRAGNFGG-QVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAV 575
           PR G     Q+ LPLA++ E  E LEV+K+E  +  +  M++  D FLLQLCSGVDE+AV
Sbjct: 543 PRCGGVSHVQLPLPLAYSGESGEILEVVKVEGHSSVQH-MVLSRDTFLLQLCSGVDESAV 601

Query: 576 GNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSG-KDTPSPNRTLDLASALEVGPTGNKA 634
           G CA+LVFAP+D + +DD P++P GF + P+D+   D    +RTLDLAS LE G    ++
Sbjct: 602 GACAQLVFAPVDVALADDIPLLPPGFCVSPIDTNVVDGFGLDRTLDLASTLE-GGNDLRS 660

Query: 635 SGD--SSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRF 692
           +GD  SS   G  +SV+TIAFQFA+E+H +E VA+MARQYVR ++ASVQ+VA+AL+PSR 
Sbjct: 661 NGDAKSSNSPGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRNVVASVQQVAMALAPSR- 719

Query: 693 GSNAGLRPP---PGSPEAHTLARWICQSYRCVFYFLFD 727
               G  PP   P +P+A +L R +  SYR  F+   D
Sbjct: 720 ----GAPPPRQVPSNPDALSLVRHVLSSYR--FHMGID 751


>gi|414864316|tpg|DAA42873.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 602

 Score =  834 bits (2155), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/613 (67%), Positives = 478/613 (77%), Gaps = 25/613 (4%)

Query: 2   MAVSSGGSRDSRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE 59
           MA +      S DSGG   +  MD+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RE
Sbjct: 1   MAAAVAMRGGSSDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRE 60

Query: 60  CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           CPILSNIEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQL
Sbjct: 61  CPILSNIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQL 120

Query: 120 VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPP---RDAS-PAGLLSI 175
           V+EN   RQQ QN  T    DTSCES VT+             PP   RDAS P+GLL+I
Sbjct: 121 VHENAHMRQQLQN--TSLANDTSCESNVTA-------------PPNAIRDASNPSGLLAI 165

Query: 176 AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVA 235
           AEET TEFLSKATGTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+V 
Sbjct: 166 AEETFTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVI 225

Query: 236 EILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLED 295
           EILKDRPSW+RDCRS+EV  + P G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ +ED
Sbjct: 226 EILKDRPSWFRDCRSLEVFTMFPAGNGGTIELIYMQMYAPTTLVPARDFWTLRYTTTMED 285

Query: 296 GSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 355
           GSLVVCERSL  +  GP+   A  FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSV
Sbjct: 286 GSLVVCERSLTGSGGGPNAASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSV 345

Query: 356 PEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFN 415
           PEVLRPLYESS ++AQK T  ALRHLRQI+QE S   V   GR+PA LR  SQRLSRGFN
Sbjct: 346 PEVLRPLYESSRVVAQKMTTVALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFN 405

Query: 416 EALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLL 475
           +A++GF D+GWS++  DGI+DV V  NS+             G P     ++CAKASMLL
Sbjct: 406 DAISGFNDDGWSVMGGDGIEDVVVACNSTKKIRNNSNAGITFGAP---GGIICAKASMLL 462

Query: 476 QDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTI 534
           Q VPPA+L+RFLREHRSEWAD +IDAY A+++K   CSLP  R   F GGQ+I+PLAHT+
Sbjct: 463 QSVPPAVLVRFLREHRSEWADYNIDAYLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTV 522

Query: 535 EHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDA 594
           E+EE LEV++LE      ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F DDA
Sbjct: 523 ENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDA 582

Query: 595 PIIPSGFRIIPLD 607
           P+I SGFR+IPLD
Sbjct: 583 PLISSGFRVIPLD 595


>gi|110349522|gb|ABG73236.1| class III HD-Zip protein HB11 [Physcomitrella patens]
          Length = 880

 Score =  829 bits (2141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/755 (56%), Positives = 541/755 (71%), Gaps = 62/755 (8%)

Query: 13  RDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 72
           ++S  ++ +  +GKYVRYT EQVEALER+YHECPKPSS+RR QLI+E PIL+NIEPKQIK
Sbjct: 6   KESWNEQTMDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIK 65

Query: 73  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ--- 129
           VWFQNRRCREKQRKEASRL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQQ   
Sbjct: 66  VWFQNRRCREKQRKEASRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQLPG 125

Query: 130 -----------TQNA--------------------------ATLATTDTSCESVVTSGQ- 151
                      +QNA                          A +A+TDTSC+S VT G  
Sbjct: 126 LPLTDGRHRLSSQNALKKEGAVNGGDESSTQGGICVRIHGQAGVASTDTSCDSAVTGGLP 185

Query: 152 HHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVA 211
           H LTPQ    H PRD SPAGLL+IAEETLT+FL+KATGTAV+W+Q+PGMKPGPD+IGI+A
Sbjct: 186 HRLTPQ----HSPRDTSPAGLLAIAEETLTDFLAKATGTAVDWIQLPGMKPGPDAIGIIA 241

Query: 212 ISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQ 271
           ISHGC G+AARACGLV LD ++V E+LKDRP+W +DCR +EV+ VLPT + GTIELLY Q
Sbjct: 242 ISHGCVGIAARACGLVALDASKVTEVLKDRPAWQQDCRRMEVLGVLPTANGGTIELLYTQ 301

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           +YAPTTLA ARD+  LRYT++LEDG+LV+CERSL   QNGP MP    FVR EM PSGYL
Sbjct: 302 MYAPTTLASARDYCTLRYTTILEDGNLVICERSLIGGQNGPPMPPVQSFVRGEMFPSGYL 361

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQP 391
           IRP +GGG IIH+VDH D E WSVPEVLRPLYES  ++AQ++T+AALRHLR+++ E S  
Sbjct: 362 IRPSDGGGCIIHVVDHYDNERWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLASEESGE 421

Query: 392 SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGV 451
                G+ P  LR LSQRL++GF  A+NGF D+GW    SDG++DV+V +N++P  M G 
Sbjct: 422 GNPRNGQHPVVLRTLSQRLAKGFKNAVNGFGDDGWVSTVSDGLEDVSVMLNATPKSMEG- 480

Query: 452 QLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGP 511
           Q++      S+   +LCAKASMLLQ+V P++L+ FLREHRSEWAD  IDA  A + ++  
Sbjct: 481 QIASDKLLYSLGGGILCAKASMLLQNVSPSLLIGFLREHRSEWADFDIDANVATSFRSNG 540

Query: 512 CSLPVPRAGNFGG-QVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGV 570
            S    R G     Q+ LPLAH+ EH E LEV+KLE  +  +  M++  D FLLQLCSG+
Sbjct: 541 NSY--ARGGGVSHVQLPLPLAHSGEHGEILEVVKLEGHSSVQH-MVLSRDSFLLQLCSGI 597

Query: 571 DENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDS----GKDTPSPNRTLDLASALE 626
           DENAVG  A+L+FAP+D + ++D P++PSGF + P+D+    G D    +RTLDLAS LE
Sbjct: 598 DENAVGASAQLIFAPVDVALAEDIPLLPSGFCVSPIDASVVGGFDL---DRTLDLASTLE 654

Query: 627 VGPTGNKASGDSSTQ--CGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVA 684
            G +  + +GD+ +    G  +SV+TIAFQFA+E+H +E  A MARQYVR ++ASVQRVA
Sbjct: 655 -GGSDLRLNGDTKSNGTSGQMRSVLTIAFQFAYEVHTRETCAVMARQYVRTVVASVQRVA 713

Query: 685 LALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +AL+PSR  + A LR  P +P+A +L R +  SYR
Sbjct: 714 MALAPSR--APAPLRQAPSNPDAISLVRHVLSSYR 746


>gi|325651485|dbj|BAJ83628.1| class III HD-Zip protein [Cabomba caroliniana]
          Length = 703

 Score =  828 bits (2139), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/654 (64%), Positives = 503/654 (76%), Gaps = 7/654 (1%)

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQ 128
           KQIKVWFQNRR REKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN   + 
Sbjct: 1   KQIKVWFQNRRRREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGNMKH 60

Query: 129 QTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKA 187
           Q      L TTDTSCESVVTSGQH   P    QHPPR  S PAGLLSIAE TL EFLSKA
Sbjct: 61  QLHTP--LMTTDTSCESVVTSGQHQ--PNTSTQHPPRGTSNPAGLLSIAEVTLAEFLSKA 116

Query: 188 TGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD 247
           TGT+V+WVQM GMKPGPDS+GIVA+S    GVAARACGLV L+P++VAEILKDR SWYRD
Sbjct: 117 TGTSVDWVQMLGMKPGPDSVGIVAVSRNSNGVAARACGLVSLEPSKVAEILKDRMSWYRD 176

Query: 248 CRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN 307
           CRS++V+ VLP+G+ GTIEL+YMQ YAPTTLA ARDFW LRYT  +EDGSLVVC+RSL  
Sbjct: 177 CRSLDVLTVLPSGNGGTIELIYMQTYAPTTLASARDFWTLRYTIGMEDGSLVVCQRSLTA 236

Query: 308 TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 367
           +  GPS    P+FVRAEMLPSG LIRPCE GGS +HIVDH+DL+ WSVPEVLRPLYESS 
Sbjct: 237 STGGPSGSTTPNFVRAEMLPSGCLIRPCEVGGSTVHIVDHIDLDAWSVPEVLRPLYESSK 296

Query: 368 LIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           ++AQK T+ ALRH+RQ++ E S  +    GR+PA LR  SQRLSRGFN+A+N F+++GWS
Sbjct: 297 ILAQKMTLVALRHIRQVAHETSDEAGYSTGRQPAVLRTFSQRLSRGFNDAVNCFSEDGWS 356

Query: 428 MLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL 487
           ++ SDG++DVT+ VN+SPSK +    S           VLCAKASMLLQ+VPPAIL+RFL
Sbjct: 357 LMNSDGVEDVTIAVNASPSKNLVGHFSSTMPLLVSGGGVLCAKASMLLQNVPPAILVRFL 416

Query: 488 REHRSEWADSSIDAYSAAAVKAGPCSL--PVPRAGNFGGQVILPLAHTIEHEEFLEVIKL 545
           REHRSEWAD  IDA+SAA+ K  PC    P   +G  GGQ  LPL H ++ EE LEVI+L
Sbjct: 417 REHRSEWADCGIDAFSAASFKGNPCDFGGPTNFSGLSGGQTALPLGHMLDKEELLEVIRL 476

Query: 546 ENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
           E         ++PSD++LLQLCSG+DENA G CA+LVFAPID +F+DDAP++PSGFR+I 
Sbjct: 477 EGHGFSPVAGVLPSDMYLLQLCSGIDENAAGACAQLVFAPIDETFADDAPLLPSGFRVIS 536

Query: 606 LDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENV 665
           L+   D PS NRTLDLAS LE+G   N+A  D++    S +SV+TIAFQF +E HL++ V
Sbjct: 537 LEPKTDIPSLNRTLDLASTLELGSGANRAHSDNAANSYSFRSVLTIAFQFTYENHLRDTV 596

Query: 666 ASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           A+MARQYVR +++SVQRVA+A+ PSR  S    +    SPEA TLARW  +SYR
Sbjct: 597 AAMARQYVRSVVSSVQRVAMAIVPSRLSSLDSSKSFSRSPEALTLARWTSRSYR 650


>gi|110349528|gb|ABG73239.1| class III HD-Zip protein HB14 [Physcomitrella patens]
          Length = 875

 Score =  825 bits (2132), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/759 (56%), Positives = 536/759 (70%), Gaps = 66/759 (8%)

Query: 18  QKMIMD-NGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           ++  MD +GKYVRYT EQVEALER+YHECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQ
Sbjct: 6   KEQTMDASGKYVRYTNEQVEALERVYHECPKPSSVRRHQLIKESPILANIEPKQIKVWFQ 65

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN---- 132
           NRRCREKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQQ  N    
Sbjct: 66  NRRCREKQRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFP 125

Query: 133 ------------------------------------AATLATTDTSCESVVTSG-QHHLT 155
                                                A +A+TDTSC+S VT G  H +T
Sbjct: 126 DGRHRLPSHSPLKIEGAVNGGDESSTQGGICVKLPGQAGVASTDTSCDSAVTGGLPHRVT 185

Query: 156 PQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHG 215
           PQ    H PRD SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD+IGI+AISHG
Sbjct: 186 PQ----HSPRDTSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHG 241

Query: 216 CTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAP 275
           C G+AARACGLV LD ++V E+LKDRP+W +DCR +EV+  L T + GTIELLY Q+YAP
Sbjct: 242 CVGIAARACGLVALDASKVTEVLKDRPAWLQDCRRMEVLGALSTANGGTIELLYTQMYAP 301

Query: 276 TTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPC 335
           TTLAPARD+  LRYT++LEDG+LV+CERSL   Q G +MP    FVR EM  SGYLIRPC
Sbjct: 302 TTLAPARDYCTLRYTTILEDGNLVICERSLTGGQGGHTMPPVQSFVRGEMYSSGYLIRPC 361

Query: 336 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTG 395
           EGGG IIH+VDH D EPW VPEVLRPLYES  ++AQK+T+ ALRHLR+++ E S   V  
Sbjct: 362 EGGGCIIHVVDHYDKEPWRVPEVLRPLYESPAVLAQKSTIGALRHLRRLAAEESGEGVPR 421

Query: 396 WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSY 455
            G  PA LR L QRL++GFN+A+NGF D+GW    +DG+DDV+V VN++P  M G Q++ 
Sbjct: 422 NGHHPAVLRILGQRLTKGFNDAVNGFGDDGWETTVTDGLDDVSVMVNATPKSMEG-QIAS 480

Query: 456 VNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLP 515
                S+   +LCAKASMLLQ+VPP++L+RFLREHRSEWAD  +D  ++           
Sbjct: 481 DKLLYSLGGGILCAKASMLLQNVPPSLLIRFLREHRSEWADYDMDDMASFRSNGNGY--- 537

Query: 516 VPRAGNFGG-QVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENA 574
           VPR G     Q+ LPLA + E  E LEV+KLE  +  +  M++  DIFLLQLCSG+DE+A
Sbjct: 538 VPRGGGVSHVQLPLPLAQSGECGEILEVVKLEGHSSVQH-MVLSRDIFLLQLCSGIDESA 596

Query: 575 VGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSG-KDTPSPNRTLDLASALEVGPTGNK 633
           +G C++L+FAP+D + +D  P++PSGF + P+D+   D    +RTLDLAS LE G    +
Sbjct: 597 LGACSQLIFAPVDVALADGIPLLPSGFCVSPIDTNVVDGFGLDRTLDLASTLE-GGNDLR 655

Query: 634 ASGD--SSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSR 691
            +GD  S++  G  +SV+TIAFQFA+E+H +E VA+MARQYVR ++ASVQRVA+AL+PSR
Sbjct: 656 LNGDVKSNSSSGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRTVVASVQRVAMALAPSR 715

Query: 692 FGSNAGLRPP---PGSPEAHTLARWICQSYRCVFYFLFD 727
                G  PP   P +P+A +LA  +  SYR  F+   D
Sbjct: 716 -----GAAPPRQAPSNPDALSLACHVLSSYR--FHLGID 747


>gi|168020051|ref|XP_001762557.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686290|gb|EDQ72680.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 873

 Score =  824 bits (2129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/753 (57%), Positives = 536/753 (71%), Gaps = 69/753 (9%)

Query: 22  MDN-GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 80
           MD+ GKYVRYT EQVEALER+YHECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRC
Sbjct: 1   MDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRC 60

Query: 81  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQT---------- 130
           REKQRKEASRL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQQ           
Sbjct: 61  REKQRKEASRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQLPGLPLTDGRH 120

Query: 131 ----------QNA--------------------------ATLATTDTSCESVVTSGQ-HH 153
                     QNA                          A +A+TDTSC+S VT G  H 
Sbjct: 121 RLSSQATSVLQNALKKEGAVNGGDESSTQGGICVRIHGQAGVASTDTSCDSAVTGGLPHR 180

Query: 154 LTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAIS 213
           LTPQ    H PRD SPAGLL+IAEETLT+FL+KATGTAV+W+Q+PGMKPGPD+IGI+AIS
Sbjct: 181 LTPQ----HSPRDTSPAGLLAIAEETLTDFLAKATGTAVDWIQLPGMKPGPDAIGIIAIS 236

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLY 273
           HGC G+AARACGLV LD ++V E+LKDRP+W +DCR +EV+ VLPT + GTIELLY Q+Y
Sbjct: 237 HGCVGIAARACGLVALDASKVTEVLKDRPAWQQDCRRMEVLGVLPTANGGTIELLYTQMY 296

Query: 274 APTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIR 333
           APTTLA ARD+  LRYT++LEDG+LV+CERSL   QNGP MP    FVR EM PSGYLIR
Sbjct: 297 APTTLASARDYCTLRYTTILEDGNLVICERSLIGGQNGPPMPPVQSFVRGEMFPSGYLIR 356

Query: 334 PCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSV 393
           P +GGG IIH+VDH D E WSVPEVLRPLYES  ++AQ++T+AALRHLR+++ E S    
Sbjct: 357 PSDGGGCIIHVVDHYDNERWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLASEESGEGN 416

Query: 394 TGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQL 453
              G+ P  LR LSQRL++GF  A+NGF D+GW    SDG++DV+V +N++P  M G Q+
Sbjct: 417 PRNGQHPVVLRTLSQRLAKGFKNAVNGFGDDGWVSTVSDGLEDVSVMLNATPKSMEG-QI 475

Query: 454 SYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCS 513
           +      S+   +LCAKASMLLQ+V P++L+ FLREHRSEWAD  IDA  A + ++   S
Sbjct: 476 ASDKLLYSLGGGILCAKASMLLQNVSPSLLIGFLREHRSEWADFDIDANVATSFRSNGNS 535

Query: 514 LPVPRAGNFGG-QVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDE 572
               R G     Q+ LPLAH+ EH E LEV+KLE  +  +  M++  D FLLQLCSG+DE
Sbjct: 536 Y--ARGGGVSHVQLPLPLAHSGEHGEILEVVKLEGHSSVQH-MVLSRDSFLLQLCSGIDE 592

Query: 573 NAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDS----GKDTPSPNRTLDLASALEVG 628
           NAVG  A+L+FAP+D + ++D P++PSGF + P+D+    G D    +RTLDLAS LE G
Sbjct: 593 NAVGASAQLIFAPVDVALAEDIPLLPSGFCVSPIDASVVGGFDL---DRTLDLASTLE-G 648

Query: 629 PTGNKASGDSSTQ--CGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALA 686
            +  + +GD+ +    G  +SV+TIAFQFA+E+H +E  A MARQYVR ++ASVQRVA+A
Sbjct: 649 GSDLRLNGDTKSNGTSGQMRSVLTIAFQFAYEVHTRETCAVMARQYVRTVVASVQRVAMA 708

Query: 687 LSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           L+PSR  + A LR  P +P+A +L R +  SYR
Sbjct: 709 LAPSR--APAPLRQAPSNPDAISLVRHVLSSYR 739


>gi|168045580|ref|XP_001775255.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673468|gb|EDQ59991.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 870

 Score =  824 bits (2129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/759 (56%), Positives = 534/759 (70%), Gaps = 70/759 (9%)

Query: 22  MD-NGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 80
           MD +GKYVRYT EQVEALER+YHECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRC
Sbjct: 1   MDASGKYVRYTNEQVEALERVYHECPKPSSVRRHQLIKESPILANIEPKQIKVWFQNRRC 60

Query: 81  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN-------- 132
           REKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQQ  N        
Sbjct: 61  REKQRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRH 120

Query: 133 ------------------------------------AATLATTDTSCESVVTSGQ-HHLT 155
                                                A +A+TDTSC+S VT G  H +T
Sbjct: 121 RLPSHVNLQSPLKIEGAVNGGDESSTQGGICVKLPGQAGVASTDTSCDSAVTGGLPHRVT 180

Query: 156 PQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHG 215
           PQ    H PRD SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD+IGI+AISHG
Sbjct: 181 PQ----HSPRDTSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHG 236

Query: 216 CTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAP 275
           C G+AARACGLV LD ++V E+LKDRP+W +DCR +EV+  L T + GTIELLY Q+YAP
Sbjct: 237 CVGIAARACGLVALDASKVTEVLKDRPAWLQDCRRMEVLGALSTANGGTIELLYTQMYAP 296

Query: 276 TTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPC 335
           TTLAPARD+  LRYT++LEDG+LV+CERSL   Q G +MP    FVR EM  SGYLIRPC
Sbjct: 297 TTLAPARDYCTLRYTTILEDGNLVICERSLTGGQGGHTMPPVQSFVRGEMYSSGYLIRPC 356

Query: 336 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTG 395
           EGGG IIH+VDH D EPW VPEVLRPLYES  ++AQK+T+ ALRHLR+++ E S   V  
Sbjct: 357 EGGGCIIHVVDHYDKEPWRVPEVLRPLYESPAVLAQKSTIGALRHLRRLAAEESGEGVPR 416

Query: 396 WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSY 455
            G  PA LR L QRL++GFN+A+NGF D+GW    +DG+DDV+V VN++P  M G Q++ 
Sbjct: 417 NGHHPAVLRILGQRLTKGFNDAVNGFGDDGWETTVTDGLDDVSVMVNATPKSMEG-QIAS 475

Query: 456 VNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLP 515
                S+   +LCAKASMLLQ+VPP++L+RFLREHRSEWAD  +D  ++           
Sbjct: 476 DKLLYSLGGGILCAKASMLLQNVPPSLLIRFLREHRSEWADYDMDDMASFRSNGNGY--- 532

Query: 516 VPRAGNFGG-QVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENA 574
           VPR G     Q+ LPLA + E  E LEV+KLE  +  +  M++  DIFLLQLCSG+DE+A
Sbjct: 533 VPRGGGVSHVQLPLPLAQSGECGEILEVVKLEGHSSVQH-MVLSRDIFLLQLCSGIDESA 591

Query: 575 VGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSG-KDTPSPNRTLDLASALEVGPTGNK 633
           +G C++L+FAP+D + +D  P++PSGF + P+D+   D    +RTLDLAS LE G    +
Sbjct: 592 LGACSQLIFAPVDVALADGIPLLPSGFCVSPIDTNVVDGFGLDRTLDLASTLE-GGNDLR 650

Query: 634 ASGD--SSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSR 691
            +GD  S++  G  +SV+TIAFQFA+E+H +E VA+MARQYVR ++ASVQRVA+AL+PSR
Sbjct: 651 LNGDVKSNSSSGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRTVVASVQRVAMALAPSR 710

Query: 692 FGSNAGLRPP---PGSPEAHTLARWICQSYRCVFYFLFD 727
                G  PP   P +P+A +LA  +  SYR  F+   D
Sbjct: 711 -----GAAPPRQAPSNPDALSLACHVLSSYR--FHLGID 742


>gi|90110440|gb|ABD90522.1| class III homeodomain-leucine zipper [Physcomitrella patens]
          Length = 868

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/746 (56%), Positives = 532/746 (71%), Gaps = 60/746 (8%)

Query: 22  MDN-GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 80
           MD+ GKYVRYT EQVEALER+YHECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRC
Sbjct: 1   MDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRC 60

Query: 81  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ----------- 129
           REKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQQ           
Sbjct: 61  REKQRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLENHSLRQQLPSLPLTNGTH 120

Query: 130 ---TQN--------------------------AATLATTDTSCESVVTSGQ-HHLTPQQQ 159
              +QN                           A +A+TDTSC+S VT G  HHLTP+  
Sbjct: 121 RLSSQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSCDSAVTGGLPHHLTPR-- 178

Query: 160 HQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGV 219
             H PR  SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD+IGI+AISHGC G+
Sbjct: 179 --HSPRYTSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGI 236

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLA 279
           AARACGLV LD  +V E+LKDRP+W  DCR +EV+  LPTG+ GTIELLY Q+YA TTLA
Sbjct: 237 AARACGLVALDAGKVTEVLKDRPAWLEDCRRMEVLGALPTGNRGTIELLYTQMYASTTLA 296

Query: 280 PARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGG 339
           PARD+  LRYT++LEDG+LV+CERSL   QNGPSMP    FVR EM PSGYLIRPC+GGG
Sbjct: 297 PARDYCTLRYTTILEDGNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGG 356

Query: 340 SIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRR 399
            IIH+VDH D  PWSVPEVLRPLYES  ++AQ++T+AALRHLR+++ E S       G+ 
Sbjct: 357 CIIHVVDHYDNGPWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLAAEESGEGNPRNGQH 416

Query: 400 PAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGF 459
           PA LR L QRL++GF  A+NGF D+GW    SDG+DDV+V +N++   M G Q++     
Sbjct: 417 PAVLRTLGQRLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEG-QIASDKLL 475

Query: 460 PSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRA 519
            S+   +LCAKASMLLQ+VPP+IL++FLREHRSEWAD  +DA  A + ++          
Sbjct: 476 YSLGGGILCAKASMLLQNVPPSILIKFLREHRSEWADYDMDANLATSFRSNGNGYAPQGG 535

Query: 520 GNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCA 579
           G    Q+ LPL ++ EH E LEV+KLE+ +  +  M++  D FLLQLCSG+DENAVG  A
Sbjct: 536 GVSHVQLPLPLPNSGEHGEILEVVKLEDHSSVQH-MVISRDSFLLQLCSGIDENAVGASA 594

Query: 580 ELVFAPIDASFSDDAPIIPSGFRIIPLDSGK-DTPSPNRTLDLASALEVGPTGNKASGDS 638
           +L+FAP+D + ++D P++PSGF I P+D+   D    + TLDLAS LE G +  + +GDS
Sbjct: 595 QLIFAPVDVALTEDIPLLPSGFCISPVDANVLDEFDLDHTLDLASTLE-GGSDLRLNGDS 653

Query: 639 STQCGST--KSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNA 696
            +   S+  +SV+TIAFQFA+E+H  E  A MARQY+R +++SVQRVA+AL+PSR     
Sbjct: 654 KSNGTSSHMRSVLTIAFQFAYEVHSHEACAVMARQYLRTVVSSVQRVAMALAPSR----- 708

Query: 697 GLRPP---PGSPEAHTLARWICQSYR 719
           G  PP     +P+A +LAR + +SYR
Sbjct: 709 GSAPPRQMSANPDALSLARHVLRSYR 734


>gi|110349526|gb|ABG73238.1| class III HD-Zip protein HB13 [Physcomitrella patens]
          Length = 877

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/750 (56%), Positives = 534/750 (71%), Gaps = 60/750 (8%)

Query: 18  QKMIMDN-GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           ++  MD+ GKYVRYT EQVEALER+YHECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQ
Sbjct: 6   KEQTMDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQ 65

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ------- 129
           NRRCREKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQQ       
Sbjct: 66  NRRCREKQRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLENHSLRQQLPSLPLT 125

Query: 130 -------TQN--------------------------AATLATTDTSCESVVTSGQ-HHLT 155
                  +QN                           A +A+TDTSC+S VT G  HHLT
Sbjct: 126 NGTHRLSSQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSCDSAVTGGLPHHLT 185

Query: 156 PQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHG 215
           P+    H PR  SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD+IGI+AISHG
Sbjct: 186 PR----HSPRYTSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHG 241

Query: 216 CTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAP 275
           C G+AARACGLV LD  +V E+LKDRP+W  DCR +EV+  LPTG+ GTIELLY Q+YA 
Sbjct: 242 CVGIAARACGLVALDAGKVTEVLKDRPAWLEDCRRMEVLGALPTGNRGTIELLYTQMYAS 301

Query: 276 TTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPC 335
           TTLAPARD+  LRYT++LEDG+LV+CERSL   QNGPSMP    FVR EM PSGYLIRPC
Sbjct: 302 TTLAPARDYCTLRYTTILEDGNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPC 361

Query: 336 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTG 395
           +GGG IIH+VDH D  PWSVPEVLRPLYES  ++AQ++T+AALRHLR+++ E S      
Sbjct: 362 DGGGCIIHVVDHYDNGPWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLAAEESGEGNPR 421

Query: 396 WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSY 455
            G+ PA LR L QRL++GF  A+NGF D+GW    SDG+DDV+V +N++   M G Q++ 
Sbjct: 422 NGQHPAVLRTLGQRLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEG-QIAS 480

Query: 456 VNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLP 515
                S+   +LCAKASMLLQ+VPP+IL++FLREHRSEWAD  +DA  A + ++      
Sbjct: 481 DKLLYSLGGGILCAKASMLLQNVPPSILIKFLREHRSEWADYDMDANLATSFRSNGNGYA 540

Query: 516 VPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAV 575
               G    Q+ LPL ++ EH E LEV+KLE+ +  +  M++  D FLLQLCSG+DENAV
Sbjct: 541 PQGGGVSHVQLPLPLPNSGEHGEILEVVKLEDHSSVQH-MVISRDSFLLQLCSGIDENAV 599

Query: 576 GNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGK-DTPSPNRTLDLASALEVGPTGNKA 634
           G  A+L+FAP+D + ++D P++PSGF I P+D+   D    + TLDLAS LE G +  + 
Sbjct: 600 GASAQLIFAPVDVALTEDIPLLPSGFCISPVDANVLDEFDLDHTLDLASTLE-GGSDLRL 658

Query: 635 SGDSSTQCGST--KSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRF 692
           +GDS +   S+  +SV+TIAFQFA+E+H  E  A MARQY+R +++SVQRVA+AL+PSR 
Sbjct: 659 NGDSKSNGTSSHMRSVLTIAFQFAYEVHSHEACAVMARQYLRTVVSSVQRVAMALAPSR- 717

Query: 693 GSNAGLRPP---PGSPEAHTLARWICQSYR 719
               G  PP     +P+A +LAR + +SYR
Sbjct: 718 ----GSAPPRQMSANPDALSLARHVLRSYR 743


>gi|89514847|gb|ABD75298.1| class III homeodomain-leucine zipper protein C3HDZ2 [Physcomitrella
           patens]
          Length = 876

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/750 (56%), Positives = 534/750 (71%), Gaps = 60/750 (8%)

Query: 18  QKMIMDN-GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           ++  MD+ GKYVRYT EQVEALER+YHECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQ
Sbjct: 5   KEQTMDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQ 64

Query: 77  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ------- 129
           NRRCREKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQQ       
Sbjct: 65  NRRCREKQRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLENHSLRQQLPSLPLT 124

Query: 130 -------TQN--------------------------AATLATTDTSCESVVTSGQ-HHLT 155
                  +QN                           A +A+TDTSC+S VT G  HHLT
Sbjct: 125 NGTHRLSSQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSCDSAVTGGLPHHLT 184

Query: 156 PQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHG 215
           P+    H PR  SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD+IGI+AISHG
Sbjct: 185 PR----HSPRYTSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHG 240

Query: 216 CTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAP 275
           C G+AARACGLV LD  +V E+LKDRP+W  DCR +EV+  LPTG+ GTIELLY Q+YA 
Sbjct: 241 CVGIAARACGLVALDAGKVTEVLKDRPAWLEDCRRMEVLGALPTGNRGTIELLYTQMYAS 300

Query: 276 TTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPC 335
           TTLAPARD+  LRYT++LEDG+LV+CERSL   QNGPSMP    FVR EM PSGYLIRPC
Sbjct: 301 TTLAPARDYCTLRYTTILEDGNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPC 360

Query: 336 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTG 395
           +GGG IIH+VDH D  PWSVPEVLRPLYES  ++AQ++T+AALRHLR+++ E S      
Sbjct: 361 DGGGCIIHVVDHYDNGPWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLAAEESGEGNPR 420

Query: 396 WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSY 455
            G+ PA LR L QRL++GF  A+NGF D+GW    SDG+DDV+V +N++   M G Q++ 
Sbjct: 421 NGQHPAVLRTLGQRLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEG-QIAS 479

Query: 456 VNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLP 515
                S+   +LCAKASMLLQ+VPP+IL++FLREHRSEWAD  +DA  A + ++      
Sbjct: 480 DKLLYSLGGGILCAKASMLLQNVPPSILIKFLREHRSEWADYDMDANLATSFRSNGNGYA 539

Query: 516 VPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAV 575
               G    Q+ LPL ++ EH E LEV+KLE+ +  +  M++  D FLLQLCSG+DENAV
Sbjct: 540 PQGGGVSHVQLPLPLPNSGEHGEILEVVKLEDHSSVQH-MVISRDSFLLQLCSGIDENAV 598

Query: 576 GNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGK-DTPSPNRTLDLASALEVGPTGNKA 634
           G  A+L+FAP+D + ++D P++PSGF I P+D+   D    + TLDLAS LE G +  + 
Sbjct: 599 GASAQLIFAPVDVALTEDIPLLPSGFCISPVDANVLDEFDLDHTLDLASTLE-GGSDLRL 657

Query: 635 SGDSSTQCGST--KSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRF 692
           +GDS +   S+  +SV+TIAFQFA+E+H  E  A MARQY+R +++SVQRVA+AL+PSR 
Sbjct: 658 NGDSKSNGTSSHMRSVLTIAFQFAYEVHSHEACAVMARQYLRTVVSSVQRVAMALAPSR- 716

Query: 693 GSNAGLRPP---PGSPEAHTLARWICQSYR 719
               G  PP     +P+A +LAR + +SYR
Sbjct: 717 ----GSAPPRQMSANPDALSLARHVLRSYR 742


>gi|168023519|ref|XP_001764285.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684437|gb|EDQ70839.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  818 bits (2114), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/749 (56%), Positives = 531/749 (70%), Gaps = 63/749 (8%)

Query: 22  MDN-GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 80
           MD+ GKYVRYT EQVEALER+YHECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRC
Sbjct: 1   MDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRC 60

Query: 81  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ----------- 129
           REKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQQ           
Sbjct: 61  REKQRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLENHSLRQQLPSLPLTNGTH 120

Query: 130 ------------------------TQNA--------ATLATTDTSCESVVTSGQ-HHLTP 156
                                   TQ          A +A+TDTSC+S VT G  HHLTP
Sbjct: 121 RLSSQVLQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSCDSAVTGGLPHHLTP 180

Query: 157 QQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGC 216
           +    H PR  SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD+IGI+AISHGC
Sbjct: 181 R----HSPRYTSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGC 236

Query: 217 TGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPT 276
            G+AARACGLV LD  +V E+LKDRP+W  DCR +EV+  LPTG+ GTIELLY Q+YA T
Sbjct: 237 VGIAARACGLVALDAGKVTEVLKDRPAWLEDCRRMEVLGALPTGNRGTIELLYTQMYAST 296

Query: 277 TLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCE 336
           TLAPARD+  LRYT++LEDG+LV+CERSL   QNGPSMP    FVR EM PSGYLIRPC+
Sbjct: 297 TLAPARDYCTLRYTTILEDGNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCD 356

Query: 337 GGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGW 396
           GGG IIH+VDH D  PWSVPEVLRPLYES  ++AQ++T+AALRHLR+++ E S       
Sbjct: 357 GGGCIIHVVDHYDNGPWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLAAEESGEGNPRN 416

Query: 397 GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYV 456
           G+ PA LR L QRL++GF  A+NGF D+GW    SDG+DDV+V +N++   M G Q++  
Sbjct: 417 GQHPAVLRTLGQRLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEG-QIASD 475

Query: 457 NGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPV 516
               S+   +LCAKASMLLQ+VPP+IL++FLREHRSEWAD  +DA  A + ++       
Sbjct: 476 KLLYSLGGGILCAKASMLLQNVPPSILIKFLREHRSEWADYDMDANLATSFRSNGNGYAP 535

Query: 517 PRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVG 576
              G    Q+ LPL ++ EH E LEV+KLE+ +  +  M++  D FLLQLCSG+DENAVG
Sbjct: 536 QGGGVSHVQLPLPLPNSGEHGEILEVVKLEDHSSVQH-MVISRDSFLLQLCSGIDENAVG 594

Query: 577 NCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGK-DTPSPNRTLDLASALEVGPTGNKAS 635
             A+L+FAP+D + ++D P++PSGF I P+D+   D    + TLDLAS LE G +  + +
Sbjct: 595 ASAQLIFAPVDVALTEDIPLLPSGFCISPVDANVLDEFDLDHTLDLASTLE-GGSDLRLN 653

Query: 636 GDSSTQCGST--KSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFG 693
           GDS +   S+  +SV+TIAFQFA+E+H  E  A MARQY+R +++SVQRVA+AL+PSR  
Sbjct: 654 GDSKSNGTSSHMRSVLTIAFQFAYEVHSHEACAVMARQYLRTVVSSVQRVAMALAPSR-- 711

Query: 694 SNAGLRPP---PGSPEAHTLARWICQSYR 719
              G  PP     +P+A +LAR + +SYR
Sbjct: 712 ---GSAPPRQMSANPDALSLARHVLRSYR 737


>gi|108705780|gb|ABF93575.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
          Length = 626

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/634 (64%), Positives = 487/634 (76%), Gaps = 22/634 (3%)

Query: 2   MAVSSGGSRDSRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE 59
           MA +      S D GG   +  MD+GKYVRYTPEQVEALER+Y +CPKP+S RRQQL+RE
Sbjct: 1   MAAAVAMRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRE 60

Query: 60  CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           CPIL+NIEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQL
Sbjct: 61  CPILANIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQL 120

Query: 120 VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEE 178
           V+EN   RQQ QN  T    DTSCES VT      TPQ    +P RDAS P+GLLSIAEE
Sbjct: 121 VHENAHMRQQLQN--TPLANDTSCESNVT------TPQ----NPLRDASNPSGLLSIAEE 168

Query: 179 TLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEIL 238
           TLTEFLSKATGTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+V EIL
Sbjct: 169 TLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEIL 228

Query: 239 KDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL 298
           KDRPSW+RDCR++EV  ++P G+ GT+EL+Y QLYAPTTL PARDFW LRYT+ +EDGSL
Sbjct: 229 KDRPSWFRDCRNLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSL 288

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
           VVCERSL+ +  GPS   A  +VRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEV
Sbjct: 289 VVCERSLSGSGGGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEV 348

Query: 359 LRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEAL 418
           LRPLYESS ++AQK T AALRH+RQI+QE S   V   GR+PA LR  SQRLSRGFN+A+
Sbjct: 349 LRPLYESSRVVAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAI 408

Query: 419 NGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDV 478
           +GF D+GWS++  DG++DV +  NS+             G P     ++CAKASMLLQ V
Sbjct: 409 SGFNDDGWSIMGGDGVEDVVIACNSTKKIRSNSNAGIAFGAP---GGIICAKASMLLQSV 465

Query: 479 PPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHE 537
           PPA+L+RFLREHRSEWAD +IDAY A+ +K   CSL   R   F G Q+I+PLAHT+E+E
Sbjct: 466 PPAVLVRFLREHRSEWADYNIDAYLASTLKTSACSLTGLRPMRFSGSQIIIPLAHTVENE 525

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPII 597
           E LEV++LE      ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F D+ P+I
Sbjct: 526 EILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLI 584

Query: 598 PSGFRIIPLD--SGKDTPSPNRTLDLASALEVGP 629
            SGFR+IPLD  + K    PN  +       +GP
Sbjct: 585 SSGFRVIPLDMKTVKCCQIPNYIIHYPFDCSLGP 618


>gi|414871037|tpg|DAA49594.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 648

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/593 (66%), Positives = 469/593 (79%), Gaps = 19/593 (3%)

Query: 18  QKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQN 77
           +K  MD GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+RECPILSNIE KQIKVWFQN
Sbjct: 13  EKSGMDTGKYVRYTPEQVEALERVYAECPKPSSARRQQLLRECPILSNIEAKQIKVWFQN 72

Query: 78  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLA 137
           RRCR+KQR E+SRLQ+VNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + +QQ QN +   
Sbjct: 73  RRCRDKQRNESSRLQSVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSL-- 130

Query: 138 TTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQ 196
            TD SCES  T      TP        RDAS P+GLL+IAEETLTEFLSKATGTA++WVQ
Sbjct: 131 ATDASCESNAT------TPANL-----RDASNPSGLLAIAEETLTEFLSKATGTAIDWVQ 179

Query: 197 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           MPGMKPGPDS GIV ISHG  GVAARACGLV L+PT++ EILKDRPSW+RDCRS+EV  +
Sbjct: 180 MPGMKPGPDSFGIVTISHGGRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVYTM 239

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQ 316
           LP G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ + +G S   
Sbjct: 240 LPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAAT 299

Query: 317 APHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA 376
              FVRAEMLPSGYL+R CEGGGSI+ IVDH+DL+ WSVPEVLRPLYESS ++AQK T  
Sbjct: 300 TQQFVRAEMLPSGYLVRQCEGGGSIVRIVDHLDLDAWSVPEVLRPLYESSRVVAQKMTTT 359

Query: 377 ALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
           ALRHLRQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DG++D
Sbjct: 360 ALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMCGDGMED 419

Query: 437 VTVHVNSSPSKMMGVQLSYVNGFPSMS-NAVLCAKASMLLQDVPPAILLRFLREHRSEWA 495
           V +  N   SK +    +   GF +     ++CAKASMLLQ VPPA+L+RFLREHRSEWA
Sbjct: 420 VIIACN---SKKIRSSSNPATGFGAPGPGGIICAKASMLLQSVPPAVLVRFLREHRSEWA 476

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           D + DAYSA+A+K  PCSLP  R   F G Q+I+PLAHT+E+EE LEV++LE      ++
Sbjct: 477 DYNFDAYSASALKTSPCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQTLTHDE 536

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
            ++  DI LLQLC+G+DE ++G+C +LVFAPID  F DDAP++ SGFR+IPLD
Sbjct: 537 GLLSRDIHLLQLCTGMDEKSMGSCFQLVFAPIDELFPDDAPLVSSGFRVIPLD 589


>gi|89514853|gb|ABD75301.1| class III homeodomain-leucine zipper protein C3HDZ2 [Selaginella
           kraussiana]
          Length = 840

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/729 (57%), Positives = 526/729 (72%), Gaps = 50/729 (6%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K IMD+GKY+RYTPEQVEALER+Y+ECPKPSS+RRQQL+RE P+L+NIEP+QIKVWFQNR
Sbjct: 10  KGIMDSGKYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPLLANIEPRQIKVWFQNR 69

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN--------------- 123
           RCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  +QL  +N               
Sbjct: 70  RCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHNTQLALDNQYLRQQLQQQTGASD 129

Query: 124 -----TFFRQQTQNAATLATTDTSCESVVTSG--QHHLTPQQQHQHPPRDASPAGLLSIA 176
                T  R+   N    A  D S +S VT G  Q H+T         RD+S AGLL+IA
Sbjct: 130 REPKTTSSRRYNNNEVVAA--DRSPDSEVTGGMPQQHITATTAAPQIARDSSHAGLLAIA 187

Query: 177 EETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAE 236
           EETL EFL+KATGTAV+W+ MPGMKPGPDS+G  AISHG T VAARA GLVGL+P++VAE
Sbjct: 188 EETLAEFLAKATGTAVDWIHMPGMKPGPDSVGTAAISHGSTSVAARAWGLVGLEPSKVAE 247

Query: 237 ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDG 296
           ILKDRPSW+R+CR +EV+    T + GT+EL+Y Q+YAPTTLA  RDFW +RYTS LEDG
Sbjct: 248 ILKDRPSWHRECRRLEVLRAFSTPNGGTVELVYTQMYAPTTLAAGRDFWTIRYTSFLEDG 307

Query: 297 SLVVCERSLNNTQNGPSMPQA-PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 355
            LV+CERSLN    GPS  Q+   FVRAEMLPSGYLIRP EGG   IHIVDHM+LE W V
Sbjct: 308 -LVICERSLNGIHGGPSNKQSGSDFVRAEMLPSGYLIRPYEGGMCSIHIVDHMELESWKV 366

Query: 356 PEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFN 415
            EVLRPLYESS+++AQK T+AALR+LR++   V + SV    ++ AA R +S+R++RGFN
Sbjct: 367 LEVLRPLYESSSVLAQKMTLAALRYLRRL---VYESSVERGAQQIAAWRGVSRRIARGFN 423

Query: 416 EALNGFTDEGWSMLESDGIDDVTVHVNSSPS-KMMGVQLSYVNGFPSMSNAVLCAKASML 474
           EA+N FTD+GWS L +DG++DVTV +N++P+   +G QL+  +   ++   VLCAKASML
Sbjct: 424 EAVNCFTDDGWSTLVTDGVEDVTVAINTNPTASSIGGQLASADRLYAVGGGVLCAKASML 483

Query: 475 LQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGN-FGGQVILPLAHT 533
           LQ+VPPA L+RFLREHRSEWAD +I   + ++++ G     + R  N F GQ  +PL H+
Sbjct: 484 LQNVPPATLIRFLREHRSEWADCNI---TDSSLRHG-----MARGANAFIGQYPVPLIHS 535

Query: 534 IEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDD 593
            E EEFLEV+KLE     +  +I+P +  LLQLCSG D+NAVG CA+LVFAP+DA+ SDD
Sbjct: 536 SEEEEFLEVVKLEGHTTGQNGVILPRETVLLQLCSGNDDNAVGACAQLVFAPVDAAVSDD 595

Query: 594 APIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAF 653
            P++PSGFR+IPLDSG D     RTLDLAS+LE G  G + + + S      +SV+T+AF
Sbjct: 596 VPLLPSGFRVIPLDSGLD----GRTLDLASSLEGGAEGGRFAEEPSCHL---RSVLTMAF 648

Query: 654 QFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARW 713
           QF FE H +++VA+ ARQYVR ++ SVQ VALAL+  R G   G    P + EA  LA+ 
Sbjct: 649 QFLFEAHNRDDVAASARQYVRNVMVSVQSVALALASFRLGPRVG----PRNVEALLLAQQ 704

Query: 714 ICQSYRCVF 722
           I +SY+  F
Sbjct: 705 ILRSYKANF 713


>gi|110349512|gb|ABG73231.1| class III HD-Zip protein HDZ31 [Selaginella kraussiana]
          Length = 825

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/723 (57%), Positives = 520/723 (71%), Gaps = 50/723 (6%)

Query: 25  GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
           GKYVRYTPEQVEALER+Y+ECPKPSS+RRQQL+RE P+L+NIEP+QIKVWFQNRRCREKQ
Sbjct: 1   GKYVRYTPEQVEALERVYNECPKPSSIRRQQLLREYPLLANIEPRQIKVWFQNRRCREKQ 60

Query: 85  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN--------------------T 124
           RKE SRLQ+VN  LTAMNK++MEEN+RL K  +QL  +N                    T
Sbjct: 61  RKETSRLQSVNSSLTAMNKIIMEENERLTKHNTQLALDNQYLRQQLQQQTGASDREPKTT 120

Query: 125 FFRQQTQNAATLATTDTSCESVVTSG--QHHLTPQQQHQHPPRDASPAGLLSIAEETLTE 182
             R+   N    A  D S +S VT G  Q H+T         RD+S AGLL+IAEETL E
Sbjct: 121 SSRRYNNNEVVAA--DRSPDSEVTGGMPQQHITATTAAPQIARDSSHAGLLAIAEETLAE 178

Query: 183 FLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRP 242
           FL+KATGTAV+W+ MPGMKPGPDS+G  AISHG T VAARA GLVGL+P++VAEILKDRP
Sbjct: 179 FLAKATGTAVDWIHMPGMKPGPDSVGTAAISHGSTSVAARAWGLVGLEPSKVAEILKDRP 238

Query: 243 SWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCE 302
           SW+R+CR +EV+    T + GT+EL+Y Q+YAPTTLA  RDFW +RYTS LEDG LV+CE
Sbjct: 239 SWHRECRRLEVLRAFSTPNGGTVELVYTQMYAPTTLAAGRDFWTIRYTSFLEDG-LVICE 297

Query: 303 RSLNNTQNGPSMPQA-PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 361
           RSLN    GPS  Q+   FVRAEMLPSGYLIRP EGG   IHIVDHM+LE W V EVLRP
Sbjct: 298 RSLNGIHGGPSNKQSGSDFVRAEMLPSGYLIRPYEGGMCSIHIVDHMELESWKVLEVLRP 357

Query: 362 LYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
           LYESS+++AQK T+AALR+LR++   V + SV    ++ AA R +S+R++RGFNEA+N F
Sbjct: 358 LYESSSVLAQKMTLAALRYLRRL---VYESSVERGAQQIAAWRGVSRRIARGFNEAVNCF 414

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPS-KMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
           TD+GWS L +DG++DVTV +N++P+   +G QL+  +   ++   VLCAKASMLLQ+VPP
Sbjct: 415 TDDGWSTLVTDGVEDVTVAINTNPTASSIGGQLASADRLYAVGGGVLCAKASMLLQNVPP 474

Query: 481 AILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGN-FGGQVILPLAHTIEHEEF 539
           A L+RFLREHRSEWAD +I   + ++++ G     + R  N F GQ  +PL H+ E EEF
Sbjct: 475 ATLIRFLREHRSEWADCNI---TDSSLRHG-----MARGANAFIGQYPVPLIHSSEEEEF 526

Query: 540 LEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPS 599
           LEV+KLE     +  +I+P +  LLQLCSG D+NAVG CA+LVFAP+DA+ SDD P++PS
Sbjct: 527 LEVVKLEGHTTGQNGVILPRETVLLQLCSGNDDNAVGACAQLVFAPVDAAVSDDVPLLPS 586

Query: 600 GFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           GF +IPLDSG D     RTLDLAS+LE G  G + + + S      +SV+T+AFQF FE 
Sbjct: 587 GFHVIPLDSGLD----GRTLDLASSLEGGAEGGRFAEEPSCHL---RSVLTMAFQFLFEA 639

Query: 660 HLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           H +++VA+ ARQYVR ++ SVQ VALAL+  R G   G    P + EA  LA+ I +SY+
Sbjct: 640 HNRDDVAASARQYVRNVMVSVQSVALALASFRLGPRVG----PRNVEALLLAQQILRSYK 695

Query: 720 CVF 722
             F
Sbjct: 696 ANF 698


>gi|168828723|gb|ACA33848.1| class III HD-Zip transcription factor HDZ31 [Pinus taeda]
          Length = 590

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/520 (72%), Positives = 439/520 (84%), Gaps = 3/520 (0%)

Query: 202 PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS 261
           PGPDSIGIVAIS+ C GVAARACGLVGLDPT+VAEI KDRPSW RDCR ++V+   PTG+
Sbjct: 1   PGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEIFKDRPSWLRDCRCLDVLTAFPTGN 60

Query: 262 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 321
            GTIELLYMQ YA TTLA ARDFW LRYT+VLEDGSLVVCERSL+ TQ GPS+P   HFV
Sbjct: 61  GGTIELLYMQTYAATTLAFARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFV 120

Query: 322 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL 381
           RAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRPLYESST++AQK T+AALR L
Sbjct: 121 RAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRRL 180

Query: 382 RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV 441
           RQI+QE +   V GWGR+PA LR  SQRLSRGFNEA+NGFTD+GWS++ SDG++DVT+ +
Sbjct: 181 RQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGSDGVEDVTIAI 240

Query: 442 NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDA 501
           NSSP+K    Q++  NG  ++   +LCAKASMLLQ+VPPA+L+RFLREHRSEWADS+IDA
Sbjct: 241 NSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADSNIDA 300

Query: 502 YSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSD 560
           YSAAA+K+ P S+P  RAG F G QVILPLAHT+EHEEFLEVIKLE     +E+ ++  D
Sbjct: 301 YSAAALKSSPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSRD 360

Query: 561 IFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKD-TPSPNRTL 619
           +FLLQLCSG+DENA G CAELVFAPID SF+DDAP++PSGFR+IPL+S  D +  PNRTL
Sbjct: 361 MFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGGPNRTL 420

Query: 620 DLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIAS 679
           DLASALEVG TG + SGDS T   + +SV+TIAFQF +E HL+ENVA+MARQYVR ++AS
Sbjct: 421 DLASALEVGSTGTRTSGDSGTS-SNLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVAS 479

Query: 680 VQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           VQRVA+A++PSR  S+ G RPPPG+PEA TLARWICQSYR
Sbjct: 480 VQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYR 519


>gi|317160486|gb|ADV04325.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 851

 Score =  770 bits (1987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/728 (54%), Positives = 515/728 (70%), Gaps = 39/728 (5%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K   D+GKYVRYT EQV+ALE+ Y ECPKP++ RRQQLIRECP+LSNIEPKQIKVWFQNR
Sbjct: 10  KYGFDSGKYVRYTEEQVQALEKFYSECPKPNAFRRQQLIRECPLLSNIEPKQIKVWFQNR 69

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQ------- 131
           RCREKQRKEA+RL A+N KL AMNK+L+++ND L KQ  Q V +N F R+Q +       
Sbjct: 70  RCREKQRKEATRLLALNEKLKAMNKVLVKQNDNLSKQAFQFVSQNNFLRRQLKLLKEQST 129

Query: 132 ----NAATLATTDTSCESVVTSG-QHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSK 186
               +   L TT+TS  S + SG + H  PQ     PP D +PA LL+ AEE L+EFL+K
Sbjct: 130 NLDGSKDALVTTETSSISRLVSGLRKHRVPQP----PPWDVNPAWLLAFAEEALSEFLAK 185

Query: 187 ATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR 246
           ATGT ++W+Q+PGMKPGPDSIGIVA+ HGC G AARAC LVG++ +RVA++LKDRP W+ 
Sbjct: 186 ATGTGIDWIQIPGMKPGPDSIGIVAVGHGCDGAAARACSLVGMESSRVADVLKDRPGWFC 245

Query: 247 DCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN 306
           DCR +E++    T S  T+ELLY Q+Y+PTTL  ARDF  LRYTSVLED +LVVCERSLN
Sbjct: 246 DCRRMEILGAFTTSSGATVELLYSQMYSPTTLTQARDFCTLRYTSVLEDRNLVVCERSLN 305

Query: 307 NTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS 366
                  +P    FVRAEML SGYLIRPC G GSI++IVDHMDLE    PEVLRP+YESS
Sbjct: 306 LGM----VPPNEGFVRAEMLSSGYLIRPCGGVGSIVYIVDHMDLEAGRAPEVLRPMYESS 361

Query: 367 TLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW 426
            ++AQK T++ALRHLR ++QE +   VTG   +PAALRALS R++R FN+A+N F ++GW
Sbjct: 362 AILAQKMTISALRHLRSLAQEAAGEVVTGGTLQPAALRALSLRIARSFNDAINSFPEDGW 421

Query: 427 SMLESDGIDDVTVHVNSSPS-KMMGVQLSYVNGFPSMSN-AVLCAKASMLLQDVPPAILL 484
             + SDGIDD+++ +NSS S + +G++ S  N   S  +  VLCAKASMLLQ+VPPA+L+
Sbjct: 422 FSVASDGIDDISISLNSSWSPRTVGLKCSSSNNLWSDGDGGVLCAKASMLLQNVPPAVLI 481

Query: 485 RFLREHRSE---WADSSIDAYSAAAVKAGPCSLPVPRAGNFGG------QVILPLAHTIE 535
           RFLREHRSE   WAD   D   +A ++       V  A   GG      +V +PLAH+ E
Sbjct: 482 RFLREHRSEWADWADCEHDVSCSATLRT-----RVYGAAALGGAELGRREVPMPLAHS-E 535

Query: 536 HEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAP 595
           H+E +E++K E     R+  ++  +++LLQLC+G+DE A+G+CA+LVFAP+D + SDD P
Sbjct: 536 HQEIMELVKFEGYDSARDGALVSKEMYLLQLCNGIDETAIGDCAQLVFAPVDGALSDDIP 595

Query: 596 IIPSGFRIIPLDSG-KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQ 654
           ++PSGFR+IPLD+   D    + TLDLAS LE G   + A  ++     + +S++TIAFQ
Sbjct: 596 LLPSGFRVIPLDTDFMDGYGMSCTLDLASMLEGGSDMDAAKTETGISSNNLRSIVTIAFQ 655

Query: 655 FAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWI 714
           F +E H  ++V+  AR+Y+R ++ASVQRVA+A++P R GS  GLR   G+ E  TL + I
Sbjct: 656 FGYETHNCDSVSVAARKYMRTVVASVQRVAMAIAP-RVGSTLGLRNLSGTSEVLTLVKRI 714

Query: 715 CQSYRCVF 722
             SYR  F
Sbjct: 715 VGSYRINF 722


>gi|302755606|ref|XP_002961227.1| hypothetical protein SELMODRAFT_270225 [Selaginella moellendorffii]
 gi|300172166|gb|EFJ38766.1| hypothetical protein SELMODRAFT_270225 [Selaginella moellendorffii]
          Length = 855

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/735 (54%), Positives = 511/735 (69%), Gaps = 49/735 (6%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K IMD GKY+RYTPEQVEALER+Y+ECPKPSS+RRQQL+RE P+L+NIEP+QIKVWFQNR
Sbjct: 11  KHIMDAGKYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPVLANIEPRQIKVWFQNR 70

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT-------------- 124
           RCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  EN               
Sbjct: 71  RCREKQRKETSRLQSVNASLTAMNKIIMEENERLTKHSSQLALENQYLRQQLQQQGGSER 130

Query: 125 ---FFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQ----------QHQHPPRDASPAG 171
                R+   +A      D S +S VT G     PQQ                RD+SPAG
Sbjct: 131 DLKLSRRYANDAQAALAADRSPDSEVTGGM----PQQLVAASTTTTTTAPQIARDSSPAG 186

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
           LL+IAEETLTEFL+KA GTAV+W+Q+PGMKPGPDS G  AISHG TGVAARA GLVGL+P
Sbjct: 187 LLAIAEETLTEFLAKARGTAVDWIQLPGMKPGPDSAGTAAISHGSTGVAARAWGLVGLEP 246

Query: 232 TRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTS 291
            +VAEILKDR SW RDCR +EV+   PT + GT+EL+Y Q+YAPTTLA ARDFW LRYT+
Sbjct: 247 DKVAEILKDRSSWLRDCRRLEVLRAFPTPNGGTVELVYTQMYAPTTLAAARDFWTLRYTT 306

Query: 292 VLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLE 351
            L++G LVVCE+SL+     P+      FVRAEML SG+LIRP EG    I+IVDHMDLE
Sbjct: 307 FLDEGDLVVCEKSLSGVHGLPAAKAGNDFVRAEMLASGFLIRPFEGNVCSIYIVDHMDLE 366

Query: 352 PWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQE--VSQPSVTGWGRRPAALRALSQR 409
            W V EVLRPLYESS+++AQ+ T+ ALR LR++  E  +++ +  G  ++ AA R +S+R
Sbjct: 367 SWKVHEVLRPLYESSSVLAQRMTLGALRFLRRLIYESPLNENAPRG-AQQSAAWRGVSRR 425

Query: 410 LSRGFNEALNGFTDEGWSMLESDGID-DVTVHVNSSP-SKMMGVQLSYVNGFPSMSNAVL 467
           ++RGFNEA+N F D+GW +  +D ID DVTV +N +P +  +G Q+   +   ++   VL
Sbjct: 426 IARGFNEAVNSFADDGWMI--TDAIDGDVTVAINVAPNASSIGGQVMPPDRLYAVGGGVL 483

Query: 468 CAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVI 527
           CAKASMLLQ+VPPA L+RFLREHRSEWAD ++     A+++A  C       GN  GQ  
Sbjct: 484 CAKASMLLQNVPPATLIRFLREHRSEWADCNV-VLDTASMRASACGFS---RGNVIGQCP 539

Query: 528 LPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID 587
           +PL  + E EEFLEV+KLE  A  +  +++P +  LLQLCSG D+NA+G CA+LVFAP+D
Sbjct: 540 VPLVQSAEEEEFLEVVKLEGHASGQNGVVIPRETVLLQLCSGHDDNAMGVCAQLVFAPVD 599

Query: 588 ASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKS 647
           A+ S+D P++PSGFR+IPLDSG D+   +RTLDLAS+LE G    K   +S       +S
Sbjct: 600 AAVSEDVPLLPSGFRVIPLDSGVDSSGLSRTLDLASSLEGGADIGKFPDESGCHL---RS 656

Query: 648 VITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEA 707
           V+T+AFQF FE H ++ VA+ ARQYVR ++ASVQ +A+AL+  R G   G    P + EA
Sbjct: 657 VLTLAFQFLFEAHNRDEVATSARQYVRHVMASVQSIAMALASFRLGPRVG----PRNVEA 712

Query: 708 HTLARWICQSYRCVF 722
             LA  I +SYR  F
Sbjct: 713 LLLAHQILRSYRANF 727


>gi|302772080|ref|XP_002969458.1| hypothetical protein SELMODRAFT_146209 [Selaginella moellendorffii]
 gi|110349516|gb|ABG73233.1| class III HD-Zip protein HDZ31 [Selaginella moellendorffii]
 gi|300162934|gb|EFJ29546.1| hypothetical protein SELMODRAFT_146209 [Selaginella moellendorffii]
          Length = 855

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/736 (54%), Positives = 510/736 (69%), Gaps = 49/736 (6%)

Query: 18  QKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQN 77
            K IMD GKY+RYTPEQVEALER+Y+ECPKPSS+RRQQL+RE P+L+NIEP+QIKVWFQN
Sbjct: 10  NKHIMDAGKYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPVLANIEPRQIKVWFQN 69

Query: 78  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN-------------- 123
           RRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  EN              
Sbjct: 70  RRCREKQRKETSRLQSVNASLTAMNKIIMEENERLTKHSSQLALENQYLRQQLQQQGGSE 129

Query: 124 ---TFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQ----------QHQHPPRDASPA 170
                 R+   +A      D S +S VT G     PQQ                RD+SPA
Sbjct: 130 RDLKLSRRYANDAQAALAADRSPDSEVTGGM----PQQLVAASTTTTTTAPQIARDSSPA 185

Query: 171 GLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLD 230
           GLL+IAEETLTEFL+KA GTAV+W+Q+PGMKPGPDS G  AISHG TGVAARA GLVGL+
Sbjct: 186 GLLAIAEETLTEFLAKARGTAVDWIQLPGMKPGPDSAGTAAISHGSTGVAARAWGLVGLE 245

Query: 231 PTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYT 290
           P +VAEILKDR SW RDCR +EV+   PT + GT+EL+Y Q+YAPTTLA ARDFW LRYT
Sbjct: 246 PDKVAEILKDRSSWLRDCRRLEVLRAFPTPNGGTVELVYTQMYAPTTLAAARDFWTLRYT 305

Query: 291 SVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDL 350
           + L++G LVVCE+SL+     P+      FVRAEML SG+LIRP EG    I+IVDHMDL
Sbjct: 306 TFLDEGDLVVCEKSLSGVHGLPAAKAGNDFVRAEMLASGFLIRPFEGNVCSIYIVDHMDL 365

Query: 351 EPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQE--VSQPSVTGWGRRPAALRALSQ 408
           E W V EVLRPLYESS+++AQ+ T+ ALR LR++  E  +++ +  G  ++ AA R +S+
Sbjct: 366 ESWKVHEVLRPLYESSSVLAQRMTLGALRFLRRLIYESPLNENAPRG-AQQSAAWRGVSR 424

Query: 409 RLSRGFNEALNGFTDEGWSMLESDGID-DVTVHVNSSP-SKMMGVQLSYVNGFPSMSNAV 466
           R++RGFNEA+N F D+GW +  +D ID DVTV +N +P +  +G Q+   +   ++   V
Sbjct: 425 RIARGFNEAVNSFADDGWMI--TDAIDGDVTVAINVAPNASSIGGQVMPPDRLYAVGGGV 482

Query: 467 LCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQV 526
           LCAKASMLLQ+VPPA L+RFLREHRSEWAD ++     A+++A  C       GN  GQ 
Sbjct: 483 LCAKASMLLQNVPPATLIRFLREHRSEWADCNV-VLDTASMRASACGFS---RGNVIGQC 538

Query: 527 ILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPI 586
            +PL  + E EEFLEV+KLE  A  +  +++P +  LLQLCSG D+NA G CA+LVFAP+
Sbjct: 539 PVPLVQSAEEEEFLEVVKLEGHASGQNGVVIPRETVLLQLCSGHDDNATGVCAQLVFAPV 598

Query: 587 DASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTK 646
           DA+ S+D P++PSGFR+IPLDSG D+   +RTLDLAS+LE G    K   +S       +
Sbjct: 599 DAAVSEDVPLLPSGFRVIPLDSGVDSSGLSRTLDLASSLEGGADIGKFPDESGCHL---R 655

Query: 647 SVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPE 706
           SV+T+AFQF FE H ++ VA+ ARQYVR ++ASVQ +A+AL+  R G   G    P + E
Sbjct: 656 SVLTLAFQFLFEAHNRDEVATSARQYVRHVMASVQSIAMALASFRLGPRVG----PRNVE 711

Query: 707 AHTLARWICQSYRCVF 722
           A  LA  I +SYR  F
Sbjct: 712 ALLLAHQILRSYRANF 727


>gi|302781336|ref|XP_002972442.1| hypothetical protein SELMODRAFT_270954 [Selaginella moellendorffii]
 gi|110349518|gb|ABG73234.1| class III HD-Zip protein HDZ32 [Selaginella moellendorffii]
 gi|300159909|gb|EFJ26528.1| hypothetical protein SELMODRAFT_270954 [Selaginella moellendorffii]
          Length = 840

 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/729 (54%), Positives = 491/729 (67%), Gaps = 61/729 (8%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K   D GKY+RYTPEQVEALER+YHECPKPSS+RRQQ++R+ P+L NIEP+QIKVWFQNR
Sbjct: 6   KSDFDTGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLGNIEPRQIKVWFQNR 65

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQ------- 131
           RCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  EN   RQQ Q       
Sbjct: 66  RCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLALENQCLRQQLQQIRSGGG 125

Query: 132 ----------------NAATLATTDTSCESVVTSG--QH-HLTPQQQHQHPPRDASPAGL 172
                           + + LA  D S +S VT G  QH  +TPQ      PRD+SPAGL
Sbjct: 126 AADPDKKSAAAADRFNDQSALALADRSPDSEVTGGVPQHLAITPQS-----PRDSSPAGL 180

Query: 173 LSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPT 232
           LSIAEETL  FL+KATGTAV+W+Q+PGMKPGPDSIG  AISH   G+AARA GLV L+P 
Sbjct: 181 LSIAEETLNSFLAKATGTAVDWIQIPGMKPGPDSIGTAAISHAGAGIAARAWGLVELEPI 240

Query: 233 RVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSV 292
           RVAEILKDRPSW  DCR +EVV   PT + GT+EL+Y Q+YAPTTLAPARDFW LRYT  
Sbjct: 241 RVAEILKDRPSWLWDCRRLEVVGSFPTPNGGTLELVYTQMYAPTTLAPARDFWTLRYTIF 300

Query: 293 LEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEP 352
           LED SL VCERSL    N P++     F RAEMLPSG+LIRP EGG S IH+VDH DLE 
Sbjct: 301 LEDRSLAVCERSLTGIHNKPAIKNG-DFERAEMLPSGFLIRPYEGGVSSIHVVDHWDLES 359

Query: 353 WSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSR 412
           W V EVLRPLYESS ++AQ+ T+ AL HL++ISQE S   +   G++PAALRA S R++R
Sbjct: 360 WKVLEVLRPLYESSVILAQRVTLGALHHLKRISQESSGEVLMRGGQQPAALRAFSHRIAR 419

Query: 413 GFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKAS 472
           GFN+A+N F ++GW+   SDG DDVT+ +N++            + F +    +LCAK+S
Sbjct: 420 GFNDAVNAFAEDGWT---SDGGDDVTISINTALGAKA-AGAQGGDRFCAF-GGILCAKSS 474

Query: 473 MLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAH 532
           MLLQ+VP A L+RFLREHRSEWA  +I + S + +K G         GN   + + P   
Sbjct: 475 MLLQNVPAATLIRFLREHRSEWAGVNIASDSVSTLKIGGYGTS---KGNADEECLFP--- 528

Query: 533 TIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSD 592
                E LEVIK+E       + ++P D  LLQLC+G ++ A G CA+LVFAP+D + S+
Sbjct: 529 -----ELLEVIKMEGYG----NGMLPKDTVLLQLCTGYEDTASGTCAQLVFAPVDPAVSN 579

Query: 593 DAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIA 652
           D P++PSGFR+IPLD+G D  + +RTLDL S LE    G K   D S   G+ +SV+T+A
Sbjct: 580 DIPLLPSGFRVIPLDNGLDASALSRTLDLTSTLEGSADGGKFPDDFSGSGGNMRSVLTMA 639

Query: 653 FQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPP---PGSPEAHT 709
           FQF FE H +E + + ARQYVR ++ SVQ +A+AL+  R      L PP   P   EA  
Sbjct: 640 FQFVFEAHNREEIIASARQYVRNVMVSVQSIAMALASYR------LSPPQQGPKQQEAKI 693

Query: 710 LARWICQSY 718
            A  I +SY
Sbjct: 694 FALQIMRSY 702


>gi|302805045|ref|XP_002984274.1| hypothetical protein SELMODRAFT_180804 [Selaginella moellendorffii]
 gi|300148123|gb|EFJ14784.1| hypothetical protein SELMODRAFT_180804 [Selaginella moellendorffii]
          Length = 836

 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/743 (53%), Positives = 495/743 (66%), Gaps = 64/743 (8%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           K   D GKY+RYTPEQVEALER+YHECPKPSS+RRQQ++R+ P+L NIEP+QIKVWFQNR
Sbjct: 6   KSDFDTGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLGNIEPRQIKVWFQNR 65

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQ------- 131
           RCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  EN   RQQ Q       
Sbjct: 66  RCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLALENQCLRQQLQQIRSGGG 125

Query: 132 -----------------NAATLATTDTSCESVVTSG--QH-HLTPQQQHQHPPRDASPAG 171
                              + LA  D S +S VT G  QH  +TPQ      PRD+SPAG
Sbjct: 126 AADPDKKSAAAADRFNDQQSALALADRSPDSEVTGGVPQHLAITPQS-----PRDSSPAG 180

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMK--PGPDSIGIVAISHGCTGVAARACGLVGL 229
           LLSIAEETL  FL+KATGTAV+W+Q+PGMK  PGPDSIG  AISH   G+AARA GLV L
Sbjct: 181 LLSIAEETLNSFLAKATGTAVDWIQIPGMKACPGPDSIGTAAISHAGAGIAARAWGLVEL 240

Query: 230 DPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRY 289
           +P RVAEILKDRPSW  DCR +EVV   PT + GT+EL+Y Q+YAPTTLAPARDFW LRY
Sbjct: 241 EPIRVAEILKDRPSWLWDCRRLEVVGSFPTPNGGTLELVYTQMYAPTTLAPARDFWTLRY 300

Query: 290 TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMD 349
           T  LED SL VCERSL    N P++     F RAEMLPSG+LIRP EGG S IH+VDH D
Sbjct: 301 TIFLEDRSLAVCERSLTGIHNKPAIKNG-DFERAEMLPSGFLIRPYEGGVSSIHVVDHWD 359

Query: 350 LEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQR 409
           LE W V EVLRPLYESS ++AQ+ T+ AL HL++ISQE S   +   G++PAALRA S R
Sbjct: 360 LESWKVLEVLRPLYESSVILAQRVTLGALHHLKRISQESSGEVLMRGGQQPAALRAFSHR 419

Query: 410 LSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCA 469
           ++RGFN+A+N F ++GW+   SDG DDVT+ +N++            + F +    +LCA
Sbjct: 420 IARGFNDAVNAFAEDGWT---SDGGDDVTISINTALGAKA-AGAQGGDRFCAF-GGILCA 474

Query: 470 KASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILP 529
           K+SMLLQ+VP A L+RFLREHRSEWA  +I + S + +K G         GN   + + P
Sbjct: 475 KSSMLLQNVPAATLIRFLREHRSEWAGVNIASDSVSTLKIGGYGTS---KGNADEECLFP 531

Query: 530 LAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDAS 589
                   E LEVIK+E       + ++P D  LLQLC+G ++ A G CA+LVFAP+D +
Sbjct: 532 --------ELLEVIKMEGYG----NGMLPKDTVLLQLCTGYEDTASGTCAQLVFAPVDPA 579

Query: 590 FSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVI 649
            S+D P++PSGFR+IPLD+G D  + +RTLDL S LE    G K   D S   G+ +SV+
Sbjct: 580 VSNDIPLLPSGFRVIPLDNGLDASALSRTLDLTSTLEGSADGGKFPDDFSGSGGNMRSVL 639

Query: 650 TIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPP---PGSPE 706
           T+AFQF FE H +E + + ARQYVR ++ SVQ +A+AL+  R      L PP   P   E
Sbjct: 640 TMAFQFVFEAHNREEIIASARQYVRNVMVSVQSIAMALASYR------LSPPQQGPKQQE 693

Query: 707 AHTLARWICQSYRCVFYFLFDAS 729
           A   A  I +SYR  F   F+ S
Sbjct: 694 AKIFALQIMRSYRASFNVEFNES 716


>gi|110349514|gb|ABG73232.1| class III HD-Zip protein HDZ32 [Selaginella kraussiana]
          Length = 820

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/733 (54%), Positives = 491/733 (66%), Gaps = 57/733 (7%)

Query: 10  RDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           R ++D GG    +D+GKY+RYTPEQVEALER+YHECPKPSS+RRQQ++R+ P+L+NIEP+
Sbjct: 2   RMTKDKGGD---LDSGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEPR 58

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF--- 126
           QIKVWFQNRRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  +N      
Sbjct: 59  QIKVWFQNRRCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLSLDNQLLRQQ 118

Query: 127 -----------RQQTQ--NAATLATTDTSCESVVTSG--QHHLTPQQQHQHPPRDASPAG 171
                      R+ +   N   LA  D S +S VT G   HHLT   Q    PRD+SPAG
Sbjct: 119 LQQLRNNQDPDRKSSDRLNDQALALADRSPDSEVTGGVPHHHLTMAPQS---PRDSSPAG 175

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
           LLSIAEETL  FL+KATGT V+W+Q+PGMKPGPDSI   AISHG  GVAARA GLV L+P
Sbjct: 176 LLSIAEETLNSFLAKATGTLVDWIQIPGMKPGPDSISAAAISHGSAGVAARAVGLVDLEP 235

Query: 232 TRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTS 291
            RVAEILKDRPSW  DCR +EVV   PT + GT+EL+Y Q+YAPTTLAPARDFW LRYT 
Sbjct: 236 IRVAEILKDRPSWLWDCRRLEVVGTFPTPNGGTLELIYSQMYAPTTLAPARDFWTLRYTI 295

Query: 292 VLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLE 351
            LED SLVVCE+SL            P F RAEMLPSG+LIRP EGG S IHIVDH DLE
Sbjct: 296 FLEDRSLVVCEKSLTGAHG--KHKGGPDFERAEMLPSGFLIRPYEGGVSSIHIVDHYDLE 353

Query: 352 PWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLS 411
            W V EVLRPLYESS  +AQ+ T+AAL+HL++ISQE S   +   G++PAALRA S R++
Sbjct: 354 SWRVLEVLRPLYESSVFLAQRVTIAALQHLKRISQESSGEILLRGGQQPAALRAFSHRIA 413

Query: 412 RGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS-PSKMMGVQLSYVNGFPSMSNAVLCAK 470
           RGFN+A+NGF ++GW  L +DGID V++ +N+S  SK +     + + F +  + +LCAK
Sbjct: 414 RGFNDAVNGFAEDGWVSLVADGIDTVSITINTSVASKALPGNQVWPDRFSNNISGILCAK 473

Query: 471 ASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPL 530
           +SMLLQ+VPPA L+RFLREHRSEW   +      +A      +L +   G   G      
Sbjct: 474 SSMLLQNVPPATLIRFLREHRSEWVGCN------SATSDSVSALRISGYGTSKGD----- 522

Query: 531 AHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASF 590
               E  E LEVIK+E          +P D  LLQLC+G  +N  G CA+L+FAP+D + 
Sbjct: 523 ----EEPELLEVIKMEGYG----SQSVPKDTVLLQLCTGYTDNVSGTCAQLIFAPVDPAV 574

Query: 591 SDDAPIIPSGFRIIPLDSGKDTPSP-NRTLDLASALEVGPTGNKASGDSSTQCGSTKSVI 649
           ++D P++PSGFR+IPLDSG   P+    TLDLAS L+   T       SS  C   +SV+
Sbjct: 575 TNDMPLLPSGFRVIPLDSGSALPTKLAPTLDLASTLD---TAKFPDDSSSAHC---RSVL 628

Query: 650 TIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHT 709
           T+AFQF FE H +E + S ARQYVR ++ SVQ +A+AL+  R     G    P  PEA  
Sbjct: 629 TMAFQFVFEAHNREEIISSARQYVRNVMVSVQSIAMALASFRMSPQQG----PKQPEARI 684

Query: 710 LARWICQSYRCVF 722
           +A  I + +R  F
Sbjct: 685 IAEQIVRGFRSSF 697


>gi|90110444|gb|ABD90524.1| class III homeodomain-leucine zipper [Selaginella kraussiana]
          Length = 820

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/733 (53%), Positives = 491/733 (66%), Gaps = 57/733 (7%)

Query: 10  RDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           R ++D GG    +D+GKY+RYTPEQVEALER+YHECPKPSS+RRQQ++R+ P+L+NIEP+
Sbjct: 2   RMTKDKGGD---LDSGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEPR 58

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF--- 126
           QIKVWFQNRRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  +N      
Sbjct: 59  QIKVWFQNRRCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLSLDNQLLRQQ 118

Query: 127 -----------RQQTQ--NAATLATTDTSCESVVTSG--QHHLTPQQQHQHPPRDASPAG 171
                      R+ +   N   LA  D S +S VT G   HHLT   Q    PRD+SPAG
Sbjct: 119 LQQLRNNQDPDRKSSDRLNDQALALADRSPDSEVTGGVPHHHLTMAPQS---PRDSSPAG 175

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
           LLSIAEETL  FL+KATGT V+W+Q+PGMKPGPDSI   AISHG  GVAARA GLV L+P
Sbjct: 176 LLSIAEETLNSFLAKATGTLVDWIQIPGMKPGPDSISAAAISHGSAGVAARAVGLVDLEP 235

Query: 232 TRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTS 291
            RVAEILKDRPSW  DCR +EVV   PT + GT+EL+Y ++YAPTTLAPARDFW LRYT 
Sbjct: 236 IRVAEILKDRPSWLWDCRRLEVVGTFPTPNGGTLELIYSRMYAPTTLAPARDFWTLRYTI 295

Query: 292 VLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLE 351
            LED SLVVCE+SL            P F RAEMLPSG+LIRP EGG S IHIVDH DLE
Sbjct: 296 FLEDRSLVVCEKSLTGAHG--KHKGGPDFERAEMLPSGFLIRPYEGGVSSIHIVDHYDLE 353

Query: 352 PWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLS 411
            W V EVLRPLYESS  +AQ+ T+AAL+HL++ISQE S   +   G++PAALRA S R++
Sbjct: 354 SWRVLEVLRPLYESSVFLAQRVTIAALQHLKRISQESSGEILLRGGQQPAALRAFSHRIA 413

Query: 412 RGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS-PSKMMGVQLSYVNGFPSMSNAVLCAK 470
           RGFN+A+NGF ++GW  L +DGID V++ +N+S  SK +     + + F +  + +LCAK
Sbjct: 414 RGFNDAVNGFAEDGWVSLVADGIDTVSITINTSVASKALPGNQVWPDRFSNNISGILCAK 473

Query: 471 ASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPL 530
           +SMLLQ+VPPA L+RFLREHRSEW   +      +A      +L +   G   G      
Sbjct: 474 SSMLLQNVPPATLIRFLREHRSEWVGCN------SATSDSVSALRISGYGTSKGD----- 522

Query: 531 AHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASF 590
               E  E LEVIK+E          +P D  LLQLC+G  +N  G CA+L+FAP+D + 
Sbjct: 523 ----EEPELLEVIKMEGYG----SQSVPKDTVLLQLCTGYTDNVSGTCAQLIFAPVDPAV 574

Query: 591 SDDAPIIPSGFRIIPLDSGKDTPSP-NRTLDLASALEVGPTGNKASGDSSTQCGSTKSVI 649
           ++D P++PSGFR+IPLDSG   P+    TLDLAS L+   T       SS  C   +SV+
Sbjct: 575 TNDMPLLPSGFRVIPLDSGSALPTKLAPTLDLASTLD---TAKFPDDSSSAHC---RSVL 628

Query: 650 TIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHT 709
           T+AFQF FE H +E + S ARQYVR ++ SVQ +A+AL+  R     G    P  PEA  
Sbjct: 629 TMAFQFVFEAHNREEIISSARQYVRNVMVSVQSIAMALASFRMSPQQG----PKQPEARI 684

Query: 710 LARWICQSYRCVF 722
           +A  I + +R  F
Sbjct: 685 IAEQIVRGFRSSF 697


>gi|89514851|gb|ABD75300.1| class III homeodomain-leucine zipper protein C3HDZ1 [Selaginella
           kraussiana]
          Length = 820

 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/733 (54%), Positives = 490/733 (66%), Gaps = 57/733 (7%)

Query: 10  RDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           R ++D GG    +D+GKY+RYTPEQVEALER+YHECPKPSS+RRQQ++R+ P+L+NIEP+
Sbjct: 2   RMTKDKGGD---LDSGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEPR 58

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF--- 126
           QIKVWFQNRRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  +N      
Sbjct: 59  QIKVWFQNRRCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLSLDNQLLRQQ 118

Query: 127 -----------RQQTQ--NAATLATTDTSCESVVTSG--QHHLTPQQQHQHPPRDASPAG 171
                      R+ +   N   LA  D S +S VT G   HHLT   Q    PRD+SPAG
Sbjct: 119 LQQLRNNQDPDRKSSDRLNDQALALADRSPDSEVTGGVPHHHLTMAPQS---PRDSSPAG 175

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
           LLSIAEET   FL+KATGT V+W+Q+PGMKPGPDSI   AISHG  GVAARA GLV L+P
Sbjct: 176 LLSIAEETPNSFLAKATGTLVDWIQIPGMKPGPDSISAAAISHGSAGVAARAVGLVDLEP 235

Query: 232 TRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTS 291
            RVAEILKDRPSW  DCR +EVV   PT S GT+EL+Y Q+YAPTTLAPARDFW LRYT 
Sbjct: 236 IRVAEILKDRPSWLWDCRRLEVVGTFPTPSGGTLELIYSQMYAPTTLAPARDFWTLRYTI 295

Query: 292 VLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLE 351
            LED SLVVCE+SL            P F RAEMLPSG+LIRP EGG S IHIVDH DLE
Sbjct: 296 FLEDRSLVVCEKSLTGAHG--KHKGGPDFERAEMLPSGFLIRPYEGGVSSIHIVDHYDLE 353

Query: 352 PWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLS 411
            W V EVLRPLYESS  +AQ+ T+AAL+HL++ISQE S   +   G++PAALRA S R++
Sbjct: 354 SWRVLEVLRPLYESSVFLAQRVTIAALQHLKRISQESSGEILLRGGQQPAALRAFSHRIA 413

Query: 412 RGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS-PSKMMGVQLSYVNGFPSMSNAVLCAK 470
           RGFN+A+NGF ++GW  L +DGID V++ +N+S  SK +     + + F +  + +LCAK
Sbjct: 414 RGFNDAVNGFAEDGWVSLVADGIDTVSITINTSVASKALPGNQVWPDRFSNNISGILCAK 473

Query: 471 ASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPL 530
           +SMLLQ+VPPA L+RFLREHRSEW   +      +A      +L +   G   G      
Sbjct: 474 SSMLLQNVPPATLIRFLREHRSEWVGCN------SATSDSVSALRISGYGTSKGD----- 522

Query: 531 AHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASF 590
               E  E LEVIK+E          +P D  LLQLC+G  +N  G CA+L+FAP+D + 
Sbjct: 523 ----EEPELLEVIKMEGYG----SQSVPKDTVLLQLCTGYTDNVSGTCAQLIFAPVDPAV 574

Query: 591 SDDAPIIPSGFRIIPLDSGKDTPSP-NRTLDLASALEVGPTGNKASGDSSTQCGSTKSVI 649
           ++D P++PSGFR+IPLDSG   P+    TLDLAS L+      K   DSS      +SV+
Sbjct: 575 TNDMPLLPSGFRVIPLDSGSALPTKLAPTLDLASTLDTA----KFPDDSS--LAHCRSVL 628

Query: 650 TIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHT 709
           T+AFQF FE H +E + S ARQYVR ++ SVQ +A+AL+  R     G    P  PEA  
Sbjct: 629 TMAFQFVFEAHNREEIISSARQYVRNVMVSVQSIAMALASFRMSPQQG----PKQPEARI 684

Query: 710 LARWICQSYRCVF 722
           +A  I + +R  F
Sbjct: 685 IAEQIVRGFRSSF 697


>gi|89514861|gb|ABD75305.1| class III homeodomain-leucine zipper protein C3HDZ1 [Ceratopteris
           richardii]
          Length = 844

 Score =  734 bits (1894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/717 (53%), Positives = 499/717 (69%), Gaps = 22/717 (3%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           + + D+ KYVRYT EQV+ALERLY ECP PSS RR QL+RECPILS IEPKQIKVWFQN 
Sbjct: 10  RSLADSCKYVRYTQEQVQALERLYAECPNPSSFRRLQLLRECPILSKIEPKQIKVWFQNG 69

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQ------- 131
            CR+KQRKEASRL  +N KL+AMN++L+EEN+ L KQ  QLV +N   R+Q +       
Sbjct: 70  GCRDKQRKEASRLANLNEKLSAMNRVLVEENESLSKQAIQLVLQNQKIRKQLKQLHCHES 129

Query: 132 ----NAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKA 187
               +   L++T+ S +SVVT+  +H T Q      PRDA P  L +IAEETL EFL+KA
Sbjct: 130 SVKLDQNGLSSTENSSDSVVTNIMNHQTLQL-----PRDAGPLRLAAIAEETLAEFLAKA 184

Query: 188 TGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD 247
           TGTAVEW+QMPGMKPGPDSIGIVA+S G  G+AARACGLVGLDP ++ E+LK+RP W  D
Sbjct: 185 TGTAVEWIQMPGMKPGPDSIGIVAVSDGSNGIAARACGLVGLDPAKIVELLKNRPLWLSD 244

Query: 248 CRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN 307
           CR +EVV    + S G +ELLYMQ YAPTTLA  RDF+ LRYT+VL+D ++VVCERSL  
Sbjct: 245 CRRMEVVGTCTSTSGGMVELLYMQFYAPTTLAMPRDFYTLRYTTVLDDCNVVVCERSLPL 304

Query: 308 TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 367
           +   P +P    FVRA+M  SGYLIRP  G GSI+++VDHMDL+P +VPEVLRPLYESS 
Sbjct: 305 SHGDPVLPPPDQFVRAKMHSSGYLIRPYGGVGSIVYLVDHMDLQPETVPEVLRPLYESSP 364

Query: 368 LIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           ++AQ+ TM A+R+LR ++ +V   S    G +PA +R L+QR++RGFNEA+N  +D+GWS
Sbjct: 365 VLAQRVTMGAMRYLRTVAHDVDGDSSPVRGLQPAVIRTLTQRMARGFNEAINCLSDDGWS 424

Query: 428 MLESDGIDDVTVHVNSSP-SKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
            + SDG+DDVT+ VN+ P S++   Q  + +  P+ S+ VLCAK SMLLQ+VPPA+L+RF
Sbjct: 425 SMPSDGMDDVTIAVNTYPVSRISQGQFLFCDRLPAASDGVLCAKTSMLLQNVPPALLIRF 484

Query: 487 LREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLE 546
           LREHRSEWAD  +    AA++   P  L   R  +  G   L L+H+ E  E LE+++++
Sbjct: 485 LREHRSEWADLEVCTDIAASLGHAP--LASRRGVSCYGSAPLLLSHSPEQRELLELLQMD 542

Query: 547 NMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPL 606
           +   +++      D FLLQLC+G+DE +VG  A+LVFAP+  S S+D P++ SGFR++PL
Sbjct: 543 SPTVFQDGGFYAKDNFLLQLCTGLDEASVGASAQLVFAPVSVSVSEDMPLVSSGFRVVPL 602

Query: 607 DSG-KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENV 665
           DS   +     RTLDLAS LE G      S D    C   +S++TIAFQF  E+   E V
Sbjct: 603 DSSLANEHEMARTLDLASVLESGGRIISPSADKGPTC-PMRSILTIAFQFPCEIQTFECV 661

Query: 666 ASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
           A++AR+YVR ++AS+ RVA+AL+ S     A L+  PG+PE   L + + QSY   F
Sbjct: 662 ATLARKYVRTVVASILRVAMALA-SNLSPPADLKQTPGTPELLILVQRMLQSYESHF 717


>gi|414868943|tpg|DAA47500.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 673

 Score =  728 bits (1880), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/539 (65%), Positives = 438/539 (81%), Gaps = 3/539 (0%)

Query: 184 LSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPS 243
           +SKATGTAV WVQM GMKPGPDS+GI+A+SH C+GVAARACGLV L+PT+VAEILKDR S
Sbjct: 1   MSKATGTAVNWVQMVGMKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRAS 60

Query: 244 WYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCER 303
           WYRDCR V++++V+PTG+ GTIEL+YMQ YA TTLA  RDFW LRYTS L+DGSLV+CER
Sbjct: 61  WYRDCRRVDILHVIPTGNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICER 120

Query: 304 SLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 363
           SL ++  GPS P+ P F+RAE+LPSGYLIRPC+GGGS+I+IVDH+DL   SVPEVLRPLY
Sbjct: 121 SLTHSTGGPSGPKTPDFIRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNACSVPEVLRPLY 180

Query: 364 ESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTD 423
           ES  ++AQK T AALRH+RQI+ E S  +  G GR+PA LR  SQRLSRGFN+A++GF D
Sbjct: 181 ESPKILAQKMTAAALRHIRQIAHESSGETPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPD 240

Query: 424 EGW-SMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAI 482
           +GW S+L SDG +D+++ +NSSP+K++G  +S    F +M   ++CAKASMLLQ+VPPA+
Sbjct: 241 DGWSSLLSSDGAEDISITINSSPNKLIGSDVSPSPFFSAMGGGIMCAKASMLLQNVPPAL 300

Query: 483 LLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLE 541
           L+RFLREHRSEWAD  +DAYSAA+++A P ++P  RAG F G QVILPLA T+EHEE LE
Sbjct: 301 LVRFLREHRSEWADPGVDAYSAASLRANPYNVPGLRAGGFMGNQVILPLARTVEHEECLE 360

Query: 542 VIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGF 601
           VI+L+      ++++M  D+FLLQLCSG+DE+A G CA+LVFAPID SF+DDAP++PSGF
Sbjct: 361 VIRLQGHGFSHDEVLMSPDMFLLQLCSGIDEDAPGACAQLVFAPIDESFADDAPLLPSGF 420

Query: 602 RIIPLDSGKDTPSPNRTLDLASALEVGPTGNK-ASGDSSTQCGSTKSVITIAFQFAFEMH 660
           R+IPLD+  D PS  RTLDLASALEVG  G   A  DS +   ST+SV+TIAFQF+FE H
Sbjct: 421 RVIPLDAKTDVPSATRTLDLASALEVGSGGGLCALSDSGSGTRSTRSVLTIAFQFSFENH 480

Query: 661 LQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           L+E+VA+MARQYVR ++A VQRVA+A+SPSR G +  L+ PPGSPEA  LA WI +SYR
Sbjct: 481 LRESVAAMARQYVRAVMAIVQRVAMAISPSRLGPHVELKHPPGSPEALALASWIGRSYR 539


>gi|89514859|gb|ABD75304.1| class III homeodomain-leucine zipper protein C3HDZ3 [Psilotum
           nudum]
          Length = 856

 Score =  727 bits (1877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/725 (53%), Positives = 501/725 (69%), Gaps = 32/725 (4%)

Query: 23  DNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCRE 82
           D GKYVRYT EQV+ LERLY+ECP PSS RR QL+++CPILSNIEPKQIKVWFQNRRCR+
Sbjct: 13  DPGKYVRYTHEQVQLLERLYNECPNPSSFRRLQLLKDCPILSNIEPKQIKVWFQNRRCRD 72

Query: 83  KQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFR--------------- 127
           KQRKE+SRL ++N KL+AMN++L+EEN +L KQ  QLV +N   R               
Sbjct: 73  KQRKESSRLVSLNEKLSAMNQVLVEENGQLSKQAIQLVLQNKQLRQQLQQLKSCSAGSEC 132

Query: 128 -----QQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTE 182
                 + Q     A T+TS +SVVTSG  HL+P     HP  DA P  L++IAE+TLTE
Sbjct: 133 KRGSLDKLQEKLAAAATETSSDSVVTSGLRHLSPTF---HPAHDAGPTRLMAIAEDTLTE 189

Query: 183 FLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRP 242
           FL+KATGTAV+W+QMPGMKPGPDSIGIVAISHGC G+AARACGLVGL+P ++A++LKDR 
Sbjct: 190 FLAKATGTAVDWIQMPGMKPGPDSIGIVAISHGCDGIAARACGLVGLEPFKIAKLLKDRT 249

Query: 243 SWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCE 302
           SW RDCR ++V+    T + G +ELLY+Q+Y PTTLA  RDF  LRYTS LE  ++VVCE
Sbjct: 250 SWLRDCRRMDVLAEFNTDAGGLLELLYIQMYTPTTLALPRDFCTLRYTSFLEGRNVVVCE 309

Query: 303 RSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPL 362
           R+       P++    HFVRAEM  SG+LIR     GSI+HIVDH+DL+P SVPEVLRPL
Sbjct: 310 RTFPVVNGVPTVAPVEHFVRAEMKSSGFLIRSYGSVGSIVHIVDHLDLQPGSVPEVLRPL 369

Query: 363 YESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFT 422
           Y+S +++AQ  T+ ALR+L+ + QE       G G +   +R L QR++R FNEA+N   
Sbjct: 370 YDSPSVLAQNMTVGALRYLQSLGQEAEADLALGQGLQLPVIRTLCQRMARSFNEAVNSLP 429

Query: 423 DEGWSMLESDGIDDVTVHVNSS-PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
           D+GWS L SDG+DDV++ VN+S  S   G QLS  +   S++  VLCAK SMLLQ+VPPA
Sbjct: 430 DDGWSSLASDGMDDVSIVVNASVSSGFSGQQLSLSDKLLSINGGVLCAKTSMLLQNVPPA 489

Query: 482 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFG---GQVILPLAHTIEHEE 538
           +L+RFLREHRSEWADS +DA   A +  G     V   G  G     V L LAH++E E 
Sbjct: 490 LLIRFLREHRSEWADSEVDAEGTATI--GSTIYDVSGFGRLGVSYAPVPLLLAHSLEQEL 547

Query: 539 FLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIP 598
            LE++++E  A  ++  ++P D FL+QLC+G+DE+ VG  A+LVFAP++ S S+D P++P
Sbjct: 548 -LELLQMECSAFVQDGAVLPKDQFLMQLCTGLDESPVGASAQLVFAPVNVSISEDMPLLP 606

Query: 599 SGFRIIPLDSG-KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAF 657
           SGFR++PLD+   D    +RTLDLASALE G       GDS      ++S++TIAFQF  
Sbjct: 607 SGFRVVPLDNNLLDGYGASRTLDLASALEGGSGVVTPVGDSGISTFPSRSILTIAFQFPC 666

Query: 658 EMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQS 717
           E+H  E VAS AR+Y+R I+ASV RVA+AL P+   S  G R  PG+PE   L + I Q+
Sbjct: 667 EVHSYEIVASFARKYLRTIVASVLRVAMALVPN-LSSKFGQRQLPGTPELLMLVQRILQA 725

Query: 718 YRCVF 722
           YR  F
Sbjct: 726 YREWF 730


>gi|449502845|ref|XP_004161759.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like, partial
           [Cucumis sativus]
          Length = 544

 Score =  699 bits (1805), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/414 (80%), Positives = 369/414 (89%), Gaps = 1/414 (0%)

Query: 308 TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 367
           TQNGPSMP   +FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDL+PWSVPEVLRPLY+SST
Sbjct: 1   TQNGPSMPPVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLDPWSVPEVLRPLYKSST 60

Query: 368 LIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           L+AQK TMAALR LRQISQEVSQP+VTGWGRRPAALRALSQ+LSRGFNEA+NGFTDEGWS
Sbjct: 61  LLAQKNTMAALRLLRQISQEVSQPNVTGWGRRPAALRALSQKLSRGFNEAVNGFTDEGWS 120

Query: 428 MLESDGIDDVTVHVNSSPSK-MMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
           +LE+DG+DDVT+ VN S  K MMG  +SY NGFPSMSNAVLCAKASMLLQ+V PA+L+RF
Sbjct: 121 LLENDGVDDVTLLVNMSHGKTMMGANISYSNGFPSMSNAVLCAKASMLLQNVTPAMLIRF 180

Query: 487 LREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLE 546
           LREHRSEWADSSIDAYSAAA+K G C LP   AG FGGQVILPLA T+EHEEF+EV+K E
Sbjct: 181 LREHRSEWADSSIDAYSAAAIKTGQCGLPGSHAGTFGGQVILPLAQTVEHEEFMEVVKFE 240

Query: 547 NMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPL 606
           N+ HYR+DM+MP DIFLLQLC+GVDEN VG  AEL+FAPIDASFSDDAPI+PSGFRIIPL
Sbjct: 241 NVGHYRDDMLMPGDIFLLQLCNGVDENTVGTSAELIFAPIDASFSDDAPILPSGFRIIPL 300

Query: 607 DSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVA 666
           DSG D  SPNRTLDLASAL+VGP GN+ASGD + Q G +KSV+TIAFQF F++HLQ+NVA
Sbjct: 301 DSGMDASSPNRTLDLASALDVGPAGNRASGDCAGQSGKSKSVMTIAFQFVFDVHLQDNVA 360

Query: 667 SMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRC 720
           +MARQYVR IIASVQRVALALSPS FG +A L+ P G+PEA TLARWI QSYRC
Sbjct: 361 AMARQYVRSIIASVQRVALALSPSNFGPHANLQTPAGAPEAQTLARWITQSYRC 414


>gi|110349556|gb|ABG73253.1| class III HD-Zip protein HDZ32 [Cycas revoluta]
          Length = 392

 Score =  694 bits (1790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/397 (82%), Positives = 361/397 (90%), Gaps = 5/397 (1%)

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA 133
           WFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQQ QNA
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQLQNA 60

Query: 134 ATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 193
            ++ATTDTSCESVVTSGQHHLTPQ    HPPRDASPAGLLSIAEETLTEFLSKATGTAVE
Sbjct: 61  -SIATTDTSCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETLTEFLSKATGTAVE 115

Query: 194 WVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEV 253
           W+QMPGMKPGPDSIGIVAISHGCTGVAARACGLVGL+PT+VAEILKDRPSW+RDCR V++
Sbjct: 116 WIQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTKVAEILKDRPSWFRDCRCVDI 175

Query: 254 VNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPS 313
           +    TG+ GT+ELLYMQ+YAPTTLA ARDFW LRYTSVLEDGSLVVCERSL+ TQ GPS
Sbjct: 176 LTAFSTGNGGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQGGPS 235

Query: 314 MPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKT 373
           MP  PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQKT
Sbjct: 236 MPPVPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 295

Query: 374 TMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDG 433
           TMAALRHLRQI+QE+S   V GWGR+PAALR   QRLS+GFNEA+NGFTD+GWS++ SDG
Sbjct: 296 TMAALRHLRQIAQEISCDVVLGWGRQPAALRTFGQRLSKGFNEAVNGFTDDGWSLMGSDG 355

Query: 434 IDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAK 470
           +DDVTV ++SSPSK++G QL+  +G P++   +LCAK
Sbjct: 356 MDDVTVLISSSPSKLLGSQLASSDGLPALGGGILCAK 392


>gi|110349532|gb|ABG73241.1| class III HD-Zip protein HDZ32 [Ceratopteris richardii]
          Length = 803

 Score =  686 bits (1769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/672 (54%), Positives = 468/672 (69%), Gaps = 38/672 (5%)

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA 133
           WFQNRRCREKQRKE SRLQ VN KLTAMNKLLMEENDRLQKQV+QL+YEN +FRQQ Q+ 
Sbjct: 1   WFQNRRCREKQRKETSRLQTVNSKLTAMNKLLMEENDRLQKQVAQLMYENGYFRQQLQHG 60

Query: 134 ATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 193
               TTDTSC+SVVTSG  HL   QQ Q P +D S AG++S+AEE L++FLSKATGT+V 
Sbjct: 61  GV--TTDTSCDSVVTSGLQHLPAPQQQQSPLQDGSYAGVISLAEEALSDFLSKATGTSVN 118

Query: 194 WVQMPGMKPGPDSIGIVAIS-HGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVE 252
           W+QMPGMKPGPD + +V I  HG TG+ ARACGL+ L+P+++ E+ KD+P+W R+CR + 
Sbjct: 119 WIQMPGMKPGPDFMSMVNIMPHGATGIGARACGLINLEPSKIVEVFKDKPTWLRECRRMT 178

Query: 253 VVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGP 312
            +    T   GTIE+LY Q+YAPTTLAPA+DF  LRYT+V +DGS VVCERSLN  Q  P
Sbjct: 179 TMFSTSTTGGGTIEVLYSQMYAPTTLAPAKDFCTLRYTTVSDDGSYVVCERSLNGAQTVP 238

Query: 313 SMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQK 372
           + PQ   FVRA+M   G LIRPCE  GSI+ +VDHMDLE WS+PEVLRPLYESST++A K
Sbjct: 239 TAPQISAFVRADMFTGGCLIRPCETSGSIVVVVDHMDLESWSIPEVLRPLYESSTILAHK 298

Query: 373 TTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESD 432
            T+AAL+HLR I+QE +  S  G G++PAA+R+LS R+++ FN+A+NGF D+GW  L  D
Sbjct: 299 VTIAALKHLRHIAQENALDS-PGAGQQPAAVRSLSYRIAKAFNDAVNGFPDDGWVPLTGD 357

Query: 433 GIDDVTVH----VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           G+DDVTV     VN+ P   + +  S      S++++VLCAKASMLLQ VPPA+L++F+R
Sbjct: 358 GVDDVTVMMKGPVNAGPVDHLSLHQS-----SSINSSVLCAKASMLLQHVPPALLVQFMR 412

Query: 489 EHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLE-- 546
           EHRSEWAD   +     A++          A     Q++ P  H+IE +EFLE+IK+E  
Sbjct: 413 EHRSEWADPVCE----EAMRMSNPGFSGFHAATSNSQLLQPQVHSIEEDEFLELIKMEGQ 468

Query: 547 NMAHYREDMIMPS-DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
           N    ++  +M S D+FLLQLCSG+++ + G CA++VFAPIDAS SDD  +IPSGFR+IP
Sbjct: 469 NSVSIQDQSLMNSQDMFLLQLCSGLEDKSSGACAQMVFAPIDASVSDDIALIPSGFRVIP 528

Query: 606 LD----SGKDTPSPNRTLDLASALEVGPTGNKASGD-----SSTQCGSTKSVITIAFQFA 656
           LD       +  S  RTLDLAS LEV  T +    D          GS +SV+TIAFQF+
Sbjct: 529 LDIEPHDQVNAASSGRTLDLASFLEVSNTTSSGGQDELHSRGRGAGGSLRSVLTIAFQFS 588

Query: 657 -FEMHLQENVASMARQYVRGIIASVQRVALA-----LSPSRFGS---NAGLRPPPGSPEA 707
             E  + ++VA +ARQYVR +++++QRVA+A     LS  +F         + P      
Sbjct: 589 CIEARMHDSVACIARQYVRSVVSTIQRVAVAFISNPLSLLKFPQPLRAYDSKNPITIQVQ 648

Query: 708 HTLARWICQSYR 719
            +LAR ICQSY+
Sbjct: 649 SSLARCICQSYK 660


>gi|413957204|gb|AFW89853.1| rolled leaf1 [Zea mays]
          Length = 528

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/468 (70%), Positives = 372/468 (79%), Gaps = 18/468 (3%)

Query: 12  SRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           S DSGG   +  MD+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPK
Sbjct: 14  SSDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPK 73

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN   RQQ
Sbjct: 74  QIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQ 133

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKAT 188
            QN  T    DTSCES VT      TP     +P RDAS P+GLL+IAEET TEFLSKAT
Sbjct: 134 LQN--TSLANDTSCESNVT------TPP----NPIRDASNPSGLLAIAEETFTEFLSKAT 181

Query: 189 GTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDC 248
           GTA++WVQMPGMKPGPDS+GIVAISHGC GVAARACGLV L+PT+  EILKDRPSW+RDC
Sbjct: 182 GTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDC 241

Query: 249 RSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           RS+EV    P G+ GTIEL+YMQ+YAPTTL PARDFW LRYT+ +EDGSLVVCERSL+ +
Sbjct: 242 RSLEVFTRFPAGNGGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGS 301

Query: 309 QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL 368
             GP+      FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS +
Sbjct: 302 GGGPNAASTQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV 361

Query: 369 IAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
           +AQK T  ALRHLRQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS+
Sbjct: 362 VAQKMTTVALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSV 421

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQ 476
           +  DGI+DV +  NS+             G P     ++CAKASMLLQ
Sbjct: 422 MGGDGIEDVVIACNSTKKIRNTSNAGITFGAP---GGIICAKASMLLQ 466


>gi|110349550|gb|ABG73250.1| class III HD-Zip protein HDZ31 [Ginkgo biloba]
          Length = 394

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/397 (78%), Positives = 349/397 (87%), Gaps = 3/397 (0%)

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA 133
           WFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN + RQQ QNA
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNA 60

Query: 134 ATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 193
            ++ATTDTSCESVVTSGQH   P  QH  PPRDASPAGLLSIAEETL EFLSKATGTAV+
Sbjct: 61  -SVATTDTSCESVVTSGQHQHNPTPQH--PPRDASPAGLLSIAEETLAEFLSKATGTAVD 117

Query: 194 WVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEV 253
           WVQMPGMKPGPDSIGIVAISH C+GVAARACGLVGL+PT++AEILKDRPSW RDCR ++V
Sbjct: 118 WVQMPGMKPGPDSIGIVAISHSCSGVAARACGLVGLEPTKIAEILKDRPSWLRDCRCLDV 177

Query: 254 VNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPS 313
           +   PTG+ GTIELLYMQ YAPTTLA ARDFW LRYT+VLEDGSLVVCERSL+  Q GPS
Sbjct: 178 LTPFPTGNGGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQGGPS 237

Query: 314 MPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKT 373
           +  A HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQK 
Sbjct: 238 IAPAQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKM 297

Query: 374 TMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDG 433
           T+AALR +RQI+QEV+   V GWGR+PA LR  SQRLSRGFNEA+NGFTD+GWS++ +DG
Sbjct: 298 TIAALRRIRQIAQEVTGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGNDG 357

Query: 434 IDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAK 470
           ++DVT+ +NSSPSK++G Q++  NG  ++   +LCAK
Sbjct: 358 MEDVTIAINSSPSKLLGSQVNSSNGLTAVGGGILCAK 394


>gi|109729930|tpg|DAA05779.1| TPA_inf: class III HD-Zip protein HDZ33 [Selaginella
           moellendorffii]
          Length = 812

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 323/677 (47%), Positives = 446/677 (65%), Gaps = 51/677 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           KY RYT EQ+E LE +Y+ECPKPSS+RRQQL++E PIL+NI PKQ+KVWFQNRRCREKQR
Sbjct: 6   KYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQR 65

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL----ATTDT 141
           KE SRL  +N KLTA+NK+L+E ND L KQ +QL  +    R+      +          
Sbjct: 66  KETSRLHGLNSKLTALNKILVENNDHLAKQSTQLTLQKHTLRKHLYGDCSSQRPPMEASQ 125

Query: 142 SCESVVTSGQHHLTPQQQH---QHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
            C   + +G   +    +    QH   D  P GL ++AE++L +FL+KATGTAV+W+Q+ 
Sbjct: 126 VCRGALAAGSSEIAGTSELPNIQHLSLDHGPVGLSALAEQSLADFLAKATGTAVDWIQLL 185

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAE-----ILKDRPSWYRDCRSVEV 253
           GMKPGPDS GIVAISHGC G+AARA GLV L+ TRV+E     +LKD+ SW  DCR  +V
Sbjct: 186 GMKPGPDSFGIVAISHGCDGIAARALGLVALEATRVSEWRIVEVLKDKTSWLWDCRRSDV 245

Query: 254 VNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPS 313
           +++  + +  T+E+++ QLYAPTTLAP RDF  LR T+ LEDG+LVVCERS+++ +    
Sbjct: 246 IHICSSENGSTMEIMHTQLYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLSY 305

Query: 314 MPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTLIAQK 372
           +P   +FVRAEML SGYL+RPCEGG  I+HI+DH+DL+P SV EVL RPLY SS+L+AQ+
Sbjct: 306 VPSTQYFVRAEMLTSGYLVRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSSSLLAQR 365

Query: 373 TTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESD 432
            T+ ALR L+ ++QE     V G G++P+ LR+LS+R++RGFN+A+NGF D+GW  +  D
Sbjct: 366 MTVKALRFLKHLAQEEIGEIVVGGGQQPSVLRSLSRRMARGFNDAVNGFPDDGWCTMGGD 425

Query: 433 GIDDVTVH----VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           G+D+V V     +N S SK    +LS + G       VLCAKASMLLQ+V P+ L+RFLR
Sbjct: 426 GLDNVAVSCNATINFSLSKFQSDRLSSLAG-------VLCAKASMLLQNVHPSYLIRFLR 478

Query: 489 EHRSEWADSSIDAY--SAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLE 546
           +HRSEW   ++D +   AA+   G              Q  +PL HT + E+FLE + LE
Sbjct: 479 DHRSEWG-CNMDFFQQDAASRSHGK------------RQAHVPLFHTAK-EDFLEAVILE 524

Query: 547 NMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPL 606
                 +  I+  +I+LLQLCSG+++  +  C++L+FAP+DA+ SDD P++ SGFR++PL
Sbjct: 525 GHYSAEDGTILSREIYLLQLCSGIEDEDIDGCSQLIFAPVDANLSDDMPLLSSGFRVLPL 584

Query: 607 DSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVA 666
               D     ++   +  L  G   N             +S++TIAFQF +E+  ++ VA
Sbjct: 585 CDDMDDIVKRQS--DSEELRSGKRKNHKFA---------RSILTIAFQFMYEVGTRDTVA 633

Query: 667 SMARQYVRGIIASVQRV 683
            MAR Y+R ++  VQR+
Sbjct: 634 EMARNYIRNVMDFVQRI 650


>gi|302763605|ref|XP_002965224.1| hypothetical protein SELMODRAFT_167294 [Selaginella moellendorffii]
 gi|300167457|gb|EFJ34062.1| hypothetical protein SELMODRAFT_167294 [Selaginella moellendorffii]
          Length = 778

 Score =  623 bits (1607), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 322/668 (48%), Positives = 441/668 (66%), Gaps = 65/668 (9%)

Query: 25  GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
            KY RYT EQ+E LE +Y+ECPKPSS+RRQQL++E PIL+NI PKQ+KVWFQNRRCREKQ
Sbjct: 5   NKYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQ 64

Query: 85  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCE 144
           RKE SRL  +N KLTA+NK+L+E ND L KQ +QL  +    R+                
Sbjct: 65  RKETSRLHGLNSKLTALNKILVENNDHLAKQSTQLTLQKHTLRK---------------- 108

Query: 145 SVVTSGQHHLTPQQQHQHPPRDASPA--GLLSIAEETLTEFLSKATGTAVEWVQMPGMKP 202
                   HL      Q PP +AS     L ++AE++L +FL+KATGTAV+W+Q+ GMKP
Sbjct: 109 --------HLYGDCSSQRPPMEASQVCCKLSALAEQSLADFLAKATGTAVDWIQLLGMKP 160

Query: 203 GPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSS 262
           GPDS GIVAISHGC G+AARA GLV L+ TR+ E+LKD+ SW  DCR  +V+++  + + 
Sbjct: 161 GPDSFGIVAISHGCDGIAARALGLVALEATRIVEVLKDKTSWLWDCRRSDVIHICSSENG 220

Query: 263 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVR 322
            T+E+++ QLYAPTTLAP RDF  LR T+ LEDG+LVVCERS+++ +    +P   +FVR
Sbjct: 221 STMEIMHTQLYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLSYVPSTQYFVR 280

Query: 323 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTLIAQKTTMAALRHL 381
           AEML SGYL+RPCEGG  I+HI+DH+DL+P SV EVL RPLY SS+L+AQ+ T+ ALR L
Sbjct: 281 AEMLTSGYLVRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSSSLLAQRMTVKALRFL 340

Query: 382 RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH- 440
           + ++QE     V G G++P+ LR+LS+R++RGFN+A+NGF D+GW  +  DG+D+V V  
Sbjct: 341 KHLAQEEIGEIVVGGGQQPSVLRSLSRRMARGFNDAVNGFPDDGWCTMGGDGLDNVAVSC 400

Query: 441 ---VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADS 497
              +N S SK    +LS + G       VLCAKASMLLQ+V P+ L+RFLR+HRSEW   
Sbjct: 401 NATINFSLSKFQSDRLSSLAG-------VLCAKASMLLQNVHPSYLIRFLRDHRSEWG-C 452

Query: 498 SIDAY--SAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDM 555
           ++D +   AA+   G              Q  +PL HT + E+FLE + LE      +  
Sbjct: 453 NMDFFQQDAASRSHGK------------RQAHVPLFHTAK-EDFLEAVILEGHYSAEDGT 499

Query: 556 IMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSP 615
           I+  +I+LLQLCSG+++  +  C++L+FAP+DA+ SDD P++ SGFR++PL    D    
Sbjct: 500 ILSREIYLLQLCSGIEDEDIDGCSQLIFAPVDANLSDDMPLLSSGFRVLPLCDDMDDIVK 559

Query: 616 NRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRG 675
            ++   +  L  G   N             +S++TIAFQF +E+  ++ VA MAR Y+R 
Sbjct: 560 RQS--DSEELRSGKRKNHKFA---------RSILTIAFQFMYEVGTRDTVAEMARNYIRN 608

Query: 676 IIASVQRV 683
           ++  VQR+
Sbjct: 609 VMDFVQRI 616


>gi|302757763|ref|XP_002962305.1| hypothetical protein SELMODRAFT_77000 [Selaginella moellendorffii]
 gi|300170964|gb|EFJ37565.1| hypothetical protein SELMODRAFT_77000 [Selaginella moellendorffii]
          Length = 821

 Score =  623 bits (1606), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 323/677 (47%), Positives = 446/677 (65%), Gaps = 51/677 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           KY RYT EQ+E LE +Y+ECPKPSS+RRQQL++E PIL+NI PKQ+KVWFQNRRCREKQR
Sbjct: 6   KYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQR 65

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATL----ATTDT 141
           KE SRL  +N KLTA+NK+L+E ND L KQ +QL  +    R+      +          
Sbjct: 66  KETSRLHGLNSKLTALNKILVENNDHLAKQSTQLTLQKHTLRKHLYGDCSSQRPPMEASQ 125

Query: 142 SCESVVTSGQHHLTPQQQH---QHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
            C   + +G   +    +    QH   D  P GL ++AE++L +FL+KATGTAV+W+Q+ 
Sbjct: 126 VCRGALAAGSSEIAGTSELPNIQHLSLDHGPVGLSALAEQSLADFLAKATGTAVDWIQLL 185

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAE-----ILKDRPSWYRDCRSVEV 253
           GMKPGPDS GIVAISHGC G+AARA GLV L+ TRV+E     +LKD+ SW  DCR  +V
Sbjct: 186 GMKPGPDSFGIVAISHGCDGIAARALGLVALEATRVSEWRIVEVLKDKTSWLWDCRRSDV 245

Query: 254 VNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPS 313
           +++  + +  T+E+++ QLYAPTTLAP RDF  LR T+ LEDG+LVVCERS+++ +    
Sbjct: 246 IHICSSENGSTMEIMHTQLYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLSY 305

Query: 314 MPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTLIAQK 372
           +P   +FVRAEML SGYL+RPCEGG  I+HI+DH+DL+P SV EVL RPLY SS+L+AQ+
Sbjct: 306 VPSTQYFVRAEMLTSGYLVRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSSSLLAQR 365

Query: 373 TTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESD 432
            T+ ALR L+ ++QE     V G G++P+ LR+LS+R++RGFN+A+NGF D+GW  +  D
Sbjct: 366 MTVKALRFLKHLAQEEIGEIVVGGGQQPSVLRSLSRRMARGFNDAVNGFPDDGWCTMGGD 425

Query: 433 GIDDVTVH----VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           G+D+V V     +N S SK    +LS + G       VLCAKASMLLQ+V P+ L+RFLR
Sbjct: 426 GLDNVAVSCNATINFSLSKFQSDRLSSLAG-------VLCAKASMLLQNVHPSYLIRFLR 478

Query: 489 EHRSEWADSSIDAY--SAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLE 546
           +HRSEW   ++D +   AA+   G              Q  +PL HT + E+FLE + LE
Sbjct: 479 DHRSEWG-CNMDFFQQDAASRSHGK------------RQAHVPLFHTAK-EDFLEAVILE 524

Query: 547 NMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPL 606
                 +  I+  +I+LLQLCSG+++  +  C++L+FAP+DA+ SDD P++ SGFR++PL
Sbjct: 525 GHYSAEDGTILSREIYLLQLCSGIEDEDIDGCSQLIFAPVDANLSDDMPLLSSGFRVLPL 584

Query: 607 DSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVA 666
               D     ++   +  L  G   N             +S++TIAFQF +E+  ++ VA
Sbjct: 585 CDDMDDIVKRQS--DSEELRSGKRKNHKFA---------RSILTIAFQFMYEVGTRDTVA 633

Query: 667 SMARQYVRGIIASVQRV 683
            MAR Y+R ++  VQR+
Sbjct: 634 EMARNYIRNVMDFVQRI 650


>gi|224029377|gb|ACN33764.1| unknown [Zea mays]
          Length = 584

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 297/452 (65%), Positives = 369/452 (81%), Gaps = 3/452 (0%)

Query: 270 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSG 329
           MQ YAPTTLA  RDFW LRYTS LEDGSLV+CERSL  +  GPS P  P+FVRAE+LPSG
Sbjct: 1   MQTYAPTTLAAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFVRAEVLPSG 60

Query: 330 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVS 389
           YLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYES  ++AQKTT+AALRH+RQI+ E S
Sbjct: 61  YLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIAALRHIRQIAHESS 120

Query: 390 QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMM 449
                G GR+PA LR  SQRLSRGFN+A+NGF D+GWS++ SDG +DVT+ +NSSP+K++
Sbjct: 121 GEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAINSSPNKLI 180

Query: 450 GVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKA 509
           G  ++    F ++   +LCAKASMLLQ+VPPA+L+RFLREHRSEWAD  +DAYSAAA++A
Sbjct: 181 GPHVNSSQLFTAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAAALRA 240

Query: 510 GPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 568
            P ++P  RA  F G QVILPLAHT+EHEEFLEVI+LE  +   +++++  D++LLQLCS
Sbjct: 241 SPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCS 300

Query: 569 GVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVG 628
           GVDENA G CA+LVFAPID SF+DDAP++PSGFR+IPLD+  D PS  RTLDLAS LEVG
Sbjct: 301 GVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDPPSGTRTLDLASTLEVG 360

Query: 629 PTG-NKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALAL 687
             G  +AS D+S+ C +T+SV+TIAFQF++E HL+E+VA+MARQYVR ++ASVQRVA+A+
Sbjct: 361 SGGTTRASSDASSTC-NTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAI 419

Query: 688 SPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +PSR G    ++  PGSPEAHTLARWI +SYR
Sbjct: 420 APSRIGGQLEMKQTPGSPEAHTLARWIGRSYR 451


>gi|449533848|ref|XP_004173883.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like, partial
           [Cucumis sativus]
          Length = 293

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 270/298 (90%), Positives = 283/298 (94%), Gaps = 5/298 (1%)

Query: 39  ERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKL 98
           ERLY+ECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKL
Sbjct: 1   ERLYYECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKL 60

Query: 99  TAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQ 158
           TAMN+LLMEENDRLQKQVSQLVYEN++FRQQTQNA TLATTDTSCESVVTSGQ +LTP  
Sbjct: 61  TAMNRLLMEENDRLQKQVSQLVYENSYFRQQTQNA-TLATTDTSCESVVTSGQQNLTPP- 118

Query: 159 QHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTG 218
              HPP+DASPAGLLSIAEETL EFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTG
Sbjct: 119 ---HPPKDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTG 175

Query: 219 VAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTL 278
           VAARACGLVGL+PTRVAEILKD PSW+RDCR+V+V+NVL TG+ GTIELLYMQLYAPTTL
Sbjct: 176 VAARACGLVGLEPTRVAEILKDWPSWFRDCRAVDVLNVLSTGNGGTIELLYMQLYAPTTL 235

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCE 336
           APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP   +FVRAEMLPSGYLIRPCE
Sbjct: 236 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVRAEMLPSGYLIRPCE 293


>gi|449506784|ref|XP_004162848.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ATHB-14-like [Cucumis sativus]
          Length = 566

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 270/424 (63%), Positives = 335/424 (79%), Gaps = 3/424 (0%)

Query: 298 LVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPE 357
           L VCERSL+++  GP+ P    FVRAEMLPSGYLIR CEG GSIIHIVDH+DL+ WSVPE
Sbjct: 9   LQVCERSLSSSSGGPAGPPPSTFVRAEMLPSGYLIRACEGXGSIIHIVDHIDLDVWSVPE 68

Query: 358 VLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEA 417
           VLRPLYESS ++AQK T+AALRH+RQI+QE +       GR+PA LR  SQ+L RGFN+A
Sbjct: 69  VLRPLYESSKILAQKITIAALRHIRQIAQETNGEIQCTGGRQPAVLRTFSQKLCRGFNDA 128

Query: 418 LNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQD 477
           +NGF D+GWS + SDG++DVT+ +N+S +K  G Q +  + +PS    V+CAKASMLLQ+
Sbjct: 129 VNGFADDGWSPMGSDGVEDVTILINTSANKFSGSQYN-TSLYPSFGGGVMCAKASMLLQN 187

Query: 478 VPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEH 536
           VPPA+L+RFLREHRSEWAD  +DAYSAA++KA P ++P  R G F   QVILPLA T+EH
Sbjct: 188 VPPALLVRFLREHRSEWADYGVDAYSAASLKASPYAVPCARPGGFPSSQVILPLATTVEH 247

Query: 537 EEFLEVIKLENMAHYREDMIMPS-DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAP 595
           EEFLEV++LE +A   ED+ +   D++LLQLCSGVDENAVG CA+LVFAPID SF+DDAP
Sbjct: 248 EEFLEVVRLEGLAFSPEDVALAGRDMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAP 307

Query: 596 IIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
           ++PSGFR+IPLD   D P+  RTLDLAS LEVG    +++G++     + +SV+TIAFQF
Sbjct: 308 LLPSGFRVIPLDPKTDEPTAARTLDLASTLEVGANAARSAGETDLSNYNLRSVLTIAFQF 367

Query: 656 AFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWIC 715
            FE HLQENVA+MARQYVR ++ SVQRVA+A+SPSR  SN GL+P PGSPEA TLARWIC
Sbjct: 368 TFENHLQENVAAMARQYVRSVVGSVQRVAMAISPSRLSSNMGLKPLPGSPEALTLARWIC 427

Query: 716 QSYR 719
           +SYR
Sbjct: 428 RSYR 431


>gi|312282779|dbj|BAJ34255.1| unnamed protein product [Thellungiella halophila]
          Length = 592

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/458 (58%), Positives = 347/458 (75%), Gaps = 13/458 (2%)

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEML 326
           + + Q YAPTTLAPARDFW LRYT+ L++GS VVCERSL+ +  GP+   A  FVRAEML
Sbjct: 1   MTFRQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEML 60

Query: 327 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQ 386
            SGYLIRPC+GGGSIIHIVDH++LE WSVP+VLRPLYESS ++AQK T++ALR++RQ++Q
Sbjct: 61  SSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALRYIRQLAQ 120

Query: 387 EVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPS 446
           E +   V G GR+PA LR  SQRLSRGFN+A+NGF D+GWS +  DG +D+ V +NS+  
Sbjct: 121 ESNGELVYGIGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVAINSTK- 179

Query: 447 KMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAA 506
                 L+ ++   S    VLCAKASMLLQ+VPPA+L+RFLREHRSEWAD ++DAYSAA 
Sbjct: 180 -----HLNNISNSLSFLGGVLCAKASMLLQNVPPAVLIRFLREHRSEWADFNVDAYSAAT 234

Query: 507 VKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQ 565
           +KAG  + P  R   F G Q+I+PL HTIEHEE LEV++LE  +  +ED  M  D+ LLQ
Sbjct: 235 LKAGTFAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQ 294

Query: 566 LCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDS----GKDTPSPN-RTLD 620
           +C+G+DENAVG C+EL+FAPI+  F DDAP++PSGFR+IP+D+     +D  + N RTLD
Sbjct: 295 ICTGIDENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDSQDLLTANHRTLD 354

Query: 621 LASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASV 680
           L S+LEVGP+  + +  +S+   S++ ++TIAFQF FE +LQENVA MA QYVR +I+SV
Sbjct: 355 LTSSLEVGPS-PENASGNSSANSSSRCILTIAFQFPFENNLQENVAGMACQYVRSVISSV 413

Query: 681 QRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           QRVA+A+SPS    + G +  PGSPEA TLA+WI QSY
Sbjct: 414 QRVAMAISPSGISPSLGSKLSPGSPEAVTLAQWISQSY 451


>gi|238908808|gb|ACF86690.2| unknown [Zea mays]
          Length = 558

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 258/428 (60%), Positives = 321/428 (75%), Gaps = 4/428 (0%)

Query: 293 LEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEP 352
           +EDGSLVVCERSL  +  GP+   A  FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE 
Sbjct: 1   MEDGSLVVCERSLTGSGGGPNAASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEA 60

Query: 353 WSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSR 412
           WSVPEVLRPLYESS ++AQK T  ALRHLRQI+QE S   V   GR+PA LR  SQRLSR
Sbjct: 61  WSVPEVLRPLYESSRVVAQKMTTVALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSR 120

Query: 413 GFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKAS 472
           GFN+A++GF D+GWS++  DGI+DV V  NS+             G P     ++CAKAS
Sbjct: 121 GFNDAISGFNDDGWSVMGGDGIEDVVVACNSTKKIRNNSNAGITFGAP---GGIICAKAS 177

Query: 473 MLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLA 531
           MLLQ VPPA+L+RFLREHRSEWAD +IDAY A+++K   CSLP  R   F GGQ+I+PLA
Sbjct: 178 MLLQSVPPAVLVRFLREHRSEWADYNIDAYLASSLKTSACSLPGLRPMRFSGGQMIMPLA 237

Query: 532 HTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFS 591
           HT+E+EE LEV++LE      ++ ++  DI LLQLC+G+DE +VG+  +LVFAPID  F 
Sbjct: 238 HTVENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDEHFP 297

Query: 592 DDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITI 651
           DDAP+I SGFR+IPLD   D  S  RTLDLAS+L+VG    +ASGD+     + +SV+TI
Sbjct: 298 DDAPLISSGFRVIPLDMKTDGVSSGRTLDLASSLDVGSAAPQASGDAPPDDCNLRSVLTI 357

Query: 652 AFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLA 711
           AFQF +EMHLQ++VA+MARQYVR ++++VQRV++A+SPS+ G NAG R   G PEA TLA
Sbjct: 358 AFQFPYEMHLQDSVATMARQYVRSVVSAVQRVSMAISPSQSGLNAGQRMLSGFPEAATLA 417

Query: 712 RWICQSYR 719
           RW+CQSY 
Sbjct: 418 RWVCQSYH 425


>gi|414871783|tpg|DAA50340.1| TPA: hypothetical protein ZEAMMB73_581465 [Zea mays]
          Length = 513

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/381 (63%), Positives = 310/381 (81%), Gaps = 3/381 (0%)

Query: 341 IIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRP 400
           +IHIVDH+DL+ WSVPEVLRPLYES  ++AQKTT+AALRH+RQI+ E S     G GR+P
Sbjct: 1   MIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIAALRHIRQIAHESSGEMPYGGGRQP 60

Query: 401 AALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFP 460
           A LR  SQRLSRGFN+A+NGF D+GWS++ SDG +DVT+ +NSSP+K++G  ++    F 
Sbjct: 61  AVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAINSSPNKLIGPHVNSSQLFT 120

Query: 461 SMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAG 520
           ++   +LCAKASMLLQ+VPPA+L+RFLREHRSEWAD  +DAYSAAA++A P ++P  RA 
Sbjct: 121 AIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAAALRASPYAVPGLRAS 180

Query: 521 NF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCA 579
            F G QVILPLAHT+EHEEFLEVI+LE  +   +++++  D++LLQLCSGVDENA G CA
Sbjct: 181 GFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACA 240

Query: 580 ELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGN-KASGDS 638
           +LVFAPID SF+DDAP++PSGFR+IPLD+  D PS  RTLDLAS LEVG  G  +AS D+
Sbjct: 241 QLVFAPIDESFADDAPLLPSGFRVIPLDAKTDPPSGTRTLDLASTLEVGSGGTTRASSDA 300

Query: 639 STQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGL 698
           S+ C +T+SV+TIAFQF++E HL+E+VA+MARQYVR ++ASVQRVA+A++PSR G    +
Sbjct: 301 SSTC-NTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEM 359

Query: 699 RPPPGSPEAHTLARWICQSYR 719
           +  PGSPEAHTLARWI +SYR
Sbjct: 360 KQTPGSPEAHTLARWIGRSYR 380


>gi|89514839|gb|ABD75294.1| class III homeodomain-leucine zipper protein C3HDZ1 [Chara
           corallina]
          Length = 910

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 271/616 (43%), Positives = 378/616 (61%), Gaps = 61/616 (9%)

Query: 134 ATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 193
           A+   TD S E VV   Q  ++         R  S + L+ +A + + EFL KATGTAV+
Sbjct: 188 ASTTVTDASSEVVVNGVQPSVSVSS------RADSQSALMQMASDMVGEFLGKATGTAVD 241

Query: 194 WVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEV 253
           W  MPG K GPD+  +V I  G  G+A+R  GLV ++P +VA  LKDR  W R+CR  EV
Sbjct: 242 WANMPGTKNGPDTFEMVFILRGGPGIASRVYGLVLMEPAKVASALKDRSQWLRECRKSEV 301

Query: 254 VNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPS 313
           +    T   GT+E++Y Q++APTTLAP RDF   RYT+ ++DGS+V+CERS++    G +
Sbjct: 302 LGEFRT-DQGTVEIVYTQMFAPTTLAPPRDFCTFRYTTFMQDGSIVICERSMSG---GTN 357

Query: 314 MPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKT 373
           +   P FVRAEM PSGY I+PC  G SII+IVDH+DL+P SVPEVLRPLYESS  +AQ+ 
Sbjct: 358 LEPVPAFVRAEMHPSGYYIKPC-NGNSIIYIVDHVDLKPLSVPEVLRPLYESSAALAQRQ 416

Query: 374 TMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDG 433
           TM ALR+LR+++ + +  S    G +  A R +++R++RGFNEA+NGF D+GW  L  DG
Sbjct: 417 TMEALRYLRRLASDSNLDSPRANGHQALAWRGIAERIARGFNEAVNGFPDDGWVPLMGDG 476

Query: 434 IDDVTV---------HVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILL 484
           +DDV+V         H  S+P+ M G          +    VLCAKASMLLQ+VPPA+L+
Sbjct: 477 MDDVSVAARPLNGQRHSGSNPA-MSGNS----EALRASEGGVLCAKASMLLQNVPPALLI 531

Query: 485 RFLREHRSEWADSSIDAYSAAAVKAGPCSL---------------PVPRAGNFGGQVILP 529
           +FLREHR+EW  + ++  SAA ++    S                PVP +G +G  +  P
Sbjct: 532 KFLREHRAEWVPADLELSSAAMMRGANGSFMAPGRNGEEIITPMPPVPLSGCYGTYLSDP 591

Query: 530 LAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-A 588
                  EEFLEV+K  + A  +E  IM      LQLCSG D NAV   A+LVFAP+D A
Sbjct: 592 ------SEEFLEVVKGGSQACGQESGIMSRQTLNLQLCSGTDTNAVAAVAQLVFAPVDAA 645

Query: 589 SFSDDAPIIPSGFRIIPLDSGKDTPS--PNRTLDLASALEVGPTGNKASGDSSTQCGSTK 646
           S +DD  I+PSGFR+IP+D+G        +RTLDLA++L+     N+ + D  +     +
Sbjct: 646 SSADDFSILPSGFRVIPIDAGLGVEGRPQSRTLDLAASLDTRDHSNREAVDGMSPGVCWR 705

Query: 647 SVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGS-- 704
           SV+T+ FQF+++ H + ++A++AR YVR ++  VQRVA+AL+P+         PP  S  
Sbjct: 706 SVLTMTFQFSYKPHSENDMATVARVYVRSVVNYVQRVAMALAPA---------PPSRSQS 756

Query: 705 -PEAHTLARWICQSYR 719
            P   +LA+ + +SYR
Sbjct: 757 QPFMVSLAQNLVRSYR 772



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 77/108 (71%), Positives = 92/108 (85%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD+ KYVRYT EQVEALER+Y+ECPKPSS RR QL++E PIL+NIEPKQIKVWFQNRRCR
Sbjct: 1   MDSSKYVRYTNEQVEALERVYNECPKPSSARRSQLLQEYPILANIEPKQIKVWFQNRRCR 60

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           EKQRKEA+RL  +N KL+A+NK+LMEEN+RL KQ ++L  E    RQ+
Sbjct: 61  EKQRKEATRLINMNAKLSALNKMLMEENERLMKQTTELSMEVQVLRQE 108


>gi|224150191|ref|XP_002336921.1| hypothetical protein POPTRDRAFT_292259 [Populus trichocarpa]
 gi|222837134|gb|EEE75513.1| hypothetical protein POPTRDRAFT_292259 [Populus trichocarpa]
          Length = 231

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/231 (91%), Positives = 223/231 (96%)

Query: 190 TAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCR 249
           TAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGL+PTRVAEILKDRPSW+RDCR
Sbjct: 1   TAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCR 60

Query: 250 SVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQ 309
           +V+V+N + T + GTIELLYMQLYAPTTLAPARDF LLRYTSVLEDGSLVVCERSLNNTQ
Sbjct: 61  AVDVINAMSTANGGTIELLYMQLYAPTTLAPARDFLLLRYTSVLEDGSLVVCERSLNNTQ 120

Query: 310 NGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLI 369
           NGPSMP   HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTL+
Sbjct: 121 NGPSMPPTQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLL 180

Query: 370 AQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           AQKTTMAALRHLRQISQE+SQP+VTGWGRRPAALRALSQRLS+GFNEA+NG
Sbjct: 181 AQKTTMAALRHLRQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNG 231


>gi|110349546|gb|ABG73248.1| class III HD-Zip protein HDZ34 [Pinus taeda]
          Length = 558

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 219/435 (50%), Positives = 300/435 (68%), Gaps = 13/435 (2%)

Query: 295 DGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWS 354
           D +LVVCERSLN       +P    FVRAEML SGYLIRPC G GSI++IVDHMDLE   
Sbjct: 1   DRNLVVCERSLNLGM----VPPNEGFVRAEMLSSGYLIRPCGGVGSIVYIVDHMDLEAGR 56

Query: 355 VPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGF 414
            PEVLRP+YESS ++AQK T+AALRHLR ++QE +   VTG   +PAALRALS R++R F
Sbjct: 57  APEVLRPMYESSAILAQKMTIAALRHLRSLAQEAAGEIVTGGTLQPAALRALSLRIARSF 116

Query: 415 NEALNGFTDEGWSMLESDGIDDVTVHVNSSPS-KMMGVQLSYVNGFPSMSN-AVLCAKAS 472
           N+A+N F ++GW  + SDG+DD+++ +NSS S + +G++ S  N   S  +  VLCAKAS
Sbjct: 117 NDAINSFPEDGWFSVASDGMDDISISLNSSWSPRTVGLKCSSSNNLWSDGDGGVLCAKAS 176

Query: 473 MLLQDVPPAILLRFLREHRSE---WADSSIDAYSAAAVKAGPCSLPVPRAGNFG-GQVIL 528
           MLLQ+VPPA+L+RFLREHRSE   WAD  +D  S+A ++ G            G  +V +
Sbjct: 177 MLLQNVPPAVLIRFLREHRSEWADWADCELDMSSSATLRTGVYGAAALAGAELGRREVPM 236

Query: 529 PLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDA 588
           PLAH+ EH+E +E++K E     R+  ++  +++LLQLC+G+DE A+G+CA+LVFAP+D 
Sbjct: 237 PLAHS-EHQEIMELVKFEGYDSARDGALVSKEMYLLQLCNGIDETAIGDCAQLVFAPVDG 295

Query: 589 SFSDDAPIIPSGFRIIPLDSG-KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKS 647
           + SDD P++PSGFR+IPLD+G  D    + TLDLAS LE G   + A  ++     + +S
Sbjct: 296 ALSDDIPLLPSGFRVIPLDTGFMDGYGLSCTLDLASMLEGGSDMDAAKTETGISSKNLRS 355

Query: 648 VITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEA 707
           ++TIAFQF +E H  ++V+  AR+Y+R ++ASVQRVA+A++P R GS  GLR   G+ E 
Sbjct: 356 IVTIAFQFGYETHNCDSVSVAARKYMRTVVASVQRVAMAIAP-RVGSTLGLRNLSGTTEV 414

Query: 708 HTLARWICQSYRCVF 722
             L + I  SYR  F
Sbjct: 415 LALVQRIVGSYRINF 429


>gi|110349530|gb|ABG73240.1| class III HD-Zip protein HDZ31 [Ceratopteris richardii]
          Length = 773

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 248/626 (39%), Positives = 357/626 (57%), Gaps = 33/626 (5%)

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQT--- 130
           WFQNRRCREKQRKE  RLQ  N KL AMN++L+EEN+RLQKQ +QL+ EN + RQQ    
Sbjct: 1   WFQNRRCREKQRKETGRLQHWNSKLNAMNQMLLEENERLQKQAAQLLVENQYLRQQLQLQ 60

Query: 131 ------QNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFL 184
                    A L T DTS ESVVTSGQH  +P     H  ++ S +   ++AE+ LTEFL
Sbjct: 61  HPQVDLNQRAVLHTADTSSESVVTSGQHQHSPS----HASQEWSVSQWSALAEKILTEFL 116

Query: 185 SKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTG-VAARACGLVGLDPTRVAEILKDRPS 243
           +KA+G     + +PGMKPGPDSI  + +   C G +AA+AC  V L   +VAEI+K+R  
Sbjct: 117 AKASGGMAGGIPLPGMKPGPDSIEAM-VRPSCGGHIAAQACSYVDLGVYKVAEIIKNRHM 175

Query: 244 WYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCER 303
           W  DC+  E++        G IEL++ Q+YAP+ L  A DF  LRYT +LE+G+LVVCE 
Sbjct: 176 WSYDCKKQEIMTSFHADHGGFIELVHTQMYAPSKLVAAWDFRTLRYTCLLENGNLVVCEG 235

Query: 304 SLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 363
           SL   Q    +   P FVRAEMLPSG+LIRPCE GGSI+ +VD ++  P +    LRPLY
Sbjct: 236 SLAAGQGAHEIAPLPGFVRAEMLPSGFLIRPCEQGGSIVMVVDDINSMPSTAANSLRPLY 295

Query: 364 ESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRP-AALRALSQRLSRGFNEALNGFT 422
           ++STL+A + T   L HLR   ++  +    G    P ++++  S RL RGFN+A+N   
Sbjct: 296 DTSTLLAWRLTCKVLNHLRAHPKDKGE---AGMLSNPISSVQGFSHRLVRGFNDAVNSSP 352

Query: 423 DEGWSMLESD-GIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
           D+GW  L S+    +VT+H+  S      ++    +   +    ++CAKA +LL+++  A
Sbjct: 353 DDGWVPLSSELSYSNVTIHIKPS---HHSIEFGANDTEAATRGGIICAKAFLLLRNLSSA 409

Query: 482 ILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLE 541
            L+ FLRE    W D   D     + K       + R        +     + E  E LE
Sbjct: 410 ALMSFLRERWVAWMDLDADLSVRDSCKTTGNDNLLKRK----FSSVKISESSSEQNEVLE 465

Query: 542 VIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGF 601
           V++L+     + + I   + F+LQ  S +++ +    A+L+FAPIDAS  DD+ ++PSGF
Sbjct: 466 VVRLQKPQPLKGENIPDFESFMLQFSSSMEDTSASAYAQLLFAPIDASVPDDSSLLPSGF 525

Query: 602 RIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHL 661
           R + L+   +     +TLDLAS+LE  P     S         T   +TI FQ+A++   
Sbjct: 526 RAMHLNVCPERLVSLQTLDLASSLEDQPRLQSQSPH------ETGCALTIVFQYAYKAEN 579

Query: 662 QENVASMARQYVRGIIASVQRVALAL 687
           +  V   A+Q ++ I+  +Q+ A++L
Sbjct: 580 RSVVTIKAQQNLQTIVELLQQAAVSL 605


>gi|110349536|gb|ABG73243.1| class III HD-Zip protein HDZ31B [Marsilea minuta]
          Length = 642

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 220/524 (41%), Positives = 317/524 (60%), Gaps = 24/524 (4%)

Query: 200 MKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPT 259
           MKPGPDSIG  A++  C GVAA+ACGLV L+P +V EI+K+RP W +DCR ++++     
Sbjct: 1   MKPGPDSIGAFALTRLCGGVAAQACGLVDLEPFKVGEIVKNRPLWLQDCRRLDILASFTA 60

Query: 260 GSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
              G +EL++ Q+YAPTTL  ARDFW LRYT  +EDGSLV+CERSL   Q    +P  P 
Sbjct: 61  DRGGLVELVHTQMYAPTTLDAARDFWTLRYTCCMEDGSLVICERSLAAGQGVQEIPVMPG 120

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR 379
           FVRAEML SG+LIRP E GG+++ ++D M+ +  S+ + +RPLY +S  +A++ T   L 
Sbjct: 121 FVRAEMLSSGFLIRPYEQGGAMVIVIDDMNFKSGSLLDGIRPLYTTSMTLARRMTYKVLC 180

Query: 380 HLRQISQEVSQPSVTGWGRRPAA-LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
           HLR  ++E ++ S+      PA  LR  S RL RGFN+A+N F DEGW  + +DG   V+
Sbjct: 181 HLRNFAKEKAEASLA--TNNPAVPLRGFSNRLIRGFNDAVNCFPDEGWVSIINDGPSTVS 238

Query: 439 VHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSS 498
           + +N  P+   G Q           N ++CAKAS+LLQ VPP +LL FLRE    WAD  
Sbjct: 239 IFINPPPN---GKQFGGTESGTRGRNGIICAKASLLLQGVPPPLLLHFLRERWIAWADIG 295

Query: 499 IDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMP 558
            D  S   V++    LP  +  +   QVI P+   +  +E LE+++++     R D +  
Sbjct: 296 TDVES---VRSSLNELPKKKPSSV--QVIQPI---VGQDEVLELVRVQKTRPLRVDEVFQ 347

Query: 559 SDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRT 618
            D  LLQLCS +DE   G  ++L+FAPIDAS  DDAP++PSGFR++ L S K+  + ++T
Sbjct: 348 PDSVLLQLCSSMDEIGTGEYSQLIFAPIDASVPDDAPLLPSGFRVMNLGSVKENSASSQT 407

Query: 619 LDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA 678
           LDLAS+LE   T N     SS       S++TIAFQ+ ++   ++ +A   +++V+ ++ 
Sbjct: 408 LDLASSLEDRSTNNTIPMRSSRGIQDQSSILTIAFQYMYKAESRDVIALNVQRHVQALVD 467

Query: 679 SVQRVALALS---PSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
            +Q+ A++L    P+      GL       EA  L + I  SYR
Sbjct: 468 VLQQAAISLRLHLPTTMTGQCGL-------EALVLVQQITDSYR 504


>gi|110349534|gb|ABG73242.1| class III HD-Zip protein HDZ31A [Marsilea minuta]
          Length = 642

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/523 (41%), Positives = 314/523 (60%), Gaps = 22/523 (4%)

Query: 200 MKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPT 259
           MKPGPDSIG  A++  C GVAA+ACG V L+P +V EI+K+RP W +DCR ++++     
Sbjct: 1   MKPGPDSIGAFALTRLCGGVAAQACGFVDLEPFKVGEIVKNRPLWLQDCRRLDILASFTA 60

Query: 260 GSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
              G++EL++ Q+Y+PTTL  ARDFW LRYT  +EDGSLV+CERSL   Q    +P    
Sbjct: 61  DRGGSVELVHTQMYSPTTLDAARDFWTLRYTCCMEDGSLVICERSLAAGQGVQEIPVMAG 120

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR 379
           FVRAEML SG+ IRP E GG+++ +VD M+ +  S+ E +RPLY +S  +A++ T   L 
Sbjct: 121 FVRAEMLSSGFFIRPYEQGGAMVIVVDDMNFKSGSLLEGIRPLYTTSMTLARRMTYKVLC 180

Query: 380 HLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTV 439
           HLR  ++E ++ S+         LR  S RL RGFN+A+N F DEGW  + +DG   V++
Sbjct: 181 HLRNFAKEKAEASLAT-NNPTVPLRGFSNRLIRGFNDAVNCFPDEGWISIINDGPSTVSI 239

Query: 440 HVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSI 499
            +N  P+   G Q+          N ++CAKAS+LLQ VPP +L+ FLRE    WAD   
Sbjct: 240 FINPPPN---GKQIGGTESGTRGRNGIICAKASLLLQGVPPPLLIHFLRERWIAWADIGA 296

Query: 500 DAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           D  S   V+A P  LP  +  +   QV+ P+   +  +E LEV++++     R D +   
Sbjct: 297 DVES---VRASPNELPKKKPSSV--QVLQPI---VGQDEVLEVVRVQKTRPLRVDEVFQP 348

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTL 619
           D  LLQLCS +DE   G  ++L+FAPIDAS  DD P++PSGFR++ L S K+  + ++TL
Sbjct: 349 DNVLLQLCSSMDEIGTGEYSQLIFAPIDASVPDDVPLLPSGFRVMNLGSVKENSASSQTL 408

Query: 620 DLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIAS 679
           DLAS+LE   T N     SS       S++TIAFQ+ ++   ++ +A   +++V+ ++  
Sbjct: 409 DLASSLEDQSTNNTIPMRSSRGIQDQSSILTIAFQYMYKAESRDVLALNLQRHVQALVDV 468

Query: 680 VQRVALALS---PSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +Q+ A++L    P+      GL       EA  L + I  SYR
Sbjct: 469 LQQAAISLRLHLPTTMTGQCGL-------EALVLVQQITNSYR 504


>gi|54290691|dbj|BAD62361.1| putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|54291065|dbj|BAD61742.1| putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
          Length = 559

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 217/460 (47%), Positives = 275/460 (59%), Gaps = 121/460 (26%)

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEML 326
           +  +QLYAPTTLAPA DFWLLRYTS+L DGSLVVCERSL++ Q GPSMP    F+R EML
Sbjct: 140 VFSLQLYAPTTLAPAHDFWLLRYTSILGDGSLVVCERSLSSKQGGPSMPLVQPFIRDEML 199

Query: 327 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQ 386
           PSG+LIRP +GGGS+IHIVDHMDLEPWSVPEV+RPLYESS L+AQK +MA       ++ 
Sbjct: 200 PSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMA-------VAY 252

Query: 387 EVSQPSVTGWGRRPAALRALSQR-------------------------------LSRGFN 415
           + ++  +TGWGR+ AAL ALSQ+                               L RGFN
Sbjct: 253 KDTRSVITGWGRKLAALHALSQKAHHVGLLNSRCFLVLAMNLQLKSVKNNFACSLFRGFN 312

Query: 416 EALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLL 475
           E LNG  D+GWS++ESDGIDDV + VNS  SK+ G   ++ +G   +S  VLCAKASMLL
Sbjct: 313 EVLNGLADDGWSVIESDGIDDVCISVNS--SKVTGCNATFSSGLTIVSTGVLCAKASMLL 370

Query: 476 QDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIE 535
           Q                                                 VILPLAHT E
Sbjct: 371 Q-------------------------------------------------VILPLAHTFE 381

Query: 536 HEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAP 595
             EFLEVIKL N  +Y +D ++  D+FLLQ+ +GV+E++ G C+EL+FAPIDASFSDD+P
Sbjct: 382 PAEFLEVIKLGNTRNY-QDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSP 440

Query: 596 IIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQC---GSTKSVITIA 652
           ++PS            TP                  ++ SG + + C    S+K+V+TIA
Sbjct: 441 LLPSA-----------TP-----------------WSRISGINCSGCAAAASSKAVMTIA 472

Query: 653 FQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRF 692
           FQF FE HLQ +V +MA+QY+  II+SVQR+A+ LS SR 
Sbjct: 473 FQFVFESHLQGSVPAMAQQYMCSIISSVQRIAVVLSSSRL 512


>gi|224035091|gb|ACN36621.1| unknown [Zea mays]
          Length = 425

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 182/293 (62%), Positives = 237/293 (80%), Gaps = 3/293 (1%)

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           + SDG +DVT+ +NSSP+K++G  ++    F ++   +LCAKASMLLQ+VPPA+L+RFLR
Sbjct: 1   MSSDGAEDVTIAINSSPNKLIGPHVNSSQLFTAIGGGILCAKASMLLQNVPPALLVRFLR 60

Query: 489 EHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLEN 547
           EHRSEWAD  +DAYSAAA++A P ++P  RA  F G QVILPLAHT+EHEEFLEVI+LE 
Sbjct: 61  EHRSEWADPGVDAYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEG 120

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
            +   +++++  D++LLQLCSGVDENA G CA+LVFAPID SF+DDAP++PSGFR+IPLD
Sbjct: 121 HSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLD 180

Query: 608 SGKDTPSPNRTLDLASALEVGPTGN-KASGDSSTQCGSTKSVITIAFQFAFEMHLQENVA 666
           +  D PS  RTLDLAS LEVG  G  +AS D+S+ C +T+SV+TIAFQF++E HL+E+VA
Sbjct: 181 AKTDPPSGTRTLDLASTLEVGSGGTTRASSDASSTC-NTRSVLTIAFQFSYENHLRESVA 239

Query: 667 SMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +MARQYVR ++ASVQRVA+A++PSR G    ++  PGSPEAHTLARWI +SYR
Sbjct: 240 AMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYR 292


>gi|444436400|gb|AGE09568.1| HB8-like protein, partial [Eucalyptus cladocalyx]
          Length = 212

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 179/212 (84%), Positives = 195/212 (91%)

Query: 477 DVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEH 536
           +VPPA+LLRFLREHRSEWADSSIDAYSAAA+KA PC++P  R G FG QVILPLAHTIEH
Sbjct: 1   NVPPAVLLRFLREHRSEWADSSIDAYSAAAIKASPCNMPGTRIGGFGSQVILPLAHTIEH 60

Query: 537 EEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPI 596
           EEF+EV+KLENM HYR+DMIMPSDIFLLQLC+GVDENAVG CAEL+FAPIDASFSDDAPI
Sbjct: 61  EEFMEVVKLENMGHYRDDMIMPSDIFLLQLCNGVDENAVGTCAELIFAPIDASFSDDAPI 120

Query: 597 IPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFA 656
           IPSGFRIIPLD G D  SPNRTLDLASAL+VGPTGNKA GD+S   G+TKSV+TIAFQFA
Sbjct: 121 IPSGFRIIPLDPGSDAASPNRTLDLASALDVGPTGNKAVGDNSGHSGNTKSVMTIAFQFA 180

Query: 657 FEMHLQENVASMARQYVRGIIASVQRVALALS 688
           FE+HLQENVASMARQY+R IIASVQRVALALS
Sbjct: 181 FELHLQENVASMARQYLRSIIASVQRVALALS 212


>gi|326493562|dbj|BAJ85242.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 460

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/340 (57%), Positives = 251/340 (73%), Gaps = 9/340 (2%)

Query: 381 LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
           LRQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DGI+DV + 
Sbjct: 2   LRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMAGDGIEDVIIA 61

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSID 500
            NS   K +    +  N F +    V+CAKASMLLQ VPPA+L+RFLREHRSEWAD + D
Sbjct: 62  CNS---KKIRSNNTAPNAFIA-PGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFD 117

Query: 501 AYSAAAVKAGPCSLPVPRAGNFGG-QVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           AYSA+A+K+  CSLP  R   F G Q+I+PLAHT+E+EE LEV++LE  A   ++ ++  
Sbjct: 118 AYSASALKSSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQA--LDEGLLSR 175

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTL 619
           DI LLQ C+G+DE ++G+C +LVFAPID  F DDAP+I SGFR+IPLD   D     RTL
Sbjct: 176 DIHLLQFCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGAPTGRTL 235

Query: 620 DLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIAS 679
           DLAS+LE G T  +ASG++   C + +SV+TIAFQF +EMHLQ++VA+MARQYVR I+++
Sbjct: 236 DLASSLEAGSTTLQASGNAD-DC-NLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSA 293

Query: 680 VQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           VQRV++A+SPSR G NA  +   G PEA TLARWICQSYR
Sbjct: 294 VQRVSMAISPSRSGLNAEQKIISGFPEAATLARWICQSYR 333


>gi|125569402|gb|EAZ10917.1| hypothetical protein OsJ_00759 [Oryza sativa Japonica Group]
          Length = 507

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/250 (74%), Positives = 206/250 (82%), Gaps = 18/250 (7%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN----------------TF 125
           EKQRKE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVY++                  
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 126 FRQQTQNAATLAT-TDTSCESVVTSGQHHLTPQQQ-HQHPPRDASPAGLLSIAEETLTEF 183
            +        LAT TDTSCESVVTSG HH   Q    Q PPRDASPAGL+SIAEETLTEF
Sbjct: 121 PQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLTEF 180

Query: 184 LSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPS 243
           LSKATGTAVEW+QMPGMKPGPDSIGI+AISHGC GVAARACGLVG++P +VAEILKDRP 
Sbjct: 181 LSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPL 240

Query: 244 WYRDCRSVEV 253
           W RDCRS++V
Sbjct: 241 WLRDCRSMDV 250



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/126 (50%), Positives = 82/126 (65%), Gaps = 14/126 (11%)

Query: 611 DTPSPNRTLDLASALEVGPTGNK--------ASGDSSTQCGSTKSVITIAFQFAFEMHLQ 662
           DT SPN TLDLAS LE     ++            ++    S+K+V+TIAFQFAF+ HLQ
Sbjct: 251 DTSSPNCTLDLASTLEAATPRSRISGVNGGGGGCAAAAASSSSKAVMTIAFQFAFDGHLQ 310

Query: 663 ENVASMARQYVRGIIASVQRVALALSPSRF----GSNAGLRPPPGSPEAHTLARWICQSY 718
           ++VA+MARQY+R II+SVQR+A+ALS SR        A  +  P +PEA TL RWICQSY
Sbjct: 311 DSVAAMARQYMRNIISSVQRIAVALSSSRLVLPGAGAAAAQLSPVTPEAATLPRWICQSY 370

Query: 719 RCVFYF 724
           R  F+F
Sbjct: 371 R--FHF 374


>gi|46408857|emb|CAD89206.1| HD-ZIP protein [Oryza sativa Japonica Group]
          Length = 451

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 184/336 (54%), Positives = 240/336 (71%), Gaps = 5/336 (1%)

Query: 384 ISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNS 443
           I+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DG++DV +  NS
Sbjct: 1   IAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDGVEDVVIACNS 60

Query: 444 SPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYS 503
           +             G P     ++CAKASMLLQ VPPA+L+RFLREHRSEWAD +IDAY 
Sbjct: 61  TKKIRSNSNAGIAFGAP---GGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYL 117

Query: 504 AAAVKAGPCSLPVPRAGNFGG-QVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIF 562
           A+ +K   CSL   R   F G Q+I+PLAHT+E+EE LEV++LE      ++ ++  DI 
Sbjct: 118 ASTLKTSACSLTGLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIH 177

Query: 563 LLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLA 622
           LLQLC+G+DE +VG+  +LVFAPID  F D+ P+I SGFR+IPLD   D  S  RTLDLA
Sbjct: 178 LLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLISSGFRVIPLDMKTDGASSGRTLDLA 236

Query: 623 SALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQR 682
           S+LEVG    +ASGD+S    + +SV+TIAFQF +E+HLQ++VA+MARQYVR I+++VQR
Sbjct: 237 SSLEVGSATAQASGDASADDCNLRSVLTIAFQFPYELHLQDSVAAMARQYVRSIVSAVQR 296

Query: 683 VALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
           V++A+SP + G NAG R   G PEA TLARW+CQSY
Sbjct: 297 VSMAISPPQTGLNAGQRIISGFPEAATLARWVCQSY 332


>gi|41745612|gb|AAS10176.1| PHABULOSA-like protein [Antirrhinum majus]
          Length = 231

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 167/231 (72%), Positives = 197/231 (85%)

Query: 190 TAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCR 249
           TAV+WVQM GMKPGPDSIGIVAIS  C+G+AARACGLV L+PT+VAEILKDR SWYRDCR
Sbjct: 1   TAVDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLVSLEPTKVAEILKDRLSWYRDCR 60

Query: 250 SVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQ 309
            +++ + +PTG+ GTIEL+YMQ YAPTTLA ARDFW +RYT+ LEDGSLV+CERSL ++ 
Sbjct: 61  CLDIASAIPTGNGGTIELMYMQTYAPTTLASARDFWTMRYTTSLEDGSLVICERSLTSST 120

Query: 310 NGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLI 369
            GP+ P A  FVRAEMLPSG+LIRPC+GGGSIIHIVDH+DL+ WSVPEVLRPLYESS ++
Sbjct: 121 GGPAGPLATCFVRAEMLPSGFLIRPCDGGGSIIHIVDHLDLDAWSVPEVLRPLYESSKIL 180

Query: 370 AQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
           AQK T+AALRH+RQI+QE +       GR+PA LR LSQRL RGFN+ALNG
Sbjct: 181 AQKITVAALRHIRQIAQESNGEIQCSGGRQPAVLRTLSQRLCRGFNDALNG 231


>gi|294462854|gb|ADE76969.1| unknown [Picea sitchensis]
          Length = 353

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 175/249 (70%), Positives = 208/249 (83%), Gaps = 3/249 (1%)

Query: 473 MLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGG-QVILPLA 531
           MLLQ+VPPA+L+RFLREHRSEWADS+IDAYSAAA+KA P S+P  RAG F G QVILPLA
Sbjct: 1   MLLQNVPPALLVRFLREHRSEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLA 60

Query: 532 HTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFS 591
           HT+EHEEFLEVIKLE     +E+ ++  D+FLLQLCSG+DENA G CAELVFAPID SF+
Sbjct: 61  HTVEHEEFLEVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDENAAGACAELVFAPIDESFA 120

Query: 592 DDAPIIPSGFRIIPLDSGKD-TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVIT 650
           DDAP++PSGFR+IPL+S  D +  PNRTLDLASALEVG  G + SGDS     + +SV+T
Sbjct: 121 DDAPLLPSGFRVIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGAN-SNLRSVLT 179

Query: 651 IAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTL 710
           IAFQF +E HL+ENVA+MARQYVR ++ASVQRVA+AL+PSR  ++ G RPPPG+PEA TL
Sbjct: 180 IAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMALAPSRLSAHVGPRPPPGTPEALTL 239

Query: 711 ARWICQSYR 719
           ARWICQSYR
Sbjct: 240 ARWICQSYR 248


>gi|194708610|gb|ACF88389.1| unknown [Zea mays]
          Length = 390

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 169/257 (65%), Positives = 209/257 (81%), Gaps = 5/257 (1%)

Query: 467 LCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQ 525
           +CAKASMLLQ+VPPA+L+RFLREHRSEWAD  IDAYS A+++A P ++P  RAG F G Q
Sbjct: 1   MCAKASMLLQNVPPALLVRFLREHRSEWADPGIDAYSVASLRANPYTVPGLRAGGFMGNQ 60

Query: 526 VILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAP 585
           VILPLA T+EHEE LEVI+LE      E+++M  D+FLLQLCSGVDE+A G CA+LVFAP
Sbjct: 61  VILPLARTLEHEESLEVIRLEGHGFSHEEVLMSRDMFLLQLCSGVDEDAPGACAQLVFAP 120

Query: 586 IDASFSDDAPIIPSGFRIIPLDSGKDTPSP-NRTLDLASALEVGPTGN--KASGDSSTQC 642
           ID SF+DDAP++PSGFR+IPLD+  D P+   RTLDLASALEVG  G+  +AS D S  C
Sbjct: 121 IDESFADDAPLLPSGFRVIPLDAKTDVPTATTRTLDLASALEVGSGGSGMRASCDGSGTC 180

Query: 643 GSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPP 702
            +T+SV+TIAFQF+FE HL+E+VA+MA+QYVRG++ASVQRVA+A++PSR GS   L+ PP
Sbjct: 181 -ATRSVLTIAFQFSFENHLRESVAAMAKQYVRGVMASVQRVAMAIAPSRLGSRIELKHPP 239

Query: 703 GSPEAHTLARWICQSYR 719
           GSPEA  LA WI +SYR
Sbjct: 240 GSPEALALATWIGRSYR 256


>gi|110349538|gb|ABG73244.1| class III HD-Zip protein HDZ32 [Marsilea minuta]
          Length = 638

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 196/490 (40%), Positives = 291/490 (59%), Gaps = 28/490 (5%)

Query: 200 MKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPT 259
           MKPGPDSIG   ++  C GVAA+AC L  ++P ++AE +KDRPSW  DCR +E++     
Sbjct: 1   MKPGPDSIGAFPLTRLCGGVAAQACCLADMEPFKIAETVKDRPSWLPDCRKLEILASFSA 60

Query: 260 GSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
              G +EL++ Q+YAPT L    +FW LRYT  +EDGSLVVCERSL   Q    MP  P 
Sbjct: 61  DRGGVVELVHTQMYAPTVLYVPWEFWSLRYTCCMEDGSLVVCERSLAVGQGVQDMPITPG 120

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR 379
           F RAEML S +LIRP E G S++ +VD M+ +  S+ E  +PLY++S ++A+K T  AL 
Sbjct: 121 FARAEMLTSEFLIRPYEQGVSMVVVVDDMNFKSGSLLEGFQPLYDTSVILAKKATCRALS 180

Query: 380 HLRQISQ---EVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
           +LR + +   EVS PS        ++LR LS RL RGFN+A+N F DEGW  + + G + 
Sbjct: 181 YLRSLVKEKAEVSNPS--------SSLRGLSHRLVRGFNDAVNCFPDEGWVSVINSGPNT 232

Query: 437 VTVHVN-SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWA 495
           ++VH+N +S SK +G   S +         ++C KAS++L D PP++LL FL+E  + WA
Sbjct: 233 LSVHINPTSHSKQLGGNESGI----VTKGGIVCVKASLVLHDTPPSLLLCFLKEKWTTWA 288

Query: 496 DSSID-AYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
           +  +D  Y+ + + A   S    +      Q + PL   +  EE +E ++++     R +
Sbjct: 289 EFDMDLGYANSRIFANDLS----KKKFSTVQKLQPL---VGQEEVVEFMRVQESDVARFN 341

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPS 614
            +   D FLLQ+C+  +E   G C +L+ APIDAS S+   ++PSGFRI+ L+S K+   
Sbjct: 342 GVFTPDKFLLQVCNNSEEVKPGECVQLICAPIDASMSEYVALLPSGFRILHLNSIKEKLM 401

Query: 615 PNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVR 674
            ++TLDLAS+LE G    K    +S     + SV+ I FQF ++    + +   A+ +V+
Sbjct: 402 SSQTLDLASSLEYG----KTEMINSQSAQGSNSVLNIVFQFLYKPENHDIIVPNAQHHVQ 457

Query: 675 GIIASVQRVA 684
            I+  +Q  A
Sbjct: 458 AIVELLQHAA 467


>gi|110349560|gb|ABG73255.1| class III HD-Zip protein HDZ31 [Austrobaileya scandens]
          Length = 181

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 154/185 (83%), Positives = 166/185 (89%), Gaps = 6/185 (3%)

Query: 25  GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
           GKYVRYT EQVEALER+Y ECPKPSSMRRQQL+REC IL+NIEPKQIKVWFQNRRCR KQ
Sbjct: 1   GKYVRYTAEQVEALERVYTECPKPSSMRRQQLVRECSILANIEPKQIKVWFQNRRCRVKQ 60

Query: 85  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCE 144
           RKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQL+YEN + RQQ QN A++ATTDTSCE
Sbjct: 61  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLLYENGYMRQQLQN-ASVATTDTSCE 119

Query: 145 SVVTSGQHHLTPQQQHQHP-PRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKP 202
           SV+TSGQH   P    QHP P+DA +PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKP
Sbjct: 120 SVLTSGQHQQNP---VQHPLPKDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 176

Query: 203 GPDSI 207
           GPD+I
Sbjct: 177 GPDAI 181


>gi|297596285|ref|NP_001042315.2| Os01g0200300 [Oryza sativa Japonica Group]
 gi|255672974|dbj|BAF04229.2| Os01g0200300 [Oryza sativa Japonica Group]
          Length = 394

 Score =  282 bits (722), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 151/264 (57%), Positives = 195/264 (73%), Gaps = 15/264 (5%)

Query: 473 MLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAH 532
           MLLQDV P  LL+FLREHRS+WADS++DA+ A+ +K   C+LP+ R G F GQVILPLAH
Sbjct: 1   MLLQDVSPPSLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSGQVILPLAH 60

Query: 533 TIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSD 592
           T E EEFLEVIKL N ++Y +D ++  D+FLLQ+ +GV+E++ G C+EL+FAPIDASFSD
Sbjct: 61  TFEPEEFLEVIKLGNASNY-QDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSD 119

Query: 593 DAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNK--------ASGDSSTQCGS 644
           D+P++PSGFRIIP+DS  DT SPN TLDLAS LE     ++            ++    S
Sbjct: 120 DSPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVNGGGGGCAAAAASSS 179

Query: 645 TKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRF----GSNAGLRP 700
           +K+V+TIAFQFAF+ HLQ++VA+MARQY+R II+SVQR+A+ALS SR        A  + 
Sbjct: 180 SKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAGAAAAQL 239

Query: 701 PPGSPEAHTLARWICQSYRCVFYF 724
            P +PEA TL RWICQSYR  F+F
Sbjct: 240 SPVTPEAATLPRWICQSYR--FHF 261


>gi|218198891|gb|EEC81318.1| hypothetical protein OsI_24480 [Oryza sativa Indica Group]
          Length = 330

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 141/243 (58%), Positives = 170/243 (69%), Gaps = 38/243 (15%)

Query: 270 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSG 329
           +QLYAPTTLAPA DFWLLRYTS+L DGSLVVCERSL++ Q GPSMP    F+R EMLPSG
Sbjct: 19  LQLYAPTTLAPAHDFWLLRYTSILGDGSLVVCERSLSSKQGGPSMPLVQPFIRDEMLPSG 78

Query: 330 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMA-----ALRHLRQI 384
           +LIRP +GGGS+IHIVDHMDLEPWSVPEV+RPLYESS L+AQK +MA     +LR LRQ+
Sbjct: 79  FLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMASCKIQSLRCLRQV 138

Query: 385 SQEVSQPSVTGWGRRPAALRALSQR-------------------------------LSRG 413
           + + ++  +TGWGR+ AAL ALSQ+                               L RG
Sbjct: 139 AYKDTRSVITGWGRKLAALHALSQKAHHVGLLNSRCFLVLAMNLQFKSVKNNFACSLFRG 198

Query: 414 FNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASM 473
           FNE LNG  D+GWS++ESDGIDDV + VNS  SK+ G   ++ +G   +S  VLCAKASM
Sbjct: 199 FNEVLNGLADDGWSVIESDGIDDVCISVNS--SKVTGCNATFSSGLTIVSTGVLCAKASM 256

Query: 474 LLQ 476
           LLQ
Sbjct: 257 LLQ 259


>gi|226530146|ref|NP_001146177.1| uncharacterized protein LOC100279747 [Zea mays]
 gi|219886071|gb|ACL53410.1| unknown [Zea mays]
          Length = 293

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 132/236 (55%), Positives = 172/236 (72%), Gaps = 5/236 (2%)

Query: 374 TMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDG 433
           T  ALRHLRQI+QE S   V   GR+PA LR  SQRLSRGFN+A++GF D+GWS++  DG
Sbjct: 2   TTTALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMCGDG 61

Query: 434 IDDVTVHVNSSPSKMMGVQLSYVNGFPSMS-NAVLCAKASMLLQDVPPAILLRFLREHRS 492
           ++DV +  NS   K +    +   GF +     ++CAKASMLLQ VPPA+L+RFLREHRS
Sbjct: 62  MEDVIIACNS---KKIRSSSNPATGFGAPGPGGIICAKASMLLQSVPPAVLVRFLREHRS 118

Query: 493 EWADSSIDAYSAAAVKAGPCSLPVPRAGNFGG-QVILPLAHTIEHEEFLEVIKLENMAHY 551
           EWAD + DAYSA+A+K  PCSLP  R   F G Q+I+PLAHT+E+EE LEV++LE     
Sbjct: 119 EWADYNFDAYSASALKTSPCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQTLT 178

Query: 552 REDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
            ++ ++  DI LLQLC+G+DE ++G+C +LVFAPID  F DDAP++ SGFR+IPLD
Sbjct: 179 HDEGLLSRDIHLLQLCTGMDEKSMGSCFQLVFAPIDELFPDDAPLVSSGFRVIPLD 234


>gi|326522983|dbj|BAJ88537.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 190

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 133/181 (73%), Positives = 153/181 (84%), Gaps = 13/181 (7%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           MD+GKYVRYTP+QVE LER+Y +CPKP+S RRQQL+RECPIL+NIE +QIKVWFQNRRCR
Sbjct: 22  MDSGKYVRYTPDQVEMLERVYADCPKPTSSRRQQLLRECPILANIEARQIKVWFQNRRCR 81

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           +K RKE+SRL++VNRK++AMNKLLMEEN+RLQKQVSQLV+EN   RQQ QN  T    DT
Sbjct: 82  DKLRKESSRLESVNRKVSAMNKLLMEENERLQKQVSQLVHENAQVRQQLQN--TSMANDT 139

Query: 142 SCESVVTSGQHHLTPQQQHQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
           SCES +T      TP    Q+P RDAS P+GLLSIAEETLTEFLSKATGTA+EWVQMPGM
Sbjct: 140 SCESNLT------TP----QNPIRDASNPSGLLSIAEETLTEFLSKATGTAIEWVQMPGM 189

Query: 201 K 201
           K
Sbjct: 190 K 190


>gi|414871782|tpg|DAA50339.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 174

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 129/171 (75%), Positives = 137/171 (80%), Gaps = 2/171 (1%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           +AV  GG       GG    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECP
Sbjct: 5   LAVVGGGKDRPSPGGGGAPQVDTGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECP 64

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS+LVY
Sbjct: 65  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVY 124

Query: 122 ENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDA-SPAG 171
           EN + RQQ  N +  ATTDTSCESVVTSGQHH         P RDA +PAG
Sbjct: 125 ENGYMRQQLHNPSA-ATTDTSCESVVTSGQHHQQQNPAAPRPQRDANNPAG 174


>gi|110349562|gb|ABG73256.1| class III HD-Zip protein HDZ32A [Austrobaileya scandens]
          Length = 129

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 123/134 (91%), Positives = 126/134 (94%), Gaps = 5/134 (3%)

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA 133
           WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQQTQN 
Sbjct: 1   WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQTQNT 60

Query: 134 ATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 193
           A + TTDTSCESVVTSGQHHLTP    QHPPRDASPAGLLSIAEETLTEFLSKATGTAVE
Sbjct: 61  A-ITTTDTSCESVVTSGQHHLTP----QHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 115

Query: 194 WVQMPGMKPGPDSI 207
           W+QMPGMKPGPDSI
Sbjct: 116 WIQMPGMKPGPDSI 129


>gi|109729910|tpg|DAA05769.1| TPA_inf: class III HD-Zip protein CNA2 [Medicago truncatula]
          Length = 287

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 114/155 (73%), Positives = 136/155 (87%)

Query: 566 LCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASAL 625
           LCSG+DENA+G CAEL+FAPIDASF+DDAP++PSGFRIIPL+SGK++ SPNRTLDLASAL
Sbjct: 1   LCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLESGKESSSPNRTLDLASAL 60

Query: 626 EVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVAL 685
           ++GPTGN+AS D++   G  +SV+TIAF+FA+E H+QENVA MARQYVR II+SVQRVAL
Sbjct: 61  DIGPTGNRASSDNAGNSGCVRSVMTIAFEFAYESHMQENVACMARQYVRSIISSVQRVAL 120

Query: 686 ALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRC 720
           ALSPS   S+AGLR P G+PEA TLA WIC SYRC
Sbjct: 121 ALSPSNLSSHAGLRSPLGTPEAQTLAHWICNSYRC 155


>gi|110349564|gb|ABG73257.1| class III HD-Zip protein HDZ32B [Austrobaileya scandens]
          Length = 129

 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 121/134 (90%), Positives = 124/134 (92%), Gaps = 5/134 (3%)

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA 133
           WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQQTQN 
Sbjct: 1   WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQTQNT 60

Query: 134 ATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 193
           A + TTD SCESVVTSGQHHLTP    QH PRDASPAGLLSIAEETLTEFLSKATGTAVE
Sbjct: 61  A-ITTTDASCESVVTSGQHHLTP----QHLPRDASPAGLLSIAEETLTEFLSKATGTAVE 115

Query: 194 WVQMPGMKPGPDSI 207
           W+QMPGMKPGPDSI
Sbjct: 116 WIQMPGMKPGPDSI 129


>gi|224034025|gb|ACN36088.1| unknown [Zea mays]
          Length = 333

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 116/196 (59%), Positives = 151/196 (77%), Gaps = 1/196 (0%)

Query: 524 GQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVF 583
           GQ+I+PLAHT+E+EE LEV++LE      ++ ++  DI LLQLC+G+DE +VG+  +LVF
Sbjct: 6   GQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVF 65

Query: 584 APIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCG 643
           APID  F DDAP+I SGFR+IPLD   D  S  RTLDLAS+L+VG    +ASG+S   C 
Sbjct: 66  APIDEHFPDDAPLISSGFRVIPLDVKTDGVSSGRTLDLASSLDVGSAAPQASGESPDDC- 124

Query: 644 STKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPG 703
           S +SV+TIAFQF +EMHLQ++VA+MARQYVR +I++VQRV++A+SPS+ G NAG R   G
Sbjct: 125 SLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSG 184

Query: 704 SPEAHTLARWICQSYR 719
            PEA TLARW+CQSY 
Sbjct: 185 FPEAATLARWVCQSYH 200


>gi|227809738|gb|ACP41061.1| unknown [Mesembryanthemum aitonis]
          Length = 125

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 114/130 (87%), Positives = 118/130 (90%), Gaps = 5/130 (3%)

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN +FRQQ
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRQQ 60

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATG 189
           TQ    +A+ DTSCESVVTSGQHHLTP    QHPPRDASPAGLLSIAEETL EFLSKATG
Sbjct: 61  TQKPG-IASKDTSCESVVTSGQHHLTP----QHPPRDASPAGLLSIAEETLAEFLSKATG 115

Query: 190 TAVEWVQMPG 199
           TAV+WVQMPG
Sbjct: 116 TAVDWVQMPG 125


>gi|397135778|gb|AFO11386.1| revoluta, partial [Brassica rapa subsp. pekinensis]
 gi|397135780|gb|AFO11387.1| revoluta, partial [Brassica rapa subsp. pekinensis]
 gi|397135784|gb|AFO11389.1| revoluta, partial [Brassica juncea]
 gi|397135790|gb|AFO11392.1| revoluta, partial [Brassica napus]
          Length = 143

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 111/151 (73%), Positives = 124/151 (82%), Gaps = 11/151 (7%)

Query: 140 DTSCESVVTSGQHHLTPQQQHQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           D SC+SVVT+ QH L          RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMP
Sbjct: 3   DPSCDSVVTTPQHSL----------RDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMP 52

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDS+GI AIS  C+GVAARACGLV L+P ++AEILKDRPSW+RDCRS+EV  + P
Sbjct: 53  GMKPGPDSVGIFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFP 112

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRY 289
            G+ GTIEL+YMQ YAPTTLAPARDFW LRY
Sbjct: 113 AGNGGTIELVYMQTYAPTTLAPARDFWTLRY 143


>gi|224165518|ref|XP_002338824.1| predicted protein [Populus trichocarpa]
 gi|222873518|gb|EEF10649.1| predicted protein [Populus trichocarpa]
          Length = 142

 Score =  228 bits (581), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 107/117 (91%), Positives = 111/117 (94%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           G   + MDNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIKVWF
Sbjct: 8   GKNPINMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWF 67

Query: 76  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
           QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQN
Sbjct: 68  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQN 124


>gi|227809744|gb|ACP41064.1| unknown [Carruanthus ringens]
 gi|227809746|gb|ACP41065.1| unknown [Cephalophyllum pillansii]
 gi|227809750|gb|ACP41067.1| unknown [Scopelogena bruynsii]
 gi|227809752|gb|ACP41068.1| unknown [Pleiospilos simulans]
 gi|227809754|gb|ACP41069.1| unknown [Delosperma echinatum]
          Length = 125

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 113/130 (86%), Positives = 116/130 (89%), Gaps = 5/130 (3%)

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN +FR Q
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATG 189
           T     LA+ DTSCESVVTSGQHHLTP    QHPPRDASPAGLLSIAEETL EFLSKATG
Sbjct: 61  TSKTG-LASKDTSCESVVTSGQHHLTP----QHPPRDASPAGLLSIAEETLAEFLSKATG 115

Query: 190 TAVEWVQMPG 199
           TAV+WVQMPG
Sbjct: 116 TAVDWVQMPG 125


>gi|326496473|dbj|BAJ94698.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 167

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 101/143 (70%), Positives = 120/143 (83%)

Query: 234 VAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVL 293
           V EILKDRPSW+RDCRS+EV  VLP  + GTIEL+Y QLYAPTTL PARDFW LRYT+++
Sbjct: 1   VVEILKDRPSWFRDCRSLEVFTVLPGANGGTIELVYTQLYAPTTLVPARDFWTLRYTTIV 60

Query: 294 EDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPW 353
           EDGSLVVCERSL+ ++ GPS   A  FVR EMLPSGYL+RPC+GGGSI+HIV H++ E W
Sbjct: 61  EDGSLVVCERSLSGSRGGPSAASAQQFVRDEMLPSGYLVRPCDGGGSIVHIVHHLEFEAW 120

Query: 354 SVPEVLRPLYESSTLIAQKTTMA 376
           ++PEVLRPLYESS ++AQK T A
Sbjct: 121 NIPEVLRPLYESSRVVAQKMTTA 143


>gi|110349558|gb|ABG73254.1| class III HD-Zip protein HDZ33 [Cycas revoluta]
          Length = 129

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 114/134 (85%), Positives = 120/134 (89%), Gaps = 7/134 (5%)

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA 133
           WFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY+N   RQQ Q A
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYDNGCLRQQIQ-A 59

Query: 134 ATLATTDTSCESVVTSG--QHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTA 191
           A++ATTDTSCESVVTSG  QHHLT     QHPPRDASPAGLLSIAEETL +FLSKATGTA
Sbjct: 60  ASMATTDTSCESVVTSGPRQHHLT----SQHPPRDASPAGLLSIAEETLAQFLSKATGTA 115

Query: 192 VEWVQMPGMKPGPD 205
           V+W+QMPGMKPGPD
Sbjct: 116 VDWIQMPGMKPGPD 129


>gi|397135786|gb|AFO11390.1| revoluta, partial [Brassica juncea]
          Length = 143

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 110/151 (72%), Positives = 123/151 (81%), Gaps = 11/151 (7%)

Query: 140 DTSCESVVTSGQHHLTPQQQHQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           D SC+SVVT+ QH L          RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMP
Sbjct: 3   DPSCDSVVTTPQHSL----------RDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMP 52

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDS+GI AIS  C+GVAARACGLV L+P ++AEILKDRPSW+RDCRS+EV  + P
Sbjct: 53  GMKPGPDSVGIFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFP 112

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRY 289
            G+ GTIEL+YMQ YAPTTLAPA DFW LRY
Sbjct: 113 AGNGGTIELVYMQTYAPTTLAPASDFWTLRY 143


>gi|12002295|gb|AAG43283.1| HD-zipper protein [Oryza sativa]
          Length = 233

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 108/158 (68%), Positives = 131/158 (82%), Gaps = 2/158 (1%)

Query: 563 LLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLA 622
           LLQLCSGVDENA G CA+LVFAPID SF+DDAP++PSGFR+IPLD   D PS  RTLDLA
Sbjct: 1   LLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDGKTDAPSATRTLDLA 60

Query: 623 SALEVGPTGN-KASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQ 681
           S LEVG  G  +AS D+S+ C +T+SV+TIAFQF++E HL+E+VA+MARQYVR ++ASVQ
Sbjct: 61  STLEVGSGGTTRASSDTSSTC-NTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQ 119

Query: 682 RVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           RVA+A++PSR G     + PPGSPEAHTLARWI +SYR
Sbjct: 120 RVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYR 157


>gi|397135793|gb|AFO11393.1| revoluta, partial [Brassica carinata]
          Length = 143

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 110/151 (72%), Positives = 123/151 (81%), Gaps = 11/151 (7%)

Query: 140 DTSCESVVTSGQHHLTPQQQHQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           D SC+SVVT+ QH L          RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMP
Sbjct: 3   DPSCDSVVTTPQHSL----------RDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMP 52

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDS+GI AIS  C+GVAARACGLV L+P ++AEILKDRPSW+RDCRS+EV  + P
Sbjct: 53  GMKPGPDSVGIFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFP 112

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRY 289
            G+ GTI L+YMQ YAPTTLAPARDFW LRY
Sbjct: 113 AGNGGTIVLVYMQTYAPTTLAPARDFWTLRY 143


>gi|227809740|gb|ACP41062.1| unknown [Mossia intervallaris]
          Length = 125

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 112/130 (86%), Positives = 115/130 (88%), Gaps = 5/130 (3%)

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN +FR Q
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATG 189
           T     LA+ DTSCESVVTSGQHHLTP    QHPPRDASPAGLLSIAEETL EFLSKATG
Sbjct: 61  TSKTG-LASKDTSCESVVTSGQHHLTP----QHPPRDASPAGLLSIAEETLAEFLSKATG 115

Query: 190 TAVEWVQMPG 199
           TAV+WVQM G
Sbjct: 116 TAVDWVQMIG 125


>gi|227809742|gb|ACP41063.1| unknown [Polymita steenbokensis]
          Length = 125

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 112/130 (86%), Positives = 115/130 (88%), Gaps = 5/130 (3%)

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN +FR Q
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATG 189
           T     LA+ DTSCESVVTSGQHHLTP    QHPPRDASPAGLLSIAEETL EFLSKATG
Sbjct: 61  TSKTG-LASKDTSCESVVTSGQHHLTP----QHPPRDASPAGLLSIAEETLAEFLSKATG 115

Query: 190 TAVEWVQMPG 199
           TAV+WVQM G
Sbjct: 116 TAVDWVQMLG 125


>gi|118482717|gb|ABK93277.1| unknown [Populus trichocarpa]
          Length = 294

 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 104/159 (65%), Positives = 129/159 (81%)

Query: 561 IFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLD 620
           ++LLQLCSGVDENA+G CA+LVFAPID SF+DDAP++PSGFR+IPLD   D P+  RTLD
Sbjct: 1   MYLLQLCSGVDENALGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKTDAPAATRTLD 60

Query: 621 LASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASV 680
           LAS LEVGP G + + ++ T   + +SV+TIAFQF FE H ++NVA+MARQYVRG++ASV
Sbjct: 61  LASTLEVGPGGARPASEADTNSYNLRSVLTIAFQFTFENHFRDNVAAMARQYVRGVVASV 120

Query: 681 QRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           QRVA+A+SPSR  SN G +  P SPEA TLARWI +SYR
Sbjct: 121 QRVAMAISPSRLSSNMGPKSLPVSPEALTLARWIYRSYR 159


>gi|226506820|ref|NP_001141882.1| uncharacterized protein LOC100274025 [Zea mays]
 gi|194706286|gb|ACF87227.1| unknown [Zea mays]
          Length = 292

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 106/160 (66%), Positives = 132/160 (82%), Gaps = 2/160 (1%)

Query: 561 IFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLD 620
           ++LLQLCSGVDENA G CA+LVFAPID SF+DDAP++PSGFR+IPLD+  D PS  RTLD
Sbjct: 1   MYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDPPSGTRTLD 60

Query: 621 LASALEVGPTGN-KASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIAS 679
           LAS LEVG  G  + S D+S+ C +T+SV+TIAFQF++E HL+E+VA+MARQYVR ++AS
Sbjct: 61  LASTLEVGSGGTTRTSSDASSTC-NTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVAS 119

Query: 680 VQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           VQRVA A++PSR G    ++  PGSPEAHTLARWI +SYR
Sbjct: 120 VQRVARAIAPSRLGGQLEMKQTPGSPEAHTLARWIGRSYR 159


>gi|227809756|gb|ACP41070.1| unknown [Drosanthemum speciosum]
          Length = 125

 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 109/130 (83%), Positives = 112/130 (86%), Gaps = 5/130 (3%)

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKV   NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN +FR Q
Sbjct: 1   QIKVVVSNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATG 189
           T     LA+ DTSCESVVTSGQHHLTP    QHPPRDASPAGLLSIAEETL EFLSKATG
Sbjct: 61  TSKTG-LASKDTSCESVVTSGQHHLTP----QHPPRDASPAGLLSIAEETLAEFLSKATG 115

Query: 190 TAVEWVQMPG 199
           TAV+WVQM G
Sbjct: 116 TAVDWVQMLG 125


>gi|414871784|tpg|DAA50341.1| TPA: hypothetical protein ZEAMMB73_581465 [Zea mays]
          Length = 298

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 103/155 (66%), Positives = 128/155 (82%), Gaps = 2/155 (1%)

Query: 566 LCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASAL 625
            CSGVDENA G CA+LVFAPID SF+DDAP++PSGFR+IPLD+  D PS  RTLDLAS L
Sbjct: 12  FCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDPPSGTRTLDLASTL 71

Query: 626 EVGPTGN-KASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVA 684
           EVG  G  +AS D+S+ C +T+SV+TIAFQF++E HL+E+VA+MARQYVR ++ASVQRVA
Sbjct: 72  EVGSGGTTRASSDASSTC-NTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVA 130

Query: 685 LALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           +A++PSR G    ++  PGSPEAHTLARWI +SYR
Sbjct: 131 MAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYR 165


>gi|222625450|gb|EEE59582.1| hypothetical protein OsJ_11886 [Oryza sativa Japonica Group]
          Length = 152

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 105/129 (81%), Positives = 110/129 (85%), Gaps = 2/129 (1%)

Query: 7   GGSRDSRDS--GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILS 64
           G  R  R S  GG    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILS
Sbjct: 11  GVGRQDRSSPGGGGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILS 70

Query: 65  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT 124
           NIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS+LVYEN 
Sbjct: 71  NIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENG 130

Query: 125 FFRQQTQNA 133
           + RQQ  N 
Sbjct: 131 YMRQQLHNV 139


>gi|413917202|gb|AFW57134.1| hypothetical protein ZEAMMB73_352358 [Zea mays]
          Length = 806

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/215 (52%), Positives = 136/215 (63%), Gaps = 56/215 (26%)

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           R REKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVS+LV +N               
Sbjct: 110 RIREKQRKESSRLQIVNRKLSAMNKLLMEENDRLQKQVSRLVLDN--------------- 154

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
                                           GLL+I EETL EF+SKATGTAV WVQM 
Sbjct: 155 --------------------------------GLLAIVEETLAEFMSKATGTAVNWVQMV 182

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GM+PGPDS+GIVA+SH C+GVAARACGL       VAEI KDR SW+RDCR V+V++V+P
Sbjct: 183 GMEPGPDSVGIVAVSHNCSGVAARACGL-------VAEIHKDRASWFRDCRHVDVLHVIP 235

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVL 293
           TG+ GTIEL+Y+Q +   T+   ++ +  RY   L
Sbjct: 236 TGNGGTIELIYIQGFGFVTMPCVKEAY--RYIKYL 268


>gi|397135782|gb|AFO11388.1| truncated revoluta, partial [Brassica rapa]
          Length = 144

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 103/146 (70%), Positives = 115/146 (78%), Gaps = 11/146 (7%)

Query: 140 DTSCESVVTSGQHHLTPQQQHQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           D SC+SVVT+ QH L          RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMP
Sbjct: 3   DPSCDSVVTTPQHSL----------RDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMP 52

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDS+GI AIS  C+GVAARACGLV L+P ++AEILKDRPSW+RDCRS+EV  + P
Sbjct: 53  GMKPGPDSVGIFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFP 112

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDF 284
            G  GTIEL+YMQ YAPTTLA    F
Sbjct: 113 AGDGGTIELVYMQTYAPTTLASCPRF 138


>gi|227809748|gb|ACP41066.1| unknown [Faucaria felina]
          Length = 112

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 101/117 (86%), Positives = 103/117 (88%), Gaps = 5/117 (4%)

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN +FR Q
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSK 186
           T     LA+ DTSCESVVTSGQHHLTP    QHPPRDASPAGLLSIAEETL EFLSK
Sbjct: 61  TSKTG-LASKDTSCESVVTSGQHHLTP----QHPPRDASPAGLLSIAEETLAEFLSK 112


>gi|148283423|gb|ABQ57292.1| hox32, partial [Oryza sativa Indica Group]
          Length = 148

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 90/143 (62%), Positives = 115/143 (80%), Gaps = 1/143 (0%)

Query: 395 GWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLS 454
           G GR+PA LR  SQRLSRGFN+A+NGF D+GWS++ SDG +DVT+  NSSP+K++G  ++
Sbjct: 6   GGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAFNSSPNKLVGSHVN 65

Query: 455 YVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSL 514
               F ++   +LCAKASMLLQ+VPPA+L+RFLREHRSEWAD  +DAYSAAA++A P ++
Sbjct: 66  SSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAAALRASPYAV 125

Query: 515 PVPRAGNF-GGQVILPLAHTIEH 536
           P  RAG F G QVILPLAHT+EH
Sbjct: 126 PGLRAGGFMGSQVILPLAHTLEH 148


>gi|91940097|gb|ABE66391.1| homeobox leucine-zipper protein [Striga asiatica]
          Length = 150

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/154 (61%), Positives = 120/154 (77%), Gaps = 7/154 (4%)

Query: 356 PEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFN 415
           PEVLRPLYESS ++AQ+TT+AALR++RQI+QE S   V G GR+PA LR  SQRLSRGFN
Sbjct: 1   PEVLRPLYESSKVLAQRTTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFN 60

Query: 416 EALNGFTDEGWSMLE-SDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASML 474
           +A+NGF D+GWS+L   DG DDV V V+S+ +      ++  +   SM   VLCAKASML
Sbjct: 61  DAINGFNDDGWSLLNCDDGGDDVIVAVSSAKN------VTGASNNISMIGGVLCAKASML 114

Query: 475 LQDVPPAILLRFLREHRSEWADSSIDAYSAAAVK 508
           LQ+VP A+L+RFLREHRSEWAD ++DAYSAA++K
Sbjct: 115 LQNVPAAVLVRFLREHRSEWADFNVDAYSAASLK 148


>gi|397135788|gb|AFO11391.1| truncated revoluta, partial [Brassica juncea]
          Length = 141

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/149 (65%), Positives = 111/149 (74%), Gaps = 17/149 (11%)

Query: 140 DTSCESVVTSGQHHLTPQQQHQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           D SC+S + +     TPQ    H  RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMP
Sbjct: 3   DPSCDSPLKT-----TPQ----HSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMP 53

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           GMKPGPDS+GI AIS  C+GVAARACGLV L+P ++AEILKDRPSW+RDCRS+EV  +  
Sbjct: 54  GMKPGPDSVGIFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFL 113

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLL 287
            G  GTIEL+YMQ Y       A+  WLL
Sbjct: 114 AGHGGTIELVYMQTY-------AQRLWLL 135


>gi|297725273|ref|NP_001175000.1| Os06g0720500 [Oryza sativa Japonica Group]
 gi|255677403|dbj|BAH93728.1| Os06g0720500 [Oryza sativa Japonica Group]
          Length = 138

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 84/108 (77%), Positives = 95/108 (87%)

Query: 270 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSG 329
           +QLYAPTTLAPA DFWLLRYTS+L DGSLVVCERSL++ Q GPSMP    F+R EMLPSG
Sbjct: 30  LQLYAPTTLAPAHDFWLLRYTSILGDGSLVVCERSLSSKQGGPSMPLVQPFIRDEMLPSG 89

Query: 330 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
           +LIRP +GGGS+IHIVDHMDLEPWSVPEV+RPLYESS L+AQK +MA 
Sbjct: 90  FLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMAV 137


>gi|212721696|ref|NP_001131313.1| uncharacterized protein LOC100192627 [Zea mays]
 gi|194691156|gb|ACF79662.1| unknown [Zea mays]
          Length = 284

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 89/151 (58%), Positives = 114/151 (75%), Gaps = 1/151 (0%)

Query: 570 VDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGP 629
           +DE ++G+C +LVFAPID  F DDAP++ SGFR+IPLD   D P   RTLDLAS+LEVG 
Sbjct: 1   MDEKSMGSCFQLVFAPIDELFPDDAPLVSSGFRVIPLDIKTDGPPSGRTLDLASSLEVGA 60

Query: 630 TGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSP 689
           T  + +G+ S    + +SV+TIAFQF +E HLQ+ VA+MARQYVR I+++VQRV++A+SP
Sbjct: 61  TTQQVAGNGSQDVCNLRSVLTIAFQFPYETHLQDTVAAMARQYVRSIVSAVQRVSMAISP 120

Query: 690 SRFGSN-AGLRPPPGSPEAHTLARWICQSYR 719
           S  G N AG +   GSPEA TL RWICQSYR
Sbjct: 121 SHSGLNTAGQKLISGSPEAATLVRWICQSYR 151


>gi|227809762|gb|ACP41073.1| unknown [Carruanthus ringens]
 gi|227809770|gb|ACP41077.1| unknown [Cephalophyllum pillansii]
 gi|227809776|gb|ACP41080.1| unknown [Drosanthemum speciosum]
          Length = 120

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/130 (73%), Positives = 102/130 (78%), Gaps = 10/130 (7%)

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV EN F RQQ
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATG 189
            Q  A    TD SCESVVT+ Q+ L             +PAGLLSIAEETL EFLSKATG
Sbjct: 61  LQ-PALPPNTDGSCESVVTTSQYSLKD---------TNNPAGLLSIAEETLAEFLSKATG 110

Query: 190 TAVEWVQMPG 199
           TAV+WVQMPG
Sbjct: 111 TAVDWVQMPG 120


>gi|110349548|gb|ABG73249.1| class III HD-Zip protein HDZ35 [Pinus taeda]
          Length = 399

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/270 (40%), Positives = 152/270 (56%), Gaps = 13/270 (4%)

Query: 457 NGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPV 516
           N   S    +L  KAS+LLQ+V P +L RFLREHR+EW D  ++       KA  C   +
Sbjct: 7   NSLCSTDMGILSVKASLLLQEVSPTMLARFLREHRTEWMDYELNF----NYKASYCQ-NM 61

Query: 517 PRAGNFGG--QVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENA 574
             AG  G   QV LPL  + + +E LEVIKLE+     E  I  ++ F+LQLC+G+    
Sbjct: 62  QTAGLHGSFRQVSLPLTQSADQDESLEVIKLESTG--EETNIKSNETFILQLCNGISGTT 119

Query: 575 VGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNK- 633
               A+LVFAP+DAS SD+ P++PSGFRII +++ KD    +RTLDL S LE G  G + 
Sbjct: 120 ASGWAQLVFAPVDASLSDELPLLPSGFRIITINNYKDQCCLSRTLDLTSHLEGGSEGCRF 179

Query: 634 -ASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRF 692
             +GD    C S  SV+T+AFQF +E  +++ V   A  Y + ++  +++ A+ + P+  
Sbjct: 180 HTAGDPDVLCYS--SVLTVAFQFKYEAQIRDLVTVKAHHYAQRVLEFIRKAAVLIMPACE 237

Query: 693 GSNAGLRPPPGSPEAHTLARWICQSYRCVF 722
            S  G  P   S E+  L   I Q YR  F
Sbjct: 238 TSQKGRNPSVCSLESKILVYHIVQKYRNFF 267


>gi|227809764|gb|ACP41074.1| unknown [Faucaria felina]
 gi|227809766|gb|ACP41075.1| unknown [Mossia intervallaris]
 gi|227809774|gb|ACP41079.1| unknown [Polymita steenbokensis]
          Length = 120

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/130 (73%), Positives = 101/130 (77%), Gaps = 10/130 (7%)

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV EN F RQQ
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATG 189
            Q  A    TD SCESVVT+ Q+ L             +PAGLLSIAEETL EFLSKATG
Sbjct: 61  LQ-PALPPNTDGSCESVVTTSQYSLKD---------TNNPAGLLSIAEETLAEFLSKATG 110

Query: 190 TAVEWVQMPG 199
           TAV+WVQM G
Sbjct: 111 TAVDWVQMLG 120


>gi|227809768|gb|ACP41076.1| unknown [Delosperma echinatum]
          Length = 120

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/130 (73%), Positives = 101/130 (77%), Gaps = 10/130 (7%)

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKE+SRLQ V RKL+AMNKLLMEENDRLQKQVSQLV EN F RQQ
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVIRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATG 189
            Q  A    TD SCESVVT+ Q+ L             +PAGLLSIAEETL EFLSKATG
Sbjct: 61  LQ-PALPPNTDGSCESVVTTSQYSLKD---------TNNPAGLLSIAEETLAEFLSKATG 110

Query: 190 TAVEWVQMPG 199
           TAV+WVQMPG
Sbjct: 111 TAVDWVQMPG 120


>gi|227809772|gb|ACP41078.1| unknown [Scopelogena bruynsii]
          Length = 120

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/130 (72%), Positives = 100/130 (76%), Gaps = 10/130 (7%)

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV EN F RQQ
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATG 189
            Q  A    TD SCESVVT+  + L             +PAGLLSIAEETL EFLSKATG
Sbjct: 61  LQ-PALPPNTDGSCESVVTTSHYSLKDTN---------NPAGLLSIAEETLAEFLSKATG 110

Query: 190 TAVEWVQMPG 199
           TAV+WVQM G
Sbjct: 111 TAVDWVQMLG 120


>gi|227809760|gb|ACP41072.1| unknown [Pleiospilos simulans]
          Length = 120

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/130 (72%), Positives = 100/130 (76%), Gaps = 10/130 (7%)

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV EN F RQQ
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATG 189
            Q  A    T  SCESVVT+ Q+ L             +PAGLLSIAEETL EFLSKATG
Sbjct: 61  LQ-PALPPNTHGSCESVVTTSQYSLKD---------TNNPAGLLSIAEETLAEFLSKATG 110

Query: 190 TAVEWVQMPG 199
           TAV+WVQM G
Sbjct: 111 TAVDWVQMLG 120


>gi|45593094|gb|AAS68136.1| homeodomain leucine zipper protein 32 [Oryza sativa Japonica Group]
          Length = 132

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 81/127 (63%), Positives = 100/127 (78%), Gaps = 1/127 (0%)

Query: 507 VKAGPCSLPVPRAGNF-GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQ 565
           ++A P ++P  RAG F G QVILPLAHT+EHEEFLEVI+LE  +   +++++  D++LLQ
Sbjct: 1   LRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQ 60

Query: 566 LCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASAL 625
           LCSGVDENA G CA+LVFAPID SF+DDAP++PSGFR+IPLD   D PS  RTLDLAS L
Sbjct: 61  LCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDGKTDAPSATRTLDLASTL 120

Query: 626 EVGPTGN 632
           EVG  G 
Sbjct: 121 EVGSGGT 127


>gi|148283421|gb|ABQ57291.1| hox29, partial [Oryza sativa Indica Group]
          Length = 102

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 78/102 (76%), Positives = 89/102 (87%)

Query: 238 LKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGS 297
           LKDRP W RDCRS++VVNVLP G++GTIELLYMQLYAPTTLA ARDFWLLRYTS+L+DGS
Sbjct: 1   LKDRPLWLRDCRSMDVVNVLPAGANGTIELLYMQLYAPTTLALARDFWLLRYTSILDDGS 60

Query: 298 LVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGG 339
           LVVCERSL++ Q GPSMP    F+R EMLPSG+LIRP + GG
Sbjct: 61  LVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDVGG 102


>gi|148729437|gb|ABR09121.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 85/151 (56%), Positives = 115/151 (76%), Gaps = 6/151 (3%)

Query: 523 GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELV 582
           G Q+I+PL HTIEHEE LEV++LE  +  +ED  M  D+ LLQ+C+G+DENAVG C+EL+
Sbjct: 7   GSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSELI 66

Query: 583 FAPIDASFSDDAPIIPSGFRIIPLDSG----KDTPSPN-RTLDLASALEVGPTGNKASGD 637
           FAPI+  F DDAP++PSGFR+IP+D+     +D  + N RTLDL S+LEVGP+   ASG+
Sbjct: 67  FAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSPENASGN 126

Query: 638 SSTQCGSTKSVITIAFQFAFEMHLQENVASM 668
           +S+   S++ ++TIAFQF FE +LQENVA M
Sbjct: 127 TSSS-SSSRCILTIAFQFPFENNLQENVAGM 156


>gi|148729435|gb|ABR09120.1| REV [Arabidopsis thaliana]
 gi|148729441|gb|ABR09123.1| REV [Arabidopsis thaliana]
 gi|148729443|gb|ABR09124.1| REV [Arabidopsis thaliana]
 gi|148729447|gb|ABR09126.1| REV [Arabidopsis thaliana]
 gi|148729449|gb|ABR09127.1| REV [Arabidopsis thaliana]
 gi|148729451|gb|ABR09128.1| REV [Arabidopsis thaliana]
 gi|148729453|gb|ABR09129.1| REV [Arabidopsis thaliana]
 gi|148729459|gb|ABR09132.1| REV [Arabidopsis thaliana]
 gi|148729461|gb|ABR09133.1| REV [Arabidopsis thaliana]
 gi|148729463|gb|ABR09134.1| REV [Arabidopsis thaliana]
 gi|148729475|gb|ABR09140.1| REV [Arabidopsis thaliana]
 gi|148729479|gb|ABR09142.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/151 (56%), Positives = 115/151 (76%), Gaps = 6/151 (3%)

Query: 523 GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELV 582
           G Q+I+PL HTIEHEE LEV++LE  +  +ED  M  D+ LLQ+C+G+DENAVG C+EL+
Sbjct: 7   GSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSELI 66

Query: 583 FAPIDASFSDDAPIIPSGFRIIPLDSG----KDTPSPN-RTLDLASALEVGPTGNKASGD 637
           FAPI+  F DDAP++PSGFR+IP+D+     +D  + N RTLDL S+LEVGP+   ASG+
Sbjct: 67  FAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSPENASGN 126

Query: 638 SSTQCGSTKSVITIAFQFAFEMHLQENVASM 668
           SS+   S++ ++TIAFQF FE +LQENVA M
Sbjct: 127 SSSS-SSSRCILTIAFQFPFENNLQENVAGM 156


>gi|227809758|gb|ACP41071.1| unknown [Mesembryanthemum aitonis]
          Length = 118

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/131 (70%), Positives = 97/131 (74%), Gaps = 14/131 (10%)

Query: 70  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ 129
           QIKVWFQNRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV EN F RQQ
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVSENGFMRQQ 60

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDA-SPAGLLSIAEETLTEFLSKAT 188
                     D SCES  T      TPQ       RDA +PAGLLSIAEE L EFLSKAT
Sbjct: 61  LHTPPP-PNADGSCESAAT------TPQ------LRDANNPAGLLSIAEEALAEFLSKAT 107

Query: 189 GTAVEWVQMPG 199
           GTAV+WVQM G
Sbjct: 108 GTAVDWVQMLG 118


>gi|170677980|gb|ACB31050.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677982|gb|ACB31051.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677984|gb|ACB31052.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677986|gb|ACB31053.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677988|gb|ACB31054.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677990|gb|ACB31055.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677992|gb|ACB31056.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677994|gb|ACB31057.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677996|gb|ACB31058.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677998|gb|ACB31059.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678000|gb|ACB31060.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678002|gb|ACB31061.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678004|gb|ACB31062.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678006|gb|ACB31063.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678008|gb|ACB31064.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678010|gb|ACB31065.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678012|gb|ACB31066.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678014|gb|ACB31067.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678016|gb|ACB31068.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678018|gb|ACB31069.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678020|gb|ACB31070.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678022|gb|ACB31071.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678024|gb|ACB31072.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678026|gb|ACB31073.1| ATHB-8, partial [Arabidopsis thaliana]
          Length = 85

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 77/82 (93%), Positives = 81/82 (98%)

Query: 161 QHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVA 220
           QH PRDASPAGLLSIA+ETLTEF+SKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTG+A
Sbjct: 3   QHQPRDASPAGLLSIADETLTEFISKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGIA 62

Query: 221 ARACGLVGLDPTRVAEILKDRP 242
           ARACGLVGLDPTRVAEILKD+P
Sbjct: 63  ARACGLVGLDPTRVAEILKDKP 84


>gi|148729445|gb|ABR09125.1| REV [Arabidopsis thaliana]
 gi|148729455|gb|ABR09130.1| REV [Arabidopsis thaliana]
 gi|148729457|gb|ABR09131.1| REV [Arabidopsis thaliana]
 gi|148729465|gb|ABR09135.1| REV [Arabidopsis thaliana]
 gi|148729467|gb|ABR09136.1| REV [Arabidopsis thaliana]
 gi|148729469|gb|ABR09137.1| REV [Arabidopsis thaliana]
 gi|148729471|gb|ABR09138.1| REV [Arabidopsis thaliana]
 gi|148729473|gb|ABR09139.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 85/151 (56%), Positives = 114/151 (75%), Gaps = 6/151 (3%)

Query: 523 GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELV 582
           G Q+I+PL HTIEHEE LEV++LE  +  +ED  M  D+ LLQ+C+G+DENAVG C+EL+
Sbjct: 7   GSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSELI 66

Query: 583 FAPIDASFSDDAPIIPSGFRIIPLDSG----KDTPSPN-RTLDLASALEVGPTGNKASGD 637
           FAPI+  F DDAP++PSGFR+IP+D+     +D  + N RTLDL S+LEVGP+   ASG+
Sbjct: 67  FAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSPENASGN 126

Query: 638 SSTQCGSTKSVITIAFQFAFEMHLQENVASM 668
           S +   S++ ++TIAFQF FE +LQENVA M
Sbjct: 127 SFSS-SSSRCILTIAFQFPFENNLQENVAGM 156


>gi|148729439|gb|ABR09122.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 86/151 (56%), Positives = 115/151 (76%), Gaps = 6/151 (3%)

Query: 523 GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELV 582
           G Q+I+PL HTIEHEE LEV++LE  +  +ED  M  D+ LLQ+C+G+DENAVG C+EL+
Sbjct: 7   GSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSELI 66

Query: 583 FAPIDASFSDDAPIIPSGFRIIPLDSG----KDTPSPN-RTLDLASALEVGPTGNKASGD 637
           FAPI+  F DDAP++PSGFR+IP+D+     +D  + N RTLDL S+LEVGP+   ASG+
Sbjct: 67  FAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSPENASGN 126

Query: 638 SSTQCGSTKSVITIAFQFAFEMHLQENVASM 668
           SS+   S++ ++TIAFQF FE +LQENVA M
Sbjct: 127 SSSI-SSSRCILTIAFQFPFENNLQENVAGM 156


>gi|148729477|gb|ABR09141.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 85/151 (56%), Positives = 113/151 (74%), Gaps = 6/151 (3%)

Query: 523 GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELV 582
           G Q+I+PL HTIEHEE LEV++LE  +  +ED  M  D+ LLQ+C+G+DENAVG C+EL+
Sbjct: 7   GSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSELI 66

Query: 583 FAPIDASFSDDAPIIPSGFRIIPLDSG----KDTPSPN-RTLDLASALEVGPTGNKASGD 637
           FAPI+  F DDAP++PSGFR+IP+D+     +D  + N RTLDL S+LEVGP+   ASG+
Sbjct: 67  FAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSPENASGN 126

Query: 638 SSTQCGSTKSVITIAFQFAFEMHLQENVASM 668
           S +   S + ++TIAFQF FE +LQENVA M
Sbjct: 127 SFSS-SSLRCILTIAFQFPFENNLQENVAGM 156


>gi|3868829|dbj|BAA34235.1| CRHB1 [Ceratopteris richardii]
          Length = 157

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/121 (63%), Positives = 92/121 (76%), Gaps = 3/121 (2%)

Query: 12  SRDSGG---QKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           SR  GG   Q      GKYVRYT EQV+ALE+LY ECPKP+ ++RQQLIREC IL N++ 
Sbjct: 3   SRGDGGEAEQATDASGGKYVRYTSEQVQALEKLYCECPKPTLLQRQQLIRECSILRNVDH 62

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQ 128
           KQIKVWFQNRRCREKQRKE  RLQ++N KLT +N +LMEEN +LQ+ V+QLV  N   R+
Sbjct: 63  KQIKVWFQNRRCREKQRKEWCRLQSLNGKLTPINTMLMEENVQLQQHVAQLVTINHALRR 122

Query: 129 Q 129
           Q
Sbjct: 123 Q 123


>gi|170678028|gb|ACB31074.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678034|gb|ACB31077.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678036|gb|ACB31078.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678038|gb|ACB31079.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678042|gb|ACB31081.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678046|gb|ACB31083.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678048|gb|ACB31084.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678050|gb|ACB31085.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678052|gb|ACB31086.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678060|gb|ACB31090.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678062|gb|ACB31091.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678066|gb|ACB31093.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678068|gb|ACB31094.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678070|gb|ACB31095.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678072|gb|ACB31096.1| ATHB-15, partial [Arabidopsis thaliana]
          Length = 81

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/85 (85%), Positives = 76/85 (89%), Gaps = 4/85 (4%)

Query: 151 QHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIV 210
           QH L      Q+P RDASPAGLLSIAEETL EFLSKATGTAVEWVQMPGMKPGPDSIGI+
Sbjct: 1   QHQLA----SQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGII 56

Query: 211 AISHGCTGVAARACGLVGLDPTRVA 235
           AISHGCTGVAARACGLVGL+PTRVA
Sbjct: 57  AISHGCTGVAARACGLVGLEPTRVA 81


>gi|413917976|gb|AFW57908.1| hypothetical protein ZEAMMB73_425798 [Zea mays]
          Length = 672

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/110 (61%), Positives = 88/110 (80%), Gaps = 2/110 (1%)

Query: 184 LSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPS 243
           +SKATGTAV WVQM GM+PGPDS+GIVA+SH C+ VAARACGLV L+PT+VAEI KDR S
Sbjct: 1   MSKATGTAVNWVQMVGMEPGPDSVGIVAVSHNCSVVAARACGLVSLEPTKVAEIHKDRAS 60

Query: 244 WYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVL 293
           W+RDCR V+V++V+PTG+ GTIEL+Y+Q +   T+   ++ +  RY   L
Sbjct: 61  WFRDCRHVDVLHVIPTGNGGTIELIYIQGFGFVTMPCVKEAY--RYIKYL 108


>gi|170678030|gb|ACB31075.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678032|gb|ACB31076.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678040|gb|ACB31080.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678044|gb|ACB31082.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678054|gb|ACB31087.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678056|gb|ACB31088.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678058|gb|ACB31089.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678064|gb|ACB31092.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678074|gb|ACB31097.1| ATHB-15, partial [Arabidopsis thaliana]
          Length = 81

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/85 (84%), Positives = 76/85 (89%), Gaps = 4/85 (4%)

Query: 151 QHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIV 210
           QH L      Q+P RDASPAGLLSIAEETL EFLSKATGTAVEW+QMPGMKPGPDSIGI+
Sbjct: 1   QHQLA----SQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWIQMPGMKPGPDSIGII 56

Query: 211 AISHGCTGVAARACGLVGLDPTRVA 235
           AISHGCTGVAARACGLVGL+PTRVA
Sbjct: 57  AISHGCTGVAARACGLVGLEPTRVA 81


>gi|170678722|gb|ACB31421.1| PHB, partial [Arabidopsis thaliana]
 gi|170678724|gb|ACB31422.1| PHB, partial [Arabidopsis thaliana]
 gi|170678726|gb|ACB31423.1| PHB, partial [Arabidopsis thaliana]
 gi|170678728|gb|ACB31424.1| PHB, partial [Arabidopsis thaliana]
 gi|170678730|gb|ACB31425.1| PHB, partial [Arabidopsis thaliana]
 gi|170678732|gb|ACB31426.1| PHB, partial [Arabidopsis thaliana]
 gi|170678734|gb|ACB31427.1| PHB, partial [Arabidopsis thaliana]
 gi|170678736|gb|ACB31428.1| PHB, partial [Arabidopsis thaliana]
 gi|170678738|gb|ACB31429.1| PHB, partial [Arabidopsis thaliana]
 gi|170678740|gb|ACB31430.1| PHB, partial [Arabidopsis thaliana]
 gi|170678742|gb|ACB31431.1| PHB, partial [Arabidopsis thaliana]
 gi|170678744|gb|ACB31432.1| PHB, partial [Arabidopsis thaliana]
 gi|170678746|gb|ACB31433.1| PHB, partial [Arabidopsis thaliana]
 gi|170678748|gb|ACB31434.1| PHB, partial [Arabidopsis thaliana]
 gi|170678750|gb|ACB31435.1| PHB, partial [Arabidopsis thaliana]
 gi|170678752|gb|ACB31436.1| PHB, partial [Arabidopsis thaliana]
 gi|170678754|gb|ACB31437.1| PHB, partial [Arabidopsis thaliana]
 gi|170678756|gb|ACB31438.1| PHB, partial [Arabidopsis thaliana]
 gi|170678758|gb|ACB31439.1| PHB, partial [Arabidopsis thaliana]
 gi|170678760|gb|ACB31440.1| PHB, partial [Arabidopsis thaliana]
 gi|170678762|gb|ACB31441.1| PHB, partial [Arabidopsis thaliana]
 gi|170678764|gb|ACB31442.1| PHB, partial [Arabidopsis thaliana]
 gi|170678766|gb|ACB31443.1| PHB, partial [Arabidopsis thaliana]
 gi|170678768|gb|ACB31444.1| PHB, partial [Arabidopsis thaliana]
          Length = 82

 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 68/82 (82%), Positives = 74/82 (90%)

Query: 168 SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLV 227
           +PAGLLSIAEE L EFLSKATGTAV+WVQM GMKPGPDSIGIVAIS  C+G+AARACGLV
Sbjct: 1   NPAGLLSIAEEALAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLV 60

Query: 228 GLDPTRVAEILKDRPSWYRDCR 249
            L+P +VAEILKDRPSW RDCR
Sbjct: 61  SLEPMKVAEILKDRPSWLRDCR 82


>gi|109729922|tpg|DAA05775.1| TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens]
          Length = 799

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 185/762 (24%), Positives = 306/762 (40%), Gaps = 182/762 (23%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP Q++ +E L+ ECP P   +RQQL R+      +EP+Q+K WFQNRR + K  
Sbjct: 115 RYHRHTPRQIQEMEMLFKECPHPDDKQRQQLSRDL----GLEPRQVKFWFQNRRTQMKAQ 170

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 114
            +R E S L++ N KL + N ++ E                            EN RL++
Sbjct: 171 TERAENSMLRSENEKLRSENLIMREALKNPQCPHCGGPATVGEMTFDEQQLRIENVRLKE 230

Query: 115 QVSQL-VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHP---------- 163
           ++ ++      +  +     A LA   +S +  V  G           HP          
Sbjct: 231 ELDRVSALAAKYLGRPITPMAPLALPSSSLDLQVGGGSSF-----GGMHPAPGNLDVVAG 285

Query: 164 PRDAS----PAGL--------LSIAEETLTEFLSKATGTAVEWVQMPG-----------M 200
           P  A     P GL        + +A   + E +  A      WV M             M
Sbjct: 286 PSVADVATRPGGLTEAEKPMVVELAVTAMEELVRMAQTEEPLWVNMGEVGKEQLNYEEYM 345

Query: 201 KPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVE----VVNV 256
           +  P  IG+     G    A R   LV ++   + E L D   W      +      V+V
Sbjct: 346 RQFPRGIGMCP--PGLKTEATRETALVMMNGVNLVETLMDATQWMDMFPCIVSRALTVDV 403

Query: 257 LPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGP 312
           L TG +G     ++L+Y +L   + L P R+ + LRY     +G   V + S+++ ++ P
Sbjct: 404 LATGVTGNRNGALQLMYAELQVLSPLVPTREIYFLRYCKQHAEGVWAVVDVSVDSLRDNP 463

Query: 313 SMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQK 372
                P  +R    PSG LI+    G + +  V+HM+ +  +V  + R L  +      +
Sbjct: 464 ----PPSLMRCRRRPSGVLIQDTPNGYAKVTCVEHMEYDDRAVHRMYRDLVNTGMAFGAQ 519

Query: 373 TTMAAL-----RHLRQISQEVSQPSVTGW----GRRPAALRALSQRLSRGFNEALNGFTD 423
             +A L     R    ++  ++   + G     GRR  ++  L+QR++  F   ++  T 
Sbjct: 520 RWLATLQRQCERLASLLASNIASRDLGGVPSASGRR--SMLKLAQRMTNNFCAGVSASTV 577

Query: 424 EGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
             W+ L   G DDV V    S   P +  G+              VL A  SM L  V P
Sbjct: 578 HTWTTLSGSGDDDVRVMTRKSVDNPGEPHGI--------------VLSAATSMWL-PVSP 622

Query: 481 AILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE 538
           A + +FLR+   RSEW     D  S                    G ++  +AH  + ++
Sbjct: 623 ARVFQFLRDERLRSEW-----DILS-------------------NGGMVTEMAHIAKGQD 658

Query: 539 ---FLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDA------- 588
               + ++++  M   + +M++     L + C+ V  + V      ++AP+D        
Sbjct: 659 PGNSVSLLRVNAMNSSQSNMLI-----LQESCTDVSGSLV------IYAPVDIPAMNLVL 707

Query: 589 SFSDDA--PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTK 646
              D A   ++PSGF I+P     D P  +R          G  GN+  G  +     T 
Sbjct: 708 QGGDPAYVALLPSGFAILP-----DGPGGDR----------GALGNEQGGQLTEIGRGTG 752

Query: 647 SVITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
           S++T+AFQ          ++  +   V  +I+ +VQR+  AL
Sbjct: 753 SLLTVAFQILVSSIPSARLSLESVATVNNLISCTVQRIRSAL 794


>gi|414871785|tpg|DAA50342.1| TPA: hypothetical protein ZEAMMB73_581465 [Zea mays]
          Length = 251

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 90/111 (81%), Gaps = 2/111 (1%)

Query: 610 KDTPSPNRTLDLASALEVGPTGN-KASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASM 668
           +D PS  RTLDLAS LEVG  G  +AS D+S+ C +T+SV+TIAFQF++E HL+E+VA+M
Sbjct: 9   QDPPSGTRTLDLASTLEVGSGGTTRASSDASSTC-NTRSVLTIAFQFSYENHLRESVAAM 67

Query: 669 ARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           ARQYVR ++ASVQRVA+A++PSR G    ++  PGSPEAHTLARWI +SYR
Sbjct: 68  ARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYR 118


>gi|170678818|gb|ACB31469.1| REV, partial [Arabidopsis thaliana]
 gi|170678820|gb|ACB31470.1| REV, partial [Arabidopsis thaliana]
 gi|170678822|gb|ACB31471.1| REV, partial [Arabidopsis thaliana]
 gi|170678824|gb|ACB31472.1| REV, partial [Arabidopsis thaliana]
 gi|170678826|gb|ACB31473.1| REV, partial [Arabidopsis thaliana]
 gi|170678828|gb|ACB31474.1| REV, partial [Arabidopsis thaliana]
 gi|170678830|gb|ACB31475.1| REV, partial [Arabidopsis thaliana]
 gi|170678832|gb|ACB31476.1| REV, partial [Arabidopsis thaliana]
 gi|170678834|gb|ACB31477.1| REV, partial [Arabidopsis thaliana]
 gi|170678836|gb|ACB31478.1| REV, partial [Arabidopsis thaliana]
 gi|170678838|gb|ACB31479.1| REV, partial [Arabidopsis thaliana]
 gi|170678840|gb|ACB31480.1| REV, partial [Arabidopsis thaliana]
 gi|170678842|gb|ACB31481.1| REV, partial [Arabidopsis thaliana]
 gi|170678844|gb|ACB31482.1| REV, partial [Arabidopsis thaliana]
 gi|170678846|gb|ACB31483.1| REV, partial [Arabidopsis thaliana]
 gi|170678848|gb|ACB31484.1| REV, partial [Arabidopsis thaliana]
 gi|170678850|gb|ACB31485.1| REV, partial [Arabidopsis thaliana]
 gi|170678852|gb|ACB31486.1| REV, partial [Arabidopsis thaliana]
 gi|170678854|gb|ACB31487.1| REV, partial [Arabidopsis thaliana]
 gi|170678856|gb|ACB31488.1| REV, partial [Arabidopsis thaliana]
 gi|170678858|gb|ACB31489.1| REV, partial [Arabidopsis thaliana]
 gi|170678860|gb|ACB31490.1| REV, partial [Arabidopsis thaliana]
 gi|170678862|gb|ACB31491.1| REV, partial [Arabidopsis thaliana]
 gi|170678864|gb|ACB31492.1| REV, partial [Arabidopsis thaliana]
          Length = 82

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/81 (83%), Positives = 73/81 (90%), Gaps = 1/81 (1%)

Query: 165 RDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARA 223
           RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPDS+GI AIS  C GVAARA
Sbjct: 2   RDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQRCNGVAARA 61

Query: 224 CGLVGLDPTRVAEILKDRPSW 244
           CGLV L+P ++AEILKDRPSW
Sbjct: 62  CGLVSLEPMKIAEILKDRPSW 82


>gi|109729926|tpg|DAA05777.1| TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens]
          Length = 799

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 181/756 (23%), Positives = 305/756 (40%), Gaps = 171/756 (22%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP Q++ +E L+ ECP P   +RQQL ++      +EP+Q+K WFQNRR + K  
Sbjct: 116 RYHRHTPRQIQEMEMLFKECPHPDDKQRQQLSKDL----GLEPRQVKFWFQNRRTQMKAQ 171

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 114
            +R E S L+A N K+ + N ++ E                            EN RL++
Sbjct: 172 TERAENSMLRAENEKVRSENLIMREALKNPQCPHCGGPATVGEMTFDEQQLRIENVRLKE 231

Query: 115 QVSQL-VYENTFFRQQTQNAATLATTDTSCESVVTSGQH----HLTPQQ-QHQHPPRDAS 168
           ++ ++      +  +     A LA   +S +  V  G      H TP        P  A 
Sbjct: 232 ELDRVSALAAKYLGRPITPMAPLALPSSSLDLQVGGGSSFGGMHPTPGNLDLVAGPSVAD 291

Query: 169 ----PAGL--------LSIAEETLTEFLSKATGTAVEWVQMPG----------MKPGPDS 206
               P GL        + +A   + E +  A      W+ M            M+  P  
Sbjct: 292 VATRPGGLTEAEKPMVVELAMMAMEELVRMAQAEEPLWLSMDSGKAQLNYDEYMRQFPRG 351

Query: 207 IGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWY-------RDCRSVEVVNVLPT 259
           IG+     G    A R   LV ++   + E L D   W            +V+V++   T
Sbjct: 352 IGMRP--SGLKPEATRETALVMMNGVNLVETLMDATQWMDMFPCMVSRALTVDVLSTGVT 409

Query: 260 GS-SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
           G+ +G ++L+Y +L   + L P R+ + LRY     +G   V + S+++ ++ P     P
Sbjct: 410 GNRNGALQLMYAELQVLSPLVPTREIYFLRYCKQHAEGVWAVVDVSVDSLRDNP----PP 465

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
             +R    PSG LI+    G + +  V+HM+ +  +V  + R L  +      +  +A L
Sbjct: 466 SLMRCRRRPSGVLIQDTPNGYAKVTCVEHMEYDDRAVHRMYRELVNTGMAFGAQRWLATL 525

Query: 379 -----RHLRQISQEVSQPSVTGW----GRRPAALRALSQRLSRGFNEALNGFTDEGWSML 429
                R    ++  ++   + G     GRR  ++  L+QR++  F   ++  T   W+ L
Sbjct: 526 QRQCERLASLLASNIASRDLGGVPSASGRR--SMLKLAQRMTNNFCAGVSASTVHTWTTL 583

Query: 430 ESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
              G DDV V    S   P +  G+              VL A  SM L  V PA + +F
Sbjct: 584 SGSGDDDVRVMTRKSVDNPGEPHGI--------------VLSAATSMWL-PVSPARVFQF 628

Query: 487 LREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE---FLE 541
           LR+   RSEW     D  S                    G ++  +AH  + ++    + 
Sbjct: 629 LRDERLRSEW-----DILS-------------------NGGIVTEMAHIAKGQDPGNSVS 664

Query: 542 VIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDA-------SFSDDA 594
           ++++  M   + +M++     L + C+ V  + V      ++AP+D           D A
Sbjct: 665 LLRVNAMNSNQSNMLI-----LQESCTDVSGSLV------IYAPVDIPAMNLVLQGGDPA 713

Query: 595 --PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIA 652
              ++PSGF I+P     D P   R          G  G       +     T S++T+A
Sbjct: 714 YVALLPSGFAILP-----DGPGGER----------GSLGVDQGSQLTESSRGTGSLLTVA 758

Query: 653 FQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
           FQ          ++  +   V  +I+ +VQR+  AL
Sbjct: 759 FQILVSSIPSARLSLESVATVNNLISCTVQRIKSAL 794


>gi|109729924|tpg|DAA05776.1| TPA_inf: class IV HD-Zip protein HDZ42 [Physcomitrella patens]
          Length = 794

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 183/760 (24%), Positives = 303/760 (39%), Gaps = 176/760 (23%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP Q++ +E L+ ECP P   +RQQL ++      +EP+Q+K WFQNRR   K  
Sbjct: 108 RYHRHTPRQIQEMEMLFKECPHPDDKQRQQLSKDL----GLEPRQVKFWFQNRRTHMKAQ 163

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 114
            +R E S L+A N KL + N ++ E                            EN RL++
Sbjct: 164 TERAENSMLRAENEKLRSENVIMREALKNPQCPHCGGPATVGEMSFDEQQLRLENVRLKE 223

Query: 115 QVSQL-VYENTFFRQQTQNAATLATTDTSCESVVTSGQHH---LTPQQQHQ----HPPRD 166
           ++ ++      +  +     A LA   +S +  V +G      L P Q         P  
Sbjct: 224 ELDRVSALAAKYLGRPIPPMAPLALPSSSLDLQVGAGGSSFGGLHPAQAGNLSMVQGPSV 283

Query: 167 AS----PAGL--------LSIAEETLTEFLSKATGTAVEWVQMPG-----------MKPG 203
           A     P GL        + +A   + E +  A      WV+ P            ++  
Sbjct: 284 ADVATRPGGLTEAEKPMVVELAMMAMEELVRMAQSEEPLWVRTPESGREQLNYDEYLRQS 343

Query: 204 PDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEV-----VNVLP 258
           P  IG+     G      R   +V ++   + E L D   W  D     V     V+VL 
Sbjct: 344 PRGIGMKP--PGLKTEVTRETAMVMMNGVNLVETLMDATQWI-DMYPCMVSRALTVDVLS 400

Query: 259 TG----SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSM 314
           TG     +G ++L+Y +L   + L P R+ + LRY     +G   V + S+ + ++ P  
Sbjct: 401 TGVAGNRNGALQLMYAELQVLSPLVPTREIYFLRYCKQHAEGVWAVVDVSVESLRDNP-- 458

Query: 315 PQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTT 374
              P  +R    PSG LI+    G + +  V+HM+ +  +V  + R L  S      +  
Sbjct: 459 --PPSLMRCRRRPSGILIQDTPNGYAKVTCVEHMEYDDRAVHRMYRELVNSGMAFGAQRW 516

Query: 375 MAAL-----RHLRQISQEVSQPSVTGW----GRRPAALRALSQRLSRGFNEALNGFTDEG 425
           MA L     R    ++  ++   + G     GRR  ++  L+QR++  F   ++  T   
Sbjct: 517 MATLQRQCERLASLLASNIASRDLGGVPSANGRR--SMLKLAQRMTNNFCAGVSASTVHT 574

Query: 426 WSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAI 482
           W+ L   G DDV V    S   P +  G+              VL A  SM L  V PA 
Sbjct: 575 WTTLSGSGDDDVRVMTRKSVDNPGEPHGI--------------VLSAATSMWL-PVSPAR 619

Query: 483 LLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE-- 538
           + +FLR+   RSEW     D  S                    G ++  +AH  + ++  
Sbjct: 620 VFQFLRDERLRSEW-----DILS-------------------NGGMVTEMAHIAKGQDPG 655

Query: 539 -FLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDA-------SF 590
             + ++K+  M     +M++     L + C+ V  + V      ++AP+D          
Sbjct: 656 NSVSLLKVNAMNTNNSNMLI-----LQESCTDVSGSLV------IYAPVDIPAMNLVLQG 704

Query: 591 SDDA--PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSV 648
            D A   ++PSGF I+P     D P     + +           +  G  +     + S+
Sbjct: 705 GDPAYVALLPSGFAILP-----DGPGGGDRVYMG----------EQPGQLTESGRGSGSL 749

Query: 649 ITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
           +T+AFQ          ++  +   V  +I+ +VQR+  AL
Sbjct: 750 LTVAFQILVSSVPSARLSLESVATVNNLISCTVQRIKAAL 789


>gi|19070143|gb|AAL83725.1|AF328842_1 homeodomain protein HB2 [Picea abies]
          Length = 708

 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 187/769 (24%), Positives = 306/769 (39%), Gaps = 165/769 (21%)

Query: 7   GGSRDSRDSGGQKMIMDN----GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           GGS D +D+       DN     +Y R+TP+Q++ LE L+ ECP P   +R  + +    
Sbjct: 12  GGSGDDQDAA------DNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLDISKRL-- 63

Query: 63  LSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMN----------------- 102
             N+E +Q+K+WFQNRR + K   +R E S L+  N KL + N                 
Sbjct: 64  --NLETRQVKLWFQNRRTQMKTQLERHENSILRQENEKLRSENLSIRDAMRNPICTNCGG 121

Query: 103 -----------KLLMEENDRLQKQVSQL-VYENTFFRQQTQNAATLATTDTSCESVVTSG 150
                      + L  EN RL+K++ +L      FF +   +  ++     S   +   G
Sbjct: 122 PAVLGEMSFEEQQLRIENARLKKELDRLCALAGKFFGRPVPSMPSVPLMPKSSLDLGVGG 181

Query: 151 QHHLTPQ--QQHQHPPRDASPAGLLSIAEETLTEFLSKAT------GTAVEWVQMPGMKP 202
                P       H P       ++ I    L E    +         A E + +P +  
Sbjct: 182 MPTSLPSGCADLMHGPAGGRTGNIIGIERSMLAELALASMDELFKMAQADETLWIPNLDA 241

Query: 203 GPDSIG-----------IVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR--DC- 248
           G +++            I     G    A R  G+V  +   + E L D   W     C 
Sbjct: 242 GKETLNYEEYMRQFPSTITPKLIGLATEATRETGMVITNSLNLVETLMDVDRWKEMFPCM 301

Query: 249 -RSVEVVNVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCER 303
                +V+V+ +G SGT    ++L+Y +L   + L PAR+ + LR+     +G   V + 
Sbjct: 302 ISRAAMVDVISSGMSGTRNGALQLMYAELQVLSPLVPAREVYFLRFCKQHAEGVWAVVDV 361

Query: 304 SLNNTQ-NGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPL 362
           S+++ + N P+      F++   LPSG LI+    G S +  V+H + +   V  + R L
Sbjct: 362 SVDSLRDNSPA-----GFMKCRRLPSGCLIQDMPNGYSKVTWVEHAEYDDRGVHRLYRSL 416

Query: 363 YESSTLIAQKTTMAAL-RHLRQISQEVSQPSVTGWGRRPAALRA---------LSQRLSR 412
             S      +  +A L R    ++  ++  +VT   R P A+R          L+QR++ 
Sbjct: 417 LNSGMAFGAQRWLATLQRQCECLAILMATANVT--ARDPTAIRTPNGRRSMLRLAQRMTD 474

Query: 413 GFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKAS 472
            F   ++  T   W+ L  +  DDV V    S               P     V+ + A+
Sbjct: 475 NFCAGVSASTVHTWNKLSGNIDDDVRVMTRKSVDD------------PGEPPGVVLSAAT 522

Query: 473 MLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCS--LPVPRAGNFGGQVIL 528
            +   V P  L  FLR+   RSEW     D  S      GP      +P+  + G  V L
Sbjct: 523 SVWLPVSPQRLFDFLRDERLRSEW-----DILS----NGGPMQEMAHIPKGQDPGNCVSL 573

Query: 529 PLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID- 587
             A  +   +                    S + L + C+    NA G+   +V+AP+D 
Sbjct: 574 LKASAMNSNQS------------------SSMLILQKTCT----NASGSL--VVYAPVDI 609

Query: 588 -----ASFSDDAP---IIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSS 639
                     D P   ++PSGF I+P +  K  P           L + P+GN   G +S
Sbjct: 610 PAMHVVMSGGDPPYVALLPSGFAILP-NGPKCRP-----------LALNPSGN-GVGVNS 656

Query: 640 TQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
            + G   S++T+AFQ          +   + + V  +I+ +VQ++  AL
Sbjct: 657 PRVGG--SLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL 703


>gi|109729920|tpg|DAA05774.1| TPA_inf: class IV HD-Zip protein HDZ44 [Selaginella moellendorffii]
          Length = 786

 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 145/572 (25%), Positives = 237/572 (41%), Gaps = 108/572 (18%)

Query: 5   SSGGSRDSRDSGGQKMIMDN-----GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE 59
           S  GS +   SGG+    DN      +Y R+TP Q++ +E L+ ECP P   +RQ+L RE
Sbjct: 83  SRSGSDNMDGSGGEDQ--DNEPPRKKRYHRHTPHQIQEMEALFKECPHPDDKQRQELSRE 140

Query: 60  CPILSNIEPKQIKVWFQNRRCR---EKQRKEASRLQAVNRKLTAMNKLLME--EN----- 109
                 +EP+Q+K WFQNRR +   +++R E S L+    KL A N  + E  +N     
Sbjct: 141 L----GLEPRQVKFWFQNRRTQLKAQQERAENSMLRLEIEKLRAENVTMREAIKNASCPS 196

Query: 110 -------DRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQ--- 159
                    +     QL  EN   + +    +TLA           SG     P      
Sbjct: 197 CGGPATLGEMSYDEQQLRIENARLKDELDRVSTLAAKYLGRPIPHLSGGGSQAPSSSLDL 256

Query: 160 ------HQHPPRDASPAGLLSIAEETLTEF-LSKATG--------TAVEWV------QMP 198
                 + H    A+   L+S   E++    LS+A          TA+E +      + P
Sbjct: 257 AVGGAANFHQGGAAAAGSLVSAGSESMRPGGLSEADKPMIVDLAVTAMEELYRLCQPEEP 316

Query: 199 GMKPGPDSIGIV------------AIS---HGCTGVAARACGLVGLDPTRVAEILKDRPS 243
              P PD    V            A+    +G    A R   LV ++   + E+L D   
Sbjct: 317 SWIPSPDGPKEVLNYDEYIRQYQSALGPRPYGMRTEATRESDLVMMNGVNLVELLMDSAK 376

Query: 244 WYRDCRSVE----VVNVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLED 295
           W     S+      ++VL TG +G     ++L+Y ++   + L P R+F+ +RY     D
Sbjct: 377 WAEIFPSIVSRAVTIDVLATGVTGNRNGAVQLMYAEMQVLSPLVPTREFYFVRYCKQHAD 436

Query: 296 GSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 355
           G   + + S++      +   AP   R    PSGYLI+    G S + +++H++ +  SV
Sbjct: 437 GVWGIVDVSVDAL----AREAAPSSNRCRRRPSGYLIQDMPNGYSKVTVLEHVEYDDRSV 492

Query: 356 PEVLRPLYESSTLI-AQKTTMAALRHLRQISQEVSQ----------PSVTGWGRRPAALR 404
             + +P   S     AQ+  +   R   +++  ++           P+ +  GRR  ++ 
Sbjct: 493 NRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLLATSISARDLGVIPNAS--GRR--SML 548

Query: 405 ALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSN 464
            L+QR++  F   ++  T   W+ L   G DDV V    S               P   +
Sbjct: 549 KLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVMTRKSVDN------------PGEPH 596

Query: 465 AVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
            ++ + A+ L   VPP  +  FLR+   R+EW
Sbjct: 597 GIVLSAATSLWLPVPPKRVFEFLRDERLRNEW 628


>gi|302794502|ref|XP_002979015.1| hypothetical protein SELMODRAFT_450554 [Selaginella moellendorffii]
 gi|300153333|gb|EFJ19972.1| hypothetical protein SELMODRAFT_450554 [Selaginella moellendorffii]
          Length = 786

 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 145/572 (25%), Positives = 237/572 (41%), Gaps = 108/572 (18%)

Query: 5   SSGGSRDSRDSGGQKMIMDN-----GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE 59
           S  GS +   SGG+    DN      +Y R+TP Q++ +E L+ ECP P   +RQ+L RE
Sbjct: 83  SRSGSDNMDGSGGEDQ--DNEPPRKKRYHRHTPHQIQEMEALFKECPHPDDKQRQELSRE 140

Query: 60  CPILSNIEPKQIKVWFQNRRCR---EKQRKEASRLQAVNRKLTAMNKLLME--EN----- 109
                 +EP+Q+K WFQNRR +   +++R E S L+    KL A N  + E  +N     
Sbjct: 141 L----GLEPRQVKFWFQNRRTQLKAQQERAENSMLRLEIEKLRAENVTMREAIKNASCPS 196

Query: 110 -------DRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQ--- 159
                    +     QL  EN   + +    +TLA           SG     P      
Sbjct: 197 CGGPATLGEMSYDEQQLRIENARLKDELDRVSTLAAKYLGRPIPHLSGGGSQAPSSSLDL 256

Query: 160 ------HQHPPRDASPAGLLSIAEETLTEF-LSKATG--------TAVEWV------QMP 198
                 + H    A+   L+S   E++    LS+A          TA+E +      + P
Sbjct: 257 AVGGAANFHQGGAAAAGSLVSAGSESMRPGGLSEADKPMIVDLAVTAMEELYRLCQPEEP 316

Query: 199 GMKPGPDSIGIV------------AIS---HGCTGVAARACGLVGLDPTRVAEILKDRPS 243
              P PD    V            A+    +G    A R   LV ++   + E+L D   
Sbjct: 317 SWIPSPDGPKEVLNYDEYIRQYQSALGPRPYGMRTEATRESDLVMMNGVNLVELLMDSAK 376

Query: 244 WYRDCRSVE----VVNVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLED 295
           W     S+      ++VL TG +G     ++L+Y ++   + L P R+F+ +RY     D
Sbjct: 377 WAEIFPSIVSRAVTIDVLATGVTGNRNGAVQLMYAEMQVLSPLVPTREFYFVRYCKQHAD 436

Query: 296 GSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 355
           G   + + S++      +   AP   R    PSGYLI+    G S + +++H++ +  SV
Sbjct: 437 GVWGIVDVSVDAL----AREAAPSSNRCRRRPSGYLIQDMPNGYSKVTVLEHVEYDDRSV 492

Query: 356 PEVLRPLYESSTLI-AQKTTMAALRHLRQISQEVSQ----------PSVTGWGRRPAALR 404
             + +P   S     AQ+  +   R   +++  ++           P+ +  GRR  ++ 
Sbjct: 493 NRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLLATSISARDLGVIPNAS--GRR--SML 548

Query: 405 ALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSN 464
            L+QR++  F   ++  T   W+ L   G DDV V    S               P   +
Sbjct: 549 KLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVMTRKSVDN------------PGEPH 596

Query: 465 AVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
            ++ + A+ L   VPP  +  FLR+   R+EW
Sbjct: 597 GIVLSAATSLWLPVPPKRVFEFLRDERLRNEW 628


>gi|414883577|tpg|DAA59591.1| TPA: putative receptor-like kinase family protein, partial [Zea
           mays]
          Length = 665

 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 9/148 (6%)

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
           RCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVS+LV +N + + +  ++ ++AT
Sbjct: 462 RCREKQRKESSRLQIVNRKLSAMNKLLMEENDRLQKQVSRLVLDNGYMKNRL-HSPSVAT 520

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           TDT+CE VVTSGQH+  P            P+ ++      +   L   T + V  +   
Sbjct: 521 TDTTCECVVTSGQHNQQPSSSASSTKGCEQPSRIVCYPNMVMHLMLISLTVSNVILIAAW 580

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGL 226
                    G  A+SH C+GVAARACGL
Sbjct: 581 S--------GFRAVSHNCSGVAARACGL 600


>gi|302813433|ref|XP_002988402.1| hypothetical protein SELMODRAFT_450553 [Selaginella moellendorffii]
 gi|300143804|gb|EFJ10492.1| hypothetical protein SELMODRAFT_450553 [Selaginella moellendorffii]
          Length = 817

 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 145/572 (25%), Positives = 237/572 (41%), Gaps = 108/572 (18%)

Query: 5   SSGGSRDSRDSGGQKMIMDN-----GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE 59
           S  GS +   SGG+    DN      +Y R+TP Q++ +E L+ ECP P   +RQ+L RE
Sbjct: 114 SRSGSDNMDGSGGEDQ--DNEPPRKKRYHRHTPHQIQEMEALFKECPHPDDKQRQELSRE 171

Query: 60  CPILSNIEPKQIKVWFQNRRCR---EKQRKEASRLQAVNRKLTAMNKLLME--EN----- 109
                 +EP+Q+K WFQNRR +   +++R E S L+    KL A N  + E  +N     
Sbjct: 172 L----GLEPRQVKFWFQNRRTQLKAQQERAENSMLRLEIEKLRAENVTMREAIKNASCPS 227

Query: 110 -------DRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQ--- 159
                    +     QL  EN   + +    +TLA           SG     P      
Sbjct: 228 CGGPATLGEMSYDEQQLRIENARLKDELDRVSTLAAKYLGRPIPHLSGGGSQAPSSSLDL 287

Query: 160 ------HQHPPRDASPAGLLSIAEETLTEF-LSKATG--------TAVEWV------QMP 198
                 + H    A+   L+S   E++    LS+A          TA+E +      + P
Sbjct: 288 AVGGAANFHQGGAAAAGSLVSAGSESMRPGGLSEADKPMIVDLAVTAMEELYRLCQPEEP 347

Query: 199 GMKPGPDSIGIV------------AIS---HGCTGVAARACGLVGLDPTRVAEILKDRPS 243
              P PD    V            A+    +G    A R   LV ++   + E+L D   
Sbjct: 348 SWIPSPDGPKEVLNYDEYIRQYQSALGPRPYGMRTEATRESDLVMMNGVNLVELLMDSAK 407

Query: 244 WYRDCRSVE----VVNVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLED 295
           W     S+      ++VL TG +G     ++L+Y ++   + L P R+F+ +RY     D
Sbjct: 408 WAEIFPSIVSRAVTIDVLATGVTGNRNGAVQLMYAEMQVLSPLVPTREFYFVRYCKQHAD 467

Query: 296 GSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 355
           G   + + S++      +   AP   R    PSGYLI+    G S + +++H++ +  SV
Sbjct: 468 GVWGIVDVSVDAL----AREAAPSSNRCRRRPSGYLIQDMPNGYSKVTVLEHVEYDDRSV 523

Query: 356 PEVLRPLYESSTLI-AQKTTMAALRHLRQISQEVSQ----------PSVTGWGRRPAALR 404
             + +P   S     AQ+  +   R   +++  ++           P+ +  GRR  ++ 
Sbjct: 524 NRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLLATSISARDLGVIPNAS--GRR--SML 579

Query: 405 ALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSN 464
            L+QR++  F   ++  T   W+ L   G DDV V    S               P   +
Sbjct: 580 KLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVMTRKSVDN------------PGEPH 627

Query: 465 AVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
            ++ + A+ L   VPP  +  FLR+   R+EW
Sbjct: 628 GIVLSAATSLWLPVPPKRVFEFLRDERLRNEW 659


>gi|148283425|gb|ABQ57293.1| hox33, partial [Oryza sativa Indica Group]
          Length = 106

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/106 (58%), Positives = 82/106 (77%), Gaps = 1/106 (0%)

Query: 426 WSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLR 485
           WS+L SDG +D+T+ VNSSP+K++G  +S    F ++   +LCAKASMLLQ+VPPA+L+R
Sbjct: 1   WSLLSSDGSEDITISVNSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQNVPPALLVR 60

Query: 486 FLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF-GGQVILPL 530
           FLREHRSEWAD  +DAYSAA+++A P ++P  R   F G QVILPL
Sbjct: 61  FLREHRSEWADPGVDAYSAASLRASPYAVPGLRTSGFMGSQVILPL 106


>gi|10998865|gb|AAG26011.1|AC022354_8 HD-zip-like protein, 3' partial [Arabidopsis thaliana]
          Length = 69

 Score =  124 bits (311), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/62 (88%), Positives = 59/62 (95%)

Query: 17 GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
          G+   +DNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 8  GKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67

Query: 77 NR 78
          NR
Sbjct: 68 NR 69


>gi|359485664|ref|XP_002273837.2| PREDICTED: homeobox-leucine zipper protein HDG2 [Vitis vinifera]
          Length = 762

 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 164/737 (22%), Positives = 282/737 (38%), Gaps = 151/737 (20%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 99  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 154

Query: 84  -QRKEASRLQAVNRKL----------------------TAM-------------NKLLME 107
            +R E ++L++ N KL                      TA+             N  L E
Sbjct: 155 HERHENTQLRSENEKLRTENLRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 214

Query: 108 ENDRLQ----KQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHP 163
           E DR+     K V + V       Q       L   +   +  +       +   +  + 
Sbjct: 215 EIDRISAIAAKYVGKPVVNYPLIPQVPTRPLDLGVGNFGAQPGLGGELFGASDLLRSING 274

Query: 164 PRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIVAI 212
           P +A    ++ +A   + E    A            GT  E  +   ++  P  IG    
Sbjct: 275 PTEADKPMIIELAVAAMEELFRMAQMGEPLWLPSLDGTTTELSEDEYIRSFPRGIGPKPP 334

Query: 213 SHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT---- 264
              C   A+R   +V ++   + EIL D   W      +      + VL TG +G     
Sbjct: 335 GFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGA 392

Query: 265 IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE 324
            +++  +   P+ L P R+ + +RY     DG+  V + SL+N +  P        VR  
Sbjct: 393 FQVMTAEFQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSP-------VVRCR 445

Query: 325 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQ 383
             PSG LI+    G S +  V+H++++   V  + + L  S      K  +A L R   +
Sbjct: 446 RRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNIYKQLVNSGLAFGAKRWVATLDRQCER 505

Query: 384 ISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID 435
           ++  ++    TG         GR+  ++  L++R+   F   ++  T   W+ L   G D
Sbjct: 506 LASAMATNIPTGEVGVITSQEGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGSGAD 563

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSE 493
           DV V    S               P     ++ + A+     VPP  +  FLR+   RSE
Sbjct: 564 DVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRSE 611

Query: 494 WADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRE 553
           W     D  S                    G V+  +AH    ++    + L   A+  +
Sbjct: 612 W-----DILS-------------------NGGVVQEMAHIANGQDTGNCVSLLRSANSSQ 647

Query: 554 DMIMPSDIFLLQLCSGVDENAVGNCAELV-FAPIDASFSDDAPIIPSGFRIIPLDSGKDT 612
                S++ +LQ      E+   + A  V +AP+D               ++ ++   + 
Sbjct: 648 -----SNMLILQ------ESCTDSTASFVIYAPVD---------------VVAMNMVLNG 681

Query: 613 PSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQY 672
             P+    L S   + P G  A G    + GS  S++T+AFQ   +      ++  +   
Sbjct: 682 GDPDYVALLPSGFAILPDGTTAHGGVIGEVGSGGSLLTVAFQILVDSVPTAKLSLGSVAT 741

Query: 673 VRGIIA-SVQRVALALS 688
           V  +IA +V R+  A+S
Sbjct: 742 VNNLIACTVDRIKAAVS 758


>gi|255554965|ref|XP_002518520.1| homeobox protein, putative [Ricinus communis]
 gi|223542365|gb|EEF43907.1| homeobox protein, putative [Ricinus communis]
          Length = 727

 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 133/546 (24%), Positives = 223/546 (40%), Gaps = 108/546 (19%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 61  RYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 116

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 114
            +R+E S L+A N KL A N    E                            EN RL++
Sbjct: 117 HERQENSILKAENEKLRAENNRYKEALSNASCPNCGGPATLGEISFDEQHLRIENARLRE 176

Query: 115 QVSQL------------VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQH 162
           ++ +L               +         +  L  ++   +S      +  T   +   
Sbjct: 177 EIDRLSGIAAKYIGKPISSLSHLSSHLPSRSLDLGVSNFGTQSGYVGEMYGATDFLRSIT 236

Query: 163 PPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG-------------MKPGPDSIGI 209
            P +A    ++ +A   + E +  A      WV  PG             ++  P  IG 
Sbjct: 237 GPTEAEKPMIVELAVAAMEELMRMAQAGDPLWV--PGENSTTEVLNEEEYLRAFPRGIGP 294

Query: 210 VAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT- 264
             +  G    A+R   +V ++   + EIL D   W     S+      + +L TG +G  
Sbjct: 295 RPL--GLRSEASRESAVVIMNHVNLVEILMDVNQWSTVFCSIVSRAMTLEILSTGVAGNY 352

Query: 265 ---IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 321
              ++++  +   P+ L P R+ + +RY     DG+  V + SL+N +  P         
Sbjct: 353 NGALQVMTAEFQVPSPLVPTRENYFVRYCKQHVDGTWAVVDVSLDNLRPSP-------IA 405

Query: 322 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RH 380
           R+    SG +I+    G S +  ++H++++  SV  + RPL  S      K  +A L R 
Sbjct: 406 RSRRRLSGCVIQDLPNGYSKVTWIEHIEVDDRSVHSLYRPLINSGLAFGAKRWVAILDRQ 465

Query: 381 LRQI--SQEVSQPS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDG 433
             ++  S  ++ P+     +T    R + L+ L++R+   F   +   T   W+ L + G
Sbjct: 466 CERLASSMAINIPAGDLCVITSPEGRKSMLK-LAERMVMSFCSGVGASTAHAWTTLSATG 524

Query: 434 IDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE- 489
            DDV V    S   P +  G+              VLCA  S  L  VPP  + +FL + 
Sbjct: 525 SDDVRVMTRKSMDDPGRPPGI--------------VLCAATSFWLP-VPPKRVFQFLSDE 569

Query: 490 -HRSEW 494
            HRSEW
Sbjct: 570 NHRSEW 575


>gi|297739295|emb|CBI28946.3| unnamed protein product [Vitis vinifera]
          Length = 757

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 163/737 (22%), Positives = 280/737 (37%), Gaps = 149/737 (20%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 92  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 147

Query: 84  -QRKEASRLQAVNRKL----------------------TAM-------------NKLLME 107
            +R E ++L++ N KL                      TA+             N  L E
Sbjct: 148 HERHENTQLRSENEKLRTENLRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLRE 207

Query: 108 ENDRLQ----KQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHP 163
           E DR+     K V + V       Q       L   +   +  +       +   +  + 
Sbjct: 208 EIDRISAIAAKYVGKPVVNYPLIPQVPTRPLDLGVGNFGAQPGLGGELFGASDLLRSING 267

Query: 164 PRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMKPGPDSIGIVAI 212
           P +A    ++ +A   + E    A            GT  E  +   ++  P  IG    
Sbjct: 268 PTEADKPMIIELAVAAMEELFRMAQMGEPLWLPSLDGTTTELSEDEYIRSFPRGIGPKPP 327

Query: 213 SHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT---- 264
              C   A+R   +V ++   + EIL D   W      +      + VL TG +G     
Sbjct: 328 GFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGA 385

Query: 265 IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE 324
            +++  +   P+ L P R+ + +RY     DG+  V + SL+N +  P        VR  
Sbjct: 386 FQVMTAEFQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSP-------VVRCR 438

Query: 325 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQ 383
             PSG LI+    G S +  V+H++++   V  + + L  S      K  +A L R   +
Sbjct: 439 RRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNIYKQLVNSGLAFGAKRWVATLDRQCER 498

Query: 384 ISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID 435
           ++  ++    TG         GR+  ++  L++R+   F   ++  T   W+ L   G D
Sbjct: 499 LASAMATNIPTGEVGVITSQEGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGSGAD 556

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSE 493
           DV V    S               P     ++ + A+     VPP  +  FLR+   RSE
Sbjct: 557 DVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRSE 604

Query: 494 WADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRE 553
           W     D  S                    G V+  +AH    ++    + L  +     
Sbjct: 605 W-----DILS-------------------NGGVVQEMAHIANGQDTGNCVSLLRVNSANS 640

Query: 554 DMIMPSDIFLLQLCSGVDENAVGNCAELV-FAPIDASFSDDAPIIPSGFRIIPLDSGKDT 612
                S++ +LQ      E+   + A  V +AP+D               ++ ++   + 
Sbjct: 641 SQ---SNMLILQ------ESCTDSTASFVIYAPVD---------------VVAMNMVLNG 676

Query: 613 PSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQY 672
             P+    L S   + P G  A G    + GS  S++T+AFQ   +      ++  +   
Sbjct: 677 GDPDYVALLPSGFAILPDGTTAHGGVIGEVGSGGSLLTVAFQILVDSVPTAKLSLGSVAT 736

Query: 673 VRGIIA-SVQRVALALS 688
           V  +IA +V R+  A+S
Sbjct: 737 VNNLIACTVDRIKAAVS 753


>gi|147800352|emb|CAN62139.1| hypothetical protein VITISV_039239 [Vitis vinifera]
          Length = 708

 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 158/737 (21%), Positives = 283/737 (38%), Gaps = 151/737 (20%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 45  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 100

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 114
            +R E S L+A N KL A N    E                            EN RL+ 
Sbjct: 101 HERHENSNLRAENEKLRAENIRYKEALSNATCPHCGGPASIGEMSFDEQHLRIENARLRD 160

Query: 115 Q----VSQLVYENT-----FFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPR 165
           +     SQ+ +E            +  +  L   +   +S +    +      +    P 
Sbjct: 161 EDFWDCSQVCWEPMVSYPHLSTHTSSRSLDLGVGNFGAQSGIVGDMYGGGDLLRSVSLPT 220

Query: 166 DASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG-----------MKPGPDSIGIVAISH 214
           +A    ++ +A   + E +  A      W+               ++  P  IG   +  
Sbjct: 221 EADKPMIVELAVAAMEELIRMAQAGEPLWIPTSDNSTEILSEDEYLRTFPRGIGPKPL-- 278

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----IE 266
           G    A+R   +V ++   + EIL D   W      +      + VL TG +G     ++
Sbjct: 279 GLKSEASRETAVVIMNHISLVEILMDVNQWSSVFSGIVSRAMTLEVLSTGVAGNYNGALQ 338

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEML 326
           ++  +   P+ L P R+ + +RY     DG+  V + SL+N ++GP         R    
Sbjct: 339 VMTAEFQVPSPLVPTRENYFVRYCKHHPDGTWAVVDVSLDNLRSGP-------ITRNRRR 391

Query: 327 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQIS 385
           PSG LI+    G S +  V+H++++  +V  + RPL  S      K  +A L R   +++
Sbjct: 392 PSGCLIQELPNGYSKVIWVEHVEVDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCERLA 451

Query: 386 QEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
             ++     G         GR+  ++  L++R+   F   +   T   W+ L   G DDV
Sbjct: 452 SAMASNIPAGDVGVITSPEGRK--SMLKLAERMVMSFCAGVGASTTHTWTTLSGSGADDV 509

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWA 495
            V    S               P     ++ + A+     VPP  +  FLR    RSEW 
Sbjct: 510 RVMTRKSMDD------------PGRPPGIVLSAATSFWIPVPPKRVFDFLRAENSRSEW- 556

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE---FLEVIKLENMAHYR 552
               D  S                    G ++  +AH     +    + ++++ +    +
Sbjct: 557 ----DILS-------------------NGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQ 593

Query: 553 EDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDT 612
            +M++     L + C+    +  G  + +++AP+D               I+ ++     
Sbjct: 594 SNMLI-----LQESCT----DPTG--SYVIYAPVD---------------IVAMNVVLSG 627

Query: 613 PSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQY 672
             P+    L S   + P G    G      GS  S++T+AFQ   +      ++  +   
Sbjct: 628 GDPDYVALLPSGFAILPDGAVLHGGGILDVGSGGSLLTVAFQILVDSAPTAKLSLGSVAT 687

Query: 673 VRGII-ASVQRVALALS 688
           V  +I  +V+R+  A+S
Sbjct: 688 VNSLIKCTVERIKAAVS 704


>gi|225444363|ref|XP_002266688.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR 2
           [Vitis vinifera]
 gi|302144076|emb|CBI23181.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 156/740 (21%), Positives = 280/740 (37%), Gaps = 154/740 (20%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 60  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 115

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 114
            +R E S L+A N KL A N    E                            EN RL+ 
Sbjct: 116 HERHENSNLRAENEKLRAENIRYKEALSNATCPHCGGPASIGEMSFDEQHLRIENARLRD 175

Query: 115 QVSQ------------LVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQH 162
           ++ +            +V         +  +  L   +   +S +    +      +   
Sbjct: 176 EIDRISGIAAKYVGKPMVSYPHLSTHTSSRSLDLGVGNFGAQSGIVGDMYGGGDLLRSVS 235

Query: 163 PPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG-----------MKPGPDSIGIVA 211
            P +A    ++ +A   + E +  A      W+               ++  P  IG   
Sbjct: 236 LPTEADKPMIVELAVAAMEELIRMAQAGEPLWIPTSDNSTEILSEDEYLRTFPRGIGPKP 295

Query: 212 ISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT--- 264
           +  G    A+R   +V ++   + EIL D   W      +      + VL TG +G    
Sbjct: 296 L--GLKSEASRETAVVIMNHISLVEILMDVNQWSSVFSGIVSRAMTLEVLSTGVAGNYNG 353

Query: 265 -IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRA 323
            ++++  +   P+ L P R+ + +RY     DG+  V + SL+N ++GP         R 
Sbjct: 354 ALQVMTAEFQVPSPLVPTRENYFVRYCKHHPDGTWAVVDVSLDNLRSGP-------ITRN 406

Query: 324 EMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLR 382
              PSG LI+    G S +  V+H++++  +V  + RPL  S      K  +A L R   
Sbjct: 407 RRRPSGCLIQELPNGYSKVIWVEHVEVDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCE 466

Query: 383 QISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           +++  ++     G         GR+  ++  L++R+   F   +   T   W+ L   G 
Sbjct: 467 RLASAMASNIPAGDVGVITSPEGRK--SMLKLAERMVMSFCAGVGASTTHTWTTLSGSGA 524

Query: 435 DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RS 492
           DDV V    S               P     ++ + A+     VPP  +  FLR    RS
Sbjct: 525 DDVRVMTRKSMDD------------PGRPPGIVLSAATSFWIPVPPKRVFDFLRAENSRS 572

Query: 493 EWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE---FLEVIKLENMA 549
           EW     D  S                    G ++  +AH     +    + ++++ +  
Sbjct: 573 EW-----DILS-------------------NGGLVQEMAHIANGRDPGNCVSLLRVNSAN 608

Query: 550 HYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSG 609
             + +M++     L + C+    + V      ++AP+D               I+ ++  
Sbjct: 609 SSQSNMLI-----LQESCTDPTGSYV------IYAPVD---------------IVAMNVV 642

Query: 610 KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMA 669
                P+    L S   + P G    G      GS  S++T+AFQ   +      ++  +
Sbjct: 643 LSGGDPDYVALLPSGFAILPDGAVLHGGGILDVGSGGSLLTVAFQILVDSAPTAKLSLGS 702

Query: 670 RQYVRGII-ASVQRVALALS 688
              V  +I  +V+R+  A+S
Sbjct: 703 VATVNSLIKCTVERIKAAVS 722


>gi|194696754|gb|ACF82461.1| unknown [Zea mays]
          Length = 83

 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 61/70 (87%), Gaps = 2/70 (2%)

Query: 12 SRDSGGQKMI--MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
          S DSGG   +  MD+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPK
Sbjct: 14 SSDSGGFDKVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPK 73

Query: 70 QIKVWFQNRR 79
          QIKVWFQNRR
Sbjct: 74 QIKVWFQNRR 83


>gi|45593105|gb|AAS68141.1| homeodomain leucine zipper protein 29 [Oryza sativa Japonica Group]
          Length = 93

 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 58/94 (61%), Positives = 74/94 (78%), Gaps = 1/94 (1%)

Query: 473 MLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAH 532
           MLLQDV P  LL+FLREHRS+WADS++DA+ A+ +K   C+LP+ R G F GQVILPLAH
Sbjct: 1   MLLQDVSPPSLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSGQVILPLAH 60

Query: 533 TIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQL 566
           T E EEFLEVIKL N ++Y +D ++  D+FLLQ+
Sbjct: 61  TFEPEEFLEVIKLGNASNY-QDTLVHRDLFLLQM 93


>gi|170678770|gb|ACB31445.1| PHV, partial [Arabidopsis thaliana]
 gi|170678772|gb|ACB31446.1| PHV, partial [Arabidopsis thaliana]
 gi|170678774|gb|ACB31447.1| PHV, partial [Arabidopsis thaliana]
 gi|170678776|gb|ACB31448.1| PHV, partial [Arabidopsis thaliana]
 gi|170678778|gb|ACB31449.1| PHV, partial [Arabidopsis thaliana]
 gi|170678780|gb|ACB31450.1| PHV, partial [Arabidopsis thaliana]
 gi|170678782|gb|ACB31451.1| PHV, partial [Arabidopsis thaliana]
 gi|170678784|gb|ACB31452.1| PHV, partial [Arabidopsis thaliana]
 gi|170678786|gb|ACB31453.1| PHV, partial [Arabidopsis thaliana]
 gi|170678788|gb|ACB31454.1| PHV, partial [Arabidopsis thaliana]
 gi|170678790|gb|ACB31455.1| PHV, partial [Arabidopsis thaliana]
 gi|170678792|gb|ACB31456.1| PHV, partial [Arabidopsis thaliana]
 gi|170678794|gb|ACB31457.1| PHV, partial [Arabidopsis thaliana]
 gi|170678796|gb|ACB31458.1| PHV, partial [Arabidopsis thaliana]
 gi|170678798|gb|ACB31459.1| PHV, partial [Arabidopsis thaliana]
 gi|170678800|gb|ACB31460.1| PHV, partial [Arabidopsis thaliana]
 gi|170678802|gb|ACB31461.1| PHV, partial [Arabidopsis thaliana]
 gi|170678804|gb|ACB31462.1| PHV, partial [Arabidopsis thaliana]
 gi|170678806|gb|ACB31463.1| PHV, partial [Arabidopsis thaliana]
 gi|170678808|gb|ACB31464.1| PHV, partial [Arabidopsis thaliana]
 gi|170678810|gb|ACB31465.1| PHV, partial [Arabidopsis thaliana]
 gi|170678812|gb|ACB31466.1| PHV, partial [Arabidopsis thaliana]
 gi|170678814|gb|ACB31467.1| PHV, partial [Arabidopsis thaliana]
 gi|170678816|gb|ACB31468.1| PHV, partial [Arabidopsis thaliana]
          Length = 73

 Score =  118 bits (295), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 168 SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLV 227
           +PA LLSIAEETL EFL KATGTAV+WVQM GMKPGPDSIGIVA+S  C+G+AARACGLV
Sbjct: 3   NPANLLSIAEETLAEFLCKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLV 62

Query: 228 GLDPTRVAEIL 238
            L+P +VAEIL
Sbjct: 63  SLEPMKVAEIL 73


>gi|397134751|gb|AFO11041.1| HD-1A [Gossypium hirsutum]
          Length = 725

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 153/710 (21%), Positives = 279/710 (39%), Gaps = 164/710 (23%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K   
Sbjct: 61  YHRHTQRQIQEMEAFFKECPHPDDKQRKELGREL----GLEPLQVKFWFQNKRTQMKAQH 116

Query: 84  QRKEASRLQAVNRKLTAMN----------------------------KLLMEENDRLQKQ 115
           +R E + L+A N KL A N                            +LL  EN RL+++
Sbjct: 117 ERHENAILKAENEKLRAENNRYKEALSNATCPSCGGPAALGEMSFDEQLLRIENARLREE 176

Query: 116 V---------------SQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQH 160
           +               S L + ++    ++ +   L  ++   +S             + 
Sbjct: 177 IDRISGIAAKYVGKPLSSLPHLSSHLHSRSVD---LGASNFGTQSGFVGEMDRSGDLLRS 233

Query: 161 QHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISH------ 214
              P +A    ++ +A   + E +  A      WV      PG +SI +++         
Sbjct: 234 VSGPTEADKPMIVELAVAAMEELIRMAQSGEPLWV------PGDNSIDVLSEDEYLRTFP 287

Query: 215 --------GCTGVAARACGLVGLDPTRVAEILKDRPSWYRD-CRSVE---VVNVLPTGSS 262
                   G    A+R   +V ++   + EIL D   W    C  V     + VL TG +
Sbjct: 288 RGIGPKPLGLRSEASRESAVVIMNHVNLVEILMDVNQWSSVFCGIVSRAMTLEVLSTGVA 347

Query: 263 GT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
           G     ++++  +   P+ L P R+ + +RY     DG+  V + SL+N +  P      
Sbjct: 348 GNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHIDGTWAVVDVSLDNLRPNP------ 401

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
              +    PSG LI+    G S +  V+H++++  ++  + RP+  S      K  +A L
Sbjct: 402 -MSKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRAIHNIYRPVVNSGLAFGAKRWVATL 460

Query: 379 -RHLRQISQEVSQ--PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
            R   +++  ++   P+     +T    R + L+ L++R+   F   +   T   W+ L 
Sbjct: 461 DRQCERLASSMASNIPAGDLCVITSLEGRKSMLK-LAERMVTSFCTGVGASTAHAWTSLS 519

Query: 431 SDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH 490
           + G DDV V    S               P     ++ + A+     VPP  +  FLR+ 
Sbjct: 520 ATGSDDVRVMTRKSMDD------------PGRPPGIVLSAATSFWIPVPPKRVFDFLRDE 567

Query: 491 --RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE---FLEVIKL 545
             RSEW     D  S                    G ++  +AH     +    + ++++
Sbjct: 568 NSRSEW-----DILS-------------------NGGLVQEMAHIANGRDPGNCVSLLRV 603

Query: 546 ENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
            +    + +M++     L + C+    +A G  + +++AP+D               I+ 
Sbjct: 604 NSANSSQSNMLI-----LQESCT----DATG--SYVIYAPVD---------------IVA 637

Query: 606 LDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
           ++       P+    L S   + P G   +G    + GS  S++T+AFQ 
Sbjct: 638 MNVVLSGGDPDYLALLPSGFAILPDGPGVNGGGILEIGSGGSLLTVAFQI 687


>gi|147826488|emb|CAN66212.1| hypothetical protein VITISV_013736 [Vitis vinifera]
          Length = 754

 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 158/744 (21%), Positives = 274/744 (36%), Gaps = 166/744 (22%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 84
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 92  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 147

Query: 85  ---------RKEASRLQAVNRKL---------------TAMNKLLMEENDRLQKQVSQLV 120
                    R E  +L+  N +                TA+ ++  +E+         L 
Sbjct: 148 HERHENTQLRSENEKLRTENLRYREALSNASCPNCGGPTAIGEMSFDEH--------HLR 199

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHP----------------- 163
            EN   R++    + +A        V     +   P Q    P                 
Sbjct: 200 LENARLREEIDRISAIAAKYVGKPVV----NYPXIPPQVPTRPLDLGVGNFGAQPGLGGE 255

Query: 164 -------------PRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPG 199
                        P +A    ++ +A   + E    A            GT  E  +   
Sbjct: 256 LFGASDLLRSINGPTEADKPMIIELAVAAMEELFRMAQMGEPLWLPSLDGTTTELSEDEY 315

Query: 200 MKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVN 255
           ++  P  IG       C   A+R   +V ++   + EIL D   W      +      + 
Sbjct: 316 IRSFPRGIGPKPAGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLE 373

Query: 256 VLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 311
           VL TG +G      +++  +   P+ L P R+ + +RY     DG+  V + SL+N +  
Sbjct: 374 VLSTGVAGNYNGAFQVMTAEFQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPS 433

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
           P        VR    PSG LI+    G S +  V+H++++   V  + + L  S      
Sbjct: 434 P-------VVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNIYKQLVNSGLAFGA 486

Query: 372 KTTMAAL-RHLRQISQEVSQ--PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
           K  +A L R   +++  ++   P+V        ++  L++R+   F   ++  T   W+ 
Sbjct: 487 KRWVATLDRQCERLASAMATNIPTVITSQEGRKSMLKLAERMVISFCAGVSASTAHTWTT 546

Query: 429 LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
           L   G DDV V    S               P     ++ + A+     VPP  +  FLR
Sbjct: 547 LSGSGADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLR 594

Query: 489 EH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLE 546
           +   RSEW     D  S                    G V+  +AH    ++    + L 
Sbjct: 595 DENSRSEW-----DILS-------------------NGGVVQEMAHIANGQDTGNCVSLL 630

Query: 547 NMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELV-FAPIDASFSDDAPIIPSGFRIIP 605
            +          S++ +LQ      E+   + A  V +AP+D               ++ 
Sbjct: 631 RVNSANSSQ---SNMLILQ------ESCTDSTASFVIYAPVD---------------VVA 666

Query: 606 LDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENV 665
           ++   +   P+    L S   + P G  A G    + GS  S++T+AFQ   +      +
Sbjct: 667 MNMVLNGGDPDYVALLPSGFAILPDGTTAHGGVIGEVGSGGSLLTVAFQILVDSVPTAKL 726

Query: 666 ASMARQYVRGIIA-SVQRVALALS 688
           +  +   V  +IA +V R+  A+S
Sbjct: 727 SLGSVATVNNLIACTVDRIKAAVS 750


>gi|413921242|gb|AFW61174.1| hypothetical protein ZEAMMB73_060529 [Zea mays]
          Length = 570

 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 79/109 (72%)

Query: 610 KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMA 669
           +D  S  RTLDLAS+L+VG    +ASGD+     + + V+TI FQF +E HLQ++VA+MA
Sbjct: 106 QDGVSSGRTLDLASSLDVGSAAPQASGDAPPDDYNLRYVLTITFQFPYETHLQDSVATMA 165

Query: 670 RQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSY 718
            QYV  ++++VQRV++A+SPS  G NAG R   G PEA TLARW+CQSY
Sbjct: 166 HQYVCSVVSTVQRVSMAISPSESGLNAGQRMLSGFPEAATLARWVCQSY 214


>gi|397134753|gb|AFO11042.1| HD-1D [Gossypium hirsutum]
          Length = 725

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 158/713 (22%), Positives = 279/713 (39%), Gaps = 168/713 (23%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 60  RYHRHTQRQIQEMEAFFKECPHPDDKQRKELGREL----GLEPLQVKFWFQNKRTQMKAQ 115

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 114
            +R E + L+A N KL A N    E                            EN RL++
Sbjct: 116 HERHENAILKAENEKLRAENNRYKEALSNATCPSCGGPAALGEMSFDEQHLRIENARLRE 175

Query: 115 QV---------------SQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQ 159
           ++               S L + ++    ++   A L  ++   +S             +
Sbjct: 176 EIDRISGIAAKYVGKPLSSLPHLSSHLHSRS---ADLGASNFGNQSGFVGEMDRSGDLLR 232

Query: 160 HQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG------------MKPGPDSI 207
               P +A    ++ +A   + E +  A      WV  PG            ++  P  I
Sbjct: 233 SVSGPTEADKPMIVELAVAAMEELIRMAQSGEPLWV--PGDNSTDVLNEDEYLRTFPRGI 290

Query: 208 GIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD-CRSVE---VVNVLPTG--- 260
           G   +  G    A+R   +V ++   + EIL D   W    C  V     + VL TG   
Sbjct: 291 GPKPL--GLRSEASRESAVVIMNHVNLVEILMDVNQWSSVFCGIVSRAMTLEVLSTGVAG 348

Query: 261 -SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
             +G ++++  +   P+ L P R+ +  RY     DG+  V + SL+N +  P       
Sbjct: 349 KCNGALQVMTAEFQVPSPLVPTRENYFARYCKQHIDGTWAVVDVSLDNLRPNP------- 401

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL- 378
             +    PSG LI+    G S +  V+H++++  +V  + RP+  S      K  +A L 
Sbjct: 402 MSKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRAVHNIYRPVVNSGLAFGAKRWVATLD 461

Query: 379 RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
           R   +++  ++     G         GR+  ++  L++R+   F   +   T   W+ L 
Sbjct: 462 RQCERLASSMASNIPAGDLCVITSPEGRK--SMLKLAERMVTSFCTGVGASTAHAWTTLS 519

Query: 431 SDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL 487
           + G DDV V    S   P +  G+              VL A  S  +Q VPP  +  FL
Sbjct: 520 ATGSDDVRVMTRKSMDDPGRPPGI--------------VLSAATSFWIQ-VPPKRVFDFL 564

Query: 488 REH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE---FLEV 542
           R+   RSEW     D  S                    G ++  +AH     +    + +
Sbjct: 565 RDENSRSEW-----DILS-------------------NGGLVQEMAHIANGRDPGNCVSL 600

Query: 543 IKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFR 602
           +++ +    + +M++     L + C+    +A G  + +++AP++               
Sbjct: 601 LRVNSANSSQSNMLI-----LQESCT----DAKG--SYVIYAPVN--------------- 634

Query: 603 IIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
           I+ ++       P+    L S   + P G   +G    + GS  S++T+AFQ 
Sbjct: 635 IVAMNIVLSGGDPDYVALLPSGFAILPDGPGVNGGGILEIGSGGSLLTVAFQI 687


>gi|449434374|ref|XP_004134971.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 721

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 129/541 (23%), Positives = 215/541 (39%), Gaps = 98/541 (18%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R +L RE      +EP Q+K WFQN+R + K  
Sbjct: 52  RYNRHTQHQIQEMEAFFKECPHPDDKQRMELSREL----GLEPLQVKFWFQNKRTQMKAQ 107

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME-----------------------------ENDRLQ 113
            +R E + L+A N KL A N    E                             EN RL+
Sbjct: 108 HERHENAILKAENEKLRAENIRYREAFAHSTCPNCGSSSTALGEMSFDDQHLRIENSRLR 167

Query: 114 KQVSQLVYENTF----FRQQTQNAAT----LATTDTSCESVVTSGQHHLTPQ--QQHQHP 163
            ++ ++    +     + Q   NA T    L  T+   +S    G+ +      +    P
Sbjct: 168 DEIERMSGYGSKCTKPYYQLPTNAPTRSLDLGITNFGPQSSGFVGEMYGAADFFRSISRP 227

Query: 164 PRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSI-----------GIVAI 212
                P  ++ +A   + E    A G    WV   G   G   +           GIV  
Sbjct: 228 SEGEKPV-IVELAVSGMEELRRMAQGGEPLWVAGDGKSSGEVVLNEAEYLRSFGGGIVGK 286

Query: 213 SHGCTGVAARACGLVGLDPTRVAEILKDRPSW-------YRDCRSVEVVN-VLPTGSSGT 264
             G    A+R   +V ++  ++ +I  D   W            +VE+++  LP   +G 
Sbjct: 287 PMGFRTEASRVSAVVFMNHMKLVDIFMDATQWSTVFCGIVSRASTVEILSPGLPGNFNGA 346

Query: 265 IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE 324
           + ++  +   P+ L P R+ + +RY     DGS  V + SL+  +  P     P+  R  
Sbjct: 347 LHVMSAEFQVPSPLVPTRENYFVRYCKQQTDGSWAVADVSLDTLRPSP----IPNTRRK- 401

Query: 325 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQ 383
             PSG LI+    G S I  V+H++++   VP + R L  S      K  +A L R   +
Sbjct: 402 --PSGCLIQELPNGYSKITWVEHVEVDETGVPTMYRTLVNSGLAFGAKRWVATLDRQSER 459

Query: 384 ISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID 435
            +  ++    TG         GR+  ++  L++R+   F   +   +   W+ L +   D
Sbjct: 460 FATSIATTIPTGDLRVISSIEGRK--SMLKLAERMVTSFCAGVGASSVHAWTALPAAAGD 517

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSE 493
           +V V    S  +            P     V+ + A+     V P ++  FLR+   RSE
Sbjct: 518 EVRVVTRKSTDE------------PGRPPGVVLSAATSFWIPVSPKVVFDFLRKEKSRSE 565

Query: 494 W 494
           W
Sbjct: 566 W 566


>gi|345195194|tpg|DAA34962.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413924373|gb|AFW64305.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 698

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 227/556 (40%), Gaps = 101/556 (18%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           GG        +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WF
Sbjct: 10  GGSDAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWF 65

Query: 76  QNRRCREK---QRKEASRLQAVNRKLTAMNKLLME------------------------- 107
           QNRR + K   +R++   L+A N K+   N  + E                         
Sbjct: 66  QNRRTQMKAQHERQDNCFLRAENDKIRCENIAMREALRSVICPTCGGPPVADDYFDEQKL 125

Query: 108 --ENDRLQKQVSQLVYENTFFRQQ-------TQNAATLATTDTSCESV--------VTSG 150
             EN RL++++ ++    + +  +        Q A ++++ D S   +        + SG
Sbjct: 126 RMENARLKEELDRVSSLTSKYLGRPITQLPPAQAALSMSSLDLSVGGLGSPSLDLDLLSG 185

Query: 151 QHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKP-GPDSIGI 209
                P      P  +     +  +A   + E +  A      WV+  G +    D+   
Sbjct: 186 GSSGYPPFHLPMPVSEMERPMMAEMATRAMDELIRMAQAGEHLWVKAGGREVLNVDTYDS 245

Query: 210 VAISHGCTGV--------AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVV 254
           V    G             +R  GLV +    + ++  D   W           R+V+V+
Sbjct: 246 VFAKPGAASFRGPDVHVEGSRDSGLVFMSAVGLVDMFMDSSKWTEFFPAIVSKARTVDVL 305

Query: 255 NVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSM 314
                G S ++ L+Y +L+  + + P R+F  LRY   +E G   + + S++  Q+    
Sbjct: 306 VNGMAGRSESLVLMYEELHVMSPVVPTREFCFLRYCRQIERGLWAIADISVDLQQHDARF 365

Query: 315 PQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL--RPLYESSTLIAQK 372
              P   R+  LPSG LI     G S +  V+HM++E   VP  L  R L  S       
Sbjct: 366 GAPPS--RSCRLPSGCLIADMADGSSKVTWVEHMEIED-RVPIHLLYRDLILSGAAFGAH 422

Query: 373 TTMAALRHLRQIS----------QEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFT 422
             +AAL+   +            ++++   VT  G+R  ++  LSQR+   F  +L+   
Sbjct: 423 RWLAALQRACERCACLVPAGMPHRDIAVAGVTPEGKR--SMMKLSQRMVSSFCASLSASQ 480

Query: 423 DEGWSMLE--SDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
              W+ L   SD    VTVH ++ P +  GV              VL A  S+ L  VP 
Sbjct: 481 LHRWTTLSGPSDVGVRVTVHRSTDPGQPSGV--------------VLSAATSIWLP-VPC 525

Query: 481 AILLRFLR-EH-RSEW 494
             +  F+R EH RS+W
Sbjct: 526 DRVFAFVRDEHTRSQW 541


>gi|326525997|dbj|BAJ93175.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 777

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 176/763 (23%), Positives = 299/763 (39%), Gaps = 191/763 (25%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 118 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 173

Query: 84  -QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS---------------------QLVY 121
            +R E S+L+A N KL A       EN R ++ +S                      L  
Sbjct: 174 HERHENSQLRADNDKLRA-------ENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRV 226

Query: 122 ENTFFRQQTQNAATLATTDTSCESV---VTSGQHHLTPQQQH-----------QHPPRDA 167
           EN   R +    + +A        V   V S      P               Q PP D 
Sbjct: 227 ENARLRDEIDRISAIAAKYVGKPMVPFPVLSSPLAAAPGASAYDVFAGAASVLQAPPDDK 286

Query: 168 SPAGLLSIAEETLTEFLSKAT------GTAV---------EWVQM---PGMKPGPDSIGI 209
               ++ +A   + E L  A        T V         E+ +M   P    GP   G+
Sbjct: 287 QQGVVVELAVAAMEELLRMARLDDPLWATTVDQTLALDEEEYARMFIDPRGGLGPKQYGL 346

Query: 210 VAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSG-- 263
           V         A+R   +V + P  + EIL D   +     S+      + VL TG +G  
Sbjct: 347 VP-------EASRDATVVIMTPASLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGCY 399

Query: 264 --TIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 321
              ++++ ++   P+ L P R+ + +RY     DG+  V + SL+  Q           V
Sbjct: 400 DGALQVMSVEFQVPSPLVPTRESYFVRYCKRNADGAWAVVDVSLDGLQG----------V 449

Query: 322 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RH 380
           +    PSG LI+    G S +  V+H++++  SV  + +PL  S      +  +  L R 
Sbjct: 450 KCRRRPSGCLIQEAPNGYSKVTWVEHVEVDDRSVHNIYKPLVGSGLAFGARRWVGVLGRQ 509

Query: 381 LRQISQEVSQ--PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDG 433
             +++  ++   P+     +T    R + L+ L++R+   F   +       W+ L   G
Sbjct: 510 CERLASAMASNIPTSDIGVITSSEGRKSMLK-LAERMVASFCGGVTASVAHQWTTLSGSG 568

Query: 434 IDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH 490
            +DV V    S   P +  G+              VL A  S  L  VPP  +  FLR+ 
Sbjct: 569 AEDVRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VPPKRVFDFLRDE 613

Query: 491 --RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENM 548
             RSEW     D  S   +                 Q +  +A+  +H   + ++++ + 
Sbjct: 614 TSRSEW-----DILSNGGIV----------------QEMAHIANGRDHGNCVSLLRVNST 652

Query: 549 AHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPS 599
              + +M++     L + C+    +A G  + +++AP+D             D   ++PS
Sbjct: 653 NSNQSNMLI-----LQESCT----DASG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPS 701

Query: 600 GFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           GF I+P                      GP G   +  ++   G+  S++T+AFQ   + 
Sbjct: 702 GFAILP---------------------DGPAGTMHA--AAGATGTGGSLLTVAFQILVDS 738

Query: 660 HLQENVASMARQYVRGIIA-SVQRVALALSPSRFGSNAGLRPP 701
                ++  +   V  +IA +V+R+  A+      SN G  PP
Sbjct: 739 VPTAKLSLGSVATVNSLIACTVERIKTAVI-----SNGGASPP 776


>gi|224078678|ref|XP_002305602.1| predicted protein [Populus trichocarpa]
 gi|222848566|gb|EEE86113.1| predicted protein [Populus trichocarpa]
          Length = 725

 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 157/715 (21%), Positives = 277/715 (38%), Gaps = 172/715 (24%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 60  RYHRHTQRQIQDMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 115

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQV---------------------SQLVYENT 124
            E S     N  L A N+ L  EN+R ++ +                       L  EN 
Sbjct: 116 HERSE----NSILKAENERLRVENNRYKEALRNASCPNCGGPAALGEMSFDEQHLRIENV 171

Query: 125 FFRQQTQNAATLA--------------------------TTDTSCESVVTSGQHHLTPQQ 158
             R++    + +A                           ++   +S         T   
Sbjct: 172 RLREEIDRISGIAAKYVGKPLSSLSNLSPHLPSRSLDLGVSNFGAQSGFVGEMFGATDLL 231

Query: 159 QHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD--------SIGIV 210
           +    P +A  + ++ IA   + E +  A      W+Q        +        + GI 
Sbjct: 232 RSVTGPTEADKSMIVEIAVAAMEELMRIAQAGEPLWIQGENNTEMLNEEEYLRTFTRGIG 291

Query: 211 AISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD-CRSVE---VVNVLPTGSSGT-- 264
               G    A+R   +V ++   + EIL D   W    C  V     + VL TG +G   
Sbjct: 292 PKPLGMRSEASRESAVVIMNHVNLVEILMDANQWSTIFCGIVSRAMTLEVLSTGVAGNYN 351

Query: 265 --IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVR 322
             ++++  +   P+ + P R+ + +RY     DG+  V + SL++ +  PS+       +
Sbjct: 352 GALQVMTAEFQVPSPIVPTRENYFVRYCKQHTDGTWAVVDVSLDSLR--PSL-----LSK 404

Query: 323 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHL 381
               PSG LI+    G S +  V+H++++  SV  + RPL  S      K  +  L R  
Sbjct: 405 CRRRPSGCLIQELPNGYSKVVWVEHIEVDDRSVQNIYRPLVNSGLAFGAKRWVGTLDRQC 464

Query: 382 RQI--SQEVSQPS------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDG 433
            ++  S  ++ PS       T  GR+  ++  L++R+   F   +   T   W+ L + G
Sbjct: 465 ERLASSMAINIPSGDLCVITTAEGRK--SMLKLAERMVMSFCTGVGASTAHAWTTLSATG 522

Query: 434 IDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HR 491
            DDV V    S               P     ++ + A+     V    +  FLR+  HR
Sbjct: 523 SDDVRVMTRKSMDD------------PGRPPGIVLSAATSFWIPVQSKRMFDFLRDENHR 570

Query: 492 SEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQV--ILPLAHTIEHEEFLEVIKLENMA 549
           SEW     D  S                   GG+V  +  +A+  +    + ++++ +  
Sbjct: 571 SEW-----DILSN------------------GGEVQEMAHIANGRDPGNCVSLLRVNSAN 607

Query: 550 HYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFS---------DDAPIIPSG 600
             + +M++     L + C+    ++ G  + +++AP+D S           D   ++PSG
Sbjct: 608 SSQSNMLI-----LQESCT----DSTG--SYVIYAPVDISAMNIVLSGGDPDYVALLPSG 656

Query: 601 FRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
           F I+P   G  +         A  L+VG  G               S++T+AFQ 
Sbjct: 657 FAILPDGPGYGS---------AGILDVGSGG---------------SLLTVAFQI 687


>gi|226498004|ref|NP_001142912.1| uncharacterized protein LOC100275344 [Zea mays]
 gi|195611342|gb|ACG27501.1| hypothetical protein [Zea mays]
          Length = 698

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 229/556 (41%), Gaps = 101/556 (18%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           GG        +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WF
Sbjct: 10  GGSDAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWF 65

Query: 76  QNRRCREK---QRKEASRLQAVNRKLTAMNKLLME------------------------- 107
           QNRR + K   +R++   L+A N K+   N  + E                         
Sbjct: 66  QNRRTQMKAQHERQDNCFLRAENDKIRCENIAMREALRSVICPTCGGPPVADDYFDEQKL 125

Query: 108 --ENDRLQKQVSQLVYENTFFRQQ-------TQNAATLATTDTSCESVVT-SGQHHLTPQ 157
             EN RL++++ ++    + +  +        Q A ++++ D S   + + S    L   
Sbjct: 126 RMENARLKEELDRVSSLTSKYLGRPITQLPPAQAALSMSSLDLSVGGLGSPSLDLDLLSG 185

Query: 158 QQHQHPP-------RDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKP-GPDSIGI 209
               +PP        +     +  +A   + E +  A      WV+  G +    D+   
Sbjct: 186 GSSGYPPFHLPMSVSEMERPMMAEMATRAMDELIRMAQAGEHLWVKAGGREVLNVDTYDS 245

Query: 210 VAISHGCTGV--------AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVV 254
           V    G             +R  GLV +    + ++  D   W           R+V+V+
Sbjct: 246 VFAKPGAASFRGPDVHVEGSRDSGLVFMSAVGLVDMFMDSSKWTEFFPAIVSKARTVDVL 305

Query: 255 NVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSM 314
                G S ++ L+Y +L+  + + P R+F  LRY   +E G   + + S++  Q+    
Sbjct: 306 VNGMAGRSESLVLMYEELHVMSPVVPTREFCFLRYCRQIERGLWAIADISVDLQQHDARF 365

Query: 315 PQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL--RPLYESSTLIAQK 372
              P   R+  LPSG LI     G S +  V+HM++E   VP  L  R L  S   +   
Sbjct: 366 GAPPS--RSCRLPSGCLIADMADGSSKVTWVEHMEIED-RVPIHLLYRDLILSGAALGAH 422

Query: 373 TTMAALRHLRQIS----------QEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFT 422
             +AAL+   +            ++++   VT  G+R  ++  LSQR+   F  +L+   
Sbjct: 423 RWLAALQRACERCACLVPAGMPHRDIAVAGVTPEGKR--SMMKLSQRMVSSFCASLSASQ 480

Query: 423 DEGWSMLE--SDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
              W+ L   SD    VTVH ++ P +  GV              VL A  S+ L  VP 
Sbjct: 481 LHRWTTLSGPSDVGVRVTVHRSTDPGQPSGV--------------VLSAATSIWLP-VPC 525

Query: 481 AILLRFLR-EH-RSEW 494
             +  F+R EH RS+W
Sbjct: 526 DRVFAFVRDEHRRSQW 541


>gi|218200438|gb|EEC82865.1| hypothetical protein OsI_27729 [Oryza sativa Indica Group]
          Length = 785

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 150/653 (22%), Positives = 251/653 (38%), Gaps = 131/653 (20%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 127 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 182

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVS---------------------QLVYENT 124
            E       N  L A N+ L  EN R ++ ++                      L  EN 
Sbjct: 183 HERHE----NNALRAENEKLRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENA 238

Query: 125 FFRQQTQNAATLATTDTSCESVVTSGQH------HLTPQQQHQHPPRDASPAG------- 171
             R +    + +A       +   S  +      + +P      P   A   G       
Sbjct: 239 RLRDEIDRISAIAAKYVGKPAAAVSAAYPPLPPSNRSPLDHMGIPGAGADVFGADFDKPL 298

Query: 172 LLSIAEETLTEFLSKATGTAVEWV-QMPGMKPGPDSI------GIVAISHGCTGVAARAC 224
           ++ +A   + E +  A      W   + G   G +        G+   S      A+R  
Sbjct: 299 VIELAVAAMEELVRMAQLGEPLWAPALGGEALGEEEYARTFPRGLGPKSPELRSEASRET 358

Query: 225 GLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIELLYMQLYAPT 276
            +V ++   + E+L D   W     S+      + VL TG     +G ++L+  +   P+
Sbjct: 359 AVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAEFQMPS 418

Query: 277 TLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE-MLPSGYLIRPC 335
            L P R+   LRY     DG+  V + SL+  + G      P   R     PSG LI+  
Sbjct: 419 PLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEM 478

Query: 336 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLRQISQEVSQ 390
             G S +  V+H++ +   V  + +P+  S      +  +A L     R    ++  V+ 
Sbjct: 479 PNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVAS 538

Query: 391 PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS- 444
                   T  GRR  ++  L++R+   F   +   T   W+ L   G +DV V    S 
Sbjct: 539 SGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKSV 596

Query: 445 --PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSID 500
             P +  G+              VL A  S  L  VPP+ +  FLR+   RSEW     D
Sbjct: 597 DDPGRPPGI--------------VLNAATSFWLP-VPPSRVFDFLRDDSTRSEW-----D 636

Query: 501 AYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSD 560
             S   V                 Q +  +A+  +H   + ++++ N    + +M+    
Sbjct: 637 ILSNGGVV----------------QEMAHIANGRDHGNAVSLLRVNNANSNQSNML---- 676

Query: 561 IFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRII 604
             +LQ C     +A G  + +++AP+D             D   ++PSGF I+
Sbjct: 677 --ILQECC---TDATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 722


>gi|325260819|gb|ADZ04638.1| hypothetical protein [Oryza glaberrima]
          Length = 778

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 144/650 (22%), Positives = 248/650 (38%), Gaps = 125/650 (19%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 120 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 175

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVS---------------------QLVYENT 124
            E       N  L A N+ L  EN R ++ ++                      L  EN 
Sbjct: 176 HERHE----NNALRAENEKLRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENA 231

Query: 125 FFRQQTQNAATLATTDTSCESVVTSGQH------HLTPQQQHQHPPRDASPAG------- 171
             R +    + +A       +   S  +      + +P      P   A   G       
Sbjct: 232 RLRDEIDRISAIAAKYVGKPAAAVSAAYPPLPPSNRSPLDHMGIPGAGADVFGADFDKPL 291

Query: 172 LLSIAEETLTEFLSKATGTAVEWV-QMPGMKPGPDSI------GIVAISHGCTGVAARAC 224
           ++ +A   + E +  A      W   + G   G +        G+   S      A+R  
Sbjct: 292 VIELAVAAMEELIRMAQLGEPLWAPALGGEALGEEEYARTFPRGLGPKSPELRSEASRET 351

Query: 225 GLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIELLYMQLYAPT 276
            +V ++   + E+L D   W     S+      + VL TG     +G ++L+  +   P+
Sbjct: 352 AVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAEFQMPS 411

Query: 277 TLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE-MLPSGYLIRPC 335
            L P R+   LRY     DG+  V + SL+  + G      P   R     PSG LI+  
Sbjct: 412 PLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEM 471

Query: 336 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQPS-- 392
             G S +  V+H++ +   V  + +P+  S      +  +A L R   +++  ++     
Sbjct: 472 PNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVAS 531

Query: 393 -------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSP 445
                   T  GRR  ++  L++R+   F   +   T   W+ L   G +DV V    S 
Sbjct: 532 SGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKSV 589

Query: 446 SKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYS 503
                         P     ++   A+     VPP+ +  FLR+   RSEW     D  S
Sbjct: 590 DD------------PGRPPGIILNAATSFWLPVPPSRVFDFLRDDSTRSEW-----DILS 632

Query: 504 AAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFL 563
              V                 Q +  +A+  +H   + ++++ N    + +M+      +
Sbjct: 633 NGGVV----------------QEMAHIANGRDHGNAVSLLRVNNANSNQSNML------I 670

Query: 564 LQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRII 604
           LQ C     +A G  + +++AP+D             D   ++PSGF I+
Sbjct: 671 LQECC---TDATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 715


>gi|1173622|gb|AAB37230.1| homeobox protein [Phalaenopsis sp. SM9108]
          Length = 768

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 155/687 (22%), Positives = 267/687 (38%), Gaps = 151/687 (21%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           GGS D  D   +       +Y R+T  Q++ +E  + ECP P   +R+ L +E      +
Sbjct: 76  GGSGDEHDPNQRPR---KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKALSKEL----GL 128

Query: 67  EPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME---------------- 107
           EP Q+K WFQN+R + K    R+E S+L+A N KL   N    E                
Sbjct: 129 EPLQVKFWFQNKRTQMKTQHDRQENSQLRAENDKLRNENLRYKEALSNASCPNCGGPATL 188

Query: 108 ------------ENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVV-------- 147
                       EN RL++++ ++      +  +  N+  L +      S +        
Sbjct: 189 GEMSFDEHHLRIENARLREEIDRISGIAAKYVGKPMNSYPLLSPTLPSRSSLDLGVGGFG 248

Query: 148 ----TSGQHHLTPQQQHQH---PPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
               T G    +P +  +     P    P  ++ +A   + E +  A      W   PG+
Sbjct: 249 LHSPTMGGDMFSPAELLRSVAGQPEVDKPM-VIELAVAAMEELIRMAQLGEPLWTSSPGL 307

Query: 201 KPGPDSI-----------GIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCR 249
             G + +           GI     G    A+R   +V +    + EIL D   W     
Sbjct: 308 DGGNEILNEEEYVQNFPRGIGPKPFGLKSEASRETAVVIMSHVNLVEILMDANQWSTMFS 367

Query: 250 SV----EVVNVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVC 301
            +      + VL TG +G     ++++  +   P+ L P R+ + +RY     DG+  V 
Sbjct: 368 GIVSRGMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYFVRYCKQHPDGTWAVV 427

Query: 302 ERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 361
           + SL+      S+  +   +R    PSG LI+    G S +  V+H +++  SV  + +P
Sbjct: 428 DVSLD------SLRPSSLMMRCRRRPSGCLIQEMPNGYSKVIWVEHFEVDDRSVHSIYKP 481

Query: 362 LYESSTLIAQKTTMAAL-RHLRQISQEV--SQPS------VTGWGRRPAALRALSQRLSR 412
           L  S      K  ++ L R   +++  +  S PS       T  GR+  ++  L++R+  
Sbjct: 482 LVNSGIAFGAKRWVSTLDRQCERLASVMASSIPSGEIGVITTSEGRK--SMLKLAERMVL 539

Query: 413 GFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCA 469
            F   ++  T   W+ L   G +DV V    S   P +  G+              VL A
Sbjct: 540 SFCGGVSASTTHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGI--------------VLNA 585

Query: 470 KASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVI 527
             S  L  V P  +  FLR+   RSEW     D  S   V                 Q +
Sbjct: 586 ATSFWLP-VSPKRVFDFLRDESSRSEW-----DILSNGGVV----------------QEM 623

Query: 528 LPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID 587
             +A+  +H   + ++++ +    + +M++     L + C+    + V      ++AP+D
Sbjct: 624 AHIANGRDHGNCVSLLRVNSTNSNQSNMLI-----LQESCTDPTGSYV------IYAPVD 672

Query: 588 ---------ASFSDDAPIIPSGFRIIP 605
                        D   ++PSGF I+P
Sbjct: 673 VVAMNVVLNGGDPDYVALLPSGFAILP 699


>gi|222639874|gb|EEE68006.1| hypothetical protein OsJ_25963 [Oryza sativa Japonica Group]
          Length = 785

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 145/650 (22%), Positives = 247/650 (38%), Gaps = 125/650 (19%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 127 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 182

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVS---------------------QLVYENT 124
            E       N  L A N+ L  EN R ++ ++                      L  EN 
Sbjct: 183 HERHE----NNALRAENEKLRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENA 238

Query: 125 FFRQQTQNAATLATTDTSCESVVTSGQH------HLTPQQQHQHPPRDASPAG------- 171
             R +    + +A       +   S  +      + +P      P   A   G       
Sbjct: 239 RLRDEIDRISAIAAKYVGKPAAAVSAAYPPLPPSNRSPLDHMGIPGAGADVFGADFDKPL 298

Query: 172 LLSIAEETLTEFLSKATGTAVEWV-QMPGMKPGPDSI------GIVAISHGCTGVAARAC 224
           ++ +A   + E +  A      W   + G   G +        G+   S      A+R  
Sbjct: 299 VIELAVAAMEELVRMAQLGEPLWAPALGGEALGEEEYARTFPRGLGPKSPELRSEASRET 358

Query: 225 GLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIELLYMQLYAPT 276
            +V ++   + E+L D   W     S+      + VL TG     +G ++L+  +   P+
Sbjct: 359 AVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAEFQMPS 418

Query: 277 TLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE-MLPSGYLIRPC 335
            L P R+   LRY     DG+  V + SL+  + G      P   R     PSG LI+  
Sbjct: 419 PLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEM 478

Query: 336 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLRQISQEVSQ 390
             G S +  V+H++ +   V  + +P+  S      +  +A L     R    ++  V+ 
Sbjct: 479 PNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVAS 538

Query: 391 PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSP 445
                   T  GRR  ++  L++R+   F   +   T   W+ L   G +DV V    S 
Sbjct: 539 SGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKSV 596

Query: 446 SKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYS 503
                         P     ++   A+     VPP+ +  FLR+   RSEW     D  S
Sbjct: 597 DD------------PGRPPGIILNAATSFWLPVPPSRVFDFLRDDSTRSEW-----DILS 639

Query: 504 AAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFL 563
              V                 Q +  +A+  +H   + ++++ N    + +M+      +
Sbjct: 640 NGGVV----------------QEMAHIANGRDHGNAVSLLRVNNANSNQSNML------I 677

Query: 564 LQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRII 604
           LQ C     +A G  + +++AP+D             D   ++PSGF I+
Sbjct: 678 LQECC---TDATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 722


>gi|38636822|dbj|BAD03062.1| putative OCL5 protein [Oryza sativa Japonica Group]
 gi|46390804|dbj|BAD16310.1| putative OCL5 protein [Oryza sativa Japonica Group]
          Length = 828

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 145/650 (22%), Positives = 247/650 (38%), Gaps = 125/650 (19%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 170 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 225

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVS---------------------QLVYENT 124
            E       N  L A N+ L  EN R ++ ++                      L  EN 
Sbjct: 226 HERHE----NNALRAENEKLRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENA 281

Query: 125 FFRQQTQNAATLATTDTSCESVVTSGQH------HLTPQQQHQHPPRDASPAG------- 171
             R +    + +A       +   S  +      + +P      P   A   G       
Sbjct: 282 RLRDEIDRISAIAAKYVGKPAAAVSAAYPPLPPSNRSPLDHMGIPGAGADVFGADFDKPL 341

Query: 172 LLSIAEETLTEFLSKATGTAVEWV-QMPGMKPGPDSI------GIVAISHGCTGVAARAC 224
           ++ +A   + E +  A      W   + G   G +        G+   S      A+R  
Sbjct: 342 VIELAVAAMEELVRMAQLGEPLWAPALGGEALGEEEYARTFPRGLGPKSPELRSEASRET 401

Query: 225 GLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIELLYMQLYAPT 276
            +V ++   + E+L D   W     S+      + VL TG     +G ++L+  +   P+
Sbjct: 402 AVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAEFQMPS 461

Query: 277 TLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE-MLPSGYLIRPC 335
            L P R+   LRY     DG+  V + SL+  + G      P   R     PSG LI+  
Sbjct: 462 PLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEM 521

Query: 336 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLRQISQEVSQ 390
             G S +  V+H++ +   V  + +P+  S      +  +A L     R    ++  V+ 
Sbjct: 522 PNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVAS 581

Query: 391 PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSP 445
                   T  GRR  ++  L++R+   F   +   T   W+ L   G +DV V    S 
Sbjct: 582 SGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKSV 639

Query: 446 SKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYS 503
                         P     ++   A+     VPP+ +  FLR+   RSEW     D  S
Sbjct: 640 DD------------PGRPPGIILNAATSFWLPVPPSRVFDFLRDDSTRSEW-----DILS 682

Query: 504 AAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFL 563
              V                 Q +  +A+  +H   + ++++ N    + +M+      +
Sbjct: 683 NGGVV----------------QEMAHIANGRDHGNAVSLLRVNNANSNQSNML------I 720

Query: 564 LQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRII 604
           LQ C     +A G  + +++AP+D             D   ++PSGF I+
Sbjct: 721 LQECC---TDATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 765


>gi|302763529|ref|XP_002965186.1| hypothetical protein SELMODRAFT_230527 [Selaginella moellendorffii]
 gi|300167419|gb|EFJ34024.1| hypothetical protein SELMODRAFT_230527 [Selaginella moellendorffii]
          Length = 745

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 174/797 (21%), Positives = 304/797 (38%), Gaps = 196/797 (24%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           SG       SG ++      +Y R+T  Q++ +E L+ ECP P   +RQ+L RE      
Sbjct: 30  SGSENMGNASGDEQEPPRKKRYHRHTARQIQEMESLFKECPHPDDKQRQELSREL----G 85

Query: 66  IEPKQIKVWFQNRRCREKQ----------RKEASRLQAVN-------------------- 95
           +EP+Q+K WFQNRR + K           R E  +L+A N                    
Sbjct: 86  LEPRQVKFWFQNRRTQLKAQQERAENNVLRHEVEKLRAENITMREAIRNASCPNCGGPAT 145

Query: 96  --------RKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVV 147
                   + L   N  L +E DR+    ++L +  +     +Q A   + +  +     
Sbjct: 146 LREMSFEEQHLRIENACLKDELDRVSAVAAKL-FGRSVPPMVSQQAPQFSGSSLNLSIQG 204

Query: 148 TSGQHHLTPQQQ----HQHPPR--------------------DASPAGLLSIAEETLTEF 183
            +G + ++P  Q       PP                     D     +L +A   + E 
Sbjct: 205 AAGSNPMSPPAQVAGLLSAPPSGVEELSNANNLNTNKSVVLSDVEKNSVLDLAVMAMDEL 264

Query: 184 LSKATGTAVEWVQMPGMKPGPDSIGIV---------------AISHGCTGVAARACGLVG 228
           +  A   +  W+      P PD+   V               +  +G    A R  GLV 
Sbjct: 265 VQLAQPDSPVWI------PSPDASKEVLNYDEYVRQFPKFVESKQYGFKTDATRDDGLVM 318

Query: 229 LDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPA 281
           ++   + E+L D   W            ++EV++  P   SGT++L+Y ++ A + L   
Sbjct: 319 MNAASLVEVLMDPAKWMEMFCTNVSKALTLEVISCAPGSLSGTLQLMYAEIQALSPLMQT 378

Query: 282 RDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIR-------P 334
           R+ + LRY    +D +  V + S++     PS P + H  R+   PSG LI+        
Sbjct: 379 REVYFLRYCKQHQDSTWAVVDVSVDGLHGTPS-PASLHCRRS---PSGMLIQDMPDSIHD 434

Query: 335 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-------ISQE 387
              G S + +V+HM+ +   V ++ + L  S      +  +A L+  RQ       +   
Sbjct: 435 MPNGCSKVVVVEHMEYDDQPVHQLFKSLVSSGGAFGARKWLATLQ--RQCEALTCYLPGL 492

Query: 388 VSQPSVTGWGRRPA--ALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSP 445
            S   +      PA  +L  LSQR++  F   + G     W+ L     DD+ V    S 
Sbjct: 493 ASAREIGVIPNSPARQSLLKLSQRMTTNFCAGV-GAPSSQWTTLSGSVHDDIRVMTRKSV 551

Query: 446 SKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR-EH-RSEWADSSIDAYS 503
                         P   + ++ + A+ L   + PA +  +LR EH RSEW +S +    
Sbjct: 552 DN------------PGEPHGIVLSAATTLWLPLAPARVFDYLRSEHLRSEWDNSGM-VQE 598

Query: 504 AAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFL 563
            A +  G  +         G  V L             +  L    +  ++ ++    FL
Sbjct: 599 VARIAKGQAT---------GNDVSL-----------FRIDALNQTLNANQNQML----FL 634

Query: 564 LQLCSGVDENAVGNCAELVFAPIDASFSD---------DAPIIPSGFRIIPLDSGKDTPS 614
            + C+    +A G+   +V+AP++ +  +            ++PSGF I+P     D   
Sbjct: 635 QESCT----DASGSL--VVYAPVELTMINMMIQGGDPAHVAVLPSGFVILP-----DGSE 683

Query: 615 PNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVR 674
           P+ T  +                   Q  +T +++T+A Q          ++  +   + 
Sbjct: 684 PHSTTSI------------------LQNDATGTLLTVAVQILISTLPSAKLSLDSIVAIN 725

Query: 675 GIIA-SVQRVALALSPS 690
            +I+ +VQ+V  AL+PS
Sbjct: 726 TLISNTVQKVKGALTPS 742


>gi|213950363|gb|ACJ54446.1| GL2a [Brassica oleracea]
          Length = 750

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 159/682 (23%), Positives = 274/682 (40%), Gaps = 123/682 (18%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 99  YHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 154

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV--------------SQLVYENTFFRQQ 129
           +R E S L+A   KL   NK + E   +                     L  ENT  + +
Sbjct: 155 ERHENSLLKAELEKLREENKAMRESFSKANSSSCPNCGGGGGGGGSPDDLHLENTKLKAE 214

Query: 130 TQNA-ATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKAT 188
                A L  T    ++  +  QH      +          + ++ IA     E    AT
Sbjct: 215 LDKLRAALGRTPYPLQASCSDDQHRRVGSLELYTGVFALEKSRIVEIANRATLEVQKMAT 274

Query: 189 GTAVEWVQMPGMKPGPDSIGI-----------VAISHGCTGV-AARACGLVGLDPTRVAE 236
                W++   ++ G + +              +  HG   + A+R  G+V +D  ++A+
Sbjct: 275 SGEPLWLR--SLETGREILNYDEYLKEFPQAQASSFHGRKTIEASRDVGIVFMDAHKLAQ 332

Query: 237 ILKDRPSWYR--DCRSVEVVNVL-------PTGSSGTIELLYMQLYAPTTLAPARDFWLL 287
              D   W     C   + V V        P+   G I+L++ ++   T + P R+ + +
Sbjct: 333 SFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFV 392

Query: 288 RYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDH 347
           R    L     V+ + S++  ++  S  +    +R    PSG +I     G S +  V+H
Sbjct: 393 RSCRQLSPEKWVIVDVSVSVEEDNNSTEKEGSLLRCRKRPSGCIIEDTSNGHSKVTWVEH 452

Query: 348 MDLEPWSVPEVLRPLYESSTLIAQKTTMAALR-HLRQIS--QEVSQPS-----VTGWGRR 399
           +DL   +V  + R    +      +  +A L+ H  ++      + P+     VT    R
Sbjct: 453 LDLSASTVQPLFRSFVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSLGVTTLAGR 512

Query: 400 PAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYV 456
            + L+ ++QR+++ F  A+   +   W+ + +    D+ V    +   P +  GV     
Sbjct: 513 KSVLK-MAQRMTQSFYRAIAASSYHQWNKITTKTGQDMRVSSRKNLHDPGEPTGV----- 566

Query: 457 NGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSL 514
                    ++CA +S+ L  V P +L  F R+   R EW     DA S  A      SL
Sbjct: 567 ---------IVCASSSLWL-PVSPTLLFDFFRDETRRHEW-----DALSNGAHVQSIVSL 611

Query: 515 PVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM--PSDIFLLQLCSGVDE 572
              +  + G  V +    T++  E    +  +N  +  E +++  P DI           
Sbjct: 612 --SKGQDRGNSVSI---QTVKSREKSTWVLQDNCTNSYESVVVYAPVDI----------- 655

Query: 573 NAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGN 632
               N  +LV A  D S   +  I+P GF IIP   G ++    R L ++SA E      
Sbjct: 656 ----NTTQLVIAGHDPS---NIQILPCGFSIIP--DGVES----RQLVISSAQE------ 696

Query: 633 KASGDSSTQCGSTKSVITIAFQ 654
               D +TQ G   S++T+A Q
Sbjct: 697 ----DRNTQGG---SLLTLALQ 711


>gi|187611405|sp|A2YR02.1|ROC7_ORYSI RecName: Full=Homeobox-leucine zipper protein ROC7; AltName:
           Full=GLABRA 2-like homeobox protein 7; AltName:
           Full=HD-ZIP protein ROC7; AltName: Full=Homeodomain
           transcription factor ROC7; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 7
          Length = 749

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 149/653 (22%), Positives = 252/653 (38%), Gaps = 131/653 (20%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 91  RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 146

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVS---------------------QLVYENT 124
            E       N  L A N+ L  EN R ++ ++                      L  EN 
Sbjct: 147 HERHE----NNALRAENEKLRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENA 202

Query: 125 FFRQQTQNAATLATTDTSCESVVTSGQH------HLTPQQQHQHPPRDASPAG------- 171
             R +    + +A       +   S  +      + +P      P   A   G       
Sbjct: 203 RLRDEIDRISAIAAKYVGKPAAAVSAAYPPLPPSNRSPLDHMGIPGAGADVFGADFDKPL 262

Query: 172 LLSIAEETLTEFLSKATGTAVEWV-QMPGMKPGPDSI------GIVAISHGCTGVAARAC 224
           ++ +A   + E +  A      W   + G   G +        G+   S      A+R  
Sbjct: 263 VIELAVAAMEELVRMAQLGEPLWAPALGGEALGEEEYARTFPRGLGPKSPELRSEASRET 322

Query: 225 GLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIELLYMQLYAPT 276
            +V ++   + E+L D   W     S+      + VL TG     +G ++L+  +   P+
Sbjct: 323 AVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAEFQMPS 382

Query: 277 TLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE-MLPSGYLIRPC 335
            L P R+   LRY     DG+  V + SL+  + G      P   R     PSG LI+  
Sbjct: 383 PLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEM 442

Query: 336 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQPS-- 392
             G S +  V+H++ +   V  + +P+  S      +  +A L R   +++  ++     
Sbjct: 443 PNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVAS 502

Query: 393 -------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS- 444
                   T  GRR  ++  L++R+   F   +   T   W+ L   G +DV V    S 
Sbjct: 503 SGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKSV 560

Query: 445 --PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSID 500
             P +  G+              VL A  S  L  VPP+ +  FLR+   RSEW     D
Sbjct: 561 DDPGRPPGI--------------VLNAATSFWLP-VPPSRVFDFLRDDSTRSEW-----D 600

Query: 501 AYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSD 560
             S   V                 Q +  +A+  +H   + ++++ N    + +M+    
Sbjct: 601 ILSNGGVV----------------QEMAHIANGRDHGNAVSLLRVNNANSNQSNML---- 640

Query: 561 IFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRII 604
             +LQ C     +A G  + +++AP+D             D   ++PSGF I+
Sbjct: 641 --ILQECC---TDATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 686


>gi|302757697|ref|XP_002962272.1| hypothetical protein SELMODRAFT_140884 [Selaginella moellendorffii]
 gi|109729918|tpg|DAA05773.1| TPA_inf: class IV HD-Zip protein HDZ43 [Selaginella moellendorffii]
 gi|300170931|gb|EFJ37532.1| hypothetical protein SELMODRAFT_140884 [Selaginella moellendorffii]
          Length = 745

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 173/797 (21%), Positives = 301/797 (37%), Gaps = 196/797 (24%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           SG       SG ++      +Y R+T  Q++ +E L+ ECP P   +RQ+L RE      
Sbjct: 30  SGSENMGNASGDEQEPPRKKRYHRHTARQIQEMESLFKECPHPDDKQRQELSREL----G 85

Query: 66  IEPKQIKVWFQNRRCREKQ----------RKEASRLQAVN-------------------- 95
           +EP+Q+K WFQNRR + K           R E  +L+A N                    
Sbjct: 86  LEPRQVKFWFQNRRTQLKAQQERAENNVLRHEVEKLRAENITMREAIRNASCPNCGGPAT 145

Query: 96  --------RKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVV 147
                   + L   N  L +E DR+    ++L +  +     +Q A   + +  +     
Sbjct: 146 LREMSFEEQHLRIENACLKDELDRVSAVAAKL-FGRSVPPMVSQQAPQFSGSSLNLSIQG 204

Query: 148 TSGQHHLTPQQQ----HQHPPR--------------------DASPAGLLSIAEETLTEF 183
            +G + ++P  Q       PP                     D     +L +A   + E 
Sbjct: 205 AAGSNPMSPPAQVAGLLSAPPSGVEELSNSNNLSTNKSVVLSDVEKNSVLDLAVMAMDEL 264

Query: 184 LSKATGTAVEWVQMPGMKPGPDSIGIV---------------AISHGCTGVAARACGLVG 228
           +  A   +  W+      P PD+   V               +  +G    A R  GLV 
Sbjct: 265 VQLAQPDSPVWI------PSPDASKEVLNYDEYVRQFPKFVESKQYGFKTDATRDDGLVM 318

Query: 229 LDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPA 281
           ++   + E+L D   W            ++EV++  P   SGT++L+Y ++ A + L   
Sbjct: 319 MNAASLVEVLMDPAKWMEMFCTNVSKALTLEVISCAPGSLSGTLQLMYAEIQALSPLMQT 378

Query: 282 RDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIR-------P 334
           R+ + LRY    +D +  V + S++     PS P + H  R+   PSG LI+        
Sbjct: 379 REVYFLRYCKQHQDSTWAVVDVSVDGLHGTPS-PASLHCRRS---PSGMLIQDMPDSIHD 434

Query: 335 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-------ISQE 387
              G S + +V+HM+ +   V ++ + L  S      +  +A L+  RQ       +   
Sbjct: 435 MPNGCSKVVVVEHMEYDDQPVHQLFKSLVSSGGAFGARKWLATLQ--RQCEALTCYLPGL 492

Query: 388 VSQPSVTGWGRRPA--ALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSP 445
            S   +      PA  +L  LSQR++  F   + G     W+ L     DD+ V    S 
Sbjct: 493 ASAREIGVIPNSPARQSLLKLSQRMTTNFCAGV-GAPSSQWTTLSGSVHDDIRVMTRKSV 551

Query: 446 SKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR-EH-RSEWADSSIDAYS 503
                         P   + ++ + A+ L   + PA +  +LR EH RSEW +S +    
Sbjct: 552 DN------------PGEPHGIVLSAATTLWLPLAPARVFDYLRSEHLRSEWDNSGM-VQE 598

Query: 504 AAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFL 563
            A +  G  +         G  V L             +  L    +  ++ ++    FL
Sbjct: 599 VARIAKGQAT---------GNDVSL-----------FRIDALNQTLNANQNQML----FL 634

Query: 564 LQLCSGVDENAVGNCAELVFAPIDASFSD---------DAPIIPSGFRIIPLDSGKDTPS 614
            + C+    + V      V+AP++ +  +            ++PSGF I+P     D   
Sbjct: 635 QESCTDTSGSLV------VYAPVELTMINMMIQGGDPAHVAVLPSGFVILP-----DGSE 683

Query: 615 PNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVR 674
           P+ T  +                   Q  +T +++T+A Q          ++  +   + 
Sbjct: 684 PHSTTSI------------------LQNDATGTLLTVAVQILISTLPSAKLSLDSIVAIN 725

Query: 675 GIIA-SVQRVALALSPS 690
            +I+ +VQ+V  AL+PS
Sbjct: 726 TLISNTVQKVKGALTPS 742


>gi|187611406|sp|A3BPF2.1|ROC7_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC7; AltName:
           Full=GLABRA 2-like homeobox protein 7; AltName:
           Full=HD-ZIP protein ROC7; AltName: Full=Homeodomain
           transcription factor ROC7; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 7
          Length = 749

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 144/650 (22%), Positives = 248/650 (38%), Gaps = 125/650 (19%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 91  RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 146

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVS---------------------QLVYENT 124
            E       N  L A N+ L  EN R ++ ++                      L  EN 
Sbjct: 147 HERHE----NNALRAENEKLRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENA 202

Query: 125 FFRQQTQNAATLATTDTSCESVVTSGQH------HLTPQQQHQHPPRDASPAG------- 171
             R +    + +A       +   S  +      + +P      P   A   G       
Sbjct: 203 RLRDEIDRISAIAAKYVGKPAAAVSAAYPPLPPSNRSPLDHMGIPGAGADVFGADFDKPL 262

Query: 172 LLSIAEETLTEFLSKATGTAVEWV-QMPGMKPGPDSI------GIVAISHGCTGVAARAC 224
           ++ +A   + E +  A      W   + G   G +        G+   S      A+R  
Sbjct: 263 VIELAVAAMEELVRMAQLGEPLWAPALGGEALGEEEYARTFPRGLGPKSPELRSEASRET 322

Query: 225 GLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIELLYMQLYAPT 276
            +V ++   + E+L D   W     S+      + VL TG     +G ++L+  +   P+
Sbjct: 323 AVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLMSAEFQMPS 382

Query: 277 TLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE-MLPSGYLIRPC 335
            L P R+   LRY     DG+  V + SL+  + G      P   R     PSG LI+  
Sbjct: 383 PLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEM 442

Query: 336 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQPS-- 392
             G S +  V+H++ +   V  + +P+  S      +  +A L R   +++  ++     
Sbjct: 443 PNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVAS 502

Query: 393 -------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSP 445
                   T  GRR  ++  L++R+   F   +   T   W+ L   G +DV V    S 
Sbjct: 503 SGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKSV 560

Query: 446 SKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYS 503
                         P     ++   A+     VPP+ +  FLR+   RSEW     D  S
Sbjct: 561 DD------------PGRPPGIILNAATSFWLPVPPSRVFDFLRDDSTRSEW-----DILS 603

Query: 504 AAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFL 563
              V                 Q +  +A+  +H   + ++++ N    + +M+      +
Sbjct: 604 NGGVV----------------QEMAHIANGRDHGNAVSLLRVNNANSNQSNML------I 641

Query: 564 LQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRII 604
           LQ C     +A G  + +++AP+D             D   ++PSGF I+
Sbjct: 642 LQECC---TDATG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 686


>gi|449453486|ref|XP_004144488.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
          Length = 761

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 157/750 (20%), Positives = 288/750 (38%), Gaps = 166/750 (22%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 84
           +Y R+T  Q++ +E  + ECP P   +R++L RE     N+EP Q+K WFQN+R + K  
Sbjct: 87  RYHRHTQHQIQQMEAFFKECPHPDDKQRKELSREL----NLEPLQVKFWFQNKRTQMKTH 142

Query: 85  ---------RKEASRLQAVNRKL---------------TAMNKL------LMEENDRLQK 114
                    R E  +L+A N +                TA+ ++      L  EN RL++
Sbjct: 143 HERHENTQLRTENEKLRADNMRYREALSNATCPNCGGPTAIGEMSFDEHHLRLENARLRE 202

Query: 115 QVSQL-VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQ------------ 161
           ++ ++      +  +   N   L+T   S    +  G +                     
Sbjct: 203 EIDRISAIAAKYVGKPVSNYPLLSTPIPSRPLELGMGSYGGHDLGLGPGGGDMFGAADLL 262

Query: 162 ---HPPRDASPAGLLSIAEETLTE-----------FLSKATGTAVEWVQMPGMKPGPDSI 207
                P +A    ++ +A   + E           +++   G+  E  +   ++  P  I
Sbjct: 263 RTISAPSEADKPVIIELAVAAMEELVRMAQMGEPLWMTGVDGSTNELNEEEYVRSFPRGI 322

Query: 208 GIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSG 263
           G       C   A+RA  +V ++   + E+L D   W      +      + VL TG +G
Sbjct: 323 GPKPSGFSCE--ASRATAVVIMNHISLVEMLMDVNQWSTTFTGIVSRAMTLEVLSTGVAG 380

Query: 264 T----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
                ++++  +L  P+ L P R+ + +RY     +G+  V + SL+  +  P++     
Sbjct: 381 NYNGALQVMTSELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDTLRPAPAL----- 435

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL- 378
             R    PSG LI+    G S +  V+H++++   V  +   L  S      K  +A L 
Sbjct: 436 --RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLD 493

Query: 379 RHLRQISQEVSQP--------SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
           R   +++  ++           +T    R + L+ L++R+   F   ++  T   W+ L 
Sbjct: 494 RQCERLASAMATSIIPNGDAGVITNQEGRKSMLK-LAERMVMSFCGGVSASTTHTWTTLS 552

Query: 431 SDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH 490
             G DDV V    S               P   + ++ + A+     +PP  +  FLR+ 
Sbjct: 553 GTGADDVRVMTRKSVDD------------PGRPSGIVLSAATSFWLPLPPNRVFHFLRDE 600

Query: 491 --RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENM 548
             R+EW     D  S                    G V+  +AH     +    + L  +
Sbjct: 601 NSRNEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRV 636

Query: 549 AHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPS 599
                     S++ +LQ  S  D+ A    + +++AP+D             D   ++PS
Sbjct: 637 NSANSSQ---SNMLILQESS-TDQTA----SFVIYAPVDIVSINVVLNGGDPDYVALLPS 688

Query: 600 GFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           GF I+P                      G T +    +   + GS  S++T+AFQ   + 
Sbjct: 689 GFAILP---------------------DGSTASSGGANGVGEHGSGGSLLTVAFQILVDS 727

Query: 660 HLQENVASMARQYVRGIIA-SVQRVALALS 688
                ++  +   V  +IA +V+R+  +LS
Sbjct: 728 VPTAKLSLGSVATVNNLIACTVERIKASLS 757


>gi|345195196|tpg|DAA34963.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 692

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 142/567 (25%), Positives = 228/567 (40%), Gaps = 123/567 (21%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           GG        +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WF
Sbjct: 10  GGSDAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWF 65

Query: 76  QNRRCREK---QRKEASRLQAVNRKLTAMNKLLME------------------------- 107
           QNRR + K   +R++   L+A N K+   N  + E                         
Sbjct: 66  QNRRTQMKAQHERQDNCFLRAENDKIRCENIAMQEALRNVICPTCGGPPVADDHFDEQKL 125

Query: 108 --ENDRLQKQVSQL--VYENTFFRQQTQ----NAATLATTDTSCESVVT-SGQHHLTPQQ 158
             EN RL++++ ++  +      R  TQ     A ++++ D S   +   S    L    
Sbjct: 126 RMENARLKEELDRVSSLTSKYLGRPITQLPSAQALSMSSLDLSVGGLGGPSLDLDLLSGG 185

Query: 159 QHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE--------WVQMPG----------- 199
              +PP    P  +  +    + E  ++A    +         WV+  G           
Sbjct: 186 SSGYPPFHLLPMAVSEMERPMMAEMATRAMDELIRMAQAGEHLWVKTGGREVLNVDTYDS 245

Query: 200 --MKP-----GPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR------ 246
              KP     GPD    V +        +R  GLV +    + ++  D   W        
Sbjct: 246 IFAKPDGSFRGPD----VHVE------GSRETGLVFMSAIGLVDMFMDSSKWTELFPAIV 295

Query: 247 -DCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSL 305
              R+V+V+     G S ++ L+Y +L+  + + P R+F  LRY   +E G   + + S+
Sbjct: 296 SKARTVDVLVNGMGGRSESLLLMYEELHVMSPVVPTREFCFLRYCRQIEHGLWAIADISV 355

Query: 306 NNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL--RPLY 363
           +  Q        P   R+  LPSG LI     G S +  V+HM++E   VP  L  R L 
Sbjct: 356 DQQQRDARFGAPPS--RSCRLPSGCLIADMADGSSKVTWVEHMEIED-RVPIHLLYRDLV 412

Query: 364 ESSTLIAQKTTMAALRHLRQIS-----------QEVSQPSVTGWGRRPAALRALSQRLSR 412
            S         +AAL+   +             ++++   VT  G+R  ++  LSQR+  
Sbjct: 413 LSGAAFGAHRWLAALQRACERCACLATAGIMPHRDIAAAGVTPEGKR--SMMKLSQRMVN 470

Query: 413 GFNEALNGFTDEGWSMLESDGIDD----VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLC 468
            F  +L+      W+ L   G +D    V VH ++ P +  GV LS      S+   V C
Sbjct: 471 SFCASLSASQLHRWTTLS--GPNDVGVRVMVHRSTDPGQPSGVVLSAAT---SIWLPVPC 525

Query: 469 AKASMLLQDVPPAILLRFLREH-RSEW 494
            +A   ++D           EH RS+W
Sbjct: 526 DRAFAFVRD-----------EHTRSQW 541


>gi|356524732|ref|XP_003530982.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 721

 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 130/564 (23%), Positives = 220/564 (39%), Gaps = 127/564 (22%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 27  RYHRHTANQIQRLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 82

Query: 84  -QRKEASRLQAVNRKLTAMNKLLMEE--------------NDRLQKQVSQLVYENTFFRQ 128
            +R +   L+A N K+   N  + E               ND       +L  EN   ++
Sbjct: 83  HERADNCALRADNDKIRCENIAIREALKNVICPSCGAPPLNDDCYFDDQKLRLENAHLKE 142

Query: 129 QTQNAATLA--------------------TTDTSCESVVTSGQHHLTPQQQH-------- 160
           +    +++A                    + D S  S    G     P   +        
Sbjct: 143 ELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMASYGNQGMVGPAPSSLNLDLLPAAG 202

Query: 161 -------QHPP--RDASPAGLLSIAEETLTEFLSKATGTAVEWVQ--------------- 196
                   HPP   D   + +  IA   + EFL         W++               
Sbjct: 203 TSSSSMPYHPPCLSDMDKSLMSDIASNAMEEFLRLVQTNEPLWLKSNVDARDVLSCDAYE 262

Query: 197 ----MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR------ 246
                P  +P   ++ I A         +R  G+V ++   + ++  D   W +      
Sbjct: 263 RMFHKPNTRPKNPNVRIEA---------SRDSGVVLMNTLALVDMFMDPNKWIQLFPTIV 313

Query: 247 -DCRSVEVVNVLPTGS-SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERS 304
              R+++V++    GS SG+++L+Y +L   + L   R+F+ LRY   +E G+  V + S
Sbjct: 314 SVARTIQVISSGMMGSCSGSLQLMYQELQVLSPLVSTREFYFLRYCQQIEQGTWAVMDVS 373

Query: 305 LNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL--RPL 362
            +  Q+    PQ     R+   PSG LI+    G S I  V+H+++E  ++P  L    +
Sbjct: 374 YDFPQDSHYAPQ----FRSHRCPSGCLIQDMPDGHSKITWVEHVEIEDKTLPHRLYRNLI 429

Query: 363 YESSTLIAQK--TTMAALRHLRQISQEVSQPSVTGWG---RRPAALRA---LSQRLSRGF 414
           Y      A++  TT+  +          S P+    G     P   R+   L+QR+   F
Sbjct: 430 YSGMAFGAERWLTTLQRMCERLTYLMATSNPTRDNLGGVISSPEGKRSMMKLAQRMVTNF 489

Query: 415 NEALNGFTDEGWSMLE--SDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKAS 472
              ++  +   W+ L   ++ +  VTVH +S P +  GV LS                A+
Sbjct: 490 CANISTSSGHRWTTLSGLNEIVVRVTVHKSSDPGQPNGVVLS---------------AAT 534

Query: 473 MLLQDVPPAILLRFLREH--RSEW 494
            +    PP  +  F ++   R +W
Sbjct: 535 TIWLPTPPHAVFNFFKDENKRPQW 558


>gi|242056677|ref|XP_002457484.1| hypothetical protein SORBIDRAFT_03g008090 [Sorghum bicolor]
 gi|241929459|gb|EES02604.1| hypothetical protein SORBIDRAFT_03g008090 [Sorghum bicolor]
          Length = 815

 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 166/724 (22%), Positives = 278/724 (38%), Gaps = 175/724 (24%)

Query: 3   AVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           A+S+GG+ D  D+          +Y R+TP+Q++ LE L+ ECP P   +R +L +    
Sbjct: 86  AMSAGGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL-- 143

Query: 63  LSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME------------ 107
              ++P+Q+K WFQNRR + K   +R E + L+  N KL A N  + E            
Sbjct: 144 --GLDPRQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMAIREAMRSPMCGSCGS 201

Query: 108 ----------------ENDRLQKQVSQLVYENTFFRQQ----------TQNAATLATTDT 141
                           EN RL+ ++S++    T F  +           Q   +L    +
Sbjct: 202 PAMLGEVSLEEQHLCIENARLKDELSRVYALATKFLGKPMSILSAGTMLQPNLSLPMPSS 261

Query: 142 SCESVVTSGQHHL---------------------TPQQQHQHPPR--DASPAGLLSIAEE 178
           S E  V  G   L                     +P      P R   ++P  ++ I   
Sbjct: 262 SLELAVGGGLRGLGSIPSAATMPGSMGDFAGGVSSPLGTVITPARTTGSAPPPMVGIDRS 321

Query: 179 TLTEFLSKATGTAVEWVQ------MPGMKPGPDS--IGIVAISHG---CTGV-------- 219
            L E    A    V+  Q      +P +   P+   +     +H    C GV        
Sbjct: 322 MLLELAISAMDELVKLAQIDEPLWLPSLNGSPNKELLNFEEYAHSFLPCVGVKPVGYVSE 381

Query: 220 AARACGLVGLDPT-RVAEILKDRPSWYRDCRSV---------EVVNVLPTGSSGTIELLY 269
           A+R  GLV  D +  + E L D   W  D  S          EV + +    +G + L+ 
Sbjct: 382 ASRESGLVIFDNSLALVETLMDERRW-SDMFSCMIAKATVLEEVTSGIAGSRNGGLLLMK 440

Query: 270 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN---TQNGPSMPQAPHFVRAEML 326
            +L   + L P R+   LR+   L +G+  V + S++     QN  +   A + +R   L
Sbjct: 441 AELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDQNSATASNAGN-IRCRRL 499

Query: 327 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQ 386
           PSG +++    G   +  V+H + +  SV ++ RPL  S      +  +A L+   +   
Sbjct: 500 PSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLAMLQRQCECLA 559

Query: 387 EVSQPS---------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI--- 434
            +  P          +T  G+R  ++  L++R++  F   ++  +   WS L  DG    
Sbjct: 560 ILMSPDTVSANDSSVITQEGKR--SMLKLARRMTENFCAGVSASSAREWSKL--DGAAGS 615

Query: 435 --DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH-- 490
             +DV V    S  +            P     V+ + A+ +   V P  L  FLR+   
Sbjct: 616 IGEDVRVMARKSVDE------------PGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQL 663

Query: 491 RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAH 550
           R+EW     D  S      GP             Q +  +A   EH   + +++   M+ 
Sbjct: 664 RAEW-----DILS----NGGPM------------QEMANIAKGQEHGNSVSLLRASAMSA 702

Query: 551 YREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGF 601
            +  M++     L + C+    + V      V+AP+D            S    ++PSGF
Sbjct: 703 NQSSMLI-----LQETCTDASGSMV------VYAPVDIPAMQLVMNGGDSTYVALLPSGF 751

Query: 602 RIIP 605
            I+P
Sbjct: 752 AILP 755


>gi|224116084|ref|XP_002317205.1| predicted protein [Populus trichocarpa]
 gi|222860270|gb|EEE97817.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 166/735 (22%), Positives = 282/735 (38%), Gaps = 180/735 (24%)

Query: 9   SRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           S D +D  GQ+      +Y R+T  Q++ +E  + ECP P   +R++L RE      ++P
Sbjct: 40  SGDDQDPSGQRP--KKKRYHRHTQRQIQEMEAFFQECPHPDDKQRKELSREL----GLDP 93

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS----------- 117
            Q+K WFQN+R + K + E S     N  L A N+ L  EN+R ++ +S           
Sbjct: 94  LQVKFWFQNKRTQMKAQHERSE----NSILKAENEKLRMENNRYKEALSSASCPNCGGPA 149

Query: 118 ----------QLVYENTFFRQQTQNAATLATTDTSCE-SVVTSGQHHLTPQ-------QQ 159
                      L  EN   R++    + +A        S +++  HHL  +         
Sbjct: 150 ALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPLSSLSNLSHHLPSRSLDLGVSNY 209

Query: 160 HQHP------------------PRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 201
             H                   P +A    ++ +A   + E +  A      W+Q     
Sbjct: 210 GAHSGFVGEMFGATALLGAVTGPTEADKPMIVEVAVAAMEELMRMAQAGEPLWIQGENNT 269

Query: 202 PGPD--------SIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD-CRSVE 252
              +        + GI     G    A+R   +V +    + EIL D   W    C  V 
Sbjct: 270 EVLNEEEYLRTFTRGIGPRPLGMRSEASRESAVVIMSHVNLVEILMDANQWSTIFCGIVS 329

Query: 253 ---VVNVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSL 305
               + VL TG +G     ++++  +   P+ L P R+ + +RY     D +  V + SL
Sbjct: 330 RAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHTDATWAVVDVSL 389

Query: 306 NNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYES 365
           ++    PS+       +     SG LI+    G S +  V+H +++  SV  + RPL  S
Sbjct: 390 DSL--CPSL-----MSKCRRRSSGCLIQELPNGYSNVVWVEHTEVDDRSVHNIYRPLVNS 442

Query: 366 STLIAQKTTMAAL-RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNE 416
                 K  +  L R   +++  ++    TG         GR+  ++  L++R+   F  
Sbjct: 443 GLAFGAKRWVGTLDRQCERLASSMAINIPTGDLCVITTPEGRK--SILKLAERMVMSFCT 500

Query: 417 ALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASM 473
            +   T   W+ L + G DDV V    S   P +  G+ LS    F              
Sbjct: 501 GVGASTAHTWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLSAATSF-------------- 546

Query: 474 LLQDVPPAILLRFLRE--HRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQV--ILP 529
               VP   +  FL++  HRSEW     D  S                   GGQV  +  
Sbjct: 547 -WIPVPSKKVFDFLKDENHRSEW-----DILSN------------------GGQVQEMAH 582

Query: 530 LAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDAS 589
           +A+  +    + ++++ +    + +M++     L + C+    ++ G  + +++AP+D S
Sbjct: 583 IANGRDPGNCVSLLRVNSTNSSQSNMLI-----LQESCT----DSTG--SYVIYAPVDIS 631

Query: 590 F---------SDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSST 640
                      D   ++PSGF I+P     D P              GP G         
Sbjct: 632 AMNIVLSGGDPDYVALLPSGFAILP-----DGPG------------YGPAG-------IL 667

Query: 641 QCGSTKSVITIAFQF 655
             GS  S++T+AFQ 
Sbjct: 668 DVGSGGSLLTVAFQI 682


>gi|356511234|ref|XP_003524332.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 713

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 177/788 (22%), Positives = 303/788 (38%), Gaps = 187/788 (23%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           GGS+   +  G        +Y R+T  Q++ LE ++ ECP P   +R QL RE      +
Sbjct: 4   GGSQSPGEQDGSDSQERRKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSREL----GL 59

Query: 67  EPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLMEE--------------N 109
            P+QIK WFQNRR + K   +R +   L+A N K+   N  + E               N
Sbjct: 60  APRQIKFWFQNRRTQMKAQHERADNCALRADNDKIRCENIAIREALKNVICPSCGGPPLN 119

Query: 110 DRLQKQVSQLVYENTFFRQQTQNAATLA--------------------TTDTSCES---- 145
           D       +L  EN   +++    +++A                    + D S  S    
Sbjct: 120 DDSYFNDHKLRLENAHLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMASFGNQ 179

Query: 146 --------------VVTSGQHHLTPQQQHQHPPRDASPAGLLS-IAEETLTEFLSKATGT 190
                         ++ +G     P   +Q P        L+S IA   + EFL      
Sbjct: 180 GMVGPAPAPSLNLDLLPAGTSSSMPNLPYQPPCLSDMDKSLMSDIASNAMEEFLRLVQTN 239

Query: 191 AVEWVQ-------------------MPGMKPGPDSIGIVAISHGCTGVAARACGLVGL-- 229
              W++                    P  +    ++ I A S     V   +  LV +  
Sbjct: 240 EPLWLKSNVDRRDVLSSDAYDRMFSKPNTRSKNPNVRIEA-SRDSGVVLLNSLALVDMFM 298

Query: 230 DPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS-SGTIELLYMQLYAPTTLAPARDFWLLR 288
           DP +  ++    P+     R+++V++    GS SG+++L+Y +L   + L   R+F+ LR
Sbjct: 299 DPNKWIQLF---PTIVSVARTIQVISSGVMGSCSGSLQLMYQELQVLSPLVSTREFYFLR 355

Query: 289 YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV---RAEMLPSGYLIRPCEGGGSIIHIV 345
           Y   +E G+  V + S +        PQ  HF    R+   PSG LI+    G S I  +
Sbjct: 356 YCQQIEQGTWAVMDVSYD-------FPQDSHFAPQFRSHRCPSGCLIQDMPDGHSKITWI 408

Query: 346 DHMDLEPWSVPEVL--RPLYESSTLIAQK--TTMAALRHLRQISQEVSQPSVTGWG---R 398
           +H+++E  ++P  L    +Y      A++  TT+  +          S P+    G    
Sbjct: 409 EHVEIEDKTLPHRLYRNLIYSGMAFGAERWLTTLQRMCERFTYLMATSNPTRDNLGGVIS 468

Query: 399 RPAALRA---LSQRLSRGFNEALNGFTDEGWSMLE--SDGIDDVTVHVNSSPSKMMGVQL 453
            P   R+   L+QR+   F  +++  +   W+ L   ++ +  VTVH +S P +  GV L
Sbjct: 469 SPEGKRSMMKLAQRMVTDFCASISTSSGHRWTTLSGLNEIVVRVTVHKSSDPGQPNGVVL 528

Query: 454 SYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGP 511
           S                A+ +    PP  +  F ++   R +W                 
Sbjct: 529 S---------------AATTIWLPTPPHTVFNFFKDENKRPQWD---------------- 557

Query: 512 CSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVD 571
               V   GN   Q +  +A+ +     + V++  N +          ++ +LQ      
Sbjct: 558 ----VLSNGN-AVQEVANIANGLHPGNCISVLRAFNNSQ---------NMLILQ------ 597

Query: 572 ENAVGNCAEL-VFAPIDASFSDDA---------PIIPSGFRIIPLDSGKDTPSPNRTLDL 621
           E+ + +   L V+ P+D    + A         P++P+GF I+P   G+    P++  D 
Sbjct: 598 ESCIDSYGSLVVYCPVDLPSINTAVSGEDPSYIPLLPNGFTILP--DGQ----PDQEGDG 651

Query: 622 ASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIAS-V 680
           AS          +S  +     S  S++TIAFQ          V   +   V  +I S V
Sbjct: 652 AST---------SSNTNRNIARSGGSLVTIAFQILVSSLPSAKVNMESVTTVNNLIGSTV 702

Query: 681 QRVALALS 688
           Q++  +LS
Sbjct: 703 QQIKSSLS 710


>gi|449515643|ref|XP_004164858.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           HDG2-like [Cucumis sativus]
          Length = 760

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 160/750 (21%), Positives = 289/750 (38%), Gaps = 167/750 (22%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 84
           +Y R+T  Q++ +E  + ECP P   +R++L RE     N+EP Q+K WFQN+R + K  
Sbjct: 87  RYHRHTQHQIQQMEAFFKECPHPDDKQRKELSREL----NLEPLQVKFWFQNKRTQMKTH 142

Query: 85  ---------RKEASRLQAVNRKL---------------TAMNKL------LMEENDRLQK 114
                    R E  +L+A N +                TA+ ++      L  EN RL++
Sbjct: 143 HERHENTQLRTENEKLRADNMRYREALSNATCPNCGGPTAIGEMSFDEHHLRLENARLRE 202

Query: 115 QVSQL-VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQ------------ 161
           ++ ++      +  +   N   L+T   S    +  G +                     
Sbjct: 203 EIDRISAIAAKYVGKPVSNYPLLSTPIPSRPLELGMGSYGGHDLGLGPGGGDMFGAADLL 262

Query: 162 ---HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSI----------- 207
                P +A    ++ +A   + E +  A      W  M G+    + +           
Sbjct: 263 RTISAPSEADKPVIIELAVAAMEELVRMAQMGEPLW--MTGVDRSTNELNEEEYVRSFPR 320

Query: 208 GIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSG 263
           GI     G +  A+RA  +V ++   + E+L D   W      +      + VL TG +G
Sbjct: 321 GIGPKPSGFSCEASRATAVVIMNHISLVEMLMDVNQWSTTFTGIVSRAMTLEVLSTGVAG 380

Query: 264 T----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
                ++++  +L  P+ L P R+ + +RY     +G+  V + SL+  +  P++     
Sbjct: 381 NYNGALQVMTSELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDTLRPAPAL----- 435

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL- 378
             R    PSG LI+    G S +  V+H++++   V  +   L  S      K  +A L 
Sbjct: 436 --RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLD 493

Query: 379 RHLRQISQEVSQP--------SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
           R   +++  ++           +T    R + L+ L++R+   F   ++  T   W+ L 
Sbjct: 494 RQCERLASAMATSIIPHGDAGVITNQEGRKSMLK-LAERMVMSFCGGVSASTTHTWTTLS 552

Query: 431 SDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH 490
             G DDV V    S               P   + ++ + A+     +PP  +  FLR+ 
Sbjct: 553 GTGADDVRVMTRKSVDD------------PGRPSGIVLSAATSFWLPLPPNRVFHFLRDE 600

Query: 491 --RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENM 548
             R+EW     D  S                    G V+  +AH     +    + L  +
Sbjct: 601 NSRNEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRV 636

Query: 549 AHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPS 599
                     S++ +LQ  S  D+ A    + +++AP+D             D   ++PS
Sbjct: 637 NSANSSQ---SNMLILQESS-TDQTA----SFVIYAPVDIVSINVVLNGGDPDYVALLPS 688

Query: 600 GFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           GF I+P              D ++A   GP           + GS  S++T+AFQ   + 
Sbjct: 689 GFAILP--------------DGSTASSGGP--------GVGEHGSGGSLLTVAFQILVDS 726

Query: 660 HLQENVASMARQYVRGIIA-SVQRVALALS 688
                ++  +   V  +IA +V+R+  +LS
Sbjct: 727 VPTAKLSLGSVATVNNLIACTVERIKASLS 756


>gi|213950359|gb|ACJ54444.1| GL2b [Brassica napus]
          Length = 750

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 158/682 (23%), Positives = 274/682 (40%), Gaps = 123/682 (18%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 99  YHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 154

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV--------------SQLVYENTFFRQQ 129
           +R E S L+A   KL   NK + E   +                     L  ENT  + +
Sbjct: 155 ERHENSLLKAELEKLREENKAMRESFSKANSSSCPNCGGGGGGGGSPDDLHLENTKLKAE 214

Query: 130 TQNA-ATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKAT 188
                A L  T    ++  +  QH      +          + ++ IA     E    AT
Sbjct: 215 LDKLRAALGRTPYPLQASCSDDQHRRVGSLELYTGVFALEKSRIVEIANRATLEVQKMAT 274

Query: 189 GTAVEWVQMPGMKPGPDSIGI-----------VAISHGCTGV-AARACGLVGLDPTRVAE 236
                W++   ++ G + +              +  HG   + A+R  G+V +D  ++A+
Sbjct: 275 SGEPLWLR--SLETGREILNYDEYLKEFPQAQASSFHGRKTIEASRDVGIVFMDAHKLAQ 332

Query: 237 ILKDRPSWYR--DCRSVEVVNVL-------PTGSSGTIELLYMQLYAPTTLAPARDFWLL 287
              D   W     C   + V V        P+   G I+L++ ++   T + P R+ + +
Sbjct: 333 SFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFV 392

Query: 288 RYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDH 347
           R    L     V+ + S++  ++  S  +    +R    PSG +I     G S +  V+H
Sbjct: 393 RSCRQLSPEKWVIVDVSVSVEEDNNSTEKEGSLLRCRKRPSGCIIEDTSNGHSKVTWVEH 452

Query: 348 MDLEPWSVPEVLRPLYESSTLIAQKTTMAALR-HLRQIS--QEVSQPS-----VTGWGRR 399
           +DL   +V  + R    +      +  +A L+ H  ++      + P+     VT    R
Sbjct: 453 LDLSASTVQPLFRSFVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSLGVTTLAGR 512

Query: 400 PAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYV 456
            + L+ ++QR+++ F  A+   +   W+ + +    D+ V    +   P +  GV     
Sbjct: 513 KSVLK-MAQRMTQSFYRAIAASSYHQWNKITTKTGQDMRVSSRKNLHDPGEPTGV----- 566

Query: 457 NGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSL 514
                    ++CA +S+ L  V P +L  F R+   R EW     DA S  A      SL
Sbjct: 567 ---------IVCASSSLWL-PVSPTLLFDFFRDETRRHEW-----DALSNGAHVQSIVSL 611

Query: 515 PVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM--PSDIFLLQLCSGVDE 572
              +  + G  V +    T++  E    +  ++  +  E +++  P DI           
Sbjct: 612 --SKGQDRGNSVSI---QTVKSREKSTWVLQDSCTNSYESVVVYAPVDI----------- 655

Query: 573 NAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGN 632
               N  +LV A  D S   +  I+P GF IIP   G ++    R L ++SA E      
Sbjct: 656 ----NTTQLVIAGHDPS---NIQILPCGFSIIP--DGVES----RQLVISSAQE------ 696

Query: 633 KASGDSSTQCGSTKSVITIAFQ 654
               D +TQ G   S++T+A Q
Sbjct: 697 ----DRNTQGG---SLLTLALQ 711


>gi|242095072|ref|XP_002438026.1| hypothetical protein SORBIDRAFT_10g006820 [Sorghum bicolor]
 gi|241916249|gb|EER89393.1| hypothetical protein SORBIDRAFT_10g006820 [Sorghum bicolor]
          Length = 700

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 135/550 (24%), Positives = 221/550 (40%), Gaps = 104/550 (18%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP Q++ LE ++ ECP P   +R  L RE      +EP+QIK WFQNRR + K  
Sbjct: 18  RYHRHTPRQIQQLEAMFKECPHPDENQRAALSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME---------------------------ENDRLQKQ 115
            +R +   L+A N K+   N  + E                           EN RL+++
Sbjct: 74  HERADNCFLRAENDKIRCENITMREALKNVICPNCGGPPVAEDFFDEQKLRMENARLKEE 133

Query: 116 VSQL--VYENTFFRQQTQN----AATLATTDTSCESVVTSGQHHLTPQQ----------- 158
           + ++  +      R  TQ       ++++ D S   +     H   P             
Sbjct: 134 LDRVSSITSKYLGRPFTQMPPVPTMSMSSLDLSMGGMPGQQGHLGGPPSLDLDLLSGCSS 193

Query: 159 ----QHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ-MPGMKPGPDSIGIVAIS 213
               Q   P  +     ++ +A   + E +  A      WV+ MPG      ++      
Sbjct: 194 GMPYQMPAPVTEMERPMMVDMATRAMDELIRLAQAGDQIWVKGMPGDAREMLNVATYDSL 253

Query: 214 HGCTGVA----------ARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPT 259
               GVA          +R  GLV +    + ++  D   W      +    + V+VL  
Sbjct: 254 FSKPGVAFRPPDMNVEGSRDSGLVFMSAVALVDVFMDTNKWMEFFPGIVSKAQTVDVLVN 313

Query: 260 GSSGTIE---LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGP-SMP 315
           G  G  E   ++Y +L+  T + P R+   LRY   +E G   + + SL+  ++    MP
Sbjct: 314 GLGGRSESLIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAIADVSLDGQRDAHYGMP 373

Query: 316 QAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTLIAQKTT 374
                 R+  +PSG LI     G S +  V+HM++E      VL R L  S         
Sbjct: 374 S-----RSRRMPSGCLIADMSNGYSKVTWVEHMEIEQMLPINVLYRNLVLSGAAFGAHRW 428

Query: 375 MAALRHLRQISQEVSQ--------PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW 426
           +AAL+   +    V+           VT  G+R  ++  LSQR+   F  +L+    + W
Sbjct: 429 LAALQRACERFASVATLGVPHHDIAGVTPEGKR--SMMKLSQRMVGSFCASLSSSPLQRW 486

Query: 427 SMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
           ++L   G  DV+V V++  S   G Q           N V+ + A+ +   VP   +  F
Sbjct: 487 TLLS--GTTDVSVRVSTHRSTDSGGQ----------PNGVVLSAATSIWLPVPGDHVFAF 534

Query: 487 LREH--RSEW 494
           +R+   RS+W
Sbjct: 535 VRDENARSQW 544


>gi|296089063|emb|CBI38766.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 173/753 (22%), Positives = 299/753 (39%), Gaps = 148/753 (19%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M  +SG  +D+ D+  +K      +Y R+TP+Q++ LE L+ ECP P   +R +L R   
Sbjct: 96  MDGASGDDQDAADNPPRKK-----RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRL- 149

Query: 62  ILSNIEPKQIKVWFQNRRCREKQ----------RKEASRLQAVNRKLTAMNKLLMEENDR 111
              ++E +Q+K WFQNRR + K           R+E  +L+A N  +    +  +  N  
Sbjct: 150 ---SLETRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRAENMSIRDAMRNPICTNCG 206

Query: 112 LQKQVSQLVYENTFFRQQTQNAATLATTDTSCESV-------VTSGQHHLTPQQQHQHPP 164
               +  +  E    R   +NA      D  C          ++S    + P        
Sbjct: 207 GPAIIGDISLEEQHLR--IENARLKDELDRVCALAGKFLGRPISSLASSMAPAMPSSSLE 264

Query: 165 RDASPAG-------LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHG-- 215
                 G        L +A   + E +  A      WV+   ++ G + + +        
Sbjct: 265 LGVGSNGGISSTSMFLELALAAMDELVKMAQTDEPLWVR--SLEGGREILNLEEYMRTFT 322

Query: 216 -CTGV--------AARACGLVGLDPTRVAEILKDRPSWYR--DCR--SVEVVNVLPTGSS 262
            C G+        + R  G+V ++   + E L D   W     C        +V+ +G  
Sbjct: 323 PCIGMKPSGFVTESTRETGMVIINSLALVETLMDSNRWAEMFPCMIARTSTTDVISSGMG 382

Query: 263 GT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
           GT    ++L++ +L   + L P R+   LR+     +G   V + S++  +       AP
Sbjct: 383 GTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRE---TSVAP 439

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
            FV    LPSG +++    G S +  V+H + +  +V ++ RPL  S      +  +A L
Sbjct: 440 TFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESAVHQLYRPLLGSGMGFGAQRWVATL 499

Query: 379 RHLRQ-----ISQEVSQPS------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           +  RQ     I    + P+      +T  GRR  ++  L+QR++  F   +   T   W+
Sbjct: 500 Q--RQCECLAILMSSTVPTRDHTAAITAGGRR--SMLKLAQRMTDNFCAGVCASTVHKWN 555

Query: 428 MLESDGID-DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
            L +  +D DV V    S               P     ++ + A+ +   V P  L  F
Sbjct: 556 KLCAGNVDEDVRVMTRKSVDD------------PGEPPGIVLSAATSVWLPVSPQRLFDF 603

Query: 487 LREHR--SEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIK 544
           LR+ R  SEW     D  S      GP             Q +  +A   +H   + +++
Sbjct: 604 LRDERLRSEW-----DILS----NGGPM------------QEMAHIAKGQDHGNCVSLLR 642

Query: 545 LENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------ASFSDDA--P 595
              M   +  M++     L + C     +A G+   +V+AP+D        +  D A   
Sbjct: 643 ASAMNANQSSMLI-----LQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVA 691

Query: 596 IIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
           ++PSGF I+P   G  +  PN  +   S    GP  N+ SG          S++T+AFQ 
Sbjct: 692 LLPSGFAIVP--DGPGSRGPNSGVHTNSG---GP--NRVSG----------SLLTVAFQI 734

Query: 656 AFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
                    +   + + V  +I+ +VQ++  AL
Sbjct: 735 LVNSLPTAKLTVESVETVNNLISCTVQKIKAAL 767


>gi|224069018|ref|XP_002302880.1| predicted protein [Populus trichocarpa]
 gi|222844606|gb|EEE82153.1| predicted protein [Populus trichocarpa]
          Length = 756

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 174/772 (22%), Positives = 296/772 (38%), Gaps = 184/772 (23%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D +D   +K      +Y R+T  Q++ +E  + ECP P   +R++L RE      +
Sbjct: 75  GASGDDQDPRPKKK-----RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GL 125

Query: 67  EPKQIKVWFQNRRCREKQ----------RKEASRLQAVNRKL---------------TAM 101
           EP Q+K WFQN+R + K           R E  +L+A N +                TA+
Sbjct: 126 EPLQVKFWFQNKRTQMKTQHERHENTQLRNENEKLRADNMRYREALSNASCPNCGGPTAI 185

Query: 102 NKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQ 161
            ++  +E+         L  ENT  R++    + +A      + VV        P     
Sbjct: 186 GEMSFDEH--------HLRLENTRLREEIDRISAIAARYVG-KPVVN------YPVLSPP 230

Query: 162 HPPR-----------------DASPAG--LLSIAEETLTE---FLSKATGTAVEWVQMPG 199
            PPR                 D   AG  L SI+  T  +    +  A     E ++M  
Sbjct: 231 MPPRPVDLGVGNFGGQPGLGGDIYEAGDLLRSISAPTEADKPMIIELAVAAMEELIRMAQ 290

Query: 200 MKP--------GPDSI------------GIVAISHGCTGVAARACGLVGLDPTRVAEILK 239
           M          G D++            GI     G    A+R   +V ++   + E L 
Sbjct: 291 MDEPLWMNSLDGIDAVLNEDEYIRIFPHGIGPKPTGFKCEASRESAVVIMNHINLVEYLM 350

Query: 240 DRPSWYRDCRSVE----VVNVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTS 291
           D   W      +      + VL TG +G     ++++  +   PT L P R+ + +RY  
Sbjct: 351 DVNQWSTLFSGIVSRALTLEVLSTGVAGNYNGALQVMTAEFQLPTPLVPTRESYYVRYCK 410

Query: 292 VLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLE 351
              DG+  V + SL++ + GP+        R    PSG LI+    G S +  V+H++++
Sbjct: 411 QHADGTWAVVDVSLDSIRPGPA-------ARCRRRPSGCLIQEMPNGYSKVTWVEHVEVD 463

Query: 352 PWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQPSVTG--------WGRRPAA 402
              V  + + L  S      K  +A L R   +++  ++     G         GR+  +
Sbjct: 464 DRGVHNLYKHLVSSGHAFGAKRWVATLNRQCERLASAMATNIPAGDAGVITNQEGRK--S 521

Query: 403 LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSM 462
           +  L++R+   F   ++  T   W+ L   G DDV V    S               P  
Sbjct: 522 MMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD------------PGR 569

Query: 463 SNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAG 520
              ++ + A+     VPP  +  FLR+   R+EW     D  S                 
Sbjct: 570 PPGIVLSAATSFWLPVPPKRVFDFLRDENTRNEW-----DILS----------------- 607

Query: 521 NFGGQVILPLAHTIEHEEFLEVIKL--ENMAHYREDMIMPSDIFLLQLCSGVDENAVGNC 578
              G V+  +AH     +    + L   N A+  +     S++ +LQ  S  D+ A    
Sbjct: 608 --NGGVVQEMAHIANGRDTGNCVSLIRVNSANSSQ-----SNMLILQE-SCTDQTA---- 655

Query: 579 AELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDS 638
           + +++AP+D               I+ ++   +   P+    L S   + P G  A G  
Sbjct: 656 SFVIYAPVD---------------IVAMNVVLNGGDPDYVALLPSGFAIFPDGTAAHGVG 700

Query: 639 STQCGST-KSVITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALALS 688
             + GST  S++T+AFQ   +      ++  +   V  +IA +V+R+  +LS
Sbjct: 701 MDESGSTGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 752


>gi|357453443|ref|XP_003596998.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355486046|gb|AES67249.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 774

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 132/557 (23%), Positives = 220/557 (39%), Gaps = 130/557 (23%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 84
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 162

Query: 85  ---------RKEASRLQAVNRKL---------------TAMNKLLMEENDRLQKQVSQLV 120
                    R E  +L+A N +                TA+ ++  +E+         L 
Sbjct: 163 QERHENTSLRTENEKLRADNMRFREALSNASCPNCGGPTAIGEMSFDEH--------HLR 214

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHP----------------- 163
            EN+  R++    + +A      + VV+     L+P      P                 
Sbjct: 215 IENSRLREEIDRISAIAAKYVG-KPVVSYPL--LSPSSVPPRPLELGIGGFGGQPGMGGD 271

Query: 164 -------------PRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPG------- 203
                        P +A    ++ +A   + E +  A      W  +P ++ G       
Sbjct: 272 MYGAGDLLRSISGPTEADKPMIIELAVAAMEELIGMAQMGDPLW--LPTLEGGSILNEEE 329

Query: 204 -----PDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVV 254
                P  IG       C   A+R   +V ++   + EIL D   W      +      +
Sbjct: 330 YVRSFPRGIGPKPAGFKCE--ASRESSVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTL 387

Query: 255 NVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQN 310
            VL TG +G     ++++  +L  P+ L P R+ + +RY     DG+  V + SL+N + 
Sbjct: 388 EVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRP 447

Query: 311 GPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIA 370
            PS        R+   PSG LI+    G S +  V+H++++   V  + + L  S     
Sbjct: 448 SPS-------ARSRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFG 500

Query: 371 QKTTMAAL-RHLRQISQEVSQ--PSV-----TGWGRRPAALRALSQRLSRGFNEALNGFT 422
            K  +A L R   +++  ++   P+V     T    R + L+ L++R+   F   ++  T
Sbjct: 501 AKRWIATLDRQCERLASAMATNIPTVDVGVITNQDGRKSMLK-LAERMCISFCAGVSAST 559

Query: 423 DEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
              W+ L   G DDV V    S   P +  G+              VL A  S  L  VP
Sbjct: 560 AHTWTTLSGTGADDVRVMTRKSVDDPGRPAGI--------------VLSAATSFWLP-VP 604

Query: 480 PAILLRFLREH--RSEW 494
           P  +  FLR+   RSEW
Sbjct: 605 PKRVFEFLRDENSRSEW 621


>gi|357166100|ref|XP_003580598.1| PREDICTED: homeobox-leucine zipper protein ROC2-like [Brachypodium
           distachyon]
          Length = 787

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 166/752 (22%), Positives = 288/752 (38%), Gaps = 174/752 (23%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  Y EC  P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 115 RYHRHTQHQIQEMEAFYKECQHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQTKNQ 170

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 114
            +R E S+L+  N KL A N    E                            EN RL+ 
Sbjct: 171 QERHENSQLRGENDKLRAENMRYKEALSSASCPSCGGPAALGEMSFDEHHLRLENARLRD 230

Query: 115 QVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQ--QHQHPPRDASPAG- 171
           ++ ++       +   + A           +V   G HHL      + Q P R    AG 
Sbjct: 231 EIDRI--SAIAAKYVGKPAVPFPVLSNPLAAVGAYGHHHLGADMFGELQQPMRPTGGAGD 288

Query: 172 -----LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIG---------------IVA 211
                ++ +A   + E L         W   PG+    +++                +  
Sbjct: 289 QNKGVVVELAVAAMEELLRMTRLNEPLWAG-PGVAGPMETLNEEEYARMFGGPRGGGLGP 347

Query: 212 ISHG-CTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSG--- 263
             +G     A+R   +V L P  + EIL D   +     S+      + VL TG +G   
Sbjct: 348 KQYGQLVSEASRESAVVILTPANLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGCYD 407

Query: 264 -TIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVR 322
             ++++ ++   P+ L P R+ + +RY     DG+  V + SL+  Q           ++
Sbjct: 408 GALQVMSVEFQVPSPLVPTRESYFVRYCKQNSDGTWAVVDVSLDTLQG----------IK 457

Query: 323 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHL 381
               PSG LI+    G S +  V+H++++  SV  + + L  S      +  + AL R  
Sbjct: 458 CRRRPSGCLIQEAPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGALGRQC 517

Query: 382 RQISQEV------SQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID 435
            +++  +      S   V        ++  L++R+   F   +       W+ L   G +
Sbjct: 518 ERLASVMASNIPNSDIGVITSSEGKKSMLKLAERMVASFCGGVTASVAHQWTRLSGSGAE 577

Query: 436 DVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH-- 490
           DV V    S   P +  G+              VL A  S  L  VPP  +  FLR+   
Sbjct: 578 DVRVMTRQSVDDPGRPPGI--------------VLNAATSFWL-PVPPKRVFDFLRDETS 622

Query: 491 RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAH 550
           RS+W     D  S   V                 Q +  +A+  +H   + ++++ +   
Sbjct: 623 RSQW-----DILSNGGVV----------------QEMAHIANGRDHGNCVSLLRVNSTNS 661

Query: 551 YREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGF 601
            + +M++     L + C+    +A G  + +++AP+D             D   ++PSGF
Sbjct: 662 NQSNMLI-----LQESCT----DASG--SYVIYAPVDIVAMNVVLNGGDPDYVALLPSGF 710

Query: 602 RIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDS----STQCGSTKSVITIAFQFAF 657
            I+P                      GP GN  +G          GS  S++T+AFQ   
Sbjct: 711 AILP---------------------DGPAGNIHTGGGPSVSDGGVGSGGSLLTVAFQILV 749

Query: 658 EMHLQENVASMARQYVRGIIA-SVQRVALALS 688
           +      ++  +   V  +IA +V+R+  A+S
Sbjct: 750 DSVPTAKLSLGSVATVNSLIACTVERIKAAVS 781


>gi|449439589|ref|XP_004137568.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
 gi|449517265|ref|XP_004165666.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
          Length = 705

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 164/726 (22%), Positives = 278/726 (38%), Gaps = 177/726 (24%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+   Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 23  RYHRHNANQIQRLEAMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 78

Query: 84  -QRKEASRLQAVN----------------------------------RKLTAMNKLLMEE 108
            +R + S L+A N                                   KL   N  L EE
Sbjct: 79  HERADNSALRAENDKIRCENIAIREALKNVICPSCGGPPLQDPYFDEHKLRIENAHLKEE 138

Query: 109 NDRLQ--------KQVSQLV-YENTFFRQQTQNAATLATTDTSCESV---VTSGQHHLTP 156
            DR+         + +SQL   + + F     +  +  + +  C S+   + S      P
Sbjct: 139 LDRVSSIAAKYIGRPISQLPPIQPSHFSSLELSMGSFPSQEMGCPSLDLDLLSASSTSVP 198

Query: 157 QQQHQHPPR--DASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISH 214
              + HP        + +  IA   + E L  +      W++ P    G D + +    H
Sbjct: 199 NLPYHHPIHLSTVDKSLMTEIATNAMAELLRLSQTNEPFWMKSP--TDGRDLLDLETYEH 256

Query: 215 GC------------TGVAARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVN 255
                            A+R  G+V +    + +I  D   W           R++EVV+
Sbjct: 257 AFPRPNTPLKNLHFRTEASRDSGVVIISSAALVDIFMDSNKWTELFPTIVSVARTLEVVS 316

Query: 256 VLPTGS-SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGP-- 312
               GS +G+++L+Y +L   + L P R F+ +RY   +E G   V + S N  +     
Sbjct: 317 SGMLGSQNGSLQLMYQELQLLSPLVPTRHFYFIRYCQQIEQGVWAVVDVSYNIPRENQIV 376

Query: 313 SMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEP-WSVPEVLRPLYESSTLIAQ 371
           S PQ   F      PSG LI+    G S +  ++H+++E   S   + R L  S      
Sbjct: 377 SHPQCHRF------PSGCLIQDMPNGYSKVTWIEHVEVEDRGSTHWLFRDLIHSGLAFGA 430

Query: 372 KTTMAALRHLRQ------ISQEVSQ------PSVTGWGRRPAALRALSQRLSRGFNEALN 419
           +  +A L+ + +      ++   +Q      PS+ G      ++  L+QR+   F  +++
Sbjct: 431 ERWLATLQRMSERFACLMVTSSSNQDLGGVIPSLEG----KRSMMKLAQRMVNNFCASIS 486

Query: 420 GFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
                 W+ L   G+++V V V         V  S  +G P   N V+ + A+ +   V 
Sbjct: 487 TSHGHRWTTLS--GMNEVGVRVT--------VHKSTDSGQP---NGVVLSAATTIWLPVS 533

Query: 480 PAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEF 539
           P  +  F +  R+    S  D  S           PV        Q +  +++       
Sbjct: 534 PQTIFNFFKNDRTR---SQWDVLSEGN--------PV--------QEVAHISNGSHPGNC 574

Query: 540 LEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAEL-VFAPIDASFSDDA---- 594
           + V++  N +         +++ +LQ      E+ + +   L V+ P+D    + A    
Sbjct: 575 ISVLRGFNTSQ--------NNMLILQ------ESCIDSSGSLVVYCPVDLPAMNVAMSGE 620

Query: 595 -----PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVI 649
                P++PSGF I+P D  +D                   G  AS  S     S  S++
Sbjct: 621 DPSSIPLLPSGFTILP-DGRRD------------------QGEGASSSSDVHNRSGGSLV 661

Query: 650 TIAFQF 655
           T+AFQ 
Sbjct: 662 TVAFQI 667


>gi|356497482|ref|XP_003517589.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 731

 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 161/750 (21%), Positives = 292/750 (38%), Gaps = 179/750 (23%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T  Q+E +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K   
Sbjct: 66  YRRHTQRQIEEMEAFFKQCPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQH 121

Query: 84  QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQKQ 115
           +R E + L+A N KL A N    E                            EN RL+++
Sbjct: 122 ERNENAILKAENEKLRAENSRYKEALTNATCPNCGGPAALGEMSFDEQHLRIENARLREE 181

Query: 116 VSQL--VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQH--------PPR 165
           + ++  +      +  T + + L++ + +   V   G    T  + +           P 
Sbjct: 182 IDRISGIAAKYVGKPVTSSYSNLSSLNNNHVPVGNYGSQSGTVGEMYGGSDLFRPLPAPA 241

Query: 166 DASPAGLLSIAEETLTEFLSKATGTAVEWV----------------QMPGMKPGPDSIGI 209
           DA    ++ +A   + E    A      WV                  P    GP  +G+
Sbjct: 242 DADKPMIVELAVAAMEELTRLAQAGEPLWVPSNHHSEILNEDEYLRTFPTRGLGPKPLGL 301

Query: 210 VAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD-CRSVE---VVNVLPTG----S 261
            +        A+R   +V ++   + +IL D   W    C  V     + VL TG     
Sbjct: 302 RS-------EASRESVVVIMNHINLIDILMDVNQWSTVFCGIVSRALTLEVLSTGIAGNY 354

Query: 262 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 321
           +G ++++  +    + L P R+ + +RY     DG   V + SL+N +  PS        
Sbjct: 355 NGALQVMSSEFQVASPLVPTRENYFVRYCKQQPDGIWAVVDVSLDNLR--PST-----IS 407

Query: 322 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RH 380
           R+   PSG LI+    G S +  ++H++++  +V  + R L  S      K  +A L R 
Sbjct: 408 RSRRRPSGCLIQELPNGYSKVTWIEHVEVDDRAVHSIYRTLVNSGLAFGAKRWVATLERQ 467

Query: 381 LRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESD 432
             +++  ++     G         GR+  ++  L++R+   +   +   T   W+ L + 
Sbjct: 468 CERLASSMANNIPAGDLCVITSAEGRK--SMMKLAERMVMSYCTGVGASTAHAWTTLSAT 525

Query: 433 GIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH-- 490
           G DDV V    S  +            P     ++ + A+     VPP  +  FLR+   
Sbjct: 526 GCDDVRVMTRKSTDE------------PGRPPGIVLSAATSFWLPVPPKRVFHFLRDQNS 573

Query: 491 RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE---FLEVIKLEN 547
           R+EW     D  S                    G ++  LAH     +    + ++++ +
Sbjct: 574 RNEW-----DILS-------------------NGGLVQELAHIANGRDPGNCVSLLRVNS 609

Query: 548 MAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIP 598
               + +M++     L + C+    ++ G  + +V+AP+D             D   ++P
Sbjct: 610 ANSSQSNMLI-----LQESCT----DSTG--SYVVYAPVDIVAMNVVLSGGDPDYVALLP 658

Query: 599 SGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFE 658
           SGF I+P              D   AL  GP  +  SG          S++T+AFQ   +
Sbjct: 659 SGFAILP--------------DGPPALNGGPIHDVGSG---------GSLLTVAFQILVD 695

Query: 659 MHLQENVASMARQYVRGII-ASVQRVALAL 687
                 ++  +   V  +I  +V+R+ +A+
Sbjct: 696 SAPTAKLSLGSVATVNSLIKCTVERIKVAV 725


>gi|413939124|gb|AFW73675.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 701

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 145/576 (25%), Positives = 230/576 (39%), Gaps = 132/576 (22%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           GG        +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WF
Sbjct: 10  GGSDAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWF 65

Query: 76  QNRRCREK---QRKEASRLQAVNRKLTAMNKLLME------------------------- 107
           QNRR + K   +R++   L+A N K+   N  + E                         
Sbjct: 66  QNRRTQMKAQHERQDNCFLRAENDKIRCENIAMQEALRNVICPTCGGPPVADDHFDEQKL 125

Query: 108 --ENDRLQKQVSQL--VYENTFFRQQTQ----NAATLATTDTSCESVVT-SGQHHLTPQQ 158
             EN RL++++ ++  +      R  TQ     A ++++ D S   +   S    L    
Sbjct: 126 RMENARLKEELDRVSSLTSKYLGRPITQLPSAQALSMSSLDLSVGGLGGPSLDLDLLSGG 185

Query: 159 QHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE--------WVQMPG----------- 199
              +PP    P  +  +    + E  ++A    +         WV+  G           
Sbjct: 186 SSGYPPFHLLPMAVSEMERPMMAEMATRAMDELIRMAQAGEHLWVKTGGREVLNVDTYDS 245

Query: 200 --MKP-----GPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR------ 246
              KP     GPD    V +        +R  GLV +    + ++  D   W        
Sbjct: 246 IFAKPDGSFRGPD----VHVE------GSRETGLVFMSAIGLVDMFMDSSKWTELFPAIV 295

Query: 247 -DCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSL 305
              R+V+V+     G S ++ L+Y +L+  + + P R+F  LRY   +E G   + + S+
Sbjct: 296 SKARTVDVLVNGMGGRSESLLLMYEELHVMSPVVPTREFCFLRYCRQIEHGLWAIADISV 355

Query: 306 NNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL--RPLY 363
           +  Q        P   R+  LPSG LI     G S +  V+HM++E   VP  L  R L 
Sbjct: 356 DQQQRDARFGAPPS--RSCRLPSGCLIADMADGSSKVTWVEHMEIED-RVPIHLLYRDLV 412

Query: 364 ESSTLIAQKTTMAALRHL---------------RQISQ--EVSQP---SVTGWGRRPAAL 403
            S         +AAL+                 R I+   ++S     +VT  G+R  ++
Sbjct: 413 LSGAAFGAHRWLAALQRACERCACLATAGIMPHRDIAAAGDISHRELLAVTPEGKR--SM 470

Query: 404 RALSQRLSRGFNEALNGFTDEGWSMLESDGIDD----VTVHVNSSPSKMMGVQLSYVNGF 459
             LSQR+   F  +L+      W+ L   G +D    V VH ++ P +  GV LS     
Sbjct: 471 MKLSQRMVNSFCASLSASQLHRWTTLS--GPNDVGVRVMVHRSTDPGQPSGVVLSAAT-- 526

Query: 460 PSMSNAVLCAKASMLLQDVPPAILLRFLREH-RSEW 494
            S+   V C +A   ++D           EH RS+W
Sbjct: 527 -SIWLPVPCDRAFAFVRD-----------EHTRSQW 550


>gi|255549944|ref|XP_002516023.1| homeobox protein, putative [Ricinus communis]
 gi|223544928|gb|EEF46443.1| homeobox protein, putative [Ricinus communis]
          Length = 758

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 161/749 (21%), Positives = 295/749 (39%), Gaps = 197/749 (26%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 86
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR       
Sbjct: 109 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRR------- 157

Query: 87  EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESV 146
             ++++A+  +          EN  L+ ++ +L  EN   R+    A        +C + 
Sbjct: 158 --TQIKAIQER---------HENSLLKTEMEKLRDENKAMRETINKACC-----PNCGTA 201

Query: 147 VTSGQHHLTPQQQH--------------------QHPPRDASPA---------------- 170
            TS    LT ++Q                     ++PP  A+P+                
Sbjct: 202 TTSRDTSLTTEEQQLRIENAKLKSEVEKLRAALGKYPP-GAAPSCSAGSEQENRSSLDFY 260

Query: 171 -GLLSIAEETLTEFLSKAT------GTAVE--WV-------QMPGMKPGPDSIGIVAISH 214
            G+  + +  +TE  ++A        TA E  W+       ++           +   S+
Sbjct: 261 TGIFGLEKSRITEIANQAMEELNKMATAGEPLWIRSVETDREILNYDEYIKEFNVENPSN 320

Query: 215 GCTGVA---ARACGLVGLDPTRVAEILKDRPSWYR--DC--RSVEVVNVLPTGS----SG 263
           G +  +   +R  G+V +D  R+ +   D   W     C       V+V+  G      G
Sbjct: 321 GRSKKSIEVSRETGVVFVDLPRLVQSFTDVNHWKEMFPCLISKAATVDVICNGEGPNRDG 380

Query: 264 TIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRA 323
            ++L++ ++   T + P R+ + +RY   L      + + S++N ++          V+ 
Sbjct: 381 AVQLMFAEVQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDNVEDNID----ASLVKC 436

Query: 324 EMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL----- 378
              PSG +I     G   +  V+H++ +  +V  + R +  +      +  +A L     
Sbjct: 437 RKRPSGCIIEDKSNGHCKVTWVEHLECQKSTVHTIYRTIVNTGLAFGARHWVATLQLQCE 496

Query: 379 RHLRQISQEVSQPSVTG----WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           R +  ++  V     TG     GR+  ++  L+QR++  F  A+   +   W+ + S   
Sbjct: 497 RIVFFMATNVPTKDSTGVATLAGRK--SILKLAQRMTWSFCRAIGASSYHTWNRVTSKTG 554

Query: 435 DDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE-- 489
           +D+ +    +   P++ +GV              +LCA +S+ L  V P +L  +LR+  
Sbjct: 555 EDIRISSRKNLNDPAEPLGV--------------ILCAVSSVWLP-VSPHVLFDYLRDDT 599

Query: 490 HRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMA 549
           HR+EW     D  S                   GGQV   +A+  + ++    + ++ M 
Sbjct: 600 HRNEW-----DIMSN------------------GGQV-QSIANLAKGQDRGNAVTIQTMK 635

Query: 550 HYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASF---------SDDAPIIPSG 600
               +M +  D      C+   E+ V      V+AP+D +          S    I+PSG
Sbjct: 636 SNENNMWVLQD-----CCTNAYESIV------VYAPVDINGMQSVITGCDSSSTAILPSG 684

Query: 601 FRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF----- 655
           F I+P   G +T    R L + S  E          +  T+ G   S++T+AFQ      
Sbjct: 685 FAILP--DGLET----RALVITSRRE----------EKRTEGG---SLLTVAFQILTNTS 725

Query: 656 ---AFEMHLQENVASMARQYVRGIIASVQ 681
                 M   E+V ++    +R I  S+Q
Sbjct: 726 PTAKLTMESVESVNTLISCTLRNIKTSLQ 754


>gi|356540579|ref|XP_003538765.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 732

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 159/751 (21%), Positives = 292/751 (38%), Gaps = 181/751 (24%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T  Q+E +E  + + P P   +R++L RE      +EP Q+K WFQN+R + K   
Sbjct: 66  YRRHTQRQIEEMEAFFKQFPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQH 121

Query: 84  QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQKQ 115
           +R E + L+  N KL A N    E                            EN RL+++
Sbjct: 122 ERNENAILKTENEKLRAENNRYKEALSNATCPNCGGSAALGEMSFDEQHLRIENARLREE 181

Query: 116 VSQL--VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQH--------PPR 165
           + ++  +      +  T + + L++ + +   V   G    T  + +           P 
Sbjct: 182 IDRISGIAAKYVGKPVTSSYSNLSSLNNNHVPVGKYGSQSGTVGEMYGGSDLFRSLPAPA 241

Query: 166 DASPAGLLSIAEETLTEFLSKATGTAVEWV----------------QMPGMKPGPDSIGI 209
           DA    ++ +A   + E    A      WV                  P    GP  +G+
Sbjct: 242 DADKPMIVELAVAAMEELTRLAQAGDPLWVPSNHHSEILNEEEYLRTFPNRGLGPKPLGL 301

Query: 210 VAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD-CRSVE---VVNVLPTGSSGT- 264
            +        A+R   +V ++   + +IL D   W    C  V     + VL TG +G  
Sbjct: 302 RS-------EASRESVVVIMNHINLIDILMDVNQWSTVFCGIVSRALTLEVLSTGVAGNY 354

Query: 265 ---IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 321
              ++++  +   P+ L P R+ + +RY     DG   V + SL+N +        P+ +
Sbjct: 355 NGALQVMSSEFQVPSPLVPTRENYFVRYCKQQPDGIWAVVDVSLDNLR--------PNTI 406

Query: 322 -RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-R 379
            R+   PSG LI+    G S +  ++H++++  +V  + RPL  S      K  +A L R
Sbjct: 407 SRSRRRPSGCLIQELPNGYSKVTWIEHVEVDDRAVHSIYRPLVNSGLAFGAKRWVATLDR 466

Query: 380 HLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLES 431
              +++  ++     G         GR+  ++  L++R+   +   +   T   W+ L +
Sbjct: 467 QCERLASSMANNIPAGDLCVITSAEGRK--SMMKLAERMVMSYCTGVGASTAHAWTTLSA 524

Query: 432 DGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH- 490
            G DDV V    S  +            P     ++ + A+     VPP  +  FLR+  
Sbjct: 525 TGCDDVRVMTRKSTDE------------PGRPPGIVLSAATSFWLPVPPNRVFDFLRDEN 572

Query: 491 -RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE---FLEVIKLE 546
            R+EW     D  S                    G ++  LAH     +    + ++++ 
Sbjct: 573 SRNEW-----DILS-------------------NGGLVQELAHIANGRDPGNCVSLLRVN 608

Query: 547 NMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPII 597
           +    + +M++     L + C+    ++ G  + +V+AP+D             D   ++
Sbjct: 609 SANSSQSNMLI-----LQESCT----DSTG--SYVVYAPVDIVAMNVVLSGGDPDYVALL 657

Query: 598 PSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAF 657
           PSGF I+P              D   AL  GP           + GS  S++T+ FQ   
Sbjct: 658 PSGFAILP--------------DGPPALNGGPM---------HEVGSGGSLLTVGFQILV 694

Query: 658 EMHLQENVASMARQYVRGII-ASVQRVALAL 687
           +      ++  +   V  +I  +V+R+ +A+
Sbjct: 695 DSAPTAKLSLGSVATVNSLIKCTVERIKVAV 725


>gi|334184032|ref|NP_001185443.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
 gi|332198191|gb|AEE36312.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
          Length = 776

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 144/636 (22%), Positives = 258/636 (40%), Gaps = 117/636 (18%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           KY R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K  
Sbjct: 133 KYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAI 188

Query: 84  -QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV-------SQLVYENTFFRQQTQN-AA 134
            +R E S L+A   KL   NK + E   +              L  EN+  + +     A
Sbjct: 189 QERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGPDDLHLENSKLKAELDKLRA 248

Query: 135 TLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKAT------ 188
            L  T    ++  +  Q H                 G+ ++ +  + E  ++AT      
Sbjct: 249 ALGRTPYPLQASCSDDQEHRLGSLDFY--------TGVFALEKSRIAEISNRATLELQKM 300

Query: 189 GTAVEWVQMPGMKPGPDSIGI------------VAISHGCTGVAARACGLVGLDPTRVAE 236
            T+ E + +  ++ G + +               +     T  A+R  G+V +D  ++A+
Sbjct: 301 ATSGEPMWLRSVETGREILNYDEYLKEFPQAQASSFPGRKTIEASRDAGIVFMDAHKLAQ 360

Query: 237 ILKDRPSWYRD----CRSVEVVNVL-----PTGSSGTIELLYMQLYAPTTLAPARDFWLL 287
              D   W             V+V+     P+   G I+L++ ++   T + P R+ + +
Sbjct: 361 SFMDVGQWKETFACLISKAATVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFV 420

Query: 288 RYTSVLEDGSLVVCERSLN----NTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIH 343
           R    L      + + S++    NT+   S+      ++   LPSG +I     G S + 
Sbjct: 421 RSCRQLSPEKWAIVDVSVSVEDSNTEKEASL------LKCRKLPSGCIIEDTSNGHSKVT 474

Query: 344 IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR-HLRQIS--QEVSQPS-----VTG 395
            V+H+D+   +V  + R L  +      +  +A L+ H  ++      + P+     VT 
Sbjct: 475 WVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSLGVTT 534

Query: 396 WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGVQ 452
              R + L+ ++QR+++ F  A+   +   W+ + +    D+ V    +   P +  GV 
Sbjct: 535 LAGRKSVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQDMRVSSRKNLHDPGEPTGV- 592

Query: 453 LSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAG 510
                        ++CA +S+ L  V PA+L  F R+   R EW     DA S  A    
Sbjct: 593 -------------IVCASSSLWLP-VSPALLFDFFRDEARRHEW-----DALSNGAHVQS 633

Query: 511 PCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM-PSDIFLLQLCSG 569
             +L   +  + G  V +    +   E+ + V++  +   Y   ++  P DI        
Sbjct: 634 IANL--SKGQDRGNSVAIQTVKS--REKSIWVLQDSSTNSYESVVVYAPVDI-------- 681

Query: 570 VDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
                  N  +LV A  D S   +  I+PSGF IIP
Sbjct: 682 -------NTTQLVLAGHDPS---NIQILPSGFSIIP 707


>gi|12324584|gb|AAG52245.1|AC011717_13 homeobox protein (GLABRA2); 66648-63167 [Arabidopsis thaliana]
 gi|1695244|gb|AAC80260.1| homeodomain protein [Arabidopsis thaliana]
          Length = 745

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 144/636 (22%), Positives = 258/636 (40%), Gaps = 117/636 (18%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           KY R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K  
Sbjct: 102 KYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAI 157

Query: 84  -QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV-------SQLVYENTFFRQQTQN-AA 134
            +R E S L+A   KL   NK + E   +              L  EN+  + +     A
Sbjct: 158 QERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGPDDLHLENSKLKAELDKLRA 217

Query: 135 TLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKAT------ 188
            L  T    ++  +  Q H                 G+ ++ +  + E  ++AT      
Sbjct: 218 ALGRTPYPLQASCSDDQEHRLGSLDFY--------TGVFALEKSRIAEISNRATLELQKM 269

Query: 189 GTAVEWVQMPGMKPGPDSIGI------------VAISHGCTGVAARACGLVGLDPTRVAE 236
            T+ E + +  ++ G + +               +     T  A+R  G+V +D  ++A+
Sbjct: 270 ATSGEPMWLRSVETGREILNYDEYLKEFPQAQASSFPGRKTIEASRDAGIVFMDAHKLAQ 329

Query: 237 ILKDRPSWYRD----CRSVEVVNVL-----PTGSSGTIELLYMQLYAPTTLAPARDFWLL 287
              D   W             V+V+     P+   G I+L++ ++   T + P R+ + +
Sbjct: 330 SFMDVGQWKETFACLISKAATVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFV 389

Query: 288 RYTSVLEDGSLVVCERSLN----NTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIH 343
           R    L      + + S++    NT+   S+      ++   LPSG +I     G S + 
Sbjct: 390 RSCRQLSPEKWAIVDVSVSVEDSNTEKEASL------LKCRKLPSGCIIEDTSNGHSKVT 443

Query: 344 IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR-HLRQIS--QEVSQPS-----VTG 395
            V+H+D+   +V  + R L  +      +  +A L+ H  ++      + P+     VT 
Sbjct: 444 WVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSLGVTT 503

Query: 396 WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGVQ 452
              R + L+ ++QR+++ F  A+   +   W+ + +    D+ V    +   P +  GV 
Sbjct: 504 LAGRKSVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQDMRVSSRKNLHDPGEPTGV- 561

Query: 453 LSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAG 510
                        ++CA +S+ L  V PA+L  F R+   R EW     DA S  A    
Sbjct: 562 -------------IVCASSSLWLP-VSPALLFDFFRDEARRHEW-----DALSNGAHVQS 602

Query: 511 PCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM-PSDIFLLQLCSG 569
             +L   +  + G  V +    +   E+ + V++  +   Y   ++  P DI        
Sbjct: 603 IANL--SKGQDRGNSVAIQTVKS--REKSIWVLQDSSTNSYESVVVYAPVDI-------- 650

Query: 570 VDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
                  N  +LV A  D S   +  I+PSGF IIP
Sbjct: 651 -------NTTQLVLAGHDPS---NIQILPSGFSIIP 676


>gi|18412529|ref|NP_565223.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
 gi|147744564|sp|P46607.3|HGL2_ARATH RecName: Full=Homeobox-leucine zipper protein GLABRA 2; AltName:
           Full=HD-ZIP protein ATHB-10; AltName:
           Full=Homeobox-leucine zipper protein ATHB-10
 gi|13430764|gb|AAK26004.1|AF360294_1 putative homeobox protein GLABRA2 [Arabidopsis thaliana]
 gi|1212757|emb|CAA91183.1| HD-ZIP [Arabidopsis thaliana]
 gi|20152552|emb|CAD29714.1| homeodomain-leucine zipper 10 [Arabidopsis thaliana]
 gi|25054963|gb|AAN71955.1| putative homeobox protein GLABRA2 [Arabidopsis thaliana]
 gi|332198190|gb|AEE36311.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
          Length = 747

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 144/636 (22%), Positives = 258/636 (40%), Gaps = 117/636 (18%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           KY R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K  
Sbjct: 104 KYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAI 159

Query: 84  -QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV-------SQLVYENTFFRQQTQN-AA 134
            +R E S L+A   KL   NK + E   +              L  EN+  + +     A
Sbjct: 160 QERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGPDDLHLENSKLKAELDKLRA 219

Query: 135 TLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKAT------ 188
            L  T    ++  +  Q H                 G+ ++ +  + E  ++AT      
Sbjct: 220 ALGRTPYPLQASCSDDQEHRLGSLDFY--------TGVFALEKSRIAEISNRATLELQKM 271

Query: 189 GTAVEWVQMPGMKPGPDSIGI------------VAISHGCTGVAARACGLVGLDPTRVAE 236
            T+ E + +  ++ G + +               +     T  A+R  G+V +D  ++A+
Sbjct: 272 ATSGEPMWLRSVETGREILNYDEYLKEFPQAQASSFPGRKTIEASRDAGIVFMDAHKLAQ 331

Query: 237 ILKDRPSWYRD----CRSVEVVNVL-----PTGSSGTIELLYMQLYAPTTLAPARDFWLL 287
              D   W             V+V+     P+   G I+L++ ++   T + P R+ + +
Sbjct: 332 SFMDVGQWKETFACLISKAATVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFV 391

Query: 288 RYTSVLEDGSLVVCERSLN----NTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIH 343
           R    L      + + S++    NT+   S+      ++   LPSG +I     G S + 
Sbjct: 392 RSCRQLSPEKWAIVDVSVSVEDSNTEKEASL------LKCRKLPSGCIIEDTSNGHSKVT 445

Query: 344 IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR-HLRQIS--QEVSQPS-----VTG 395
            V+H+D+   +V  + R L  +      +  +A L+ H  ++      + P+     VT 
Sbjct: 446 WVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSLGVTT 505

Query: 396 WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGVQ 452
              R + L+ ++QR+++ F  A+   +   W+ + +    D+ V    +   P +  GV 
Sbjct: 506 LAGRKSVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQDMRVSSRKNLHDPGEPTGV- 563

Query: 453 LSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAG 510
                        ++CA +S+ L  V PA+L  F R+   R EW     DA S  A    
Sbjct: 564 -------------IVCASSSLWLP-VSPALLFDFFRDEARRHEW-----DALSNGAHVQS 604

Query: 511 PCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM-PSDIFLLQLCSG 569
             +L   +  + G  V +    +   E+ + V++  +   Y   ++  P DI        
Sbjct: 605 IANL--SKGQDRGNSVAIQTVKS--REKSIWVLQDSSTNSYESVVVYAPVDI-------- 652

Query: 570 VDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
                  N  +LV A  D S   +  I+PSGF IIP
Sbjct: 653 -------NTTQLVLAGHDPS---NIQILPSGFSIIP 678


>gi|338797897|gb|AEI99592.1| HD-Zip IV transcription factor GL9 [Triticum aestivum]
          Length = 670

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 136/631 (21%), Positives = 239/631 (37%), Gaps = 128/631 (20%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---R 85
           R  P+Q + LE  +  C  P   +R  L       + +  +Q+K WFQN+R   K    +
Sbjct: 45  RLNPQQTQVLEGFFSICAHPDENQRMGLSES----TGLSMQQVKFWFQNKRTYMKHLTGK 100

Query: 86  KEASRLQAVNRKLTAMNKLLM---------------------------EENDRLQKQVSQ 118
           +E+ R++A N  L   NK L                            EEN+ L++QVSQ
Sbjct: 101 EESYRMKAQNEMLREENKRLASAAKASFCPSCVALPGQNPSVEVQRLKEENESLRQQVSQ 160

Query: 119 LVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEE 178
           L  E       T N         +   +V +  H      +   P     P G L     
Sbjct: 161 LRAEAHQLDPSTVNIIGRENDIDAIAELVQNAMHEFVVLSESGGPLWMPVPGGSL----- 215

Query: 179 TLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEIL 238
              + L+K     V + Q  G +   ++IG           A RA G+V ++  ++ + +
Sbjct: 216 ---DLLNK-----VAYAQTFGARSSANAIGFRV-------EATRADGMVMMEAKQIVDYI 260

Query: 239 KDRPSWYRDC----RSVEVVNVL--PT--GSSGTIELLYMQLYAPTTLAPARDFWLLRYT 290
            D   +   C     S +   +   PT  G +G + L+  +   P+ L P+R    +R  
Sbjct: 261 MDSECYTSFCPGTLTSAKTTKIYKWPTNAGYNGAMHLMTAETVFPSPLVPSRKCTFVRCC 320

Query: 291 SVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDL 350
             +++G++++ + SL+N            F +   +PSG LIR      S + +++H+ +
Sbjct: 321 RGMQNGTVIIVDVSLDNGDG--------TFFKCRKMPSGLLIRSLNSDASQVTVIEHVQV 372

Query: 351 EPWSVPEVLRPLYESSTLIAQK------TTMAALRHLRQISQEVSQPSVTGWGRRPAALR 404
               V E+ RP        A++         A +R L  ++Q  S  ++ G       L 
Sbjct: 373 NDAGVHELYRPTLSGLMFGARRWLSSIERQSARMRDLFLLTQSTSAANMNG----RKTLM 428

Query: 405 ALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSN 464
            ++  L  G+   +       W++L   G +D              ++++Y         
Sbjct: 429 KIADDLLAGYANGIAAVPGGRWTILRGAGTED-------------DIRVTYRRKDDDDDT 475

Query: 465 AVLCAKASMLLQDVPPAILLRFLR--EHRSEWADSSIDAYSA---AAVKAGPCSLPVPRA 519
           AV+   A+  L  +P  +    LR  + R +W D  ++  S     AV  G         
Sbjct: 476 AVVSVCAAFHLP-LPLRMAFDLLRNIQLRPKW-DVLVNGNSVREEVAVCKG--------V 525

Query: 520 GNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM---PSDIFLLQLCSGVDENAVG 576
           G F    IL + H  E+ E   ++ L+N  +      M   P DI L+            
Sbjct: 526 GGFDDVSILHIKHNAENNE--NIMILQNSGYDVSGAFMIYCPVDIQLMN----------- 572

Query: 577 NCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
                + +P D   S+   + P+GF ++P+D
Sbjct: 573 ----EIMSPSDMGESNKVSLYPTGFSLLPVD 599


>gi|357124875|ref|XP_003564122.1| PREDICTED: homeobox-leucine zipper protein ROC8-like [Brachypodium
           distachyon]
          Length = 714

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 166/691 (24%), Positives = 260/691 (37%), Gaps = 154/691 (22%)

Query: 14  DSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKV 73
           DS GQ+      +Y R+TP Q++ LE ++ ECP P   +R QL RE      +E +QIK 
Sbjct: 12  DSHGQQQNNRRKRYHRHTPRQIQTLEGMFKECPHPDENQRAQLSREL----GLEARQIKF 67

Query: 74  WFQNRRCREK---QRKEASRLQAVN----------------------------------R 96
           WFQNRR + K   +R +   L+A N                                  +
Sbjct: 68  WFQNRRTQMKAQHERADNCFLRAENDKIRCENIAMGEALKNVICPTCGGPPVGEDFFDEQ 127

Query: 97  KLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATT--DTSCESVVTSGQHHL 154
           KL   N  L EE DR+    S+ +       Q       L+    D S  S+   GQ   
Sbjct: 128 KLRMENARLKEELDRVSSVASKFLGRPYSMSQMPHGTPPLSVNSLDLSMGSLGMGGQPLG 187

Query: 155 TPQQQHQHPPRDASPAG--------------------LLSIAEETLTEFLSKATGTAVEW 194
                    P+D    G                    +  IA   + E +  A      W
Sbjct: 188 VGGLGGGPTPQDLELLGSSEIPQFQMPAPVSEMERPVMAGIAARAMDEVIRLANAGEHVW 247

Query: 195 VQMPGM----------------KPGPDS---IGIVAISHGCTGVAARACGLVGLDPTRVA 235
           +++PG                 KPG  S    G V +         R C  V +    + 
Sbjct: 248 IKVPGGDGYETLNVDTYDSLFGKPGSSSSFRAGDVRVE------GTRHCAHVFMSAAPLV 301

Query: 236 EILKDRPSWYR-------DCRSVE-VVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLL 287
           E+  D   W         + R+V+ +VN L  G S ++ L+Y +++  T L  +R+F  L
Sbjct: 302 EVFMDTNKWMEFFPSIVANARTVDNLVNGL-DGRSESLILMYEEMHMLTPLVQSREFSFL 360

Query: 288 RYTSVLEDGSLVVCERSLNNTQNGP-SMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVD 346
           RY   ++ G   + + S+   ++    +P      R+  LPSG LI     G S +  V+
Sbjct: 361 RYCRQIDQGLWAIADVSVETERDAQFGVPS-----RSRRLPSGCLIADMANGYSKVTWVE 415

Query: 347 HMDLEPWSVPEVL-RPLYESSTLIAQKTTMAALRH---------LRQISQEVSQPSVTGW 396
           HM++E      VL R +  S      +  + AL +            +       +VT  
Sbjct: 416 HMEIEDKGPIGVLYRDMVTSGAGFGAQRWLGALSNACDRYGALAALAVMNAADLGAVTAD 475

Query: 397 GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYV 456
           GRR  ++  LSQR+   F  AL       W+ +   G +D+ V V+          L  V
Sbjct: 476 GRR--SMMKLSQRMVANFCGALTANQLIVWTTIPG-GANDMNVRVS----------LHRV 522

Query: 457 NGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEWADSSIDAYSAAAVKAGPCSL 514
           +  P + N V+ + A+ +   VP   +  FLR+   R++W     D  +        C  
Sbjct: 523 DE-PGLPNGVVLSAATSVWLPVPCDHVFVFLRDVNTRNQW-----DVLTHGNTVQEACR- 575

Query: 515 PVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENA 574
            +P   +    V L       H+  L +         +E    PS   L+   S +D  A
Sbjct: 576 -IPNGSDPANCVTLLRGVNASHDSMLVL---------QESCADPSGSMLVY--SPIDMPA 623

Query: 575 VGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
           V     LV +  D +   + P++PSGF I+P
Sbjct: 624 V----NLVTSGEDTA---NIPLLPSGFIILP 647


>gi|357453445|ref|XP_003596999.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355486047|gb|AES67250.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 787

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 132/570 (23%), Positives = 220/570 (38%), Gaps = 143/570 (25%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 84
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 162

Query: 85  ---------RKEASRLQAVNRKL---------------TAMNKLLMEENDRLQKQVSQLV 120
                    R E  +L+A N +                TA+ ++  +E+         L 
Sbjct: 163 QERHENTSLRTENEKLRADNMRFREALSNASCPNCGGPTAIGEMSFDEH--------HLR 214

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHP----------------- 163
            EN+  R++    + +A      + VV+     L+P      P                 
Sbjct: 215 IENSRLREEIDRISAIAAKYVG-KPVVSYPL--LSPSSVPPRPLELGIGGFGGQPGMGGD 271

Query: 164 -------------PRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPG------- 203
                        P +A    ++ +A   + E +  A      W  +P ++ G       
Sbjct: 272 MYGAGDLLRSISGPTEADKPMIIELAVAAMEELIGMAQMGDPLW--LPTLEGGSILNEEE 329

Query: 204 -----PDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVV 254
                P  IG       C   A+R   +V ++   + EIL D   W      +      +
Sbjct: 330 YVRSFPRGIGPKPAGFKCE--ASRESSVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTL 387

Query: 255 NVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQN 310
            VL TG +G     ++++  +L  P+ L P R+ + +RY     DG+  V + SL+N + 
Sbjct: 388 EVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRP 447

Query: 311 GPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIA 370
            PS        R+   PSG LI+    G S +  V+H++++   V  + + L  S     
Sbjct: 448 SPS-------ARSRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFG 500

Query: 371 QKTTMAAL-RHLRQISQEVSQ--PSV------------------TGWGRRPAALRALSQR 409
            K  +A L R   +++  ++   P+V                  T    R + L+ L++R
Sbjct: 501 AKRWIATLDRQCERLASAMATNIPTVDMEFFMINEHYDIVMLVITNQDGRKSMLK-LAER 559

Query: 410 LSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAV 466
           +   F   ++  T   W+ L   G DDV V    S   P +  G+              V
Sbjct: 560 MCISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPAGI--------------V 605

Query: 467 LCAKASMLLQDVPPAILLRFLREH--RSEW 494
           L A  S  L  VPP  +  FLR+   RSEW
Sbjct: 606 LSAATSFWLP-VPPKRVFEFLRDENSRSEW 634


>gi|225442611|ref|XP_002284502.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Vitis
           vinifera]
          Length = 754

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 133/646 (20%), Positives = 245/646 (37%), Gaps = 129/646 (19%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 102 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 157

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDR----------------LQKQVSQLVYENTFFR 127
           +R E S L++   KL   NK + E   +                +  +  QL  EN   +
Sbjct: 158 ERHENSLLKSEMEKLRDENKAMRETIKKSCCPNCGSATSSRDPTMTTEEQQLRIENARLK 217

Query: 128 QQTQNAATLA-----TTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTE 182
            + +    +       T +   S      H      +          + ++ I  + + E
Sbjct: 218 AEVEKLRAVIGKYPPGTGSPSSSCSAGNDHENRSSLEFYTGIFGLEKSRIMEIVNQAMEE 277

Query: 183 FLSKATGTAVEWVQMPGMKPGPDSIGI------VAISHGCTG------VAARACGLVGLD 230
               AT     W++   ++ G + +         ++ +   G       A+R  G+V +D
Sbjct: 278 LKKMATAGEPLWIR--SVETGREILNYDEYMREFSVENSGNGRPKRSIEASRETGVVFVD 335

Query: 231 PTRVAEILKDRPSWYR----DCRSVEVVNVLPTGS----SGTIELLYMQLYAPTTLAPAR 282
             R+ +   D   W             V+++  G     +G ++L++ +L   T + P R
Sbjct: 336 LPRLVQSFMDVNQWKEMFPCTISKAATVDIICNGEGPNRNGAVQLMFAELQMLTPMVPTR 395

Query: 283 DFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSII 342
           + + +R+   L      + + S++  ++          V+    PSG +I     G   +
Sbjct: 396 EVYFVRFCKQLSADQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIEDKSNGHCKV 451

Query: 343 HIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR---------HLRQISQEVSQPSV 393
             V+H++ +  +V  + R +  S      K  +A L+             +  + S    
Sbjct: 452 IWVEHLECQKSTVHTMYRQIVNSGLAFGAKHWIATLQLQCERLVFFMATNVPTKDSSGVA 511

Query: 394 TGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMG 450
           T  GR+  ++  L+QR++  F  AL   +   W+ + S   DD+ V    +   P +  G
Sbjct: 512 TLAGRK--SILKLAQRMTWSFCRALGASSFNSWTKVSSKTGDDIRVASRKNLNDPGEPQG 569

Query: 451 VQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVK 508
           V              +LCA +S+ L  V P ++  FLR+   RSEW            + 
Sbjct: 570 V--------------ILCAVSSVWL-PVAPHVIFDFLRDEARRSEW---------DIMLS 605

Query: 509 AGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 568
            GP               +  +A+  + ++    + ++ M      M +  D      C+
Sbjct: 606 GGP---------------VQSIANLAKGQDRGNAVTIQTMKSKDNSMWVVQDT-----CT 645

Query: 569 GVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIP 605
              E+ V      V+AP+D            S    I+PSGF I+P
Sbjct: 646 NAYESMV------VYAPVDIPGMQSVMTGCDSSSIAILPSGFSILP 685


>gi|297743262|emb|CBI36129.3| unnamed protein product [Vitis vinifera]
          Length = 750

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 133/646 (20%), Positives = 245/646 (37%), Gaps = 129/646 (19%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 98  YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 153

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDR----------------LQKQVSQLVYENTFFR 127
           +R E S L++   KL   NK + E   +                +  +  QL  EN   +
Sbjct: 154 ERHENSLLKSEMEKLRDENKAMRETIKKSCCPNCGSATSSRDPTMTTEEQQLRIENARLK 213

Query: 128 QQTQNAATLA-----TTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTE 182
            + +    +       T +   S      H      +          + ++ I  + + E
Sbjct: 214 AEVEKLRAVIGKYPPGTGSPSSSCSAGNDHENRSSLEFYTGIFGLEKSRIMEIVNQAMEE 273

Query: 183 FLSKATGTAVEWVQMPGMKPGPDSIGI------VAISHGCTG------VAARACGLVGLD 230
               AT     W++   ++ G + +         ++ +   G       A+R  G+V +D
Sbjct: 274 LKKMATAGEPLWIR--SVETGREILNYDEYMREFSVENSGNGRPKRSIEASRETGVVFVD 331

Query: 231 PTRVAEILKDRPSWYR----DCRSVEVVNVLPTGS----SGTIELLYMQLYAPTTLAPAR 282
             R+ +   D   W             V+++  G     +G ++L++ +L   T + P R
Sbjct: 332 LPRLVQSFMDVNQWKEMFPCTISKAATVDIICNGEGPNRNGAVQLMFAELQMLTPMVPTR 391

Query: 283 DFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSII 342
           + + +R+   L      + + S++  ++          V+    PSG +I     G   +
Sbjct: 392 EVYFVRFCKQLSADQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIEDKSNGHCKV 447

Query: 343 HIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR---------HLRQISQEVSQPSV 393
             V+H++ +  +V  + R +  S      K  +A L+             +  + S    
Sbjct: 448 IWVEHLECQKSTVHTMYRQIVNSGLAFGAKHWIATLQLQCERLVFFMATNVPTKDSSGVA 507

Query: 394 TGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMG 450
           T  GR+  ++  L+QR++  F  AL   +   W+ + S   DD+ V    +   P +  G
Sbjct: 508 TLAGRK--SILKLAQRMTWSFCRALGASSFNSWTKVSSKTGDDIRVASRKNLNDPGEPQG 565

Query: 451 VQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVK 508
           V              +LCA +S+ L  V P ++  FLR+   RSEW            + 
Sbjct: 566 V--------------ILCAVSSVWL-PVAPHVIFDFLRDEARRSEW---------DIMLS 601

Query: 509 AGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 568
            GP               +  +A+  + ++    + ++ M      M +  D      C+
Sbjct: 602 GGP---------------VQSIANLAKGQDRGNAVTIQTMKSKDNSMWVVQDT-----CT 641

Query: 569 GVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIP 605
              E+ V      V+AP+D            S    I+PSGF I+P
Sbjct: 642 NAYESMV------VYAPVDIPGMQSVMTGCDSSSIAILPSGFSILP 681


>gi|163860158|gb|ABY41242.1| homeodomain protein HOX1 [Gossypium arboreum]
          Length = 753

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 144/655 (21%), Positives = 253/655 (38%), Gaps = 148/655 (22%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 101 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 156

Query: 84  QRKEASRLQAVNRKLTAMNKLLME----------------ENDRLQKQVSQLVYENTFFR 127
           +R E S L+    KL   NK + E                ++  +  +  QL  EN   +
Sbjct: 157 ERHENSLLKQELEKLRDENKAMRETINKACCLNCGMATTAKDGSITAEEQQLRIENAKLK 216

Query: 128 QQTQNAATL-------ATTDTSCESVVTSGQHHLTPQQQHQHPPRD-------ASPAGLL 173
            + +   T+       A+T  SC S             Q      D          + ++
Sbjct: 217 AEVEKLRTVIGKYPPGASTTGSCSS----------GNDQENRSSLDFYTGIFGLEKSRIM 266

Query: 174 SIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGI------VAISHGCTG------VAA 221
            I  + + E    AT     WV+   ++ G + +         ++     G       A+
Sbjct: 267 EIVNQAMEELQKMATAGEPLWVR--SVETGREILNYDEYVKEFSVESSSNGRPKRSIEAS 324

Query: 222 RACGLVGLDPTRVAEILKDRPSWYR--DC--RSVEVVNVLPTG----SSGTIELLYMQLY 273
           R  G+V LD  R+ +   D   W     C       V+V+  G     +G ++L++ +L 
Sbjct: 325 RETGVVFLDLPRLVQSFMDANQWKEMFPCIISKAATVDVICHGEAPNKNGAVQLMFAELQ 384

Query: 274 APTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIR 333
             T L P R+ + +RY   L      + + S++  +           V+    PSG +I+
Sbjct: 385 MLTPLVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENID----ASLVKCRKRPSGCIIQ 440

Query: 334 PCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-----ISQEV 388
               G   +  V+H + +  +V  + R +  S      +  MA L+H  +     ++  V
Sbjct: 441 DTTNGHCKVIWVEHXECQKNTVHTLYRTIVRSGLAFGARHWMATLQHQCEGLFFFMATNV 500

Query: 389 SQPSVTG----WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS 444
                TG     GR+  ++  L+QR++  F  ++   +   W+ + +   +DV V    +
Sbjct: 501 PTKDSTGVATLAGRK--SILKLAQRMTWSFCHSIGASSYHTWNKVSTKTGEDVRVSSRKN 558

Query: 445 ---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSI 499
              P +  GV              ++CA +S+ L  V P +L  FLR+   RSEW     
Sbjct: 559 LNDPGEPHGV--------------IVCAVSSVCL-PVSPTLLFDFLRDESRRSEW----- 598

Query: 500 DAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           D  S      GP               +  +A+  + ++    + ++ M      M +  
Sbjct: 599 DIMS----NGGP---------------VQSIANLAKGKDRGNAVTIQAMKSKENSMWILQ 639

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRIIP 605
           D      C+   E+ V      VFA +D +          S +  I+PSGF I+P
Sbjct: 640 DS-----CTNAFESMV------VFAHVDVTGIQSVITGCDSSNMAILPSGFSILP 683


>gi|22475195|gb|AAM97321.1| homeodomain protein GhHOX1 [Gossypium hirsutum]
          Length = 753

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 143/655 (21%), Positives = 255/655 (38%), Gaps = 148/655 (22%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 101 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 156

Query: 84  QRKEASRLQAVNRKLTAMNKLLME----------------ENDRLQKQVSQLVYENTFFR 127
           +R E S L+    KL   NK + E                ++  +  +  QL  EN   +
Sbjct: 157 ERHENSLLKQELDKLRDENKAMRETINKACCLNCGMATTAKDGSITAEEQQLRIENAKLK 216

Query: 128 QQTQNAATL-------ATTDTSCESVVTSGQHHLTPQQQHQHPPRD-------ASPAGLL 173
            + +   T+       A+T  SC S             Q      D          + ++
Sbjct: 217 AEVEKLRTVIGKYPPGASTTGSCSS----------GNDQENRSSLDFYTGIFGLEKSRIM 266

Query: 174 SIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGI------VAISHGCTG------VAA 221
            I  + + E    AT     WV+   ++ G + +        +++     G       A+
Sbjct: 267 EIVNQAMEELQKMATAGEPLWVR--SVETGREILNYDEYVKELSVESSSNGRPKRSIEAS 324

Query: 222 RACGLVGLDPTRVAEILKDRPSWYR--DC--RSVEVVNVLPTG----SSGTIELLYMQLY 273
           R  G+V LD  R+ +   D   W     C       V+V+  G     +G ++L++ +L 
Sbjct: 325 RETGVVFLDLPRLVQSFMDANQWKEMFPCIISKAATVDVICHGEAPNKNGAVQLMFAELQ 384

Query: 274 APTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIR 333
             T L P R+ + +RY   L      + + S++  +           V+    PSG +I+
Sbjct: 385 MLTPLVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENID----ASLVKCRKRPSGCIIQ 440

Query: 334 PCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-----ISQEV 388
               G   +  V+H++ +  +V  + R +  S      +  MA L+H  +     ++  V
Sbjct: 441 DTTNGHCKVIWVEHLECQKNTVHTLYRTIVRSGLAFGARHWMATLQHQCERLVFFMATNV 500

Query: 389 SQPSVTG----WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS 444
                TG     GR+  ++  L+QR++  F  ++   +   W+ + +   +D+ V    +
Sbjct: 501 PTKDSTGVATLAGRK--SILKLAQRMTWSFCHSIGASSYHTWNKVSTKTGEDIRVSSRKN 558

Query: 445 ---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSI 499
              P +  GV              ++CA +S+ L  V P +L  FLR+   RSEW     
Sbjct: 559 LNDPGEPHGV--------------IVCAVSSVWL-PVSPTLLFDFLRDESRRSEW----- 598

Query: 500 DAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           D  S      GP               +  +A+  + ++    + ++ M      M +  
Sbjct: 599 DIMS----NGGP---------------VQSIANLAKGKDRGNAVTIQAMKSKENSMWVLQ 639

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRIIP 605
           D      C+   E+ V      VFA +D +          S +  I+PSGF I+P
Sbjct: 640 DS-----CTNAFESMV------VFAHVDVTGIQSVITGCDSSNMAILPSGFSILP 683


>gi|213950361|gb|ACJ54445.1| GL2a [Brassica rapa]
          Length = 750

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 155/681 (22%), Positives = 272/681 (39%), Gaps = 122/681 (17%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T +Q+  +E L+ E P P   +RQQL  +      + P+Q+K WFQNRR + K   
Sbjct: 100 YHRHTTDQIRHMEALFKETPHPDEKQRQQLSEQL----GLAPRQVKFWFQNRRTQIKAIQ 155

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV-------------SQLVYENTFFRQQT 130
           +R E S L+A   KL   NK + E   +                    L+ ENT  + + 
Sbjct: 156 ERHENSLLKAELEKLREENKAMRESFSKANSSSCLNCGGGGGGGSPDDLLLENTKLKAEL 215

Query: 131 QN-AATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATG 189
               A L  T    ++  +  Q       +          + ++ IA     E    AT 
Sbjct: 216 DKLRAALGRTPYPLQASCSDDQQRRVGSLELYTGVFALEKSRIVEIANRATLELQKMATS 275

Query: 190 TAVEWVQMPGMKPGPDSIGI-----------VAISHGCTGV-AARACGLVGLDPTRVAEI 237
               W++   ++ G + +              +  HG   + A+R  G+V +D  ++A+ 
Sbjct: 276 GEPLWLR--SLETGREILNYDEYLKEFPQDQTSSFHGRKTIEASRDVGIVFMDAHKLAQS 333

Query: 238 LKDRPSWYR--DCRSVEVVNVL-------PTGSSGTIELLYMQLYAPTTLAPARDFWLLR 288
             D   W     C   + V V        P+   G I+L++ ++   T + P R+ + +R
Sbjct: 334 FMDVEQWKEMFACLISKAVTVDVIRQGEGPSRVDGAIQLMFGEMQLLTPVVPTREVYFVR 393

Query: 289 YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHM 348
               L      + + S++  ++  +  +    +R    PSG +I     G S +  V+H+
Sbjct: 394 SCRQLSPEKWAIVDVSVSMEEDNNAEKEGS-LLRCRKRPSGCIIEDTSNGHSKVTWVEHL 452

Query: 349 DLEPWSVPEVLRPLYESSTLIAQKTTMAALR-HLRQIS--QEVSQPS-----VTGWGRRP 400
           DL   +V  + R    +      K  +A L+ H  ++      + P+     VT    R 
Sbjct: 453 DLSASTVQPLFRSFVNTGLAFGAKHWVATLQLHCERLVFFMATNVPTKDSLGVTTLAGRK 512

Query: 401 AALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVN 457
           + L+ ++QR+++ F  A+   +   W+ + +    D+ V    +   P +  GV      
Sbjct: 513 SVLK-MAQRMTQSFYRAIAASSYHQWNKITTKTGQDMRVSSRKNLHDPGEPTGV------ 565

Query: 458 GFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLP 515
                   ++CA +S+ L  V P +L  F R+   R EW     DA S  A      SL 
Sbjct: 566 --------IVCASSSLWL-PVSPTLLFDFFRDETRRHEW-----DALSNGAHVQSIVSL- 610

Query: 516 VPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM--PSDIFLLQLCSGVDEN 573
             +  + G  V +    T++  E    +  ++  +  E +++  P DI            
Sbjct: 611 -SKGQDRGNSVSI---QTVKSREKSTWVLQDSCTNSYESVVVYAPVDI------------ 654

Query: 574 AVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNK 633
              N  ++V A  D S   +  I+P GF IIP   G ++    R L ++SA E       
Sbjct: 655 ---NTTQMVIAGHDPS---NIQILPCGFSIIP--DGVES----RQLVISSAQE------- 695

Query: 634 ASGDSSTQCGSTKSVITIAFQ 654
              D +TQ G   S++T+A Q
Sbjct: 696 --ADRNTQGG---SLLTMALQ 711


>gi|357471231|ref|XP_003605900.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355506955|gb|AES88097.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 734

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 131/552 (23%), Positives = 218/552 (39%), Gaps = 121/552 (21%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 84
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 63  RYHRHTQHQIQEMESFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 118

Query: 85  ---------RKEASRLQAVNRKL---------------TAMNKLLMEENDRLQKQVSQLV 120
                    R +  +L+A N +                TA+ ++  +E+         L 
Sbjct: 119 HERSENSQLRADNEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEH--------HLR 170

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSG-QHHLTPQQQ--HQHP-------------- 163
            EN   R++    +T+A        V  S     L P+ +    +P              
Sbjct: 171 LENARLREEIDRISTMAAKYVGKPVVNYSNISPSLPPRTEIGFGNPQGIGTMDMYGASGD 230

Query: 164 -------PRDASPAGLLSIAEETLTEFLSKAT------------GTAVEWVQMPGMKPGP 204
                  P +A    ++ +A   + E +  A             G A    +   ++  P
Sbjct: 231 ILRSISGPTEADKPIIIELAVAAMEELIGMAQMGDPLWLRTTPEGAATVLNEDEYVRSFP 290

Query: 205 DSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD-----CRSVEVVNVLPT 259
             IG       C   A+R   +V ++   + EIL D   W         R+V  V VL T
Sbjct: 291 RGIGPKPNGFKCE--ASRESSVVIMNHVNLVEILMDVNQWSTVFAGIVSRAV-TVEVLST 347

Query: 260 GSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 315
           G +G     ++++  +   P+ L P R+ + +RY     DG+  V + SL+N +  PS  
Sbjct: 348 GVAGNYNGALQVMTAEFQVPSPLVPTRESYFVRYCKQHPDGTWAVVDVSLDNLRPSPSS- 406

Query: 316 QAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTM 375
                 R    PSG LI+    G S +  V+H++++   V  + + L  +      K  +
Sbjct: 407 ------RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDERGVHNLYKQLVNTGDAFGAKRWV 460

Query: 376 AAL-RHLRQISQEVSQ--PSV-----TGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           A L R   +++  ++   P+V     T    R + L+ L++R+   F   ++  T   W+
Sbjct: 461 ATLDRQCERLASSMATNIPTVDVGVITNQEGRKSMLK-LAERMVISFCGGVSASTAHTWT 519

Query: 428 MLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILL 484
            L   G DDV V    S   P +  G+              VL A  S  L  VPP  + 
Sbjct: 520 TLSGTGADDVRVMTRKSVDDPGRPPGI--------------VLSAATSFWLP-VPPTQVF 564

Query: 485 RFLREH--RSEW 494
            FLR    R+EW
Sbjct: 565 EFLRNENSRTEW 576


>gi|13346176|gb|AAK19610.1|AF336277_1 BNLGHi8377 [Gossypium hirsutum]
          Length = 758

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 143/649 (22%), Positives = 258/649 (39%), Gaps = 136/649 (20%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 106 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 161

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDR----------------LQKQVSQLVYENTFFR 127
           +R E S L+    KL   NK + E  ++                +  +  QL  EN   +
Sbjct: 162 ERHENSLLKQELDKLRDENKAMRETINKACCLNCGMATTAKDGFITAEEQQLRIENAKLK 221

Query: 128 QQTQNAATL-------ATTDTSCESVVTSGQHHLTPQQQHQHPPRDA-SPAGLLSIAEET 179
            + +   T+       A+T  SC    +SG         + +    A   + ++ I  + 
Sbjct: 222 AEVEKLRTVIGKYPPGASTTGSC----SSGNDQENRSSLNFYTGIFALEKSRIMEIVNQA 277

Query: 180 LTEFLSKATGTAVEWVQMPGMKPGPDSIGI------VAISHGCTG------VAARACGLV 227
           + E    AT     WV+   ++ G + +        +++     G       A+R  G+V
Sbjct: 278 MEELQKMATAGEPLWVR--SVETGREILNYDEYVKELSVESSSNGRPKRSIEASRETGVV 335

Query: 228 GLDPTRVAEILKDRPSWYR--DC--RSVEVVNVLPTG----SSGTIELLYMQLYAPTTLA 279
            LD  R+ +   D   W     C       V+V+  G     +G ++L++ +L   T L 
Sbjct: 336 FLDLPRLVQSFMDANQWKEMFPCIISKAATVDVICHGEAPNKNGAVQLMFAELQMLTPLV 395

Query: 280 PARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGG 339
           P R+ + +RY   L      + + S++  +           V+    PSG +I+    G 
Sbjct: 396 PTREVYFVRYCKQLSAEQWAIVDVSIDKVEENID----ASLVKCRKRPSGCIIQDKTNGH 451

Query: 340 SIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-----ISQEVSQPSVT 394
             +  V+H++ +  +V  + R +  S      +  MA L+H  +     ++  V     T
Sbjct: 452 CKVIWVEHLECQKNTVHTLYRTIVRSGLAFGARHWMATLQHQCERLVFFMATNVPTKDST 511

Query: 395 G----WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSK 447
           G     GR+  ++  L+QR++  F  ++   +   W+ + +   +D+ V    +   P +
Sbjct: 512 GVATLAGRK--SILKLAQRMTWSFCHSIGASSYHTWNKVSTKTGEDIRVSSRKNLNDPGE 569

Query: 448 MMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAA 505
             GV              ++CA +S+ L  V P +L  FLR+   RSEW     D  S  
Sbjct: 570 PHGV--------------IVCAVSSVWL-PVSPTLLFDFLRDESRRSEW-----DIMS-- 607

Query: 506 AVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQ 565
               GP               +  +A+  + ++    + ++ M      M +  D     
Sbjct: 608 --NGGP---------------VQSIANLAKGKDQGNAVTIQAMKSKENSMWVLQDS---- 646

Query: 566 LCSGVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRIIP 605
            C+   E+ V      VFA +D +          S +  I+PSGF I+P
Sbjct: 647 -CTNAFESMV------VFAHVDVTGIQSVITGCDSSNMAILPSGFSILP 688


>gi|187611421|sp|Q69T58.2|ROC8_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC8; AltName:
           Full=GLABRA 2-like homeobox protein 8; AltName:
           Full=HD-ZIP protein ROC8; AltName: Full=Homeodomain
           transcription factor ROC8; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 8
          Length = 710

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 138/549 (25%), Positives = 215/549 (39%), Gaps = 105/549 (19%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 84
           +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 18  RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 85  ---------RKEASRLQAVN---------------------------RKLTAMNKLLMEE 108
                    R E  +++  N                           +KL   N  L EE
Sbjct: 74  HERADNCFLRAENDKIRCENIAIREALKNVICPTCGGPPVGEDYFDEQKLRMENARLKEE 133

Query: 109 NDRLQKQVSQLVYENTFFRQ--QTQNAATLATTDTSCESV--------VTSGQHHLTPQQ 158
            DR+    S+  Y    F Q        T+++ D S   +        + SG     P Q
Sbjct: 134 LDRVSNLTSK--YLGRPFTQLPPATPPMTVSSLDLSVGGMGGPSLDLDLLSGGSSGIPFQ 191

Query: 159 QHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK-PGPDSIGIVAI----- 212
               P  D     +  +A   + E +  A      W + PG    G D+   + +     
Sbjct: 192 L-PAPVSDMERPMMAEMATRAMDELIRLAQAGDHIWSKSPGGGVSGGDARETLNVDTYDS 250

Query: 213 -------SHGCTGV---AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLP 258
                  S+    +    +R  GLV +    +A++  D   W     S+      ++VL 
Sbjct: 251 IFSKPGGSYRAPSINVEGSRESGLVLMSAVALADVFMDTNKWMEFFPSIVSKAHTIDVLV 310

Query: 259 TGSSGTIE---LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 315
            G  G  E   L+Y +L+  T   P R+   +RY   +E G   + + S++  ++     
Sbjct: 311 NGMGGRSESLILMYEELHIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGA 370

Query: 316 QAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTLIAQKTT 374
             P   R+  LPSG LI     G S +  V+HM++E  S   VL R L  S         
Sbjct: 371 PPP---RSRRLPSGCLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRW 427

Query: 375 MAAL-----RHLRQISQEVSQ--PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           +AAL     R+   ++  V      VT  G+R  ++  LSQR+   F  +L       W+
Sbjct: 428 LAALQRACERYASLVALGVPHHIAGVTPEGKR--SMMKLSQRMVNSFCSSLGASQMHQWT 485

Query: 428 MLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL 487
            L   G ++V+V V    S             P   N V+ + A+ +   VP   +  F+
Sbjct: 486 TLS--GSNEVSVRVTMHRST-----------DPGQPNGVVLSAATSIWLPVPCDHVFAFV 532

Query: 488 REH--RSEW 494
           R+   RS+W
Sbjct: 533 RDENTRSQW 541


>gi|213950357|gb|ACJ54443.1| GL2a [Brassica napus]
          Length = 750

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 155/682 (22%), Positives = 272/682 (39%), Gaps = 123/682 (18%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 99  YHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 154

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV--------------SQLVYENTFFRQQ 129
           +R E S L+A   KL   NK + E   +                     L  ENT  + +
Sbjct: 155 ERHENSLLKAELEKLREENKAMRESFSKANSSSCPNCGGGGGGGGSPDDLHLENTKLKAE 214

Query: 130 TQNA-ATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKAT 188
                A L  T    ++  +  Q       +          + ++ IA     E    AT
Sbjct: 215 LDKLRAALGRTPYPLQASCSDDQQRRVGSLELYTGVFALEKSRIVEIANRATLELQKMAT 274

Query: 189 GTAVEWVQMPGMKPGPDSIGI-----------VAISHGCTGV-AARACGLVGLDPTRVAE 236
                W++   ++ G + +              +  HG   + A+R  G+V +D  ++A+
Sbjct: 275 SGEPLWLR--SLETGREILNYDEYLKEFPQAQASSFHGRKTIEASRDVGIVFMDAHKLAQ 332

Query: 237 ILKDRPSWYR--DCRSVEVVNVL-------PTGSSGTIELLYMQLYAPTTLAPARDFWLL 287
              D   W     C   + V V        P+   G I+L++ ++   T + P R+ + +
Sbjct: 333 SFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFV 392

Query: 288 RYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDH 347
           R    L      + + S++  ++  +  +    +R    PSG +I     G S +  V+H
Sbjct: 393 RSCRQLSPEKWAIVDVSVSMEEDNNAEKEGS-LLRCRKRPSGCIIEDTSNGHSKVTWVEH 451

Query: 348 MDLEPWSVPEVLRPLYESSTLIAQKTTMAALR-HLRQIS--QEVSQPS-----VTGWGRR 399
           +DL   +V  + R    +      K  +A L+ H  ++      + P+     VT    R
Sbjct: 452 LDLSASTVQPLFRSFVNTGLAFGAKHWVATLQLHCERLVFFMATNVPTKDSLGVTTLAGR 511

Query: 400 PAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYV 456
            + L+ ++QR+++ F  A+   +   W+ + +    D+ V    +   P +  GV     
Sbjct: 512 KSVLK-MAQRMTQSFYRAIAASSYHQWNKITTKTGQDMRVSSRKNLHDPGEPTGV----- 565

Query: 457 NGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSL 514
                    ++CA +S+ L  V P +L  F R+   R EW     DA S  A      SL
Sbjct: 566 ---------IVCASSSLWL-PVSPTLLFDFFRDETRRHEW-----DALSNGAHVQSIVSL 610

Query: 515 PVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM--PSDIFLLQLCSGVDE 572
              +  + G  V +    T++  E    +  ++  +  E +++  P DI           
Sbjct: 611 --SKGQDRGNSVSI---QTVKSREKSTWVLQDSCTNSYESVVVYAPVDI----------- 654

Query: 573 NAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGN 632
               N  ++V A  D S   +  I+P GF IIP   G ++    R L ++SA E      
Sbjct: 655 ----NTTQMVIAGHDPS---NIQILPCGFSIIP--DGVES----RQLVISSAQE------ 695

Query: 633 KASGDSSTQCGSTKSVITIAFQ 654
               D +TQ G   S++T+A Q
Sbjct: 696 ---ADRNTQGG---SLLTMALQ 711


>gi|222635166|gb|EEE65298.1| hypothetical protein OsJ_20535 [Oryza sativa Japonica Group]
          Length = 575

 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 138/549 (25%), Positives = 215/549 (39%), Gaps = 105/549 (19%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 84
           +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 18  RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 85  ---------RKEASRLQAVN---------------------------RKLTAMNKLLMEE 108
                    R E  +++  N                           +KL   N  L EE
Sbjct: 74  HERADNCFLRAENDKIRCENIAIREALKNVICPTCGGPPVGEDYFDEQKLRMENARLKEE 133

Query: 109 NDRLQKQVSQLVYENTFFRQ--QTQNAATLATTDTSCESV--------VTSGQHHLTPQQ 158
            DR+    S+  Y    F Q        T+++ D S   +        + SG     P Q
Sbjct: 134 LDRVSNLTSK--YLGRPFTQLPPATPPMTVSSLDLSVGGMGGPSLDLDLLSGGSSGIPFQ 191

Query: 159 QHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK-PGPDSIGIVAI----- 212
               P  D     +  +A   + E +  A      W + PG    G D+   + +     
Sbjct: 192 L-PAPVSDMERPMMAEMATRAMDELIRLAQAGDHIWSKSPGGGVSGGDARETLNVDTYDS 250

Query: 213 -------SHGCTGV---AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLP 258
                  S+    +    +R  GLV +    +A++  D   W     S+      ++VL 
Sbjct: 251 IFSKPGGSYRAPSINVEGSRESGLVLMSAVALADVFMDTNKWMEFFPSIVSKAHTIDVLV 310

Query: 259 TGSSGTIE---LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 315
            G  G  E   L+Y +L+  T   P R+   +RY   +E G   + + S++  ++     
Sbjct: 311 NGMGGRSESLILMYEELHIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGA 370

Query: 316 QAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTLIAQKTT 374
             P   R+  LPSG LI     G S +  V+HM++E  S   VL R L  S         
Sbjct: 371 PPP---RSRRLPSGCLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRW 427

Query: 375 MAAL-----RHLRQISQEVSQ--PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           +AAL     R+   ++  V      VT  G+R  ++  LSQR+   F  +L       W+
Sbjct: 428 LAALQRACERYASLVALGVPHHIAGVTPEGKR--SMMKLSQRMVNSFCSSLGASQMHQWT 485

Query: 428 MLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL 487
            L   G ++V+V V    S             P   N V+ + A+ +   VP   +  F+
Sbjct: 486 TLS--GSNEVSVRVTMHRST-----------DPGQPNGVVLSAATSIWLPVPCDHVFAFV 532

Query: 488 REH--RSEW 494
           R+   RS+W
Sbjct: 533 RDENTRSQW 541


>gi|449466649|ref|XP_004151038.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 777

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 141/674 (20%), Positives = 264/674 (39%), Gaps = 155/674 (22%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           KY R+T EQ+  +E L+ E P P   +RQQL +       + P+Q+K WFQNRR      
Sbjct: 111 KYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRL----GLSPRQVKFWFQNRR------ 160

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAA---TLATTDTS 142
              ++++A+  +          EN  L+ ++ +L  EN   R+ ++         T D +
Sbjct: 161 ---TQIKAIQER---------HENTLLKAEMEKLREENKAMREISKKKIGCPNCGTADAT 208

Query: 143 CESVVTSGQHHLTPQQQH-------------QHPPRDASPAGLLSIAEETLT-----EFL 184
            + +V +    L  +                ++P   ASP+   S  E+  +     +F 
Sbjct: 209 QDDLVFTTTEQLRIKNAKLKAEVEKLRAALGKYPQAAASPSTYSSGNEQETSNRICLDFY 268

Query: 185 SKATG-----------TAVEWVQMPGMKPGPDSIGIVAISHG------------------ 215
           +   G            AVE  ++  M    D + + ++  G                  
Sbjct: 269 TGIFGLENSRIMEKVDEAVE--ELKTMAAAGDPLWVRSVETGREILNYDEYLKTFQFSNN 326

Query: 216 ------CTGV---AARACGLVGLDPTRVAEILKDRPSWYRD----CRSVEVVNVLPTG-- 260
                 C      A+R   LV ++P+R+ +   D   W             V+V+  G  
Sbjct: 327 NSNTRNCLKTHIEASRETALVFMEPSRLVQSFMDENQWKEMFPFMISKAATVDVICNGEA 386

Query: 261 ---SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQA 317
              ++G ++L++ ++   T L P R+ + +R+   L+     + + S+ N ++       
Sbjct: 387 AKWNNGAVQLMFAEVQMLTPLVPTREMYFIRHCKQLDAEQWAIVDVSIENVEDNNI---D 443

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
              V+    PSG +I+    G   + +V+H++     V  + R +  + T    +  MA 
Sbjct: 444 VSLVKYRKRPSGCIIKDESNGHCKVTMVEHLECVKNKVHNLYRSIVNNGTAFGARHWMAT 503

Query: 378 L-----RHLRQISQEVSQPSVTG---WGRRPAALRALSQRLSRGFNEALNGFTDEGWSML 429
           L     R    ++  +     TG      R + L+ L+QR+S  F++A+   + + W+ +
Sbjct: 504 LQLQCERSAFFMATNIPMKDSTGVSTLAGRKSTLK-LAQRMSCSFSQAVAASSYQTWTKV 562

Query: 430 ESDGIDDVTVHVN---SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
                +D+ V      S P + +GV              +LCA +S+ L  + P +L  F
Sbjct: 563 VGKSGEDIRVCSRKNLSDPGEPIGV--------------ILCAVSSLWLP-LSPHLLFDF 607

Query: 487 LREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIK 544
            R+   RS+W D+      A  +        + +  + G  V +    + E+      I 
Sbjct: 608 FRDESRRSQW-DAMFGGDKAKTIA------NLAKGQDRGNSVTIQTIGSKENNNNNMWIL 660

Query: 545 LENMAHYREDMIMPS--DIFLLQ-LCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGF 601
            ++  +  E M++ S  D+  +Q + SG D  +V                    I+PSGF
Sbjct: 661 QDSSTNSSESMVVYSGVDVTSMQSVMSGCDSGSV-------------------TILPSGF 701

Query: 602 RIIPLDSGKDTPSP 615
            I+P   G D+  P
Sbjct: 702 SILP--DGADSRPP 713


>gi|302398859|gb|ADL36724.1| HD domain class transcription factor [Malus x domestica]
          Length = 761

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 138/660 (20%), Positives = 259/660 (39%), Gaps = 159/660 (24%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 86
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR       
Sbjct: 110 YHRHTTEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRR------- 158

Query: 87  EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAA--TLATTDTSCE 144
             ++++A+  +          EN  L+ ++ +L  E+   R+Q   A      T  TS +
Sbjct: 159 --TQIKAIQER---------HENSLLKGEMEKLRDESKAMREQINKACCPNCGTATTSRD 207

Query: 145 SVVTSGQHHLTPQQQH-------------QHPPRDASPA-----------------GLLS 174
           + +T+ +  L  +                ++PP  +SP+                 G+  
Sbjct: 208 ATLTTEEQQLRIENARLKSEVEKLRAALVKYPPGTSSPSCSAGQDQENRSSLDFYTGIFG 267

Query: 175 IAEETLTEFLSKA------TGTAVEWVQMPGMKPGPDSIG----IVAISHGCTG------ 218
           + E  + E +++A        TA E + +  ++ G + +     I   +    G      
Sbjct: 268 LEESRIMEIVNQAMEELQKMATAGEPLWVRSVETGREILNYDEYIKEFNIEVPGNGRPKR 327

Query: 219 --VAARACGLVGLDPTRVAEILKDRPSWYR--DC--RSVEVVNVLPTGS----SGTIELL 268
              A+R  GLV +D  R+ +   D   W     C       V+V+  G     +G ++L+
Sbjct: 328 SIEASRETGLVFVDLPRLVQSFMDVNQWKEMFPCMISKAATVDVINNGEGDDRNGAVQLM 387

Query: 269 YMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPS 328
           + +L   T L P R+ + +R    L      + + S++  ++          V+    PS
Sbjct: 388 FAELQMLTPLVPTREVYFVRCCKQLSPEQWAIVDVSIDKVEDNID----ASLVKCRKRPS 443

Query: 329 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR--------- 379
           G +I     G   +  V+H++ +  ++  + R +  S      +  +A L+         
Sbjct: 444 GCIIEDKTNGHCKVIWVEHLECQRSTIQTMYRTIVNSGLAFGARHWVATLQLQCERLVFF 503

Query: 380 HLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTV 439
               +  + S    T  GR+  ++  L+QR++  F  A+   +   W+ + S   DD+ +
Sbjct: 504 MATNVPMKDSAGVATLAGRK--SILKLAQRMTASFCRAIGASSYHTWTKISSKTGDDIRI 561

Query: 440 ---HVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
                ++ P + +GV              +LCA +S+ L  V P +L  FLR+   R+EW
Sbjct: 562 ASRKNSNDPGEPLGV--------------ILCAVSSVWLP-VSPYLLFDFLRDETRRNEW 606

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
                       +  GP             Q I  L+   + ++    + +++M      
Sbjct: 607 ---------DIMLNGGP------------AQTIANLS---KGQDRGNAVTIQSMKSKENS 642

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIP 605
           M +  D      C    E+ V      V+AP+D            + +  I+PSGF I+P
Sbjct: 643 MWILQDT-----CINSYESMV------VYAPVDIPGMQSVMTGCDASNIAILPSGFSILP 691


>gi|51091201|dbj|BAD35894.1| putative homeobox [Oryza sativa Japonica Group]
          Length = 734

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 203/509 (39%), Gaps = 92/509 (18%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 84
           +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 18  RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 85  ---------RKEASRLQAVN---------------------------RKLTAMNKLLMEE 108
                    R E  +++  N                           +KL   N  L EE
Sbjct: 74  HERADNCFLRAENDKIRCENIAIREALKNVICPTCGGPPVGEDYFDEQKLRMENARLKEE 133

Query: 109 NDRLQKQVSQLVYENTFFRQ--QTQNAATLATTDTSCESV--------VTSGQHHLTPQQ 158
            DR+    S+  Y    F Q        T+++ D S   +        + SG     P Q
Sbjct: 134 LDRVSNLTSK--YLGRPFTQLPPATPPMTVSSLDLSVGGMGGPSLDLDLLSGGSSGIPFQ 191

Query: 159 QHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK-PGPDSIGIVAI----- 212
               P  D     +  +A   + E +  A      W + PG    G D+   + +     
Sbjct: 192 L-PAPVSDMERPMMAEMATRAMDELIRLAQAGDHIWSKSPGGGVSGGDARETLNVDTYDS 250

Query: 213 -------SHGCTGV---AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLP 258
                  S+    +    +R  GLV +    +A++  D   W     S+      ++VL 
Sbjct: 251 IFSKPGGSYRAPSINVEGSRESGLVLMSAVALADVFMDTNKWMEFFPSIVSKAHTIDVLV 310

Query: 259 TGSSGTIE---LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 315
            G  G  E   L+Y +L+  T   P R+   +RY   +E G   + + S++  ++     
Sbjct: 311 NGMGGRSESLILMYEELHIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGA 370

Query: 316 QAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTLIAQKTT 374
             P   R+  LPSG LI     G S +  V+HM++E  S   VL R L  S         
Sbjct: 371 PPP---RSRRLPSGCLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRW 427

Query: 375 MAAL-----RHLRQISQEVSQ--PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           +AAL     R+   ++  V      VT  G+R  ++  LSQR+   F  +L       W+
Sbjct: 428 LAALQRACERYASLVALGVPHHIAGVTPEGKR--SMMKLSQRMVNSFCSSLGASQMHQWT 485

Query: 428 MLE-SDGID-DVTVHVNSSPSKMMGVQLS 454
            L  S+ +   VT+H ++ P +  GV LS
Sbjct: 486 TLSGSNEVSVRVTMHRSTDPGQPNGVVLS 514


>gi|345195198|tpg|DAA34964.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 687

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 140/563 (24%), Positives = 219/563 (38%), Gaps = 136/563 (24%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP Q++ LE ++ ECP P   +R  L RE      +EP+QIK WFQNRR + K  
Sbjct: 18  RYHRHTPRQIQQLEAMFKECPHPDENQRAALSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 84  -QRKEASRLQAVN----------------------------------RKLTAMNKLLMEE 108
            +R +   L+A N                                  +KL   N  L EE
Sbjct: 74  HERADNCFLRAENDKIRCENITMREALKNVICPSCGGPPVDEDFFDEQKLRMENARLKEE 133

Query: 109 NDRLQKQVSQLVYENTFFRQQ----TQNAATL------------ATTDTSCESVVTSGQH 152
            DR+    S+  Y    F Q     T + ++L             + D    S  +SG  
Sbjct: 134 LDRVSSITSK--YLGRPFTQMPPVPTMSVSSLDLSVGGMGSLGGPSLDLDLLSGCSSGLP 191

Query: 153 HLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ-MPG------------ 199
           +  P      P  +     ++ +A   + E +  A      WV+ +PG            
Sbjct: 192 YQVPA-----PVTEMERPMMVDMAARAMDELIRLAQAGEQIWVKGVPGDAREVLDVGTYD 246

Query: 200 ---MKPG----PDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR----DC 248
               KPG    P  I + A         +R  GLV +    + ++  D   W        
Sbjct: 247 SLFAKPGAAFRPPDINVEA---------SRDSGLVFMSAVALVDVFMDTNKWMEFFPGIV 297

Query: 249 RSVEVVNVLPTGSSGTIE---LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSL 305
              + V+VL  G  G  E   ++Y +L+  T + P R+   LRY   +E G   V + SL
Sbjct: 298 SKAQTVDVLVNGLGGRSESLIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAVADVSL 357

Query: 306 NNTQNGPSMPQAPHF---VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RP 361
              ++        H+    R+  +PSG LI     G S +  V+HM++E      VL R 
Sbjct: 358 EGQRDA-------HYGVPSRSRRMPSGCLIADMSNGYSKVTWVEHMEIEQMLPINVLYRN 410

Query: 362 LYESSTLIAQKTTMAALRHLRQISQEVSQ--------PSVTGWGRRPAALRALSQRLSRG 413
           L  S         +AAL+   +    V+           VT  G+R  ++  LSQR+   
Sbjct: 411 LVLSGAAFGAHRWLAALQRACERFASVATLGVPHHDVAGVTPEGKR--SMTKLSQRMVSS 468

Query: 414 FNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASM 473
           F  +L+    + W++L   G  DV+V V++  S   G             N V+ + A+ 
Sbjct: 469 FCASLSSSPLQRWTLLS--GTTDVSVRVSTHRSTDSG-----------QPNGVVLSAATS 515

Query: 474 LLQDVPPAILLRFLREH--RSEW 494
           +   VP   +  F+R+   RS+W
Sbjct: 516 IWLPVPGDHVFAFVRDENARSQW 538


>gi|326490099|dbj|BAJ94123.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 160/701 (22%), Positives = 276/701 (39%), Gaps = 179/701 (25%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP+Q++ LE L+ ECP P   +R +L +      +++ +Q+K WFQNRR + K  
Sbjct: 97  RYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL----SLDARQVKFWFQNRRTQMKTQ 152

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 114
            +R E + L+  N KL   N  + E                            EN RL+ 
Sbjct: 153 LERHENALLKQENEKLRTENLTIREAMRTPMCGGCGSPAMLGEVSLEEQHLRIENARLKD 212

Query: 115 QVSQLVYENTFFRQ---------QTQNAATLATTDTSCESVVTSGQHHLTPQQQHQH--- 162
           +++++    T F           Q Q   ++   ++S E  V  G   +   Q   H   
Sbjct: 213 ELNRVCTLATKFLGKPVSLLSPLQLQPHLSMPLPNSSLELAV-GGIGGIGSMQSSMHGMM 271

Query: 163 ---------------PPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM---------- 197
                           P  A+ + L S+ +   + FL  A     E V+M          
Sbjct: 272 SEYAGGASSSMGTVITPARATGSALASMVDIDRSVFLELAISAMDELVKMAQTDDPFWVT 331

Query: 198 --PGMKPGPDSIGIVAISHG---CTGV--------AARACGLVGLDPT-RVAEILKDRPS 243
             PG  P  +S+      H    C G+        A+R  GLV +D +  + E L D   
Sbjct: 332 GLPGF-PDKESLNFEEYLHSSQHCIGMKPAGFVSEASRESGLVIIDNSLALVETLMDERR 390

Query: 244 WYRDCRSV---------EVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLE 294
           W  D  S          EV N +    +G + L+  +L   + L P R+   LR+   L 
Sbjct: 391 W-SDMFSCMIAKATILEEVSNGIGGTRNGALLLMKAELQVLSPLVPIREVIFLRFCKQLA 449

Query: 295 DGSLVVCERSLN---NTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLE 351
           +G+  V + S++   + QN  +     + ++   LPSG +++    G   +  V+H + +
Sbjct: 450 EGAWAVVDVSIDGLLSNQNSATTSAGAN-LKCRRLPSGCVMQDTPNGYCKVTWVEHTEYD 508

Query: 352 PWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-------ISQEVSQP----SVTGWGRRP 400
             SV +  RPL  S         +A L+  RQ       +S   + P    +++  GRR 
Sbjct: 509 EASVHQFYRPLLRSGLAFGASRWLATLQ--RQCECLAILMSSATASPNEQTAISQEGRR- 565

Query: 401 AALRALSQRLSRGFNEALNGFTDEGWSMLESDGI-----DDVTVHVNSSPSKMMGVQLSY 455
            ++  L++R++  F   ++  +   WS L  DG      +DV V    S S+        
Sbjct: 566 -SMLKLARRMTENFCAGVSASSAREWSKL--DGATGSIGEDVRVMARKSVSE-------- 614

Query: 456 VNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCS 513
               P     V+ + A+ +   + P  L  FLR+   R+EW     D  S      GP  
Sbjct: 615 ----PGEPPGVVLSAATSVWVPIAPEKLFDFLRDEQLRAEW-----DILS----NGGPM- 660

Query: 514 LPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDEN 573
                      Q +  +A   ++   + +++   M+  +  M++     L + C+    +
Sbjct: 661 -----------QEMARIAKGHQNGNSVSLLRASAMSANQSSMLI-----LQETCT----D 700

Query: 574 AVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIP 605
           A G+   +V+AP+D            S    ++PSGF I+P
Sbjct: 701 ASGSI--VVYAPVDIPAMQLVMNGGDSTYVALLPSGFAILP 739


>gi|357136990|ref|XP_003570085.1| PREDICTED: homeobox-leucine zipper protein ROC5-like [Brachypodium
           distachyon]
          Length = 791

 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 160/697 (22%), Positives = 274/697 (39%), Gaps = 172/697 (24%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP+Q++ LE L+ ECP P   +R +L R      +++ +Q+K WFQNRR + K  
Sbjct: 90  RYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL----SLDARQVKFWFQNRRTQMKTQ 145

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 114
            +R E + L+  N KL A N  + E                            EN RL+ 
Sbjct: 146 LERHENALLKQENDKLRAENMTIREAMRSPMCGGCGSPAMLGEVSLEEQHLRIENARLKD 205

Query: 115 QVSQLVYENTFFRQ---------QTQNAATLATTDTSCESVVTSGQHHLTPQQQHQH--- 162
           +++++    T F           Q Q   ++   ++S E  V  G   +   Q   H   
Sbjct: 206 ELNRVCALATKFLGKPVSLMSPLQLQPHLSMHLPNSSLELAV-GGMGGIGSMQPTLHGTM 264

Query: 163 ---------------PPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM---------- 197
                           P  A+ + + SI +   + FL  A     E ++M          
Sbjct: 265 SEFAGGASSSMGTVITPARATGSAIASITDIDRSMFLELAISAMDELIKMAQVDDPLWVT 324

Query: 198 --PGMKPGPDSI----------GIVAISHGCTGVAARACGLVGLDPT-RVAEILKDRPSW 244
             PG  P  +++          GI     G    A+R  GLV +D +  + E L D   W
Sbjct: 325 GLPG-SPNKETLNFEEYHSFLPGIGMKPAGFVSEASRESGLVIIDNSVALVETLMDERRW 383

Query: 245 -------YRDCRSVEVVNVLPTGS-SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDG 296
                        +E V+    GS +G++ L+  +L   + L P R+   LR+   L +G
Sbjct: 384 SDMFSCMIAKATILEEVSTGIAGSRNGSLLLMKAELQVLSPLVPIREVIFLRFCKQLAEG 443

Query: 297 SLVVCERSLNN---TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPW 353
           +  V + S++     QN  +   A +  +   LPSG +++    G   +  V+H + +  
Sbjct: 444 AWAVVDVSIDGLMRDQNSATTSTAANL-KCRRLPSGCVMQDTPSGFCKVTWVEHTEYDEA 502

Query: 354 SVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQPSVTG--------WGRRPAALR 404
           SV +  RPL  S         +A L R    ++  +S P+V           G+R  ++ 
Sbjct: 503 SVHQFYRPLLRSGLAFGASRWLATLQRQCECLAILMSPPTVAASEPMAISLEGKR--SML 560

Query: 405 ALSQRLSRGFNEALNGFTDEGWSMLESDGI-----DDVTVHVNSSPSKMMGVQLSYVNGF 459
            L++R++  F   ++  +   WS L  DG      +DV V    S S+            
Sbjct: 561 KLARRMTDNFCAGVSASSAREWSKL--DGATGSIGEDVRVMARKSVSE------------ 606

Query: 460 PSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVP 517
           P     V+ + A+ +   V P  L  FLR+   R+EW     D  S      GP      
Sbjct: 607 PGEPPGVVLSAATSVWVPVAPEKLFDFLRDEQLRAEW-----DILS----NGGPM----- 652

Query: 518 RAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGN 577
                  Q +  +A   ++   + +++   M+  +  M++     L + C+    +A G+
Sbjct: 653 -------QEMTRIAKGHQNGNSVSLLRASAMSANQSSMLI-----LQETCT----DASGS 696

Query: 578 CAELVFAPID---------ASFSDDAPIIPSGFRIIP 605
              +V+AP+D            S    ++PSGF I+P
Sbjct: 697 I--VVYAPVDIPAMQLVMEGRDSTCVALLPSGFAILP 731


>gi|326525158|dbj|BAK07849.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 685

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 139/553 (25%), Positives = 218/553 (39%), Gaps = 113/553 (20%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 84
           +Y R+TP Q++ LE ++ ECP P   +R  L RE      +EP+QIK WFQNRR + K  
Sbjct: 19  RYHRHTPRQIQQLEAMFKECPHPDENQRMHLSREL----GLEPRQIKFWFQNRRTQMKAQ 74

Query: 85  ---------RKEASRLQAVN----------------------------RKLTAMNKLLME 107
                    R E  +++  N                             KL   N  L E
Sbjct: 75  HERADNCFLRAENDKIRCENIAMREALKNVICPTCGGPHSGADDYFDEHKLRMENAHLKE 134

Query: 108 ENDRLQKQVSQLVYE--NTFFRQQTQNAATLATTDTSCESVVTSGQ----HHLTPQQQHQ 161
           E DR+    S+ +          Q  + ++L  +     S V  G       L      Q
Sbjct: 135 ELDRVSSLTSKYLGRPITQLPSMQPLSMSSLELSVGGLGSPVALGPALDLDTLGGSSPFQ 194

Query: 162 HPP--RDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG--------------MKPGPD 205
            P    D     +  +A   + E +  A      WV+  G               KPG  
Sbjct: 195 LPAPVSDMERPMMAEMATRAMDELIRLAQAGEHLWVKTAGGREVLNVDTYDSIFAKPGSS 254

Query: 206 S-----IGIVAISHGCTGVAARACGLVG--LDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
           S     + +      C  V   A GLV   +D ++  E     P+     R+++V+    
Sbjct: 255 SFRGPDVHVEGSRDSCL-VLTTAIGLVDTFMDSSKWTEFF---PTVVTRARTIDVLVNGM 310

Query: 259 TGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGP-SMPQA 317
            G S ++ L+Y +L+  + + P R+F  LRY   +E G   + + S++  ++     P A
Sbjct: 311 AGRSESLVLMYEELHVMSPVVPTREFCFLRYCRQIEQGLWAIADVSVDLQRDARYGAPPA 370

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTLIAQKTTMA 376
               R+  LPSG LI     G S +  V+HM+ E  + + ++ R L  S         +A
Sbjct: 371 ----RSRRLPSGCLIADMSNGYSKVTWVEHMETEDKTPINQLYRDLVLSGAAFGAHRWLA 426

Query: 377 AL-RHLRQISQEVSQP-----SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
           AL R   + +  V+ P      VT  G+R  ++  LSQR+   F  +L+      W+ L 
Sbjct: 427 ALQRACERHACLVTPPHRDIAGVTLEGKR--SMMRLSQRMVGSFCASLSASQQHRWTTLS 484

Query: 431 --SDGIDD-----VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAIL 483
               G+D+     V VH ++ P +  GV              VL A  S+ L  VP   +
Sbjct: 485 GPGAGVDEAAGVRVMVHRSTDPGQPSGV--------------VLSAATSIWLP-VPCDRV 529

Query: 484 LRFLREH--RSEW 494
             F+R+   RS+W
Sbjct: 530 FAFVRDENTRSQW 542


>gi|357454911|ref|XP_003597736.1| Homeobox-leucine zipper protein GLABRA [Medicago truncatula]
 gi|355486784|gb|AES67987.1| Homeobox-leucine zipper protein GLABRA [Medicago truncatula]
          Length = 794

 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 139/642 (21%), Positives = 258/642 (40%), Gaps = 124/642 (19%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 143 YHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 198

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDR----------------LQKQVSQLVYENTFFR 127
           +R E S L++   KL   NK L E  ++                +  +  QL  EN   +
Sbjct: 199 ERHENSLLKSEIEKLREKNKTLRETINKACCPNCGVPTTNRDGTMATEEQQLRIENAKLK 258

Query: 128 QQTQNA-ATLATTDTSCESVVTSGQHHLTPQQQHQHPPRD-------ASPAGLLSIAEET 179
            + +   A L    +   S   S  H     Q++     D          + ++ +  + 
Sbjct: 259 AEVERLRAALGKYASGTMSPSCSTSH----DQENIKSSLDFYTGIFCLDESRIMDVVNQA 314

Query: 180 LTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAI---------SHG---CTGVAARACGLV 227
           + E +  AT     W++   ++ G + +               HG    +  A+R  G+V
Sbjct: 315 MEELIKMATMGEPMWLR--SLETGREILNYDEYMKEFADENSDHGRPKRSIEASRDTGVV 372

Query: 228 GLDPTRVAEILKDRPSWYR--DC--RSVEVVNVLPTG----SSGTIELLYMQLYAPTTLA 279
             D  R+ +   D   W     C       V+ +  G     +G ++L++ +L   T + 
Sbjct: 373 FADLPRIVQCFLDANQWKEMFPCLISKAATVDTICKGEGSNKNGAVQLMFAELQMLTPMV 432

Query: 280 PARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGG 339
           P R+ + +RY   L      + + S++  ++          V+    PSG +I     G 
Sbjct: 433 PTREVYFVRYCKRLSGEKWAIVDVSIDKVEDNID----KSLVKCRKRPSGCIIEDKSNGH 488

Query: 340 SIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLRQISQEVSQPSVT 394
             +  V+H++ +   V  + R +  S      +  +A L     R +  ++  V     T
Sbjct: 489 CKVVWVEHLECQKSIVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDST 548

Query: 395 GW----GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSK 447
           G     GR+  ++  L+QR++  F +A++  +   W+ + S   +D+ +    +   PS+
Sbjct: 549 GVATLAGRK--SILKLAQRMTWSFCQAISASSFHTWTKVTSKTGEDIRISSRKNLNDPSE 606

Query: 448 MMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAA 505
            +G+              ++CA +S+ L  + P +L  FLR+   R+EW     D  S  
Sbjct: 607 PLGL--------------IVCAVSSIWL-PISPNVLFDFLRDETRRTEW-----DIMSNG 646

Query: 506 AVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM--PSDIFL 563
                  +L   +  + G  V +    TI+ +E    I  ++  +  E M++  P+DI  
Sbjct: 647 GTVQSIANL--AKGQDRGNAVTI---QTIKSKENNMWILQDSCTNSYESMVVYAPADITG 701

Query: 564 LQ-LCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRII 604
           +Q + +G D                   S +  I+PSGF I+
Sbjct: 702 IQSVMTGCD-------------------SSNLAILPSGFSIV 724


>gi|345195202|tpg|DAA34966.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 699

 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 138/565 (24%), Positives = 223/565 (39%), Gaps = 138/565 (24%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP Q++ LE ++ ECP P   +R  L RE      +EP+QIK WFQNRR + K  
Sbjct: 18  RYHRHTPRQIQQLEAMFKECPHPDENQRAALSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME---------------------------ENDRLQKQ 115
            +R +   L+A N K+   N  + E                           EN RL+++
Sbjct: 74  HERADNCFLRAENDKIRCENITMREALKNVICPSCGGPPVAEDFFDEQKLRMENARLKEE 133

Query: 116 VSQLV-----YENTFFRQQ----TQNAATL--------------ATTDTSCESVVTSG-- 150
           + ++      Y    F Q     T + ++L               + D    S  +SG  
Sbjct: 134 LDRVSSITSKYLGRPFTQMPPVPTMSVSSLDLSVGGMPGQGLGGPSLDLDLLSGCSSGLP 193

Query: 151 QHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ-MPG---------- 199
            H   P  + + P        ++ +A   + E +  A      WVQ MPG          
Sbjct: 194 YHMPAPVTEMERP-------MMVDMATRAMDELIRLAQAGEQIWVQGMPGDAREVLDVAT 246

Query: 200 -----MKPG----PDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR---- 246
                 KPG    P  I +           +R  GLV +    + ++  D   W      
Sbjct: 247 YDSLFAKPGGAFRPPEINVEG---------SRDSGLVFMSAVALVDVFMDTNKWMEFFPG 297

Query: 247 DCRSVEVVNVLPTGSSGTIE---LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCER 303
                + V+VL  G  G  E   ++Y +L+  T + P R+   LRY   +E G   V + 
Sbjct: 298 IVSKAQTVDVLVNGLCGRSESLIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAVADV 357

Query: 304 SLNNTQNGPSMPQAPHF---VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL- 359
           SL+  ++        H+    R+  +PSG LI     G S +  V+H+++E      VL 
Sbjct: 358 SLDGQRDA-------HYGVPSRSRRMPSGCLIADMSNGYSKVTWVEHLEIEHMLPINVLY 410

Query: 360 RPLYESSTLIAQKTTMAALRHLRQISQEVSQ--------PSVTGWGRRPAALRALSQRLS 411
           R L  S         +AAL+   +    ++           VT  G+R  ++  LSQR+ 
Sbjct: 411 RNLVLSGAAFGAHRWLAALQRACERFASLATLGVPHHDVAGVTPEGKR--SMMRLSQRMV 468

Query: 412 RGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKA 471
             F  +L+    + W++L   G  DV+V V++  S   G             N V+ + A
Sbjct: 469 SSFCASLSSSPLQRWTLLS--GTTDVSVCVSTHRSTDSG-----------QPNGVVLSAA 515

Query: 472 SMLLQDVPPAILLRFLREH--RSEW 494
           + +   VP   +  F+R+   RS+W
Sbjct: 516 TSIWLPVPGDHVFAFVRDENARSQW 540


>gi|60099373|dbj|BAD89977.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 633

 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 117/524 (22%), Positives = 216/524 (41%), Gaps = 89/524 (16%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           KY R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K  
Sbjct: 102 KYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAI 157

Query: 84  -QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV-------SQLVYENTFFRQQTQN-AA 134
            +R E S L+A   KL   NK + E   +              L  EN+  + +     A
Sbjct: 158 QERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGPDDLHLENSKLKAELDKLRA 217

Query: 135 TLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKAT------ 188
            L  T    ++  +  Q H                 G+ ++ +  + E  ++AT      
Sbjct: 218 ALGRTPYPLQASCSDDQEHRLGSLDFY--------TGVFALEKSRIAEISNRATLELQKM 269

Query: 189 GTAVEWVQMPGMKPGPDSIGI------------VAISHGCTGVAARACGLVGLDPTRVAE 236
            T+ E + +  ++ G + +               +     T  A+R  G+V +D  ++A+
Sbjct: 270 ATSGEPMWLRSVETGREILNYDEYLKEFPQAQASSFPGRKTIEASRDAGIVFMDAHKLAQ 329

Query: 237 ILKDRPSWYRD----CRSVEVVNVL-----PTGSSGTIELLYMQLYAPTTLAPARDFWLL 287
              D   W             V+V+     P+   G I+L++ ++   T + P R+ + +
Sbjct: 330 SFMDVGQWKETFACLISKAATVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFV 389

Query: 288 RYTSVLEDGSLVVCERSL----NNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIH 343
           R    L      + + S+    +NT+   S+      ++   LPSG +I     G S + 
Sbjct: 390 RSCRQLSPEKWAIVDVSVSVEDSNTEKEASL------LKCRKLPSGCIIEDTSNGHSKVT 443

Query: 344 IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR-HLRQIS--QEVSQPS-----VTG 395
            V+H+D+   +V  + R L  +      +  +A L+ H  ++      + P+     VT 
Sbjct: 444 WVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSLGVTT 503

Query: 396 WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGVQ 452
              R + L+ ++QR+++ F  A+   +   W+ + +    D+ V    +   P +  GV 
Sbjct: 504 LAGRKSVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQDMRVSSRKNLHDPGEPTGV- 561

Query: 453 LSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
                        ++CA +S+ L  V PA+L  F R+   R EW
Sbjct: 562 -------------IVCASSSLWL-PVSPALLFDFFRDEARRHEW 591


>gi|224073973|ref|XP_002304207.1| predicted protein [Populus trichocarpa]
 gi|222841639|gb|EEE79186.1| predicted protein [Populus trichocarpa]
          Length = 759

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 158/732 (21%), Positives = 288/732 (39%), Gaps = 162/732 (22%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 109 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 164

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDR----------------LQKQVSQLVYENTFFR 127
           +R E S L+    KL   NK + E  ++                L  +  QL  EN   +
Sbjct: 165 ERHENSLLKTEMDKLREENKTMRETINKACCPNCGTATTSRGTALTTEEQQLRIENAKLK 224

Query: 128 QQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKA 187
            + +    +    +   +   S ++      Q      D    G+  + +  +TE  ++A
Sbjct: 225 AEVEKLRVVIGKYSPGATASCSAEN-----DQENRSSLDFY-TGIFGLDKTRITEIANQA 278

Query: 188 ------TGTAVEWVQMPGMKPGPDSIGIVAISH--GCTGVA-----------ARACGLVG 228
                   TA E + +  ++ G + +     +   G    +           +R   +V 
Sbjct: 279 MEELKKMATAGEPLWIRSVETGREILNYDEYTKEFGSENSSNNGRPKRSIEASRETRVVF 338

Query: 229 LDPTRVAEILKDRPSWYR--DC--RSVEVVNVLPTGS----SGTIELLYMQLYAPTTLAP 280
           +D  R+ +   D   W     C       V+V+  G     +G ++L++ ++   T + P
Sbjct: 339 VDLPRLVQSFMDVNRWKEMFPCLISKAATVDVICNGEGANRNGAVQLMFAEVQMLTPMVP 398

Query: 281 ARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGS 340
            R+ + +RY   L      + + S++  ++          V+    PSG +I     G  
Sbjct: 399 TREVYFVRYCKQLNAEQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIEDKSNGHC 454

Query: 341 IIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLRQISQEVSQPSVTG 395
            +  V+H++ +  +V  + R +  S      +  +A L     R +  ++  V     TG
Sbjct: 455 KVIWVEHLECQKSAVHTMFRTVVHSGLAFGARHWIATLQLQCERLVFFMATNVPTKDSTG 514

Query: 396 ----WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKM 448
                GR+  ++  L+QR++  F  A+   +   WS + S   +D+ +    +   P + 
Sbjct: 515 VATLAGRK--SILKLAQRMTWSFCRAIGASSYHTWSKVSSKTGEDIRISSRKNLNEPGEP 572

Query: 449 MGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAA 506
           +G+              +LCA +S+ L  VPP IL  FLR+   R+EW     D  S   
Sbjct: 573 VGL--------------ILCAVSSVWL-PVPPHILFDFLRDEARRNEW-----DIMS--- 609

Query: 507 VKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQL 566
              GP               +  +A+ I+ ++      +  M     +M +  D      
Sbjct: 610 -NGGP---------------VQTIANLIKGQDRGNAAAILKMKSKENNMWVLQDS----- 648

Query: 567 CSGVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRIIPLDSGKDTPSPNR 617
           C+   E+ V      ++AP+D +          S +  I+PSGF I+P   G ++    R
Sbjct: 649 CTNAYESMV------IYAPVDTNGMQSVINGCDSSNLAILPSGFSILP--DGHES----R 696

Query: 618 TLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF--------AFEMHLQENVASMA 669
            L + S  E          + ST+ G   S++TIAFQ            M   E+V ++ 
Sbjct: 697 PLVITSRQE----------EKSTEGG---SLLTIAFQILTNTSPTAKLTMESVESVNALI 743

Query: 670 RQYVRGIIASVQ 681
              ++ I  S+Q
Sbjct: 744 SCTLKNIKTSLQ 755


>gi|115440407|ref|NP_001044483.1| Os01g0788800 [Oryza sativa Japonica Group]
 gi|75252913|sp|Q5ZAY0.1|TF1_ORYSJ RecName: Full=Homeobox-leucine zipper protein TF1; AltName:
           Full=HD-ZIP protein TF1; AltName: Full=Homeodomain
           transcription factor TF1; AltName: Full=Protein
           TRANSCRIPTION FACTOR 1; Short=OsTF1
 gi|53792430|dbj|BAD53268.1| transcription factor 1 [Oryza sativa Japonica Group]
 gi|56784272|dbj|BAD81954.1| transcription factor 1 [Oryza sativa Japonica Group]
 gi|113534014|dbj|BAF06397.1| Os01g0788800 [Oryza sativa Japonica Group]
          Length = 709

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 202/512 (39%), Gaps = 89/512 (17%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--K 86
           R T +Q E LE  +  C  P   +++ L       + +   Q+K WFQN+R + K    K
Sbjct: 72  RLTGKQSEVLEGFFSICGHPDDGQKRHLSET----TGLGLDQVKFWFQNKRTQVKTMCWK 127

Query: 87  EASRLQAVNRKLTAMNKLLMEENDR---------------------LQKQVSQLVYENTF 125
           E       N KL+  N++L +EN R                     L  ++ +L+ ++ +
Sbjct: 128 EE------NYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEW 181

Query: 126 FRQQ------TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEET 179
            +Q+      T  AA LA    S    V SGQH    QQ      ++A  A  L I  E+
Sbjct: 182 LQQEIARSNGTPPAANLAFQLNSSADYVFSGQHD---QQMIAELAKNAMHA--LIILAES 236

Query: 180 LTEFLSKATGTAVEWVQMPGMK---PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAE 236
                    G + E +         PG +S   +    G    A RA  +V +D   V +
Sbjct: 237 HVALWFPVPGCSYEVLNKMAYDQAYPGDNSANAI----GFKTEATRAVSMVMMDYKSVVD 292

Query: 237 ILKDRPSWYR----DCRSVEVVNVLPT-----GSSGTIELLYMQLYAPTTLAPARDFWLL 287
            L D P  YR    +  S  V N + T     G +G I+L+ +++  P+ L PAR    L
Sbjct: 293 FLMD-PYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFL 351

Query: 288 RYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDH 347
           RY +VL +G +VV + SL++            F +   +PSG+LI+        +  ++H
Sbjct: 352 RYCNVLNEGLVVVIDVSLDD---------GSIFSKCRKMPSGFLIQSIRPNSCKVTAIEH 402

Query: 348 MDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH---LRQISQEVSQPSVTGWGRRPAALR 404
           +  +   V E+ +P        A++      R    +R +    + P V+  GR+   L 
Sbjct: 403 VLADDTGVHELYQPCMNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGRK--NLM 460

Query: 405 ALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSN 464
            L+  L   F   +       W           TV + +   K + V         S  N
Sbjct: 461 KLADDLLASFAGGIAATGGGTW-----------TVVIGAGTEKDIRVAYRRTTEGSSSYN 509

Query: 465 AVLCAKASMLLQDVPPAILLRFLRE--HRSEW 494
           A+L   AS+ L  +P       LR   HR +W
Sbjct: 510 AILSVTASLRLP-LPMRKTFDLLRNLTHRCKW 540


>gi|22023157|gb|AAM88945.1|AF317882_1 transcription factor 1 [Oryza sativa]
          Length = 709

 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 202/512 (39%), Gaps = 89/512 (17%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--K 86
           R T +Q E LE  +  C  P   +++ L       + +   Q+K WFQN+R + K    K
Sbjct: 72  RLTGKQSEVLEGFFSICGHPDDGQKRHLSET----TGLGLDQVKFWFQNKRTQVKTMCWK 127

Query: 87  EASRLQAVNRKLTAMNKLLMEENDR---------------------LQKQVSQLVYENTF 125
           E       N KL+  N++L +EN R                     L  ++ +L+ ++ +
Sbjct: 128 EE------NYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEW 181

Query: 126 FRQQ------TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEET 179
            +Q+      T  AA LA    S    V SGQH    QQ      ++A  A  L I  E+
Sbjct: 182 LQQEIARSNGTPPAANLAFQLNSSADYVFSGQHD---QQMIAELAKNAMHA--LIILAES 236

Query: 180 LTEFLSKATGTAVEWVQMPGMK---PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAE 236
                    G + E +         PG +S   +    G    A RA  +V +D   V +
Sbjct: 237 HVALWFPVPGCSYEVLNKMAYDQAYPGDNSANAI----GFKTEATRAVSMVMMDYKSVVD 292

Query: 237 ILKDRPSWYR----DCRSVEVVNVLPT-----GSSGTIELLYMQLYAPTTLAPARDFWLL 287
            L D P  YR    +  S  V N + T     G +G I+L+ +++  P+ L PAR    L
Sbjct: 293 FLMD-PYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFL 351

Query: 288 RYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDH 347
           RY +VL +G +VV + SL++            F +   +PSG+LI+        +  ++H
Sbjct: 352 RYCNVLNEGLVVVIDVSLDD---------GSIFSKCRKMPSGFLIQSIRPNSCKVTAIEH 402

Query: 348 MDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH---LRQISQEVSQPSVTGWGRRPAALR 404
           +  +   V E+ +P        A++      R    +R +    + P V+  GR+   L 
Sbjct: 403 VLADDTGVHELYQPRVNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGRK--NLM 460

Query: 405 ALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSN 464
            L+  L   F   +       W           TV + +   K + V         S  N
Sbjct: 461 KLADDLLASFAGGIAATGGGTW-----------TVVIGAGTEKDIRVAYRRTTEGSSSYN 509

Query: 465 AVLCAKASMLLQDVPPAILLRFLRE--HRSEW 494
           A+L   AS+ L  +P       LR   HR +W
Sbjct: 510 AILSVTASLRLP-LPMRKTFDLLRNLTHRCKW 540


>gi|30678721|ref|NP_567183.2| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
 gi|122223902|sp|Q0WV12.1|ANL2_ARATH RecName: Full=Homeobox-leucine zipper protein ANTHOCYANINLESS 2;
           AltName: Full=HD-ZIP protein ANL2; AltName:
           Full=Homeodomain protein AHDP; AltName: Full=Homeodomain
           transcription factor ANL2
 gi|110742219|dbj|BAE99036.1| homeodomain protein AHDP [Arabidopsis thaliana]
 gi|332656526|gb|AEE81926.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
          Length = 802

 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 222/564 (39%), Gaps = 110/564 (19%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQL-IRECPILS 64
           SG  +D+ D   +K      +Y R+TP+Q++ LE ++ ECP P   +R +L  R C    
Sbjct: 122 SGEDQDAADKPPRKK-----RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC---- 172

Query: 65  NIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME-------------- 107
            +E +Q+K WFQNRR + K   +R E + L+  N KL A N  + E              
Sbjct: 173 -LETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRNPICTNCGGPA 231

Query: 108 --------------ENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVV---TSG 150
                         EN RL+ ++ ++      F             ++S E  V    +G
Sbjct: 232 MLGDVSLEEHHLRIENARLKDELDRVCNLTGKFL----GHHHNHHYNSSLELAVGTNNNG 287

Query: 151 QHH------------LTPQQQHQHPPRDASPAG-LLSIAEETLTEFLSKATGTAVEWVQ- 196
            H             L PQQQ             LL +A   + E +  A      WV+ 
Sbjct: 288 GHFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVLLELALTAMDELVKLAQSEEPLWVKS 347

Query: 197 MPGMKP--GPDSIGIVAISHGCTGV---AARACGLVGLDPTRVAEILKDRPSWYR----D 247
           + G +     D       S   TG+   A+R  G+V ++   + E L D   W      +
Sbjct: 348 LDGERDELNQDEYMRTFSSTKPTGLATEASRTSGMVIINSLALVETLMDSNRWTEMFPCN 407

Query: 248 CRSVEVVNVLPTGSSGTI----ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCER 303
                  +V+  G +GTI    +L+  +L   + L P R+   LR+     +G   V + 
Sbjct: 408 VARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDV 467

Query: 304 SLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 363
           S++  +       AP   R   LPSG +++    G S +  V+H + +   + ++ RPL 
Sbjct: 468 SIDPVRENSG--GAPVIRR---LPSGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLL 522

Query: 364 ESSTLIAQKTTMAALRHLRQ-------ISQEVS---QPSVTGWGRRPAALRALSQRLSRG 413
            S      +  +A L+  RQ       IS  V+     S+T  GR+  ++  L+QR++  
Sbjct: 523 RSGLGFGSQRWLATLQ--RQCECLAILISSSVTSHDNTSITPGGRK--SMLKLAQRMTFN 578

Query: 414 FNEALNGFTDEGWSMLESDGID-DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKAS 472
           F   ++  +   WS L    +D DV V    S               P     ++ + A+
Sbjct: 579 FCSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDD------------PGEPPGIVLSAAT 626

Query: 473 MLLQDVPPAILLRFLREH--RSEW 494
            +     P  L  FLR    R EW
Sbjct: 627 SVWLPAAPQRLYDFLRNERMRCEW 650


>gi|33355392|gb|AAQ16126.1| homeodomain protein BNLGHi6313 [Gossypium hirsutum]
          Length = 788

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 175/805 (21%), Positives = 294/805 (36%), Gaps = 194/805 (24%)

Query: 1   MMAVSSG-GSRDSRDS--GGQKMIMDNG-------KYVRYTPEQVEALERLYHECPKPSS 50
           MM    G GS D  +   G  +   DNG       K+ R+ P Q+  LE  + ECP P  
Sbjct: 65  MMKEDDGYGSSDDFEGALGNDQDTADNGRPPKKKKKFHRHNPHQIHELESFFKECPHPDE 124

Query: 51  MRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
            +R++L R       +E KQIK WFQNRR + K   +R E   L+  N KL A N LL +
Sbjct: 125 KQRRELSRRLA----LESKQIKFWFQNRRTQMKTQLERHENVFLKQENDKLRAENDLLRQ 180

Query: 108 E--------------NDRLQKQVSQLVYENTFFRQQTQNAATLATT-------------- 139
                           D +  + SQL+ EN+  + +   A  L                 
Sbjct: 181 AIASAICNNCGVPAVPDEISYEPSQLMIENSRLKDELNRARALTNKFLGRHLSSSSANPS 240

Query: 140 -------DTSCESVV--------TSGQHHLTPQQQHQHP--------------PRDASPA 170
                  +++ E VV         +G   L    +  H               P D S  
Sbjct: 241 PSPSQGLNSNVEVVVRRTGFCGLNNGSISLPMGFEFGHGATMPLMNPSFAYEMPYDKS-- 298

Query: 171 GLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISH-----------GCTGV 219
            L+ +A   + E +  A      W++  G   G +++ +                G T  
Sbjct: 299 ALVDVALAAMDELIKMAQMGNPLWIK--GFGDGMETLNLEEYKRTFSSFIGMKPSGFTTE 356

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-----DCRSVEVVNVLPTGSSGT----IELLYM 270
           A R   +V L    + + L D   W         R+V  ++VL +G   T    ++L+  
Sbjct: 357 ATRETAMVPLRGLALVDTLMDANRWAEMFPCMISRAV-TIDVLSSGKGVTRDNALQLMEA 415

Query: 271 QLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGY 330
           +    + L P R    +R+     D    + + S+N +    +   A  F     LPSG 
Sbjct: 416 EFQVLSPLVPIRQVQFIRFCKQHSDSVWAIVDVSINLS----NAANALMFANCRRLPSGC 471

Query: 331 LIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQ 390
           +I+  +   S +  V+H + +  +V  + RPL  S      +  +A LR       ++  
Sbjct: 472 VIQDMDNKYSKVTWVEHSEYDESTVHHLFRPLLSSGFGFGAQRWIATLRRQYSSLAQLMS 531

Query: 391 PSVTG-----WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI-DDVTVHVNSS 444
           P + G      G++  ++  L+QR++  F+  +   +   W  L    + +DV V    +
Sbjct: 532 PDIHGEDINTVGKK--SMLKLAQRMAYNFSAGIGASSVNKWDKLNVGNVGEDVRVMTRKN 589

Query: 445 ---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSI 499
              P + +G+ LS                A+ +   +    L  FLR    R++W     
Sbjct: 590 VNDPGEPLGIVLS---------------AATSVWMPITQQTLFGFLRNERMRNQW----- 629

Query: 500 DAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           D  S+   +       V +    G  V +     +   +        NM   RE      
Sbjct: 630 DILSSG--RPMQAMFSVAKGPGQGNCVSILRGAAVNGSD-------TNMLILRETW---- 676

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRIIPLDSGK 610
                        +A G  A +V+AP+DAS          S    ++PSGF I+P   G 
Sbjct: 677 ------------SDACG--ALIVYAPVDASSIRVVMNGGDSSHVALLPSGFAILP---GV 719

Query: 611 DTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMAR 670
            T  P+   D+               D +T  G    ++T+ FQ          +   + 
Sbjct: 720 QTDGPSMQPDI---------------DENTSDG---CILTVGFQILVNSVPTAKLTVESV 761

Query: 671 QYVRGIIA-SVQRVALALSPSRFGS 694
           + V  ++  +V+++  ALS ++ GS
Sbjct: 762 ETVNHLLTCTVEKIKAALSVTQLGS 786


>gi|356556218|ref|XP_003546423.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 747

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 136/645 (21%), Positives = 254/645 (39%), Gaps = 129/645 (20%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T +Q++ +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 97  YHRHTADQIKEMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 152

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDR----------------LQKQVSQLVYENTFFR 127
           +R E S L++   KL   NK L E  ++                +  +  QL  EN   +
Sbjct: 153 ERHENSLLKSEIEKLKEKNKTLRETINKACCPNCGVPTTSRDGAMPTEEQQLRIENAKLK 212

Query: 128 QQTQNAATL------ATTDTSCESVVTSGQHHLTPQQQHQHPPRD-------ASPAGLLS 174
            + +    +       +T  SC S             Q      D          + ++ 
Sbjct: 213 AEVEKLRAVLGKYAPGSTSPSCSS----------GHDQENRSSLDFYTGIFGLDKSRIMD 262

Query: 175 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGI------VAISHGCTGV------AAR 222
              + + E +  AT     W++    + G + +         A+ +  +G       A+R
Sbjct: 263 TVNQAMEELIKMATVGEPLWLR--SFETGREILNYDEYVREFAVENSSSGKPRRSIEASR 320

Query: 223 ACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVV-NVLPTGSSGTIELLYMQLYA 274
              +V +D  R+ +   D   W            +V+V+ N    G +G ++L++ +L  
Sbjct: 321 DTAVVFVDLPRLVQSFLDVNQWKEMFPCLISKAATVDVICNGEGPGRNGAVQLMFAELQM 380

Query: 275 PTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRP 334
            T + P R+ + +R+   L      + + S++  ++          V+    PSG +I  
Sbjct: 381 LTPMVPTREVYFVRFCKQLSAEQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIED 436

Query: 335 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLRQISQEVS 389
              G   +  V+H++ +  +V  + R +  S      +  +A L     R +  ++  V 
Sbjct: 437 KSNGHCKVIWVEHLECQKSAVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVP 496

Query: 390 QPSVTG----WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS- 444
               TG     GR+  ++  L+QR++  F  A+   +   W+   S   +D+ +    + 
Sbjct: 497 MKDSTGVATLAGRK--SILKLAQRMTWSFCHAIGASSFHTWTKFTSKTGEDIRISSRKNL 554

Query: 445 --PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSID 500
             P + +G+              +LCA  S+ L  V P +L  FLR+   R+EW     D
Sbjct: 555 NDPGEPLGL--------------ILCAVCSVWLP-VSPNVLFDFLRDETRRTEW-----D 594

Query: 501 AYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSD 560
             S+        +L   +  + G  V +    TI+ +E    I  ++  +  E M++ + 
Sbjct: 595 IMSSGGTVQSIANL--AKGQDRGNAVAI---QTIKSKENSVWILQDSYTNPYESMVVYAS 649

Query: 561 IFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
           + +    S             V    D+S   +  I+PSGF IIP
Sbjct: 650 VDITGTQS-------------VMTGCDSS---NLAILPSGFSIIP 678


>gi|356522256|ref|XP_003529763.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 751

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 136/648 (20%), Positives = 256/648 (39%), Gaps = 131/648 (20%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T EQ+  +E L+ E P P   +RQQL  +      + P+Q+K WFQNRR + K   
Sbjct: 97  YHRHTAEQIREMEALFKESPHPDEKQRQQLSNQL----GLAPRQVKFWFQNRRTQIKAIQ 152

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDR----------------LQKQVSQLVYENTFFR 127
           +R E S L+    +L   NK + E  ++                +  +  QL+ EN   +
Sbjct: 153 ERHENSLLKTELDRLREENKAMRETINKSCCPNCGMVTATIDASMSTEEKQLLIENAKLK 212

Query: 128 QQTQNAAT-LATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGL-----LSIAEETLT 181
            + +   T L        S  TS   H   ++            GL     + IA     
Sbjct: 213 AEVEKLRTALGKFSPRTTSPTTSSAGHHDEEENRSSLDFYNGIFGLDKSRIMDIANRATE 272

Query: 182 EFLSKATGTAVEWVQMPGMKPGPDSIG----IVAISHGCTGV--------AARACGLVGL 229
           E +  A      WV+   ++ G D +     +       +G         A+R   +V +
Sbjct: 273 ELIKMANMGEPLWVR--SVETGRDILNYDEYVKEFEVENSGSERPKTFIEASRETEVVFM 330

Query: 230 DPTRVAEILKDRPSWYR-------DCRSVEVV-NVLPTGSSGTIELLYMQLYAPTTLAPA 281
           D  R+ +   D   W            +V+V+ N   +  +G ++L++ +L   T + P 
Sbjct: 331 DLPRLLQSFLDVNQWKEMFPCLISKAATVDVICNGEGSNRNGAVQLMFAELQMLTPMVPT 390

Query: 282 RDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSI 341
           R+ + +R    L D    + + S++  ++          V+    PSG +I     G   
Sbjct: 391 REVYFVRCGKQLSDEQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIEDKSNGHCK 446

Query: 342 IHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLRQISQEVSQPSVTG- 395
           +  V+H++ +  ++  + R +  S      +  +  L     R +  ++  V     TG 
Sbjct: 447 VIWVEHLECQKSTIHTMYRTIVNSGLAFGARHWIETLQLQCERLVFYMATNVPMKDSTGV 506

Query: 396 ---WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMM 449
               GR+  ++  L+QR++  F  A+   +   W+ + S   +D+ +    +   P + +
Sbjct: 507 ATLAGRK--SILKLAQRMTWSFCHAVGASSFHTWTKVTSKTGEDIRISSRKNLNEPGEPL 564

Query: 450 GVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAV 507
           GV              +LCA +S+ L  V P +L  FLR+   R+EW     D  S+   
Sbjct: 565 GV--------------ILCAVSSVWLP-VSPNVLFDFLRDEARRNEW-----DIMSS--- 601

Query: 508 KAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQ-L 566
                           G  +  +A+  + ++   V+ ++ +   +++      +++LQ  
Sbjct: 602 ----------------GGSVQSIANLAKGKDRGNVVNIQKIIQSKDN-----SVWILQDS 640

Query: 567 CSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIP 605
           C+   E+ V      V+AP++            S +  I+PSGF I+P
Sbjct: 641 CTSAYESTV------VYAPVEFAGIQSVLTGCDSSNLAILPSGFSILP 682


>gi|177667009|gb|ACB73218.1| homeodomain protein GL2-like 1 [Gossypium hirsutum]
          Length = 772

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 158/689 (22%), Positives = 266/689 (38%), Gaps = 151/689 (21%)

Query: 7   GGSRDSRD---SGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQL-IRECPI 62
           GGS D  D   + G K      +Y R+TP+Q++ LE L+ ECP P   +R +L  R C  
Sbjct: 72  GGSGDDHDPTTAAGDKPPRKK-RYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLC-- 128

Query: 63  LSNIEPKQIKVWFQNRRCREKQ----------RKEASRLQAVNR---------------- 96
              +E +Q+K WFQNRR + K           R+E  +L+A N                 
Sbjct: 129 ---LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG 185

Query: 97  -----KLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQ 151
                 ++   +LL  EN RL+ ++ ++      F  +      L  +      V T+G 
Sbjct: 186 PAIIGDMSLEEQLLRIENARLKDELDRVCALAGKFLGRPITGPPLPNSSLEL-GVGTNGT 244

Query: 152 HHLTPQQQHQHP-PRDASP---------------AGLLSIAEETLTEFLSKATGTAVEWV 195
              T       P   DA P               +  L +A   + E +  A      W+
Sbjct: 245 FGTTMATTTTLPLGHDALPTMVVPSNRPATTLDRSMFLELALAAMDELVKMAQTDEPLWI 304

Query: 196 Q-MPGMKPGPDSIGIVAISHGCTGV--------AARACGLVGLDPTRVAEILKDRPSWYR 246
           + + G +   +    +     C G+        A+R  G+V ++   + E L D   W  
Sbjct: 305 KNIEGGREMLNHDEYLRTFTPCIGLKPNGFVTEASRETGVVIINSLALVETLMDSNRWAE 364

Query: 247 --DCR--SVEVVNVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL 298
              C        +V+  G  GT    ++L+  +L   + L P R+   LR+     +G  
Sbjct: 365 MFHCMIARTSTTDVISNGMGGTRNGALQLMNAELQILSPLVPVREVSFLRFCKQHAEGVW 424

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
            V + S++      ++ ++  FV    LPSG +++    G S +   +H + +   V ++
Sbjct: 425 AVVDVSVD------TIKESTTFVTCRRLPSGCVVQDMPNGYSKVIWAEHAEYDESQVHQL 478

Query: 359 LRPLYESSTLIAQKTTMAALRHLRQ-------ISQEV---SQPSVTGWGRRPAALRALSQ 408
            RPL  S      +  +AAL+  RQ       +S  V      ++T  GRR  ++  L+Q
Sbjct: 479 YRPLLSSGVGFGAQRWVAALQ--RQCECLAILMSSTVPTRDHTAITASGRR--SMLKLAQ 534

Query: 409 RLSRGFNEALNGFTDEGWSMLESDGID-DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVL 467
           R++  F   +   T   W+ L +  +D DV V    S               P     ++
Sbjct: 535 RMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSIDD------------PGEPPGIV 582

Query: 468 CAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQ 525
            + A+ +   V P  L  FLR    RSEW     D  S      GP             Q
Sbjct: 583 LSAATSVWLPVSPQRLFDFLRNERLRSEW-----DILS----NGGPM------------Q 621

Query: 526 VILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAP 585
            +  +A   +H   + +++   M   +  M++     L + C     +A G+   +V+AP
Sbjct: 622 EMAHIAKGQDHGNCVSLLRASAMNANQSSMLI-----LQETCI----DAAGSL--VVYAP 670

Query: 586 ID---------ASFSDDAPIIPSGFRIIP 605
           +D            S    ++PSGF I+P
Sbjct: 671 VDIPAMHVVMNGGDSAYVALLPSGFAIVP 699


>gi|1814424|gb|AAB41901.1| homeodomain protein AHDP [Arabidopsis thaliana]
          Length = 745

 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 222/564 (39%), Gaps = 110/564 (19%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQL-IRECPILS 64
           SG  +D+ D   +K      +Y R+TP+Q++ LE ++ ECP P   +R +L  R C    
Sbjct: 82  SGEDQDAADKPPRKK-----RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC---- 132

Query: 65  NIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME-------------- 107
            +E +Q+K WFQNRR + K   +R E + L+  N KL A N  + E              
Sbjct: 133 -LETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRNPICTNCGGPA 191

Query: 108 --------------ENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVV---TSG 150
                         EN RL+ ++ ++      F             ++S E  V    +G
Sbjct: 192 MLGDVSLEEHHLRIENARLKDELDRVCNLTGKF----LGHHHNHHYNSSLELAVGTNNNG 247

Query: 151 QHH------------LTPQQQHQHPPRDASPAG-LLSIAEETLTEFLSKATGTAVEWVQ- 196
            H             L PQQQ             LL +A   + E +  A      WV+ 
Sbjct: 248 GHFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVLLELALTAMDELVKLAQSEEPLWVKS 307

Query: 197 MPGMKP--GPDSIGIVAISHGCTGV---AARACGLVGLDPTRVAEILKDRPSWYR----D 247
           + G +     D       S   TG+   A+R  G+V ++   + E L D   W      +
Sbjct: 308 LDGERDELNQDEYMRTFSSTKPTGLATEASRTSGMVIINSLALVETLMDSNRWTEMFPCN 367

Query: 248 CRSVEVVNVLPTGSSGTI----ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCER 303
                  +V+  G +GTI    +L+  +L   + L P R+   LR+     +G   V + 
Sbjct: 368 VARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDV 427

Query: 304 SLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 363
           S++  +       AP   R   LPSG +++    G S +  V+H + +   + ++ RPL 
Sbjct: 428 SIDPVRENSG--GAPVIRR---LPSGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLL 482

Query: 364 ESSTLIAQKTTMAALRHLRQ-------ISQEVS---QPSVTGWGRRPAALRALSQRLSRG 413
            S      +  +A L+  RQ       IS  V+     S+T  GR+  ++  L+QR++  
Sbjct: 483 RSGLGFGSQRWLATLQ--RQCECLAILISSSVTSHDNTSITLGGRK--SMLKLAQRMTFN 538

Query: 414 FNEALNGFTDEGWSMLESDGID-DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKAS 472
           F   ++  +   WS L    +D DV V    S               P     ++ + A+
Sbjct: 539 FCSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDD------------PGEPPGIVLSAAT 586

Query: 473 MLLQDVPPAILLRFLREH--RSEW 494
            +     P  L  FLR    R EW
Sbjct: 587 SVWLPAAPQRLYDFLRNERMRCEW 610


>gi|5702094|gb|AAD47139.1|AF077335_1 Anthocyaninless2 [Arabidopsis thaliana]
          Length = 801

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 136/563 (24%), Positives = 222/563 (39%), Gaps = 109/563 (19%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQL-IRECPILS 64
           SG  +D+ D   +K      +Y R+TP+Q++ LE ++ ECP P   +R +L  R C    
Sbjct: 122 SGEDQDAADKPPRKK-----RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC---- 172

Query: 65  NIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME-------------- 107
            +E +Q+K WFQNRR + K   +R E + L+  N KL A N  + E              
Sbjct: 173 -LETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRNPICTNCGGPA 231

Query: 108 --------------ENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVV--TSGQ 151
                         EN RL+ ++ ++      F             ++S E  V   +G 
Sbjct: 232 MLGDVSLEEHHLRIENARLKDELDRVCNLTGKFL----GHHHNHHYNSSLELAVGTNNGG 287

Query: 152 HH------------LTPQQQHQHPPRDASPAG-LLSIAEETLTEFLSKATGTAVEWVQ-M 197
           H             L PQQQ             LL +A   + E +  A      WV+ +
Sbjct: 288 HFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVLLELALTAMDELVKLAQSEEPLWVKSL 347

Query: 198 PGMKP--GPDSIGIVAISHGCTGV---AARACGLVGLDPTRVAEILKDRPSWYR----DC 248
            G +     D       S   TG+   A+R  G+V ++   + E L D   W      + 
Sbjct: 348 DGERDELNQDEYMRTFSSTKPTGLATEASRTSGMVIINSLALVETLMDSNRWTEMFPCNV 407

Query: 249 RSVEVVNVLPTGSSGTI----ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERS 304
                 +V+  G +GTI    +L+  +L   + L P R+   LR+     +G   V + S
Sbjct: 408 ARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFLRFCKQHAEGVWPVVDVS 467

Query: 305 LNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYE 364
           ++  +       AP   R   LPSG +++    G S +  V+H + +   + ++ RPL  
Sbjct: 468 IDPVRENSG--GAPVIRR---LPSGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLR 522

Query: 365 SSTLIAQKTTMAALRHLRQ-------ISQEVS---QPSVTGWGRRPAALRALSQRLSRGF 414
           S      +  +A L+  RQ       +S  V+     S+T  GR+  ++  L+QR++  F
Sbjct: 523 SGLGFGSQRWLATLQ--RQCECLAILMSSSVTSHDNTSITPGGRK--SMLKLAQRMTFNF 578

Query: 415 NEALNGFTDEGWSMLESDGID-DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASM 473
              ++  +   WS L    +D DV V    S               P     ++ + A+ 
Sbjct: 579 CSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDD------------PGEPPGIVLSAATS 626

Query: 474 LLQDVPPAILLRFLREH--RSEW 494
           +     P  L  FLR    R EW
Sbjct: 627 VWLPAAPQRLYDFLRNERMRCEW 649


>gi|345195186|tpg|DAA34958.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414880175|tpg|DAA57306.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 701

 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 115/497 (23%), Positives = 193/497 (38%), Gaps = 81/497 (16%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---R 85
           R T +Q+E LE  +  C  P   +R+QL       + +   Q+K WFQN+R   K    R
Sbjct: 116 RVTSQQLEILEGFFSICAHPDDSQRKQLSES----TGLSVHQVKFWFQNKRTHVKHLSGR 171

Query: 86  KEASRLQAVNRKLTAMNKLLMEE-----------------NDR----LQKQVSQLVYENT 124
           +E  RL+  N  L   N  L+ +                 ND     L+K+V +L   N 
Sbjct: 172 EENYRLKVENEMLKEENNRLIRQAQSNAPAPAPAPCPRCINDAGHLLLEKEVERLKALNQ 231

Query: 125 FFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLS-IAEETLTEF 183
             +Q+ Q   T   T  + +    SG  H  P+   ++         +L+ +AE    E 
Sbjct: 232 MLQQELQLQGTEGETPVAVDPA--SGAFHPDPEPSLENVFAAQHDGQMLAKLAENAAQEL 289

Query: 184 LSKATGTAVEWVQMPGMK-------------PGPDSIGIVAISHGCTGVAARACGLVGLD 230
           L  A   +  W+ +PG               PG  S+  +A+    T    RA G+V LD
Sbjct: 290 LVLADPESPLWLPVPGGSFETLNMIAYAQTFPGQMSVDAIALKTEAT----RASGVVMLD 345

Query: 231 PTRVAEILKDRPSW------YRDCRSVEVVNVLPTGS----SGTIELLYMQLYAPTTLAP 280
           P  + E L D  S+           + + V   PT       G ++++ ++L  P+ L  
Sbjct: 346 PKSLVEFLMDAESYGTMFPGLVSGAATDKVYNWPTSREESYDGAVQMMTVELAFPSPLVA 405

Query: 281 ARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGS 340
           AR    +R    LE G+  V + SL++              R   +PSG LI+P      
Sbjct: 406 ARKCTFVRCCKKLEQGAFAVVDVSLDDG------------ARCRKMPSGMLIQPIRYNSC 453

Query: 341 IIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQ--EVSQPSVTGWGR 398
            +  +DH+ ++  S+ ++  P        A++   +  R   +I     V+  ++    R
Sbjct: 454 KVSAIDHVRVDDTSIHDIFHPCLSGVLFGARRWVTSMARQCARIRDVFHVTNCTLNVTSR 513

Query: 399 RPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNG 458
               +  L+  L   +  ++  F D+ W+         V   V +     +  +      
Sbjct: 514 GRKTIMKLADNLLADYTSSVAAFPDDAWT---------VQCGVGTEQDIKIMYKRQSEGS 564

Query: 459 FPSMSNAVLCAKASMLL 475
             S + AV+CA AS LL
Sbjct: 565 SSSSNTAVVCACASFLL 581


>gi|162463494|ref|NP_001105493.1| outer cell layer1 [Zea mays]
 gi|5531484|emb|CAB51059.1| OCL1 homeobox protein [Zea mays]
          Length = 784

 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 164/722 (22%), Positives = 281/722 (38%), Gaps = 178/722 (24%)

Query: 3   AVSSG-GSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           A+S+G G+ D  D+          +Y R+TP+Q++ LE L+ ECP P   +R +L +   
Sbjct: 62  AMSAGAGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL- 120

Query: 62  ILSNIEPKQIKVWFQNRRCREKQ----------RKEASRLQAVNRKL------------- 98
               ++P+Q+K WFQNRR R K           ++E  +L+A N  +             
Sbjct: 121 ---GLDPRQVKFWFQNRRTRMKTQLERHENALLKQENDKLRAENMAIREAMRSPMCGSCG 177

Query: 99  --TAMNKLLMEE------NDRLQKQVSQLVYENTFFRQQ---------TQNAATLATTDT 141
               + ++ +EE      N RL+ +++++    T F  +          Q   +L    +
Sbjct: 178 SPAMLGEVSLEEQHLCIENARLKDELNRVYALATKFLGKPMPVLSGPMLQPNLSLPMPSS 237

Query: 142 SCESVVTSGQHHL--------------TPQQQHQHPPR--DASPAGLLSIAEETLTEFLS 185
           S E  V  G   L              +P      P R   ++P  ++ +    L E   
Sbjct: 238 SLELAV-GGLRGLGSIPSLDEFAGGVSSPLGTVITPARATGSAPPPMVGVDRSMLLELAI 296

Query: 186 KATGTAVEWVQ------MPGMKPGPD---------------SIGIVAISHGCTGVAARAC 224
            A    V+  Q      +P +   PD               S+G V    G    A+R  
Sbjct: 297 SAMDELVKLAQVDEPLWLPSLSGSPDKKLLNFEEYAHSFSPSVGAVK-PVGYVSEASRES 355

Query: 225 GLVGLDPT-RVAEILKDRPSWYRDCRSV---------EVVNVLPTGSSGTIELLYMQLYA 274
           GLV +D +  + E L D   W  D  S          EV + +    +G + L+  +L  
Sbjct: 356 GLVIIDNSLALVETLMDVRRW-SDMFSCMIAKATVLEEVTSGIAGSRNGALLLMKAELQV 414

Query: 275 PTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN---TQNGPSMPQAPHFVRAEMLPSGYL 331
            + L P R+   LR+   L +G+  V + S++      N  +   A + +R   LPSG +
Sbjct: 415 LSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGN-IRCRRLPSGCV 473

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQP 391
           ++    G   +  V++ + +  SV ++ RPL  S      +  +A L+   +    +  P
Sbjct: 474 MQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLAILMSP 533

Query: 392 S---------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI-----DDV 437
                     +T  G+R  ++  L++R++  F   ++  +   WS L  DG      +DV
Sbjct: 534 DTVSANDSSVITQEGKR--SMLKLARRMTENFCAGVSASSAREWSKL--DGAAGSIGEDV 589

Query: 438 TVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RS 492
            V    S   P +  GV              VL A+ S+ +  V P  L  FLR+   R+
Sbjct: 590 RVMARKSVDEPGEPPGV--------------VLSARTSVWVP-VAPEKLFNFLRDEQLRA 634

Query: 493 EWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYR 552
           EW     D  S      GP             Q +  +A   EH   + +++   M+  +
Sbjct: 635 EW-----DILS----NGGPM------------QEMANIAKGQEHGNSVSLLRASAMSANQ 673

Query: 553 EDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRI 603
             M++     L + C+    + V      V+AP+D            S    ++PSGF I
Sbjct: 674 SSMLI-----LQETCTDASGSMV------VYAPVDIPAMQLVMNGGDSTYVALLPSGFAI 722

Query: 604 IP 605
           +P
Sbjct: 723 LP 724


>gi|224077468|ref|XP_002305259.1| predicted protein [Populus trichocarpa]
 gi|222848223|gb|EEE85770.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 175/404 (43%), Gaps = 77/404 (19%)

Query: 5   SSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILS 64
           + G S D  ++        N  Y R++ +Q+  LE+ + ECP P   +R+QL RE     
Sbjct: 2   NGGASGDEHEAASNSRNQGNKAYHRHSNQQIHQLEKFFKECPHPDENQRRQLSREL---- 57

Query: 65  NIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME-------------- 107
            +E KQIK WFQN+R ++K   +R + S L+  N ++   N  ++E              
Sbjct: 58  GLEAKQIKFWFQNKRTQKKAQSERADNSVLRLENERIQCENLAIIEALKNVICPACGGPP 117

Query: 108 --ENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT----SCESVVTSGQHHLTPQQQHQ 161
             E +R Q+ + +L  EN   +++ + + +   + T    S   V+T+           +
Sbjct: 118 FGEEER-QRSLQKLKQENARLKEEARKSISQIDSLTPGAGSSHGVLTTN----PGIDLER 172

Query: 162 HPPRDASPA-----GLLSIAEETLTEFLSKATGTAVE--------WVQMPG-MKPGPDSI 207
           +P  D S       G+L + +  + E  + A    V         W++ P   +   D +
Sbjct: 173 NPGLDNSQLVYKRRGILDMEKALMAETAASAADELVRLLRVNEPLWIKSPSDGRYIIDRV 232

Query: 208 GI----------------VAISHGCTGVAARACGLVG--LDPTRVAEILKDRPSWYRDCR 249
           G                 V  S     V      LV   LDP +  ++    P+     R
Sbjct: 233 GYEKLYPRDSHFKSSNARVESSKDSAMVIMPGMDLVDMFLDPNKWMDLF---PTIVTKAR 289

Query: 250 SVEVVNVLPTGS-SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT 308
           ++ ++     G+ +G+++++Y Q++  + L P R+F+ LR    LE G  V+ + S +  
Sbjct: 290 TILLLEAGTVGNRNGSLQMMYEQMHILSPLVPPREFYFLRLCQQLEPGEWVIADISYDFM 349

Query: 309 QNG-PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLE 351
           ++G PS        RA  LPSG +I+    G S +  V+H++++
Sbjct: 350 RDGSPS--------RAWRLPSGCMIQDKSNGCSKVTWVEHVEVD 385


>gi|125527992|gb|EAY76106.1| hypothetical protein OsI_04032 [Oryza sativa Indica Group]
          Length = 736

 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 171/416 (41%), Gaps = 74/416 (17%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--K 86
           R T +Q E LE  +  C  P   +++ L       + +   Q+K WFQN+R + K    K
Sbjct: 72  RLTGKQSEVLEGFFSICGHPDDGQKRHLSET----TGLGLDQVKFWFQNKRTQVKTMCWK 127

Query: 87  EASRLQAVNRKLTAMNKLLMEENDR---------------------LQKQVSQLVYENTF 125
           E       N KL+  N++L +EN R                     L  ++ +L+ ++ +
Sbjct: 128 EE------NYKLSVENEILRDENRRVKIAHCTAICLTCRNSSVQNQLAVEMERLMGQSEW 181

Query: 126 FRQQ------TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEET 179
            +Q+      T  AA LA    S    V SGQH    QQ      ++A  A  L I  E+
Sbjct: 182 LQQEIARSNGTPPAANLAFQLNSSADYVFSGQHD---QQMIAELAKNAMHA--LIILAES 236

Query: 180 LTEFLSKATGTAVEWVQ----MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVA 235
                    G A E +          PG +S   +    G    A RA  +V +D   V 
Sbjct: 237 HVALWFPVPGCAYEVLNKMMAYDQAYPGDNSANAI----GFKTEATRAVSMVMMDYKSVV 292

Query: 236 EILKDRPSWYR----DCRSVEVVNVLPT-----GSSGTIELLYMQLYAPTTLAPARDFWL 286
           + L D P  YR    +  S  V N + T     G +G I+L+ +++  P+ L PAR    
Sbjct: 293 DFLMD-PYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTF 351

Query: 287 LRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVD 346
           LRY +VL +G +VV + SL++            F +   +PSG+LI+        +  ++
Sbjct: 352 LRYCNVLNEGLVVVIDVSLDD---------GSIFSKCRKMPSGFLIQSIRPNSCKVTAIE 402

Query: 347 HMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH---LRQISQEVSQPSVTGWGRR 399
           H+  +   V E+ +P        A++      R    +R +    + P V+  GR+
Sbjct: 403 HVLADDTGVHELYQPCMNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGRK 458


>gi|302787511|ref|XP_002975525.1| hypothetical protein SELMODRAFT_450555 [Selaginella moellendorffii]
 gi|300156526|gb|EFJ23154.1| hypothetical protein SELMODRAFT_450555 [Selaginella moellendorffii]
          Length = 675

 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 175/749 (23%), Positives = 286/749 (38%), Gaps = 182/749 (24%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           ++ R+T  Q++ +E ++ ECP P   +R QL RE      +EP+Q+K WFQNRR + K  
Sbjct: 20  RFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSREL----GLEPRQVKFWFQNRRTQMKVS 75

Query: 84  ----QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS---------------------Q 118
               +  +A + +A N  L A N+ L  EN  +++ +                      Q
Sbjct: 76  IKVFEENQAHQERAENSMLRAENERLRSENIAMREALKNATCPHCGGPATLGEMSYDEQQ 135

Query: 119 LVYENTFFRQQTQ-------NAATLATTDTSCESVVTSGQHHLT----PQQQHQ-HPPRD 166
           L  EN   + + Q        A  L+   +S    VT G   L     P    Q   P  
Sbjct: 136 LRIENAHLKDEVQLDRVSSLAAKYLSKPPSSSALAVTPGPSMLELATRPGGLSQVEKPLV 195

Query: 167 ASPA-----GLLSIAEE-----TLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGC 216
           A  A      LL++A+       L E  +K +    E++Q      GP  +G+       
Sbjct: 196 AELAIIAMEELLALAQSREPLWILEENGAKESLNGEEYMQQFSRGLGPTPVGL------- 248

Query: 217 TGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEV-----VNVLPTGSSGTIE----- 266
                R  GLV ++   + + + D  + + D  S  +       VL TG  G        
Sbjct: 249 KSEVTRDTGLVMMNGAALVDTIMD--ARWMDMFSCIISRALTSEVLSTGVGGNWNNALQL 306

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEML 326
           ++Y +    + L P R+ + LRY     +G   + + S++                    
Sbjct: 307 VMYAEFQVLSPLVPTREAYFLRYCKQHAEGVWAIVDVSVDG------------------- 347

Query: 327 PSGYLIRPCEGGGSIIH---IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ 383
            SG+LI+    G S +    I+ HM+ +   V  + R L  S      K  +A L+  RQ
Sbjct: 348 -SGFLIQDMPNGYSKVSQVTILQHMEYDDRQVNNMYRGLVSSGLAFGAKRWLATLQ--RQ 404

Query: 384 -------ISQEVSQPSVTG-----WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLES 431
                  ++  +S   + G      GRR  ++  L+QR++  F   ++  T   W+ L  
Sbjct: 405 CERLAVLLATNISPRDLGGVISNATGRR--SMLKLAQRMTNNFCAGVSASTVHTWTTLSG 462

Query: 432 DGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH- 490
            G DDV V    S               P     ++ + A+ L   V P  +  FLR+  
Sbjct: 463 SGEDDVRVMTRKSIDN------------PGEPPGIVLSAATSLWMPVSPQRVFEFLRDDR 510

Query: 491 -RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMA 549
            RSE  +S  D  S                    G  +  +AH  +  +   VI L  + 
Sbjct: 511 LRSE-MNSQWDILS-------------------NGGSVQEMAHIAKGHDPGNVISLLRVN 550

Query: 550 HYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------ASFSDDA--PIIPSG 600
                    S++ +LQ  S  DE+     + +V+AP+D           D A   ++PSG
Sbjct: 551 ALNTSQ---SNMLILQE-SSTDESG----SLIVYAPVDIPAMNLVMQGGDPAYVALLPSG 602

Query: 601 FRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMH 660
           F I+P     + P             +G T   +S  SS + G    ++T+AFQ      
Sbjct: 603 FAILP-----EGPR-----------SIGTTPETSSRASSGEPG---CLLTVAFQILVSNV 643

Query: 661 LQENVASMARQYVRGIIA-SVQRVALALS 688
               +   +   V  +I+ +VQR+  ALS
Sbjct: 644 PTAKLNLESVTTVNSLISCTVQRIKTALS 672


>gi|14587301|dbj|BAB61212.1| putative homeobox protein GLABRA2 [Oryza sativa Japonica Group]
          Length = 779

 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 125/547 (22%), Positives = 197/547 (36%), Gaps = 106/547 (19%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T EQ+  +E L+ E P P   +RQQ+ ++      +  +Q+K WFQNRR + K   
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQVSKQL----GLSARQVKFWFQNRRTQIKAVQ 154

Query: 84  QRKEASRLQAVNRKLTAMNKLLME-----------------------------ENDRLQK 114
           +R E S L++   KL   ++ + E                                RL+ 
Sbjct: 155 ERHENSLLKSELEKLQDEHRAMRELAKKPSRCLNCGVVATSSDAAAAATAADTREQRLRL 214

Query: 115 QVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPP----RDASPA 170
           + ++L  E    R     +A        C +   + Q +      H H       D    
Sbjct: 215 EKAKLKAEIERLRGTPGKSAADGIASPPCSASAGAMQTNSRSPPLHDHDGGFLRHDDDKP 274

Query: 171 GLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIG------IVAISHGCTG------ 218
            +L +A   L E +   +     WV+  G++ G D +       +    HG +G      
Sbjct: 275 RILELATRALDELVGMCSSGEPVWVR--GVETGRDILNYDEYVRLFRRDHGGSGDQMAGW 332

Query: 219 --VAARACGLVGLDPTRVAEILKDRPSW-------YRDCRSVEVV-NVLPTGSSGTIELL 268
              A+R CGLV LD   +     D   W            ++E++ N    G  G ++L+
Sbjct: 333 TVEASRECGLVYLDTMHLVHTFMDVDKWKDLFPTMISKAATLEMISNREDDGRDGVLQLM 392

Query: 269 YMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPS 328
           Y +L   T + P R+ +  RY   L      + + S + ++ G     A   VR    PS
Sbjct: 393 YAELQTLTPMVPTRELYFARYCKKLAAERWAIVDVSFDESETG---VHASSAVRCWKNPS 449

Query: 329 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLRQ 383
           G LI     G   +  V+H      +V  + R +  S      +  +AAL     R +  
Sbjct: 450 GCLIEEQNNGRCKMTWVEHTRCRRCTVAPLYRAVTASGVAFGARRWVAALQLQCERMVFA 509

Query: 384 ISQEVSQPSVTG----WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTV 439
           ++  V     TG     GRR  ++  L+ R++        G  D  W             
Sbjct: 510 VATNVPTRDSTGVSTLAGRR--SVLKLAHRMTSSLCRTTGGSCDMAW------------- 554

Query: 440 HVNSSPSKMMGVQLSYVNGFPSMSNA----------VLCAKASMLLQDVPPAILLRFLRE 489
               +P    G          S  NA          + CA AS  L  V P  LL  LR+
Sbjct: 555 --RRAPKGGSGGGGDDDIWLTSRENAGDDPGEPQGLIACAAASTWLP-VNPTALLDLLRD 611

Query: 490 H--RSEW 494
              R EW
Sbjct: 612 ESRRPEW 618


>gi|223950133|gb|ACN29150.1| unknown [Zea mays]
 gi|345193169|tpg|DAA34950.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414876613|tpg|DAA53744.1| TPA: outer cell layer1 [Zea mays]
          Length = 803

 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 159/719 (22%), Positives = 278/719 (38%), Gaps = 172/719 (23%)

Query: 3   AVSSG-GSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           A+S+G G+ D  D+          +Y R+TP+Q++ LE L+ ECP P   +R +L +   
Sbjct: 81  AMSAGAGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL- 139

Query: 62  ILSNIEPKQIKVWFQNRRCREKQ----------RKEASRLQAVNRKL------------- 98
               ++P+Q+K WFQNRR + K           ++E  +L+A N  +             
Sbjct: 140 ---GLDPRQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMAIREAMRSPMCGSCG 196

Query: 99  --TAMNKLLMEE------NDRLQKQVSQLVYENTFFRQQ---------TQNAATLATTDT 141
               + ++ +EE      N RL+ +++++    T F  +          Q   +L    +
Sbjct: 197 SPAMLGEVSLEEQHLCIENARLKDELNRVYALATKFLGKPMPVLSGPMLQPNLSLPMPSS 256

Query: 142 SCESVVTSGQHHL--------------TPQQQHQHPPR--DASPAGLLSIAEETLTEFLS 185
           S E  V  G   L              +P      P R   ++P  ++ +    L E   
Sbjct: 257 SLELAV-GGLRGLGSIPSLDEFAGGVSSPLGTVITPARATGSAPPPMVGVDRSMLLELAI 315

Query: 186 KATGTAVEWVQ------MPGMKPGPD---------------SIGIVAISHGCTGVAARAC 224
            A    V+  Q      +P +   PD               S+G V    G    A+R  
Sbjct: 316 SAMDELVKLAQVDEPLWLPSLSGSPDKKLLNFEEYAHSFSPSVGAVK-PVGYVSEASRES 374

Query: 225 GLVGLDPT-RVAEILKDRPSWYRDCRSV---------EVVNVLPTGSSGTIELLYMQLYA 274
           GLV +D +  + E L D   W  D  S          EV + +    +G + L+  +L  
Sbjct: 375 GLVIIDNSLALVETLMDVRRW-SDMFSCMIAKATVLEEVTSGIAGSRNGALLLMKAELQV 433

Query: 275 PTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN---TQNGPSMPQAPHFVRAEMLPSGYL 331
            + L P R+   LR+   L +G+  V + S++      N  +   A + +R   LPSG +
Sbjct: 434 LSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGN-IRCRRLPSGCV 492

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQP 391
           ++    G   +  V++ + +  SV ++ RPL  S      +  +A L+   +    +  P
Sbjct: 493 MQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLAILMSP 552

Query: 392 S---------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI-----DDV 437
                     +T  G+R  ++  L++R++  F   ++  +   WS L  DG      +DV
Sbjct: 553 DTVSANDSSVITQEGKR--SMLKLARRMTENFCAGVSASSAREWSKL--DGAAGSIGEDV 608

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWA 495
            V    S  +            P     V+ + A+ +   V P  L  FLR+   R+EW 
Sbjct: 609 RVMARKSVDE------------PGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAEW- 655

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDM 555
               D  S      GP             Q +  +A   EH   + +++   M+  +  M
Sbjct: 656 ----DILS----NGGPM------------QEMANIAKGQEHGNSVSLLRASAMSANQSSM 695

Query: 556 IMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIP 605
           ++     L + C+    + V      V+AP+D            S    ++PSGF I+P
Sbjct: 696 LI-----LQETCTDASGSMV------VYAPVDIPAMQLVMNGGDSTYVALLPSGFAILP 743


>gi|338797895|gb|AEI99591.1| HD-Zip IV transcription factor GL9H2 [Triticum durum]
          Length = 683

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 126/638 (19%), Positives = 238/638 (37%), Gaps = 131/638 (20%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---R 85
           R TP+Q + LE  +  C  P   +R  +       + +  +Q++ WFQN+R   K    +
Sbjct: 48  RLTPQQTQVLEGFFGICAHPDENQRMGMSES----TGLTMQQVRFWFQNKRTHMKHVTGK 103

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQK--------------------QVSQLVYENTF 125
           +E  R++A        N++L EEN RL                      +V +L  EN  
Sbjct: 104 EETYRMKA-------QNEMLREENKRLASAAKTSFCPSCVALPGLSPSGEVQRLRQENEQ 156

Query: 126 FRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLS 185
            +QQ       A   +S    +     ++T         R+     +  +A+  + EF+ 
Sbjct: 157 LKQQLSQLRAEAHPSSSRPFQLDPSMENITG--------RENDMDAIAELAQSAMHEFVV 208

Query: 186 KATGTAVEWVQMPGMKPGPDSIGIVAISH------------GCTGVAARACGLVGLDPTR 233
            A      W+ +PG     D +  +A +             G    A RA  +V +D  +
Sbjct: 209 LAEAGGPLWMPVPG--GSFDVLNKMAYAQTFGARSSANVILGFMTEATRADDMVMMDAKQ 266

Query: 234 VAEILKDRPSWYRDC----RSVEVVNVL--PT--GSSGTIELLYMQLYAPTTLAPARDFW 285
           + + + D   +   C     S     +   PT  G +G + L+ ++   P+ L P+R   
Sbjct: 267 IVDYIMDSECYTSFCPGLLTSANTTKIYKWPTSAGYNGAMHLVTVETVFPSPLVPSRKCT 326

Query: 286 LLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIV 345
            +R    +++G++++ + SL+N             V+   +PSG L+R      S + ++
Sbjct: 327 FVRCCRDMQNGTVIIVDVSLDNGDG---------TVKCHKMPSGVLVRSLNSDASQVTVI 377

Query: 346 DHMDLEPWSVPEVLRPLYESSTLIAQK------TTMAALRHLRQISQEVSQPSVTGWGRR 399
           +H+ +    + E+ RP        A++         A +R L  +S+  S  +  G    
Sbjct: 378 EHVQVNDTGLHELYRPSLSGLMFGARRWVSSIVRQSARMRDLFVVSKSASNGNTNGR--- 434

Query: 400 PAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGF 459
              L  ++  L  G+   +      GW++L   G +D              +++SY    
Sbjct: 435 -KTLMKIADGLLAGYASGIAAVPGGGWTILRGAGTED-------------DIRISYRRNN 480

Query: 460 PSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVP 517
              + A++   AS  L  VP  +    L+ +  R +W            V        V 
Sbjct: 481 DDSNTAIVSVCASFHLP-VPHRVTFDLLKNNLLRPKW---------DVLVNGNSVREEVA 530

Query: 518 RAGNFGGQV-----ILPLAHTIEHEEFLEVIKLENMAHYREDMIM---PSDIFLLQLCSG 569
                GG +     IL L      E    ++ L+N ++      M   P +I L+     
Sbjct: 531 VCKGVGGGIDDVVSILHLKDPPTGENRDNIMILQNSSYDVSGAFMVYCPVNIQLMN---- 586

Query: 570 VDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD 607
                       + +P D + S+   + P+GF ++P++
Sbjct: 587 -----------EIMSPSDTAESNKVSLYPTGFYLLPVE 613


>gi|338797899|gb|AEI99593.1| HD-Zip IV transcription factor GL9H1 [Triticum durum]
          Length = 674

 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 111/527 (21%), Positives = 202/527 (38%), Gaps = 120/527 (22%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---R 85
           R  P+Q + LE  +  C  P   +R  +       + +  +Q+K WFQN+R   K    +
Sbjct: 46  RLNPQQTQVLEGFFGICAHPDENQRMGMSES----TGLTMQQVKFWFQNKRTHMKHVTGK 101

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQK--------------------QVSQLVYENTF 125
           +E  R++A        N++L EEN RL                      +V +L  EN  
Sbjct: 102 EETYRMKA-------QNEMLREENKRLASAAKTAFCPACVALPGLNPSVEVQRLRQENES 154

Query: 126 FRQQTQNAATLA--------TTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAE 177
            +QQ       A          D S E+++                 R+     +  +A+
Sbjct: 155 LKQQLSQLRAEAHPSSSRPFQLDPSTENIIG----------------RENDMDAIAELAQ 198

Query: 178 ETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISH-----------GCTGVAARACGL 226
             + EF+  +      W+ +PG     D +  +A +            G    A RA G+
Sbjct: 199 SAMHEFVVLSESGGPLWMPVPG--GSLDVLNKMAYAQTFGAGSSANAIGFMTEATRADGM 256

Query: 227 VGLDPTRVAEILKDRPSWYRDC----RSVEVVNVL--PT--GSSGTIELLYMQLYAPTTL 278
           V +D  ++ + + D   +   C     S     V   PT  G +G + L+ ++   P+ L
Sbjct: 257 VMMDAKQIVDYIMDSECYTSFCPGLVTSANTTKVYKWPTSAGYNGAMHLMTVETVFPSPL 316

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
            P+R    +R    +++G++++ + SL+N              +   +PSG LIR     
Sbjct: 317 VPSRKCTFVRCCRDMQNGTVIIVDVSLDN---------GDGTFKCHKMPSGILIRSLNSD 367

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYES---------STLIAQKTTMAALRHLRQISQEVS 389
            S + +V+H+ +    V E+ RP             S+++ Q    A +R L  +S+  S
Sbjct: 368 ASQVTVVEHVQVNDTGVHELYRPSLSGLMFGARRWVSSIVRQS---ARMRDLFIVSKSAS 424

Query: 390 QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMM 449
             +    GR+   L  ++  L   +   +      GW++L   G +D             
Sbjct: 425 NGNTN--GRK--TLMKIADGLLADYASGIAAVPGSGWTILRGAGTED------------- 467

Query: 450 GVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
            ++++Y       +NAV+   AS  L  VP  +    L+ +  R +W
Sbjct: 468 DIRITYRKNNDDSNNAVVSVCASFHLP-VPLKVTFDLLKNNLLRPKW 513


>gi|53792431|dbj|BAD53269.1| putative transcription factor 1 [Oryza sativa Japonica Group]
 gi|56784273|dbj|BAD81955.1| putative transcription factor 1 [Oryza sativa Japonica Group]
          Length = 629

 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 197/503 (39%), Gaps = 89/503 (17%)

Query: 38  LERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--KEASRLQAVN 95
           + R +  C  P   +++ L       + +   Q+K WFQN+R + K    KE       N
Sbjct: 1   MNRFFSICGHPDDGQKRHLSET----TGLGLDQVKFWFQNKRTQVKTMCWKEE------N 50

Query: 96  RKLTAMNKLLMEENDR---------------------LQKQVSQLVYENTFFRQQ----- 129
            KL+  N++L +EN R                     L  ++ +L+ ++ + +Q+     
Sbjct: 51  YKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQEIARSN 110

Query: 130 -TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKAT 188
            T  AA LA    S    V SGQH    QQ      ++A  A  L I  E+         
Sbjct: 111 GTPPAANLAFQLNSSADYVFSGQHD---QQMIAELAKNAMHA--LIILAESHVALWFPVP 165

Query: 189 GTAVEWVQMPGMK---PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWY 245
           G + E +         PG +S   +    G    A RA  +V +D   V + L D P  Y
Sbjct: 166 GCSYEVLNKMAYDQAYPGDNSANAI----GFKTEATRAVSMVMMDYKSVVDFLMD-PYNY 220

Query: 246 R----DCRSVEVVNVLPT-----GSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDG 296
           R    +  S  V N + T     G +G I+L+ +++  P+ L PAR    LRY +VL +G
Sbjct: 221 RTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEG 280

Query: 297 SLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVP 356
            +VV + SL++            F +   +PSG+LI+        +  ++H+  +   V 
Sbjct: 281 LVVVIDVSLDD---------GSIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVH 331

Query: 357 EVLRPLYESSTLIAQKTTMAALRH---LRQISQEVSQPSVTGWGRRPAALRALSQRLSRG 413
           E+ +P        A++      R    +R +    + P V+  GR+   L  L+  L   
Sbjct: 332 ELYQPCMNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGRK--NLMKLADDLLAS 389

Query: 414 FNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASM 473
           F   +       W           TV + +   K + V         S  NA+L   AS+
Sbjct: 390 FAGGIAATGGGTW-----------TVVIGAGTEKDIRVAYRRTTEGSSSYNAILSVTASL 438

Query: 474 LLQDVPPAILLRFLRE--HRSEW 494
            L  +P       LR   HR +W
Sbjct: 439 RLP-LPMRKTFDLLRNLTHRCKW 460


>gi|242054643|ref|XP_002456467.1| hypothetical protein SORBIDRAFT_03g036820 [Sorghum bicolor]
 gi|241928442|gb|EES01587.1| hypothetical protein SORBIDRAFT_03g036820 [Sorghum bicolor]
          Length = 760

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 115/509 (22%), Positives = 202/509 (39%), Gaps = 108/509 (21%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---R 85
           R T +Q+E LE  +  C  P   +R+QL     +L +    Q+K WFQN+R + K    R
Sbjct: 115 RVTSQQLETLEGFFSICAHPDDNQRRQLSESTGLLLH----QVKFWFQNKRTQVKHLNGR 170

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV------------------YENTFFR 127
           +E       N KL   N+ L EEN+RL++  + ++                   E    +
Sbjct: 171 EE-------NYKLKVENETLKEENNRLKQLQNNIIAPAPCAKCIIDPGRLLLEKEVERLK 223

Query: 128 QQTQNAATLATTDTSCESVV-------TSGQHHLTPQQQH----QHPPRDASPAGLLSIA 176
           +  Q          S +  +         G  HL P  ++    QH  +      L ++A
Sbjct: 224 ELNQMLQQELQLLKSMDDGIPPMAMDSAVGNFHLDPLLENIFVVQHDEQ-----MLANLA 278

Query: 177 EETLTEFLSKATGTAVEWVQMPGMK-------------PGPDSIGIVAISHGCTGVAARA 223
           +    E L  A  ++  W+ +PG               PG  S   + ++   T    RA
Sbjct: 279 QNAAQELLILANPSSALWLNVPGGSFETLNMAAYTETFPGQMSADTITMNTEAT----RA 334

Query: 224 CGLVGLDPTRVAEILKDRPSW------YRDCRSVEVVNVLPTGS----SGTIELLYMQLY 273
             +V LDP  + E L D  S+           +   V   PTG      G ++++ ++L 
Sbjct: 335 SAVVMLDPKSLVEFLMDAESYGTMFPGLVSAAATTKVYSCPTGREECYDGAMQMMTVELV 394

Query: 274 APTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIR 333
            P+ L  AR    +R    LE G++ V + SL++              R   +PSG +I+
Sbjct: 395 FPSPLVAARKCTFVRCVKKLEQGAVAVVDVSLDDG------------ARCRKMPSGLVIQ 442

Query: 334 PCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQK--TTM----AALRHLRQISQE 387
           P       +  +DH+ ++     ++  P        A++  T+M    A +R + Q++  
Sbjct: 443 PIRYNTCKVTAIDHVVVDGTITHDLFAPCLSGLLFGARRWLTSMARQCARIRDVFQVTN- 501

Query: 388 VSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID-DVTVHVNSSPS 446
               +VT  GR+   +  L+  L   F  ++  + ++ W+     G + D+ +   +   
Sbjct: 502 -CTLNVTSRGRK--TIMKLADNLLASFTSSVTAYPEDAWNFQCGLGTEQDIKIMYKTQNE 558

Query: 447 KMMGVQLSYVNGFPSMSNAVLCAKASMLL 475
                  S  +G P+   AV+CA AS L+
Sbjct: 559 -------STSSGSPT---AVVCASASFLV 577


>gi|67966273|emb|CAG38614.1| homeobox protein OCL1 [Zea mays]
          Length = 803

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 158/719 (21%), Positives = 277/719 (38%), Gaps = 172/719 (23%)

Query: 3   AVSSG-GSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           A+S+G G+ D  D+          +Y R+TP+Q++ LE L+ ECP P   +R +L +   
Sbjct: 81  AMSAGAGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRDELSKRL- 139

Query: 62  ILSNIEPKQIKVWFQNRRCREKQ----------RKEASRLQAVNRKL------------- 98
               ++P+Q+K WFQNRR + K           ++E  +L+A N  +             
Sbjct: 140 ---GLDPRQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMAIREAMRSPMCGSCG 196

Query: 99  --TAMNKLLMEE------NDRLQKQVSQLVYENTFFRQQ---------TQNAATLATTDT 141
               + ++ +EE      N RL+ +++++    T F  +          Q   +L    +
Sbjct: 197 SPAMLGEVSLEEQHLCIENARLKDELNRVYALATKFLGKPMPVLSGPMLQPNLSLPMPSS 256

Query: 142 SCESVVTSGQHHL--------------TPQQQHQHPPR--DASPAGLLSIAEETLTEFLS 185
           S E  V  G   L              +P      P R   ++P  ++ +    L E   
Sbjct: 257 SLELAV-GGLRGLGSIPSLDEFAGGVSSPLGTVITPARATGSAPPPMVGVDRSMLLELAI 315

Query: 186 KATGTAVEWVQ------MPGMKPGPD---------------SIGIVAISHGCTGVAARAC 224
            A    V+  Q      +P +   PD               S+G V    G    A+R  
Sbjct: 316 SAMDELVKLAQVDEPLWLPSLSGSPDKKLLNFEEYAHSFSPSVGAVK-PVGYVSEASRES 374

Query: 225 GLVGLDPT-RVAEILKDRPSWYRDCRSV---------EVVNVLPTGSSGTIELLYMQLYA 274
           GLV +D +  + E L D   W  D  S          EV + +    +G + L+  +L  
Sbjct: 375 GLVIIDNSLALVETLMDVRRW-SDMFSCMIAKATVLEEVTSGIAGSRNGALLLMKAELQV 433

Query: 275 PTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN---TQNGPSMPQAPHFVRAEMLPSGYL 331
            + L P R+   LR+   L +G+  V + S++      N  +   A + +R   LPSG +
Sbjct: 434 LSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGN-IRCRRLPSGCV 492

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQP 391
           ++    G   +  V++ + +  SV ++ RPL  S      +  +A L+   +    +  P
Sbjct: 493 MQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLAILMSP 552

Query: 392 S---------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI-----DDV 437
                     +T  G+R  ++  L++R++  F   ++  +   WS L  DG      +DV
Sbjct: 553 DTVSANDSSVITQEGKR--SMLKLARRMTENFCAGVSASSAREWSKL--DGAAGSIGEDV 608

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWA 495
            V    S  +            P     V+ +  + +   V P  L  FLR+   R+EW 
Sbjct: 609 RVMARKSVDE------------PGEPPGVVLSAPTSVWVPVAPEKLFNFLRDEQLRAEW- 655

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDM 555
               D  S      GP             Q +  +A   EH   + +++   M+  +  M
Sbjct: 656 ----DILS----NGGPM------------QEMANIAKGQEHGNSVSLLRASAMSANQSSM 695

Query: 556 IMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIP 605
           ++     L + C+    + V      V+AP+D            S    ++PSGF I+P
Sbjct: 696 LI-----LQETCTDASGSMV------VYAPVDIPAMQLVMNGGDSTYVALLPSGFAILP 743


>gi|356536039|ref|XP_003536548.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 751

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 144/675 (21%), Positives = 267/675 (39%), Gaps = 163/675 (24%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           ++ R+T  Q+  +E  + ECP P   +R+ L RE  ++    P QIK WFQN+R + K +
Sbjct: 77  RHTRHTLHQISEMEAFFKECPHPDEKQRKALGRELGLV----PLQIKFWFQNKRTQVKSQ 132

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVS---------------------QLVYENT 124
           +E    +  N  L   N  L  EN R +  +S                     QL  EN 
Sbjct: 133 QE----RYENNLLRVENDKLRAENSRYRNALSNTSCPNCGAPTTLGEMSFDEQQLRMENA 188

Query: 125 FFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPR---------DASPAGL--- 172
             +++  + + LA    + +S   S  ++  P  Q+Q P R         +  P  +   
Sbjct: 189 RQKEEIDSMSGLAAKYAAGKS--ASNSYYNMPSNQNQMPSRSLDLGVVNNNTQPVAMVGE 246

Query: 173 ----------LSIAEETLTEFLSKATGTAVEWVQ----------MPG------------M 200
                     L +      + +S+    AVE +           +PG            +
Sbjct: 247 MYGGNDPLRELPLLSSFDKDLISEIGLVAVEEINQLTLSADPLWVPGNYGSEVINEDEYL 306

Query: 201 KPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSW---YRDCRSVEVVN-V 256
           +  P  IG   +  G    ++R   +V +   ++ E+L D   W   +    S  V + V
Sbjct: 307 RHFPRGIGPTLL--GARTESSRQTAIVMMHHMKLVEMLMDVNQWSNMFCGIVSRAVTHEV 364

Query: 257 LPTGS----SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGP 312
           L  G      G  +++  +   P+ L P RD + +R++      S  V + S+++ + G 
Sbjct: 365 LSIGDHARYDGAYQVMSAEFQVPSPLVPTRDNYFIRFSKKHAGQSWAVVDISMDHLRPGA 424

Query: 313 SMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQK 372
                    R    PSG +I+    G S +  V+H++++   V  + + L  S+     K
Sbjct: 425 -------VTRTRRRPSGCIIQELPNGYSKVIWVEHVEVDDIEVHNLYKNLVNSTLAFGAK 477

Query: 373 TTMAAL----RHL-RQISQEVSQPSV----TGWGRRPAALRALSQRLSRGFNEALNGFTD 423
             +AA+     HL R ++  + Q ++    +  GR+  ++  L++R+   F+  +   T 
Sbjct: 478 RWIAAIERTCEHLARAMATNIPQGALCVITSHEGRK--SMMKLAERMVLSFSTGVGASTA 535

Query: 424 EGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAIL 483
             W+ L  D +++V V    S               P   + ++ + A+ L   VP   +
Sbjct: 536 NAWTPLPLD-LENVRVMTRKSVDD------------PGRPSGIVLSAATSLWLPVPARRV 582

Query: 484 LRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQV--ILPLAHTIEHEEF 539
             FLR    R++W     D  S+                  G QV  +  +A   +H   
Sbjct: 583 FDFLRSENTRNQW-----DILSS------------------GAQVNELAHIAKGRDHGNS 619

Query: 540 LEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-ASFS------- 591
           + ++++      + +M++     L + C     +A G+   +V+APID AS +       
Sbjct: 620 VSLLRVNTQNVAQNNMLI-----LQESCI----DATGSF--VVYAPIDLASMNLVLGGGN 668

Query: 592 -DDAPIIPSGFRIIP 605
            D   ++PSGF ++P
Sbjct: 669 PDYVALLPSGFAVLP 683


>gi|125572285|gb|EAZ13800.1| hypothetical protein OsJ_03723 [Oryza sativa Japonica Group]
          Length = 679

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 196/501 (39%), Gaps = 89/501 (17%)

Query: 40  RLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--KEASRLQAVNRK 97
           R +  C  P   +++ L       + +   Q+K WFQN+R + K    KE       N K
Sbjct: 27  RFFSICGHPDDGQKRHLSET----TGLGLDQVKFWFQNKRTQVKTMCWKEE------NYK 76

Query: 98  LTAMNKLLMEENDR---------------------LQKQVSQLVYENTFFRQQ------T 130
           L+  N++L +EN R                     L  ++ +L+ ++ + +Q+      T
Sbjct: 77  LSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQEIARSNGT 136

Query: 131 QNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGT 190
             AA LA    S    V SGQH    QQ      ++A  A  L I  E+         G 
Sbjct: 137 PPAANLAFQLNSSADYVFSGQH---DQQMIAELAKNAMHA--LIILAESHVALWFPVPGC 191

Query: 191 AVEWVQMPGMK---PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR- 246
           + E +         PG +S   +    G    A RA  +V +D   V + L D P  YR 
Sbjct: 192 SYEVLNKMAYDQAYPGDNSANAI----GFKTEATRAVSMVMMDYKSVVDFLMD-PYNYRT 246

Query: 247 ---DCRSVEVVNVLPT-----GSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL 298
              +  S  V N + T     G +G I+L+ +++  P+ L PAR    LRY +VL +G +
Sbjct: 247 FFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLV 306

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
           VV + SL++            F +   +PSG+LI+        +  ++H+  +   V E+
Sbjct: 307 VVIDVSLDD---------GSIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHEL 357

Query: 359 LRPLYESSTLIAQKTTMAALRH---LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFN 415
            +P        A++      R    +R +    + P V+  GR+   L  L+  L   F 
Sbjct: 358 YQPCMNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGRK--NLMKLADDLLASFA 415

Query: 416 EALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLL 475
             +       W           TV + +   K + V         S  NA+L   AS+ L
Sbjct: 416 GGIAATGGGTW-----------TVVIGAGTEKDIRVAYRRTTEGSSSYNAILSVTASLRL 464

Query: 476 QDVPPAILLRFLRE--HRSEW 494
             +P       LR   HR +W
Sbjct: 465 P-LPMRKTFDLLRNLTHRCKW 484


>gi|356528926|ref|XP_003533048.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 748

 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 136/649 (20%), Positives = 256/649 (39%), Gaps = 135/649 (20%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T EQ+  +E L+ E P P   +RQ+L ++      + P+Q+K WFQNRR + K   
Sbjct: 96  YHRHTTEQIREMEALFKESPHPDEKQRQKLSQQL----GLAPRQVKFWFQNRRTQIKALQ 151

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDR----------------LQKQVSQLVYENTFFR 127
           +R E S L+    KL    K + E  ++                +  +  QL+ EN   +
Sbjct: 152 ERHENSLLKTELDKLREETKAMRETINKSCCPNCGMVTATIDASMSTEEKQLLIENAKLK 211

Query: 128 QQTQNAAT-LATTDTSCESVVTSGQHHLTPQQQHQHPPRDA----SPAGLLSIAEETLTE 182
            + +   T L        S  TS   H   + ++             + ++ +A     E
Sbjct: 212 AEVEKLRTALGKFSPRTTSPTTSSAGHDEEENRNSLGFYSVLFGLDKSRIMDVANRATEE 271

Query: 183 FLSKATGTAVEWVQMPGMKPGPDSIG----IVAISHGCTGV--------AARACGLVGLD 230
            +  AT     WV+   ++ G + +     +  ++   +G         A+R   +V +D
Sbjct: 272 LIKMATMGEPLWVR--SVETGREILNYDEYVKEMAAENSGSERPKTFIEASRETEVVFMD 329

Query: 231 PTRVAEILKDRPSWYR-------DCRSVEVV-NVLPTGSSGTIELLYMQLYAPTTLAPAR 282
             R+ +   D   W            +V+V+ N   +  +G ++L++ +L   T + P R
Sbjct: 330 LPRLLQSFLDVNQWKEMFPCLISKAVTVDVISNGEGSNRNGAVQLMFAELQMLTPMVPTR 389

Query: 283 DFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSII 342
           + + +R    L D    + + S++  ++          V+    PSG +I     G   +
Sbjct: 390 EVYFVRCCKQLSDEQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCIIEDKSNGHCKV 445

Query: 343 HIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLRQISQEVSQPSVTG-- 395
             V+H++ +  ++  + R +  S      +  +A L     R +  ++  V     TG  
Sbjct: 446 IWVEHLECQKSTIHTMYRTIVNSGLAFGARHWIATLQLHCERLVFYMATNVPMKDSTGVA 505

Query: 396 --WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMG 450
              GR+  ++  L+QR++  F  A+   +   W+M+ S   +D+ +    +   P + +G
Sbjct: 506 TLAGRK--SILKLAQRMTWSFCHAIGASSFHTWTMVTSKTGEDIRISSRKNLNDPGEPLG 563

Query: 451 VQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVK 508
           V LS V               S +   V   +L  FLR+   RSEW     D  S+    
Sbjct: 564 VILSAV---------------SSVWLPVSTNVLFDFLRDEARRSEW-----DIMSS---- 599

Query: 509 AGPCSLPVPRAGNFGGQV--ILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQ- 565
                         GG V  +  LA   +    + + K+++           + +++LQ 
Sbjct: 600 --------------GGSVQSVANLAKGKDRGNVVNIQKIQS---------KDNSVWILQD 636

Query: 566 LCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIP 605
            C+   E+ V      V+AP++            S +  I+PSGF I+P
Sbjct: 637 SCTSAYESMV------VYAPVEFAGIQSVLTGCDSSNLAILPSGFSILP 679


>gi|76782208|gb|ABA54874.1| baby boom interacting protein 1A [Brassica napus]
          Length = 718

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 155/386 (40%), Gaps = 70/386 (18%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T +Q++ LE  + ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 39  RYHRHTAQQIQRLESSFKECPHPDDKQRNQLSREL----GLAPRQIKFWFQNRRTQLKAQ 94

Query: 84  -QRKEASRLQAVNRKLTAMNKLLMEE--------------NDRLQKQVSQLVYENTFFRQ 128
            +R + + L+A N K+   N  + E               N+       +L  EN   R 
Sbjct: 95  HERADNNALKAENDKIRCENIAIREAIKHAICPNCGGPPVNEDPYFDEHKLRIENAHLRD 154

Query: 129 QTQNAATLATTDTS---CESVVTSGQHHLTP-----------------QQQHQHPPRDAS 168
           + +  +T+A+          + T    H++P                    H HP  + +
Sbjct: 155 ELERMSTVASKYMGRPISSHLSTLHPLHISPLDLSMTGPSLDFDLLPGSSMHSHPNNNLA 214

Query: 169 PAGLL------SIAEETLTEFLSKATGTAVEWVQMPGMKPGPD---------SIGIVAIS 213
               +       IA   + E L         W +  G +   D           G    +
Sbjct: 215 TISEMDKPLMNDIALTAMEELLRLFNTNEPLWTRADGGREILDLGSYENLFPRSGNRGKN 274

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYR----DCRSVEVVNVLPTGSSGTIE--- 266
           H     A+R+ G+V ++   + ++  D   W         S + + V+ +G  GT E   
Sbjct: 275 HNVRTEASRSSGIVFMNAMTLVDMFMDGVKWGELFPCIVASSKTLAVVSSGMGGTHEGAL 334

Query: 267 -LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
            L+Y ++   + L   R+F  LRY  ++E GS +V   S +  Q    + Q+ H  +   
Sbjct: 335 HLMYEEMAVLSPLVATREFCELRYCQMIEQGSWIVVNVSYHLPQ---FVSQSSHSYK--- 388

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLE 351
            PSG LI+    G S +  V+H++ E
Sbjct: 389 FPSGCLIQDMPNGYSKVTWVEHVETE 414


>gi|361069599|gb|AEW09111.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
          Length = 68

 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 2/69 (2%)

Query: 600 GFRIIPLDSGKD-TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFE 658
           GFR+IPL+S  D +  PNRTLDLASALEVG TG + SGDS T   + +SV+TIAFQF +E
Sbjct: 1   GFRVIPLESRTDGSGGPNRTLDLASALEVGSTGTRTSGDSGTNS-NLRSVLTIAFQFTYE 59

Query: 659 MHLQENVAS 667
            HL+ENVA+
Sbjct: 60  SHLRENVAA 68


>gi|383131484|gb|AFG46558.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131486|gb|AFG46559.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131488|gb|AFG46560.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131490|gb|AFG46561.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131492|gb|AFG46562.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131494|gb|AFG46563.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131496|gb|AFG46564.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
          Length = 68

 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 2/69 (2%)

Query: 600 GFRIIPLDSGKD-TPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFE 658
           GFR+IPL+S  D +  PNRTLDLASALEVG TG + SGDS T   + +SV+TIAFQF +E
Sbjct: 1   GFRVIPLESRTDGSGGPNRTLDLASALEVGSTGTRTSGDSGTSS-NLRSVLTIAFQFTYE 59

Query: 659 MHLQENVAS 667
            HL+ENVA+
Sbjct: 60  SHLRENVAA 68


>gi|357444035|ref|XP_003592295.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355481343|gb|AES62546.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 842

 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 166/774 (21%), Positives = 287/774 (37%), Gaps = 184/774 (23%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K  
Sbjct: 59  RYHRHTPNQIQELESFFKECPHPDEKQRLDLSKRL----GLENKQVKFWFQNRRTQMKTQ 114

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 114
            +R E   L+  N KL   N ++ E                            EN RL+ 
Sbjct: 115 LERHENIMLRQENDKLRGENSMMKEAMVNPICNNCGGPAIPGQILFEEHQIRIENARLKD 174

Query: 115 QVSQL-VYENTFFRQ---QTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHP------- 163
           +++++    N F  +      N   L T+++  E +               +P       
Sbjct: 175 ELNRICALTNKFLGKPISSLANPMALPTSNSGLE-LGIGRNGFGGGSSSLGNPLPMGLDL 233

Query: 164 ------PRDASPAGLLS--------------IAEETLTEFLSKATGTAVEWVQ-MPGMKP 202
                 P  +SP GL+               +A   + E L  A   +  W++ + G + 
Sbjct: 234 GDGRSMPGISSPMGLMGSSSDVQLERSALIDLALAAMDELLKMAQTDSPVWIKGLDGERD 293

Query: 203 GPDSIGIVAISHGCTG--------VAARACGLVGLDPTRVAEILKDRPSWYRD------C 248
             +      +   C G         A R  G+V ++   + E L D  + Y D       
Sbjct: 294 MLNQEEYARLISSCIGPKPAGFVTEATRDTGIVIINSLALVETLMD-ANRYADMFQSMIA 352

Query: 249 RSVEVVNVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERS 304
           RS   ++VL  G  GT    I L++ ++   + L P R   +LR+     +G   V + S
Sbjct: 353 RSAN-LDVLSGGIGGTRNGAIHLMHTEVQLLSPLVPVRQVRILRFCKQHAEGVWAVVDVS 411

Query: 305 LNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYE 364
           +   + G     A  F+    LPSG +++    G S +  ++H + +   V ++ RPL  
Sbjct: 412 V---EIGHDPSNAQPFISCRRLPSGCIVQDMPNGYSKVTWIEHWEYDESIVHQLYRPLLI 468

Query: 365 SSTLIAQKTTMAALRHLRQ-------ISQEVSQPSVTGW---GRRPAALRALSQRLSRGF 414
           S         +A L+  RQ       +S  +S    T     GRR  ++  L+QR++  F
Sbjct: 469 SGFGFGAHRWIATLQ--RQCEGLAILMSSSISNDDHTALSQAGRR--SMLKLAQRMTNNF 524

Query: 415 NEALNGFTDEGWSMLESDGI-DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASM 473
              +   +   W  L+   + DD+ V    +               P     ++ + A+ 
Sbjct: 525 CSGVCASSARKWDSLQMGTLSDDMRVMTRKNVDD------------PGEPPGIVLSAATS 572

Query: 474 LLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLA 531
           +   V    L  FLR+   RSEW     D  S      GP             Q ++ +A
Sbjct: 573 VWMPVSRQRLFDFLRDERLRSEW-----DILS----NGGPM------------QEMVHIA 611

Query: 532 HTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDA--- 588
                   + +++   +      M++  + ++   CS V           V+AP+D    
Sbjct: 612 KGQGQGNCVSLLRANAVNANDSSMLILQETWMDTSCSVV-----------VYAPVDGQSL 660

Query: 589 ----SFSDDA--PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQC 642
               S  D A   ++PSGF I+P   G D                 P+G   S  +  + 
Sbjct: 661 NVVMSGGDSAYVALLPSGFAIVP--DGND-----------------PSGYGMSNGTLQKG 701

Query: 643 GSTK---SVITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALALSPSRF 692
           G++    S++T+ FQ          +   +   V  +I+ ++Q++  AL   R 
Sbjct: 702 GASDGGGSLLTVGFQILVNSLPTAKLTMESVDTVNNLISCTIQKIKAALRVGRL 755


>gi|15242290|ref|NP_200030.1| homeobox-leucine zipper protein HDG7 [Arabidopsis thaliana]
 gi|75180477|sp|Q9LTK3.1|HDG7_ARATH RecName: Full=Homeobox-leucine zipper protein HDG7; AltName:
           Full=HD-ZIP protein HDG7; AltName: Full=Homeodomain
           GLABRA 2-like protein 7; AltName: Full=Homeodomain
           transcription factor HDG7; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 7
 gi|8885530|dbj|BAA97460.1| homeodomain transcription factor-like [Arabidopsis thaliana]
 gi|332008796|gb|AED96179.1| homeobox-leucine zipper protein HDG7 [Arabidopsis thaliana]
          Length = 682

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 105/447 (23%), Positives = 170/447 (38%), Gaps = 68/447 (15%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T  Q++ LE  + ECP P+  +R +L ++      +E KQIK WFQNRR + K   
Sbjct: 61  YHRHTSYQIQELESFFKECPHPNEKQRLELGKKL----TLESKQIKFWFQNRRTQMKTQL 116

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEEN--------------DRLQKQVSQLVYENTFFRQQ 129
           +R E   L+  N KL   N  L E                  +  +  QL  EN   +++
Sbjct: 117 ERHENVILKQENEKLRLENSFLKESMRGSLCIDCGGAVIPGEVSFEQHQLRIENAKLKEE 176

Query: 130 TQNAATLATT----DTSCESVVTSGQHHLTPQQQHQHPPRDASPAG-----LLSIAEETL 180
                 LA        S E     G          QH P     +G      + +A E +
Sbjct: 177 LDRICALANRFIGGSISLEQPSNGGIG-------SQHLPIGHCVSGGTSLMFMDLAMEAM 229

Query: 181 TEFLSKATGTAVEW---VQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEI 237
            E L  A      W    +   M   P S               R  GLV ++   + E 
Sbjct: 230 DELLKLAELETSLWSSKSEKGSMNHFPGS---------------RETGLVLINSLALVET 274

Query: 238 LKDRPSWYR--DC-----RSVEVVNVLPTGS-SGTIELLYMQLYAPTTLAPARDFWLLRY 289
           L D   W    +C      ++EV++    GS +G+I L+  +    + L P +    LRY
Sbjct: 275 LMDTNKWAEMFECIVAVASTLEVISNGSDGSRNGSILLMQAEFQVMSPLVPIKQKKFLRY 334

Query: 290 TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMD 349
                DG   V + S +  +   ++     +  ++M PSG +I+    G S +  ++H +
Sbjct: 335 CKQHGDGLWAVVDVSYDINRGNENLKS---YGGSKMFPSGCIIQDIGNGCSKVTWIEHSE 391

Query: 350 LEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQPSVTGWGRR-PAALRALS 407
            E      + +PL  SS  +     +A L R     +  +S    TG       ++  L+
Sbjct: 392 YEESHTHSLYQPLLSSSVGLGATKWLATLQRQCESFTMLLSSEDHTGLSHAGTKSILKLA 451

Query: 408 QRLSRGFNEALNGFTDEGWSMLESDGI 434
           QR+   F   +       W  L ++ +
Sbjct: 452 QRMKLNFYSGITASCIHKWEKLLAENV 478


>gi|218193817|gb|EEC76244.1| hypothetical protein OsI_13678 [Oryza sativa Indica Group]
          Length = 378

 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQ-IKVWFQN 77
           K  MD+GKYV YTP QVEALER+Y ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF  
Sbjct: 136 KAGMDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFPK 195

Query: 78  RR 79
           ++
Sbjct: 196 QK 197


>gi|297741089|emb|CBI31820.3| unnamed protein product [Vitis vinifera]
          Length = 885

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 123/522 (23%), Positives = 198/522 (37%), Gaps = 103/522 (19%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           KY R+T EQ+  LE  + E P P   +R  L R+     N+EP+Q+K WFQNRR + K  
Sbjct: 39  KYHRHTQEQINELETCFKEWPHPDEKQRLDLSRKL----NLEPRQVKFWFQNRRTQMKNQ 94

Query: 84  -QRKEASRLQAVNRKLTAMN----------------------KLLMEENDRLQKQVSQLV 120
            +R E   L+  N KL   N                       + +EEN        QL 
Sbjct: 95  LERHENVMLRQENDKLRVENVAIKDAVRNPICNHCGGVAMLGNITIEEN--------QLR 146

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGL-------- 172
            EN   R +      LA                +TP       PR +S   L        
Sbjct: 147 VENAQLRDELSRICGLAEKFLG---------RPVTPLASPIALPRPSSNLELEVAGNGSV 197

Query: 173 -LSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
            + +A   + E L  A   +  W  M  +  G +++            A+R  G+V ++ 
Sbjct: 198 FVELAVTAMDELLRLAQADSPIW--MTSLDGGKETL----------NPASRETGMVMINS 245

Query: 232 TRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIELLYMQLYAPTTLAPARD 283
             + E L D   W +    V       +VL +G      G ++L++ +L   + L P R 
Sbjct: 246 LALVETLMDGSRWAQMFPCVIAKASTTDVLSSGIGRTRHGALQLMHAELQVLSPLVPVRQ 305

Query: 284 FWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIH 343
              LR+     +G   V + S++   +G S+     FV    L SG +++    G + + 
Sbjct: 306 VKFLRFCKQHGEGLWAVVDVSIDTALDGASINS---FVNCRRLLSGCVVQDLSNGYTRVT 362

Query: 344 IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVS-------QPSVTG 395
            ++H + +  +V  + R L  S         +A L R    I+  +S        P +T 
Sbjct: 363 WIEHSEYDESAVHYLYRSLLSSGLGFGALRWLATLQRQCESIAILLSSTVPCEDHPVLTQ 422

Query: 396 WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI-DDVTVHVNSSPSKMMGVQLS 454
            GRR  +L  L+ R+   F   +   T   W+ L    + +DV V    S +        
Sbjct: 423 AGRR--SLLQLTNRMRDNFCAGVCASTVRMWNKLHVASLGEDVKVMTRKSMN-------- 472

Query: 455 YVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEW 494
                P     V+ + A+ +   +    L  FLR+   RS+W
Sbjct: 473 ----IPGEPPGVILSAATSVWMPIMHQQLFNFLRDERQRSKW 510


>gi|356542838|ref|XP_003539872.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 727

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 130/549 (23%), Positives = 222/549 (40%), Gaps = 112/549 (20%)

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
           L+ +A+     +L+   GT+    +   ++  P  IG       C   A+R   +V ++ 
Sbjct: 255 LIGMAQMGEPLWLTTLDGTSTMLNEDEYIRSFPRGIGPKPSGFKCE--ASRETAVVIMNH 312

Query: 232 TRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----IELLYMQLYAPTTLAPARD 283
             + EIL D   W      +      + VL TG +G     ++++  +L  PT L P R+
Sbjct: 313 VNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQLPTPLVPTRE 372

Query: 284 FWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIH 343
            + +RY     DG+  V + SL+N + GPS        R    PSG LI+    G S + 
Sbjct: 373 SYFVRYCKQHADGTWAVVDVSLDNLRPGPS-------ARCRRRPSGCLIQEMPNGYSKVT 425

Query: 344 IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQ--PSV-----TG 395
            V+H++++   V  + + L  S      K  +A L R   +++  ++   P+V     T 
Sbjct: 426 WVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNIPTVDVGVITN 485

Query: 396 WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGVQ 452
              R + ++ L++R+   F   ++  T   W+ L   G DDV V    S   P +  G+ 
Sbjct: 486 QDGRKSMMK-LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI- 543

Query: 453 LSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAG 510
                        VL A  S  L  VPP  +  FLR+   R+EW     D  S       
Sbjct: 544 -------------VLSAATSFWLP-VPPKRVFDFLRDENSRNEW-----DILS------- 577

Query: 511 PCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQ-LCSG 569
                        G V+  +AH     +    + L  +          S++ +LQ  C+ 
Sbjct: 578 ------------NGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQ---SNMLILQESCT- 621

Query: 570 VDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLD 620
              N+ G+   +++AP+D             D   ++PSGF I+P      T S N +  
Sbjct: 622 ---NSTGSF--VIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP----DGTTSHNGSGG 672

Query: 621 LASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA-S 679
           +    E GP+G               S++T+AFQ   +      ++  +   V  +IA +
Sbjct: 673 IG---ETGPSG---------------SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACT 714

Query: 680 VQRVALALS 688
           V+R+  +LS
Sbjct: 715 VERIKASLS 723



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 57  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 112

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E + L+  N KL A N
Sbjct: 113 HERHENTNLRTENEKLRADN 132


>gi|413944021|gb|AFW76670.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 732

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 132/547 (24%), Positives = 212/547 (38%), Gaps = 132/547 (24%)

Query: 40  RLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNR 96
           R++ ECP P   +R  L RE      +EP+QIK WFQNRR + K   +R +   L+A N 
Sbjct: 77  RMFKECPHPDENQRAALSREL----GLEPRQIKFWFQNRRTQMKAQHERADNCFLRAEND 132

Query: 97  KLTAMNKLLME---------------------------ENDRLQKQVSQLV-----YENT 124
           K+   N  + E                           EN RL++++ ++      Y   
Sbjct: 133 KIRCENITMREALKNVICPSCGGPPVDEDFFDEQKLRMENARLKEELDRVSSITSKYLGR 192

Query: 125 FFRQQ----TQNAATL------------ATTDTSCESVVTSGQHHLTPQQQHQHPPRDAS 168
            F Q     T + ++L             + D    S  +SG  +  P      P  +  
Sbjct: 193 PFTQMPPVPTMSVSSLDLSVGGMGSLGGPSLDLDLLSGCSSGLPYQVPA-----PVTEME 247

Query: 169 PAGLLSIAEETLTEFLSKATGTAVEWVQ-MPG---------------MKPG----PDSIG 208
              ++ +A   + E +  A      WV+ +PG                KPG    P  I 
Sbjct: 248 RPMMVDMAARAMDELIRLAQAGEQIWVKGVPGDAREVLDVGTYDSLFAKPGAAFRPPDIN 307

Query: 209 IVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR----DCRSVEVVNVLPTGSSGT 264
           + A         +R  GLV +    + ++  D   W           + V+VL  G  G 
Sbjct: 308 VEA---------SRDSGLVFMSAVALVDVFMDTNKWMEFFPGIVSKAQTVDVLVNGLGGR 358

Query: 265 IE---LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHF- 320
            E   ++Y +L+  T + P R+   LRY   +E G   V + SL   ++        H+ 
Sbjct: 359 SESLIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLEGQRDA-------HYG 411

Query: 321 --VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTLIAQKTTMAA 377
              R+  +PSG LI     G S +  V+HM++E      VL R L  S         +AA
Sbjct: 412 VPSRSRRMPSGCLIADMSNGYSKVTWVEHMEIEQMLPINVLYRNLVLSGAAFGAHRWLAA 471

Query: 378 LRHLRQISQEVSQ--------PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSML 429
           L+   +    V+           VT  G+R  ++  LSQR+   F  +L+    + W++L
Sbjct: 472 LQRACERFASVATLGVPHHDVAGVTPEGKR--SMTKLSQRMVSSFCASLSSSPLQRWTLL 529

Query: 430 ESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE 489
              G  DV+V V++  S   G             N V+ + A+ +   VP   +  F+R+
Sbjct: 530 S--GTTDVSVRVSTHRSTDSG-----------QPNGVVLSAATSIWLPVPGDHVFAFVRD 576

Query: 490 H--RSEW 494
              RS+W
Sbjct: 577 ENARSQW 583


>gi|224063979|ref|XP_002301331.1| predicted protein [Populus trichocarpa]
 gi|222843057|gb|EEE80604.1| predicted protein [Populus trichocarpa]
          Length = 790

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 123/521 (23%), Positives = 208/521 (39%), Gaps = 107/521 (20%)

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR--DCR--SVEVV 254
           GMKP            G    A+R  G+V ++   + E L D   W     C        
Sbjct: 341 GMKPS-----------GFVSEASRETGMVIINSLALVETLMDSNRWAEMFPCMIARTSTT 389

Query: 255 NVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQN 310
           +V+ +G  GT    ++L+  +L+  + L P R+   LR+     +G   V + S++  ++
Sbjct: 390 DVIASGMGGTRNGSLQLMQAELHVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRD 449

Query: 311 GPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIA 370
               P  P FV    LPSG +++    G S +  V+H   +   + ++ RP+  S     
Sbjct: 450 TSGAP--PTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAQYDERQIHQLYRPVISSGMGFG 507

Query: 371 QKTTMAALRHLRQ-------ISQEV---SQPSVTGWGRRPAALRALSQRLSRGFNEALNG 420
            +  +A L+  RQ       +S  V      ++T  GRR  ++  L+QR++  F   +  
Sbjct: 508 AQRWIATLQ--RQCECLAILLSSNVPSRDHTAITTSGRR--SMLKLAQRMTDNFCAGVCA 563

Query: 421 FTDEGWSMLESDGID-DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
            T   W+ L +  +D DV V    S               P     ++ + A+ +   V 
Sbjct: 564 STVHKWNKLNAGNVDEDVRVMTRKSVDD------------PGEPPGIVLSAATSVWLPVS 611

Query: 480 PAILLRFLREHR--SEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHE 537
           P  L  FLR  R  SEW     D  S      GP             Q +  +A   +H 
Sbjct: 612 PQRLFDFLRNERLRSEW-----DILS----NGGPM------------QEMAHIAKGQDHG 650

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDA-------SF 590
             + +++   M   +  M++     L + C     +A G+   +V+AP+D        + 
Sbjct: 651 NCVSLLRASAMNANQSSMLI-----LQETCI----DAAGSL--VVYAPVDTPAMHVVMNG 699

Query: 591 SDDA--PIIPSGFRIIPLDSG-KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKS 647
            D A   ++PSGF I+P   G +D PS N           GPT N   G        + S
Sbjct: 700 GDSAYVALLPSGFAIVPDGPGSRDPPSTNG----------GPTANNVGGQERV----SGS 745

Query: 648 VITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
           ++T+AFQ          +   + + V  +I+ +VQ++  AL
Sbjct: 746 LLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL 786



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 14/105 (13%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE-C 60
           M  +SG  +D+ D+  +K      +Y R+TP+Q++ LE L+ ECP P   +R +L R  C
Sbjct: 70  MDGASGDDQDAADNPPRKK-----RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLC 124

Query: 61  PILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMN 102
                +E +Q+K WFQNRR + K   +R E S L+  N KL A N
Sbjct: 125 -----LETRQVKFWFQNRRTQMKTQLERHENSLLRQDNDKLRAEN 164


>gi|414876612|tpg|DAA53743.1| TPA: outer cell layer1 [Zea mays]
          Length = 702

 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 135/599 (22%), Positives = 236/599 (39%), Gaps = 131/599 (21%)

Query: 3   AVSSG-GSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           A+S+G G+ D  D+          +Y R+TP+Q++ LE L+ ECP P   +R +L +   
Sbjct: 81  AMSAGAGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL- 139

Query: 62  ILSNIEPKQIKVWFQNRRCREKQ----------RKEASRLQAVNRKL------------- 98
               ++P+Q+K WFQNRR + K           ++E  +L+A N  +             
Sbjct: 140 ---GLDPRQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMAIREAMRSPMCGSCG 196

Query: 99  --TAMNKLLMEE------NDRLQKQVSQLVYENTFFRQQ---------TQNAATLATTDT 141
               + ++ +EE      N RL+ +++++    T F  +          Q   +L    +
Sbjct: 197 SPAMLGEVSLEEQHLCIENARLKDELNRVYALATKFLGKPMPVLSGPMLQPNLSLPMPSS 256

Query: 142 SCESVVTSGQHHL--------------TPQQQHQHPPR--DASPAGLLSIAEETLTEFLS 185
           S E  V  G   L              +P      P R   ++P  ++ +    L E   
Sbjct: 257 SLELAV-GGLRGLGSIPSLDEFAGGVSSPLGTVITPARATGSAPPPMVGVDRSMLLELAI 315

Query: 186 KATGTAVEWVQ------MPGMKPGPD---------------SIGIVAISHGCTGVAARAC 224
            A    V+  Q      +P +   PD               S+G V    G    A+R  
Sbjct: 316 SAMDELVKLAQVDEPLWLPSLSGSPDKKLLNFEEYAHSFSPSVGAVK-PVGYVSEASRES 374

Query: 225 GLVGLDPT-RVAEILKDRPSWYRDCRSV---------EVVNVLPTGSSGTIELLYMQLYA 274
           GLV +D +  + E L D   W  D  S          EV + +    +G + L+  +L  
Sbjct: 375 GLVIIDNSLALVETLMDVRRWS-DMFSCMIAKATVLEEVTSGIAGSRNGALLLMKAELQV 433

Query: 275 PTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN---TQNGPSMPQAPHFVRAEMLPSGYL 331
            + L P R+   LR+   L +G+  V + S++      N  +   A + +R   LPSG +
Sbjct: 434 LSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGN-IRCRRLPSGCV 492

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQP 391
           ++    G   +  V++ + +  SV ++ RPL  S      +  +A L+   +    +  P
Sbjct: 493 MQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLAILMSP 552

Query: 392 S---------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI-----DDV 437
                     +T  G+R  ++  L++R++  F   ++  +   WS L  DG      +DV
Sbjct: 553 DTVSANDSSVITQEGKR--SMLKLARRMTENFCAGVSASSAREWSKL--DGAAGSIGEDV 608

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
            V    S  +            P     V+ + A+ +   V P  L  FLR+   R+EW
Sbjct: 609 RVMARKSVDE------------PGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAEW 655


>gi|115455597|ref|NP_001051399.1| Os03g0769800 [Oryza sativa Japonica Group]
 gi|50872455|gb|AAT85055.1| putative homeodomain leucine-zipper protein Hox9 [Oryza sativa
           Japonica Group]
 gi|108711284|gb|ABF99079.1| Homeobox domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|113549870|dbj|BAF13313.1| Os03g0769800 [Oryza sativa Japonica Group]
 gi|215712388|dbj|BAG94515.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 242

 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQ-IKVWFQN 77
           K  MD+GKYV YTP QVEALER+Y ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF  
Sbjct: 161 KAGMDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFPK 220

Query: 78  RR 79
           ++
Sbjct: 221 QK 222


>gi|108711285|gb|ABF99080.1| Homeobox domain containing protein, expressed [Oryza sativa
           Japonica Group]
          Length = 226

 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQ-IKVWFQN 77
           K  MD+GKYV YTP QVEALER+Y ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF  
Sbjct: 161 KAGMDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFPK 220

Query: 78  RR 79
           ++
Sbjct: 221 QK 222


>gi|224134761|ref|XP_002327482.1| predicted protein [Populus trichocarpa]
 gi|222836036|gb|EEE74457.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 158/388 (40%), Gaps = 64/388 (16%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           SG   ++ +SG +        Y R+T +Q+  LE+ + ECP P+  +R+QL RE      
Sbjct: 6   SGDEHEAFNSGNK----GKKAYHRHTCQQILQLEKFFKECPHPNEKQRRQLSREL----G 57

Query: 66  IEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME--------------- 107
           +E KQIK WFQNRR +EK   +R + S L+  N ++   N  + E               
Sbjct: 58  LEAKQIKFWFQNRRTQEKAQSERSDNSVLRTENERIHCENLSIREAMKNVICPACGGHPF 117

Query: 108 -ENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPR- 165
            E +R Q  + +L  EN   R++ +   T           +  G++   P     H    
Sbjct: 118 GEEER-QLNLQKLRQENARLREEAKELPTFVQNQRMGNPGIDWGRN---PGSDISHFAYR 173

Query: 166 -----DASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG-----------MKPGPDSIGI 209
                D   A +   A   + E +         W++ P             +  P +   
Sbjct: 174 LEGIPDMENALMAETAAGAMDELIRLLRVNEPFWIKSPSDGRLILDRLSYERIYPRAAHF 233

Query: 210 VAISHGCTGVAARACGLVGLDPTRVAEILKDRPSW-------YRDCRSVEVVNVLPTGS- 261
             IS      +++    V +    + ++  D   W         + R++ V+     G+ 
Sbjct: 234 --ISRNARVESSKDSATVTMPGMDLVDMFLDPNKWVDLFPTIVTEARTIHVLEAGTVGNR 291

Query: 262 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 321
            G+++++Y Q++  + L P R+F+ LR    LE G  V+ + S +  +   S P A    
Sbjct: 292 HGSLQMMYEQMHILSPLVPPREFYFLRLCLQLEPGQWVIADVSYDYLKESGSPPCAWR-- 349

Query: 322 RAEMLPSGYLIRPCEGGGSIIHIVDHMD 349
               LPSG +I+    G S I  V+H++
Sbjct: 350 ----LPSGCMIQDMPNGCSKIIWVEHVE 373


>gi|222625870|gb|EEE60002.1| hypothetical protein OsJ_12734 [Oryza sativa Japonica Group]
          Length = 201

 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQ-IKVWFQN 77
           K  MD+GKYV YTP QVEALER+Y ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF  
Sbjct: 136 KAGMDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFPK 195

Query: 78  RR 79
           ++
Sbjct: 196 QK 197


>gi|357168220|ref|XP_003581542.1| PREDICTED: homeobox-leucine zipper protein ROC4-like [Brachypodium
           distachyon]
          Length = 790

 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 179/769 (23%), Positives = 282/769 (36%), Gaps = 196/769 (25%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGK-YVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           + V SGG     D     M     + YVR++ EQ++ L+ L+ +CP P  M+R +L R  
Sbjct: 65  LDVVSGGGFGRDDDAACGMPRKRKRPYVRHSSEQIQELQALFDKCPHPDEMQRAELSRRL 124

Query: 61  PILSNIEPKQIKVWFQNRRCREKQ---RKEASRLQAVNRKLTAMNKLLMEE-------ND 110
                ++P Q+K WFQNRR + K    R E  +L+  N +L A N  + E        N 
Sbjct: 125 ----FLDPSQVKFWFQNRRTQTKAKLVRDENVQLRQENDRLRAENLCIREAMRHPVCGNC 180

Query: 111 RLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHL-TPQQQHQHPPRDAS- 168
                +  L  E    R Q        +   +  S        L  P Q HQ  P   S 
Sbjct: 181 GRPVVLGVLSLEEQHLRAQNARLTEELSRVCAASSEFLGKSISLPAPLQTHQPEPMPGSR 240

Query: 169 --PAG-------LLSIAEETLTEFL---SKATGTAV------------------------ 192
             PA          ++A  T+TEF    S ++GTA+                        
Sbjct: 241 VQPAAGGVGSVPSTTVASSTITEFTGTASTSSGTAIMTMSEEPLEIAGIDKSVLLELAKS 300

Query: 193 ---EWVQMPGMK-------------PGPDSIG---IVAISHGCTGV--------AARACG 225
              E V+M  M+             P  +++     +     C GV        A+R  G
Sbjct: 301 AMDELVKMAQMEDPLWTPSVSLSDSPAKETLNYEEYLNTFSPCIGVKPAGFQSEASRESG 360

Query: 226 LV-GLDPTRVAEILKDRPSW--------YRDCRSVEVVNVLPTGSSGTIELLYMQLYAPT 276
           +V   D   + E L D   W         +     E+   +     G + L+  +L   +
Sbjct: 361 IVISDDSVALVEALMDERRWSNIFSCMVAKSSTIAEISTGVAGSRDGALLLIQAELQVLS 420

Query: 277 TLAPARDFWLLRYTSVLEDGSLVVCERSLNN--TQNGPSMPQAPHFVRAEMLPSGYLI-R 333
            L P R    LR+   L +G+  V + S++      G +       +    LPSG L+ +
Sbjct: 421 PLVPIRKATFLRFCKQLGEGAWAVVDVSIDGLVVDQGLAAASTTANMNCRRLPSGCLVQQ 480

Query: 334 PCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVS---- 389
               G   +  V+H + +  SV     PLY S  L+     + A R L  + ++      
Sbjct: 481 DTRNGFCKVKWVEHAEYDESSV----HPLYRS--LLRSGLALGAGRWLATLQRQCKCWAT 534

Query: 390 -QPSVTGWGRRPA--------ALRALSQRLSRGFNEALNGFTDEGWSMLE--SDGI-DDV 437
            Q  V  W +  +        +L  L+QR+   F   ++  +   WS L+  +D I +DV
Sbjct: 535 LQSCVAAWEQYSSDVLAAGTQSLLKLAQRMMESFFSGVSASSALEWSKLDGFTDNIGNDV 594

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWA 495
            +    S  +          G P     VLCA  S+ +  V P  L +FL +   R+EW 
Sbjct: 595 RIIERKSVDE---------PGVP--PGVVLCAATSVWML-VTPERLFQFLCDEGTRAEW- 641

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDM 555
               D  S      GP             Q +  +A   +    + +++  N  + +++ 
Sbjct: 642 ----DILST----GGPM------------QEVTNIAKGQQDGNTVSLLR-TNTTNTQQNG 680

Query: 556 IMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------ASFSDDA--PIIPSGFRIIPL 606
           I+     L + C+    + V      V+AP+D        S  D A  P++PSGF I+P 
Sbjct: 681 IL----ILQETCTDASGSMV------VYAPVDIPAMHLVMSGGDSASVPLLPSGFVILP- 729

Query: 607 DSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
                                GPT     GD    CG   S++T AFQ 
Sbjct: 730 --------------------DGPT---IPGDGHKTCG---SLLTFAFQI 752


>gi|77378036|gb|ABA70759.1| baby boom interacting protein 1B [Brassica napus]
          Length = 711

 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 152/385 (39%), Gaps = 69/385 (17%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T +Q++ LE  + ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 33  RYHRHTAQQIQRLESSFKECPHPDDKQRNQLSREL----GLAPRQIKFWFQNRRTQLKAQ 88

Query: 84  -QRKEASRLQAVNRKLTAMNKLLMEE--------------NDRLQKQVSQLVYENTFFRQ 128
            +R + + L+A N K+   N  + E               N+       +L  EN   R 
Sbjct: 89  HERADNNALKAENDKIRCENIAIREAIKHAICPNCGSPPVNEDPYFDEHKLRIENAHLRD 148

Query: 129 QTQNAATLATTDTS---CESVVTSGQHHLTP-----------------QQQHQHPPR--- 165
             +  +T+A+          + T    H++P                    H  P     
Sbjct: 149 DLERMSTVASKYMGRPISSHLSTLHPLHISPLDLSMTGPSLDFDLLPGSSMHSQPNNLAT 208

Query: 166 --DASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD---------SIGIVAISH 214
             D     +  IA   + E L         W +  G +   D           G    +H
Sbjct: 209 ISDMDKPLMNDIALTAMEELLRLFNTNEPLWTRGDGGREILDLGSYENLFPRSGNRGKNH 268

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYR----DCRSVEVVNVLPTGSSGTIE---- 266
                A+R+ G+V ++   + ++  D   W         S + + V+ +G  GT E    
Sbjct: 269 NVRTEASRSSGIVFMNAMTLVDMFMDGVKWGELFPCIVASSKTLAVVSSGMGGTHEGALH 328

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEML 326
           L+Y ++   + L   R+F  LRY  ++E GS +V   S +  Q    + Q+ H  +    
Sbjct: 329 LMYEEMAVLSPLVATREFCELRYCQMIEQGSWIVVNVSYHLPQ---FVSQSSHSYK---F 382

Query: 327 PSGYLIRPCEGGGSIIHIVDHMDLE 351
           PSG LI+    G S +  V+H++ E
Sbjct: 383 PSGCLIQDMPSGYSKVTWVEHVETE 407


>gi|356520461|ref|XP_003528880.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 829

 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 115/503 (22%), Positives = 204/503 (40%), Gaps = 91/503 (18%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTGS-SGTI 265
           +G    A+R  G+V ++   + E L D   W            + EV++    G+ +G +
Sbjct: 385 NGFVSEASRENGMVIINSLALVETLMDSNRWAEMFPCIIARTSTTEVISSGINGTRNGAL 444

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +L++ +L   + L P R+   LR+     +G   V + S+++ +       AP FV    
Sbjct: 445 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSIRESSG---APTFVNCRR 501

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH----- 380
           LPSG +++    G S +  V+H + +   V ++ RPL  S      +  +A L+      
Sbjct: 502 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWVATLQRQCECL 561

Query: 381 ---LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID-D 436
              +   +      ++T  GRR  ++  L+QR++  F   +   T   W+ L +  +D D
Sbjct: 562 AILMSSAAPSRDHSAITAGGRR--SMMKLAQRMTNNFCAGVCASTVHKWNKLNAGNVDED 619

Query: 437 VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
           V V    S               P     ++ + A+ +   V P  L  FLR+   RSEW
Sbjct: 620 VRVMTRKSVDD------------PGEPPGIVLSAATSVWLPVSPHRLFDFLRDERLRSEW 667

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRED 554
                D  S      GP             Q +  +A   +H   + +++   +   +  
Sbjct: 668 -----DILS----NGGPM------------QEMAHIAKGQDHGNAVSLLRASAINSNQSS 706

Query: 555 MIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------ASFSDDA--PIIPSGFRIIP 605
           M++     L + C     +A G+   +V+AP+D        +  D A   ++PSGF I+P
Sbjct: 707 MLI-----LQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP 755

Query: 606 LDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENV 665
              G   P PN           GPT     GD+     S  S++T+AFQ          +
Sbjct: 756 DGPGSRGP-PN-----------GPTSTTNGGDNGVTRVS-GSLLTVAFQILVNSLPTAKL 802

Query: 666 ASMARQYVRGIIA-SVQRVALAL 687
              + + V  +I+ +VQ++  AL
Sbjct: 803 TVESVETVNNLISCTVQKIKAAL 825



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 22/115 (19%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE-C 60
           M  +SG   D+ D+  +K      +Y R+TP+Q++ LE L+ ECP P   +R +L R  C
Sbjct: 113 MDGASGDEHDAADNPPRKK-----RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLC 167

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQ 115
                +E +Q+K WFQNRR + K + E              N LL +END+L+ +
Sbjct: 168 -----LETRQVKFWFQNRRTQMKTQLERHE-----------NTLLRQENDKLRAE 206


>gi|359490389|ref|XP_003634081.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Vitis vinifera]
          Length = 783

 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 160/711 (22%), Positives = 267/711 (37%), Gaps = 148/711 (20%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           KY R+T EQ+  LE  + E P P   +R  L R+     N+EP+Q+K WFQNRR + K  
Sbjct: 104 KYHRHTQEQINELETCFKEWPHPDEKQRLDLSRKL----NLEPRQVKFWFQNRRTQMKNQ 159

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 114
            +R E   L+  N KL   N  + +                            EN +L+ 
Sbjct: 160 LERHENVMLRQENDKLRVENVAIKDAVRNPICNHCGGVAMLGNITIEENQLRVENAQLRD 219

Query: 115 QVSQL--VYENTFFRQQTQNAATLATTDTSCE---SVVTSGQHHLT-------------P 156
           ++S++  + E    R  T  A+ +A    S      V  +G   L              P
Sbjct: 220 ELSRICGLAEKFLGRPVTPLASPIALPRPSSNLELEVAGNGFGGLNSGGTPLPMGPLTRP 279

Query: 157 QQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV-QMPGMKPGPDSIGIVAISHG 215
                  P ++S    + +A   + E L  A   +  W+  + G K   + +  +     
Sbjct: 280 GMMGVEKPFNSSV--FVELAVTAMDELLRLAQADSPIWMTSLDGGKETLNPVEYMRTFSP 337

Query: 216 CTGV--------AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG--- 260
           C G+        A+R  G+V ++   + E L D   W +    V       +VL +G   
Sbjct: 338 CIGLKPSGFVTEASRETGMVMINSLALVETLMDGSRWAQMFPCVIAKASTTDVLSSGIGR 397

Query: 261 -SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
              G ++L++ +L   + L P R    LR+     +G   V + S++   +G S+     
Sbjct: 398 TRHGALQLMHAELQVLSPLVPVRQVKFLRFCKQHGEGLWAVVDVSIDTALDGASINS--- 454

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL- 378
           FV    L SG +++    G + +  ++H + +  +V  + R L  S         +A L 
Sbjct: 455 FVNCRRLLSGCVVQDLSNGYTRVTWIEHSEYDESAVHYLYRSLLSSGLGFGALRWLATLQ 514

Query: 379 RHLRQISQEVS-------QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLES 431
           R    I+  +S        P +T  GRR  +L  L+ R+   F   +   T   W+ L  
Sbjct: 515 RQCESIAILLSSTVPCEDHPVLTQAGRR--SLLQLTNRMRDNFCAGVCASTVRMWNKLHV 572

Query: 432 DGI-DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE- 489
             + +DV V    S +             P     V+ + A+ +   +    L  FLR+ 
Sbjct: 573 ASLGEDVKVMTRKSMN------------IPGEPPGVILSAATSVWMPIMHQQLFNFLRDE 620

Query: 490 -HRSEWADSSIDAYSAAAVKAGPCS--LPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLE 546
             RS+W     D  S      GP    + +P+       V L   +     +   +I  E
Sbjct: 621 RQRSKW-----DILS----NGGPMQEMIHIPKGQTSSNCVSLLRPNARNQNDNTMLILQE 671

Query: 547 NMAHYREDMIM--PSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRII 604
             A     +I+  P D+  ++                V    D+SF     ++PSGF I+
Sbjct: 672 TWADASGSLIVYAPLDVASMR---------------AVMTGGDSSF---VALLPSGFAIV 713

Query: 605 PLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
           P              D +S      +G  A G S+   G   S++T+AFQ 
Sbjct: 714 P--------------DGSSGYGDDWSGKLARGSSNKGSG---SLLTVAFQI 747


>gi|40539067|gb|AAR87324.1| expressed protein [Oryza sativa Japonica Group]
          Length = 115

 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/59 (69%), Positives = 47/59 (79%), Gaps = 1/59 (1%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQ-IKVWFQNRR 79
           MD+GKYV YTP QVEALER+Y ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF  ++
Sbjct: 53  MDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFPKQK 111


>gi|345195190|tpg|DAA34960.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414587876|tpg|DAA38447.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 750

 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 133/543 (24%), Positives = 211/543 (38%), Gaps = 85/543 (15%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR------- 81
           R+T +Q++ LE  + +C  P    RQ+L  +      I  +Q+K WFQNRR +       
Sbjct: 68  RFTVQQLQQLESSFQKCSHPDDEMRQELAAKV----GISARQVKFWFQNRRSQIKVRSCG 123

Query: 82  ---EKQRKEASRLQAVNRKL---------------TAMNKL-LMEENDRLQKQVSQLVYE 122
               K R++ + L A N +L               T M K  LM+EN +L++  S    E
Sbjct: 124 TENNKYRRQNAELLATNMELKEQLKGMTCSRCDAPTIMQKWQLMDENAKLREMYSLASAE 183

Query: 123 NTFFRQQTQNAATLATTDTSCESVVTSGQHHLTP-QQQHQHPPRDASPAGLLSIAEETLT 181
            T   Q+     ++   D +   +VTS    + P            +   LLS  E  + 
Sbjct: 184 LTKLMQEANLPPSVILEDMA---LVTS----MNPLSSNASSSRSTINQDELLSYVECAIK 236

Query: 182 EFLSKATGTAVEWVQMPG----------MKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
           EF          W+   G           +  P   G +    G    A R   +V    
Sbjct: 237 EFEMLVRDGTPLWLPTIGGDVLNSKEYACQRFPRLHGTIR-PEGFVVEATRDTAIVKGSA 295

Query: 232 TRVAEILKDRPSWYRD-------CRSVEVVNVLPTGSSGTI--ELLYMQ--LYAPTTLAP 280
             + +IL D P WY+         R+  V+   P  S   +  ELL +   L   +   P
Sbjct: 296 PDIVDILTDVPRWYKAFPCIVAALRAYHVIFSGPFASGNVLIQELLQINVDLSVESPRPP 355

Query: 281 ARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGS 340
            R+   LR T    +G  VV + S+N+ Q       + H  +  MLPSG LI+    G  
Sbjct: 356 LRNMKFLRITKQNANGDFVVVDVSINDVQGIHEQQGSQH--KHTMLPSGCLIKDKGDGYC 413

Query: 341 IIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQI----SQEVSQPSVTG 395
            +  + H + E  SVP + R  Y+S         +A+L RH   +    S +V    V+G
Sbjct: 414 QVTWIVHAEYEEASVPPLFRQFYQSGLAFGASRWLASLQRHCEYMVVKHSIQVPTGCVSG 473

Query: 396 WGRRPAA------LRALSQRLSRGFNEALNGF-TDEGWSMLESDG---IDDVTVHVNSSP 445
            G    +      L  L+QR+   F +  +G  T E  +++   G   +      +  + 
Sbjct: 474 SGVLTLSALGRWNLLELAQRMMAIFYKTTSGLPTVEPGNIVTRWGRGCMGTTGEMLEPAV 533

Query: 446 SKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL--REHRSEWADSSIDAYS 503
             ++G     ++G PS    VL A  ++ L   PP  +  +L   + R EW     DA+ 
Sbjct: 534 RMVLGNYFGAMDGQPS-PLQVLSATTTVWLPGTPPESVFNYLCNGQRRGEW-----DAFV 587

Query: 504 AAA 506
            A 
Sbjct: 588 CAG 590


>gi|186511404|ref|NP_001118907.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
 gi|332656527|gb|AEE81927.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
          Length = 570

 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 174/436 (39%), Gaps = 81/436 (18%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQL-IRECPILS 64
           SG  +D+ D   +K      +Y R+TP+Q++ LE ++ ECP P   +R +L  R C    
Sbjct: 122 SGEDQDAADKPPRKK-----RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC---- 172

Query: 65  NIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME-------------- 107
            +E +Q+K WFQNRR + K   +R E + L+  N KL A N  + E              
Sbjct: 173 -LETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRNPICTNCGGPA 231

Query: 108 --------------ENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVV---TSG 150
                         EN RL+ ++ ++      F             ++S E  V    +G
Sbjct: 232 MLGDVSLEEHHLRIENARLKDELDRVCNLTGKF----LGHHHNHHYNSSLELAVGTNNNG 287

Query: 151 QHH------------LTPQQQHQHPPRDASPAG-LLSIAEETLTEFLSKATGTAVEWVQ- 196
            H             L PQQQ             LL +A   + E +  A      WV+ 
Sbjct: 288 GHFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVLLELALTAMDELVKLAQSEEPLWVKS 347

Query: 197 MPGMKP--GPDSIGIVAISHGCTGV---AARACGLVGLDPTRVAEILKDRPSWYR----D 247
           + G +     D       S   TG+   A+R  G+V ++   + E L D   W      +
Sbjct: 348 LDGERDELNQDEYMRTFSSTKPTGLATEASRTSGMVIINSLALVETLMDSNRWTEMFPCN 407

Query: 248 CRSVEVVNVLPTGSSGTI----ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCER 303
                  +V+  G +GTI    +L+  +L   + L P R+   LR+     +G   V + 
Sbjct: 408 VARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDV 467

Query: 304 SLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 363
           S++  +       AP   R   LPSG +++    G S +  V+H + +   + ++ RPL 
Sbjct: 468 SIDPVRENSG--GAPVIRR---LPSGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLL 522

Query: 364 ESSTLIAQKTTMAALR 379
            S      +  +A L+
Sbjct: 523 RSGLGFGSQRWLATLQ 538


>gi|345195182|tpg|DAA34956.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413917511|gb|AFW57443.1| putative homeobox/lipid-binding domain family protein isoform 1
           [Zea mays]
 gi|413917512|gb|AFW57444.1| putative homeobox/lipid-binding domain family protein isoform 2
           [Zea mays]
          Length = 769

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 149/679 (21%), Positives = 246/679 (36%), Gaps = 158/679 (23%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE  + E P P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 82  RYHRHTQHQIQELEAFFKEYPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 137

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVS------------------------QLVY 121
           +E       N +L A N+ L  EN R +  ++                         L  
Sbjct: 138 QERHE----NMQLRAENEKLRAENARYKDALANASCPSCGGPAATAVIGEMSFDEHHLRV 193

Query: 122 ENTFFRQQTQNAATLAT-----------------TDTSCESVVTSGQHHLTPQ------- 157
           EN   R +    +T+A                     +      S  HHL P        
Sbjct: 194 ENARLRDEVDRISTIAAKYVGKPAGSLLLLPPNNLSNNVSGPALSSHHHLLPGGTDVFGG 253

Query: 158 -QQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGC 216
             +H     D     ++ +A   + E +  A      W+  P +     +   +      
Sbjct: 254 LHRHAGGGFDFDKGLVVELAVAAMEELVRMALLGEPLWI--PALAVDGATTETLNEEEYA 311

Query: 217 TGVAARACG---------------LVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVL 257
            G   R  G               +V ++   + E+L D   W     S+      + VL
Sbjct: 312 RGFFPRGVGPKLPELRSEASREAVVVIMNHVSLIEMLMDVNQWSTLFSSIVSRAATLEVL 371

Query: 258 PTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPS 313
            TG +G     ++L+  +   P+ L P R+   LRY     DGS  V + S+        
Sbjct: 372 STGVAGNYNGALQLMTAEFQMPSPLVPTRECQFLRYCKQHTDGSWAVVDVSVEGQL--LR 429

Query: 314 MPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYES-------- 365
                   R    PSG LI+    G S +  V+H + +   V ++ RPL  S        
Sbjct: 430 TGSRQGRGRGRRRPSGCLIQEMPNGYSRVTWVEHAEADDMMVHDLYRPLVCSGLAFGARR 489

Query: 366 --STLIAQ----KTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALN 419
             STL  Q     + MA+   +   +   +   VT    R + +R L++R+   F   + 
Sbjct: 490 WASTLERQCERLASAMASGVVVPAAAAGPAAGVVTSPEGRRSMMR-LAERMVASFCGGVT 548

Query: 420 GFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
             T   W+ L   G +DV V    S               P     ++   A+     V 
Sbjct: 549 ASTTHQWTTLSGSGAEDVRVMTRKSVDD------------PGRPPGIILNAATSFWLPVA 596

Query: 480 PAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQV--ILPLAHTIE 535
           PA +  FLR+   RSEW     D  S                   GG V  +  +A+  +
Sbjct: 597 PARVFGFLRDDATRSEW-----DMLSN------------------GGDVQEMAHIANGRD 633

Query: 536 HEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------- 587
           H   + +++++N    + +M+      +LQ C     +A G+   +++AP+D        
Sbjct: 634 HGNAVSLLRVDNANSNQGNML------ILQECC---TDATGSY--VIYAPVDVVAMNVVL 682

Query: 588 -ASFSDDAPIIPSGFRIIP 605
                D   ++PSGF I+P
Sbjct: 683 NGGDPDYVALLPSGFAILP 701


>gi|357131009|ref|XP_003567136.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ROC9-like [Brachypodium distachyon]
          Length = 758

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 155/743 (20%), Positives = 259/743 (34%), Gaps = 171/743 (23%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T EQV  +E ++ E P P   +RQQL  +      + P+Q+K WFQNRR + K   
Sbjct: 89  YHRHTAEQVRVMEAVFKESPHPDEKQRQQLSEQL----GLSPRQVKFWFQNRRTQIKAIQ 144

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDR---------------------LQKQVSQLVYE 122
           +R E S L++    +   N+ + E   R                       +Q  QL  E
Sbjct: 145 ERHENSLLKSELENVQKENRAMRELARRPSRCANCGVEAASSDDVDPAAAARQEEQLQLE 204

Query: 123 NTFFRQQTQN----AATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPA-------G 171
           N   + + +          +TD       ++G   L  Q   ++P  D            
Sbjct: 205 NARLKAEIEKLRATXGKAVSTDGVASPAFSAGTVLL--QTNSRNPVEDYGGGLTGHDKQS 262

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKP------------GPDSIGIVAISHGCTGV 219
           +L +A   L E  +  +     WV+                  G D  G      G +  
Sbjct: 263 ILELAGRALEELTTMCSSGEPLWVRSLETGRDILNYDEYLRLFGRDDDGSGDQRAGWSVE 322

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR----DCRSVEVVNVLPTGSS-------GTIELL 268
           A+R  G+V +D T++     D   W             ++V+ TG +       G ++L+
Sbjct: 323 ASRESGVVYIDATQLVHAFMDVNQWKELFLPMIAKASTLDVIRTGENDDDDGPDGVVQLM 382

Query: 269 YMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPS 328
           + ++   T + P R+ +  RY   L        + S +    G   P  P   R    PS
Sbjct: 383 FAEVQMLTPMVPTRELYFARYCKKLAAEKWATVDVSFDKADAGGMDPSPP--ARCWKNPS 440

Query: 329 GYLIRPCEGGGSIIHIVDHMDL-EPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLR 382
           G +I     G S +  V+H    E    P + R +  S      +  +A L     R + 
Sbjct: 441 GCIIEEQTNGHSRVTWVEHTRRPESAGAPSMYRAVTASGLAFGARRWLATLQLQCERMVF 500

Query: 383 QISQEVSQPSVTG----WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
            ++  V      G     GRR  ++  L+ R++     ++ G     WS +   G  D+ 
Sbjct: 501 SVATNVPTRDSNGVSTLAGRR--SVLKLAHRMTASLCRSIGGSRGLAWSRVTRAGAGDIR 558

Query: 439 VHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWAD 496
           V    S             G P     ++CA  S  L  V P  LL F+R+   R EW D
Sbjct: 559 VTSRRS-----------AGGEP--QGLIVCAVLSTWLP-VSPTALLDFVRDESRRPEW-D 603

Query: 497 SSIDAYS-------AAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMA 549
           +++   +       A     G C+         GG+ I+                     
Sbjct: 604 ATLSGGTVQRRVNLAKGKDRGNCAASSSAGAQHGGKWIVQ-------------------- 643

Query: 550 HYREDMIMPSDIFLLQLCSGVDENAVGNCAELV-FAPIDASF---------SDDAPIIPS 599
                                D +   +C  +V +AP+DA+          S    ++P 
Sbjct: 644 ---------------------DSSCTSSCEAIVAYAPVDAAVLQPVISGHDSSGVAVLPC 682

Query: 600 GFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEM 659
           GF ++P   G +   P      A        G+ A+G          S++T+AFQ     
Sbjct: 683 GFAVVP--DGLEYSRP------AVITSSSRKGDVAAG----------SLVTVAFQVLASS 724

Query: 660 HLQENVASMARQYVRGIIASVQR 682
            L   ++  + + V G+++   R
Sbjct: 725 SLTATLSPDSAETVIGLVSCTLR 747


>gi|218189094|gb|EEC71521.1| hypothetical protein OsI_03822 [Oryza sativa Indica Group]
          Length = 759

 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 119/519 (22%), Positives = 190/519 (36%), Gaps = 74/519 (14%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 86
           Y R+T EQ+  +E L+ E P P   +RQQ ++E    S ++ +  K+  ++R  RE  +K
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQAVQERHENSLLKSELEKLQDEHRAMRELAKK 158

Query: 87  EASRLQ----AVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTS 142
            +  L     A +    A          RL+ + ++L  E    R     +A        
Sbjct: 159 PSRCLNCGVVATSSDAVAAATAADTREQRLRLENAKLKAEIERLRGTPGKSAADGVASPP 218

Query: 143 CESVVTSGQHHLTPQQQHQHPP----RDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           C +   + Q +      H H       D     +L +A   L E +   +     WV+  
Sbjct: 219 CSASAGAMQTNSRSPPLHDHDGGFLRHDDDKPRILELATRALDELVGMCSSGEPVWVR-- 276

Query: 199 GMKPGPDSIG------IVAISHGCTG--------VAARACGLVGLDPTRVAEILKDRPSW 244
           G++ G D +       +    HG +G         A+R CGLV LD  ++     D   W
Sbjct: 277 GVETGRDILNYDEYVRLFRRDHGGSGDQMAGWTVEASRECGLVYLDTMQLVHTFMDVDKW 336

Query: 245 -------YRDCRSVEVV-NVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDG 296
                       ++E++ N    G  G ++L+Y +L   T + P R+ +  RY   L   
Sbjct: 337 KDLFPTMISKAATLEMISNREDDGRDGVLQLMYAELQTLTPMVPTRELYFARYCKKLAAE 396

Query: 297 SLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVP 356
              + + S + ++ G     A   VR    PSG LI     G   +  V+H      +V 
Sbjct: 397 RWAIVDVSFDESETG---VHASSAVRCWKNPSGCLIEEQNNGRCKMTWVEHTRCRRCTVA 453

Query: 357 EVLRPLYESSTLIAQKTTMAAL-----RHLRQISQEVSQPSVTG----WGRRPAALRALS 407
            + R +  S      +  +AAL     R +  ++  V     TG     GRR  ++  L+
Sbjct: 454 PLYRAVTASGVAFGARRWVAALQLQCERMVFAVATNVPTRDSTGVSTLAGRR--SVLKLA 511

Query: 408 QRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNA-- 465
            R++        G  D  W                 +P    G          S  NA  
Sbjct: 512 HRMTSSLCRTTGGSRDMAW---------------RRAPKGGSGGGGDDDIWLTSRENAGD 556

Query: 466 --------VLCAKASMLLQDVPPAILLRFLREH--RSEW 494
                   + CA AS  L  V P  LL  LR+   R EW
Sbjct: 557 DPGEPQGLIACAAASTWLP-VNPTALLDLLRDESRRPEW 594


>gi|31339101|dbj|BAC77157.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 813

 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 157/702 (22%), Positives = 255/702 (36%), Gaps = 176/702 (25%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K  
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 84  -QRKEASRLQAVNRKLTAMNKLLMEENDR----------LQKQVS----QLVYENTFFRQ 128
            +R E S L+  N KL + N  + E              +  +VS     L  EN   + 
Sbjct: 163 LERHENSLLKQENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSLEEHHLRVENARLKD 222

Query: 129 QTQNAATLATTDTSCESVVTSGQHHLTPQQQHQ-HPPRDAS-----------PAGLLSIA 176
           +      LA         +      + P Q HQ HP   +S           P+  + I+
Sbjct: 223 ELSRVCALAA------KFLGKSISVMAPPQMHQPHPVPGSSLELAVGGIGSMPSATMPIS 276

Query: 177 EETLTEF---LSKATGTAV-----------------------------EWVQMPGM---- 200
             T+T+F   +S + GT +                             E V+M  M    
Sbjct: 277 --TITDFAGAMSSSMGTVITPMKSEAEPSAMAGIDKSLFLELAMSAMDELVKMAQMGDPL 334

Query: 201 ---------KPGPDSIGIVAISHG---CTGV--------AARACGLVGLDP-TRVAEILK 239
                     P  +S+      +    C GV        A+R  G+V +D    + E L 
Sbjct: 335 WIPGASVPSSPAKESLNFEEYLNTFPPCIGVKPEGYVSEASRESGIVIIDDGAALVETLM 394

Query: 240 DRPSW-------YRDCRSVEVVNVLPTGSSGTIELLY----------MQLYAPTTLAPAR 282
           D   W            + E ++    GS     LL           +Q+ +P  L P R
Sbjct: 395 DERRWSDMFSCMIAKASTTEEISTGVAGSRNGALLLVSDEHSVMQAELQVLSP--LVPIR 452

Query: 283 DFWLLRYTSVLEDGSLVVCERSLNNT--QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGS 340
           +   LR++  L DG   V + S +      G +   +   +    LPSG +++    G  
Sbjct: 453 EVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDTPNGFV 512

Query: 341 IIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH----LRQISQEVSQPSVTGW 396
            +  V+H + +  SV  + RPL  S   +     +A L+     L  +   ++ P     
Sbjct: 513 KVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALPENDSS 572

Query: 397 GRRPAALRA---LSQRLSRGFNEALNGFTDEGWSM---LESDGIDDVTVHVNSSPSKMMG 450
              P   R+   L++R++  F   ++  +   WS    L  +  +DV V    S  +   
Sbjct: 573 AIHPEGKRSMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGEDVHVMARKSVDE--- 629

Query: 451 VQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVK 508
                    P     V+ + A+ +   V P  L  FL     R+EW     D  S     
Sbjct: 630 ---------PGTPXGVVLSAATSVWMPVMPERLFNFLHNKGLRAEW-----DXLS----N 671

Query: 509 AGPCS--LPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM--PSDIFLL 564
            GP      + +    G  V L  A   + ++   +I  E  A     M++  P DI  +
Sbjct: 672 GGPMQEVTSIAKGQQNGNTVCLLKASPTKDKQNSMLILQETCADASGSMVVYAPVDIPAM 731

Query: 565 QLC-SGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
            L  SG D + V                    ++PSGF I+P
Sbjct: 732 HLVMSGGDSSCVA-------------------LLPSGFAILP 754


>gi|356550528|ref|XP_003543638.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 762

 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 132/651 (20%), Positives = 252/651 (38%), Gaps = 140/651 (21%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-- 84
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 111 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 166

Query: 85  --------RKEASRLQAVNRKL----------------TAMNKLLMEENDRLQKQVSQLV 120
                   + E  +L+  N+ L                T+ + ++  E  +L+ + ++L 
Sbjct: 167 ERHENSLLKSEIEKLKEKNKSLRETINKACCPNCGVPTTSRDGVMPTEEQQLRIENAKLK 226

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRD-------ASPAGLL 173
            E    R      A   +T  SC S             Q      D          + ++
Sbjct: 227 AEVEKLRAALGKYAP-GSTSPSCSS----------GHDQENRSSLDFYTGIFGLDKSRIM 275

Query: 174 SIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGI------VAISHGCTG-------VA 220
            I  + + E +  AT     W++    + G + +         A+ +  +         A
Sbjct: 276 DIVNQAMEELIKMATVGEPLWLR--SFETGREILNYDEYVKEFAVENSSSSGKPKRSIEA 333

Query: 221 ARACGLVGLDPTRVAEILKDRPSWYR--DC--RSVEVVNVLPTGS----SGTIELLYMQL 272
           +R   +V +D   + +   D   W     C       V+V+  G     +G ++L++ +L
Sbjct: 334 SRDTAVVFVDLPSLVQSFLDVNQWKEMFPCLISKAATVDVICNGEGLSRNGAVQLMFAEL 393

Query: 273 YAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLI 332
              T + P R+ + +R+   L      + + S++  ++          V+    PSG +I
Sbjct: 394 QMLTPMVPTREVYFVRFCKQLSAEQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCII 449

Query: 333 RPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLRQISQE 387
                G   +  V+H + +  +V  + R +  S      +  +A L     R +  ++  
Sbjct: 450 EDKSNGHCKVIWVEHSECQKSAVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATN 509

Query: 388 VSQPSVTG----WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNS 443
           V     TG     GR+  ++  L+QR++  F  A+   +   W+ + S   +D+ +    
Sbjct: 510 VPMKDSTGVATLAGRK--SILKLAQRMTWSFCHAIGASSIHAWTKVTSKTGEDIRISSRK 567

Query: 444 S---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSS 498
           +   P + +G+              +LCA  S+ L  V P +L  FLR+   R+EW    
Sbjct: 568 NLNDPGEPLGL--------------ILCAVCSVWLP-VSPNVLFDFLRDENRRTEW---- 608

Query: 499 IDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMP 558
            D  S+        +L     G   G  +            ++ IKL+            
Sbjct: 609 -DIMSSGGTVQSIANLA---KGQDRGNAVA-----------IQTIKLKE----------- 642

Query: 559 SDIFLLQ-LCSGVDENAVG-NCAEL--VFAPIDASFSDDAPIIPSGFRIIP 605
           + +++LQ  C+ + E+ V   C ++  + + +    S +  I+PSGF IIP
Sbjct: 643 NSVWILQDSCTNLYESMVAYACVDITGIQSVMTGCDSSNLAILPSGFSIIP 693


>gi|7267248|emb|CAB81031.1| putative homeotic protein [Arabidopsis thaliana]
          Length = 738

 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 113/506 (22%), Positives = 206/506 (40%), Gaps = 103/506 (20%)

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVN------VLPTGSSGT---- 264
           G    A+R   +V ++   + EIL D   W   C    +V+      VL TG +G     
Sbjct: 297 GLRSEASRQSAVVIMNHINLVEILMDVNQW--SCVFSGIVSRALTLEVLSTGVAGNYNGA 354

Query: 265 IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE 324
           ++++  +   P+ L P R+ + +RY     DGS  V + SL++ +  PS P     +R  
Sbjct: 355 LQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLR--PSTP----ILRTR 408

Query: 325 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQ 383
             PSG LI+    G S +  ++HM+++  SV  + +PL +S      K  +A L R   +
Sbjct: 409 RRPSGCLIQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCER 468

Query: 384 ISQEVSQ------PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           ++  ++         +T    R + L+ L++R+   F   +   T   W+ + + G DDV
Sbjct: 469 LASSMASNIPGDLSVITSPEGRKSMLK-LAERMVMSFCSGVGASTAHAWTTMSTTGSDDV 527

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWA 495
            V    S               P     ++ + A+     V P  +  FLR+   R EW 
Sbjct: 528 RVMTRKSMDD------------PGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRKEW- 574

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE---FLEVIKLENMAHYR 552
               D  S                    G ++  +AH     E    + ++++ +    +
Sbjct: 575 ----DILS-------------------NGGMVQEMAHIANGHEPGNCVSLLRVNSGNSSQ 611

Query: 553 EDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRI 603
            +M++     L + C+    +A G  + +++AP+D             D   ++PSGF I
Sbjct: 612 SNMLI-----LQESCT----DASG--SYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAI 660

Query: 604 IPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQE 663
           +P D        N+  ++ S              SS  CG   S++T+AFQ   +     
Sbjct: 661 LP-DGSVGGGDGNQHQEMVSTT------------SSGSCGG--SLLTVAFQILVDSVPTA 705

Query: 664 NVASMARQYVRGII-ASVQRVALALS 688
            ++  +   V  +I  +V+R+  A+S
Sbjct: 706 KLSLGSVATVNSLIKCTVERIKAAVS 731



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE  + ECP P   +R++L R+     N+EP Q+K WFQN+R + K +
Sbjct: 60  RYHRHTQRQIQELESFFKECPHPDDKQRKELSRDL----NLEPLQVKFWFQNKRTQMKAQ 115

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
            E       N+ L + N  L  EN+R ++ +S     N
Sbjct: 116 SERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 149


>gi|18412734|ref|NP_567274.1| homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Arabidopsis
           thaliana]
 gi|75331628|sp|Q93V99.1|PDF2_ARATH RecName: Full=Homeobox-leucine zipper protein PROTODERMAL FACTOR 2;
           AltName: Full=HD-ZIP protein PDF2; AltName:
           Full=Homeodomain transcription factor PDF2
 gi|15983372|gb|AAL11554.1|AF424560_1 AT4g04890/T1J1_3 [Arabidopsis thaliana]
 gi|14276060|dbj|BAB58961.1| protodermal factor2 [Arabidopsis thaliana]
 gi|17064998|gb|AAL32653.1| Unknown protein [Arabidopsis thaliana]
 gi|23197872|gb|AAN15463.1| Unknown protein [Arabidopsis thaliana]
 gi|332657038|gb|AEE82438.1| homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Arabidopsis
           thaliana]
          Length = 743

 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 113/506 (22%), Positives = 206/506 (40%), Gaps = 103/506 (20%)

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVN------VLPTGSSGT---- 264
           G    A+R   +V ++   + EIL D   W   C    +V+      VL TG +G     
Sbjct: 302 GLRSEASRQSAVVIMNHINLVEILMDVNQW--SCVFSGIVSRALTLEVLSTGVAGNYNGA 359

Query: 265 IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE 324
           ++++  +   P+ L P R+ + +RY     DGS  V + SL++ +  PS P     +R  
Sbjct: 360 LQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLR--PSTP----ILRTR 413

Query: 325 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQ 383
             PSG LI+    G S +  ++HM+++  SV  + +PL +S      K  +A L R   +
Sbjct: 414 RRPSGCLIQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCER 473

Query: 384 ISQEVSQ------PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           ++  ++         +T    R + L+ L++R+   F   +   T   W+ + + G DDV
Sbjct: 474 LASSMASNIPGDLSVITSPEGRKSMLK-LAERMVMSFCSGVGASTAHAWTTMSTTGSDDV 532

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWA 495
            V    S               P     ++ + A+     V P  +  FLR+   R EW 
Sbjct: 533 RVMTRKSMDD------------PGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRKEW- 579

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE---FLEVIKLENMAHYR 552
               D  S                    G ++  +AH     E    + ++++ +    +
Sbjct: 580 ----DILS-------------------NGGMVQEMAHIANGHEPGNCVSLLRVNSGNSSQ 616

Query: 553 EDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRI 603
            +M++     L + C+    +A G  + +++AP+D             D   ++PSGF I
Sbjct: 617 SNMLI-----LQESCT----DASG--SYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAI 665

Query: 604 IPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQE 663
           +P D        N+  ++ S              SS  CG   S++T+AFQ   +     
Sbjct: 666 LP-DGSVGGGDGNQHQEMVSTT------------SSGSCGG--SLLTVAFQILVDSVPTA 710

Query: 664 NVASMARQYVRGII-ASVQRVALALS 688
            ++  +   V  +I  +V+R+  A+S
Sbjct: 711 KLSLGSVATVNSLIKCTVERIKAAVS 736



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE  + ECP P   +R++L R+     N+EP Q+K WFQN+R + K +
Sbjct: 65  RYHRHTQRQIQELESFFKECPHPDDKQRKELSRDL----NLEPLQVKFWFQNKRTQMKAQ 120

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
            E       N+ L + N  L  EN+R ++ +S     N
Sbjct: 121 SERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 154


>gi|345195200|tpg|DAA34965.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 611

 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 129/577 (22%), Positives = 223/577 (38%), Gaps = 105/577 (18%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R+T EQ+  L   Y  C  P +  R+ L  +      +E +Q++ WFQN+R     + +A
Sbjct: 45  RHTLEQIRELRAAYQRCDHPDAPTRRALGAKI----GLEGRQVQYWFQNQR----SQTQA 96

Query: 89  SRLQAVNRKLTAMNKLLMEENDRLQKQV------------------------SQLVYENT 124
             L   NR +   N  LM EN  L+  +                         +LV EN 
Sbjct: 97  KALAQNNRVVQQENAALMAENASLRHAILTGSCLACGGATTAAAPAELPPESRRLVAENA 156

Query: 125 FFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLL-SIAEETLTEF 183
             R +   A  L                              A  A  L   AE  + +F
Sbjct: 157 RLRGEYARATALLNQILLSAPAPPGPAAAAVVVSSSSVARPVADRAARLRGHAEAAMDQF 216

Query: 184 LSKATGTAVEWV------QMPGMKPGPDSIGIVAISHGC-----TGVAARACGLVGLDPT 232
           L  AT     W+      +    + G      + + HG         A+RA G+V    T
Sbjct: 217 LLLATKGEPLWLPTTPDGEALNYQLGYKHKKALPVHHGLCPDEFVMEASRATGVVRASAT 276

Query: 233 RVAEILKDRPSWYRDCRSVEVVNV-------LPTGSSGT-IELLY--MQLYAPTTLAPAR 282
            +   L D   W     SV V +V       +  G  G+ I+L+   +Q+++P  L  + 
Sbjct: 277 YLVATLTDARRWSEMFPSV-VASVTARRDAAISGGVFGSHIQLMNAELQVHSPRLLNRSI 335

Query: 283 DFWLLRYTSVLEDGSLVVCERSLNN-----------------TQNGPSMPQAPHFVRAEM 325
           +F  LRYT  + +G   V + S++                    NG ++  A  +    +
Sbjct: 336 NF--LRYTKRVAEGRWAVMDVSVDGILGPPGSRVADAAAAAAAANGVTLVPA-WYTGCRL 392

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR------ 379
           LPSG L+     G   +  V H + +  +VP + RPL+ S   +     +A+L+      
Sbjct: 393 LPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRSGKALGAHRWLASLQRQCEFL 452

Query: 380 ---HLRQISQ--EVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
              H  Q+S+  + +  +++  G+R   +  L+QR+   F  A++G   +      S  I
Sbjct: 453 AVLHSSQVSRGGDNTAAAISSMGKR--GVLELAQRMVADFYSAVSGPVTQ-----PSSSI 505

Query: 435 DDVTVHVNSSPSKM-MGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR--EHR 491
           D+      +   +    V++       ++++ VL A  ++ L + PP ++ R+LR  + R
Sbjct: 506 DEWYGSAGAGARRTDTAVRMVTSKKAGTVADLVLSASTTVWLPNTPPQLVFRYLRDDQRR 565

Query: 492 SEWADSSIDAYSAAAVKAGP-CSLPVPRAGNFGGQVI 527
            EW     DA+ A++      CS+P    G+  G  +
Sbjct: 566 GEW-----DAFFASSAAVTELCSVPT---GHLNGNAV 594


>gi|224130112|ref|XP_002320755.1| predicted protein [Populus trichocarpa]
 gi|222861528|gb|EEE99070.1| predicted protein [Populus trichocarpa]
          Length = 823

 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 116/518 (22%), Positives = 205/518 (39%), Gaps = 98/518 (18%)

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWY--------RDCRS 250
           GMKP            G    A+R  G+V ++   + E L D   W         R   +
Sbjct: 371 GMKP-----------SGFVSEASRETGMVIINSLALVETLMDSNRWAEMFPCVIARTSTT 419

Query: 251 VEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQN 310
             + N +    +G+++L++ +L   + L P R+   LR+     +G   V + S++  + 
Sbjct: 420 DVIANGMGGTRNGSLQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDTIRE 479

Query: 311 GPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIA 370
             +   +P FV    LPSG +++    G S +  ++H + +     ++ RPL  S     
Sbjct: 480 --TSGASPTFVNCRRLPSGCVVQDMPNGYSKVTWIEHAEYDESQTHQLYRPLISSGMGFG 537

Query: 371 QKTTMAALRHLRQ-----ISQEV---SQPSVTGWGRRPAALRALSQRLSRGFNEALNGFT 422
            +  +A L+   +     +S  V      ++T  GRR  ++  L+QR++  F   +   T
Sbjct: 538 AQRWIATLQRQSECLAILMSSNVPSRDHTAITASGRR--SMLKLAQRMTANFCAGVCAST 595

Query: 423 DEGWSMLESDGID-DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
              W+ L +  +D DV V    S               P     ++ + A+ +   V P 
Sbjct: 596 VHKWNKLNAGNVDEDVRVMTRKSVDD------------PGEPPGIVLSAATSVWLPVSPQ 643

Query: 482 ILLRFLREHR--SEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEF 539
            L  FLR+ R  SEW     D  S      GP             Q +  +A   +H   
Sbjct: 644 RLFDFLRDERLRSEW-----DILS----NGGPM------------QEMAHIAKGQDHGNC 682

Query: 540 LEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------ASFSD 592
           + +++   M   +  M++     L + C     +A G+   +V+AP+D        +  D
Sbjct: 683 VSLLRASAMNANQSSMLI-----LQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGD 731

Query: 593 DA--PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVIT 650
            A   ++PSGF I+P   G   P              GPT N  S     +  S  S++T
Sbjct: 732 SAYVALLPSGFAIVPDGPGSRGPPTTNG---------GPTANNNSNGGGPERVS-GSLLT 781

Query: 651 IAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
           +AFQ          +   + + V  +I+ +VQ++  AL
Sbjct: 782 VAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL 819



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 14/105 (13%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE-C 60
           M  +SG  +D+ D+  +K      +Y R+TP+Q++ LE L+ ECP P   +R +L R  C
Sbjct: 99  MDGASGDDQDAADNPPRKK-----RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLC 153

Query: 61  PILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMN 102
                +E +Q+K WFQNRR + K   +R E S L+  N KL A N
Sbjct: 154 -----LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 193


>gi|212721972|ref|NP_001131245.1| uncharacterized protein LOC100192557 [Zea mays]
 gi|194690982|gb|ACF79575.1| unknown [Zea mays]
          Length = 185

 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 35/52 (67%), Positives = 43/52 (82%)

Query: 668 MARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYR 719
           MARQYVR ++ASVQRVA+A++PSR G    ++  PGSPEAHTLARWI +SYR
Sbjct: 1   MARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYR 52


>gi|125572100|gb|EAZ13615.1| hypothetical protein OsJ_03531 [Oryza sativa Japonica Group]
          Length = 759

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 118/519 (22%), Positives = 188/519 (36%), Gaps = 74/519 (14%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 86
           Y R+T EQ+  +E L+ E P P   +RQQ ++E    S ++ +  K+  ++R  RE  +K
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQAVQERHENSLLKSELEKLQDEHRAMRELAKK 158

Query: 87  EASRLQA----VNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTS 142
            +  L       +    A          RL+ + ++L  E    R     +A        
Sbjct: 159 PSRCLNCGVVATSSDAAAAATAADTREQRLRLEKAKLKAEIERLRGTPGKSAADGIASPP 218

Query: 143 CESVVTSGQHHLTPQQQHQHPP----RDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
           C +   + Q +      H H       D     +L +A   L E +   +     WV+  
Sbjct: 219 CSASAGAMQTNSRSPPLHDHDGGFLRHDDDKPRILELATRALDELVGMCSSGEPVWVR-- 276

Query: 199 GMKPGPDSIG------IVAISHGCTG--------VAARACGLVGLDPTRVAEILKDRPSW 244
           G++ G D +       +    HG +G         A+R CGLV LD   +     D   W
Sbjct: 277 GVETGRDILNYDEYVRLFRRDHGGSGDQMAGWTVEASRECGLVYLDTMHLVHTFMDVDKW 336

Query: 245 -------YRDCRSVEVV-NVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDG 296
                       ++E++ N    G  G ++L+Y +L   T + P R+ +  RY   L   
Sbjct: 337 KDLFPTMISKAATLEMISNREDDGRDGVLQLMYAELQTLTPMVPTRELYFARYCKKLAAE 396

Query: 297 SLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVP 356
              + + S + ++ G     A   VR    PSG LI     G   +  V+H      +V 
Sbjct: 397 RWAIVDVSFDESETG---VHASSAVRCWKNPSGCLIEEQNNGRCKMTWVEHTRCRRCTVA 453

Query: 357 EVLRPLYESSTLIAQKTTMAAL-----RHLRQISQEVSQPSVTG----WGRRPAALRALS 407
            + R +  S      +  +AAL     R +  ++  V     TG     GRR  ++  L+
Sbjct: 454 PLYRAVTASGVAFGARRWVAALQLQCERMVFAVATNVPTRDSTGVSTLAGRR--SVLKLA 511

Query: 408 QRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNA-- 465
            R++        G  D  W                 +P    G          S  NA  
Sbjct: 512 HRMTSSLCRTTGGSCDMAW---------------RRAPKGGSGGGGDDDIWLTSRENAGD 556

Query: 466 --------VLCAKASMLLQDVPPAILLRFLREH--RSEW 494
                   + CA AS  L  V P  LL  LR+   R EW
Sbjct: 557 DPGEPQGLIACAAASTWLP-VNPTALLDLLRDESRRPEW 594


>gi|357480751|ref|XP_003610661.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355511996|gb|AES93619.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 735

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 160/770 (20%), Positives = 281/770 (36%), Gaps = 185/770 (24%)

Query: 30  YTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ----- 84
           +T +Q++ ++  + +CP P+  +R    RE  + + ++P QIK WFQNRR   K      
Sbjct: 40  HTQQQIDEMDTFFKQCPNPNDAQR----RELSLRTGLDPTQIKFWFQNRRTSLKHDNVIF 95

Query: 85  ---------RKEA-SRLQAVNRKLTAMNKLLMEENDRLQKQVS----------------- 117
                    R +A + + A  +     N+LL  EN++L+ ++                  
Sbjct: 96  TVIYIALQWRPDAVANIAATVQTDRDENELLKIENEKLRDELDRYKGAISTTCKVCGSSS 155

Query: 118 ----------QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDA 167
                     QL  EN   R++ +       TD+      ++   H+       H     
Sbjct: 156 NAGEMSHEEQQLRLENALLRKELERFVGETPTDSRANITSSNNSTHVA-----SHSTDFG 210

Query: 168 SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKP----------GPDSIGIVAISHGC- 216
              G    +   + E LS    +    VQ+ G+            G D +  +A ++G  
Sbjct: 211 VAGGNNGASHRMVGEGLSVGGSS----VQIKGLNEKQKIVELAVVGMDELTKLARTYGPP 266

Query: 217 ----------------------TGVAARACGL----------VGLDPTRVAEILKDRPSW 244
                                  G     CGL          V ++   + +IL D   W
Sbjct: 267 LWIPTNYVTEILNGEEYMKYFPRGNGPNTCGLRLEGSKESVVVMINAPDLVDILMDVNQW 326

Query: 245 YRD-CRSVE---VVNVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDG 296
               C  V     + VL TG  G     ++++  +   P+   P R    +RY  +  DG
Sbjct: 327 SNMFCGIVSRAATLEVLSTGVGGNYDGALQVMTAEFQVPSPHVPTRQNHFVRYCKLHPDG 386

Query: 297 SLVVCERSLNN-TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 355
             VV + SL+       S   +    R    PSG LI     G + +  +++++++   V
Sbjct: 387 IWVVADVSLHLLNAASASSSSSSTASRTNRRPSGCLIETLPNGLTKVTWIENVEVDDQVV 446

Query: 356 PEVLRPLYESSTLIAQKTTMAAL---------RHLRQISQEVSQPSVTGWGRRPAALRAL 406
             + +PL  S      K  +A L         R    + +E     +T  G++  ++  L
Sbjct: 447 QNIYKPLVNSGLAFGAKRWVATLHRQSDRLFFRTATNVPRE-HHVRLTPEGKK--SILNL 503

Query: 407 SQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVN--GFPSMSN 464
           ++RL   F+ ++   T   W+ +  +G           P  +M +   Y++        +
Sbjct: 504 AERLVASFSTSIGSSTTHAWTKVPGNG-----------PEVVMVMTKRYIDESSIDKPVS 552

Query: 465 AVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNF 522
            VL A  S  L  VPP  +  FLR+   R  W     D  SA                  
Sbjct: 553 VVLSAATSFWLP-VPPRRVFDFLRDQNTRKHW-----DILSA------------------ 588

Query: 523 GGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQL-CSGVDENAVGNCAEL 581
            G ++  LAH     +    + L  +     +    SD+ +LQ  C+ V  + V      
Sbjct: 589 -GGIVHELAHISNGRDSGNYVSLFRITSENSEQ---SDVVVLQENCTDVTGSYV------ 638

Query: 582 VFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQ 641
           V+AP+          IP+   I+   +G D+   +R   L S   + P G   +G     
Sbjct: 639 VYAPVQ---------IPTMHEIL---NGGDS---SRLTLLPSGFAIFPDGCITNGGPIMN 683

Query: 642 CGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALALSPS 690
            GS  S++T+AFQ   +      +A  +   V  +I  +V+R+  A+ P+
Sbjct: 684 VGSGGSLVTVAFQIIVDSIPHARLALGSITTVNTLIKNTVERIRTAVMPN 733


>gi|356505007|ref|XP_003521284.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 835

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 117/505 (23%), Positives = 205/505 (40%), Gaps = 89/505 (17%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTGS-SGTI 265
           +G    A+R  G+V ++   + E L D   W            + EV++    G+ +G +
Sbjct: 385 NGFVSEASRENGMVIINSLALVETLMDSNRWAEMFPCIIARTSTTEVISSGINGTRNGAL 444

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +L++ +L   + L P R+   LR+     +G   V + S+++ +       AP FV    
Sbjct: 445 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSIDSIRESSG---APTFVNGRR 501

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH----- 380
           LPSG +++    G S +  V+H + E   V ++ RPL  S      +  +A L+      
Sbjct: 502 LPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSSGMGFGAQRWVATLQRQCECL 561

Query: 381 ---LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
              +   +      ++T  GRR  ++  L+QR++  F   +   T   W+ L +    D 
Sbjct: 562 AILMSSAAPSRDHSAITAGGRR--SMVKLAQRMTNNFCAGVCASTVHKWNKLNAAANVDE 619

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWA 495
            V V +  S         V+        VL A  S+ L  V P  L  FLR+   RSEW 
Sbjct: 620 DVRVMTRKS---------VDDPGEPPGIVLSAATSVWLP-VSPHRLFDFLRDERLRSEW- 668

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDM 555
               D  S      GP             Q +  +A   +H   + +++   +   +  M
Sbjct: 669 ----DILS----NGGPM------------QEMAHIAKGQDHGNAVSLLRASAINSNQSSM 708

Query: 556 IMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------ASFSDDA--PIIPSGFRIIPL 606
           ++     L + C     +A G+   +V+AP+D        +  D A   ++PSGF I+P 
Sbjct: 709 LI-----LQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPD 757

Query: 607 DSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTK---SVITIAFQFAFEMHLQE 663
             G   P  N           GPT +  +  +    G T+   S++T+AFQ         
Sbjct: 758 GPGSRGPHQN-----------GPTSSTTTTTNGGDNGVTRVSGSLLTVAFQILVNSLPTA 806

Query: 664 NVASMARQYVRGIIA-SVQRVALAL 687
            +   + + V  +I+ +VQ++  AL
Sbjct: 807 KLTVESVETVNNLISCTVQKIKAAL 831



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 27/114 (23%)

Query: 7   GGSRDSRDSGGQKMIMDN----GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE-CP 61
           GGS D  D+       DN     +Y R+TP+Q++ LE L+ ECP P   +R +L R  C 
Sbjct: 118 GGSGDEHDAA------DNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLC- 170

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQ 115
               +E +Q+K WFQNRR + K + E              N LL +END+L+ +
Sbjct: 171 ----LETRQVKFWFQNRRTQMKTQLERHE-----------NTLLRQENDKLRAE 209


>gi|449530931|ref|XP_004172445.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
           sativus]
          Length = 812

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 125/523 (23%), Positives = 209/523 (39%), Gaps = 110/523 (21%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 98  RYHRHTARQIQEMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 153

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQV---------------------SQLVYENT 124
           ++ S     N  L A N+ L  EN RLQ  +                      QL  EN 
Sbjct: 154 QDRSD----NVILRAENETLKNENYRLQSALRNIICPSCGGQGILGEPSLDEQQLRLENA 209

Query: 125 FFRQQTQNAATLATTDTS-----------------------------CESVVTSGQHHLT 155
             R Q +   ++ T  T                               E++V S      
Sbjct: 210 RLRDQLEQVCSMTTRYTGRPIQAMASAAPPLMQPSLDLDMNIYSRQYTEAMVPSSDMMAL 269

Query: 156 PQQQHQHPPRDAS-PAGLLSIAEET-------------------LTEFL---SKATGTAV 192
           P      PP  A  P G L I EE                    LTE L      +G  V
Sbjct: 270 PSML---PPEAAHFPEGGLLIEEEKTLAMDLAVSSIAELVKMCRLTEPLWVRDNESGKEV 326

Query: 193 EWVQMPG-MKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR----- 246
             V+  G M P P ++    I+   T  A R   +V ++   + +   D   W       
Sbjct: 327 LNVEEHGRMFPWPLNLKQHLINEFRTE-ATRDSAVVIMNSITLVDAFLDANKWMELFPSI 385

Query: 247 --DCRSVEVV-NVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLED-GSLVVCE 302
               ++V+V+ + +   +S +++L+Y +L   + L P R+   LR      D GS  V +
Sbjct: 386 VAKAKTVQVISSSVSGHASSSLQLMYAELQTLSPLVPTREAHFLRCCQQNADEGSWTVVD 445

Query: 303 RSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPL 362
             +++  +  S+  +  F R    PSG +I+    G S +  V+H ++E   + ++    
Sbjct: 446 FPIDSFHD--SLQHS--FPRYRRKPSGCIIQDMPNGYSRVTWVEHAEIEEKPIHQIFNHF 501

Query: 363 YESSTLIAQKTTMAAL-RHLRQISQEVSQPSVTGWGRRPA-----ALRALSQRLSRGFNE 416
             S         +A L R   +I+  +++ +++  G  P+      L  L+QR+ R F+ 
Sbjct: 502 VHSGMAFGANRWLAILQRQCERIASLMAR-NISDLGVIPSPEARQNLMKLAQRMIRTFSV 560

Query: 417 ALNGFTDEGWSMLESDGIDD---VTVHVNSSPSKMMGVQLSYV 456
            ++    + W+ L SD  +D   +T      P +  GV LS V
Sbjct: 561 NISTSGGQSWTAL-SDSPEDTVRITTRKVVEPGQPNGVILSAV 602


>gi|30678803|ref|NP_186976.2| homeobox-leucine zipper protein HDG8 [Arabidopsis thaliana]
 gi|187471152|sp|Q9M9P4.2|HDG8_ARATH RecName: Full=Homeobox-leucine zipper protein HDG8; AltName:
           Full=HD-ZIP protein HDG8; AltName: Full=Homeodomain
           GLABRA 2-like protein 8; AltName: Full=Homeodomain
           transcription factor HDG8; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 8
 gi|332640397|gb|AEE73918.1| homeobox-leucine zipper protein HDG8 [Arabidopsis thaliana]
          Length = 699

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 159/727 (21%), Positives = 279/727 (38%), Gaps = 161/727 (22%)

Query: 2   MAVSSGGS--RDSRDSGGQKMIMDNGKYV--RYTPEQVEALERLYHECPKPSSMRRQQLI 57
           M  + GGS   +   SG  K    NGK    R+TP+Q++ LE  + ECP P   +R QL 
Sbjct: 1   MDNNGGGSSGNEQYTSGDAKQ---NGKRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLC 57

Query: 58  RECPILSNIEPKQIKVWFQNRRCREKQRKEASR---LQAVNRKLTAMNKLLM-------- 106
           RE      +EP QIK WFQN+R + K +++ S    L+  N  L + N+ ++        
Sbjct: 58  REL----KLEPDQIKFWFQNKRTQSKTQEDRSTNVLLRGENETLQSDNEAMLDALKSVLC 113

Query: 107 -----------EENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLT 155
                      E    LQK    L +EN   +      +         E  V     ++ 
Sbjct: 114 PACGGPPFGREERGHNLQK----LRFENARLKDHRDRISNFVDQHKPNEPTVEDSLAYVP 169

Query: 156 PQQQHQH---------PPRDASPAGLLSIAEETLTE----FLSKATGTAVE--------- 193
              +  +         P     P     I    L E     LS+   +AVE         
Sbjct: 170 SLDRISYGINGGNMYEPSSSYGPPNFQIIQPRPLAETDMSLLSEIAASAVEELKRLFLAE 229

Query: 194 ---WVQMPGMKPGPDSIGIV----------AISHGCTGVA----ARACGLVGLDPTRVAE 236
              WV     K   D   ++          A+ H  +  A    ++A  +V ++   + +
Sbjct: 230 EQFWV-----KSCIDETYVIDTESYERFSHAVKHFSSTTAHVESSKAVTVVHVEAINLIQ 284

Query: 237 ILKDRPSWYR----DCRSVEVVNVLPTG-----SSGTIELLYMQLYAPTTLAPARDFWLL 287
           +  D   W             ++VL +G     +   +++++ QL+  + L PAR+F ++
Sbjct: 285 MFLDPEKWKELFPTIVNKANTIHVLGSGLPIRGNCNVLQVMWEQLHILSPLVPAREFMVV 344

Query: 288 RYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDH 347
           R    +E G  ++ + S    +       A  + R    PSG LI+      S +  ++H
Sbjct: 345 RCCQEIEKGIWIIADVS---HRANFDFGNAACYKR----PSGCLIQALPDAHSKVMWIEH 397

Query: 348 MDLE-PWSVPEVLRPL------YESSTLIAQKTTMAALRHLRQIS----QEVSQPSVTGW 396
           ++++      ++ R L      Y +   I     M     L  I      + S+   TG 
Sbjct: 398 VEVDHKLDTHKIYRDLLSGGSGYGAKRWIVTLERMCERMALSSIQTLPPSDRSEVITTGE 457

Query: 397 GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYV 456
            RR  ++  L +R+ + FNE L       +     +G+  V++ +N    +  G+     
Sbjct: 458 ARR--SVMKLGERMVKNFNEMLTMSGKIDFPQQSKNGV-RVSIRMNIEAGQPPGI----- 509

Query: 457 NGFPSMSNAVLCAKASMLLQDVPPAILLRFLR--EHRSEWADSSIDAYSAAAVKAGPCSL 514
                    V+ A +S+ +  + P  +  FL+  + R +W     D  S   V     + 
Sbjct: 510 ---------VVSASSSLAIP-LTPLQVFAFLQNLDTRQQW-----DILSYGTV-VNEIAR 553

Query: 515 PVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENA 574
            V  +       IL +  T  HEE  + + +++    ++DM+M  D ++         +A
Sbjct: 554 IVTGSSETNCVTILRVHPT--HEENNDKMVVQDSC--KDDMLMLQDCYM---------DA 600

Query: 575 VGNCAELVFAPIDASFSDDA----------PIIPSGFRIIPLDSGKDTPSPNRTLDLASA 624
           +G    +V+AP+D +    A          PI+PSGF +I  D  + T     TL L  A
Sbjct: 601 LG--GMIVYAPMDMATMHFAVSGEVDPSHIPILPSGF-VISSDGRRSTVEDGGTL-LTVA 656

Query: 625 LEVGPTG 631
            ++  +G
Sbjct: 657 FQILVSG 663


>gi|218195394|gb|EEC77821.1| hypothetical protein OsI_17027 [Oryza sativa Indica Group]
          Length = 849

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 22/129 (17%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K +
Sbjct: 123 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 178

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
            E              N LL +END+L+        EN   R+ T NA  +     +   
Sbjct: 179 LERHE-----------NSLLKQENDKLRS-------ENLSIREATSNAVCVGCGGPAMLG 220

Query: 146 VVTSGQHHL 154
            V+  +HHL
Sbjct: 221 EVSLEEHHL 229


>gi|222629392|gb|EEE61524.1| hypothetical protein OsJ_15826 [Oryza sativa Japonica Group]
          Length = 833

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 22/129 (17%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K +
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
            E              N LL +END+L+        EN   R+ T NA  +     +   
Sbjct: 163 LERHE-----------NSLLKQENDKLRS-------ENLSIREATSNAVCVGCGGPAMLG 204

Query: 146 VVTSGQHHL 154
            V+  +HHL
Sbjct: 205 EVSLEEHHL 213


>gi|116310008|emb|CAH67034.1| OSIGBa0139P06.7 [Oryza sativa Indica Group]
          Length = 805

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 22/129 (17%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K +
Sbjct: 106 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 161

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
            E              N LL +END+L+        EN   R+ T NA  +     +   
Sbjct: 162 LERHE-----------NSLLKQENDKLRS-------ENLSIREATSNAVCVGCGGPAMLG 203

Query: 146 VVTSGQHHL 154
            V+  +HHL
Sbjct: 204 EVSLEEHHL 212



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 96/430 (22%), Positives = 160/430 (37%), Gaps = 70/430 (16%)

Query: 204 PDSIGIVAISHGCTGVAARACGLVGLDP-TRVAEILKDRPSW-------YRDCRSVEVVN 255
           P  IG+     G    A+R  G+V +D    + E L D   W            + E ++
Sbjct: 359 PPCIGVKP--EGYVSEASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEIS 416

Query: 256 VLPTGS-SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT--QNGP 312
               GS +G + L+  +L   + L P R+   LR++  L DG   V + S +      G 
Sbjct: 417 TGVAGSRNGALLLMQAELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGI 476

Query: 313 SMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQK 372
           +   +   +    LPSG +++    G   +  V+H + +  SV  + RPL  S   +   
Sbjct: 477 TSASSTANMNCRRLPSGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAG 536

Query: 373 TTMAALRH----LRQISQEVSQPSVTGWGRRPAALRA---LSQRLSRGFNEALNGFTDEG 425
             +A L+     L  +   ++ P        P   R+   L++R++  F   ++  +   
Sbjct: 537 RWIATLQRQCECLALLMSSIALPENDSSAIHPEGKRSMLKLARRMTDNFCAGVSTSSTRE 596

Query: 426 WSM---LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAI 482
           WS    L  +  +DV V    S  +            P     V+ + A+ +   V P  
Sbjct: 597 WSKLVGLTGNIGEDVHVMARKSVDE------------PGTPPGVVLSAATSVWMPVMPER 644

Query: 483 LLRFLREH--RSEWADSSIDAYSAAAVKAGPCS--LPVPRAGNFGGQVILPLAHTIEHEE 538
           L  FL     R+EW     D  S      GP      + +    G  V L  A   + ++
Sbjct: 645 LFNFLHNKGLRAEW-----DILS----NGGPMQEVTSIAKGQQNGNTVCLLKASPTKDKQ 695

Query: 539 FLEVIKLENMAHYREDMIM--PSDIFLLQLC-SGVDENAVGNCAELVFAPIDASFSDDAP 595
              +I  E  A     M++  P DI  + L  SG D + V                    
Sbjct: 696 NSMLILQETCADASGSMVVYAPVDIPAMHLVMSGGDSSCVA------------------- 736

Query: 596 IIPSGFRIIP 605
           ++PSGF I+P
Sbjct: 737 LLPSGFAILP 746


>gi|115459990|ref|NP_001053595.1| Os04g0569100 [Oryza sativa Japonica Group]
 gi|38344373|emb|CAD41424.2| OSJNBb0032E06.7 [Oryza sativa Japonica Group]
 gi|113565166|dbj|BAF15509.1| Os04g0569100 [Oryza sativa Japonica Group]
          Length = 806

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 22/129 (17%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K +
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
            E              N LL +END+L+        EN   R+ T NA  +     +   
Sbjct: 163 LERHE-----------NSLLKQENDKLRS-------ENLSIREATSNAVCVGCGGPAMLG 204

Query: 146 VVTSGQHHL 154
            V+  +HHL
Sbjct: 205 EVSLEEHHL 213



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 96/430 (22%), Positives = 160/430 (37%), Gaps = 70/430 (16%)

Query: 204 PDSIGIVAISHGCTGVAARACGLVGLDP-TRVAEILKDRPSW-------YRDCRSVEVVN 255
           P  IG+     G    A+R  G+V +D    + E L D   W            + E ++
Sbjct: 360 PPCIGVKP--EGYVSEASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEIS 417

Query: 256 VLPTGS-SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT--QNGP 312
               GS +G + L+  +L   + L P R+   LR++  L DG   V + S +      G 
Sbjct: 418 TGVAGSRNGALLLMQAELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGI 477

Query: 313 SMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQK 372
           +   +   +    LPSG +++    G   +  V+H + +  SV  + RPL  S   +   
Sbjct: 478 TSASSTANMNCRRLPSGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAG 537

Query: 373 TTMAALRH----LRQISQEVSQPSVTGWGRRPAALRA---LSQRLSRGFNEALNGFTDEG 425
             +A L+     L  +   ++ P        P   R+   L++R++  F   ++  +   
Sbjct: 538 RWIATLQRQCECLALLMSSIALPENDSSAIHPEGKRSMLKLARRMTDNFCAGVSTSSTRE 597

Query: 426 WSM---LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAI 482
           WS    L  +  +DV V    S  +            P     V+ + A+ +   V P  
Sbjct: 598 WSKLVGLTGNIGEDVHVMARKSVDE------------PGTPPGVVLSAATSVWMPVMPER 645

Query: 483 LLRFLREH--RSEWADSSIDAYSAAAVKAGPCS--LPVPRAGNFGGQVILPLAHTIEHEE 538
           L  FL     R+EW     D  S      GP      + +    G  V L  A   + ++
Sbjct: 646 LFNFLHNKGLRAEW-----DILS----NGGPMQEVTSIAKGQQNGNTVCLLKASPTKDKQ 696

Query: 539 FLEVIKLENMAHYREDMIM--PSDIFLLQLC-SGVDENAVGNCAELVFAPIDASFSDDAP 595
              +I  E  A     M++  P DI  + L  SG D + V                    
Sbjct: 697 NSMLILQETCADASGSMVVYAPVDIPAMHLVMSGGDSSCVA------------------- 737

Query: 596 IIPSGFRIIP 605
           ++PSGF I+P
Sbjct: 738 LLPSGFAILP 747


>gi|187611423|sp|Q7Y0V9.2|ROC4_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC4; AltName:
           Full=GLABRA 2-like homeobox protein 4; AltName:
           Full=HD-ZIP protein ROC4; AltName: Full=Homeodomain
           transcription factor ROC4; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 4
          Length = 813

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 22/129 (17%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K +
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
            E              N LL +END+L+        EN   R+ T NA  +     +   
Sbjct: 163 LERHE-----------NSLLKQENDKLRS-------ENLSIREATSNAVCVGCGGPAMLG 204

Query: 146 VVTSGQHHL 154
            V+  +HHL
Sbjct: 205 EVSLEEHHL 213



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 97/439 (22%), Positives = 159/439 (36%), Gaps = 81/439 (18%)

Query: 204 PDSIGIVAISHGCTGVAARACGLVGLDP-TRVAEILKDRPSW-------YRDCRSVEVVN 255
           P  IG+     G    A+R  G+V +D    + E L D   W            + E ++
Sbjct: 360 PPCIGVKP--EGYVSEASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEIS 417

Query: 256 VLPTGSSGTIELLY----------MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSL 305
               GS     LL           +Q+ +P  L P R+   LR++  L DG   V + S 
Sbjct: 418 TGVAGSRNGALLLVSDEHSVMQAELQVLSP--LVPIREVKFLRFSKQLADGVWAVVDVSA 475

Query: 306 NNT--QNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 363
           +      G +   +   +    LPSG +++    G   +  V+H + +  SV  + RPL 
Sbjct: 476 DELMRDQGITSASSTANMNCRRLPSGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLL 535

Query: 364 ESSTLIAQKTTMAALRH----LRQISQEVSQPSVTGWGRRPAALRA---LSQRLSRGFNE 416
            S   +     +A L+     L  +   ++ P        P   R+   L++R++  F  
Sbjct: 536 RSGLALGAGRWIATLQRQCECLALLMSSIALPENDSSAIHPEGKRSMLKLARRMTDNFCA 595

Query: 417 ALNGFTDEGWSM---LESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASM 473
            ++  +   WS    L  +  +DV V    S  +            P     V+ + A+ 
Sbjct: 596 GVSTSSTREWSKLVGLTGNIGEDVHVMARKSVDE------------PGTPPGVVLSAATS 643

Query: 474 LLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCS--LPVPRAGNFGGQVILP 529
           +   V P  L  FL     R+EW     D  S      GP      + +    G  V L 
Sbjct: 644 VWMPVMPERLFNFLHNKGLRAEW-----DILS----NGGPMQEVTSIAKGQQNGNTVCLL 694

Query: 530 LAHTIEHEEFLEVIKLENMAHYREDMIM--PSDIFLLQLC-SGVDENAVGNCAELVFAPI 586
            A   + ++   +I  E  A     M++  P DI  + L  SG D + V           
Sbjct: 695 KASPTKDKQNSMLILQETCADASGSMVVYAPVDIPAMHLVMSGGDSSCVA---------- 744

Query: 587 DASFSDDAPIIPSGFRIIP 605
                    ++PSGF I+P
Sbjct: 745 ---------LLPSGFAILP 754


>gi|356529444|ref|XP_003533302.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 896

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 135/302 (44%), Gaps = 50/302 (16%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTGS-SGTIELLYMQ 271
           A+R  G+V ++   + ++  D   W           R++EV++    GS SG+++L+Y +
Sbjct: 453 ASRDSGVVIMNGLTLVDMFMDPNKWMELFPTIVTMARTIEVISSGMMGSHSGSLQLMYEE 512

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   + L   R+F+ LRY   +E G   + + S +  Q+    PQ     R+  LPSG  
Sbjct: 513 LQVLSPLVSTREFYFLRYCQQIEQGLWAIVDVSYDFPQDNQFAPQ----YRSHRLPSGVF 568

Query: 332 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPL-YESSTLIAQKTTMAALRHLRQISQEVS 389
           I+    G S +  ++H+++E  + V  + R L Y      AQ+     L  L+++ + ++
Sbjct: 569 IQDMPNGYSKVTWIEHVEIEDKTPVHRLYRNLIYSGIAFGAQR----WLTTLQRMCERIA 624

Query: 390 QPSVTGWGRR--------PAALRA---LSQRLSRGFNEALNGFTDEGWSMLESDGIDD-- 436
              VTG   R        P   R+   L+QR+   F  +++      W+ L   G+++  
Sbjct: 625 CLMVTGNSTRDLGGVIPSPEGKRSMMKLAQRMVTNFCASISASAGHRWTTLSGSGMNEIG 684

Query: 437 --VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RS 492
             VTVH +S P +  GV LS                A+ +   +PP  +  F ++   R 
Sbjct: 685 VRVTVHKSSDPGQPNGVVLS---------------AATTIWLPIPPQTVFNFFKDEKKRP 729

Query: 493 EW 494
           +W
Sbjct: 730 QW 731



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 201 RYHRHTANQIQRLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 256

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R +   L+A N K+   N  + E
Sbjct: 257 HERADNCALRAENDKIRCENIAIRE 281


>gi|356517624|ref|XP_003527487.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 729

 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 146/345 (42%), Gaps = 48/345 (13%)

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
           L+ +A+     +L+   GT+    +   ++  P  IG       C   A+R   +V ++ 
Sbjct: 255 LIGMAQMGEPLWLTTLDGTSTMLNEDEYIRSFPRGIGPKPSGFKCE--ASRETAVVIMNH 312

Query: 232 TRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----IELLYMQLYAPTTLAPARD 283
             + EIL D   W      +      + VL TG +G     ++++  +L  PT L P R+
Sbjct: 313 VNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQLPTPLVPTRE 372

Query: 284 FWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIH 343
            + +RY     DG+  V + SL+N +  PS        R    PSG LI+    G S + 
Sbjct: 373 SYFVRYCKQHGDGTWAVVDVSLDNLRPSPS-------ARCRRRPSGCLIQEMPNGYSKVT 425

Query: 344 IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQ--PSV------T 394
            V+H++++   V  + + L  S      K  +A L R   +++  ++   P+V       
Sbjct: 426 WVEHVEVDDRGVHNLYKQLVSSGHAFGAKRLVATLDRQCERLASAMATNIPTVDVGVITN 485

Query: 395 GWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGV 451
             GR+  ++  L++R+   F   ++  T   W+ L   G DDV V    S   P +  G+
Sbjct: 486 QEGRK--SMMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGI 543

Query: 452 QLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
                         VL A  S  L  VPP  +  FLR+   R+EW
Sbjct: 544 --------------VLSAATSFWLP-VPPKRVFDFLRDENSRNEW 573



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 57  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 112

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E + L+  N KL A N
Sbjct: 113 HERHENTNLRTENEKLRADN 132


>gi|225464265|ref|XP_002271012.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Vitis
           vinifera]
          Length = 715

 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 132/300 (44%), Gaps = 48/300 (16%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNV-LPTGSSGTIELLYMQ 271
           A+R  G+V ++   + +I  D   W           R++EV++  +  G SG+++L+Y +
Sbjct: 281 ASRDSGVVIMNSLALVDIFMDSNKWMELFPTIVSMARTLEVLSSGMMGGQSGSLQLMYGE 340

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   ++L P R+F+ LRY   +E GS  + + S +  ++    PQ P    +  LPSG L
Sbjct: 341 LQVLSSLVPTREFYFLRYCQQIEQGSWAIVDVSYDFPRDNQFAPQNP----SHRLPSGCL 396

Query: 332 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTLIAQKTTMAALRHL--------- 381
           I+    G S +  V+H+++E  +    + R L         +  +A L+ +         
Sbjct: 397 IQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGLAFGAERWLATLQRMCERFACLMV 456

Query: 382 -----RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
                R +   +  P     G+R  ++  L+QR+   F  +++      W+ L   G+++
Sbjct: 457 KGTSTRDLGGVIPSPD----GKR--SMMKLAQRMVNNFCASISTSNGHRWTTLS--GLNE 508

Query: 437 VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRS--EW 494
           V V V             + N  P   N V+ + A+ +   V P  +  F R+ R+  +W
Sbjct: 509 VGVRVT-----------IHKNTDPGQPNGVVLSAATTIWLPVSPQNVFNFFRDERTRPQW 557



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 17/113 (15%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 29  RYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELA----LAPRQIKFWFQNRRTQMKAQ 84

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY---------ENTFFRQQ 129
            E    +A N  L   N  +  EN  +++ +  ++          E+++F +Q
Sbjct: 85  HE----RADNCALRVENDKIRCENIAIREALKNVICPSCGGPPIGEDSYFDEQ 133


>gi|296088020|emb|CBI35303.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 132/294 (44%), Gaps = 36/294 (12%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNV-LPTGSSGTIELLYMQ 271
           A+R  G+V ++   + +I  D   W           R++EV++  +  G SG+++L+Y +
Sbjct: 281 ASRDSGVVIMNSLALVDIFMDSNKWMELFPTIVSMARTLEVLSSGMMGGQSGSLQLMYGE 340

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   ++L P R+F+ LRY   +E GS  + + S +  ++    PQ P    +  LPSG L
Sbjct: 341 LQVLSSLVPTREFYFLRYCQQIEQGSWAIVDVSYDFPRDNQFAPQNP----SHRLPSGCL 396

Query: 332 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTLIAQKTTMAALRHLRQ-----IS 385
           I+    G S +  V+H+++E  +    + R L         +  +A L+ + +     + 
Sbjct: 397 IQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGLAFGAERWLATLQRMCERFACLMV 456

Query: 386 QEVSQPSVTGWGRRPAALRA---LSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN 442
           +  S   + G    P   R+   L+QR+   F  +++      W+ L   G+++V V V 
Sbjct: 457 KGTSTRDLGGVIPSPDGKRSMMKLAQRMVNNFCASISTSNGHRWTTLS--GLNEVGVRVT 514

Query: 443 SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRS--EW 494
                       + N  P   N V+ + A+ +   V P  +  F R+ R+  +W
Sbjct: 515 -----------IHKNTDPGQPNGVVLSAATTIWLPVSPQNVFNFFRDERTRPQW 557



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 17/113 (15%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 29  RYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELA----LAPRQIKFWFQNRRTQMKAQ 84

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY---------ENTFFRQQ 129
            E    +A N  L   N  +  EN  +++ +  ++          E+++F +Q
Sbjct: 85  HE----RADNCALRVENDKIRCENIAIREALKNVICPSCGGPPIGEDSYFDEQ 133


>gi|30684155|ref|NP_193506.2| homeobox-leucine zipper protein HDG4 [Arabidopsis thaliana]
 gi|75329764|sp|Q8L7H4.1|HDG4_ARATH RecName: Full=Homeobox-leucine zipper protein HDG4; AltName:
           Full=HD-ZIP protein HDG4; AltName: Full=Homeodomain
           GLABRA 2-like protein 4; AltName: Full=Homeodomain
           transcription factor HDG4; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 4
 gi|22136630|gb|AAM91634.1| putative GLABRA2 protein [Arabidopsis thaliana]
 gi|332658537|gb|AEE83937.1| homeobox-leucine zipper protein HDG4 [Arabidopsis thaliana]
          Length = 709

 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 95/424 (22%), Positives = 176/424 (41%), Gaps = 51/424 (12%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E L+ E   P +  R +L ++      + P Q+K WFQN+R + K +
Sbjct: 91  RYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKL----GLSPIQVKFWFQNKRTQIKAQ 146

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +  S     N KL A N+ L  E+  +Q     L         + +NA      D    S
Sbjct: 147 QSRSD----NAKLKAENETLKTESQNIQSNFQCLFCSTCGHNLRLENARLRQELD-RLRS 201

Query: 146 VVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGM----- 200
           +V+    + +P Q+   P  + +    + IAEE     +  A   A E  +M  +     
Sbjct: 202 IVS--MRNPSPSQEIT-PETNKNNNDNMLIAEEEKAIDMELAVSCARELAKMCDINEPLW 258

Query: 201 -KPGPDSIGIVAISHGCTGV---------------AARACGLVGLDPTRVAEILKDRPSW 244
            K   D+  +         +               A+RA  ++ L+   + +   D   W
Sbjct: 259 NKKRLDNESVCLNEEEYKKMFLWPLMNDDDRFRREASRANAVIMLNCITLVKAFLDADKW 318

Query: 245 YR-------DCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSV-LEDG 296
                      ++ ++++   +G SGT+ L++ +L   + L P R+ + LRY     E+G
Sbjct: 319 SEMFFPIVSSAKTAQIISSGASGPSGTLLLMFAELQVVSPLVPTREAYFLRYVEQNAEEG 378

Query: 297 SLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV- 355
             +V +  ++  +   S      + R    PSG +I+    G S +  V+H+++E   V 
Sbjct: 379 KWMVVDFPIDRIKPA-SATTTDQYRRK---PSGCIIQAMRNGYSQVTWVEHVEVEEKHVQ 434

Query: 356 PEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAA-----LRALSQRL 410
            EV+R   ES      +  ++ L+   +    +   ++T  G  P+      L  LSQR+
Sbjct: 435 DEVVREFVESGVAFGAERWLSVLKRQCERMASLMATNITDLGVIPSVEARKNLMKLSQRM 494

Query: 411 SRGF 414
            + F
Sbjct: 495 VKTF 498


>gi|8920421|emb|CAB96422.1| OCL2 protein [Zea mays]
          Length = 725

 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 174/766 (22%), Positives = 283/766 (36%), Gaps = 207/766 (27%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S    D GG K       Y R+ P Q+E LE ++ E   P   +R QL R+      +
Sbjct: 12  GMSFGDLDGGGSK---RKKPYNRHAPRQIEQLEAMFKEFHHPDEKQRAQLSRQL----GL 64

Query: 67  EPKQIKVWFQNRR------------CREKQRKEASRLQ-------------------AVN 95
           +P+Q+K WFQNRR             R KQ  +  R++                   AV 
Sbjct: 65  DPRQVKFWFQNRRTHLKNQLERQENARLKQENDKLRVENLSIREAIRDLVCSCCGGPAVL 124

Query: 96  RKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLA-------TTDTSCESVVT 148
            +L+     L  EN RL+ +++++    + F  +  +   L         T +S E  V 
Sbjct: 125 GELSPEEHQLRLENARLRDELARVCTVTSKFIGKPMSHMELLLAKEPHPITGSSLELAVA 184

Query: 149 SGQHHLTPQQQ------------------HQHPPRDASPAGLLSIAEETLTEFLSKATGT 190
            G     P  +                      P   +   ++SI  +  ++F   A   
Sbjct: 185 VGVGSGVPSSKMPVSTISELAGSTSSSTGTVTTPMVTASLPMVSIVIDK-SKFAQLAVSA 243

Query: 191 AVEWVQMPGMK--------PGPDSIGIVAISHG--------CTGV--------AARACGL 226
             E V+M  M         P P S  +  ++          C GV        A+R  G+
Sbjct: 244 MNELVKMARMNEPLWIPTIPSPGSPIMETLNFKEYLKAFSPCVGVKPTGFVSEASRESGI 303

Query: 227 VGLDPTR-VAEILKDRPSW----YRDCRSVEVVN-VLP--TGS-SGTIELLYMQLYAPTT 277
           V +D +  + E+  D   W    Y       +V  +LP   GS +G + L+  +L   + 
Sbjct: 304 VTIDSSAALMEVFMDERRWSDIFYCIVAKASIVEEILPGVAGSRNGALLLMQAELQMLSP 363

Query: 278 LAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEG 337
             P R+   LR+   L +G+  V + S++  Q    +       +   LPSG +++    
Sbjct: 364 RVPIREVTFLRFCKQLAEGAWAVVDVSIDGLQTDQCLDTN---TKCRRLPSGCVLQDTPN 420

Query: 338 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH----LRQISQEVSQP-- 391
           G  +   V+H +    SV ++ +PL  S   +     +A L+     L  +   ++ P  
Sbjct: 421 GCKVTW-VEHAEYPEASVHQLYQPLMRSGLALGAGRWLATLQRQCECLAILMSSLAAPEH 479

Query: 392 ---SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI-----DDVTVHVNS 443
              +V+  G+   +L  L++R+   F   +   +   WSML  DG+      DV V V +
Sbjct: 480 DSAAVSLEGK--WSLLKLARRMMENFCAGMGASSSREWSML--DGLTGSTGKDVRVMVQN 535

Query: 444 SPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR--EHRSEWADSSIDA 501
           S  +            P +   V+ + A+ +   V    LL FLR  E R+EW     D 
Sbjct: 536 SVDE------------PGVPPGVVLSVATAVWLPVTTERLLNFLRDEELRAEW-----DI 578

Query: 502 YSAAAVKAGPCS--LPVPRAGNFGGQV-ILPLAHTIEHEEFLEVIKLENMAHYREDMIMP 558
            S      GP    L V +    G  V +L   HT  H                    + 
Sbjct: 579 LS----NGGPMQQVLRVTKGQLDGNSVALLRSDHTDSH--------------------LN 614

Query: 559 SDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIPLDSG 609
           S + L + C+  D +     A +V+AP+D            S +  ++PSGF I+P  S 
Sbjct: 615 SILILQETCT--DRSG----AMVVYAPVDFPAMQLVLGGGDSKNVALLPSGFVILPAGS- 667

Query: 610 KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
                             G  G+KA G          S++T+AFQ 
Sbjct: 668 ----------------SAGGVGHKARG----------SLLTVAFQI 687


>gi|356543720|ref|XP_003540308.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 732

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 117/507 (23%), Positives = 199/507 (39%), Gaps = 94/507 (18%)

Query: 204 PDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPT 259
           P  IG   +   C   A+R   +V ++   + EIL D   W      +      + VL T
Sbjct: 294 PRGIGPKPVGFKCE--ASRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLST 351

Query: 260 GSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 315
           G +G     ++++  ++  P+ L P R+ + +RY     DG+  V + SL+N +  PS  
Sbjct: 352 GVAGNYNGALQVMTAEVQVPSPLVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSPS-- 409

Query: 316 QAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTM 375
                 R    PSG LI+    G S +  V+H++++   V  + + L  S      K  +
Sbjct: 410 -----ARCRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWI 464

Query: 376 AAL-RHLRQISQEVSQ--PSV-----TGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           A L R   +++  ++   P+V     T    R + L+ L++R+   F   ++  T   W+
Sbjct: 465 ANLDRQCERLASAMATNIPTVDVGVITNPDGRKSMLK-LAERMVISFCAGVSASTAHTWT 523

Query: 428 MLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILL 484
            L   G DDV V    S   P +  G+              VL A  S  L  V P  + 
Sbjct: 524 TLSGTGADDVRVMTRKSVDDPGRPPGI--------------VLSAATSFWLP-VSPKRVF 568

Query: 485 RFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEV 542
            FLR+   RSEW     D  S                    G V+  +AH     +    
Sbjct: 569 EFLRDENSRSEW-----DILS-------------------NGGVVQEMAHIANGRDTGNC 604

Query: 543 IKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFR 602
           + L  +          S++ +LQ     +  A    + +++AP+D               
Sbjct: 605 VSLLRVNSANSSQ---SNMLILQ-----ESCADSTGSFVIYAPVD--------------- 641

Query: 603 IIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQ 662
           I+ ++   +   P+    L S   + P G  A G      G   S++T+AFQ   +    
Sbjct: 642 IVAMNVVLNGGDPDYVALLPSGFAILPDGTTAHGGGIGDIGHGGSLLTVAFQILVDSVPT 701

Query: 663 ENVASMARQYVRGIIA-SVQRVALALS 688
             ++  +   V  +IA +V+R+  ALS
Sbjct: 702 AKLSLGSVATVNNLIACTVERIKAALS 728



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 62  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 117

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R E ++L+  N KL A N    E
Sbjct: 118 HERHENTQLRTENEKLRADNMRFRE 142


>gi|147856728|emb|CAN83483.1| hypothetical protein VITISV_009450 [Vitis vinifera]
          Length = 717

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 48/300 (16%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNV-LPTGSSGTIELLYMQ 271
           A+R  G+V ++   + +I  D   W           R++EV++  +  G SG+++L+Y +
Sbjct: 283 ASRDSGVVIMNSLALVDIFMDSNKWMELFPTIVSMARTLEVLSSGMMGGQSGSLQLMYGE 342

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   + L P R+F+ LRY   +E GS  + + S +  ++    PQ P    +  LPSG L
Sbjct: 343 LQVLSXLVPTREFYFLRYCQQIEQGSWAIVDVSYDFPRDNQFAPQNP----SHRLPSGCL 398

Query: 332 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTLIAQKTTMAALRHL--------- 381
           I+    G S +  V+H+++E  +    + R L         +  +A L+ +         
Sbjct: 399 IQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGLAFGAERWLATLQRMCERFACLMV 458

Query: 382 -----RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
                R +   +  P     G+R  ++  L+QR+   F  +++      W+ L   G+++
Sbjct: 459 KGTSTRDLGGVIPSPD----GKR--SMMKLAQRMVNNFCASISTSNGHRWTTLS--GLNE 510

Query: 437 VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRS--EW 494
           V V V             + N  P   N V+ + A+ +   V P  +  F R+ R+  +W
Sbjct: 511 VGVRVT-----------IHKNTDPGQPNGVVLSAATTIWLPVSPQNVFNFFRDERTRPQW 559



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 17/113 (15%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 31  RYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELA----LAPRQIKFWFQNRRTQMKAQ 86

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY---------ENTFFRQQ 129
            E    +A N  L   N  +  EN  +++ +  ++          E+++F +Q
Sbjct: 87  HE----RADNCALRVENDKIRCENIAIREALKNVICPSCGGPPIGEDSYFDEQ 135


>gi|197116175|dbj|BAG68845.1| homeodomain-containing transcription factor FWA [Turritis glabra]
          Length = 683

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 144/666 (21%), Positives = 251/666 (37%), Gaps = 178/666 (26%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R+T  Q++ LE  Y     P+  +R +L +      N+E KQ+K WFQN+R + K  +E 
Sbjct: 46  RHTAYQIQELENFYEHNSHPTEDQRYELGQRL----NMEAKQVKFWFQNKRTQVKINRER 101

Query: 89  SRLQAV----NRKLTAMNKL---------------------------LMEENDRLQKQV- 116
            + +A+    +R L A +KL                           LM EN+RL++++ 
Sbjct: 102 LQNRALIENHDRMLGAQDKLRCAMLRSSCNICGRATNCGDVDYEVQKLMVENNRLKREID 161

Query: 117 --SQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLL- 173
             S  +Y+ +  R Q   +  L     SC S                +P R+A+P   L 
Sbjct: 162 PYSSFLYDPS--RVQVSPSEPLP----SCSS----------------NPGRNATPQLDLG 199

Query: 174 ---SIAEETLTEFLSKATGTAVEWVQMPGMKPGP--------DSIGIVAISH-------- 214
              + A++ +++FL  A  TA++ + + G    P          + +V   +        
Sbjct: 200 CGSTSAKKEISKFLDLAN-TAMKELIVLGEPDCPFWTIDLRSKEVSLVYEKYRGVFNNII 258

Query: 215 ---GCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVN----VLPTG----SSG 263
              GC   A+R  GLV +  + + + L D   W     S+  V+    V+ TG     SG
Sbjct: 259 KPPGCVVEASRDTGLVPMTSSTLVKTLMDTGKWVNVFASIVPVSSTHKVIRTGYGGVKSG 318

Query: 264 TIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRA 323
           +++ +  +    + L P R    LRY   L+ G  VV + +          P    +  +
Sbjct: 319 SLQQIQAEFQVISPLVPKRQVTFLRYCKELKHGLWVVVDVT------PAEYPTFLSYGAS 372

Query: 324 EMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR---- 379
             LPSG +I     G S +  ++  +     + ++ +PL  S   +  K     L+    
Sbjct: 373 NRLPSGLIIEDIANGYSKVTWIEQAEYNESHIHQLYQPLIGSGIGLGAKRWFKTLQRYCG 432

Query: 380 --------HLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLES 431
                   +L QIS  +S    T        L  L+QR++  +   + G + + W +++ 
Sbjct: 433 SLSTLTSTNLDQISPGLSAKGAT-------ELVKLAQRMTLKYYTGITGSSTDKWEIIQV 485

Query: 432 DGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE-- 489
           + +             M+ +    +N     +  VL A  S+    V    L  FL    
Sbjct: 486 ENV----------AQNMIFMTRKNLNETGEYTGIVLSAATSVWF-PVNQQTLFAFLSHPS 534

Query: 490 HRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMA 549
            R EW                                   L H    EE +   K +   
Sbjct: 535 FRHEWD---------------------------------ILTHNTSMEETIRFQKAKGHG 561

Query: 550 HYREDM-IMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASF---------SDDAPIIPS 599
           +    + I+ + + +LQ    V  +A G  A +V+AP++ S          SD   ++PS
Sbjct: 562 NIISLLRIIRNGMLVLQ---EVWNDASG--AVVVYAPVETSSIEPVKRGENSDSVQLLPS 616

Query: 600 GFRIIP 605
           GF I+P
Sbjct: 617 GFSILP 622


>gi|312282177|dbj|BAJ33954.1| unnamed protein product [Thellungiella halophila]
          Length = 749

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 125/301 (41%), Gaps = 44/301 (14%)

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVN------VLPTGSSGT---- 264
           G    A+R   +V ++   + EIL D   W   C    +V+      VL TG +G     
Sbjct: 304 GLRSEASRESAVVIMNHINLVEILMDVNQW--SCVFSGIVSRALTLEVLSTGVAGNYNGA 361

Query: 265 IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE 324
           ++++  +   P+ L P R+ + +RY     DGS  V + SL++ +  P         R  
Sbjct: 362 LQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPNP-------ISRTR 414

Query: 325 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQ 383
             PSG LI+    G S +  ++HM+++  SV  + +PL  S      K  ++ L R   +
Sbjct: 415 RRPSGCLIQELPNGYSKVTWIEHMEVDDRSVHTMYKPLVHSGLAFGAKRWVSTLERQCER 474

Query: 384 ISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID 435
           ++  ++     G         GR+  ++  L++R+   F   +   T   W+ + S G D
Sbjct: 475 LASSMASNIPAGDLSVITSPEGRK--SMLKLAERMVMSFCSGVGASTAHAWTTMSSTGSD 532

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSE 493
           DV V    S               P     ++ + A+     V P  +  FLR+   RSE
Sbjct: 533 DVRVMTRKSMDD------------PGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSE 580

Query: 494 W 494
           W
Sbjct: 581 W 581



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 8/98 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE  + ECP P   +R++L R+      +EP Q+K WFQN+R + K +
Sbjct: 65  RYHRHTQRQIQELESFFKECPHPDDKQRKELSRDL----GLEPLQVKFWFQNKRTQMKAQ 120

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
            E       N+ L + N  L  EN+R ++ +S     N
Sbjct: 121 HERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 154


>gi|359489358|ref|XP_002272264.2| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Vitis
           vinifera]
          Length = 811

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 204/500 (40%), Gaps = 100/500 (20%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR--DCR--SVEVVNVLPTGSSGT----IELLYMQ 271
           + R  G+V ++   + E L D   W     C        +V+ +G  GT    ++L++ +
Sbjct: 376 STRETGMVIINSLALVETLMDSNRWAEMFPCMIARTSTTDVISSGMGGTRNGALQLMHAE 435

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   + L P R+   LR+     +G   V + S++  +       AP FV    LPSG +
Sbjct: 436 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRE---TSVAPTFVNCRRLPSGCV 492

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-----ISQ 386
           ++    G S +  V+H + +  +V ++ RPL  S      +  +A L+  RQ     I  
Sbjct: 493 VQDMPNGYSKVTWVEHAEYDESAVHQLYRPLLGSGMGFGAQRWVATLQ--RQCECLAILM 550

Query: 387 EVSQPS------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID-DVTV 439
             + P+      +T  GRR  ++  L+QR++  F   +   T   W+ L +  +D DV V
Sbjct: 551 SSTVPTRDHTAAITAGGRR--SMLKLAQRMTDNFCAGVCASTVHKWNKLCAGNVDEDVRV 608

Query: 440 HVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHR--SEWADS 497
               S               P     ++ + A+ +   V P  L  FLR+ R  SEW   
Sbjct: 609 MTRKSVDD------------PGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEW--- 653

Query: 498 SIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM 557
             D  S      GP             Q +  +A   +H   + +++   M   +  M++
Sbjct: 654 --DILS----NGGPM------------QEMAHIAKGQDHGNCVSLLRASAMNANQSSMLI 695

Query: 558 PSDIFLLQLCSGVDENAVGNCAELVFAPID-------ASFSDDA--PIIPSGFRIIPLDS 608
                L + C     +A G+   +V+AP+D        +  D A   ++PSGF I+P   
Sbjct: 696 -----LQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP--D 742

Query: 609 GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASM 668
           G  +  PN  +   S    GP  N+ SG          S++T+AFQ          +   
Sbjct: 743 GPGSRGPNSGVHTNSG---GP--NRVSG----------SLLTVAFQILVNSLPTAKLTVE 787

Query: 669 ARQYVRGIIA-SVQRVALAL 687
           + + V  +I+ +VQ++  AL
Sbjct: 788 SVETVNNLISCTVQKIKAAL 807



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 12/104 (11%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M  +SG  +D+ D+  +K      +Y R+TP+Q++ LE L+ ECP P   +R +L R   
Sbjct: 96  MDGASGDDQDAADNPPRKK-----RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRL- 149

Query: 62  ILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMN 102
              ++E +Q+K WFQNRR + K   +R E S L+  N KL A N
Sbjct: 150 ---SLETRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRAEN 190


>gi|109729928|tpg|DAA05778.1| TPA_inf: class IV HD-Zip protein HDZ44 [Physcomitrella patens]
          Length = 809

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 135/321 (42%), Gaps = 60/321 (18%)

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR--DC---RSVEV 253
           GMKP            G    A+R   LV ++   + E L D   W     C   R+V  
Sbjct: 360 GMKPA-----------GLRTEASRETALVMMNGVNLVETLLDASQWAEMFPCVVSRAV-T 407

Query: 254 VNVLPTG----SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQ 309
           V VL TG     +G ++L+Y +L   + L P R+ + LRY     +G   V + S+ + +
Sbjct: 408 VEVLSTGVAGNRNGALQLMYAELQVLSPLVPTREVYFLRYCKQHAEGVWGVVDVSVESLR 467

Query: 310 NGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLI 369
           + P     P  +R    PSG LI+    G + +  V+H + +  +V  + + L  S    
Sbjct: 468 DNPP----PSLMRCRRRPSGVLIQDTPNGYARVTCVEHAEYDDRAVHRMYKELVGSGMAF 523

Query: 370 AQKTTMAAL-RHLRQISQEVSQ----------PSVTGWGRRPAALRALSQRLSRGFNEAL 418
             +  +A L R   +++  ++           PS +  GRR  ++  L+QR++  F   +
Sbjct: 524 GAQRWVATLERQCERVASLLASNIAPRDLGGVPSAS--GRR--SMLKLAQRMTSNFCAGV 579

Query: 419 NGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLL 475
           +  T   W+ L   G DDV V    S   P +  G+              VL A  SM L
Sbjct: 580 SASTAHTWTTLSGSGDDDVRVMTRKSVDNPGEPQGI--------------VLSAATSMWL 625

Query: 476 QDVPPAILLRFLREH--RSEW 494
             V  A +  FLR+   RSEW
Sbjct: 626 A-VSAARVFEFLRDERLRSEW 645



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 44/202 (21%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           GGS D +D+          +Y R+TP Q++ +E ++ ECP P   +RQQL ++      +
Sbjct: 102 GGSDDDQDADHPPR---KKRYHRHTPRQIQEMEMIFKECPHPDDKQRQQLSKDL----GL 154

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF 126
            P+Q+K WFQNRR + K + E            A N LL  EN++++        EN   
Sbjct: 155 APRQVKFWFQNRRTQMKAQTE-----------RAENSLLRAENEKVRA-------ENVIM 196

Query: 127 RQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSK 186
           R+     A   T    C    T G+  L  QQ              L +    L E L +
Sbjct: 197 RE-----ALRKTQCPHCSVPATVGEMSLDEQQ--------------LRVENVRLKEELDR 237

Query: 187 ATGTAVEWVQMPGMKPGPDSIG 208
            +  A +++  P    GP  +G
Sbjct: 238 VSALAAKYLGRPIAGMGPVGVG 259


>gi|356550018|ref|XP_003543387.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 781

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 113/491 (23%), Positives = 194/491 (39%), Gaps = 92/491 (18%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----IELLYMQ 271
           A+R   +V ++   + EIL D   W      +      + VL TG +G     ++++  +
Sbjct: 357 ASRETAVVIMNHVNLVEILMDVNQWSTVFAGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 416

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           +  P+ L P R+ + +RY     DG+  V + SL+N +  PS        R    PSG L
Sbjct: 417 VQVPSPLVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSPS-------ARCRRRPSGCL 469

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQ 390
           I+    G S +  V+H++++   V  + + L  S      K  +A L R   +++  ++ 
Sbjct: 470 IQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMAT 529

Query: 391 --PSV-----TGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNS 443
             P+V     T    R + L+ L++R+   F   ++  T   W+ L   G DDV V    
Sbjct: 530 NIPTVDVGVITNQDGRKSMLK-LAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRK 588

Query: 444 S---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSS 498
           S   P +  G+              VL A  S  L  V P  +  FLR+   RSEW    
Sbjct: 589 SVDDPGRPPGI--------------VLSAATSFWLP-VSPKRVFEFLRDENSRSEW---- 629

Query: 499 IDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMP 558
            D  S                    G V+  +AH     +    + L  +          
Sbjct: 630 -DILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQ--- 666

Query: 559 SDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRT 618
           S++ +LQ     +  A    + +++AP+D               I+ ++   +   P+  
Sbjct: 667 SNMLILQ-----ESCADSTGSFVIYAPVD---------------IVAMNVVLNGGDPDYV 706

Query: 619 LDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA 678
             L S   + P G  A G      G   S++T+AFQ   +      ++  +   V  +IA
Sbjct: 707 ALLPSGFAILPDGTTAHGGGIGDTGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIA 766

Query: 679 -SVQRVALALS 688
            +V+R+  ALS
Sbjct: 767 CTVERIKAALS 777



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 111 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 166

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R E ++L+  N KL A N    E
Sbjct: 167 HERHENTQLRTENEKLRADNMRFRE 191


>gi|109729914|tpg|DAA05771.1| TPA_inf: class IV HD-Zip protein HDZ41 [Selaginella moellendorffii]
          Length = 815

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 126/554 (22%), Positives = 207/554 (37%), Gaps = 123/554 (22%)

Query: 180 LTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILK 239
           L E  +K +    E++Q      GP  +G+ A          R  GLV ++   + + + 
Sbjct: 337 LEENGAKESLNGEEYMQQFSRGLGPTPVGLKA-------EVTRDTGLVMMNGAALVDTIM 389

Query: 240 DRPSWYRDCRSVEVV-----NVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYT 290
           D   W  D  S  +       VL TG  G     ++L+Y +    + L P R+ + LRY 
Sbjct: 390 DAGRWM-DMFSCIISRALTSEVLSTGVGGNWNNALQLMYAEFQVLSPLVPTREAYFLRYC 448

Query: 291 SVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDL 350
               +G   + + S++  +  P     P  +R  + PSG+LI+    G S + I+ HM+ 
Sbjct: 449 KQHAEGVWAIVDVSVDGLRENP-----PPQLRNRLRPSGFLIQDMPNGYSKVTILQHMEY 503

Query: 351 EPWSVPEVLRPLYESSTLIAQKTTMAALRHL--------------RQISQEVSQPS---- 392
           +   V  + R L  S      K  +A L+                R +      P+    
Sbjct: 504 DDRQVNNMYRGLVSSGLAFGAKRWLATLQRQCERLAVLLATNISPRDLGVSSYGPADQSL 563

Query: 393 ------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPS 446
                     GRR  ++  L+QR++  F   ++  T   W+ L   G DDV V    S  
Sbjct: 564 LFFAVISNATGRR--SMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVMTRKSID 621

Query: 447 KMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSA 504
                        P     ++ + A+ L   V P  +  FLR+   RSEW     D  S 
Sbjct: 622 N------------PGEPPGIVLSAATSLWMPVSPQRVFEFLRDDRLRSEW-----DILS- 663

Query: 505 AAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLL 564
                              G  +  +AH  +  +   VI L  +          S++ +L
Sbjct: 664 ------------------NGGSVQEMAHIAKGHDPGNVISLLRVNALNTSQ---SNMLIL 702

Query: 565 QLCSGVDENAVGNCAELVFAPID-------ASFSDDA--PIIPSGFRIIPLDSGKDTPSP 615
           Q  S  DE+     + +V+AP+D           D A   ++PSGF I+P          
Sbjct: 703 QESS-TDESG----SLIVYAPVDIPAMNLVMQGGDPAYVALLPSGFAILP---------- 747

Query: 616 NRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRG 675
                      +G T   +S  SS++ G    ++T+AFQ          +   +   V  
Sbjct: 748 ------EGPRSIGTTPETSSRASSSEPG---CLLTVAFQILVSNVPTAKLNLESVTTVNS 798

Query: 676 IIA-SVQRVALALS 688
           +I+ +VQR+  ALS
Sbjct: 799 LISCTVQRIKTALS 812



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 76/174 (43%), Gaps = 41/174 (23%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           ++ R+T  Q++ +E ++ ECP P   +R QL RE      +EP+Q+K WFQNRR + K  
Sbjct: 122 RFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSREL----GLEPRQVKFWFQNRRTQMKAH 177

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +E            A N +L  EN+RL+        EN   R+  +NA     T   C  
Sbjct: 178 QE-----------RAENSMLRAENERLRS-------ENIAMREALKNA-----TCPHCGG 214

Query: 146 VVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG 199
             T G+     QQ              L I    L + L + +  A +++  PG
Sbjct: 215 PATLGEMSYDEQQ--------------LRIENAHLKDELDRVSSLAAKYLSKPG 254


>gi|357144757|ref|XP_003573403.1| PREDICTED: homeobox-leucine zipper protein ROC1-like [Brachypodium
           distachyon]
          Length = 812

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 124/548 (22%), Positives = 220/548 (40%), Gaps = 108/548 (19%)

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
           LL +A      + S ATG A    +  G   G   +G     +G    A+R   +V +  
Sbjct: 332 LLQMARVDEPLWSSSATGEAALEEEEYGRVYGARGLG--PRQYGLKPEASRGANVVIMTH 389

Query: 232 TRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----IELLYMQLYAPTTLAPARD 283
             + EIL D   +     S+        VL TG +G     ++++ M+   P+ L P R+
Sbjct: 390 ASLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYDGALQVMSMEFQVPSPLVPTRE 449

Query: 284 FWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIH 343
            + +RY     +GS  V + SL++ +  P+       V+    PSG LI+    G S + 
Sbjct: 450 SYFVRYCKHNPEGSWAVVDVSLDSLRPSPA-------VKCRRRPSGCLIQELPNGYSKVT 502

Query: 344 IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQPSVTG------- 395
            V+H++++  SV ++ +PL  S      K  +  L R   +++  ++     G       
Sbjct: 503 WVEHVEVDDRSVHDIYKPLVNSGLAFGAKRWVGTLGRQCERLASAMASSIPNGDLGVITS 562

Query: 396 -WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS---PSKMMGV 451
             GR+  ++  L++R+   F   +       W+ L   G +DV V    S   P +  G+
Sbjct: 563 VEGRK--SMLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGI 620

Query: 452 QLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKA 509
                         VL A  S  L  V P  +  FLR+   RSEW     D  S   +  
Sbjct: 621 --------------VLNAATSFWLP-VSPNTVFDFLRDETSRSEW-----DILSNGGIV- 659

Query: 510 GPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSG 569
                          Q +  +A+  +H   + ++++ +    + +M++     L + C+ 
Sbjct: 660 ---------------QEMAHIANGRDHGNCVSLLRVNSANSNQSNMLI-----LQESCT- 698

Query: 570 VDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLD 620
            DE+     + +V+AP+D             D   ++PSGF I+P     D PS      
Sbjct: 699 -DESG---SSYVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-----DGPS------ 743

Query: 621 LASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA-S 679
            A    +   G  A+G          S++T+AFQ   +      ++  +   V  +IA +
Sbjct: 744 -APLSGINEEGGVAAGKGG-------SLLTVAFQILVDSVPTAKLSLGSVATVNSLIACT 795

Query: 680 VQRVALAL 687
           V+R+  A+
Sbjct: 796 VERIKAAV 803



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 121 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 176

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +++E S+L+A N KL A N
Sbjct: 177 HEKQENSQLRAENDKLRAEN 196


>gi|75134886|sp|Q6ZAR0.1|ROC1_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC1; AltName:
           Full=GLABRA 2-like homeobox protein 1; AltName:
           Full=HD-ZIP protein ROC1; AltName: Full=Homeodomain
           transcription factor ROC1; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 1
 gi|38636931|dbj|BAD03194.1| roc1(homeobox protein) [Oryza sativa Japonica Group]
 gi|38637066|dbj|BAD03323.1| roc1(homeobox protein) [Oryza sativa Japonica Group]
          Length = 784

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 114/513 (22%), Positives = 208/513 (40%), Gaps = 110/513 (21%)

Query: 208 GIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSG 263
           G+    +G    A+R   +V +  + + EIL D   +     S+        VL TG +G
Sbjct: 342 GLGPKQYGLKSEASRHGAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAG 401

Query: 264 T----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
                ++++ M+   P+ L P R+ + +RY     DG+  V + SL++ +  P       
Sbjct: 402 NYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLRPSPVQ----- 456

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL- 378
             +    PSG LI+    G S +  V+H++++  SV  + +PL  S      K  +  L 
Sbjct: 457 --KCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLD 514

Query: 379 RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
           R   +++  ++     G         GR+  ++  L++R+   F   +       W+ L 
Sbjct: 515 RQCERLASAMASNIPNGDLGVITSVEGRK--SMLKLAERMVASFCGGVTASVAHQWTTLS 572

Query: 431 SDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL 487
             G +DV V    S   P +  G+              VL A  S  L  VPPA +  FL
Sbjct: 573 GSGAEDVRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VPPAAVFDFL 617

Query: 488 REH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKL 545
           R+   RSEW   S    +  AV                 Q +  +A+  +H   + ++++
Sbjct: 618 RDETSRSEWDILS----NGGAV-----------------QEMAHIANGRDHGNSVSLLRV 656

Query: 546 ENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPI 596
            +    + +M++     L + C+    +A G  + +V+AP+D             D   +
Sbjct: 657 NSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDIVAMNVVLNGGDPDYVAL 705

Query: 597 IPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGN-KASGDSSTQCGSTKSVITIAFQF 655
           +PSGF I+P                      GP+GN +A+   +       S++T+AFQ 
Sbjct: 706 LPSGFAILP---------------------DGPSGNAQAAVGENGSGSGGGSLLTVAFQI 744

Query: 656 AFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
             +      ++  +   V  +IA +V+R+  A+
Sbjct: 745 LVDSVPTAKLSLGSVATVNSLIACTVERIKAAV 777



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 109 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 164

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E ++L+A N KL A N
Sbjct: 165 HERHENAQLRAENDKLRAEN 184


>gi|302398853|gb|ADL36721.1| HD domain class transcription factor [Malus x domestica]
          Length = 824

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 130/302 (43%), Gaps = 42/302 (13%)

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----IE 266
           G    A+R  G+V ++   + E L D   W      V       +V+ +G  GT    ++
Sbjct: 376 GFVSEASRESGMVIINSLTLVETLMDSNRWLEMFPGVIARTSTTDVISSGMGGTRNGALQ 435

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEML 326
           L++ +L   + L P R+   LR+   L +G   V + S++  ++      AP F+    L
Sbjct: 436 LMHAELQVLSPLVPVREVNFLRFCKQLAEGVWAVVDVSVDVIRDTSG---APTFMNCRRL 492

Query: 327 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR---HLRQ 383
           PSG +++    G S +  V+H + +   V ++ RPL  S      +  +A L+     + 
Sbjct: 493 PSGCVVQDMPNGYSRVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWVATLQRQSEFQA 552

Query: 384 ISQEVSQPS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID-DV 437
           I    S PS     +T  GRR  ++  L+QR++  F   +   T   W+ L +  +D DV
Sbjct: 553 ILMSSSVPSRDHTAITASGRR--SMLKLAQRMTDNFCAGVCASTVHKWTKLNAGNVDEDV 610

Query: 438 TVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RS 492
            V    S   P +  GV              VL A  S+ L  V P  L  FLR+   RS
Sbjct: 611 RVMTRESLDDPGEPPGV--------------VLSAATSVWLP-VSPQRLFDFLRDERLRS 655

Query: 493 EW 494
           EW
Sbjct: 656 EW 657



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 11/104 (10%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M  +SG  +D+ D+  +K      +Y R+TP+Q++ LE L+ ECP P   +R +L R   
Sbjct: 101 MDGASGDDQDAADNNPRK----KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRL- 155

Query: 62  ILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMN 102
              N+E +Q+K WFQNRR + K   +R E S L+  N KL A N
Sbjct: 156 ---NLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 196


>gi|19072102|dbj|BAB85750.1| Roc1 [Oryza sativa]
          Length = 784

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 114/513 (22%), Positives = 208/513 (40%), Gaps = 110/513 (21%)

Query: 208 GIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSG 263
           G+    +G    A+R   +V +  + + EIL D   +     S+        VL TG +G
Sbjct: 342 GLGPKQYGLKSEASRHGAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAG 401

Query: 264 T----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
                ++++ M+   P+ L P R+ + +RY     DG+  V + SL++ +  P       
Sbjct: 402 NYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLRPSPVQ----- 456

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL- 378
             +    PSG LI+    G S +  V+H++++  SV  + +PL  S      K  +  L 
Sbjct: 457 --KCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLD 514

Query: 379 RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
           R   +++  ++     G         GR+  ++  L++R+   F   +       W+ L 
Sbjct: 515 RQCERLASAMASNIPNGDLGVITSVEGRK--SMLKLAERMVASFCGGVTASVAHQWTTLS 572

Query: 431 SDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL 487
             G +DV V    S   P +  G+              VL A  S  L  VPPA +  FL
Sbjct: 573 GSGAEDVRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VPPAAVFDFL 617

Query: 488 REH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKL 545
           R+   RSEW   S    +  AV                 Q +  +A+  +H   + ++++
Sbjct: 618 RDETSRSEWDILS----NGGAV-----------------QEMAHIANGRDHGNSVSLLRV 656

Query: 546 ENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPI 596
            +    + +M++     L + C+    +A G  + +V+AP+D             D   +
Sbjct: 657 NSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDIVAMNVVLNGGDPDYVAL 705

Query: 597 IPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGN-KASGDSSTQCGSTKSVITIAFQF 655
           +PSGF I+P                      GP+GN +A+   +       S++T+AFQ 
Sbjct: 706 LPSGFAILP---------------------DGPSGNAQAAVGENGSGSGGGSLLTVAFQI 744

Query: 656 AFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
             +      ++  +   V  +IA +V+R+  A+
Sbjct: 745 LVDSVPTAKLSLGSVATVNSLIACTVERIKAAV 777



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 109 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 164

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E ++L+A N KL A N
Sbjct: 165 HERHENAQLRAENDKLRAEN 184


>gi|197116197|dbj|BAG68838.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. halleri]
          Length = 671

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 136/646 (21%), Positives = 240/646 (37%), Gaps = 136/646 (21%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R+T  Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+R   + +  +
Sbjct: 30  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNKR--NQMKINS 83

Query: 89  SRLQAVNRKLTAMNKLLMEENDR-------------------LQKQVSQLVYENTFFRQQ 129
            RL+ +  +      LL +   R                   +  +V +L+ ENT   ++
Sbjct: 84  DRLENITLREDHDRLLLTQHQLRSAMLYCSCNICGRATNCGDIDYEVQKLIVENTILERE 143

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASP----AGLLSIAEETLTEFLS 185
             N           + +V+  Q    P     +P  +A+P     G     E+  + FL 
Sbjct: 144 I-NQLYSKIPSRPNQMLVSPSQ---PPHCSSSNPGINATPELGLGGGTRTTEKERSMFLD 199

Query: 186 KATGTAVEWVQMPGMK---PGPDSIGIVAISH----------------GCTGVAARACGL 226
            A     E +++  M       DS    A+S                 G    A+R  GL
Sbjct: 200 LAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREIGL 259

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTL 278
           V +    + +   D   W     S+  V     V+PTGS    SG+++ +  +    + L
Sbjct: 260 VPMTCLTLVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVISPL 319

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
            P R    LRY   L  G  VV + + +        P    +  +  LPSG  I     G
Sbjct: 320 VPKRQVTFLRYCKELRHGLWVVVDVTPDKN------PTLLSYGGSNRLPSGLFIADMANG 373

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQ-------EVSQ 390
            S +  ++  +     +  + +PL  S   +     +A L RH   +S        E+S 
Sbjct: 374 YSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLAEIS- 432

Query: 391 PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMG 450
           P ++  G   A +  L+QR++  +   +   + + W  ++ +         N +P+  MG
Sbjct: 433 PGLSAKG--AAEVVKLAQRMTLNYYTGITSSSGDKWEKIQVE---------NVAPN--MG 479

Query: 451 VQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEWADSSIDAYSAAAVK 508
             +      P   + +L + A+ +   V    L  FL     R EW   + +      ++
Sbjct: 480 FMIRKNLNEPGEHSGILLSAATSVWFPVNQKTLFAFLSNPSFRHEWDTLTNNTRMEETIR 539

Query: 509 AGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 568
                                +     H   + ++K           I+ +D  +LQ   
Sbjct: 540 ---------------------IQKAKRHGNIISLLK-----------IVGNDTLVLQ--- 564

Query: 569 GVDENAVGNCAELVFAPIDAS---------FSDDAPIIPSGFRIIP 605
            +  +A G  A +V+AP++ +          SD   ++PSGF I+P
Sbjct: 565 EIWNDASG--AMVVYAPVETNPMEWVKRGGNSDSVQLLPSGFSIMP 608


>gi|449468346|ref|XP_004151882.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
          Length = 764

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 124/294 (42%), Gaps = 40/294 (13%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----IELLYMQ 271
           A+R   +V ++   + EIL D   W      +      + VL TG +G     ++++  +
Sbjct: 346 ASRESAVVIMNHINLVEILMDVNQWSTLFSGIVSRAMTLEVLSTGVAGNYNGALQVMTSE 405

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
              P+ L P R+ + +RY     DG+ VV + SL++ +  P        VR    PSG L
Sbjct: 406 FQVPSPLVPTRESYYVRYCKQHGDGTWVVVDVSLDDLRPTPG-------VRCRRRPSGCL 458

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQ 390
           I+    G S +  V+H++++   V  + + L  S      K  +  L R   +++  ++ 
Sbjct: 459 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGQAFGAKRWVTTLDRQCERLASAMAT 518

Query: 391 PSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN 442
              TG         GR+  ++  L++R+   F   ++  T   W+ L   G DDV V   
Sbjct: 519 NIPTGDVGVITNQEGRK--SMLKLAERMVISFCAGVSASTTHTWTTLSGTGADDVRVMTR 576

Query: 443 SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
            S               P   + ++ + A+     VPP  +  FLR+   RSEW
Sbjct: 577 KSIDD------------PGRPHGIVLSAATSFWLPVPPKRIFDFLRDENSRSEW 618



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 102 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 157

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E ++L+  N KL A N
Sbjct: 158 HERHENTQLRTENEKLRADN 177


>gi|147811086|emb|CAN61351.1| hypothetical protein VITISV_023503 [Vitis vinifera]
          Length = 784

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 123/521 (23%), Positives = 208/521 (39%), Gaps = 111/521 (21%)

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR--DCR--SVEVV 254
           GMKP            G    + R  G+V ++   + E L D   W     C        
Sbjct: 339 GMKPS-----------GFVTESTRETGMVIINSLALVETLMDSNRWAEMFPCMIARTSTT 387

Query: 255 NVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQN 310
           +V+ +G  GT    ++L++ +L   + L P R+   LR+     +G   V + S++  + 
Sbjct: 388 DVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRE 447

Query: 311 GPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIA 370
                 AP FV    LPSG +++    G S +  V+H + +  +V ++ RPL  S     
Sbjct: 448 ---TSVAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESAVHQLYRPLLGSGMGFG 504

Query: 371 QKTTMAALRHLRQ-----ISQEVSQPS------VTGWGRRPAALRALSQRLSRGFNEALN 419
            +  +A L+  RQ     I    + P+      +T  GRR  ++  L+QR++  F   + 
Sbjct: 505 AQRWVATLQ--RQCECLAILMSSTVPTRDHTAAITAGGRR--SMLKLAQRMTDNFCAGVC 560

Query: 420 GFTDEGWSMLESDGID-DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDV 478
             T   W+ L +  +D DV V    S               P     ++ + A+ +   V
Sbjct: 561 ASTVHKWNKLCAGNVDEDVRVMTRKSVDD------------PGEPPGIVLSAATSVWLPV 608

Query: 479 PPAILLRFLREHR--SEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEH 536
            P  L  FLR+ R  SEW     D  S      GP             Q +  +A   +H
Sbjct: 609 SPQRLFDFLRDERLRSEW-----DILS----NGGPM------------QEMAHIAKGQDH 647

Query: 537 EEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------AS 589
              + +++   M   +  M++     L + C     +A G+   +V+AP+D        +
Sbjct: 648 GNCVSLLRASAMNANQSSMLI-----LQETCI----DAAGSL--VVYAPVDIPAMHVVMN 696

Query: 590 FSDDA--PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKS 647
             D A   ++PSGF I+P   G  +  PN      S    GP  N+ SG          S
Sbjct: 697 GGDSAYVALLPSGFAIVP--DGPGSRGPNSGXHTNSG---GP--NRVSG----------S 739

Query: 648 VITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
           ++T+AFQ          +   + + V  +I+ +VQ++  AL
Sbjct: 740 LLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL 780



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 12/104 (11%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M  +SG  +D+ D+  +K      +Y R+TP+Q++ LE L+ ECP P   +R +L R   
Sbjct: 69  MDGASGDDQDAADNPPRKK-----RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRL- 122

Query: 62  ILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMN 102
              ++E +Q+K WFQNRR + K   +R E S L+  N KL A N
Sbjct: 123 ---SLETRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRAEN 163


>gi|242078393|ref|XP_002443965.1| hypothetical protein SORBIDRAFT_07g005180 [Sorghum bicolor]
 gi|241940315|gb|EES13460.1| hypothetical protein SORBIDRAFT_07g005180 [Sorghum bicolor]
          Length = 781

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 104/460 (22%), Positives = 187/460 (40%), Gaps = 105/460 (22%)

Query: 256 VLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 311
           VL TG +G+    ++++ M+   P+ L P R+ + +RY     DG+  V + SL++ +  
Sbjct: 392 VLSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPS 451

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
           P M       +    PSG LI+    G S +  V+H++++  SV  + RPL  S      
Sbjct: 452 PVM-------KCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFGA 504

Query: 372 KTTMAAL-RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFT 422
           K  +  L R   +++  ++     G         GR+  ++  L++R+   F   +    
Sbjct: 505 KRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGRK--SMLKLAERMVASFCGGVTASA 562

Query: 423 DEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
              W+ L   G +DV V    S   P +  G+              VL A  S  L  VP
Sbjct: 563 AHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VP 607

Query: 480 PAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHE 537
           P  +  FLR+   RSEW   S    +  AV                 Q +  +A+  +H 
Sbjct: 608 PKRVFDFLRDETSRSEWDILS----NGGAV-----------------QEMAHIANGRDHG 646

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------A 588
             + ++++ +    + +M++     L + C+    +A G  + +V+AP+D          
Sbjct: 647 NCVSLLRVNSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDVVAMNVVLNG 695

Query: 589 SFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSV 648
              D   ++PSGF I+P                      GP G    G+ +       S+
Sbjct: 696 GDPDYVALLPSGFAILP---------------------DGPPGMAPHGEGAALETGGGSL 734

Query: 649 ITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
           +T+AFQ   +      ++  +   V  +IA +V+R+  A+
Sbjct: 735 LTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAV 774



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 102 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 157

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R+E ++L+A N KL A N
Sbjct: 158 HERQENAQLRAENDKLRAEN 177


>gi|449448174|ref|XP_004141841.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 738

 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 152/714 (21%), Positives = 267/714 (37%), Gaps = 142/714 (19%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QR 85
           R+T EQ+  +E L+ E P P   +RQQL  +      +  KQIK WFQNRR + K   +R
Sbjct: 88  RHTSEQIREMEMLFKESPHPDEKQRQQLSEKL----GLSCKQIKFWFQNRRTQIKAIHER 143

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL---------------VYENTFFRQQT 130
            E + L+    KL        EEN  +++ +S+                    T  +QQ 
Sbjct: 144 HENALLKGEMEKLR-------EENQAMREMISKSSCTKGCCSASTNSLDAIFTTSDQQQQ 196

Query: 131 QNAATLATTDTSCESVVT-------SGQHHLTPQQQHQHPPRDASPAG---------LLS 174
           Q    +A      E + T       +G  +   +   + P R+   +          ++ 
Sbjct: 197 QLVTEIARLKAEVERLRTALDKYAPAGTENNKEEGGIERPGRNLEKSKSIFGLEKGRVML 256

Query: 175 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGI--------VAISHGCTGVAA-RACG 225
           I +  + E +         WV+   ++ G + +          V    G   V A R  G
Sbjct: 257 IGKRAIEEVVKMGDSDEPLWVR--SVETGRELLNYDVYMKELAVGNERGKREVEASRETG 314

Query: 226 LVGLDPTRVAEILKDRPSWYR-------DCRSVEVV-NVLPTGSSGTIELLYMQLYAPTT 277
           +V  D  R+ +   D   W            ++EVV N       G ++L++ +L   T 
Sbjct: 315 VVFADLHRLVQSFMDVVQWKEMFPSMISKASTMEVVFNGDGNNRDGAVQLMFAELQMLTP 374

Query: 278 LAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEG 337
             P R+ + +R    L  G  VV + S++   +      +    R    PSG +I+    
Sbjct: 375 TIPPREIFFIRSCKQLSPGKWVVADVSIDKVGDHVDSSSS----RCRKRPSGCIIQDQSD 430

Query: 338 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR-----HLRQISQEVSQPS 392
           G   +  V+H +     +  + R +  S  +      M+ L+      +  ++  V    
Sbjct: 431 GHCKVTWVEHWECHKIGLHTIYRTIVNSGLIFGATHWMSTLQMHCEWQVFFMATNVPMKD 490

Query: 393 VTGW---GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN---SSPS 446
            TG    G R + LR L+QR++    +A+       W+ ++S   + + +       +P 
Sbjct: 491 STGITTVGGRKSVLR-LAQRMTSSIYQAIGASNSHTWTKVQSKIGETIRIASRKNLKNPH 549

Query: 447 KMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSA 504
           +  G+              +LCA AS+ L  V P +L  FL +   R EW D  + +  A
Sbjct: 550 EPTGL--------------ILCAVASIWLP-VSPKLLFEFLIDEARRPEW-DVMLSSGQA 593

Query: 505 AAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLL 564
             +          +  N G  V +    + E  +++    L N   Y   ++        
Sbjct: 594 EMLAN------FAKGQNRGNAVTIQAVKSDETNKWILQDSLTN--EYESTVVYAQ----- 640

Query: 565 QLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASA 624
                VD N + +    V A  D   S +   +P+GF I+P         P R L ++S+
Sbjct: 641 -----VDMNGMKS----VMAGFD---SGNITTLPTGFSILP------DGHPTRPLVISSS 682

Query: 625 LEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA 678
            E          +  T+ G   S++T+A Q            S + +YV  I++
Sbjct: 683 KE----------ERETRGG---SLLTVASQILVSPSPTAETTSQSVEYVNNIMS 723


>gi|449454480|ref|XP_004144982.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
 gi|449473159|ref|XP_004153804.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
 gi|449522284|ref|XP_004168157.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 841

 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 119/518 (22%), Positives = 206/518 (39%), Gaps = 97/518 (18%)

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR--DCR--SVEVV 254
           GMKP           +G    A+R  G+V ++   + E L D   W     C        
Sbjct: 388 GMKP-----------NGFVTEASRESGMVIINSLALVETLMDSNRWAEMFPCMIARTTTT 436

Query: 255 NVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQN 310
           +V+ TG  GT    ++L++ +L   + L P R+   LR+     +G   V + S++  + 
Sbjct: 437 DVISTGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDAMRE 496

Query: 311 GPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST-LI 369
            P+      F     LPSG +++    G S +  V+H + +   V ++ RPL  S     
Sbjct: 497 TPT-GGGSSFGNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDDSQVHQLYRPLLSSGMGFG 555

Query: 370 AQKTTMAALRHLRQISQEVS-------QPSVTGWGRRPAALRALSQRLSRGFNEALNGFT 422
           AQ+      R    ++  +S         ++T  GRR  ++  L+QR++  F   +   T
Sbjct: 556 AQRWVTTLQRQCECLAILMSSAVPIRDHTAITAGGRR--SMLKLAQRMTANFCAGVCAST 613

Query: 423 DEGWSMLESDGID-DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPA 481
              W+ L +  +D DV V    S               P     ++ + A+ +   V P 
Sbjct: 614 VHKWNKLNAGSVDEDVRVMTRKSVDD------------PGEPPGIVLSAATSVWLPVSPQ 661

Query: 482 ILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEF 539
            L  FLR+   RSEW     D  S      GP             Q +  +A   +H   
Sbjct: 662 RLFDFLRDERLRSEW-----DILS----NGGPM------------QEMAHIAKGQDHGNC 700

Query: 540 LEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------ASFSD 592
           + +++   M   +  M++     L + C     +A G+   +V+AP+D        +  D
Sbjct: 701 VSLLRASAMNANQSSMLI-----LQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGD 749

Query: 593 DA--PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVIT 650
            A   ++PSGF I+P   G  T     T   + +   GP   +A+G          S++T
Sbjct: 750 SAYVALLPSGFAIVP--DGAVTGGLTATNGSSPSGGEGPQSQRAAGGG--------SLLT 799

Query: 651 IAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
           +AFQ          +   + + V  +I+ +VQ++  AL
Sbjct: 800 VAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL 837



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 27/114 (23%)

Query: 7   GGSRDSRDSGGQKMIMDN----GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRE-CP 61
           GGS D +D+       DN     +Y R+TP+Q++ LE ++ ECP P   +R +L R  C 
Sbjct: 120 GGSGDDQDAA------DNPPRKKRYHRHTPQQIQELEAVFKECPHPDEKQRLELSRRLC- 172

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQ 115
               +E +Q+K WFQNRR + K + E              N LL +END+L+ +
Sbjct: 173 ----LETRQVKFWFQNRRTQMKTQLERHE-----------NTLLRQENDKLRAE 211


>gi|449519629|ref|XP_004166837.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 738

 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 152/714 (21%), Positives = 266/714 (37%), Gaps = 142/714 (19%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QR 85
           R+T EQ+  +E L+ E P P   +RQQL  +      +  KQIK WFQNRR + K   +R
Sbjct: 88  RHTSEQIREMEMLFKESPHPDEKQRQQLSEKL----GLSCKQIKFWFQNRRTQIKAIHER 143

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL---------------VYENTFFRQQT 130
            E + L+    KL        EEN  +++ +S+                    T  +QQ 
Sbjct: 144 HENALLKGEMEKLR-------EENQAMREMISKSSCTKGCCSASTNSLDAIFTTSDQQQQ 196

Query: 131 QNAATLATTDTSCESVVT-------SGQHHLTPQQQHQHPPRDASPAG---------LLS 174
           Q    +A      E + T       +G  +   +   + P R+   +          ++ 
Sbjct: 197 QLVTEIARLKAEVERLRTALDKYAPAGTENNKEEGGIERPGRNLEKSKSIFGLEKGRVML 256

Query: 175 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGI--------VAISHGCTGVAA-RACG 225
           I +  + E +         WV+   ++ G + +          V    G   V A R  G
Sbjct: 257 IGKRAIEEVVKMGDSDEPLWVR--SVETGRELLNYDVYMKELAVGNERGKREVEASRETG 314

Query: 226 LVGLDPTRVAEILKDRPSWYR-------DCRSVEVV-NVLPTGSSGTIELLYMQLYAPTT 277
           +V  D  R+ +   D   W            ++EVV N       G ++L++ +L   T 
Sbjct: 315 VVFADLHRLVQSFMDVVQWKEMFPSMISKASTMEVVFNGDGNNRDGAVQLMFAELQMLTP 374

Query: 278 LAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEG 337
             P R+ + +R    L  G  VV + S++   +      +    R    PSG +I+    
Sbjct: 375 TIPPREIFFIRSCKQLSPGKWVVADVSIDKVGDHVDSSSS----RCRKRPSGCIIQDQSD 430

Query: 338 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR-----HLRQISQEVSQPS 392
           G   +  V+H +     +  + R +  S  +      M+ L+      +  ++  V    
Sbjct: 431 GHCKVTWVEHWECHKIGLHTIYRTIVNSGLIFGATHWMSTLQMHCEWQVFFMATNVPMKD 490

Query: 393 VTGW---GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN---SSPS 446
            TG    G R + LR L+QR++    +A+       W+ ++S   + + +       +P 
Sbjct: 491 STGITTVGGRKSVLR-LAQRMTSSIYQAIGASNSHTWTKVQSKIGETIRIASRKNLKNPH 549

Query: 447 KMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSA 504
           +  G+              +LCA AS+ L  V P +L  FL +   R EW D  +    A
Sbjct: 550 EPTGL--------------ILCAVASIWLP-VSPKLLFEFLIDEARRPEW-DVMLSGGQA 593

Query: 505 AAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLL 564
             +          +  N G  V +    + E  +++    L N   Y   ++        
Sbjct: 594 EMLAN------FAKGQNRGNAVTIQAVKSDETNKWILQDSLTN--EYESTVVYAQ----- 640

Query: 565 QLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASA 624
                VD N + +    V A  D   S +   +P+GF I+P         P R L ++S+
Sbjct: 641 -----VDMNGMKS----VMAGFD---SGNITTLPTGFSILP------DGHPTRPLVISSS 682

Query: 625 LEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA 678
            E          +  T+ G   S++T+A Q            S + +YV  I++
Sbjct: 683 KE----------ERETRGG---SLLTVASQILVSPSPTAETTSQSVEYVNNIMS 723


>gi|27817987|dbj|BAC55751.1| putative DNA-directed RNA polymerase Iia [Oryza sativa Japonica
           Group]
          Length = 286

 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 4/52 (7%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKV 73
           ++ G Y    P +VEALER+Y +CPKP+S RRQQL+ ECPIL+NIEPKQIKV
Sbjct: 117 LEGGTY----PLEVEALERVYTDCPKPTSARRQQLLCECPILANIEPKQIKV 164


>gi|449479674|ref|XP_004155671.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 549

 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 128/306 (41%), Gaps = 40/306 (13%)

Query: 208 GIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSW-------YRDCRSVEVVN-VLPT 259
           GIV    G    A+R   +V ++  ++ +I  D   W            +VE+++  LP 
Sbjct: 110 GIVGKPMGFRTEASRVSAVVFMNHMKLVDIFMDATQWSTVFCGIVSRASTVEILSPGLPG 169

Query: 260 GSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
             +G + ++  +   P+ L P R+ + +RY     DGS  V + SL+  +  P     P+
Sbjct: 170 NFNGALHVMSAEFQVPSPLVPTRENYFVRYCKQQTDGSWAVADVSLDTLRPSP----IPN 225

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL- 378
             R    PSG LI+    G S I  V+H++++   VP + R L  S      K  +A L 
Sbjct: 226 TRRK---PSGCLIQELPNGYSKITWVEHVEVDETGVPTMYRTLVNSGLAFGAKRWVATLD 282

Query: 379 RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
           R   + +  ++    TG         GR+  ++  L++R+   F   +   +   W+ L 
Sbjct: 283 RQSERFATSIATTIPTGDLRVISSIEGRK--SMLKLAERMVTSFCAGVGASSVHAWTALP 340

Query: 431 SDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH 490
           +   D+V V    S  +            P     V+ + A+     V P ++  FLR+ 
Sbjct: 341 AAAGDEVRVVTRKSTDE------------PGRPPGVVLSAATSFWIPVSPKVVFDFLRKE 388

Query: 491 --RSEW 494
             RSEW
Sbjct: 389 KSRSEW 394


>gi|224028395|gb|ACN33273.1| unknown [Zea mays]
 gi|345194178|tpg|DAA34954.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413921155|gb|AFW61087.1| outer cell layer5a [Zea mays]
          Length = 796

 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 105/460 (22%), Positives = 187/460 (40%), Gaps = 103/460 (22%)

Query: 256 VLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 311
           VL TG +G+    ++++ M+   P+ L P R+ + +RY     DG+  V + SL++ +  
Sbjct: 404 VLSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPS 463

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
           P        ++    PSG LI+    G S +  V+H++++  SV  + RPL  S      
Sbjct: 464 P-------VIKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFGA 516

Query: 372 KTTMAAL-RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFT 422
           K  +  L R   +++  ++     G         GR+  ++  L++R+   F   +    
Sbjct: 517 KRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGRK--SMLKLAERMVASFCGGVTASA 574

Query: 423 DEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
              W+ L   G +DV V    S   P +  G+              VL A  S  L  VP
Sbjct: 575 AHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VP 619

Query: 480 PAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHE 537
           P  +  FLR+   RSEW   S    +  AV                 Q +  +A+  +H 
Sbjct: 620 PKRVFDFLRDETSRSEWDILS----NGGAV-----------------QEMAHIANGRDHG 658

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------A 588
             + ++++ +    + +M++     L + C+    +A G  + +V+AP+D          
Sbjct: 659 NCVSLLRVNSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDVVAMNVVLNG 707

Query: 589 SFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSV 648
              D   ++PSGF I+P     D P               P G   S       G   S+
Sbjct: 708 GDPDYVALLPSGFAILP-----DGPP--------------PAGAAPSHGEGLDTGGGGSL 748

Query: 649 ITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
           +T+AFQ   +      ++  +   V  +IA +V+R+  A+
Sbjct: 749 LTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAV 788



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E ++L+A N KL A N
Sbjct: 163 HERHENAQLRAENDKLRAEN 182


>gi|4325343|gb|AAD17342.1| contains similarity to homeobox domains (Pfam: PF00046, Score,36.5,
           E=6.9e-08, N=1) [Arabidopsis thaliana]
          Length = 772

 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 114/525 (21%), Positives = 208/525 (39%), Gaps = 122/525 (23%)

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVN------VLPTGSSGT---- 264
           G    A+R   +V ++   + EIL D   W   C    +V+      VL TG +G     
Sbjct: 312 GLRSEASRQSAVVIMNHINLVEILMDVNQW--SCVFSGIVSRALTLEVLSTGVAGNYNGA 369

Query: 265 IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE 324
           ++++  +   P+ L P R+ + +RY     DGS  V + SL++ +  PS P     +R  
Sbjct: 370 LQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLR--PSTP----ILRTR 423

Query: 325 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQ 383
             PSG LI+    G S +  ++HM+++  SV  + +PL +S      K  +A L R   +
Sbjct: 424 RRPSGCLIQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCER 483

Query: 384 ISQEVSQP---SVTGWGR----------------------RPAALRALSQRLSRGFNEAL 418
           ++  ++      ++G G                       R + L+ L++R+   F   +
Sbjct: 484 LASSMASNIPGDLSGRGYSDQFKYVGAKLNENVMITSPEGRKSMLK-LAERMVMSFCSGV 542

Query: 419 NGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDV 478
              T   W+ + + G DDV V    S               P     ++ + A+     V
Sbjct: 543 GASTAHAWTTMSTTGSDDVRVMTRKSMDD------------PGRPPGIVLSAATSFWIPV 590

Query: 479 PPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEH 536
            P  +  FLR+   R EW     D  S                    G ++  +AH    
Sbjct: 591 APKRVFDFLRDENSRKEW-----DILS-------------------NGGMVQEMAHIANG 626

Query: 537 EE---FLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID------ 587
            E    + ++++ +    + +M++     L + C+    +A G  + +++AP+D      
Sbjct: 627 HEPGNCVSLLRVNSGNSSQSNMLI-----LQESCT----DASG--SYVIYAPVDIVAMNV 675

Query: 588 ---ASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGS 644
                  D   ++PSGF I+P D        N+  ++ S              SS  CG 
Sbjct: 676 VLSGGDPDYVALLPSGFAILP-DGSVGGGDGNQHQEMVSTT------------SSGSCGG 722

Query: 645 TKSVITIAFQFAFEMHLQENVASMARQYVRGII-ASVQRVALALS 688
             S++T+AFQ   +      ++  +   V  +I  +V+R+  A+S
Sbjct: 723 --SLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVS 765



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 23/113 (20%)

Query: 26  KYVRYTPEQVEALE---------------RLYHECPKPSSMRRQQLIRECPILSNIEPKQ 70
           +Y R+T  Q++ LE               R + ECP P   +R++L R+     N+EP Q
Sbjct: 60  RYHRHTQRQIQELESLKTFSYILSFLEFYRFFKECPHPDDKQRKELSRDL----NLEPLQ 115

Query: 71  IKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           +K WFQN+R + K + E       N+ L + N  L  EN+R ++ +S     N
Sbjct: 116 VKFWFQNKRTQMKAQSERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 164


>gi|1881536|gb|AAB49378.1| meristem L1 layer homeobox protein [Arabidopsis thaliana]
          Length = 718

 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 44/301 (14%)

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYRD-CRSVE---VVNVLPTG----SSGTIE 266
           G    A+R   +V ++   + EIL D   W    C  V     + VL TG     +G ++
Sbjct: 267 GLRSEASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGVRGNYNGALQ 326

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEML 326
           ++  +   P+ L P R+ + +RY     DG   V + SL++ +  P         R+   
Sbjct: 327 VMTAEFQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-------ITRSRRR 379

Query: 327 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQIS 385
           PSG LI+  + G S +  V+H++++  SV  + +PL  +      K  +A L R   +++
Sbjct: 380 PSGCLIQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLA 439

Query: 386 QEVSQ-------PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
             ++          +T    R + L+ L++R+   F   +   T + W+ L + G DDV 
Sbjct: 440 SSMASNIPACDLSVITSPEGRKSMLK-LAERMVMSFCTGVGASTADAWTTLSTTGSDDVR 498

Query: 439 VHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSE 493
           V    S   P +  G+ LS    F                  V P  +  FLR+   RSE
Sbjct: 499 VMTRKSMDDPGRPPGIVLSAATSF---------------WIPVAPKRVFDFLRDENSRSE 543

Query: 494 W 494
           W
Sbjct: 544 W 544



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 41/175 (23%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE  + ECP P   +R++L RE     ++EP Q+K WFQN+R + K +
Sbjct: 21  RYHRHTQRQIQELESFFKECPHPDDKQRKELSREL----SLEPLQVKFWFQNKRTQMKAQ 76

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
            E              N++L  END+L+        EN  ++    NA     T  +C  
Sbjct: 77  HERHE-----------NQILKSENDKLRA-------ENNRYKDALSNA-----TCPNCGG 113

Query: 146 VVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
               G+  ++  +QH            L I    L E + + +  A ++V  P M
Sbjct: 114 PAAIGE--MSFDEQH------------LRIENARLREEIDRISAIAAKYVGKPLM 154


>gi|222640586|gb|EEE68718.1| hypothetical protein OsJ_27379 [Oryza sativa Japonica Group]
          Length = 230

 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 4/52 (7%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKV 73
           ++ G Y    P +VEALER+Y +CPKP+S RRQQL+ ECPIL+NIEPKQIKV
Sbjct: 125 LEGGTY----PLEVEALERVYTDCPKPTSARRQQLLCECPILANIEPKQIKV 172


>gi|197116195|dbj|BAG68837.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. gemmifera]
          Length = 689

 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 140/655 (21%), Positives = 243/655 (37%), Gaps = 154/655 (23%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R+T  Q + LE +Y E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 48  RHTAYQTQELENVYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 101

Query: 89  SRLQAVNRKLTAMNKLLMEENDRL----------------------------QKQVSQLV 120
            RL+         N +L E++DRL                              +V +L+
Sbjct: 102 DRLE---------NIILREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLI 152

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASP----AGLLSIA 176
            ENT   ++  N           + +V+  Q    P     +P  +A+P     G     
Sbjct: 153 VENTILEREI-NQLYSKIPSRPNQMLVSPSQ---PPHCSSSNPGINATPELGLGGGTRTT 208

Query: 177 EETLTEFLSKATGTAVEWVQMPGMK---PGPDSIGIVAISH----------------GCT 217
           E+  + FL  A     E +++  M       DS    A+S                 G  
Sbjct: 209 EKERSMFLDLAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHV 268

Query: 218 GVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLY 269
             A+R  GLV +    + +   D   W     S+  V     V+PTGS    SG+++ + 
Sbjct: 269 VEASREIGLVPMTCLTLVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQ 328

Query: 270 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSG 329
            +    + L P R    LRY   L  G  VV +  +   QN    P    +  +  LPSG
Sbjct: 329 AEFQVISPLVPKRQVTFLRYCKELRHGLWVVVD--VTPDQN----PTLLSYGGSNRLPSG 382

Query: 330 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQ-- 386
             I     G S +  ++  +     +  + +PL  S   +     +A L RH   +S   
Sbjct: 383 LFIADMANGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLS 442

Query: 387 -----EVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV 441
                E+S P ++  G   A +  L+QR++  +   +   + + W  ++ +         
Sbjct: 443 STNLAEIS-PGLSAKG--AAEVVKLAQRMTLNYYTGITSSSGDKWEKIQVE--------- 490

Query: 442 NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEWADSSI 499
           N +P+  M   +      P   + +L + A+ +   V    L  FL     R EW   + 
Sbjct: 491 NVAPN--MSFMIRKNVNEPGEHSGILLSAATSVWFPVNQKTLFAFLSNPSFRHEWDTLTN 548

Query: 500 DAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           +      ++                     +     H   + ++K           I+ +
Sbjct: 549 NTRMEETIR---------------------IQKAKRHGNIISLLK-----------IVGN 576

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDAS---------FSDDAPIIPSGFRIIP 605
           D  +LQ    +  +A G  A +V+AP++ +          SD   ++PSGF I+P
Sbjct: 577 DTLVLQ---EIWNDASG--AMVVYAPVETNPMEWVKRGGNSDSVQLLPSGFSIMP 626


>gi|242080491|ref|XP_002445014.1| hypothetical protein SORBIDRAFT_07g002780 [Sorghum bicolor]
 gi|18481701|gb|AAL73523.1|AF466200_2 OCL5 protein [Sorghum bicolor]
 gi|241941364|gb|EES14509.1| hypothetical protein SORBIDRAFT_07g002780 [Sorghum bicolor]
          Length = 803

 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 169/422 (40%), Gaps = 89/422 (21%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----IELLYMQ 271
           A+R   +V ++   + E+L D   W     S+      + VL TG +G     ++L+  +
Sbjct: 350 ASRETVVVIMNHVNLIEMLMDVNQWSTLFSSIVSRAATLEVLSTGVAGNYNGALQLMTAE 409

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
              P+ L P R+   LRY     DGS  V + S+   +   +  QA    R    PSG L
Sbjct: 410 FQMPSPLVPTRESQFLRYCKQHTDGSWAVVDVSVEGLR---ASGQAG--ARGRRRPSGCL 464

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQ 390
           I+    G S +  V+H++ +   V ++ RPL  S      +   AAL R   +++  ++ 
Sbjct: 465 IQEMPNGYSRVTWVEHVEADDMMVHDLYRPLVCSGLAFGARRWAAALERQCERLASAMAS 524

Query: 391 -----PSVTG---------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
                PS  G          GRR  ++  L++R+   F   +   T   W+ L   G +D
Sbjct: 525 GVPAGPSSGGDAVGVVTSVEGRR--SMLRLAERMVTSFCGGVTASTTHQWTKLSGSGAED 582

Query: 437 VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
           V V    S               P     ++   A+     VPPA +  FLR+   RSEW
Sbjct: 583 VRVMTRKSVDD------------PGRPPGIILNAATSFWLPVPPARVFGFLRDDATRSEW 630

Query: 495 ADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQV--ILPLAHTIEHEEFLEVIKLENMAHYR 552
                D  S                   GG V  +  +A+  +H   + ++++ N    +
Sbjct: 631 -----DILSN------------------GGDVQEMAHIANGRDHGNAVSLLRVNNANSNQ 667

Query: 553 EDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRI 603
            +M+      +LQ C     +A G+   +++AP+D             D   ++PSGF I
Sbjct: 668 SNML------ILQECC---TDATGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAI 716

Query: 604 IP 605
           +P
Sbjct: 717 LP 718



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR---E 82
           +Y R+T  Q++ LE  + E P P   +R++L RE      +EP Q+K WFQN+R +   +
Sbjct: 102 RYHRHTQHQIQELEAFFKEYPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 157

Query: 83  KQRKEASRLQAVNRKLTAMN 102
           ++R E  +L+A N KL A N
Sbjct: 158 QERHENMQLRAENEKLRAEN 177


>gi|255566373|ref|XP_002524172.1| homeobox protein, putative [Ricinus communis]
 gi|223536541|gb|EEF38187.1| homeobox protein, putative [Ricinus communis]
          Length = 731

 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 120/546 (21%), Positives = 211/546 (38%), Gaps = 106/546 (19%)

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
           LL +A+     ++S   GT     +   ++  P  IG       C   A+R   LV ++ 
Sbjct: 259 LLRMAQMGEPLWMSSHDGTNSALNEDEYIRIFPRGIGPKPAGFKCE--ASRETALVIMNH 316

Query: 232 TRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----IELLYMQLYAPTTLAPARD 283
             + E L D   W      +      + VL TG +G     ++++  +   PT L P R+
Sbjct: 317 INLVEYLMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQLPTPLVPTRE 376

Query: 284 FWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIH 343
            + +RY     +G+  V + SL+N +  P+        R    PSG LI+    G S + 
Sbjct: 377 SYFVRYCKQHAEGTWAVVDVSLDNLRPSPA-------ARCRRRPSGCLIQEMPNGYSQVT 429

Query: 344 IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQPSVTG------- 395
            ++H++++   V  + + L  S      K  +A L R   +++  ++    TG       
Sbjct: 430 WIEHVEVDDRGVHSLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNIPTGEVGVITN 489

Query: 396 -WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLS 454
             GR+  ++  L++R+   F   ++  T   W+ L   G DDV V    S          
Sbjct: 490 QEGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD------- 540

Query: 455 YVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPC 512
                P     ++ + A+     VPP  +  FLR+   R++W     D  S         
Sbjct: 541 -----PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRNQW-----DILS--------- 581

Query: 513 SLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDE 572
                      G V+  +AH     +    + L  +          S++ +LQ  S  D 
Sbjct: 582 ----------NGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQ---SNMLILQE-SCTDP 627

Query: 573 NAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLAS 623
            A    + +++AP+D             D   ++PSGF I+P              D  +
Sbjct: 628 TA----SFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP--------------DGTT 669

Query: 624 ALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQR 682
           A      G    G+S +  G   S++T+AFQ   +      ++  +   V  +IA +V+R
Sbjct: 670 A-----HGGGIGGESVSAGG---SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVER 721

Query: 683 VALALS 688
           +  ALS
Sbjct: 722 IKAALS 727



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 11/99 (11%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D +D    K      +Y R+T  Q++ +E  + ECP P   +R++L RE      +
Sbjct: 48  GASGDDQDPRPNK----KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GL 99

Query: 67  EPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMN 102
           EP Q+K WFQN+R + K   +R E ++L+  N KL A N
Sbjct: 100 EPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADN 138


>gi|162462636|ref|NP_001105127.1| outer cell layer5a [Zea mays]
 gi|8920427|emb|CAB96425.1| OCL5 protein [Zea mays]
          Length = 795

 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 105/460 (22%), Positives = 187/460 (40%), Gaps = 103/460 (22%)

Query: 256 VLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 311
           VL TG +G+    ++++ M+   P+ L P R+ + +RY     DG+  V + SL++ +  
Sbjct: 403 VLSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPS 462

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
           P        ++    PSG LI+    G S +  V+H++++  SV  + RPL  S      
Sbjct: 463 P-------VIKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFGA 515

Query: 372 KTTMAAL-RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFT 422
           K  +  L R   +++  ++     G         GR+  ++  L++R+   F   +    
Sbjct: 516 KRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGRK--SMLKLAERMVASFCGGVTASA 573

Query: 423 DEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
              W+ L   G +DV V    S   P +  G+              VL A  S  L  VP
Sbjct: 574 AHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VP 618

Query: 480 PAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHE 537
           P  +  FLR+   RSEW   S    +  AV                 Q +  +A+  +H 
Sbjct: 619 PKRVFDFLRDETSRSEWDILS----NGGAV-----------------QEMAHIANGRDHG 657

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------A 588
             + ++++ +    + +M++     L + C+    +A G  + +V+AP+D          
Sbjct: 658 NCVSLLRVNSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDVVAMNVVLNG 706

Query: 589 SFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSV 648
              D   ++PSGF I+P     D P               P G   S       G   S+
Sbjct: 707 GDPDYVALLPSGFAILP-----DGPP--------------PAGAAPSHGEGLDAGGGGSL 747

Query: 649 ITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
           +T+AFQ   +      ++  +   V  +IA +V+R+  A+
Sbjct: 748 LTVAFQILVDSVPTGKLSLGSVATVNSLIACTVERIKAAV 787



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E ++L+A N KL A N
Sbjct: 163 HERHENAQLRAENDKLRAEN 182


>gi|413921156|gb|AFW61088.1| outer cell layer5a [Zea mays]
          Length = 785

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 105/460 (22%), Positives = 187/460 (40%), Gaps = 103/460 (22%)

Query: 256 VLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 311
           VL TG +G+    ++++ M+   P+ L P R+ + +RY     DG+  V + SL++ +  
Sbjct: 393 VLSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPS 452

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
           P        ++    PSG LI+    G S +  V+H++++  SV  + RPL  S      
Sbjct: 453 P-------VIKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFGA 505

Query: 372 KTTMAAL-RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFT 422
           K  +  L R   +++  ++     G         GR+  ++  L++R+   F   +    
Sbjct: 506 KRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGRK--SMLKLAERMVASFCGGVTASA 563

Query: 423 DEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
              W+ L   G +DV V    S   P +  G+              VL A  S  L  VP
Sbjct: 564 AHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VP 608

Query: 480 PAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHE 537
           P  +  FLR+   RSEW   S    +  AV                 Q +  +A+  +H 
Sbjct: 609 PKRVFDFLRDETSRSEWDILS----NGGAV-----------------QEMAHIANGRDHG 647

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------A 588
             + ++++ +    + +M++     L + C+    +A G  + +V+AP+D          
Sbjct: 648 NCVSLLRVNSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDVVAMNVVLNG 696

Query: 589 SFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSV 648
              D   ++PSGF I+P     D P               P G   S       G   S+
Sbjct: 697 GDPDYVALLPSGFAILP-----DGPP--------------PAGAAPSHGEGLDTGGGGSL 737

Query: 649 ITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
           +T+AFQ   +      ++  +   V  +IA +V+R+  A+
Sbjct: 738 LTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAV 777



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 96  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 151

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E ++L+A N KL A N
Sbjct: 152 HERHENAQLRAENDKLRAEN 171


>gi|197116203|dbj|BAG68841.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kawasakiana]
          Length = 689

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 140/655 (21%), Positives = 243/655 (37%), Gaps = 154/655 (23%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R+T  Q + LE +Y E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 48  RHTAYQTQELENVYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 101

Query: 89  SRLQAVNRKLTAMNKLLMEENDRL----------------------------QKQVSQLV 120
            RL+         N +L E++DRL                              +V +L+
Sbjct: 102 DRLE---------NIILREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLI 152

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASP----AGLLSIA 176
            ENT   ++  N           + +V+  Q    P     +P  +A+P     G     
Sbjct: 153 VENTILEREI-NQLYSKIPSRPNQMLVSPSQ---PPHCSSSNPGINATPELGLGGGTRTT 208

Query: 177 EETLTEFLSKATGTAVEWVQMPGMK---PGPDSIGIVAISH----------------GCT 217
           E+  + FL  A     E +++  M       DS    A+S                 G  
Sbjct: 209 EKERSMFLDLAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHV 268

Query: 218 GVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLY 269
             A+R  GLV +    + +   D   W     S+  V     V+PTGS    SG+++ + 
Sbjct: 269 VEASREIGLVPMTCLTLVKTFMDMEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQ 328

Query: 270 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSG 329
            +    + L P R    LRY   L  G  VV +  +   QN    P    +  +  LPSG
Sbjct: 329 AEFQVISPLVPKRQVTFLRYCKELRHGLWVVVD--VTPDQN----PTLLSYGGSNRLPSG 382

Query: 330 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQ-- 386
             I     G S +  ++  +     +  + +PL  S   +     +A L RH   +S   
Sbjct: 383 LFIADMANGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLS 442

Query: 387 -----EVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV 441
                E+S P ++  G   A +  L+QR++  +   +   + + W  ++ +         
Sbjct: 443 STNLAEIS-PGLSAKG--AAEVVKLAQRMTLNYYTGITSSSGDKWEKIQVE--------- 490

Query: 442 NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEWADSSI 499
           N +P+  M   +      P   + +L + A+ +   V    L  FL     R EW   + 
Sbjct: 491 NVAPN--MSFMIRKNVNEPGEHSGILLSAATSVWFPVNQKTLFAFLSNPSFRHEWDTLTN 548

Query: 500 DAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           +      ++                     +     H   + ++K           I+ +
Sbjct: 549 NTRMEETIR---------------------IQKAKRHGNIISLLK-----------IVGN 576

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDAS---------FSDDAPIIPSGFRIIP 605
           D  +LQ    +  +A G  A +V+AP++ +          SD   ++PSGF I+P
Sbjct: 577 DTLVLQ---EIWNDASG--AMVVYAPVETNPMEWVKRGGNSDSVQLLPSGFSIMP 626


>gi|197116171|dbj|BAG68842.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kamchatica]
          Length = 689

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 137/646 (21%), Positives = 241/646 (37%), Gaps = 136/646 (21%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R+T  Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+R   + +  +
Sbjct: 48  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNKR--NQMKINS 101

Query: 89  SRLQAVNRKLTAMNKLLMEENDR-------------------LQKQVSQLVYENTFFRQQ 129
            RL+ +  +      LL +   R                   +  +V +L+ ENT   ++
Sbjct: 102 DRLENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLIVENTILERE 161

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASP----AGLLSIAEETLTEFLS 185
             N           + +V+  Q    P     +P  +A+P     G     E+  + FL 
Sbjct: 162 I-NQLYSKIPSRPNQMLVSPSQ---PPHCSSSNPGINATPELGLGGGTRTTEKERSMFLD 217

Query: 186 KATGTAVEWVQMPGMK---PGPDSIGIVAISH----------------GCTGVAARACGL 226
            A     E +++  M       DS    A+S                 G    A+R  GL
Sbjct: 218 LAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREIGL 277

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTL 278
           V +    + +   D   W     S+  V     V+PTGS    SG+++ +  +    + L
Sbjct: 278 VPMTCLTLVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVISPL 337

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
            P R    LRY   L  G  VV + + +  QN    P    +  +  LPSG  I     G
Sbjct: 338 VPRRQVTFLRYCKELRHGLWVVVDVTPD--QN----PTLLSYGGSNRLPSGLFIEDMANG 391

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQ-------EVSQ 390
            S +  ++  +     +  + +PL  S   +     +A L RH   +S        E+S 
Sbjct: 392 YSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLAEIS- 450

Query: 391 PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMG 450
           P ++  G   A +  L+QR++  +   +   + + W  ++ +         N +P+  M 
Sbjct: 451 PGLSAKG--AAEVVKLAQRMTLNYYTGITSSSGDKWEKIQVE---------NVAPN--MS 497

Query: 451 VQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEWADSSIDAYSAAAVK 508
             +      P   + +L + A+ +   V    L  FL     R EW   + +      ++
Sbjct: 498 FMIRKNVNEPGEHSGILLSAATSVWFPVNQKTLFAFLSNPSFRHEWDTLTNNTRMEETIR 557

Query: 509 AGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 568
                                +     H   + ++K           I+ +D  +LQ   
Sbjct: 558 ---------------------IQKAKRHGNIISLLK-----------IVGNDTLVLQ--- 582

Query: 569 GVDENAVGNCAELVFAPIDAS---------FSDDAPIIPSGFRIIP 605
            +  +A G  A +V+AP++ +          SD   ++PSGF I+P
Sbjct: 583 EIWNDASG--AMVVYAPVETNPMEWVKRGGNSDSVQLLPSGFSIMP 626


>gi|197116133|dbj|BAG68844.1| homeodomain-containing transcription factor FWA [Arabidopsis
           suecica]
          Length = 689

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 149/689 (21%), Positives = 258/689 (37%), Gaps = 174/689 (25%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           M+  +SG    + D  G +M  ++    R+T  Q++ LE  Y E   P+  +R +L +  
Sbjct: 28  MIDAASG----NNDQDGGRMRRNH----RHTAYQIQELENFYLENSLPTEDQRYELGQRL 79

Query: 61  PILSNIEPKQIKVWFQNRRCREK----------QRKEASRLQAVNRKL-TAM-------- 101
               N+EPKQ+K WFQN+RC+ K           R++  RL     +L +AM        
Sbjct: 80  ----NMEPKQVKFWFQNKRCQMKINSDRLENITLREDHDRLLVTQHQLRSAMLHSLCNIC 135

Query: 102 ------------NKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTS 149
                        ++LM EN +L++++ Q  Y +       Q   + +     C S    
Sbjct: 136 GRATHCGDIDYEMQILMVENAKLEREIDQ--YYSKIRSHPNQMLVSPSQPAPHCSS---- 189

Query: 150 GQHHLTPQQQHQHPPRDASP----AGLLSIAEETLTEFLSKATGTAVEWVQM-----PGM 200
                       +P  +A+P     G     E+  + FL+ A     E +++     P  
Sbjct: 190 -----------SNPGINATPELGLGGGTRATEKERSMFLNLAITALKELIELEAKHCPFG 238

Query: 201 KPGPDSIGIVAISH--------------GCTGVAARACGLVGLDPTRVAEILKDRPSWYR 246
           K    S   V++ +              G    A+R  GLV +    + +   D   W  
Sbjct: 239 KIDSGSSKAVSLIYEKYENASNNVIKPPGHVVEASRDTGLVPMTCLTLVKTFMDTGKWVN 298

Query: 247 DCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSL 298
               +  V     V+PTGS    SG+++L+  +    + L P R    LRY   L  G  
Sbjct: 299 VFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQIISPLVPKRQVTFLRYCKELRQGFW 358

Query: 299 VVCERSLNNTQNGPSMPQAPHFVR---AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 355
           VV + + +         Q P  +    +  LPSG  I     G S +  ++  +     +
Sbjct: 359 VVVDVTPD---------QNPTLLSNGGSNRLPSGLFIEDMANGYSKVTWIEQAEYNESHI 409

Query: 356 PEVLRPLYESSTLIAQKTTMAAL-RHLRQISQ-------EVSQPSVTGWGRRPAALRALS 407
             + +PL  S   +     +A L RH   IS        E+S P ++  G   A +  L+
Sbjct: 410 HPLYQPLIGSGIGLGATRWLATLQRHCDSISTLSSTNLAEIS-PGLSAEG--AAEVVKLA 466

Query: 408 QRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVL 467
           QR++  +   +   +   W  ++   ++DV  ++    S M+   L+     P   + +L
Sbjct: 467 QRMTLNYYSGIMSSSGNKWEKIQ---VEDVAPNL----SFMIRKNLNE----PGEFSGIL 515

Query: 468 CAKASMLLQDVPPAILLRFLRE--HRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQ 525
            + A+ +   V    L  FL     R EW                               
Sbjct: 516 LSAATSVWFPVNQKALFAFLSNPSFRHEWDT----------------------------- 546

Query: 526 VILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAP 585
               L H    EE + + K +   +    +   + + +LQ    +  +A G  A LV+AP
Sbjct: 547 ----LIHNTTMEETIRIQKAKRHGNIISLLKAGNGMLVLQ---EIWNDASG--AMLVYAP 597

Query: 586 IDASF---------SDDAPIIPSGFRIIP 605
           ++ +          SD   ++PSGF I+P
Sbjct: 598 VETNSIEWVKRGGESDHVQLLPSGFSIMP 626


>gi|197116193|dbj|BAG68836.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. gemmifera]
          Length = 689

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 140/655 (21%), Positives = 244/655 (37%), Gaps = 154/655 (23%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R+T  Q + LE +Y E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 48  RHTAYQTQELENVYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 101

Query: 89  SRLQAVNRKLTAMNKLLMEENDRL----------------------------QKQVSQLV 120
            RL+         N +L E++DRL                              +V +L+
Sbjct: 102 DRLE---------NIILREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLI 152

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASP----AGLLSIA 176
            ENT   ++  N           + +V+  Q    P     +P  +A+P     G     
Sbjct: 153 VENTILEREI-NQLYSKIPSRPNQMLVSPSQ---PPHCSSSNPGINATPELGLGGGTRTT 208

Query: 177 EETLTEFLSKATGTAVEWVQMPGMK---PGPDSIGIVAISH----------------GCT 217
           E+  + FL  A     E +++  M       DS    A+S                 G  
Sbjct: 209 EKERSMFLDLAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHV 268

Query: 218 GVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLY 269
             A+R  GLV +    + +   D   W     S+  V     V+PTGS    SG+++ + 
Sbjct: 269 VEASREIGLVPMTCLTLVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQ 328

Query: 270 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSG 329
            +    + L P R    LRY   L  G  VV + + +  QN    P    +  +  LPSG
Sbjct: 329 AEFQVISPLVPKRQVTFLRYCKELRHGLWVVVDVTPD--QN----PTLLSYGGSNRLPSG 382

Query: 330 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQ-- 386
             I     G S +  ++  +     +  + +PL  S   +     +A L RH   +S   
Sbjct: 383 LFIADMANGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLS 442

Query: 387 -----EVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV 441
                E+S P ++  G   A +  L+QR++  +   +   + + W  ++ +         
Sbjct: 443 STNLAEIS-PGLSAKG--AAEVVKLAQRMTLNYYTGITSSSGDKWEKIQIE--------- 490

Query: 442 NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEWADSSI 499
           N +P+  M   +      P   + +L + A+ +   V    L  FL     R EW   + 
Sbjct: 491 NVAPN--MSFMIRKNVNEPGEHSGILLSAATSVWFPVNQKTLFAFLSNPSFRHEWDTLTN 548

Query: 500 DAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           +      ++                     +     H   + ++K           I+ +
Sbjct: 549 NTRMEETIR---------------------IQKAKRHGNIISLLK-----------IVGN 576

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDAS---------FSDDAPIIPSGFRIIP 605
           D  +LQ    +  +A G  A +V+AP++ +          SD   ++PSGF I+P
Sbjct: 577 DTLVLQ---EIWNDASG--AMVVYAPVETNPMEWVKRGGNSDSVQLLPSGFSIMP 626


>gi|218200586|gb|EEC83013.1| hypothetical protein OsI_28071 [Oryza sativa Indica Group]
          Length = 765

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 114/514 (22%), Positives = 207/514 (40%), Gaps = 112/514 (21%)

Query: 208 GIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSG 263
           G+    +G    A+R   +V +  + + EIL D   +     S+        VL TG +G
Sbjct: 323 GLGPKQYGLKSEASRHGAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAG 382

Query: 264 T----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
                ++++ M+   P+ L P R+ + +RY     DG+  V + SL++ +  P       
Sbjct: 383 NYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLRPSPVQ----- 437

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL- 378
             +    PSG LI+    G S +  V+H++++  SV  + +PL  S      K  +  L 
Sbjct: 438 --KCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLD 495

Query: 379 RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
           R   +++  ++     G         GR+  ++  L++R+   F   +       W+ L 
Sbjct: 496 RQCERLASAMASNIPNGDLGVITSVEGRK--SMLKLAERMVASFCGGVTASVAHQWTTLS 553

Query: 431 SDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL 487
             G +DV V    S   P +  G+              VL A  S  L  VPP  +  FL
Sbjct: 554 GSGAEDVRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VPPTAVFDFL 598

Query: 488 REH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGG-QVILPLAHTIEHEEFLEVIK 544
           R+   RSEW     D  S                 N G  Q +  +A+  +H   + +++
Sbjct: 599 RDETSRSEW-----DILS-----------------NGGAVQEMAHIANGRDHGNSVSLLR 636

Query: 545 LENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAP 595
           + +    + +M++     L + C+    +A G  + +V+AP+D             D   
Sbjct: 637 VNSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDIVAMNVVLNGGDPDYVA 685

Query: 596 IIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGN-KASGDSSTQCGSTKSVITIAFQ 654
           ++PSGF I+P                      GP+GN +A+   +       S++T+AFQ
Sbjct: 686 LLPSGFAILP---------------------DGPSGNAQAAVGENGSGSGGGSLLTVAFQ 724

Query: 655 FAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
              +      ++  +   V  +IA +V+R+  A+
Sbjct: 725 ILVDSVPTAKLSLGSVATVNSLIACTVERIKAAV 758



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 14/77 (18%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q           + +R
Sbjct: 103 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQ----------NQHER 148

Query: 86  KEASRLQAVNRKLTAMN 102
            E ++L+A N KL A N
Sbjct: 149 HENAQLRAENDKLRAEN 165


>gi|4455283|emb|CAB36819.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
 gi|7268972|emb|CAB81282.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
          Length = 718

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 126/301 (41%), Gaps = 44/301 (14%)

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYRD-CRSVE---VVNVLPTGSSGT----IE 266
           G    A+R   +V ++   + EIL D   W    C  V     + VL TG +G     ++
Sbjct: 267 GLRSEASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGVAGNYNGALQ 326

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEML 326
           ++  +   P+ L P R+ + +RY     DG   V + SL++ +  P         R+   
Sbjct: 327 VMTAEFQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-------ITRSRRR 379

Query: 327 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQIS 385
           PSG LI+  + G S +  V+H++++  SV  + +PL  +      K  +A L R   +++
Sbjct: 380 PSGCLIQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLA 439

Query: 386 QEVSQ-------PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
             ++          +T    R + L+ L++R+   F   +   T   W+ L + G DDV 
Sbjct: 440 SSMASNIPACDLSVITSPEGRKSMLK-LAERMVMSFCTGVGASTAHAWTTLSTTGSDDVR 498

Query: 439 VHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSE 493
           V    S   P +  G+ LS    F                  V P  +  FLR+   RSE
Sbjct: 499 VMTRKSMDDPGRPPGIVLSAATSF---------------WIPVAPKRVFDFLRDENSRSE 543

Query: 494 W 494
           W
Sbjct: 544 W 544



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 8/98 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE  + ECP P   +R++L RE     ++EP Q+K WFQN+R + K +
Sbjct: 21  RYHRHTQRQIQELESFFKECPHPDDKQRKELSREL----SLEPLQVKFWFQNKRTQMKAQ 76

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
            E       N+ L + N  L  EN+R +  +S     N
Sbjct: 77  HERHE----NQILKSENDKLRAENNRYKDALSNATCPN 110


>gi|356533359|ref|XP_003535232.1| PREDICTED: autophagy-related protein 18-like [Glycine max]
          Length = 207

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 1/68 (1%)

Query: 363 YESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFT 422
           +E+  LI ++  + AL+H+RQI+QE S     G GR+P  L   SQRL RGFN+ +NG+ 
Sbjct: 138 FETHNLI-KELNVKALQHIRQIAQESSGEIEYGGGRQPVVLITFSQRLCRGFNDVVNGYV 196

Query: 423 DEGWSMLE 430
           D+GWS++E
Sbjct: 197 DDGWSLME 204


>gi|22328861|ref|NP_193906.2| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|79325215|ref|NP_001031692.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|75330714|sp|Q8RWU4.1|ATML1_ARATH RecName: Full=Homeobox-leucine zipper protein MERISTEM L1; AltName:
           Full=HD-ZIP protein ATML1; AltName: Full=Homeodomain
           transcription factor ATML1
 gi|20268701|gb|AAM14054.1| putative L1-specific homeobox gene ATML1/ovule-specific homeobox
           protein A20 [Arabidopsis thaliana]
 gi|23297714|gb|AAN12908.1| putative L1-specific homeobox gene ATML1/ovule-specific homeobox
           protein A20 [Arabidopsis thaliana]
 gi|110739777|dbj|BAF01795.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
 gi|332659098|gb|AEE84498.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|332659099|gb|AEE84499.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
          Length = 762

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 130/310 (41%), Gaps = 45/310 (14%)

Query: 203 GPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD-CRSVE---VVNVLP 258
           GP  IG+ +        A+R   +V ++   + EIL D   W    C  V     + VL 
Sbjct: 306 GPKPIGLRS-------EASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLS 358

Query: 259 TGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSM 314
           TG +G     ++++  +   P+ L P R+ + +RY     DG   V + SL++ +  P  
Sbjct: 359 TGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-- 416

Query: 315 PQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTT 374
                  R+   PSG LI+  + G S +  V+H++++  SV  + +PL  +      K  
Sbjct: 417 -----ITRSRRRPSGCLIQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRW 471

Query: 375 MAAL-RHLRQISQEVSQ-------PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW 426
           +A L R   +++  ++          +T    R + L+ L++R+   F   +   T   W
Sbjct: 472 VATLDRQCERLASSMASNIPACDLSVITSPEGRKSMLK-LAERMVMSFCTGVGASTAHAW 530

Query: 427 SMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
           + L + G DDV V    S               P     ++ + A+     V P  +  F
Sbjct: 531 TTLSTTGSDDVRVMTRKSMDD------------PGRPPGIVLSAATSFWIPVAPKRVFDF 578

Query: 487 LREH--RSEW 494
           LR+   RSEW
Sbjct: 579 LRDENSRSEW 588



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 8/93 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ LE  + ECP P   +R++L RE     ++EP Q+K WFQN+R + K +
Sbjct: 65  RYHRHTQRQIQELESFFKECPHPDDKQRKELSREL----SLEPLQVKFWFQNKRTQMKAQ 120

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ 118
            E       N+ L + N  L  EN+R +  +S 
Sbjct: 121 HERHE----NQILKSENDKLRAENNRYKDALSN 149


>gi|224128938|ref|XP_002320458.1| predicted protein [Populus trichocarpa]
 gi|222861231|gb|EEE98773.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 112/514 (21%), Positives = 194/514 (37%), Gaps = 109/514 (21%)

Query: 204 PDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVE----VVNVLPT 259
           P  IG       C   A+R   +V ++   + E L D   W      +      + VL T
Sbjct: 289 PRGIGPKPTGFKCE--ASRESAVVIMNHINLVEYLMDVNQWSTLFSGIVSRALTLEVLST 346

Query: 260 GSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 315
           G +G     ++++  +   PT L P R+ + +RY     DG+  V + SL+N +  P   
Sbjct: 347 GVAGNYNGALQVMTAEFQLPTPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPG-- 404

Query: 316 QAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTM 375
                 R    PSG LI+    G S +  V+H++++   V  + + L  S      K  +
Sbjct: 405 -----ARCRRRPSGCLIQEMLNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWV 459

Query: 376 AAL-RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGW 426
           A L R   +++  ++     G         GR+  ++  L++R+   F   ++  T   W
Sbjct: 460 ATLDRQCERLASAMATNIPAGDVGVITNQEGRK--SMMKLAERMVISFCAGVSASTAHTW 517

Query: 427 SMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
           + L   G DDV V    S               P     ++ + A+     VPP  +  F
Sbjct: 518 TTLSGTGADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDF 565

Query: 487 LREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIK 544
           LR+   R+EW     D  S                    G V+  +AH     +    + 
Sbjct: 566 LRDESTRNEW-----DILS-------------------NGGVVQEMAHIANGRDTGNCVS 601

Query: 545 LENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAP 595
           L  +          S++ +LQ  S  D+ A    + +++AP+D             D   
Sbjct: 602 LLRVNSANSSQ---SNMLILQE-SCADQTA----SFVIYAPVDIVAMNVVLNGGDPDYVA 653

Query: 596 IIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
           ++PSGF ++P  +G                 VG     A G          S++T+AFQ 
Sbjct: 654 LLPSGFAVLPDGTGA---------------HVGGMEEAAGG----------SLLTVAFQI 688

Query: 656 AFEMHLQENVASMARQYVRGIIA-SVQRVALALS 688
             +      ++  +   V  +IA +V+R+  +LS
Sbjct: 689 LVDSVPTAKLSLGSVATVNNLIACTVERIKASLS 722



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 12/99 (12%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D +D   +K      +Y R+T  Q++ +E  + ECP P   +R++L RE      +
Sbjct: 47  GASGDDQDPRPKKK-----RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GL 97

Query: 67  EPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMN 102
           EP Q+K WFQN+R + K   +R E ++L+  N KL A N
Sbjct: 98  EPLQVKFWFQNKRTQMKTQHERHENTQLRNENEKLRADN 136


>gi|222640035|gb|EEE68167.1| hypothetical protein OsJ_26285 [Oryza sativa Japonica Group]
          Length = 577

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 114/508 (22%), Positives = 206/508 (40%), Gaps = 112/508 (22%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----I 265
           +G    A+R   +V +  + + EIL D   +     S+        VL TG +G     +
Sbjct: 141 YGLKSEASRHGAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGAL 200

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +++ M+   P+ L P R+ + +RY     DG+  V + SL++ +  P         +   
Sbjct: 201 QVMSMEFQVPSPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLRPSPVQ-------KCRR 253

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQI 384
            PSG LI+    G S +  V+H++++  SV  + +PL  S      K  +  L R   ++
Sbjct: 254 RPSGCLIQEMPNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERL 313

Query: 385 SQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
           +  ++     G         GR+  ++  L++R+   F   +       W+ L   G +D
Sbjct: 314 ASAMASNIPNGDLGVITSVEGRK--SMLKLAERMVASFCGGVTASVAHQWTTLSGSGAED 371

Query: 437 VTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--R 491
           V V    S   P +  G+              VL A  S  L  VPPA +  FLR+   R
Sbjct: 372 VRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VPPAAVFDFLRDETSR 416

Query: 492 SEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGG-QVILPLAHTIEHEEFLEVIKLENMAH 550
           SEW     D  S                 N G  Q +  +A+  +H   + ++++ +   
Sbjct: 417 SEW-----DILS-----------------NGGAVQEMAHIANGRDHGNSVSLLRVNSANS 454

Query: 551 YREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGF 601
            + +M++     L + C+    +A G  + +V+AP+D             D   ++PSGF
Sbjct: 455 NQSNMLI-----LQESCT----DASG--SYVVYAPVDIVAMNVVLNGGDPDYVALLPSGF 503

Query: 602 RIIPLDSGKDTPSPNRTLDLASALEVGPTGN-KASGDSSTQCGSTKSVITIAFQFAFEMH 660
            I+P                      GP+GN +A+   +       S++T+AFQ   +  
Sbjct: 504 AILP---------------------DGPSGNAQAAVGENGSGSGGGSLLTVAFQILVDSV 542

Query: 661 LQENVASMARQYVRGIIA-SVQRVALAL 687
               ++  +   V  +IA +V+R+  A+
Sbjct: 543 PTAKLSLGSVATVNSLIACTVERIKAAV 570


>gi|413939125|gb|AFW73676.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 735

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 7/95 (7%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           GG        +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WF
Sbjct: 10  GGSDAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWF 65

Query: 76  QNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
           QNRR + K   +R++   L+A N K+   N  + E
Sbjct: 66  QNRRTQMKAQHERQDNCFLRAENDKIRCENIAMQE 100



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 130/309 (42%), Gaps = 55/309 (17%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTGSSGTIELLYMQL 272
            +R  GLV +    + ++  D   W           R+V+V+     G S ++ L+Y +L
Sbjct: 297 GSRETGLVFMSAIGLVDMFMDSSKWTELFPAIVSKARTVDVLVNGMGGRSESLLLMYEEL 356

Query: 273 YAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLI 332
           +  + + P R+F  LRY   +E G   + + S++  Q        P   R+  LPSG LI
Sbjct: 357 HVMSPVVPTREFCFLRYCRQIEHGLWAIADISVDQQQRDARFGAPPS--RSCRLPSGCLI 414

Query: 333 RPCEGGGSIIHIVDHMDLEPWSVPEVL--RPLYESSTLIAQKTTMAALRHL--------- 381
                G S +  V+HM++E   VP  L  R L  S         +AAL+           
Sbjct: 415 ADMADGSSKVTWVEHMEIED-RVPIHLLYRDLVLSGAAFGAHRWLAALQRACERCACLAT 473

Query: 382 ------RQISQ--EVSQP---SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
                 R I+   ++S     +VT  G+R  ++  LSQR+   F  +L+      W+ L 
Sbjct: 474 AGIMPHRDIAAAGDISHRELLAVTPEGKR--SMMKLSQRMVNSFCASLSASQLHRWTTLS 531

Query: 431 SDGIDD----VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
             G +D    V VH ++ P +  GV LS      S+   V C +A   ++D         
Sbjct: 532 --GPNDVGVRVMVHRSTDPGQPSGVVLSAAT---SIWLPVPCDRAFAFVRD--------- 577

Query: 487 LREH-RSEW 494
             EH RS+W
Sbjct: 578 --EHTRSQW 584


>gi|242072556|ref|XP_002446214.1| hypothetical protein SORBIDRAFT_06g004510 [Sorghum bicolor]
 gi|241937397|gb|EES10542.1| hypothetical protein SORBIDRAFT_06g004510 [Sorghum bicolor]
          Length = 735

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 149/725 (20%), Positives = 281/725 (38%), Gaps = 161/725 (22%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R+   Q++ LE  +  C  P+   RQ+L  +      +E +Q+K WFQNRR + K   + 
Sbjct: 52  RFAMHQIQELEAQFRVCSHPNPDVRQELATKI----GLEERQVKFWFQNRRSQMKASLDL 107

Query: 89  SRLQAVNRKL-----TAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTD--- 140
           + +  +  +L      ++ K   ++N  +++++++L  EN   +Q+ QN      T+   
Sbjct: 108 TTILILLCRLFWLLCLSLVKAYGDDNKGIRQELAKLKAENEELKQRRQNPICFMCTNPIA 167

Query: 141 ---------------------------------TSCE---SVVTSGQHHLTPQQQHQHP- 163
                                             + E   S + S  HHL     +  P 
Sbjct: 168 AIQSENWRLLNDNTRLKDEYVRSKAHMDRLIREAAAEHPPSAMRSSDHHLASAHMNMDPV 227

Query: 164 -------PRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGC 216
                        A L S A   + EF+  AT     WV     +       I+    G 
Sbjct: 228 ALTGNCRTTTNLEATLTSHAARAMKEFVMLATKGEPMWVLAKDGEKLNHQEYILQTFPGL 287

Query: 217 TGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPT 276
            G+  +  G V  + TR  +++K          ++++V++L        +++ ++L+  +
Sbjct: 288 LGLCPQ--GFVE-EATRETDMIKGT--------AMDLVSIL-------TDVMNVELWVQS 329

Query: 277 TLAPARDFWLLRYTSVLEDGSLVVCERSLNNT----QNGPSMPQAPHFVRAEMLPSGYLI 332
                R    LR++ ++ +G   V + S++      Q G S     +     +LPSG L+
Sbjct: 330 PRLLNRSVKFLRFSKMMANGRWAVVDVSVDGIYGVEQEGSS---TSYTTGCRLLPSGCLL 386

Query: 333 RPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPS 392
               GG   +  V H + +  +VP + RPL +S         + A R LR + ++    +
Sbjct: 387 EDMSGGYCKVTWVVHAEYDETTVPFLFRPLLQSG------QALGACRWLRSLQKQCEYIT 440

Query: 393 V------------------TGWGRRPAALRALSQRLSRGFNEALNG-------FTDEGWS 427
           V                   G GRR  ++  L+ ++   F  A++G        +   W 
Sbjct: 441 VLPSSHVLPSSSSSSAISTLGVGRR--SVMELAGQMMVSFYAAVSGPVIVPATSSVNEWR 498

Query: 428 MLES-DGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRF 486
           ++ + +G + V   V         +    + G PS++  VL A  ++ L   PP  +  +
Sbjct: 499 LVSNGNGTERVEAFVRLVTWNCADI----MPGEPSVT--VLSATTTVWLPGTPPLCVFEY 552

Query: 487 L--REHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIK 544
           L   + R EW D+ +DA     + +   S  +P  GN    V+ P     +  E  +V+ 
Sbjct: 553 LCDLQRRGEW-DTHVDAGEVKELSSVATSPQLP--GNNVVSVLEPTTVVTDETESSKVLI 609

Query: 545 LENMAHYREDMIMPSDI-FLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRI 603
           L+  +         +D+   L + S ++E+       L+   +D     +  ++PSGF I
Sbjct: 610 LQETS---------TDVSCFLVVYSLIEES-------LMRGIMDGRERSNIFVLPSGFAI 653

Query: 604 IPLDSGK---DTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMH 660
           +P   GK   D  + N             + N A  DS     +  S++++AFQ     +
Sbjct: 654 LPDGHGKAHADHTAAN-------------SSNSAPIDSRNN--NAGSIVSVAFQTLLPGN 698

Query: 661 LQENV 665
           L  N+
Sbjct: 699 LSSNL 703


>gi|15237948|ref|NP_197234.1| homeobox-leucine zipper protein HDG9 [Arabidopsis thaliana]
 gi|75309030|sp|Q9FFI0.1|HDG9_ARATH RecName: Full=Homeobox-leucine zipper protein HDG9; AltName:
           Full=HD-ZIP protein HDG9; AltName: Full=Homeodomain
           GLABRA 2-like protein 9; AltName: Full=Homeodomain
           transcription factor HDG9; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 9
 gi|10177077|dbj|BAB10519.1| homeobox protein [Arabidopsis thaliana]
 gi|332005030|gb|AED92413.1| homeobox-leucine zipper protein HDG9 [Arabidopsis thaliana]
          Length = 718

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 122/561 (21%), Positives = 211/561 (37%), Gaps = 114/561 (20%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T EQ+  LE  + ECP P   +R+ L  E     N++PKQIK WFQN+R + K   
Sbjct: 30  YHRHTNEQIHRLETYFKECPHPDEFQRRLLGEEL----NLKPKQIKFWFQNKRTQAKSHN 85

Query: 84  ---------------QRKEASRLQAVN---------------------RKLTAMNKLLME 107
                          +R+  S   A+N                     +KL A N  L +
Sbjct: 86  EKADNAALRAENIKIRRENESMEDALNNVVCPPCGGRGPGREDQLRHLQKLRAQNAYLKD 145

Query: 108 ENDRLQKQVSQL-------VYENTFFRQQTQNAATL----ATTDTSCESV---------- 146
           E +R+   + Q        V    +    + +A+T     A   TS   +          
Sbjct: 146 EYERVSNYLKQYGGHSMHNVEATPYLHGPSNHASTSKNRPALYGTSSNRLPEPSSIFRGP 205

Query: 147 VTSGQHHLT--PQ------QQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
            T G  + T  PQ       Q+  P        +L  AE+ ++E LS        W +  
Sbjct: 206 YTRGNMNTTAPPQPRKPLEMQNFQPLSQLEKIAMLEAAEKAVSEVLSLIQMDDTMWKKSS 265

Query: 199 -----GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYR------- 246
                 + PG         +      +++   +V +D   + +I      W R       
Sbjct: 266 IDDRLVIDPGLYEKYFTKTNTNGRPESSKDVVVVQMDAGNLIDIFLTAEKWARLFPTIVN 325

Query: 247 DCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN 306
           + +++ V++ +         ++Y QL+  + L P R+F +LR    +ED   ++ + S  
Sbjct: 326 EAKTIHVLDSVDHRGKTFSRVIYEQLHILSPLVPPREFMILRTCQQIEDNVWMIADVSC- 384

Query: 307 NTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV-PEVLRP--LY 363
              + P++     F      PSG LI+    G S +  ++H+ +    V P  L    LY
Sbjct: 385 ---HLPNIEFDLSFPICTKRPSGVLIQALPHGFSKVTWIEHVVVNDNRVRPHKLYRDLLY 441

Query: 364 ESSTLIAQKTTMAALRHLRQISQEVS--------QPSVTGWGRRPAALRALSQRLSRGFN 415
                 A++ T+   R   ++    S         P V    R   ++  L +R+ R F 
Sbjct: 442 GGFGYGARRWTVTLERTCERLIFSTSVPALPNNDNPGVVQTIRGRNSVMHLGERMLRNF- 500

Query: 416 EALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLL 475
                     W M   + +D       ++    +GV+++   G P     ++CA +S+ L
Sbjct: 501 ---------AWMMKMVNKLDFSPQSETNNSGIRIGVRINNEAGQP--PGLIVCAGSSLSL 549

Query: 476 QDVPPAILLRFLR--EHRSEW 494
             +PP  +  FL+  E R +W
Sbjct: 550 P-LPPVQVYDFLKNLEVRHQW 569


>gi|242063218|ref|XP_002452898.1| hypothetical protein SORBIDRAFT_04g034580 [Sorghum bicolor]
 gi|241932729|gb|EES05874.1| hypothetical protein SORBIDRAFT_04g034580 [Sorghum bicolor]
          Length = 707

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 7/95 (7%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           GG        +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WF
Sbjct: 10  GGSDAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWF 65

Query: 76  QNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
           QNRR + K   +R++   L+A N K+   N  + E
Sbjct: 66  QNRRTQMKAQHERQDNCFLRAENDKIRCENIAMRE 100



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 128/288 (44%), Gaps = 37/288 (12%)

Query: 223 ACGLVGL--DPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP 280
           A GLV +  D ++  E     P+     R+++V+     G S ++ L+Y +L+  + + P
Sbjct: 283 AIGLVDMFMDSSKFTEFF---PAIVSKARTMDVLVNGMAGRSDSLVLMYEELHMMSPVVP 339

Query: 281 ARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGS 340
            R+F  LRY   +E G   + + S++  Q        P   R+  LPSG LI     G S
Sbjct: 340 TREFCFLRYCRQIEHGLWAIADISVDLQQRDARFGAPPS--RSCRLPSGCLIADMADGSS 397

Query: 341 IIHIVDHMDLEPWSVPEVL--RPLYESSTLIAQKTTMAALRHLRQIS----------QEV 388
            +  V+HM++E   VP  L  R L  S         +AAL+   +            +++
Sbjct: 398 KVTWVEHMEIED-RVPIHLLYRDLILSGAAFGAHRWLAALQRACERCACLATAGMPHRDI 456

Query: 389 SQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKM 448
           +   VT  G+R  ++  LSQR+   F  +L+      W+ L   G +DV V V       
Sbjct: 457 AAAGVTPEGKR--SMMKLSQRMVSSFCASLSASQLHRWTTLS--GPNDVGVRVM------ 506

Query: 449 MGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR-EH-RSEW 494
             V  S   G P  S  VL A  S+ L  VP   +  F+R EH RS+W
Sbjct: 507 --VHRSTDPGQP--SGVVLSAATSIWLP-VPCDRVFAFVRDEHTRSQW 549


>gi|356568318|ref|XP_003552359.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 822

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 108/505 (21%), Positives = 199/505 (39%), Gaps = 105/505 (20%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSW--------YRDCRSVEVVNVLPTGSSGTI 265
           +G    A+R  G+V ++   + E L D   W         R   +  + N +    +G +
Sbjct: 388 NGFVTEASRQTGMVIINSLALVETLMDSNRWSEMFPCMIARTSTAEVISNGINGTRNGAL 447

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +L++ +L   + L P R+   LR+     +G   V + S++  +       AP FV    
Sbjct: 448 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSIDTIRETSG---APTFVNCRR 504

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYES----------STLIAQKTTM 375
           LPSG +++    G S +  V+H + +   + ++ RPL  S          +TL  Q   +
Sbjct: 505 LPSGCVVQDMPNGYSKVTWVEHAEYDESQIHQLFRPLLSSGMGFGAQRWVTTLQRQCECL 564

Query: 376 AALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI- 434
           A L      S+E S  +++  GRR  ++  L+ R++  F   +   T   W+ L +  + 
Sbjct: 565 AILMSSAAPSREHS--AISSGGRR--SMLKLAHRMTNNFCSGVCASTVHKWNKLNAGNVG 620

Query: 435 DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RS 492
           +DV V    S               P     ++ + A+ +   V    L  FLR+   RS
Sbjct: 621 EDVRVMTRKSVDD------------PGEPPGIVLSAATSVWLPVSSQRLFDFLRDERLRS 668

Query: 493 EWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYR 552
           EW     D  S      GP             Q +  +A   +H   + +++   +   +
Sbjct: 669 EW-----DILS----NGGPM------------QEMAHIAKGQDHANCVSLLRASAINANQ 707

Query: 553 EDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------ASFSDDA--PIIPSGFRI 603
             M++     L + C+    + V      V+AP+D        +  D A   ++PSGF I
Sbjct: 708 SSMLI-----LQETCTDASGSLV------VYAPVDIPAMHVVMNGGDSAYVALLPSGFAI 756

Query: 604 IPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQE 663
           +P  SG++                        G +S Q  ++  ++T+AFQ         
Sbjct: 757 VPDGSGEE-----------------------QGGASQQRAASGCLLTVAFQILVNSLPTA 793

Query: 664 NVASMARQYVRGIIA-SVQRVALAL 687
            +   + + V  +I+ +VQ++  AL
Sbjct: 794 KLTVESVETVNNLISCTVQKIKSAL 818



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 17/108 (15%)

Query: 7   GGSRDSRDSGGQKMIMDN----GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           GGS D  D+       DN     +Y R+TP+Q++ LE L+ ECP P   +R +L R    
Sbjct: 110 GGSGDDFDAA------DNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSRRL-- 161

Query: 63  LSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
             N+E +Q+K WFQNRR + K   +R E S L+  N KL A N  + E
Sbjct: 162 --NLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSMRE 207


>gi|356532068|ref|XP_003534596.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 820

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 108/505 (21%), Positives = 198/505 (39%), Gaps = 104/505 (20%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSW--------YRDCRSVEVVNVLPTGSSGTI 265
           +G    A+R  G+V ++   + E L D   W         R   +  + N +    +G +
Sbjct: 385 NGFVTEASRQTGMVIINSLALVETLMDSNRWSEMFPCMIARTSTAEVISNGINGTRNGAL 444

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +L++ +L   + L P R+   LR+     +G   V + S++  ++      AP FV    
Sbjct: 445 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSIDTIRDTSG---APTFVNCRR 501

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-- 383
           LPSG +++    G S +  V+H + +   + ++ RPL  S      +  +A L+  RQ  
Sbjct: 502 LPSGCVVQDMPNGYSKVTWVEHAEYDESQIHQLYRPLLSSGMGFGAQRWVATLQ--RQCE 559

Query: 384 -----ISQEV---SQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI- 434
                IS  V      +++  GRR  ++  L+QR++  F   +   T   W+ L +  + 
Sbjct: 560 CLAILISSAVPSREHSAISSGGRR--SMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVG 617

Query: 435 DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RS 492
           +DV V    S               P     ++ + A+ +   V P  L  FLR+   RS
Sbjct: 618 EDVRVMTRKSVDD------------PGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRS 665

Query: 493 EWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYR 552
           EW     D  S      GP             Q +  +A   +H   + +++   +   +
Sbjct: 666 EW-----DILS----NGGPM------------QEMAHIAKGQDHANCVSLLRASAINANQ 704

Query: 553 EDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------ASFSDDA--PIIPSGFRI 603
             M++     L + C+    + V      V+AP+D        +  D A   ++PSGF I
Sbjct: 705 SSMLI-----LQETCTDASGSLV------VYAPVDIPAMHVVMNGGDSAYVALLPSGFAI 753

Query: 604 IPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQE 663
           +P  S ++                        G S  +  S   ++T+AFQ         
Sbjct: 754 VPDGSVEEN----------------------GGASQQRAASGGCLLTVAFQILVNSLPTA 791

Query: 664 NVASMARQYVRGIIA-SVQRVALAL 687
            +   + + V  +I+ +VQ++  AL
Sbjct: 792 KLTVESVETVNNLISCTVQKIKSAL 816



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 17/108 (15%)

Query: 7   GGSRDSRDSGGQKMIMDN----GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           GGS D  D+       DN     +Y R+TP+Q++ LE L+ ECP P   +R +L R    
Sbjct: 104 GGSGDDFDAA------DNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSRRL-- 155

Query: 63  LSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
             N+E +Q+K WFQNRR + K   +R E S L+  N KL A N  + E
Sbjct: 156 --NLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSMRE 201


>gi|357159535|ref|XP_003578477.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 3
           [Brachypodium distachyon]
          Length = 858

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 8/105 (7%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D  D           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+
Sbjct: 103 GASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NL 158

Query: 67  EPKQIKVWFQNRRCREKQ----RKEASRLQAVNRKLTAMNKLLME 107
           E +Q+K WFQNRR + KQ    R E + L+  N KL A N  + E
Sbjct: 159 ESRQVKFWFQNRRTQMKQTQIERHENALLRQENDKLRAENMTIRE 203



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 110/487 (22%), Positives = 186/487 (38%), Gaps = 82/487 (16%)

Query: 212 ISHGCTGVAARACGLVGLDPTRVAEI---LKDRPSWY--------RDCRSVEVVNVLPTG 260
           ++H   G  + A   VGL     AE+   L D   W         R   +  +   +P  
Sbjct: 370 LAHSPAGFVSEATREVGLAIVSSAELVDSLMDAARWAEMFPCVVARASTTDIISGGMPGT 429

Query: 261 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT---QNGPSMPQA 317
            SG+I+L++ +L   + L P R+   LR+     +G   V + S +       G     A
Sbjct: 430 RSGSIQLMHAELQVLSPLVPIREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAA 489

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
             ++   +LPSG ++     G + +  V H + +  +V  + RPL  S   +  +  +A+
Sbjct: 490 AGYMGCRLLPSGCVVEDMRNGYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLAS 549

Query: 378 LRHLRQ---ISQEVSQPSVTGWGRRPAALRA---LSQRLSRGFNEALNGFTDEGWSMLES 431
           L+   Q   I +  S PS       P   R+   L+QR++  F   +     + W  L+ 
Sbjct: 550 LQRQCQYLAILRNNSLPSQDNQAISPVGRRSMLKLAQRMADNFCAGVCATAAQKWRRLDE 609

Query: 432 -------DGIDDVTVHV-----NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
                   G  D   H           +MM        G P     VL A  S+ L   P
Sbjct: 610 WRVEGAMPGGGDQQQHQAGGGDGDKEVRMMARHSVGAPGEP--PGVVLSATTSVRLPGTP 667

Query: 480 PAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHE 537
           P  +  +LR+   R EW    I A   A                   Q +  +A    H 
Sbjct: 668 PQRVFDYLRDEQRRGEW---DILANGEAM------------------QEMDHIAKGQLHG 706

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDA-------SF 590
             + +++    +  + +M++     L + C+    + V      V+AP+D        + 
Sbjct: 707 NAVSLLRPNATSGNQNNMLI-----LQETCTDSSGSLV------VYAPVDVQSMHIVMNG 755

Query: 591 SDDA--PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSV 648
            D A   ++PSGF I+P   G +TP P   +D A + +    G+  S        +T S+
Sbjct: 756 GDSAYVSLLPSGFAILP--DGHNTP-PGAVVDPAGSSQQSQQGSSESAAHGNN--NTGSL 810

Query: 649 ITIAFQF 655
           +T+AFQ 
Sbjct: 811 VTVAFQI 817


>gi|345193175|tpg|DAA34953.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414867891|tpg|DAA46448.1| TPA: outer cell layer4 isoform 1 [Zea mays]
 gi|414867892|tpg|DAA46449.1| TPA: outer cell layer4 isoform 2 [Zea mays]
          Length = 884

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 11/109 (10%)

Query: 18  QKMIMDNGK---YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           Q++   NGK   Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K W
Sbjct: 131 QQLATANGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFW 186

Query: 75  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           FQNRR + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 187 FQNRRTQMKAQQD----RADNVLLRAENESLKSDNYRLQAAIRNVVCPN 231



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 18/242 (7%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVN-VLPTGSSGTIELLYMQ--LYAPTTLAPARDFW 285
           LD  +  E+    PS     R+++++N    +G  G+  LL MQ  L  P+ L PAR+  
Sbjct: 444 LDANKWMELF---PSIVSKARTIQIINHGAASGHMGSGSLLLMQAELQFPSPLVPAREVV 500

Query: 286 LLRY-TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHI 344
             RY     ++G+  + +      Q      Q P  VR    PSG +I+    G S +  
Sbjct: 501 FFRYCVHNGDEGTWSLVDFPAEGFQ--LEALQTPSVVRCCRRPSGCIIQDMPNGYSSVVW 558

Query: 345 VDHMDL--EPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQP-SVTGWGRRP 400
           V+H ++  E   + +V +    S +       ++ L R   +++ E+++  +  G  R P
Sbjct: 559 VEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLLQRQCERLASELARNIADLGVIRTP 618

Query: 401 AA---LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD--VTVHVNSSPSKMMGVQLSY 455
            A   +  LSQR+   F+  ++    + W+ L     D   VT   N+ P +  GV L+ 
Sbjct: 619 EARTNMMKLSQRMITSFSANISASGSQSWTSLSETTEDTIRVTTRKNTDPGQPSGVILTA 678

Query: 456 VN 457
           V+
Sbjct: 679 VS 680


>gi|190349991|emb|CAQ63376.1| putative HD-ZIP IV family transcription factor OCL4 [Zea mays]
          Length = 884

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 11/109 (10%)

Query: 18  QKMIMDNGK---YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           Q++   NGK   Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K W
Sbjct: 131 QQLATANGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFW 186

Query: 75  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           FQNRR + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 187 FQNRRTQMKAQQD----RADNVLLRAENESLKSDNYRLQAAIRNVVCPN 231



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 18/242 (7%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVN-VLPTGSSGTIELLYMQ--LYAPTTLAPARDFW 285
           LD  +  E+    PS     R+++V+N    +G  G+  LL MQ  L  P+ L PAR+  
Sbjct: 444 LDANKWMELF---PSILSKARTIQVINHGSASGHMGSGSLLLMQAELQFPSPLVPAREVV 500

Query: 286 LLRY-TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHI 344
             RY     ++G+  + +      Q      Q P  VR    PSG +I+    G S +  
Sbjct: 501 FFRYCVHNGDEGTWSIVDFPAEGFQ--LEALQTPSVVRCCRRPSGCIIQDMPNGYSSVVW 558

Query: 345 VDHMDL--EPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQP-SVTGWGRRP 400
           V+H ++  E   + +V +    S +       ++ L R   +++ E+++  +  G  R P
Sbjct: 559 VEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLLQRQCERLASELARNIADLGVIRTP 618

Query: 401 AA---LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD--VTVHVNSSPSKMMGVQLSY 455
            A   +  LSQR+   F+  ++    + W+ L     D   VT   N+ P +  GV L+ 
Sbjct: 619 EARTNMMKLSQRMITSFSANISASGSQSWTSLSETTEDTIRVTTRKNTDPGQPSGVILTA 678

Query: 456 VN 457
           V+
Sbjct: 679 VS 680


>gi|190349989|emb|CAQ63375.1| putative HD-ZIP IV family transcription factor OCL4 [Zea mays]
          Length = 881

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 11/109 (10%)

Query: 18  QKMIMDNGK---YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           Q++   NGK   Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K W
Sbjct: 131 QQLATANGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFW 186

Query: 75  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           FQNRR + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 187 FQNRRTQMKAQQD----RADNVLLRAENESLKSDNYRLQAAIRNVVCPN 231



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 18/242 (7%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVN-VLPTGSSGTIELLYMQ--LYAPTTLAPARDFW 285
           LD  +  E+    PS     R+++V+N    +G  G+  LL MQ  L  P+ L PAR+  
Sbjct: 444 LDANKWMELF---PSILSKARTIQVINHGSASGHMGSGSLLLMQAELQFPSPLVPAREVV 500

Query: 286 LLRY-TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHI 344
             RY     ++G+  + +      Q      Q P  VR    PSG +I+    G S +  
Sbjct: 501 FFRYCVHNGDEGTWSIVDFPAEGFQ--LEALQTPSVVRCCRRPSGCIIQDMPNGYSSVVW 558

Query: 345 VDHMDL--EPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQP-SVTGWGRRP 400
           V+H ++  E   + +V +    S +       ++ L R   +++ E+++  +  G  R P
Sbjct: 559 VEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLLQRQCERLASELARNIADLGVIRTP 618

Query: 401 AA---LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD--VTVHVNSSPSKMMGVQLSY 455
            A   +  LSQR+   F+  ++    + W+ L     D   VT   N+ P +  GV L+ 
Sbjct: 619 EARTNMMKLSQRMITSFSANISASGSQSWTSLSETTEDTIRVTTRKNTDPGQPSGVILTA 678

Query: 456 VN 457
           V+
Sbjct: 679 VS 680


>gi|187611422|sp|Q7Y0V7.2|ROC6_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC6; AltName:
           Full=GLABRA 2-like homeobox protein 6; AltName:
           Full=HD-ZIP protein ROC6; AltName: Full=Homeodomain
           transcription factor ROC6; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 6
          Length = 872

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 21/148 (14%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D  D           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+
Sbjct: 106 GASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NL 161

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF 126
           E +Q+K WFQNRR + KQ +       + R     N LL +END+L+        EN   
Sbjct: 162 ESRQVKFWFQNRRTQMKQTQ-------IERH---ENALLRQENDKLRA-------ENMTI 204

Query: 127 RQQTQNAATLATTDTSCESVVTSGQHHL 154
           R+  +N    +    +    V+  + HL
Sbjct: 205 REAMRNPMCASCGGAAVLGEVSLEEQHL 232



 Score = 47.4 bits (111), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 22/236 (9%)

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIE 266
           G    A R  G+  +    + + L D P W      V       +++ +G     SG+I+
Sbjct: 399 GYVSEATRESGIAIISSVDLVDSLMDAPRWSEMFPCVVARASTTDIISSGMGGTRSGSIQ 458

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDG----SLVVCERSLNNTQNGPSMPQAPHFVR 322
           L++ +L   + L P R+   LR+     +G      V  +  L   QNG     +  ++ 
Sbjct: 459 LMHAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGGGGSSSSSYMG 518

Query: 323 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLR 382
             +LP+G +++    G S +  V H + +  +  ++ RPL  S   +  +  +A+L+   
Sbjct: 519 CRLLPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGARRWLASLQRQC 578

Query: 383 Q---ISQEVSQP-----SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
           Q   I    S P     ++T  GRR  ++  L+QR++  F   +     + W  L+
Sbjct: 579 QYLAILCSNSLPARDHAAITPVGRR--SMLKLAQRMTDNFCAGVCASAAQKWRRLD 632


>gi|110430672|gb|ABG73462.1| homeodomain transcription factor [Oryza brachyantha]
          Length = 844

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 22/148 (14%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D  D           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+
Sbjct: 110 GASGDDLDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NL 165

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF 126
           E +Q+K WFQNRR + K + E              N LL +END+L+        EN   
Sbjct: 166 ESRQVKFWFQNRRTQMKTQIERHE-----------NALLRQENDKLRA-------ENMTI 207

Query: 127 RQQTQNAATLATTDTSCESVVTSGQHHL 154
           R+  +N    +    +    V+  + HL
Sbjct: 208 REAMRNPMCASCGGAAVLGEVSLEEQHL 235



 Score = 39.3 bits (90), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 75/175 (42%), Gaps = 15/175 (8%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIELLYMQ 271
           A R  G+  +    + + L D P W      +       +++ +G     SG+I+L++ +
Sbjct: 402 ATRESGIAIISSVDLVDSLMDAPRWSEMFPCIVARASTTDIISSGMGGTRSGSIQLMHAE 461

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDG-------SLVVCERSLNNTQNGPSMPQAPHFVRAE 324
           L   + L P R+   LR+     +G       S+    R   N   G  +  +  ++   
Sbjct: 462 LQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGGGGGGVSSSSSYMGCR 521

Query: 325 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR 379
           +LP+G +++    G S +  V H   +  +V ++ RPL  S   +  +  +A+L+
Sbjct: 522 LLPTGCIVQDMNNGYSKVTWVVHAAYDETAVHQLYRPLLRSGQALGARRWLASLQ 576


>gi|115447877|ref|NP_001047718.1| Os02g0674800 [Oryza sativa Japonica Group]
 gi|75121322|sp|Q6EPF0.1|ROC5_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC5; AltName:
           Full=GLABRA 2-like homeobox protein 5; AltName:
           Full=HD-ZIP protein ROC5; AltName: Full=Homeodomain
           transcription factor ROC5; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 5
 gi|50253214|dbj|BAD29470.1| GL2-type homeobox genes [Oryza sativa Japonica Group]
 gi|113537249|dbj|BAF09632.1| Os02g0674800 [Oryza sativa Japonica Group]
 gi|222623431|gb|EEE57563.1| hypothetical protein OsJ_07908 [Oryza sativa Japonica Group]
          Length = 804

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 7/108 (6%)

Query: 3   AVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           A+S+ G  D  D+          +Y R+TP+Q++ LE L+ ECP P   +R +L R    
Sbjct: 78  AISAAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL-- 135

Query: 63  LSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
             +++ +Q+K WFQNRR + K   +R E + L+  N KL A N  + E
Sbjct: 136 --SLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIRE 181



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 118/523 (22%), Positives = 201/523 (38%), Gaps = 117/523 (22%)

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPT-RVAEILKDRPSW-------YRDCRS 250
           GMKP            G    A+R  GLV +D +  + E L D   W             
Sbjct: 361 GMKPA-----------GYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATV 409

Query: 251 VEVVNVLPTGS-SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN-- 307
           +E V+    GS +G + L+  +L   + L P R+   LR+   L +G+  V + S++   
Sbjct: 410 LEEVSTGIAGSRNGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLV 469

Query: 308 -TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS 366
              N  + P   + V+   +PSG +++    G   +  V+H + +  SV ++ RPL  S 
Sbjct: 470 RDHNSGTAPTGGN-VKCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSG 528

Query: 367 TLIAQKTTMAAL-RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEA 417
                +  +A L R    ++  +S  +VT          G+R  ++  L++R++  F   
Sbjct: 529 LAFGARRWLATLQRQCECLAILMSSATVTANDSTAISQEGKR--SMLKLARRMTENFCAG 586

Query: 418 LNGFTDEGWSMLESDGI-----DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKAS 472
           ++  +   WS L  DG      +DV V    S S+            P     V+ + A+
Sbjct: 587 VSASSAREWSKL--DGATGSIGEDVRVMARKSVSE------------PGEPPGVVLSAAT 632

Query: 473 MLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCS--LPVPRAGNFGGQVIL 528
            +   V P  L  FLR+   R+EW     D  S      GP      + +    G  V L
Sbjct: 633 SVWVPVAPEKLFNFLRDEQLRAEW-----DILS----NGGPMQEMTQIAKGQRDGNSVSL 683

Query: 529 PLAHTIEHEEFLEVIKLENMAHYREDMIM--PSDIFLLQLC-SGVDENAVGNCAELVFAP 585
             A  +   +   +I  E        +++  P DI  +QL  +G D   V          
Sbjct: 684 LRASAVSANQSSMLILQETCTDASGSIVVYAPVDIPAMQLVMNGGDSTYVA--------- 734

Query: 586 IDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGST 645
                     ++PSGF I+P     D P             +G TG +  G         
Sbjct: 735 ----------LLPSGFAILP-----DGP------------RIGATGYETGG--------- 758

Query: 646 KSVITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
            S++T+AFQ          +   + + V  +I+ +++++  AL
Sbjct: 759 -SLLTVAFQILVNNQPTAKLTVESVETVNNLISCTIKKIKTAL 800


>gi|218191344|gb|EEC73771.1| hypothetical protein OsI_08446 [Oryza sativa Indica Group]
          Length = 804

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 7/108 (6%)

Query: 3   AVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           A+S+ G  D  D+          +Y R+TP+Q++ LE L+ ECP P   +R +L R    
Sbjct: 78  AISAAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL-- 135

Query: 63  LSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
             +++ +Q+K WFQNRR + K   +R E + L+  N KL A N  + E
Sbjct: 136 --SLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIRE 181



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 118/523 (22%), Positives = 201/523 (38%), Gaps = 117/523 (22%)

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPT-RVAEILKDRPSW-------YRDCRS 250
           GMKP            G    A+R  GLV +D +  + E L D   W             
Sbjct: 361 GMKPA-----------GYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATV 409

Query: 251 VEVVNVLPTGS-SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN-- 307
           +E V+    GS +G + L+  +L   + L P R+   LR+   L +G+  V + S++   
Sbjct: 410 LEEVSTGIAGSRNGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLV 469

Query: 308 -TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS 366
              N  + P   + V+   +PSG +++    G   +  V+H + +  SV ++ RPL  S 
Sbjct: 470 RDHNSGTAPTGGN-VKCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSG 528

Query: 367 TLIAQKTTMAAL-RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEA 417
                +  +A L R    ++  +S  +VT          G+R  ++  L++R++  F   
Sbjct: 529 LAFGARRWLATLQRQCECLAILMSSATVTANDSTAISQEGKR--SMLKLARRMTENFCAG 586

Query: 418 LNGFTDEGWSMLESDGI-----DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKAS 472
           ++  +   WS L  DG      +DV V    S S+            P     V+ + A+
Sbjct: 587 VSASSAREWSKL--DGATGSIGEDVRVMARKSVSE------------PGEPPGVVLSAAT 632

Query: 473 MLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCS--LPVPRAGNFGGQVIL 528
            +   V P  L  FLR+   R+EW     D  S      GP      + +    G  V L
Sbjct: 633 SVWVPVAPEKLFNFLRDEQLRAEW-----DILS----NGGPMQEMTQIAKGQRDGNSVSL 683

Query: 529 PLAHTIEHEEFLEVIKLENMAHYREDMIM--PSDIFLLQLC-SGVDENAVGNCAELVFAP 585
             A  +   +   +I  E        +++  P DI  +QL  +G D   V          
Sbjct: 684 LRASAVSANQSSMLILQETCTDASGSIVVYAPVDIPAMQLVMNGGDSTYVA--------- 734

Query: 586 IDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGST 645
                     ++PSGF I+P     D P             +G TG +  G         
Sbjct: 735 ----------LLPSGFAILP-----DGP------------RIGATGYETGG--------- 758

Query: 646 KSVITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
            S++T+AFQ          +   + + V  +I+ +++++  AL
Sbjct: 759 -SLLTVAFQILVNNQPTAKLTVESVETVNNLISCTIKKIKTAL 800


>gi|197116199|dbj|BAG68839.1| homeodomain-containing transcription factor FWA [Arabidopsis
           arenosa]
          Length = 689

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 143/661 (21%), Positives = 245/661 (37%), Gaps = 166/661 (25%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 83
           R+T  Q + LE  Y E   P+  +R +L +      N+EPKQ+K WFQN+RC+ K     
Sbjct: 48  RHTAYQTQELENFYLENSLPTEDQRYELGQRL----NMEPKQVKFWFQNKRCQMKINSDR 103

Query: 84  -----QRKEASRLQAVNRKL-TAM--------------------NKLLMEENDRLQKQVS 117
                 R++  RL     +L +AM                     ++LM EN +L++++ 
Sbjct: 104 LENITLREDHDRLLVTQHQLRSAMLQSSCNICGRATHCGDIDYEVQILMVENAKLEREID 163

Query: 118 QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASP----AGLL 173
           Q  Y +       Q   + +     C S                +P  +A+P     G  
Sbjct: 164 Q--YYSKIRSHPNQMLVSPSQPAPHCSS---------------SNPGINATPELGLGGGT 206

Query: 174 SIAEETLTEFLSKATGTAVEWVQM-----PGMKPGPDSIGIVAISH-------------- 214
              E+  + FL+ A     E +++     P  K    S   V++ +              
Sbjct: 207 RATEKERSMFLNLAITALKELIELEAKHRPFGKIDSRSSKAVSLIYEKYENASNNVIKPP 266

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIE 266
           G    A+R  GLV +    + +   D   W      +  V     V+PTGS    SG+++
Sbjct: 267 GHVVEASRDTGLVPMTCLTLVKTFMDTGKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQ 326

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVR---A 323
           L+  +    + L P R    LRY   L  G  VV + + +         Q P  +    +
Sbjct: 327 LIQAEFQIISPLVPKRQVTFLRYCKELRQGFWVVVDVTPD---------QNPTLLSDGGS 377

Query: 324 EMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLR 382
             LPSG  I     G S +  ++  +     +  + +PL  S   +     +A L RH  
Sbjct: 378 NRLPSGVFIEDMANGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCD 437

Query: 383 QISQ-------EVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID 435
            IS        E+S P ++  G   A +  L+QR++  +   +   +   W  ++   ++
Sbjct: 438 SISTLSSTNLAEIS-PGLSAEG--AAEVVKLAQRMTLNYYSGIMSSSGNKWEKIQ---VE 491

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSE 493
           DV  ++    S M+   L+     P   + +L + A+ +   V    L  FL     R E
Sbjct: 492 DVAPNL----SFMIRKNLNE----PGEFSGILLSAATSVWFPVNQKALFAFLSNPSFRHE 543

Query: 494 WADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRE 553
           W                                   L H    EE + + K +   +   
Sbjct: 544 WDT---------------------------------LIHNTTMEETIRIQKAKRHGNIIS 570

Query: 554 DMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRII 604
            +   + + +LQ    +  +A G  A LV+AP++ +          SD   ++PSGF I+
Sbjct: 571 LLKAGNGMLVLQ---EIWNDASG--AMLVYAPVETNSIEWVKRGGESDHVQLLPSGFSIM 625

Query: 605 P 605
           P
Sbjct: 626 P 626


>gi|31339103|dbj|BAC77158.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 790

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 7/108 (6%)

Query: 3   AVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           A+S+ G  D  D+          +Y R+TP+Q++ LE L+ ECP P   +R +L R    
Sbjct: 64  AISAAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL-- 121

Query: 63  LSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
             +++ +Q+K WFQNRR + K   +R E + L+  N KL A N  + E
Sbjct: 122 --SLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIRE 167



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 118/523 (22%), Positives = 201/523 (38%), Gaps = 117/523 (22%)

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPT-RVAEILKDRPSW-------YRDCRS 250
           GMKP            G    A+R  GLV +D +  + E L D   W             
Sbjct: 347 GMKPA-----------GYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATV 395

Query: 251 VEVVNVLPTGS-SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN-- 307
           +E V+    GS +G + L+  +L   + L P R+   LR+   L +G+  V + S++   
Sbjct: 396 LEEVSTGIAGSRNGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLV 455

Query: 308 -TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS 366
              N  + P   + V+   +PSG +++    G   +  V+H + +  SV ++ RPL  S 
Sbjct: 456 RDHNSGTAPTGGN-VKCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSG 514

Query: 367 TLIAQKTTMAAL-RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEA 417
                +  +A L R    ++  +S  +VT          G+R  ++  L++R++  F   
Sbjct: 515 LAFGARRWLATLQRQCECLAILMSSATVTANDSTAISQEGKR--SMLKLARRMTENFCAG 572

Query: 418 LNGFTDEGWSMLESDGI-----DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKAS 472
           ++  +   WS L  DG      +DV V    S S+            P     V+ + A+
Sbjct: 573 VSASSAREWSKL--DGATGSIGEDVRVMARKSVSE------------PGEPPGVVLSAAT 618

Query: 473 MLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCS--LPVPRAGNFGGQVIL 528
            +   V P  L  FLR+   R+EW     D  S      GP      + +    G  V L
Sbjct: 619 SVWVPVAPEKLFNFLRDEQLRAEW-----DILS----NGGPMQEMTQIAKGQRDGNSVSL 669

Query: 529 PLAHTIEHEEFLEVIKLENMAHYREDMIM--PSDIFLLQLC-SGVDENAVGNCAELVFAP 585
             A  +   +   +I  E        +++  P DI  +QL  +G D   V          
Sbjct: 670 LRASAVSANQSSMLILQETCTDASGSIVVYAPVDIPAMQLVMNGGDSTYVA--------- 720

Query: 586 IDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGST 645
                     ++PSGF I+P     D P             +G TG +  G         
Sbjct: 721 ----------LLPSGFAILP-----DGP------------RIGATGYETGG--------- 744

Query: 646 KSVITIAFQFAFEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
            S++T+AFQ          +   + + V  +I+ +++++  AL
Sbjct: 745 -SLLTVAFQILVNNQPTAKLTVESVETVNNLISCTIKKIKTAL 786


>gi|162462576|ref|NP_001105126.1| OCL4 protein [Zea mays]
 gi|37051038|emb|CAB96424.2| OCL4 protein [Zea mays]
          Length = 808

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 11/109 (10%)

Query: 18  QKMIMDNGK---YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           Q++   NGK   Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K W
Sbjct: 55  QQLATANGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFW 110

Query: 75  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           FQNRR + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 111 FQNRRTQMKAQQD----RADNVLLRAENESLKSDNYRLQAAIRNVVCPN 155



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 18/242 (7%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVN-VLPTGSSGTIELLYMQ--LYAPTTLAPARDFW 285
           LD  +  E+    PS     R+++V+N    +G  G+  LL MQ  L  P+ L PAR+  
Sbjct: 368 LDANKWMELF---PSILSKARTIQVINHGSASGHMGSGSLLLMQAELQFPSPLVPAREVV 424

Query: 286 LLRY-TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHI 344
             RY     ++G+  + +      Q      Q P  VR    PSG +I+    G S +  
Sbjct: 425 FFRYCVHNGDEGTWSIVDFPAEGFQ--LEALQTPSVVRCCRRPSGCIIQDMPNGYSSVVW 482

Query: 345 VDHMDL--EPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQP-SVTGWGRRP 400
           V+H ++  E   + +V +    S +       ++ L R   +++ E+++  +  G  R P
Sbjct: 483 VEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLLQRQCERLASELARNIADLGVIRTP 542

Query: 401 AA---LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD--VTVHVNSSPSKMMGVQLSY 455
            A   +  LSQR+   F+  ++    + W+ L     D   VT   N+ P +  GV L+ 
Sbjct: 543 EARTNMMKLSQRMITSFSANISASGSQSWTSLSETTEDTIRVTTRKNTDPGQPSGVILTA 602

Query: 456 VN 457
           V+
Sbjct: 603 VS 604


>gi|356561849|ref|XP_003549189.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 718

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 130/298 (43%), Gaps = 42/298 (14%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTGSSGT-IELLYMQ 271
           A+R  G+V ++   + ++  D   W           R++EV++    G  G  ++L+Y +
Sbjct: 279 ASRDSGVVIMNGLTLVDMFMDPNKWMELFSTIVTMARTIEVISSGMMGGHGGSLQLMYEE 338

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   + L   R+F+ LRY   +E G   + + S + TQ+    PQ     R+  LPSG  
Sbjct: 339 LQVLSPLVSTREFYFLRYCQQIEQGLWAIVDVSYDFTQDNQFAPQ----FRSHRLPSGVF 394

Query: 332 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRP-LYESSTLIAQKTTMAALRHLRQISQEVS 389
           I+    G S +  ++H+++E  + V  + R  +Y      AQ+     L  L+++ + ++
Sbjct: 395 IQDMPNGYSKVTWIEHVEIEDKTPVHRLYRNIIYSGIAFGAQR----WLTTLQRMCERIA 450

Query: 390 QPSVTGWGRR--------PAALRA---LSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
              VTG   R        P   R+   L+QR+   F  +++      W+ L   G+++V 
Sbjct: 451 CLLVTGNSTRDLGGVIPSPEGKRSMMKLAQRMVTNFCASISSSAGHRWTTLSGSGMNEVG 510

Query: 439 VHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
           V V    S             P   N V+ + A+ +   +PP  +  F ++   R +W
Sbjct: 511 VRVTVHKS-----------SDPGQPNGVVLSAATTIWLPIPPQTVFNFFKDEKKRPQW 557



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 7/105 (6%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           S G R     G         +Y R+T  Q++ LE ++ ECP P   +R QL RE      
Sbjct: 7   SPGDRHHHHDGSSDSQRRKKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSREL----G 62

Query: 66  IEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
           + P+QIK WFQNRR + K   +R +   L+A N K+   N  + E
Sbjct: 63  LAPRQIKFWFQNRRTQMKAQHERADNCALRAENDKIRCENIAIRE 107


>gi|125571186|gb|EAZ12701.1| hypothetical protein OsJ_02619 [Oryza sativa Japonica Group]
          Length = 840

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 22/148 (14%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D  D           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+
Sbjct: 106 GASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NL 161

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF 126
           E +Q+K WFQNRR + K + E              N LL +END+L+        EN   
Sbjct: 162 ESRQVKFWFQNRRTQMKTQIERHE-----------NALLRQENDKLRA-------ENMTI 203

Query: 127 RQQTQNAATLATTDTSCESVVTSGQHHL 154
           R+  +N    +    +    V+  + HL
Sbjct: 204 REAMRNPMCASCGGAAVLGEVSLEEQHL 231



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 22/220 (10%)

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIE 266
           G    A R  G+  +    + + L D P W      V       +++ +G     SG+I+
Sbjct: 398 GYVSEATRESGIAIISSVDLVDSLMDAPRWSEMFPCVVARASTTDIISSGMGGTRSGSIQ 457

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDG----SLVVCERSLNNTQNGPSMPQAPHFVR 322
           L++ +L   + L P R+   LR+     +G      V  +  L   QNG     +  ++ 
Sbjct: 458 LMHAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGGGGSSSSSYMG 517

Query: 323 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLR 382
             +LP+G +++    G S +  V H + +  +  ++ RPL  S   +  +  +A+L+   
Sbjct: 518 CRLLPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGARRWLASLQRQC 577

Query: 383 Q---ISQEVSQP-----SVTGWGRRPAALRALSQRLSRGF 414
           Q   I    S P     ++T  GRR  ++  L+QR++  F
Sbjct: 578 QYLAILCSNSLPARDHAAITPVGRR--SMLKLAQRMTDNF 615


>gi|125564438|gb|EAZ09818.1| hypothetical protein OsI_32106 [Oryza sativa Indica Group]
          Length = 815

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 22/148 (14%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D  D           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+
Sbjct: 105 GASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NL 160

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF 126
           E +Q+K WFQNRR + K + E              N LL +END+L+        EN   
Sbjct: 161 ESRQVKFWFQNRRTQMKTQIERHE-----------NALLRQENDKLRA-------ENMTI 202

Query: 127 RQQTQNAATLATTDTSCESVVTSGQHHL 154
           R+  +N    +    +    V+  + HL
Sbjct: 203 REAMRNPMCASCGGAAVLGEVSLEEQHL 230



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 22/236 (9%)

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIE 266
           G    A R  G+  +    + + L D P W      V       +++ +G     SG+I+
Sbjct: 397 GYVSEATRESGIAIISSVDLVDSLMDAPRWSEMFPCVVARASTTDIISSGMGGTRSGSIQ 456

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDG----SLVVCERSLNNTQNGPSMPQAPHFVR 322
           L++ +L   + L P R+   LR+     +G      V  +  L   QNG     +  ++ 
Sbjct: 457 LMHAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGGGGSSSSSYMG 516

Query: 323 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLR 382
             +LP+G +++    G S +  V H + +  +  ++ RPL  S   +  +  +A+L+   
Sbjct: 517 CRLLPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGARRWLASLQRQC 576

Query: 383 Q---ISQEVSQP-----SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE 430
           Q   I    S P     ++T  GRR  ++  L+QR++  F   +     + W  L+
Sbjct: 577 QYLAILCSNSLPARDHAAITPVGRR--SMLKLAQRMTDNFCAGVCASAAQKWRRLD 630


>gi|224125934|ref|XP_002329753.1| predicted protein [Populus trichocarpa]
 gi|222870661|gb|EEF07792.1| predicted protein [Populus trichocarpa]
          Length = 725

 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 188/470 (40%), Gaps = 92/470 (19%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRD-------CRSVEVVNVLPTGS-SGTIELLYMQ 271
           A+R  G+V ++   + ++  D   W           +++EV++    GS SG+++L+Y +
Sbjct: 276 ASRDSGVVIMNGVALVDMFMDSNKWVESFPTMVSVAKTIEVISSGMLGSHSGSLQLMYEE 335

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   + L P R+F +LRY   +E G   +   S +       +PQ     R   LPSG L
Sbjct: 336 LQVLSPLVPTREFCILRYCQQIEQGLWAIVSVSYD-------IPQFASQFRCHRLPSGCL 388

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVP-EVLRPLYESSTLIAQKTTMAALRHL--RQISQEV 388
           I+    G S +  V+H+++E  +   ++ R L  S      +  +A L+ +  R   Q V
Sbjct: 389 IQDMPNGYSKVTWVEHVEIEDKTTTHQLYRDLIHSGMAFGAERWLATLQRMCERVACQMV 448

Query: 389 SQPSVTGWGR---RPAALRA---LSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN 442
           S  S    G     P   R+   L+QR+   F  +++      WS L   G+ DV V V 
Sbjct: 449 SGNSTRDLGGVIPSPEGKRSMMKLAQRMVSSFCSSISTSNSHRWSTLS--GLHDVGVRVT 506

Query: 443 SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRS--EW-ADSSI 499
              S             P   N V+ + A+     V P  +  F ++ R+  +W   SS 
Sbjct: 507 LHKST-----------DPGQPNGVVLSAATTFSLPVSPQNVFSFFKDERTRPQWDVLSSG 555

Query: 500 DAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
           +A    A             G+  G  I  L   +           +    Y       +
Sbjct: 556 NAVQEVAHITN---------GSHPGNCISVLRVRLSLFGSFSTFYSDCFTAYNTSQ---N 603

Query: 560 DIFLLQLCSGVDENAVGNCAEL-VFAPID------ASFSDD---APIIPSGFRIIPLDSG 609
           ++ +LQ      E+ V +   L V+ P+D      A   +D    P++PSGF I P D  
Sbjct: 604 NMLILQ------ESCVDSSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFAISP-DGR 656

Query: 610 KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTK----SVITIAFQF 655
            D                   G+ AS  S+TQ GST     S+IT+AFQ 
Sbjct: 657 PD------------------QGDGASTSSNTQ-GSTARLSGSLITVAFQI 687



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 29  RYHRHTALQIQKLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 84

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R + S L+A N K+   N  + E
Sbjct: 85  HERADNSSLRAENDKIRCENIAIRE 109


>gi|357159532|ref|XP_003578476.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 2
           [Brachypodium distachyon]
          Length = 777

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 7/104 (6%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D  D           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+
Sbjct: 23  GASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NL 78

Query: 67  EPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
           E +Q+K WFQNRR + K   +R E + L+  N KL A N  + E
Sbjct: 79  ESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIRE 122



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 108/485 (22%), Positives = 178/485 (36%), Gaps = 78/485 (16%)

Query: 212 ISHGCTGVAARACGLVGLDPTRVAEI---LKDRPSWY--------RDCRSVEVVNVLPTG 260
           ++H   G  + A   VGL     AE+   L D   W         R   +  +   +P  
Sbjct: 289 LAHSPAGFVSEATREVGLAIVSSAELVDSLMDAARWAEMFPCVVARASTTDIISGGMPGT 348

Query: 261 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT---QNGPSMPQA 317
            SG+I+L++ +L   + L P R+   LR+     +G   V + S +       G     A
Sbjct: 349 RSGSIQLMHAELQVLSPLVPIREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAA 408

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
             ++   +LPSG ++     G + +  V H + +  +V  + RPL  S   +  +  +A+
Sbjct: 409 AGYMGCRLLPSGCVVEDMRNGYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLAS 468

Query: 378 LRHLRQ---ISQEVSQPSVTGWGRRPAALRA---LSQRLSRGFNEALNGFTDEGWSMLES 431
           L+   Q   I +  S PS       P   R+   L+QR++  F   +     + W  L+ 
Sbjct: 469 LQRQCQYLAILRNNSLPSQDNQAISPVGRRSMLKLAQRMADNFCAGVCATAAQKWRRLDE 528

Query: 432 -------DGIDDVTVHV-----NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
                   G  D   H           +MM        G P     VL A  S+ L   P
Sbjct: 529 WRVEGAMPGGGDQQQHQAGGGDGDKEVRMMARHSVGAPGEP--PGVVLSATTSVRLPGTP 586

Query: 480 PAILLRFLREH--RSEW-------ADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPL 530
           P  +  +LR+   R EW       A   +D  +   +     SL  P A +     +L L
Sbjct: 587 PQRVFDYLRDEQRRGEWDILANGEAMQEMDHIAKGQLHGNAVSLLRPNATSGNQNNMLIL 646

Query: 531 AHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASF 590
             T        V+              P D+                   +V    D+++
Sbjct: 647 QETCTDSSGSLVV------------YAPVDV---------------QSMHIVMNGGDSAY 679

Query: 591 SDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVIT 650
                ++PSGF I+P   G +TP P   +D A + +    G+  S        +T S++T
Sbjct: 680 ---VSLLPSGFAILP--DGHNTP-PGAVVDPAGSSQQSQQGSSESAAHGNN--NTGSLVT 731

Query: 651 IAFQF 655
           +AFQ 
Sbjct: 732 VAFQI 736


>gi|357159529|ref|XP_003578475.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 1
           [Brachypodium distachyon]
          Length = 864

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 7/104 (6%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D  D           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+
Sbjct: 110 GASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NL 165

Query: 67  EPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
           E +Q+K WFQNRR + K   +R E + L+  N KL A N  + E
Sbjct: 166 ESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIRE 209



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 110/487 (22%), Positives = 186/487 (38%), Gaps = 82/487 (16%)

Query: 212 ISHGCTGVAARACGLVGLDPTRVAEI---LKDRPSWY--------RDCRSVEVVNVLPTG 260
           ++H   G  + A   VGL     AE+   L D   W         R   +  +   +P  
Sbjct: 376 LAHSPAGFVSEATREVGLAIVSSAELVDSLMDAARWAEMFPCVVARASTTDIISGGMPGT 435

Query: 261 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT---QNGPSMPQA 317
            SG+I+L++ +L   + L P R+   LR+     +G   V + S +       G     A
Sbjct: 436 RSGSIQLMHAELQVLSPLVPIREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAA 495

Query: 318 PHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAA 377
             ++   +LPSG ++     G + +  V H + +  +V  + RPL  S   +  +  +A+
Sbjct: 496 AGYMGCRLLPSGCVVEDMRNGYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLAS 555

Query: 378 LRHLRQ---ISQEVSQPSVTGWGRRPAALRA---LSQRLSRGFNEALNGFTDEGWSMLES 431
           L+   Q   I +  S PS       P   R+   L+QR++  F   +     + W  L+ 
Sbjct: 556 LQRQCQYLAILRNNSLPSQDNQAISPVGRRSMLKLAQRMADNFCAGVCATAAQKWRRLDE 615

Query: 432 -------DGIDDVTVHV-----NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
                   G  D   H           +MM        G P     VL A  S+ L   P
Sbjct: 616 WRVEGAMPGGGDQQQHQAGGGDGDKEVRMMARHSVGAPGEP--PGVVLSATTSVRLPGTP 673

Query: 480 PAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHE 537
           P  +  +LR+   R EW    I A   A                   Q +  +A    H 
Sbjct: 674 PQRVFDYLRDEQRRGEW---DILANGEAM------------------QEMDHIAKGQLHG 712

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDA-------SF 590
             + +++    +  + +M++     L + C+    + V      V+AP+D        + 
Sbjct: 713 NAVSLLRPNATSGNQNNMLI-----LQETCTDSSGSLV------VYAPVDVQSMHIVMNG 761

Query: 591 SDDA--PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSV 648
            D A   ++PSGF I+P   G +TP P   +D A + +    G+  S        +T S+
Sbjct: 762 GDSAYVSLLPSGFAILP--DGHNTP-PGAVVDPAGSSQQSQQGSSESAAHGNN--NTGSL 816

Query: 649 ITIAFQF 655
           +T+AFQ 
Sbjct: 817 VTVAFQI 823


>gi|12002853|gb|AAG43405.1|AF172931_1 homeobox 1 [Picea abies]
          Length = 763

 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 121/304 (39%), Gaps = 34/304 (11%)

Query: 208 GIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVE----VVNVLPTGSSG 263
           GI    +G    A+R   +V ++   + E L D   W      +      V+V  TG +G
Sbjct: 322 GIGPRPYGLKAEASRETAVVIMNAINLVETLMDVNQWSSMFPGIVSRPFTVDVFSTGVAG 381

Query: 264 T----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
                +++++ +   P+ L P R+ + +RY     D    V + SL++ +   S      
Sbjct: 382 NYNGALQVMHAEFQVPSPLVPTREIYFVRYCKQHSDSIWAVVDVSLDSLRGNSS-----S 436

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR 379
            +R    PSG LI+      S +  V+H++ +  +V  + R L  S      K  +A L+
Sbjct: 437 VIRCRRRPSGCLIQEMPNSYSKVTWVEHVEADDRAVHHIYRQLVNSGMAFGAKRWIATLQ 496

Query: 380 HL--RQISQEVSQPSVTGWGRRPA-----ALRALSQRLSRGFNEALNGFTDEGWSMLESD 432
               R  S   S       G  P+     ++  L++R+   F   ++  T   W+ L   
Sbjct: 497 RQCERLASVLASNIPARDLGVIPSPEGRKSILKLAERMVTSFCAGVSASTAHTWTTLSGS 556

Query: 433 GIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH-- 490
           G +DV V    S               P     ++ + A+ L   VPP  +  FLR+   
Sbjct: 557 GAEDVRVMTRKSIDD------------PGRPPGIILSAATSLWLPVPPKKVFDFLRDENS 604

Query: 491 RSEW 494
           R+EW
Sbjct: 605 RNEW 608



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 41/179 (22%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 87  RYHRHTQHQIQEMEMFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 142

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
            E                    EN +L+ +  +L  EN  +R+   NA+       +C  
Sbjct: 143 HE------------------RHENTQLRSENEKLRSENMRYREALNNASC-----PNCGG 179

Query: 146 VVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGP 204
               G+     QQ              L +    L E + + +G A ++V  P +  GP
Sbjct: 180 PAALGEMSFDEQQ--------------LRMENARLREEIDRISGIAAKYVGKPLLSFGP 224


>gi|242049914|ref|XP_002462701.1| hypothetical protein SORBIDRAFT_02g030470 [Sorghum bicolor]
 gi|241926078|gb|EER99222.1| hypothetical protein SORBIDRAFT_02g030470 [Sorghum bicolor]
          Length = 872

 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 36/163 (22%)

Query: 5   SSGGSRDSRDSGGQKMIMDNG-------KYVRYTPEQVEALERLYHECPKPSSMRRQQLI 57
           S  GS +   + G ++  DN        +Y R+TP+Q++ LE ++ ECP P   +R +L 
Sbjct: 98  SRSGSDNVDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELS 157

Query: 58  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS 117
           +      N+E +Q+K WFQNRR + K + E              N LL +END+L+    
Sbjct: 158 KRL----NLESRQVKFWFQNRRTQMKTQIERHE-----------NALLRQENDKLRA--- 199

Query: 118 QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQH 160
               EN   R+  +N        T+C      G+  L  ++QH
Sbjct: 200 ----ENMTIREAMRNPIC-----TNCGGAAVLGEVSL--EEQH 231



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 20/187 (10%)

Query: 262 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN----------NTQNG 311
           SG+I+L++ +L   + L P R+   LR+     +G   V + S++          +  + 
Sbjct: 448 SGSIQLMHAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAILRPDGGGNHHHHH 507

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
                A  ++   +LP+G +++    G S +  V H + +   V ++ RPL +S   +  
Sbjct: 508 AHNGGAAGYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDEAVVHQLYRPLLQSGQALGA 567

Query: 372 KTTMAALRHLRQ---ISQEVSQP-----SVTGWGRRPAALRALSQRLSRGFNEALNGFTD 423
           +  +A+L+   Q   I    S P     ++T  GRR  ++  L+QR++  F   +     
Sbjct: 568 RRWLASLQRQCQYLAILCSNSLPARDHAAITPVGRR--SMLKLAQRMTDNFCAGVCASAA 625

Query: 424 EGWSMLE 430
           + W  L+
Sbjct: 626 QKWRRLD 632


>gi|226501626|ref|NP_001145750.1| uncharacterized protein LOC100279257 [Zea mays]
 gi|219884299|gb|ACL52524.1| unknown [Zea mays]
 gi|345195188|tpg|DAA34959.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413916966|gb|AFW56898.1| putative homeobox/lipid-binding domain family protein isoform 1
           [Zea mays]
 gi|413916967|gb|AFW56899.1| putative homeobox/lipid-binding domain family protein isoform 2
           [Zea mays]
          Length = 802

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q+E +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 110 RYHRHTQHQIEEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 165

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R+E ++L+A N KL A N
Sbjct: 166 HERQENAQLRAENDKLRAEN 185



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 157/377 (41%), Gaps = 83/377 (22%)

Query: 256 VLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 311
           VL TG +G+    ++++ M+   P+ L P R+ +  RY     DG+  V + SL++ +  
Sbjct: 402 VLSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFARYCKNNPDGTWAVVDVSLDSLRPS 461

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
           P++       +    PSG L++    G S +  V+H++++  SV  + RPL  S      
Sbjct: 462 PAL-------KCRRRPSGCLVQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLGFGA 514

Query: 372 KTTMAAL-RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFT 422
              +  L R   +++  ++     G         GR+  ++  L++R+   F   +    
Sbjct: 515 TRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGRK--SMLKLAERMVASFCGGVTASA 572

Query: 423 DEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
              W+ L   G +DV V    S   P +  G+              VL A  S  L  VP
Sbjct: 573 AHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VP 617

Query: 480 PAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHE 537
           P  +  FLR+   RSEW   S    +  AV                 Q +  +A+  +H 
Sbjct: 618 PKRVFDFLRDETSRSEWDILS----NGGAV-----------------QEMAHIANGRDHG 656

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------A 588
             + ++++ +    + +M++     L + C+    +A G  + +V+AP+D          
Sbjct: 657 NCVSLLRVNSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDVVAMNVVLNG 705

Query: 589 SFSDDAPIIPSGFRIIP 605
              D   ++PSGF I+P
Sbjct: 706 GDPDYVALLPSGFAILP 722


>gi|413916965|gb|AFW56897.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 798

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q+E +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 106 RYHRHTQHQIEEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 161

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R+E ++L+A N KL A N
Sbjct: 162 HERQENAQLRAENDKLRAEN 181



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 157/377 (41%), Gaps = 83/377 (22%)

Query: 256 VLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 311
           VL TG +G+    ++++ M+   P+ L P R+ +  RY     DG+  V + SL++ +  
Sbjct: 398 VLSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFARYCKNNPDGTWAVVDVSLDSLRPS 457

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
           P++       +    PSG L++    G S +  V+H++++  SV  + RPL  S      
Sbjct: 458 PAL-------KCRRRPSGCLVQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLGFGA 510

Query: 372 KTTMAAL-RHLRQISQEVSQPSVTG--------WGRRPAALRALSQRLSRGFNEALNGFT 422
              +  L R   +++  ++     G         GR+  ++  L++R+   F   +    
Sbjct: 511 TRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGRK--SMLKLAERMVASFCGGVTASA 568

Query: 423 DEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
              W+ L   G +DV V    S   P +  G+              VL A  S  L  VP
Sbjct: 569 AHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VP 613

Query: 480 PAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHE 537
           P  +  FLR+   RSEW   S    +  AV                 Q +  +A+  +H 
Sbjct: 614 PKRVFDFLRDETSRSEWDILS----NGGAV-----------------QEMAHIANGRDHG 652

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------A 588
             + ++++ +    + +M++     L + C+    +A G  + +V+AP+D          
Sbjct: 653 NCVSLLRVNSANSNQSNMLI-----LQESCT----DASG--SYVVYAPVDVVAMNVVLNG 701

Query: 589 SFSDDAPIIPSGFRIIP 605
              D   ++PSGF I+P
Sbjct: 702 GDPDYVALLPSGFAILP 718


>gi|197116169|dbj|BAG68833.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 104/464 (22%), Positives = 178/464 (38%), Gaps = 76/464 (16%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R+T  Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+R + K   + 
Sbjct: 48  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNKRNQTKINSD- 102

Query: 89  SRLQAVNRKLTAMNKLLMEENDR-------------------LQKQVSQLVYENTFFRQQ 129
            RL+ +  +      LL +   R                   +  +V +L+ ENT   ++
Sbjct: 103 -RLENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLIVENTILERE 161

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASP----AGLLSIAEETLTEFLS 185
             N           + +V+  Q    P     +P  +A+P     G     E+  + FL 
Sbjct: 162 I-NQLYSKIPSRPNQMLVSPSQ---PPHCSSSNPGINATPELGLGGGTRTTEKERSMFLD 217

Query: 186 KATGTAVEWVQMPGMK---PGPDSIGIVAISH----------------GCTGVAARACGL 226
            A     E +++  M       DS    A+S                 G    A+R  GL
Sbjct: 218 LAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREIGL 277

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTL 278
           V +    + +   D   W      +  V     V+PTGS    SG+++L+  +    + L
Sbjct: 278 VPMTCLTLVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVISPL 337

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
            P R    LRY   L  G  VV + + +  QN   +       R   LPSG  I     G
Sbjct: 338 VPKRQVTFLRYCKELRHGLWVVVDVTPD--QNPTLLSDGGSINR---LPSGLFIEDMANG 392

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQ-------EVSQ 390
            S +  ++  +     +  + +PL  S   +     +A L RH   +S        E+S 
Sbjct: 393 YSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLAEIS- 451

Query: 391 PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           P ++  G   + +  L+QR++  +   +   +   W  ++ + +
Sbjct: 452 PGLSAKG--ASEVVKLAQRMTLNYYTGITSSSGNKWEKIQVENV 493


>gi|218197780|gb|EEC80207.1| hypothetical protein OsI_22100 [Oryza sativa Indica Group]
          Length = 613

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 22/107 (20%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K +
Sbjct: 18  RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
            E            A N  L  END+++        EN   R+  +N
Sbjct: 74  HE-----------RADNCFLRAENDKIR-------CENIAIREALKN 102



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 123/292 (42%), Gaps = 35/292 (11%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGTIE---LLYMQL 272
            +R  GLV +    +A++  D   W     S+      ++VL  G  G  E   L+Y +L
Sbjct: 268 GSRESGLVLMSAVALADVFMDTNKWMEFFPSIVSKAHTIDVLVNGMGGRSESLILMYEEL 327

Query: 273 YAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLI 332
           +  T   P R+   +RY   +E G   + + S++  ++       P   R+  LPSG LI
Sbjct: 328 HIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGAPPP---RSRRLPSGCLI 384

Query: 333 RPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTLIAQKTTMAAL-----RHLRQISQ 386
                G S +  V+HM++E  S   VL R L  S         +AAL     R+   ++ 
Sbjct: 385 ADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASLVAL 444

Query: 387 EVSQ--PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS 444
            V      VT  G+R  ++  LSQR+   F  +L       W+ L   G ++V+V V   
Sbjct: 445 GVPHHIAGVTPEGKR--SMMKLSQRMVNSFCSSLGASQMHQWTTL--SGSNEVSVRVTMH 500

Query: 445 PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
            S             P   N V+ + A+ +   VP   +  F+R+   RS+W
Sbjct: 501 RST-----------DPGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTRSQW 541


>gi|242034971|ref|XP_002464880.1| hypothetical protein SORBIDRAFT_01g028160 [Sorghum bicolor]
 gi|241918734|gb|EER91878.1| hypothetical protein SORBIDRAFT_01g028160 [Sorghum bicolor]
          Length = 827

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 11/103 (10%)

Query: 24  NGK---YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 80
           NGK   Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR 
Sbjct: 83  NGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRT 138

Query: 81  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 139 QMKAQQD----RADNVLLRAENESLKSDNYRLQAAIRNVVCPN 177



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 18/242 (7%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVN-VLPTGSSGTIELLYMQ--LYAPTTLAPARDFW 285
           LD  +  E+    PS     R+++V+N    +G  G+  LL MQ  +  P+ L PAR+  
Sbjct: 387 LDANKWMELF---PSIVSKARTIQVINHGARSGHMGSGSLLLMQAEVQFPSPLVPAREVV 443

Query: 286 LLRY-TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHI 344
             RY     ++G+  V +   +  Q      Q    V+    PSG +I+    G S +  
Sbjct: 444 FFRYCMHNGDEGTWSVVDFPADGFQ--LEGLQTSSVVKCCRRPSGCIIQDMPNGYSSVVW 501

Query: 345 VDHMDL--EPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQP-SVTGWGRRP 400
           V+HM++  E   + +V +    S         ++ L R   +++ E+++  +  G  R P
Sbjct: 502 VEHMEMVGEEKPLHQVFKDYVASGYAFGATRWVSLLQRQCERLASELARNIADLGVIRTP 561

Query: 401 AA---LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD--VTVHVNSSPSKMMGVQLSY 455
            A   +  LSQR+   F+  ++    + W+ L     D   VT   N+ P +  GV L+ 
Sbjct: 562 EARTNMMKLSQRMITTFSANISASGSQSWTALSETTEDTIRVTTRKNTDPGQPSGVILTA 621

Query: 456 VN 457
           V+
Sbjct: 622 VS 623


>gi|197116167|dbj|BAG68832.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 109/487 (22%), Positives = 185/487 (37%), Gaps = 80/487 (16%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           SG      D  G +M     +  R+T  Q + LE  Y E P P+  +R +L +      N
Sbjct: 18  SGAENGESDQDGGRM----RRAHRHTAYQTQELENFYLENPLPTEDQRYELGQRL----N 69

Query: 66  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDR-------------- 111
           +EPKQ+K WFQN+R + K    + RL+ +  +      LL +   R              
Sbjct: 70  MEPKQVKFWFQNKRNQIK--INSDRLENITLREDHDRLLLTQHQLRSAMLHCSCNICGRA 127

Query: 112 -----LQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRD 166
                +  +V +L+ ENT   ++  N           + +V+  Q    P     +P  +
Sbjct: 128 TNCGDIDYEVQKLIVENTILEREI-NQLYSKIPSRPNQMLVSPSQ---PPHCSSSNPGIN 183

Query: 167 ASP----AGLLSIAEETLTEFLSKATGTAVEWVQMPGMK---PGPDSIGIVAISH----- 214
           A+P     G     E+  + FL  A     E +++  M       DS    A+S      
Sbjct: 184 ATPELGLGGGTRTTEKERSMFLDLAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKY 243

Query: 215 -----------GCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPT 259
                      G    A+R  GLV +    + +   D   W      +  V     V+PT
Sbjct: 244 KNASNNVTKPPGHVVEASREIGLVPMTCLTLVKTFMDTEKWVNVFAPIVPVASTRKVIPT 303

Query: 260 GS----SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 315
           GS    SG+++L+  +    + L P R    LRY   L  G  VV + + +  QN   + 
Sbjct: 304 GSGGTKSGSLQLIQAEFQVISPLVPKRQVTFLRYCKELRHGLWVVVDVTPD--QNPTLLS 361

Query: 316 QAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTM 375
                 R   LPSG  I     G S +  ++  +     +  + +PL  S   +     +
Sbjct: 362 DGGSINR---LPSGLFIEDMANGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWL 418

Query: 376 AAL-RHLRQISQ-------EVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWS 427
           A L RH   +S        E+S P ++  G   + +  L+QR++  +   +   +   W 
Sbjct: 419 ATLQRHCESLSTLSSTNLAEIS-PGLSAKG--ASEVVKLAQRMTLNYYTGITSSSGNKWE 475

Query: 428 MLESDGI 434
            ++ + +
Sbjct: 476 KIQVENV 482


>gi|197116201|dbj|BAG68840.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kawasakiana]
          Length = 690

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 103/464 (22%), Positives = 178/464 (38%), Gaps = 76/464 (16%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R+T  Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 48  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 101

Query: 89  SRLQAVNRKLTAMNKLLMEENDR-------------------LQKQVSQLVYENTFFRQQ 129
            RL+ +  +      LL +   R                   +  +V +L+ ENT   ++
Sbjct: 102 DRLENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLIVENTILERE 161

Query: 130 TQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASP----AGLLSIAEETLTEFLS 185
             N           + +V+  Q    P     +P  +A+P     G     E+  + FL 
Sbjct: 162 I-NQLYSKIPSRPNQMLVSPSQ---PPHCSSSNPGINATPELGLGGGTRTTEKERSMFLD 217

Query: 186 KATGTAVEWVQMPGMK---PGPDSIGIVAISH----------------GCTGVAARACGL 226
            A     E +++  M       DS    A+S                 G    A+R  GL
Sbjct: 218 LAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREIGL 277

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTL 278
           V +    + +   D   W      +  V     V+PTGS    SG+++L+  +    + L
Sbjct: 278 VPMTCLTLVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVISPL 337

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
            P R    LRY   L  G  VV + + +  QN   +       R   LPSG  I     G
Sbjct: 338 VPKRQVTFLRYCKELRHGLWVVVDVTPD--QNPTLLSDGGSINR---LPSGLFIEDMANG 392

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQ-------EVSQ 390
            S +  ++  +     +  + +PL  S   +     +A L RH   +S        E+S 
Sbjct: 393 YSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLAEIS- 451

Query: 391 PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           P ++  G   + +  L+QR++  +   +   +   W  ++ + +
Sbjct: 452 PGLSAKG--ASEVVKLAQRMTLNYYTGITSSSGNKWEKIQVENV 493


>gi|345195184|tpg|DAA34957.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413919601|gb|AFW59533.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 742

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 47  RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNH 102

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R+E S+L++ N KL A N
Sbjct: 103 HERQENSQLRSENEKLRAEN 122



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 92/422 (21%), Positives = 170/422 (40%), Gaps = 85/422 (20%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----I 265
           +G    A+R   +V +    + EIL D   +     S+      + VL TG +G     +
Sbjct: 303 YGLNSEASRDSAVVIMTHANLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGNYNGAL 362

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +++ ++   P+ L P R+ + +RY     DG+  V + SL+  + G         ++   
Sbjct: 363 QVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDGLRPGA-------VLKCRR 415

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQI 384
            PSG LI+    G S +  V+H++++  SV  + + L  S      +  +  L R   ++
Sbjct: 416 RPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHSIYKLLVSSGLAFGARRWVGTLDRQCERL 475

Query: 385 SQEVSQ--PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           +  ++   P+     +T    R + L+ L++R+   F   +       W+ L   G +DV
Sbjct: 476 ASVMASNIPTSDIGVITSAEGRKSMLK-LAERMVMSFCGGVTASAAHQWTTLSGSGAEDV 534

Query: 438 TVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RS 492
            V    S   P +  G+              VL A  S  L  VPP  +  FLR+   RS
Sbjct: 535 RVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VPPKRVFDFLRDESSRS 579

Query: 493 EWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYR 552
           EW     D  S   V                 Q +  +A+  +H   + ++++ +    +
Sbjct: 580 EW-----DILSNGGVV----------------QEMAHIANGRDHGNCVSLLRVNSTNSNQ 618

Query: 553 EDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRI 603
             M++     L + C+ +  + V      ++AP+D             D   ++PSGF I
Sbjct: 619 SSMLI-----LQESCTDMSGSYV------IYAPVDVVAMNVVLNGGDPDYVALLPSGFAI 667

Query: 604 IP 605
           +P
Sbjct: 668 LP 669


>gi|225466249|ref|XP_002268272.1| PREDICTED: homeobox-leucine zipper protein ROC8 [Vitis vinifera]
 gi|297738149|emb|CBI27350.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 24/154 (15%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M   +GG+    D  G         Y R+TP+Q++ LE  + +CP P   +R+QL RE  
Sbjct: 1   MEFRTGGNGSGGDQDGPNPRRGRKVYNRHTPQQIQRLEAFFKDCPHPDEAQRRQLGREL- 59

Query: 62  ILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME----------- 107
               +E +QIK WFQN+R + K   +R + + L+A N ++   N  + E           
Sbjct: 60  ---GLESRQIKFWFQNKRTQTKTQHERADNTALRAENERIQCENLAIREALKNVICPSCG 116

Query: 108 -----ENDRLQKQVSQLVYENTFFRQQTQNAATL 136
                E +R Q+ + +L  EN   +++ +  + L
Sbjct: 117 GPPFGEEER-QRNIEKLQLENAQLKEEHEKVSNL 149



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 112/500 (22%), Positives = 194/500 (38%), Gaps = 127/500 (25%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS-SGTIELLYMQLYAPTTLAPARDFWLL 287
           LDP +  ++    P+      +++V+     GS SG+++L+Y Q++  + L   R+F+ L
Sbjct: 301 LDPNKYVDLF---PTIVTKASTIQVLEAGIIGSRSGSLQLMYEQMHILSPLVAPREFYFL 357

Query: 288 RYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDH 347
           RY   +E G  V+ + S + +++G      P+ +R   LPSG +I+    G S +  V+H
Sbjct: 358 RYCQQIELGVWVMVDVSYDYSKDG-----QPNSLRFWKLPSGCMIQDLPDGCSKVTWVEH 412

Query: 348 MDLEPWSVPEVL-RPLYESSTLIAQKTTMAALRHL--------------RQISQEVSQPS 392
           ++++  S+   L R L   S     +  +  L+ +              R ++  +S P 
Sbjct: 413 VEVDDKSLTHRLYRDLVSGSLAFGAERMVGTLQRMCERLAYLADENTPTRDLAGVISLPE 472

Query: 393 VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQ 452
               GRR  ++  L  R+ + F   L+      +  L       V V V  S        
Sbjct: 473 ----GRR--SIMKLGHRMVKDFCGVLSMSGKLDFPQLSEVDTSGVRVSVRKSTE------ 520

Query: 453 LSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSID------AYSA 504
                  P     ++ + A+ L   +    +  F+R+   R +W   S        A+ A
Sbjct: 521 -------PGQPGGLIVSAATSLWLPMQCQTIFDFIRDEKMRPQWDVLSSGNPVHEIAHIA 573

Query: 505 AAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLL 564
             V  G C+            +I P   T             NM   +E  + P      
Sbjct: 574 NGVNPGNCT-----------SIIRPFVPT-----------ENNMLMLQESCVEP------ 605

Query: 565 QLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIPLDSGKDTPSP 615
               G+          +V+APID            S + PI+PSGF I+  D   D    
Sbjct: 606 --LGGL----------VVYAPIDIPAINVAIRGEESGNIPILPSGF-IVSGDGRSD---- 648

Query: 616 NRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAF----EMHLQENVASMARQ 671
                         +G   + D +   GS  S++T+AFQ           Q N+ S+A  
Sbjct: 649 --------------SGAGCTSDGNIM-GSGGSLLTVAFQVLVCGPAAPQQQLNMESVAT- 692

Query: 672 YVRGIIAS-VQRVALALSPS 690
            V  +I+S VQ++ +AL+ S
Sbjct: 693 -VNTLISSTVQKIKIALNCS 711


>gi|18266646|gb|AAL67592.1|AC018929_14 putative outer cell layer homeo domain protein [Oryza sativa
           Japonica Group]
 gi|125575788|gb|EAZ17072.1| hypothetical protein OsJ_32569 [Oryza sativa Japonica Group]
          Length = 866

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 8/98 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 121 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 176

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           ++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 177 QD----RADNVILRAENENLKSDNFRLQAAIRNVVCPN 210



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 29/247 (11%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS---SGTIELLYMQLYAPTTLAPARDFW 285
           LD  +  E+    PS     R+++++N         SGT+ L+  ++   + L  AR+  
Sbjct: 410 LDANKWMELF---PSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAREVV 466

Query: 286 LLRY-TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHI 344
             RY     ++GS  + +      + G  + QA   VR    PSG +I+    G S +  
Sbjct: 467 FFRYCVHNADEGSWAIVDFPAEGFEEG--LLQA-SVVRCRRRPSGCIIQDMPNGYSRVVW 523

Query: 345 VDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL--------RQISQEVSQPSVTGW 396
           V+HM++     P  L+P++     +A      A R L        R  S+     +  G 
Sbjct: 524 VEHMEMVGEEKP--LQPVFRD--YVASGAAFGATRWLSILQRQCERLASELARNIADLGV 579

Query: 397 GRRPAA---LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD---VTVHVNSSPSKMMG 450
            R P A   +  LSQR+   F   ++    + W+ L SD   D   VT   N+ P +  G
Sbjct: 580 IRTPEARTNMMKLSQRMITTFCANISASGTQSWTAL-SDSTQDTIRVTTRKNTEPGQPSG 638

Query: 451 VQLSYVN 457
           V L+ V+
Sbjct: 639 VILTAVS 645


>gi|125533056|gb|EAY79621.1| hypothetical protein OsI_34765 [Oryza sativa Indica Group]
          Length = 866

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 8/98 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 121 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 176

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           ++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 177 QD----RADNVILRAENENLKSDNFRLQAAIRNVVCPN 210



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 29/247 (11%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS---SGTIELLYMQLYAPTTLAPARDFW 285
           LD  +  E+    PS     R+++++N         SGT+ L+  ++   + L  AR+  
Sbjct: 410 LDANKWMELF---PSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAREVV 466

Query: 286 LLRY-TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHI 344
             RY     ++GS  + +      + G  + QA   VR    PSG +I+    G S +  
Sbjct: 467 FFRYCVHNADEGSWAIVDFPAEGFEEG--LLQA-SVVRCRRRPSGCIIQDMPNGYSRVVW 523

Query: 345 VDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL--------RQISQEVSQPSVTGW 396
           V+HM++     P  L+P++     +A      A R L        R  S+     +  G 
Sbjct: 524 VEHMEMVGEEKP--LQPVFRD--YVASGAAFGATRWLSILQRQCERLASELARNIADLGV 579

Query: 397 GRRPAA---LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD---VTVHVNSSPSKMMG 450
            R P A   +  LSQR+   F   ++    + W+ L SD   D   VT   N+ P +  G
Sbjct: 580 IRTPEARTNMMKLSQRMITTFCANISASGTQSWTAL-SDSTQDTIRVTTRKNTEPGQPSG 638

Query: 451 VQLSYVN 457
           V L+ V+
Sbjct: 639 VILTAVS 645


>gi|162462506|ref|NP_001105125.1| outer cell layer3 [Zea mays]
 gi|8920423|emb|CAB96423.1| OCL3 protein [Zea mays]
          Length = 863

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 29/135 (21%)

Query: 5   SSGGSRDSRDSGGQKMIMDNG-------KYVRYTPEQVEALERLYHECPKPSSMRRQQLI 57
           S  GS +   + G ++  DN        +Y R+TP+Q++ LE ++ ECP P   +R +L 
Sbjct: 95  SRSGSDNVDGASGDEIDPDNSNPRRKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELS 154

Query: 58  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS 117
           +      N+E +Q+K WFQNRR + K + E              N LL +END+L+    
Sbjct: 155 KRL----NLESRQVKFWFQNRRTQMKTQIERHE-----------NALLRQENDKLRA--- 196

Query: 118 QLVYENTFFRQQTQN 132
               EN   R+  +N
Sbjct: 197 ----ENMTIREAMRN 207



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 24/187 (12%)

Query: 262 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN----------NTQNG 311
           SG+I+L++ +L   + L P R+   LR+      G   V + S++          + QNG
Sbjct: 445 SGSIQLMHAELQVLSPLVPIREVVFLRFCKQHAKGLWAVVDVSVDAILRPDGGHHHAQNG 504

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
                   ++   +LP+G +++    G S +  V H + +   V ++ RPL +S   +  
Sbjct: 505 ----GGAGYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDEAVVHQLYRPLLQSGQALGA 560

Query: 372 KTTMAALRHLRQ---ISQEVSQP-----SVTGWGRRPAALRALSQRLSRGFNEALNGFTD 423
           +  +A+L+   Q   I    S P     ++T  GRR  ++  L+QR++  F   +     
Sbjct: 561 RRWLASLQRQCQYLAILCSNSLPARDHAAITPVGRR--SMLKLAQRMTDNFCAGVCASAA 618

Query: 424 EGWSMLE 430
           + W  L+
Sbjct: 619 QKWRRLD 625


>gi|31339099|dbj|BAC77156.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 879

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 8/98 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 134 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 189

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           ++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 190 QD----RADNVILRAENENLKSDNFRLQAAIRNVVCPN 223



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 29/247 (11%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS---SGTIELLYMQLYAPTTLAPARDFW 285
           LD  +  E+    PS     R+++++N         SGT+ L+  ++   + L  AR+  
Sbjct: 423 LDANKWMELF---PSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAREVV 479

Query: 286 LLRY-TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHI 344
             RY     ++GS  + +      + G  + QA   VR    PSG +I+    G S +  
Sbjct: 480 FFRYCVHNADEGSWAIVDFPAEGFEEG--LLQA-SVVRCRRRPSGCIIQDMPNGYSRVVW 536

Query: 345 VDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL--------RQISQEVSQPSVTGW 396
           V+HM++     P  L+P++     +A      A R L        R  S+     +  G 
Sbjct: 537 VEHMEMVGEEKP--LQPVFRD--YVASGAAFGATRWLSILQRQCERLASELARNIADLGV 592

Query: 397 GRRPAA---LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD---VTVHVNSSPSKMMG 450
            R P A   +  LSQR+   F   ++    + W+ L SD   D   VT   N+ P +  G
Sbjct: 593 IRTPEARTNMMKLSQRMITTFCANISASGTQSWTAL-SDSTQDTIRVTTRKNTEPGQPSG 651

Query: 451 VQLSYVN 457
           V L+ V+
Sbjct: 652 VILTAVS 658


>gi|242077254|ref|XP_002448563.1| hypothetical protein SORBIDRAFT_06g029270 [Sorghum bicolor]
 gi|241939746|gb|EES12891.1| hypothetical protein SORBIDRAFT_06g029270 [Sorghum bicolor]
          Length = 789

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 112 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 167

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E S+L+A N KL A N
Sbjct: 168 HERHENSQLRAENEKLRAEN 187



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 98/437 (22%), Positives = 174/437 (39%), Gaps = 91/437 (20%)

Query: 200 MKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVE----VVN 255
           M PG    G+    +G    A+R   +V +    + EIL D   +     S+      + 
Sbjct: 345 MFPG----GLGPKQYGFKSEASRDSSVVIMTHANLVEILMDVNQYATVFSSIVSRAVTLE 400

Query: 256 VLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 311
           VL TG +G     ++++ ++   P+ L P R+ + +RY     DGS  V + SL++ +  
Sbjct: 401 VLSTGVAGNYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGSWAVVDVSLDSLR-- 458

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
              P +   ++    PSG LI+    G S +  V+H++++  SV  + + L  S      
Sbjct: 459 ---PNS--VLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGP 513

Query: 372 KTTMAAL----RHLRQISQEVSQPSVTGW-----GRRPAALRALSQRLSRGFNEALNGFT 422
              +  L      L  +       S  G      GR+  ++  L++R+   F   +    
Sbjct: 514 PRWVGTLDPQCEPLPSVMPSTIPTSDMGVITSTEGRK--SMLKLAERMVMSFCGGVTASA 571

Query: 423 DEGWSMLESDGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVP 479
              W+ L   G +DV V    S   P +  G+              VL A  S  L  VP
Sbjct: 572 AHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VP 616

Query: 480 PAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHE 537
           P  +  FLR+   RSEW     D  S   V                 Q +  +A+  +H 
Sbjct: 617 PKRVFDFLRDESSRSEW-----DILSNGGVV----------------QEMAHIANGRDHG 655

Query: 538 EFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------A 588
             + ++++ +    + +M++     L + C+    +A G  + +++AP+D          
Sbjct: 656 NCVSLLRVNSTNSNQSNMLI-----LQESCT----DASG--SYVIYAPVDVVAMNVVLNG 704

Query: 589 SFSDDAPIIPSGFRIIP 605
              D   ++PSGF I+P
Sbjct: 705 GDPDYVALLPSGFAILP 721


>gi|186478150|ref|NP_001117231.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189690|gb|AEE27811.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
          Length = 719

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 106/489 (21%), Positives = 191/489 (39%), Gaps = 93/489 (19%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRD----CRSVEVVNVLPTGSSGT----IELLYMQ 271
           A+R   +V ++   + EIL D   W             + VL TG +G     ++++  +
Sbjct: 300 ASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAE 359

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
              P+ L P R+ +  RY     DGS  V + SL++ Q     P  P   R     SG L
Sbjct: 360 FQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQ-----PNPP--ARCRRRASGCL 412

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQ 390
           I+    G S +  V+H++++   V  + + +  +      K  +A L R   +++  ++ 
Sbjct: 413 IQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMAT 472

Query: 391 PSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN 442
              +G         GRR  ++  L++R+   F   ++  T   W+ L   G +DV V   
Sbjct: 473 NISSGEVGVITNQEGRR--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGAEDVRVMTR 530

Query: 443 SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSID 500
            S               P     ++ + A+     VPP  +  FLR+   R+EW     D
Sbjct: 531 KSVDD------------PGRPPGIVLSAATSFWIPVPPKRVFDFLRDENSRNEW-----D 573

Query: 501 AYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSD 560
             S                    G V+  +AH     +    + L   A+  +     S+
Sbjct: 574 ILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRSANSSQ-----SN 609

Query: 561 IFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLD 620
           + +LQ  S  D  A    + +++AP+D               I+ ++   +   P+    
Sbjct: 610 MLILQE-SCTDPTA----SFVIYAPVD---------------IVAMNIVLNGGDPDYVAL 649

Query: 621 LASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA-S 679
           L S   + P GN  SG      G   S++T+AFQ   +      ++  +   V  +IA +
Sbjct: 650 LPSGFAILPDGNANSG---APGGDGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACT 706

Query: 680 VQRVALALS 688
           V+R+  ++S
Sbjct: 707 VERIKASMS 715



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R+QL RE     N+EP Q+K WFQN+R + K  
Sbjct: 67  RYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSREL----NLEPLQVKFWFQNKRTQMKNH 122

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E S L+A N KL   N
Sbjct: 123 HERHENSHLRAENEKLRNDN 142


>gi|115480263|ref|NP_001063725.1| Os09g0526300 [Oryza sativa Japonica Group]
 gi|113631958|dbj|BAF25639.1| Os09g0526300, partial [Oryza sativa Japonica Group]
          Length = 131

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 8/86 (9%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 84
           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+E +Q+K WFQNRR + KQ 
Sbjct: 4   RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKQT 59

Query: 85  ---RKEASRLQAVNRKLTAMNKLLME 107
              R E + L+  N KL A N  + E
Sbjct: 60  QIERHENALLRQENDKLRAENMTIRE 85


>gi|345193173|tpg|DAA34952.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414886368|tpg|DAA62382.1| TPA: outer cell layer3 [Zea mays]
          Length = 863

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 29/135 (21%)

Query: 5   SSGGSRDSRDSGGQKMIMDNG-------KYVRYTPEQVEALERLYHECPKPSSMRRQQLI 57
           S  GS +   + G ++  DN        +Y R+TP+Q++ LE ++ ECP P   +R +L 
Sbjct: 95  SRSGSDNVDGASGDEIDPDNSNPRRKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELS 154

Query: 58  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS 117
           +      N+E +Q+K WFQNRR + K + E              N LL +END+L+    
Sbjct: 155 KRL----NLESRQVKFWFQNRRTQMKTQIERHE-----------NALLRQENDKLRA--- 196

Query: 118 QLVYENTFFRQQTQN 132
               EN   R+  +N
Sbjct: 197 ----ENMTIREAMRN 207



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 24/187 (12%)

Query: 262 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN----------NTQNG 311
           SG+I+L++ +L   + L P R+   LR+     +G   V + S++          + QNG
Sbjct: 445 SGSIQLMHAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAILRPDGGHHHAQNG 504

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQ 371
                   ++   +LP+G +++    G S +  V H + +   V ++ RPL +S   +  
Sbjct: 505 ----GGAGYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDEAVVHQLYRPLLQSGQALGA 560

Query: 372 KTTMAALRHLRQ---ISQEVSQP-----SVTGWGRRPAALRALSQRLSRGFNEALNGFTD 423
           +  +A+L+   Q   I    S P     ++T  GRR  ++  L+QR++  F   +     
Sbjct: 561 RRWLASLQRQCQYLAILCSNSLPARDHAAITPVGRR--SMLKLAQRMTDNFCAGVCASAA 618

Query: 424 EGWSMLE 430
           + W  L+
Sbjct: 619 QKWRRLD 625


>gi|449485525|ref|XP_004157198.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 783

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 11/105 (10%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           SG   D+ D    K      KY R+TP Q++ LE  + ECP P   +R +L R       
Sbjct: 73  SGDDHDANDEQPPK----RKKYHRHTPHQIQELEIFFKECPHPDDKQRNELSRRL----G 124

Query: 66  IEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
           +E KQ+K WFQNRR + K   +R E + L+  N KL A N ++ +
Sbjct: 125 LETKQVKFWFQNRRTQMKTQIERHENAILKQENDKLRAENSVMKD 169



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 106/494 (21%), Positives = 190/494 (38%), Gaps = 77/494 (15%)

Query: 217 TGVAARACGLVGLDPTRVAEILKDRPSWYR--DC--RSVEVVNVLPTGSSGT----IELL 268
           T  A R   +V ++   + E L D   W     C        +V+ +G  GT    ++L+
Sbjct: 347 TTEATRDTTMVIINSLALVETLMDANRWAEMFPCLIARATTTDVISSGMGGTRNGALQLM 406

Query: 269 YMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPS 328
           + +L   + L P R    LR+     DG   V + S+    N  S      F   + LPS
Sbjct: 407 HAELRVLSPLVPVRTLKFLRFCKQHADGLWAVVDVSIGEGSNSNS------FSGCKRLPS 460

Query: 329 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ----- 383
           G +++    G S +  V+H + +   + ++ R L  S +    +  +A L+  RQ     
Sbjct: 461 GCVVQDMPNGFSKVTWVEHTEYDETVIHQLYRQLISSGSGFGSQRWLATLQ--RQCDCLA 518

Query: 384 ISQEVSQPSVTGWGRRPAALRA---LSQRLSRGFNEALNGFTDEGWSMLESDGI-DDVTV 439
           I    + P+    G  P+  R+   LSQR+   F   +   T   W  L    I +DV V
Sbjct: 519 ILMSSTIPTEDPAGISPSGRRSMLKLSQRMVDNFCSGVCSSTLHKWDKLVVGNISEDVKV 578

Query: 440 HVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADS 497
               S +             P     ++ + A+ +   V    L  FL++   RSEW   
Sbjct: 579 MARKSIND------------PGEPPGIVLSAATSVWMPVTQQRLFAFLQDECLRSEW--- 623

Query: 498 SIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM 557
            I + S   ++     L + ++     +V L  A+ +   E    I  E        ++ 
Sbjct: 624 DILSNSRPMLEM----LRISKSQGPDNRVSLLCANPMNANENTMFILQETWTDVSGSLV- 678

Query: 558 PSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNR 617
              +F     + VD ++V     LV    D+++     ++PSGF I+P+D      +   
Sbjct: 679 ---VF-----APVDTSSV----NLVMRGGDSAY---VSLLPSGFAILPIDQSNYACTNGE 723

Query: 618 TLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGII 677
              + S++  G  G                ++T+AFQ          +   + + V  +I
Sbjct: 724 DATVKSSINSGHGG--------------ACLLTVAFQILVNSLPTAKLTVESVETVNHLI 769

Query: 678 A-SVQRVALALSPS 690
           + ++Q++  AL  S
Sbjct: 770 SCTIQKIKTALQVS 783


>gi|449446049|ref|XP_004140784.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 783

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 11/105 (10%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           SG   D+ D    K      KY R+TP Q++ LE  + ECP P   +R +L R       
Sbjct: 73  SGDDHDANDEQPPK----RKKYHRHTPHQIQELEIFFKECPHPDDKQRNELSRRL----G 124

Query: 66  IEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
           +E KQ+K WFQNRR + K   +R E + L+  N KL A N ++ +
Sbjct: 125 LETKQVKFWFQNRRTQMKTQIERHENAILKQENDKLRAENSVMKD 169



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 106/494 (21%), Positives = 190/494 (38%), Gaps = 77/494 (15%)

Query: 217 TGVAARACGLVGLDPTRVAEILKDRPSWYR--DC--RSVEVVNVLPTGSSGT----IELL 268
           T  A R   +V ++   + E L D   W     C        +V+ +G  GT    ++L+
Sbjct: 347 TTEATRDTTMVIINSLALVETLMDANRWAEMFPCLIARATTTDVISSGMGGTRNGALQLM 406

Query: 269 YMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPS 328
           + +L   + L P R    LR+     DG   V + S+    N  S      F   + LPS
Sbjct: 407 HAELRVLSPLVPVRTLKFLRFCKQHADGLWAVVDVSIGEGSNSNS------FSGCKRLPS 460

Query: 329 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ----- 383
           G +++    G S +  V+H + +   + ++ R L  S +    +  +A L+  RQ     
Sbjct: 461 GCVVQDMPNGFSKVTWVEHTEYDETVIHQLYRQLISSGSGFGSQRWLATLQ--RQCDCLA 518

Query: 384 ISQEVSQPSVTGWGRRPAALRA---LSQRLSRGFNEALNGFTDEGWSMLESDGI-DDVTV 439
           I    + P+    G  P+  R+   LSQR+   F   +   T   W  L    I +DV V
Sbjct: 519 ILMSSTIPTEDPAGISPSGRRSMLKLSQRMVDNFCSGVCSSTLHKWDKLVVGNISEDVKV 578

Query: 440 HVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADS 497
               S +             P     ++ + A+ +   V    L  FL++   RSEW   
Sbjct: 579 MARKSIND------------PGEPPGIVLSAATSVWMPVTQQRLFAFLQDECLRSEW--- 623

Query: 498 SIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM 557
            I + S   ++     L + ++     +V L  A+ +   E    I  E        ++ 
Sbjct: 624 DILSNSRPMLEM----LRISKSQGPDNRVSLLCANPMNANENTMFILQETWTDVSGSLV- 678

Query: 558 PSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNR 617
              +F     + VD ++V     LV    D+++     ++PSGF I+P+D      +   
Sbjct: 679 ---VF-----APVDTSSV----NLVMRGGDSAY---VSLLPSGFAILPIDQSNYACTNGE 723

Query: 618 TLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGII 677
              + S++  G  G                ++T+AFQ          +   + + V  +I
Sbjct: 724 DATVKSSINSGHGG--------------ACLLTVAFQILVNSLPTAKLTVESVETVNHLI 769

Query: 678 A-SVQRVALALSPS 690
           + ++Q++  AL  S
Sbjct: 770 SCTIQKIKAALQVS 783


>gi|115483622|ref|NP_001065481.1| Os10g0575600 [Oryza sativa Japonica Group]
 gi|122248972|sp|Q336P2.1|ROC3_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC3; AltName:
           Full=GLABRA 2-like homeobox protein 3; AltName:
           Full=HD-ZIP protein ROC3; AltName: Full=Homeodomain
           transcription factor ROC3; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 3
 gi|78709045|gb|ABB48020.1| OCL4 protein, putative, expressed [Oryza sativa Japonica Group]
 gi|78709046|gb|ABB48021.1| OCL4 protein, putative, expressed [Oryza sativa Japonica Group]
 gi|113640013|dbj|BAF27318.1| Os10g0575600 [Oryza sativa Japonica Group]
          Length = 882

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 8/98 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 137 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 192

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           ++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 193 QD----RADNVILRAENENLKSDNFRLQAAIRNVVCPN 226



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 29/247 (11%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS---SGTIELLYMQLYAPTTLAPARDFW 285
           LD  +  E+    PS     R+++++N         SGT+ L+  ++   + L  AR+  
Sbjct: 426 LDANKWMELF---PSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAREVV 482

Query: 286 LLRY-TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHI 344
             RY     ++GS  + +      + G  + QA   VR    PSG +I+    G S +  
Sbjct: 483 FFRYCVHNADEGSWAIVDFPAEGFEEG--LLQA-SVVRCRRRPSGCIIQDMPNGYSRVVW 539

Query: 345 VDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL--------RQISQEVSQPSVTGW 396
           V+HM++     P  L+P++     +A      A R L        R  S+     +  G 
Sbjct: 540 VEHMEMVGEEKP--LQPVFRD--YVASGAAFGATRWLSILQRQCERLASELARNIADLGV 595

Query: 397 GRRPAA---LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD---VTVHVNSSPSKMMG 450
            R P A   +  LSQR+   F   ++    + W+ L SD   D   VT   N+ P +  G
Sbjct: 596 IRTPEARTNMMKLSQRMITTFCANISASGTQSWTAL-SDSTQDTIRVTTRKNTEPGQPSG 654

Query: 451 VQLSYVN 457
           V L+ V+
Sbjct: 655 VILTAVS 661


>gi|242072358|ref|XP_002446115.1| hypothetical protein SORBIDRAFT_06g001940 [Sorghum bicolor]
 gi|241937298|gb|EES10443.1| hypothetical protein SORBIDRAFT_06g001940 [Sorghum bicolor]
          Length = 775

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 127/577 (22%), Positives = 204/577 (35%), Gaps = 102/577 (17%)

Query: 11  DSRDSGGQKMIMDNG----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           + + +GG++  ++NG    +  R+  EQ++ LE  + EC  P    R    RE      I
Sbjct: 39  NDKATGGEEHNINNGSSSKRSKRFNVEQLQQLESSFQECTHPDDAMR----RELAARVGI 94

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQ------------------------------AVNR 96
           E +Q+K WFQNRR + K    A   +                                N 
Sbjct: 95  ETRQVKFWFQNRRTQTKHSSAAGTAEDGSRALDAAAPALALTLALAAGAAAVKSYATENN 154

Query: 97  KLTAMNKLLMEENDRLQKQVS------------QLVYENTFFRQQTQNAATLAT------ 138
           K    N  L+ EN  L K+++            QL+ EN   ++  Q A    T      
Sbjct: 155 KFRQQNADLLAENMELHKELTCSRCRDPTAEKWQLLDENAKLKEMCQRANADLTKLIQAA 214

Query: 139 ----TDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 194
               + T  +  + +  + L+    +     +     LLS AE  + EF   A      W
Sbjct: 215 DRPPSVTPEDLALVTSMNPLSSNVGNSSSSTNNLQVTLLSYAECAIKEFDILARNGPPLW 274

Query: 195 VQMPGMK----------PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSW 244
           + + G              P   GI     G    A R   LV    + +  IL + P W
Sbjct: 275 LPIIGGNMLNIQEYTRLRFPRLHGICP--QGFVVEATRDTALVRGTASDLLGILTNVPRW 332

Query: 245 Y----------RDCRSVEVVNVLPTGSSGTIELLYMQ--LYAPTTLAPARDFWLLRYTSV 292
           +          RD  +V    +  +G+    ELL +   L   +   P R    LR +  
Sbjct: 333 FETFPGIVAAVRDYHNVS-SGIFGSGNGLIQELLQINVDLSVESPCPPLRSMKFLRISMQ 391

Query: 293 LEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEP 352
             +G   V + S+N      +  +  H     +LPSG LI+    G   +  + H +   
Sbjct: 392 TANGDFAVVDVSINGVHEQEAGSKNKH-TSCRLLPSGCLIQDMGDGHCQVTWIVHAEYNE 450

Query: 353 WSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQPSVTGWGRRPAALRA------ 405
             VP + R  + S         +A+L RH    +   S    TG G     + A      
Sbjct: 451 TIVPPIFRQFFGSGQAFGASRWLASLKRHCEYKAVMHSSQVPTGGGLGVVTISALGRWNL 510

Query: 406 --LSQRLSRGFNEALNGF-TDEGWSMLESDGIDDVTVHVNSSPSKMM---GVQLSYVNGF 459
             L+QR+   F +  +   T E  +++   G    +      P+  M      L  +NG 
Sbjct: 511 LDLAQRMMAIFYKTTSAMATVEPGTIVTMFGGRRGSAGEMVEPAVRMVLGNYYLGAMNGE 570

Query: 460 PSMSNAVLCAKASMLLQDVPPAILLRFL--REHRSEW 494
           P+    VL A  ++ L   PP  +  +L   + R EW
Sbjct: 571 PTFIK-VLSATTTVWLPGTPPEHVFNYLCNGQRRGEW 606


>gi|326523973|dbj|BAJ96997.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 774

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 15/109 (13%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D  D           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+
Sbjct: 28  GASGDDLDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NL 83

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQ 115
           E +Q+K WFQNRR + K + E              N LL +END+L+ +
Sbjct: 84  ESRQVKFWFQNRRTQMKTQIERHE-----------NALLRQENDKLRTE 121



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 167/422 (39%), Gaps = 74/422 (17%)

Query: 262 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT---QNGPSMPQAP 318
           SG+I+L+  +L   + L P R+   LR+     DG   + + S++      +G       
Sbjct: 359 SGSIQLMRAELQVLSPLVPIREVTFLRFCKQHADGLWAIVDVSVDGVLRPDSGAGGAGPA 418

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
            ++   +LPSG ++   + G + +  V H + +  +V E+ RPL  S   +  +  +A+L
Sbjct: 419 GYMGCRLLPSGCIVEDMQNGYAKVTWVVHAEYDEAAVHELYRPLLRSGQALGARRWLASL 478

Query: 379 -RHLRQISQEVSQP---------SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSM 428
            R     +   S P         +++  GRR   +  L+QR++  F   +     + W  
Sbjct: 479 QRQCEYHAILCSNPHPNHGDRHEAISPAGRR--CMLRLAQRMADNFCAGVCATAAQKWRR 536

Query: 429 LESDGIDDVTVHVNSSPS----KMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILL 484
           L+   ++       +S      +MM  Q     G P     VL A  S+ L    P  + 
Sbjct: 537 LDEWRVEGAGGREQASGGEDKVRMMARQSVGAPGEP--PGVVLSATTSVRLPGTSPQRVF 594

Query: 485 RFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEV 542
            +LR+   R EW    I A   A                   Q +  +A    H   + +
Sbjct: 595 DYLRDEQRRGEW---DILANGEAM------------------QEMDHIAKGQHHGNAVSL 633

Query: 543 IKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDA-------SFSDDA- 594
           ++    +  + +M++     L + C+    +A G+   +V+AP+D           D A 
Sbjct: 634 LRPNATSGNQNNMLI-----LQETCT----DASGSL--VVYAPVDVQSMHVVMGGGDSAY 682

Query: 595 -PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAF 653
             ++PSGF I+P            T+  A+ L+  P G+           +  S++T+AF
Sbjct: 683 VSLLPSGFAILP---------DGHTMQ-AAPLDPSPQGSSPIAHGGGSNNNPGSLVTVAF 732

Query: 654 QF 655
           Q 
Sbjct: 733 QI 734


>gi|187611428|sp|A2ZAI7.2|ROC3_ORYSI RecName: Full=Homeobox-leucine zipper protein ROC3; AltName:
           Full=GLABR 2-like homeobox protein 3; AltName:
           Full=HD-ZIP protein ROC3; AltName: Full=Homeodomain
           transcription factor ROC3; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 3
          Length = 882

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 8/98 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 137 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 192

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           ++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 193 QD----RADNVILRAENENLKSDNFRLQAAIRNVVCPN 226



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 29/247 (11%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS---SGTIELLYMQLYAPTTLAPARDFW 285
           LD  +  E+    PS     R+++++N         SGT+ L+  ++   + L  AR+  
Sbjct: 426 LDANKWMELF---PSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAREVV 482

Query: 286 LLRY-TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHI 344
             RY     ++GS  + +      + G  + QA   VR    PSG +I+    G S +  
Sbjct: 483 FFRYCVHNADEGSWAIVDFPAEGFEEG--LLQA-SVVRCRRRPSGCIIQDMPNGYSRVVW 539

Query: 345 VDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL--------RQISQEVSQPSVTGW 396
           V+HM++     P  L+P++     +A      A R L        R  S+     +  G 
Sbjct: 540 VEHMEMVGEEKP--LQPVFRD--YVASGAAFGATRWLSILQRQCERLASELARNIADLGV 595

Query: 397 GRRPAA---LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD---VTVHVNSSPSKMMG 450
            R P A   +  LSQR+   F   ++    + W+ L SD   D   VT   N+ P +  G
Sbjct: 596 IRTPEARTNMMKLSQRMITTFCANISASGTQSWTAL-SDSTQDTIRVTTRKNTEPGQPSG 654

Query: 451 VQLSYVN 457
           V L+ V+
Sbjct: 655 VILTAVS 661


>gi|224136964|ref|XP_002322460.1| predicted protein [Populus trichocarpa]
 gi|222869456|gb|EEF06587.1| predicted protein [Populus trichocarpa]
          Length = 748

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 9/104 (8%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S + +D+G  +      KY R+T  Q++ LE  + ECP P   +R +L R       +
Sbjct: 38  GASGEDQDAGDYQR--PRKKYNRHTANQIQELESFFKECPHPDEKQRSELSRRL----GL 91

Query: 67  EPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
           E KQIK WFQNRR + K   +R E + L+  N KL A N+LL +
Sbjct: 92  ESKQIKFWFQNRRTQMKTQLERHENAILRQENDKLRAENELLKQ 135



 Score = 47.0 bits (110), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 60/292 (20%), Positives = 117/292 (40%), Gaps = 32/292 (10%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIELLYMQ 271
           A R  G+V  +   + E L D   W     S+      ++++ +G     SG +++++ +
Sbjct: 312 ATRESGVVLANSLDLVETLMDVNGWVEMFPSLIARAATIDIVSSGMGGTKSGALQMIHAE 371

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
               +   P R    LR    L +G   V + S++  Q   +  Q P  V    LPSG +
Sbjct: 372 FQVISPFVPVRQVKFLRLCKQLAEGVWAVADVSVDGNQENLN-AQTP--VTCRRLPSGCI 428

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQP 391
           I+    G   +  V+H + +  +V  + R +  S      +  +AAL+   +    +  P
Sbjct: 429 IQDMNNGCCKVTWVEHSEYDESAVHRLYRHILNSGMGFGAQRWIAALQRHYECMAMLLSP 488

Query: 392 SVTG-------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS 444
           ++ G        G + + L+ L++R+   F   +   T   W  L           V  S
Sbjct: 489 TILGEDQTVINLGGKKSMLK-LARRMVDSFCSGVCASTLHNWGNL-----------VVES 536

Query: 445 PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
            S+ + +    +   P   + ++ + ++ +   V    L  FLR+   RS+W
Sbjct: 537 VSEDVRILTRKIINEPGEPDGIVLSVSTSVWLPVSQQRLFDFLRDEQSRSQW 588


>gi|15220448|ref|NP_172015.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|30679181|ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|334182300|ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|75332091|sp|Q94C37.1|HDG2_ARATH RecName: Full=Homeobox-leucine zipper protein HDG2; AltName:
           Full=HD-ZIP protein HDG2; AltName: Full=Homeodomain
           GLABRA 2-like protein 2; AltName: Full=Homeodomain
           transcription factor HDG2; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 2
 gi|14334996|gb|AAK59762.1| At1g05230/YUP8H12_16 [Arabidopsis thaliana]
 gi|20147145|gb|AAM10289.1| At1g05230/YUP8H12_16 [Arabidopsis thaliana]
 gi|222423025|dbj|BAH19495.1| AT1G05230 [Arabidopsis thaliana]
 gi|332189688|gb|AEE27809.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189689|gb|AEE27810.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189691|gb|AEE27812.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
          Length = 721

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R+QL RE     N+EP Q+K WFQN+R + K  
Sbjct: 67  RYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSREL----NLEPLQVKFWFQNKRTQMKNH 122

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E S L+A N KL   N
Sbjct: 123 HERHENSHLRAENEKLRNDN 142



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 105/489 (21%), Positives = 189/489 (38%), Gaps = 91/489 (18%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRD----CRSVEVVNVLPTGSSGT----IELLYMQ 271
           A+R   +V ++   + EIL D   W             + VL TG +G     ++++  +
Sbjct: 300 ASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAE 359

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
              P+ L P R+ +  RY     DGS  V + SL++ Q     P  P   R     SG L
Sbjct: 360 FQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQ-----PNPP--ARCRRRASGCL 412

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQ 390
           I+    G S +  V+H++++   V  + + +  +      K  +A L R   +++  ++ 
Sbjct: 413 IQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMAT 472

Query: 391 PSVTG--------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN 442
              +G         GRR  ++  L++R+   F   ++  T   W+ L   G +DV V   
Sbjct: 473 NISSGEVGVITNQEGRR--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGAEDVRVMTR 530

Query: 443 SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSID 500
            S               P     ++ + A+     VPP  +  FLR+   R+EW     D
Sbjct: 531 KSVDD------------PGRPPGIVLSAATSFWIPVPPKRVFDFLRDENSRNEW-----D 573

Query: 501 AYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSD 560
             S                    G V+  +AH     +    + L  +          S+
Sbjct: 574 ILS-------------------NGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQ---SN 611

Query: 561 IFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLD 620
           + +LQ  S  D  A    + +++AP+D               I+ ++   +   P+    
Sbjct: 612 MLILQE-SCTDPTA----SFVIYAPVD---------------IVAMNIVLNGGDPDYVAL 651

Query: 621 LASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIA-S 679
           L S   + P GN  SG      G   S++T+AFQ   +      ++  +   V  +IA +
Sbjct: 652 LPSGFAILPDGNANSG---APGGDGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACT 708

Query: 680 VQRVALALS 688
           V+R+  ++S
Sbjct: 709 VERIKASMS 717


>gi|357485047|ref|XP_003612811.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
 gi|355514146|gb|AES95769.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
          Length = 801

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 15/130 (11%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDN-------GKYVRYTPEQVEALERLYHECPKPSSMRR 53
           +M  S  GS    D  G +  ++N        +Y R+T  Q++ +E L+ ECP P   +R
Sbjct: 60  IMDQSGSGSEQVEDKSGNEQEINNEQQATKKKRYHRHTARQIQEMEALFKECPHPDDKQR 119

Query: 54  QQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQ 113
            +L  +      ++P+Q+K WFQNRR + K +++ S     N  L A N+ L  EN RLQ
Sbjct: 120 LKLSHDL----GLKPRQVKFWFQNRRTQMKAQQDRSD----NVILRAENESLKNENYRLQ 171

Query: 114 KQVSQLVYEN 123
             +  ++  N
Sbjct: 172 SALRNILCPN 181


>gi|194697640|gb|ACF82904.1| unknown [Zea mays]
          Length = 272

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 13/160 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 132

Query: 86  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT--TD 140
           +   +  RL+A    L A ++ L+ +ND L+ QV  L        ++T  +AT A    D
Sbjct: 133 QLETDYDRLKAAYDALAADHQGLLADNDNLRAQVISLT--EKLQGKETYPSATTAAQEVD 190

Query: 141 TSCESVVTSGQHHLTPQQ--QHQHPPRDASPAGLLSIAEE 178
              E    SG   L  QQ   + H   D +  G LS  E+
Sbjct: 191 QPDEHTAVSGTEELLAQQLKDNLHSSGDCTGHGTLSSEED 230


>gi|115467006|ref|NP_001057102.1| Os06g0208100 [Oryza sativa Japonica Group]
 gi|31339109|dbj|BAC77161.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113595142|dbj|BAF19016.1| Os06g0208100, partial [Oryza sativa Japonica Group]
          Length = 129

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 4   RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 59

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R +   L+A N K+   N  + E
Sbjct: 60  HERADNCFLRAENDKIRCENIAIRE 84


>gi|357448567|ref|XP_003594559.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483607|gb|AES64810.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 699

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 124/595 (20%), Positives = 217/595 (36%), Gaps = 126/595 (21%)

Query: 7   GGSRDSRDSGGQKMIMDNGK---YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPIL 63
           GGS    +  G     D+G+   + R T  Q   L+    EC  P    R QL  E    
Sbjct: 7   GGSESGEEVNGN--FRDDGEKSSHKRLTSAQTSILKNFMKECHHPDEAERHQLAVEV--- 61

Query: 64  SNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRL----------- 112
             +EPKQIK WFQN+R   K + E    +  N  L   N  +  EN ++           
Sbjct: 62  -GLEPKQIKFWFQNKRTLLKHQHE----RETNGTLRRENDKIRNENLKIKEVLKAKICLD 116

Query: 113 -----------QKQVSQLVYENTFFRQQTQNAATLATT---------------------- 139
                      Q  V  L  EN   +Q+ +  ++L  +                      
Sbjct: 117 CGGPPFPMKDHQNFVQDLKQENAQLKQECEKMSSLLASYMEKKISRPEFEQALKSIKSFS 176

Query: 140 -DTSCESVVT------SGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAV 192
            D  C S V        G    T  Q +     DA    +  + +  + E +        
Sbjct: 177 RDYECSSHVHGNLATWGGVLGQTSTQNY-----DAQKITMSQVVDAAMDELVRLVRVNEP 231

Query: 193 EWVQMPGMKPG-----PDSIGIVAISHGCTGV-----AARACGLVGLDPTRVAEILKDRP 242
            WV+ P  + G          +   ++   G      +++  GLV +    +  +  D  
Sbjct: 232 FWVKSPNTQDGYTFHRESYEQVFPKNNHFKGANVCEESSKYSGLVKISGIDLVGMFLDSV 291

Query: 243 SWYRDCRSV----EVVNVLPTGS----SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLE 294
            W     ++    E + V   GS     G + L+  +++  + L   R+F ++RY    +
Sbjct: 292 KWTNLFPTIVTKAETIKVFEIGSPGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKFD 351

Query: 295 DGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLE-PW 353
            G  V+ + S ++     S P      R    PSG +IR    GG ++  V+H+++E   
Sbjct: 352 AGVWVIADVSFDS-----SRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKI 406

Query: 354 SVPEVLRPLYESSTLIAQKTTMAALRHL--RQISQEVSQPSV--------TGWGRRPAAL 403
               V R L  +  L   ++ +  L+ +  R +   V    V        T  GR   ++
Sbjct: 407 HTHYVYRDLVGNYNLYGAESWIKELQRMCERSLGSYVEAIPVEETIGVIQTLEGRN--SV 464

Query: 404 RALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSY---VNGFP 460
             L+QR+ + F E+L        +M     ++ +T+      + + G+++S+    +   
Sbjct: 465 IKLAQRMVKMFCESL--------TMPGQLELNHLTL------ASIGGIRVSFRSTTDDDT 510

Query: 461 SMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEWADSSID--AYSAAAVKAGP 511
           S  N  +   A+ L   +P   +  FL++   RS+W   S     +  A +  GP
Sbjct: 511 SQPNGTIVTAATTLWLPLPALKVFEFLKDPTKRSQWDGLSCGNPMHEIAHISNGP 565


>gi|302807022|ref|XP_002985242.1| hypothetical protein SELMODRAFT_234698 [Selaginella moellendorffii]
 gi|300147070|gb|EFJ13736.1| hypothetical protein SELMODRAFT_234698 [Selaginella moellendorffii]
          Length = 695

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 27/133 (20%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T +Q   LE  + ECP P   +RQ+L RE      +EP+Q+K WFQNRR + K  
Sbjct: 21  RYHRHTVQQTRQLEMFFKECPHPDEKQRQELGREL----GLEPRQVKFWFQNRRTQMKAH 76

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
            E            A N +L  EN+ L+        EN   R+  ++A+        C  
Sbjct: 77  HE-----------RADNSILRAENENLRT-------ENIALREALKDASC-----PKCGG 113

Query: 146 VVTSGQHHLTPQQ 158
            +T G+   T QQ
Sbjct: 114 QLTPGEMSFTEQQ 126



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 139/344 (40%), Gaps = 44/344 (12%)

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
           LL +A ET     S   GT     Q    +  P  +G   +  G    A+R  GLV ++ 
Sbjct: 209 LLLVAAETDGALWSSVDGTKEVLSQEEYFRQFPRGLGPRLM--GMETEASRETGLVMMNA 266

Query: 232 TRVAEILKDRPSWYRDCRSVE----VVNVLPTGSSGT----IELLYMQLYAPTTLAPARD 283
             + + + +   W     ++        VL TG  G     ++LLY +L   + L P R+
Sbjct: 267 AGLIDTIMNVGRWVDMFSNIVSRAFTTQVLTTGVGGNWNNALQLLYAELQILSPLVPTRE 326

Query: 284 FWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIH 343
           F+ LRY     +    + + S++  ++ P+ PQ    +R  M PSG+ I   + G S + 
Sbjct: 327 FFFLRYCKQHSERVWAIVDVSIDGLRDNPA-PQ----LRCRMRPSGFFIEDLQNGYSKVT 381

Query: 344 IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-------ISQEVSQPSV--- 393
            V H++ +      +   L  S      K  +A L+  RQ       ++  +S   +   
Sbjct: 382 AVQHIEADHRQTENIYHGLMCSGAAFGAKRWLAILQ--RQCERLGIMLTNNISARDLGVI 439

Query: 394 -TGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQ 452
               GRR  ++  L+QR++  +   ++      W+ L   G +D+ V    S        
Sbjct: 440 PNANGRR--SMLFLAQRMTSNYCAGVSASIVHTWTTLSGAGEEDIRVMTRKS-------- 489

Query: 453 LSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
              VN  P     ++ + A+ L   V    L  FLR+   RSEW
Sbjct: 490 ---VNN-PGEPPGIVLSAATSLWVPVNSQRLFEFLRDERLRSEW 529


>gi|357147560|ref|XP_003574393.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Brachypodium
           distachyon]
          Length = 888

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 8/95 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 128 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 183

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           ++    +A N  L A N+ L  +N RLQ  +  +V
Sbjct: 184 QD----RADNVILRAENESLKTDNFRLQAALRNVV 214



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 24/247 (9%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVV-NVLPTG--SSGTIELLYMQLYAPTTLAPARDFW 285
           LD  +  E+    PS     R+++V+ N   +G  +SG++ L+  ++   + L PAR+  
Sbjct: 446 LDANKWMELF---PSIVSKARTIQVIHNGAASGHLASGSLILMQAEVQFLSPLVPAREVV 502

Query: 286 LLRY-TSVLEDGSLVVCERSLNN--TQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSII 342
             RY     ++GS  + +   +           Q    VR    PSG +I+    G S +
Sbjct: 503 FFRYCVHNADEGSWSIVDFPADGFQDDLLQQQQQTSAVVRCRRRPSGCIIQDAPNGYSRV 562

Query: 343 HIVDHMDLEPWSVPEVLRPLYES-----STLIAQKTTMAALRHLRQISQEVSQP-SVTGW 396
             V+HM++     P  L+P+++      +   A +      R   +++ E+++  +  G 
Sbjct: 563 VWVEHMEVVGDEKP--LQPVFKDHVAGGAAFGATRWVAVLQRQCERLASELARNIADQGV 620

Query: 397 GRRPAA---LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD---VTVHVNSSPSKMMG 450
            R P A   +  LSQR+   F   ++    + W+ L SD  +D   VT   N+ P +  G
Sbjct: 621 IRTPEARTNMMRLSQRMITAFCANISASGSQSWTAL-SDSTEDTIRVTTRKNTEPGQPSG 679

Query: 451 VQLSYVN 457
           V L+ V+
Sbjct: 680 VILTAVS 686


>gi|357139585|ref|XP_003571361.1| PREDICTED: homeobox-leucine zipper protein ROC7-like [Brachypodium
           distachyon]
          Length = 817

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ LE  + ECP P   +R++L R    + N+EP Q+K WFQN+R + K  
Sbjct: 132 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSR----MLNLEPLQVKFWFQNKRTQIKTQ 187

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R+E + L+  N KL A N
Sbjct: 188 HERQENTALRTENEKLRAEN 207



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 185/479 (38%), Gaps = 105/479 (21%)

Query: 169 PAGLLSIAEETLTEFLSKATGTAVEWVQM-PGMKPGPDSIGIVAISHGCTGVAARACGLV 227
           P+  LS+  ETL E          E+ ++ PG      S    A +H     A+R  G+V
Sbjct: 331 PSSSLSVGGETLVE---------EEYSRLFPGKHSSSSSSPAPAENHPPRSEASRETGVV 381

Query: 228 GLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGTIE----LLYMQLYAPTTLA 279
            +D   +  IL D   W     S+      + VL TG +G ++    L+  +L  P+ L 
Sbjct: 382 IMDQATLVSILMDVHQWSSVFSSIVSRAATLEVLSTGVAGNLDGALQLMSAELQVPSPLV 441

Query: 280 PARDFWL-LRYTS-----VLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIR 333
           P R+  L LRY           G+  V + SL+N+    ++ +     RA    SG +I+
Sbjct: 442 PTRELPLFLRYCKHHPHGAGGAGTWAVVDVSLDNSGRNSNIRR-----RA----SGCVIQ 492

Query: 334 PCEGGGSIIHIVDHMDLEPWS------VPEVLRPLYESSTLIAQKTTMAALRHLRQISQE 387
               G S +  ++H +L   +      V E+ +PL  S T    +  ++ L+  RQ  + 
Sbjct: 493 EMPNGYSKVTWIEHTELPAAASAADSMVHELYKPLVASGTAFGARRWVSTLK--RQCERL 550

Query: 388 VS-----QPS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
            S      PS     VT    R + LR L++R++  F   +       W+ L   G  DV
Sbjct: 551 ASAAMSVHPSSADSVVTSAEGRRSMLR-LAERMTASFCGGVAASATHQWTTLSGSGEADV 609

Query: 438 TVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWA 495
            V    S               P     ++   A+     V PA +  FLR+   RSEW 
Sbjct: 610 RVMTRKSVDD------------PGRPPGIILNAATSFWLPVSPAEVFAFLRDDSTRSEW- 656

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDM 555
               D  S                    G V+  +AH    +     + L  + +   + 
Sbjct: 657 ----DILS-------------------NGGVVHEMAHIANGQNHGNAVSLLRVNNANANQ 693

Query: 556 IMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIP 605
              S++ +LQ  S  +E   G  + +V+AP+D             D   ++PSGF I+P
Sbjct: 694 ---SNMLILQESSTDEE---GGWSYVVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 746


>gi|302783435|ref|XP_002973490.1| hypothetical protein SELMODRAFT_450557 [Selaginella moellendorffii]
 gi|300158528|gb|EFJ25150.1| hypothetical protein SELMODRAFT_450557 [Selaginella moellendorffii]
          Length = 684

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 37/228 (16%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           ++ R+T  Q++ +E ++ ECP P   +R QL RE      +EP+Q+K WFQNRR + K  
Sbjct: 74  RFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSREL----GLEPRQVKFWFQNRRTQMKVS 129

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
            +       +++  A N +L  EN+RL+        EN   R+  +NA     T   C  
Sbjct: 130 IKVFEENQAHQE-RAENSMLRAENERLRS-------ENIAMREALKNA-----TCPHCGG 176

Query: 146 VVTSGQHHLTPQQ---QHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV----QMP 198
             T G+     QQ   ++ H   +     + S+A     ++LSK  G A   +     +P
Sbjct: 177 PATLGEMSYDEQQLRIENAHLKDEVQLDRVSSLA----AKYLSKPGGGAPHGLSVQTSLP 232

Query: 199 G--MKP-----GPDSIGIVAISHGCT--GVAARACGLVGLDPTRVAEI 237
           G  + P     GP S   +A++ G +   +A R  GL  ++   VAE+
Sbjct: 233 GTSLDPSAAAFGPQSNSALAVTPGPSMLELATRPGGLSQVEKPLVAEL 280



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 134/339 (39%), Gaps = 57/339 (16%)

Query: 180 LTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILK 239
           L E  +K +    E++Q      GP  +G+ A          R  GLV ++   + + + 
Sbjct: 301 LEENGAKESLNGEEYMQQFSRGLGPTPVGLKA-------EVTRDTGLVMMNGAALVDTIM 353

Query: 240 DRPSWYRDCRSVEVV-----NVLPTGSSGTIE-----LLYMQLYAPTTLAPARDFWLLRY 289
           D  + + D  S  +       VL TG  G        ++Y +    + L P R+ + LRY
Sbjct: 354 D--ARWMDMFSCIISRALTSEVLSTGVGGNWNNALQLVMYAEFQVLSPLVPTREAYFLRY 411

Query: 290 TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG------GSIIH 343
                +G   + + S++  +  P     P  +R  + PSG+LI+    G      G  + 
Sbjct: 412 CKQHAEGVWAIVDVSVDGLRENP-----PPQLRNRLRPSGFLIQDMPNGYSKVSHGFQVT 466

Query: 344 IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-------ISQEVSQPSVTGW 396
           I+ HM+ +   V  + R L  S      K  +A L+  RQ       ++  +S   + G 
Sbjct: 467 ILQHMEYDDRQVNNMYRGLVSSGLAFGAKRWLATLQ--RQCERLAVLLATNISPRDLGGI 524

Query: 397 ----GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQ 452
               GRR  ++  L+QR++  F   ++  T   W+ L   G DDV V    S        
Sbjct: 525 SNATGRR--SMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVMTRKSIDN----- 577

Query: 453 LSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHR 491
                  P     ++ + A+ L   V P  +  FLR+ R
Sbjct: 578 -------PGEPPGIVLSAATSLWMPVSPQRVFEFLRDDR 609


>gi|255541474|ref|XP_002511801.1| homeobox protein, putative [Ricinus communis]
 gi|223548981|gb|EEF50470.1| homeobox protein, putative [Ricinus communis]
          Length = 825

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 96/417 (23%), Positives = 168/417 (40%), Gaps = 82/417 (19%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----IELLYMQ 271
           A+R  G+V ++   + E L D   W      V       +V+ +G  GT    ++L++ +
Sbjct: 387 ASREAGMVIINSLALVETLMDSNRWAEMFPCVIARTSTTDVISSGMGGTRNGSLQLMHAE 446

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   + L P R+   LR+     +G   V + S++  +        P F     LPSG +
Sbjct: 447 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG---GPAFANCRRLPSGCV 503

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-----ISQ 386
           ++    G S +  V+H + +   + ++ RPL  S      +  +A L+  RQ     I  
Sbjct: 504 VQDMPNGYSKVTWVEHAEYDESPIHQLYRPLISSGMGFGAQRWVATLQ--RQCECLAILM 561

Query: 387 EVSQP------SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID-DVTV 439
             + P      ++T  GRR  ++  L+QR++  F   +   T   W+ L +  +D DV V
Sbjct: 562 SSTVPARDHTAAITASGRR--SMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRV 619

Query: 440 HVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADS 497
               S               P     ++ + A+ +   V P  L  FLR+   RSEW   
Sbjct: 620 MTRKSVDD------------PGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEW--- 664

Query: 498 SIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM 557
             D  S      GP             Q +  +A   +H   + +++   M   +  M++
Sbjct: 665 --DILS----NGGPM------------QEMAHIAKGQDHGNCVSLLRASAMNANQSSMLI 706

Query: 558 PSDIFLLQLCSGVDENAVGNCAELVFAPID-------ASFSDDA--PIIPSGFRIIP 605
                L + C     +A G+   +V+AP+D        +  D A   ++PSGF I+P
Sbjct: 707 -----LQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP 752



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 14/105 (13%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQL-IREC 60
           M  +SG  +D+ D+  +K      +Y R+TP+Q++ LE L+ ECP P   +R +L  R C
Sbjct: 106 MDGASGDDQDAADNPPRKK-----RYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLC 160

Query: 61  PILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMN 102
                +E +Q+K WFQNRR + K   +R E S L+  N KL A N
Sbjct: 161 -----LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 200


>gi|223973911|gb|ACN31143.1| unknown [Zea mays]
 gi|223974081|gb|ACN31228.1| unknown [Zea mays]
 gi|238011808|gb|ACR36939.1| unknown [Zea mays]
          Length = 330

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 7/116 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 74  KKRRLTPEQVLLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 129

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
              ++  RL+A    L A +  L+++N+RL+ QV  L  +       T+  AT  T
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNNRLRSQVVSLTEKLQEKEDATEGGATADT 185


>gi|195623632|gb|ACG33646.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|195624474|gb|ACG34067.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
          Length = 331

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 7/116 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 74  KKRRLTPEQVLLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 129

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
              ++  RL+A    L A +  L+++N+RL+ QV  L  +       T+  AT  T
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNNRLRSQVVSLTEKLQEKEDATEGGATADT 185


>gi|109729916|tpg|DAA05772.1| TPA_inf: class IV HD-Zip protein HDZ42 [Selaginella moellendorffii]
          Length = 694

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 27/133 (20%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T +Q   LE  + ECP P   +RQ+L RE      +EP+Q+K WFQNRR + K  
Sbjct: 21  RYHRHTVQQTRQLEMFFKECPHPDEKQRQELGREL----GLEPRQVKFWFQNRRTQMKAH 76

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
            E            A N +L  EN+ L+        EN   R+  ++A+        C  
Sbjct: 77  HE-----------RADNSILRAENENLRT-------ENIALREALKDASC-----PKCGG 113

Query: 146 VVTSGQHHLTPQQ 158
            +T G+   T QQ
Sbjct: 114 QLTPGEMSFTEQQ 126



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 139/344 (40%), Gaps = 45/344 (13%)

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
           LL +A ET     S   GT     Q    +  P  +G   +  G    A+R  GLV ++ 
Sbjct: 209 LLLVAAETDGALWSSVDGTKEVLSQEEYFRQFPRGLGPRLM--GMETEASRETGLVMMNA 266

Query: 232 TRVAEILKDRPSWYRDCRSVE----VVNVLPTGSSGT----IELLYMQLYAPTTLAPARD 283
             + + + +   W     ++        VL TG  G     ++LLY +L   + L P R+
Sbjct: 267 AGLIDTIMN-GRWVDMFSNIVSRAFTTQVLTTGVGGNWNNALQLLYAELQILSPLVPTRE 325

Query: 284 FWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIH 343
           F+ LRY     +    + + S++  ++ P+ PQ    +R  M PSG+ I   + G S + 
Sbjct: 326 FFFLRYCKQHSERVWAIVDVSIDGLRDNPA-PQ----LRCRMRPSGFFIEDLQNGYSKVT 380

Query: 344 IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-------ISQEVSQPSV--- 393
            V H++ +      +   L  S      K  +A L+  RQ       ++  +S   +   
Sbjct: 381 AVQHIEADHRQTENIYHGLVCSGAAFGAKRWLAILQ--RQCERLGIMLTNNISARDLGVI 438

Query: 394 -TGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQ 452
               GRR  ++  L+QR++  +   ++      W+ L   G +D+ V    S        
Sbjct: 439 PNANGRR--SMLFLAQRMTSNYCAGVSASIVHTWTTLSGAGEEDIRVMTRKS-------- 488

Query: 453 LSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
              VN  P     ++ + A+ L   V    L  FLR+   RSEW
Sbjct: 489 ---VNN-PGEPPGIVLSAATSLWVPVNSQRLFEFLRDERLRSEW 528


>gi|197116151|dbj|BAG68827.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 137/646 (21%), Positives = 240/646 (37%), Gaps = 135/646 (20%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 83
           R T  Q + LE  Y E P P+  +R +L +      N+   Q+K WFQN+R  EK     
Sbjct: 46  RRTAYQTQELENFYMENPHPTEEQRYELGQRL----NMGVNQVKNWFQNKRNLEKINNDH 101

Query: 84  -----QRKEASRLQAVNRKL-------------TAMN--------KLLMEENDRLQKQVS 117
                 R+E  RL A   +L              A N        + LM EN  L++++ 
Sbjct: 102 LENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENANLEREID 161

Query: 118 QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPR--DASPAGLLSI 175
           Q  + + +  +  Q    + +T     S  ++   + TP        R  +   +  L++
Sbjct: 162 Q--FNSRYLSRPKQR---MVSTSEQAPSSSSNPGINATPVLDFSGGTRTSEKETSIFLNL 216

Query: 176 AEETLTEFLSKATGTAVEWVQMPGMKPGP---------DSIGIVAISHGCTGVAARACGL 226
           A   L E ++        W+  P ++             S   V    G    A+RA GL
Sbjct: 217 AITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVTKPPGQIVEASRAKGL 276

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTL 278
           V +    + + L D   W      +  V     V+PTGS    SG+++ +  +    + L
Sbjct: 277 VPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVIPTGSGGTKSGSLQQIQAEFQVISPL 336

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
            P R    +RY   +  G  VV +  +  TQN   +P    +  ++ LPSG +I     G
Sbjct: 337 VPKRKVTFIRYCKEIRQGLWVVVD--VTPTQNPTLLP----YGCSKRLPSGLIIDDLSNG 390

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQIS-------QEVSQ 390
            S +  ++  +     + ++ +PL      +  K  +A L RH   +S        E+S 
Sbjct: 391 YSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLTEIS- 449

Query: 391 PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMG 450
           P ++  G     +  L+QR++  +   +   + + W            + V +    M  
Sbjct: 450 PGLSAKG--ATEIVKLAQRMTLNYYRGITSPSVDKWQ----------KIQVENVAQNMSF 497

Query: 451 VQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEWADSSIDAYSAAAVK 508
           +    VN    ++  VL A  S+ L  V    L  F+     R EW   + D      ++
Sbjct: 498 MIRKNVNEPGELTGIVLSASTSVWL-PVNQHTLFAFISHLSFRHEWDILTNDTTMEETIR 556

Query: 509 AGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 568
                                +     H   + ++K+ N       M++  +I+      
Sbjct: 557 ---------------------IQKAKRHVNIISLLKIVN-----NGMLVLQEIW------ 584

Query: 569 GVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRIIP 605
               +A G  A +V+AP++ +          SD    +PSGF I+P
Sbjct: 585 ---NDASG--AMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVP 625


>gi|224059096|ref|XP_002299713.1| predicted protein [Populus trichocarpa]
 gi|222846971|gb|EEE84518.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 166/417 (39%), Gaps = 87/417 (20%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR--DC--RSVEVVNVLPTGS----SGTIELLYMQ 271
           A+R  G+V +D  R+ +   D   W     C       V+V+  G     +G ++L++ +
Sbjct: 332 ASRETGVVFIDVPRLVQSFMDVDQWKEMFPCLISKAATVDVICNGEGASRNGAVQLMFAE 391

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           +   T + P R+ + +RY   L      + + S++  ++          V+    PSG +
Sbjct: 392 VQMLTPMVPTREVYFVRYCKQLNAEQWAIVDVSIDKVEDNID----ASLVKCRKRPSGCI 447

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLRQISQ 386
           I     G   +  V+H+  +  +V  + R +  S      +  MA L     R +  ++ 
Sbjct: 448 IEDKSNGHCKVIWVEHLQCQKSTVHTMYRTVVHSGLTFGARHWMATLQLQCERLVFFMAT 507

Query: 387 EVSQPSVTG----WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN 442
            V     TG     GR+  ++  L+QR++  F  A+   +   W+ + S   +D+ V   
Sbjct: 508 NVPTKDSTGVATLAGRK--SILKLAQRMTWSFCRAICASSYHTWNKVSSKTGEDIRVSSR 565

Query: 443 SS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADS 497
            +   P + +GV              +LCA +S+ L  V P IL  FLR+   R+EW   
Sbjct: 566 KNLNDPGEPVGV--------------ILCAVSSVWLP-VVPHILFDFLRDEARRNEW--- 607

Query: 498 SIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIM 557
             D  S      GP               +  +A+ I+ ++      +  M     +M +
Sbjct: 608 --DIMS----NGGP---------------VQTIANLIKGQDRGNAAAILKMKSKENNMWV 646

Query: 558 PSDIFLLQLCSGVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRIIP 605
             D      C+   E+ +      V+AP+D +          S +  I+PSGF I+P
Sbjct: 647 LQD-----SCTNAYESMI------VYAPVDTNGMQSVITGCDSSNLAILPSGFSILP 692



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 90
           T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K R  A +
Sbjct: 110 TAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKARTLAIQ 165

Query: 91  LQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTD 140
            +  N  L +    L E+N  +++ +++    N      +++AA  +T +
Sbjct: 166 ERHENSLLKSEMDKLREDNKSMRETINKACCPNCGTATTSRDAALTSTEE 215


>gi|22475197|gb|AAM97322.1| homeodomain protein GhHOX2 [Gossypium hirsutum]
          Length = 775

 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 8/102 (7%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           +   +Y R+T  Q++ LE ++ ECP P   +R +L +E      ++P+Q+K WFQNRR +
Sbjct: 86  LKKKRYHRHTAHQIQELEAVFKECPHPDDKQRMKLSQEL----GLKPRQVKFWFQNRRTQ 141

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
            K +++ S     N  L A N  L  E  RLQ ++S+LV  N
Sbjct: 142 MKAQQDRSE----NGILRAENDSLKSEFYRLQAELSKLVCPN 179



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 25/258 (9%)

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYT---SVLEDGSL 298
           PS     + V+V++   +G++G ++L+Y +L+  + L P R+ + LRY    +V ++   
Sbjct: 361 PSIVARAKCVQVISQGVSGTNGCLQLMYAELHVLSPLVPTREAYFLRYCQQQNVEDETYW 420

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
            + +  L+   N       P + R    PSG LI+    G S +  V+H ++E   + ++
Sbjct: 421 AIVDFPLDGFHNSLQT-SFPLYKRR---PSGCLIQDMPNGYSRVTWVEHAEIEEKPIHQI 476

Query: 359 LRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPA-----ALRALSQRLSRG 413
                 S         +A L    +    +   ++   G  P+      L  LSQR+ R 
Sbjct: 477 FSHFVHSGMAFGANRWLAVLERQCERVASLMATNIPDIGVIPSPEARKNLMRLSQRMIRT 536

Query: 414 FNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASM 473
           F   ++  + + W+ +  D  DD TV + +      G      NG       +LCA ++ 
Sbjct: 537 FCVNISSCSGQVWTAV-PDSTDD-TVRITTRKVSEAG----QPNGL------ILCAVSTT 584

Query: 474 LLQDVPPAILLRFLREHR 491
            L   P   +   LR+ R
Sbjct: 585 WL-PYPHHHVFDLLRDER 601


>gi|350539483|ref|NP_001234657.1| cutin deficient 2 [Solanum lycopersicum]
 gi|255529749|gb|ACU12849.1| cutin deficient 2 [Solanum lycopersicum]
          Length = 821

 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 12/106 (11%)

Query: 5   SSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILS 64
           +SG  +D+ D   +K      +Y R+TP+Q++ LE L+ ECP P   +R +L +      
Sbjct: 112 ASGDEQDATDKPPRKK-----RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL---- 162

Query: 65  NIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
           ++E +Q+K WFQNRR + K   +R E S L+  N KL A N  + E
Sbjct: 163 SLETRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRAENMSIRE 208



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 120/505 (23%), Positives = 201/505 (39%), Gaps = 112/505 (22%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR--DC--RSVEVVNVLPTGSSGT----IELLYMQ 271
           A+R  G+V ++   + E L D   W     C        +V+ +G  GT    ++L++ +
Sbjct: 388 ASRETGMVIINSLALVETLMDSNKWAEMFPCLIARTSTTDVISSGMGGTRNGALQLMHAE 447

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   + L P R+   LR+     +G   V + S++  +       AP F  +  LPSG +
Sbjct: 448 LQVLSPLVPIREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG---APTFPNSRRLPSGCV 504

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-------I 384
           ++    G S +  V+H + E  +   + R L  +      +  +A L+  RQ       +
Sbjct: 505 VQDMPNGYSKVTWVEHAEYEEGANHHLYRQLISAGMGFGAQRWVATLQ--RQCECLAILM 562

Query: 385 SQEVS---QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID-DVTVH 440
           S  VS     ++T  GRR  ++  L+QR++  F   +   T   W+ L +  +D DV V 
Sbjct: 563 SSTVSARDHTAITPSGRR--SMLKLAQRMTNNFCAGVCASTVHKWNKLCAGNVDEDVRVM 620

Query: 441 VNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWA 495
              S   P +  G+              VL A  S+ L  V P  L  FLR+   RSEW 
Sbjct: 621 TRKSVDDPGEPAGI--------------VLSAATSVWL-PVSPQRLFDFLRDERLRSEW- 664

Query: 496 DSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDM 555
               D  S      GP             Q +  +A   +H   + +++   M   +  M
Sbjct: 665 ----DILS----NGGPM------------QEMAHIAKGQDHGNCVSLLRASAMNANQSSM 704

Query: 556 IMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRII-- 604
           ++     L + C     +A G  A +V+AP+D            S    ++PSGF I+  
Sbjct: 705 LI-----LHETCI----DAAG--ALVVYAPVDIPAMHVVMNGGNSAYVALLPSGFSIVPD 753

Query: 605 -PLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQE 663
            P   G + PS N           G    + SG          S++T+AFQ         
Sbjct: 754 GPGSRGSNGPSCN-----------GGPDQRISG----------SLLTVAFQILVNSLPTA 792

Query: 664 NVASMARQYVRGIIA-SVQRVALAL 687
            +   + + V  +I+ +VQ++  AL
Sbjct: 793 KLTVESVETVNNLISCTVQKIKAAL 817


>gi|255574032|ref|XP_002527933.1| homeobox protein, putative [Ricinus communis]
 gi|223532666|gb|EEF34449.1| homeobox protein, putative [Ricinus communis]
          Length = 713

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 103/467 (22%), Positives = 186/467 (39%), Gaps = 106/467 (22%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTGS-SGTIELLYMQ 271
           A+R  G+V ++   + ++  D   W           + +EV++    GS SG++ L+Y +
Sbjct: 284 ASRDSGVVIMNSLALVDMFMDANKWVELFPTIVSISKPLEVISSGMMGSHSGSLHLMYEE 343

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   + L P R+F++LRY   +E G   +   S +       + Q     R+  LPSG L
Sbjct: 344 LQVLSPLVPTREFYILRYCQQIEQGLWAIVNVSYD-------IQQFSSQCRSHRLPSGCL 396

Query: 332 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTLIAQKTTMAALRHL--------- 381
           I+    G S +  V+H+++E  +    + R L  S      +  +A L+ +         
Sbjct: 397 IQDMPNGYSKVTWVEHVEVEDKNPTHRLYRDLIHSGMAFGAERWLATLQRMCERFACLMV 456

Query: 382 -----RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD 436
                R +   +  P     G+R  ++  L+QR++  F  +++      W+ +   G ++
Sbjct: 457 SGNLTRDLGGVIPSPD----GKR--SMMKLAQRMANSFCSSISTSNSHRWTAIS--GSNE 508

Query: 437 VTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRS--EW 494
           V V V+ S               P   N V+   A+     V P  +  F ++ R+  +W
Sbjct: 509 VGVRVHKSTD-------------PGQPNGVVLNAATTFWLPVSPQNVFNFFKDERTRAQW 555

Query: 495 ----ADSSID--AYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENM 548
               + +++   A+ A     G C + V RA N G   +L L                  
Sbjct: 556 DVLSSGNAVQEVAHIANGSHPGNC-ISVLRAFNSGQNNMLIL------------------ 596

Query: 549 AHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDS 608
               ++  + S   L+  C  VD  A+     +  +  D S+    P++PSGF I P D 
Sbjct: 597 ----QESCIDSSGSLVVYCP-VDLPAIN----IAMSGEDPSY---IPLLPSGFTICP-DG 643

Query: 609 GKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
             D                G   + +S    + C S+ S+IT++FQ 
Sbjct: 644 RPDH---------------GDGASTSSNAHGSMCRSSGSLITVSFQI 675



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  QV+ LE ++ ECP P   +R QL RE      +  +QIK WFQNRR + K  
Sbjct: 35  RYHRHTANQVQKLESMFKECPHPDEKQRLQLSREL----GLTQRQIKFWFQNRRTQMKAQ 90

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R +   L+A N K+   N  + E
Sbjct: 91  HERADNCALRAENDKIRCENIAIRE 115


>gi|147820899|emb|CAN60897.1| hypothetical protein VITISV_008020 [Vitis vinifera]
          Length = 461

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 24/154 (15%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M   +GG+    D  G         Y R+TP+Q++ LE  + +CP P   +R+QL RE  
Sbjct: 1   MEFRTGGNGSGGDQDGPNPRRGRKVYNRHTPQQIQRLEAFFKDCPHPDEAQRRQLGREL- 59

Query: 62  ILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME----------- 107
               +E +QIK WFQN+R + K   +R + + L+A N ++   N  + E           
Sbjct: 60  ---GLESRQIKFWFQNKRTQTKTQHERADNTALRAENERIQCENLAIREALKNVICPSCG 116

Query: 108 -----ENDRLQKQVSQLVYENTFFRQQTQNAATL 136
                E +R Q+ + +L  EN   +++ +  + L
Sbjct: 117 GPPFGEXER-QRNIEKLQLENAQLKEEHEKVSNL 149


>gi|449454863|ref|XP_004145173.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
 gi|449474595|ref|XP_004154226.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
 gi|449516709|ref|XP_004165389.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 696

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 134/320 (41%), Gaps = 45/320 (14%)

Query: 193 EWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRD-CRSV 251
           E+++    + GP  +G+       T  A+R   ++  +  ++  IL D   W    C  V
Sbjct: 246 EYLRTYSTRIGPRIVGL-------TSEASRQTSILAFNHLKLVHILMDVNQWSTIFCGIV 298

Query: 252 E---VVNVLPTG----SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERS 304
                + VL +G     +G ++++  +   P+ L P R+ + +RY     +GS  V + S
Sbjct: 299 SRALTLEVLSSGVGGDYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQQGEGSWAVVDVS 358

Query: 305 LNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYE 364
           L+  +  P+        R    PSG LI+    G S +  V+H++++  +V  + + +  
Sbjct: 359 LDYLRPTPTS-------RTRRRPSGCLIQELPNGYSKVTWVEHVEVDDRAVHSLYKGVVT 411

Query: 365 SSTLIAQKTTMAAL-RHLRQISQEVSQ--PS-----VTGWGRRPAALRALSQRLSRGFNE 416
                  K  MA L R  ++++   S   P+     VTG   R + ++ L++R+ R F  
Sbjct: 412 CGLAFGAKRWMATLGRQCQRLTNSSSTNIPALDICVVTGQEGRKSVMK-LAERMVRSFCS 470

Query: 417 ALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQ 476
            +   T   W+ L +   DDV V    S               P     ++   A+    
Sbjct: 471 GVGAATAHNWTTLSTIDSDDVRVMARKSLDD------------PGRPPGIVLNAATSFWI 518

Query: 477 DVPPAILLRFLREH--RSEW 494
            +PP  +  FLR+   R++W
Sbjct: 519 PIPPNRVFNFLRDQNTRNQW 538



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR---E 82
           +Y R+T  Q++ +E  + ECP P   +R+QL RE      +EP Q+K WFQN+R +   +
Sbjct: 21  RYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSREL----GLEPLQVKFWFQNKRTQIKAQ 76

Query: 83  KQRKEASRLQAVNRKLTAMN 102
           ++R E + L+A N KL A N
Sbjct: 77  QERHENAILKAQNEKLRAEN 96


>gi|414585328|tpg|DAA35899.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 830

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 8/99 (8%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D +D   Q+      +Y R+T  Q++ +E  + ECP P   +R++L RE  ++   
Sbjct: 94  GVSVDDQDDPNQRP-SKKKRYHRHTLHQIQEMEAFFKECPHPDDKQRKELSRELGLV--- 149

Query: 67  EPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMN 102
            P Q+K WFQN+R + K   +R+E S+L+A N KL A N
Sbjct: 150 -PLQVKFWFQNKRTQMKNQHERQENSQLRAENEKLRAEN 187



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 30/265 (11%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----I 265
           +G    A+R   +V +    + EIL D   +     S+      + VL TG +G     +
Sbjct: 360 YGFKSEASRDSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNGAL 419

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +++ ++   P+ L P RD + +RY     DG+  V + SL+ +            ++   
Sbjct: 420 QVMSVEFQVPSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDTSS----------VLKCRR 469

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQI 384
            PSG LI+    G S +  V+H++++  SV  + + L +S      +  +  L R   ++
Sbjct: 470 RPSGCLIQEMPNGYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERL 529

Query: 385 SQEVSQ--PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           +  ++   P+     +T    R + L+ L++R+   F   +       W+ L   G DDV
Sbjct: 530 ASVMASNIPTSDIGVITSTEGRKSMLK-LAERMVTSFCGGVTASAAHQWTTLSGSGADDV 588

Query: 438 TVHVNSS---PSKMMGVQLSYVNGF 459
            V    S   P +  G+ L+    F
Sbjct: 589 RVMTRKSVDDPGRPPGIVLNAATSF 613


>gi|345194180|tpg|DAA34955.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414585327|tpg|DAA35898.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 795

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 8/99 (8%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D +D   Q+      +Y R+T  Q++ +E  + ECP P   +R++L RE  ++   
Sbjct: 94  GVSVDDQDDPNQRP-SKKKRYHRHTLHQIQEMEAFFKECPHPDDKQRKELSRELGLV--- 149

Query: 67  EPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMN 102
            P Q+K WFQN+R + K   +R+E S+L+A N KL A N
Sbjct: 150 -PLQVKFWFQNKRTQMKNQHERQENSQLRAENEKLRAEN 187



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 172/423 (40%), Gaps = 89/423 (21%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----I 265
           +G    A+R   +V +    + EIL D   +     S+      + VL TG +G     +
Sbjct: 360 YGFKSEASRDSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNGAL 419

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +++ ++   P+ L P RD + +RY     DG+  V + SL+ +            ++   
Sbjct: 420 QVMSVEFQVPSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDTSS----------VLKCRR 469

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQI 384
            PSG LI+    G S +  V+H++++  SV  + + L +S      +  +  L R   ++
Sbjct: 470 RPSGCLIQEMPNGYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERL 529

Query: 385 SQEVSQ--PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           +  ++   P+     +T    R + L+ L++R+   F   +       W+ L   G DDV
Sbjct: 530 ASVMASNIPTSDIGVITSTEGRKSMLK-LAERMVTSFCGGVTASAAHQWTTLSGSGADDV 588

Query: 438 TVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RS 492
            V    S   P +  G+              VL A  S  L  + P  +  FLR+   RS
Sbjct: 589 RVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-ITPKRVFDFLRDESSRS 633

Query: 493 EWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYR 552
           EW     D  S   V                 Q +  +A+  +H   + ++++    +  
Sbjct: 634 EW-----DILSNGGVV----------------QEMAHIANGRDHGNCVSLLRVNQSTNST 672

Query: 553 EDMIMPSDIFLLQ-LCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFR 602
           +     S++ +LQ  C+    +A G  + +++AP+D             D   ++PSGF 
Sbjct: 673 Q-----SNMLILQESCT----DASG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFA 721

Query: 603 IIP 605
           I+P
Sbjct: 722 ILP 724


>gi|164708731|gb|ABY67263.1| homeodomain protein HOX2 [Gossypium arboreum]
          Length = 737

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 8/102 (7%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           +   +Y R+T  Q++ LE ++ ECP P   +R +L +E      ++P+Q+K WFQNRR +
Sbjct: 86  LKKKRYHRHTAHQIQELEAVFKECPHPDDKQRMKLSQEL----GLKPRQVKFWFQNRRTQ 141

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
            K +++ S     N  L A N  L  E  RLQ ++S+LV  N
Sbjct: 142 MKAQQDRSE----NVILRAENDSLKSEFYRLQAELSKLVCPN 179



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 12/206 (5%)

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYT---SVLEDGSL 298
           PS     + V+V++   +G++G ++L+Y +L+  + L P R+ + LRY    +V ++   
Sbjct: 361 PSLVARAKCVQVLSQGVSGTNGCLQLMYAELHVLSPLVPTREAYFLRYCQQQNVEDETYW 420

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
            + +  L+   N       P + R    PSG LI+    G S +  V+H ++E   + ++
Sbjct: 421 AIVDFPLDGFHNSLQT-SFPLYKRR---PSGCLIQDMPNGYSRVTWVEHSEIEEKPIHQI 476

Query: 359 LRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPA-----ALRALSQRLSRG 413
                 S         +A L    +    +   ++   G  P+      +  LSQR+ R 
Sbjct: 477 FSHFVHSGMAFGANCWLAVLERQCERIASLMATNIPDIGVIPSPDARKNIMRLSQRMIRT 536

Query: 414 FNEALNGFTDEGWSMLESDGIDDVTV 439
           F   ++  + + W+ +     D V +
Sbjct: 537 FCVNISSCSGQVWTAVPDSSDDTVII 562


>gi|31339105|dbj|BAC77159.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 131

 Score = 66.2 bits (160), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 8/86 (9%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 84
           +Y R TP+Q++ LE ++ ECP P   +R +L R      N+E +Q+K WFQNRR + KQ 
Sbjct: 4   RYHRXTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKQT 59

Query: 85  ---RKEASRLQAVNRKLTAMNKLLME 107
              R E + L+  N KL A N  + E
Sbjct: 60  QIERHENALLRQENDKLRAENMTIRE 85


>gi|212275139|ref|NP_001130421.1| uncharacterized protein LOC100191517 [Zea mays]
 gi|194689074|gb|ACF78621.1| unknown [Zea mays]
 gi|194700286|gb|ACF84227.1| unknown [Zea mays]
 gi|238011534|gb|ACR36802.1| unknown [Zea mays]
          Length = 290

 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 7/116 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 34  KKRRLTPEQVLLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 89

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT 138
              ++  RL+A    L A +  L+++N+RL+ QV  L  +       T+  AT  T
Sbjct: 90  QLERDFDRLKASFDALRADHDALLQDNNRLRSQVVSLTEKLQEKEDATEGGATADT 145


>gi|226496749|ref|NP_001148520.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|195619978|gb|ACG31819.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|413922242|gb|AFW62174.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 272

 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 13/160 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 132

Query: 86  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT--TD 140
           +   +  RL+A    L A ++ L+ +ND L+ QV  L        ++T  +AT A    D
Sbjct: 133 QLETDYDRLKAAYDALAADHQGLLADNDNLRAQVISLT--EKLQGKETYPSATTAAQEVD 190

Query: 141 TSCESVVTSGQHHLTPQQ--QHQHPPRDASPAGLLSIAEE 178
              E    SG   L  QQ   + H   D +  G LS  E+
Sbjct: 191 QPDEHTAVSGTEELLAQQLKDNLHSSGDCTGHGTLSSEED 230


>gi|115460702|ref|NP_001053951.1| Os04g0627000 [Oryza sativa Japonica Group]
 gi|122240821|sp|Q0J9X2.1|ROC2_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC2; AltName:
           Full=GLABRA 2-like homeobox protein 2; AltName:
           Full=HD-ZIP protein ROC2; AltName: Full=Homeodomain
           transcription factor ROC2; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 2
 gi|113565522|dbj|BAF15865.1| Os04g0627000 [Oryza sativa Japonica Group]
          Length = 784

 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E S+L++ N KL A N
Sbjct: 163 HERHENSQLRSDNEKLRAEN 182



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 118/560 (21%), Positives = 220/560 (39%), Gaps = 134/560 (23%)

Query: 163 PPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
           PP DA+ A + +++EE       +  G                        +G    A+R
Sbjct: 319 PPLDATAAAMETLSEEEYARMFPRGLGPK---------------------QYGLRSEASR 357

Query: 223 ACGLVGLDPTRVAEILKDRPSW---YRDCRSVEV-VNVLPTGSSGT----IELLYMQLYA 274
              +V +    + EIL D   +   + +  S  + + VL TG +G     ++++ ++   
Sbjct: 358 DSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVEFQV 417

Query: 275 PTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRP 334
           P+ L P R+ + +RY     DG+  V + SL++ +  P        ++    PSG LI+ 
Sbjct: 418 PSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP-------VLKCRRRPSGCLIQE 470

Query: 335 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQ--P 391
              G S +  V+H++++  SV  + + L  S      +  +  L R   +++  ++   P
Sbjct: 471 MPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIP 530

Query: 392 S-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS-- 444
           +     +T    R + L+ L++R+   F   +       W+ L   G +DV V    S  
Sbjct: 531 TSDIGVITSSEGRKSMLK-LAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 589

Query: 445 -PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDA 501
            P +  G+              VL A  S  L  VPP  +  FLR+   RSEW     D 
Sbjct: 590 DPGRPPGI--------------VLNAATSFWLP-VPPKRVFDFLRDESSRSEW-----DI 629

Query: 502 YSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTI---EHEEFLEVIKLENMAHYREDMIMP 558
            S                    G ++  +AH     +    + ++++ +    + +M++ 
Sbjct: 630 LS-------------------NGGIVQEMAHIANGRDQGNCVSLLRVNSSNSNQSNMLI- 669

Query: 559 SDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIPLDSG 609
               L + C+    +A G+   +++AP+D             D   ++PSGF I+P    
Sbjct: 670 ----LQESCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP---- 715

Query: 610 KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMA 669
                             GP  +   GD     GS  S++T+AFQ   +      ++  +
Sbjct: 716 -----------------DGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGS 758

Query: 670 RQYVRGIIA-SVQRVALALS 688
              V  +IA +V+R+  A+S
Sbjct: 759 VATVNSLIACTVERIKAAVS 778


>gi|3925363|gb|AAC79430.1| homeodomain protein [Malus x domestica]
          Length = 653

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 170/429 (39%), Gaps = 80/429 (18%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----I 265
           +G    A+R  G V ++   + E L D   W      V       +V+ +G  GT    +
Sbjct: 204 NGFVSEASRESGTVIINSLTLVETLMDSNRWLEMFPGVLARTSTTDVISSGMGGTRNGAL 263

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +L++ +L   + L P R+   LR+     +G   V + S++  ++   +P    F+    
Sbjct: 264 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDAIRDTTGVPT---FMNCRT 320

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYES----------STLIAQKTTM 375
           LPSG +++    G S +  V+H + +   V  + RPL  S          STL  Q    
Sbjct: 321 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHHLYRPLLSSGMGFGAQRWVSTLQRQSECQ 380

Query: 376 AALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID 435
           A L      S++    ++T  GRR  ++  L+QR++  F   +   T   W+ L +  +D
Sbjct: 381 AILMSSCVTSRD--HTAITASGRR--SMLKLAQRMTDNFCAGVCASTVHKWTKLNAGNVD 436

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSE 493
           +          ++M  +  Y  G P     VL A  S+ L    P  L  FLR+   RSE
Sbjct: 437 E--------DVRVMTRESLYHPGEP--PGVVLSAATSVWLP-FSPQRLFDFLRDERLRSE 485

Query: 494 WADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRE 553
           W     D  S      GP               +  +AH  + ++    + L      R 
Sbjct: 486 W-----DILS----NGGP---------------MQEMAHIAKGQDPGNCVSL---LRARA 518

Query: 554 DMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRII 604
           +    S + L + C     +A G+   +V+AP+D            S    ++PSGF I+
Sbjct: 519 NANQGSMLILQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIV 572

Query: 605 PLDSGKDTP 613
           P   G   P
Sbjct: 573 PDGPGSRGP 581


>gi|218195634|gb|EEC78061.1| hypothetical protein OsI_17520 [Oryza sativa Indica Group]
          Length = 784

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E S+L++ N KL A N
Sbjct: 163 HERHENSQLRSDNEKLRAEN 182



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 112/515 (21%), Positives = 208/515 (40%), Gaps = 113/515 (21%)

Query: 208 GIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSW---YRDCRSVEV-VNVLPTGSSG 263
           G+    +G    A+R   +V +    + EIL D   +   + +  S  V + VL TG +G
Sbjct: 343 GLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAVTLEVLSTGVAG 402

Query: 264 T----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
                ++++ ++   P+ L P R+ + +RY     DG+  V + SL++ +  P       
Sbjct: 403 NYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP------- 455

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL- 378
            ++    PSG LI+    G S +  V+H++++  SV  + + L  S      +  +  L 
Sbjct: 456 VLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLD 515

Query: 379 RHLRQISQEVSQ--PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLES 431
           R   +++  ++   P+     +T    R + L+ L++R+   F   +       W+ L  
Sbjct: 516 RQCERLASVMASNIPTSDIGVITSSEGRKSMLK-LAERMVVSFCGGVTASVAHQWTTLSG 574

Query: 432 DGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
            G +DV V    S   P +  G+              VL A  S  L  VPP  +  FLR
Sbjct: 575 SGAEDVRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VPPKRVFDFLR 619

Query: 489 EH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTI---EHEEFLEVI 543
           +   RSEW     D  S                    G ++  +AH     +    + ++
Sbjct: 620 DESSRSEW-----DILS-------------------NGGIVQEMAHIANGRDQGNCVSLL 655

Query: 544 KLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDA 594
           ++ +    + +M++     L + C+    +A G  + +++AP+D             D  
Sbjct: 656 RVNSSNSNQSNMLI-----LQESCT----DASG--SYVIYAPVDVVAMNVVLNGGDPDYV 704

Query: 595 PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQ 654
            ++PSGF I+P                      GP  +   GD     GS  S++T+AFQ
Sbjct: 705 ALLPSGFAILP---------------------DGPAHDGGDGDGGVGVGSGGSLLTVAFQ 743

Query: 655 FAFEMHLQENVASMARQYVRGIIA-SVQRVALALS 688
              +      ++  +   V  +IA +V+R+  A+S
Sbjct: 744 ILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVS 778


>gi|31339097|dbj|BAC77155.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 783

 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 106 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 161

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E S+L++ N KL A N
Sbjct: 162 HERHENSQLRSDNEKLRAEN 181



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 77/353 (21%), Positives = 142/353 (40%), Gaps = 65/353 (18%)

Query: 163 PPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
           PP DA+ A + +++EE       +  G                        +G    A+R
Sbjct: 318 PPLDATAAAMETLSEEEYARMFPRGLGPK---------------------QYGLRSEASR 356

Query: 223 ACGLVGLDPTRVAEILKDRPSW---YRDCRSVEV-VNVLPTGSSGT----IELLYMQLYA 274
              +V +    + EIL D   +   + +  S  + + VL TG +G     ++++ ++   
Sbjct: 357 DSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVEFQV 416

Query: 275 PTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRP 334
           P+ L P R+ + +RY     DG+  V + SL++ +  P        ++    PSG LI+ 
Sbjct: 417 PSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP-------VLKCRRRPSGCLIQE 469

Query: 335 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQ--P 391
              G S +  V+H++++  SV  + + L  S      +  +  L R   +++  ++   P
Sbjct: 470 MPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIP 529

Query: 392 S-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS-- 444
           +     +T    R + L+ L++R+   F   +       W+ L   G +DV V    S  
Sbjct: 530 TSDIGVITSSEGRKSMLK-LAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 588

Query: 445 -PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
            P +  G+ L+ V  F                  VP   +  FLR+   RSEW
Sbjct: 589 DPGRPPGIVLNAVTSF---------------WLPVPSKRVFHFLRDESSRSEW 626


>gi|255555881|ref|XP_002518976.1| homeobox protein, putative [Ricinus communis]
 gi|223541963|gb|EEF43509.1| homeobox protein, putative [Ricinus communis]
          Length = 810

 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 8/95 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E L+ ECP P   +R +L ++      ++P+Q+K WFQNRR + K +
Sbjct: 89  RYHRHTARQIQEMESLFKECPHPDDKQRMKLSQDL----GLKPRQVKFWFQNRRTQMKAQ 144

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           ++    +A N  L A N+ L  +N RLQ ++  L+
Sbjct: 145 QD----RADNIILRAENETLKSDNYRLQAELRNLI 175



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 17/237 (7%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLR 288
           LD  +  E+    PS     R+V+++    +G SG++ L++ +L   + L P R+ + LR
Sbjct: 362 LDANKWMELF---PSIVAMARTVQILTSGVSGPSGSLHLMHAELQVLSPLVPTREAYFLR 418

Query: 289 YTSV-LEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDH 347
           Y    +E+G+  + +  +++          P + R    PSG +I+    G S +  V+H
Sbjct: 419 YCQQNVEEGTWAIVDFPIDSFHED-IQASFPLYRRR---PSGCVIQDMPNGYSRVTWVEH 474

Query: 348 MDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPA-----A 402
            + E   V ++      S         +  L+   +    +   +++  G  P+      
Sbjct: 475 AETEEKPVHQIFSHFVYSGMAFGAHRWLGVLQRQCERVASLMARNISDLGVIPSPEARKN 534

Query: 403 LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD---VTVHVNSSPSKMMGVQLSYV 456
           L  L+QR+ R F   ++  + + W+ L SD  DD   +T    + P +  GV LS V
Sbjct: 535 LMRLAQRMIRTFCMNISTCSGQSWTAL-SDSSDDTVRITTRKITEPGQPNGVILSAV 590


>gi|225427116|ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein ROC3 [Vitis vinifera]
 gi|147777871|emb|CAN60291.1| hypothetical protein VITISV_032685 [Vitis vinifera]
 gi|297742043|emb|CBI33830.3| unnamed protein product [Vitis vinifera]
          Length = 798

 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 8/98 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 89  RYHRHTARQIQEMEALFKECPHPDDKQRMKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 144

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           ++ S     N  L A N+ L  EN RLQ  +  ++  N
Sbjct: 145 QDRSD----NVILRAENENLKNENYRLQAALRSVICPN 178



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 17/237 (7%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLR 288
           LD  +  E+    PS     ++V+V++ +   ++G++ L+Y +L   + L P R+   LR
Sbjct: 360 LDAMKWMELF---PSIISRAKTVQVLSGVSGHANGSLHLMYAELQVLSPLVPTRETHFLR 416

Query: 289 YTSV-LEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDH 347
           Y    +++G+  + +  + ++ N    P  P + R    PSG +I+    G S +  V+H
Sbjct: 417 YCQQNVDEGTWAIVDFPI-DSFNDNLQPSVPRYRRR---PSGCIIQDMPNGYSRVTWVEH 472

Query: 348 MDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPA-----A 402
            D+E   V  +      S         +A L+   +    +   +++  G  P+      
Sbjct: 473 ADVEEKPVHHIFHHFVNSGMAFGATRWLAVLQRQCERVASLMARNISDLGVIPSPEARKN 532

Query: 403 LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD---VTVHVNSSPSKMMGVQLSYV 456
           L  L+QR+ R F+  ++  + + W+ L SD  DD   +T    + P +  GV LS V
Sbjct: 533 LMNLAQRMIRTFSVNISTSSGQSWTAL-SDSSDDTVRITTRKITEPGQPNGVILSAV 588


>gi|356529736|ref|XP_003533444.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Glycine max]
          Length = 807

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 13/118 (11%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           SG  ++S +   +K      +Y R+T  Q++ +E L+ ECP P   +R +L  E      
Sbjct: 80  SGNEQESHEQPTKK-----KRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHEL----G 130

Query: 66  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           ++P+Q+K WFQNRR + K +++    +A N  L A N+ L  EN RLQ  +  ++  N
Sbjct: 131 LKPRQVKFWFQNRRTQMKAQQD----RADNVILRAENESLKSENYRLQAALRNVICPN 184



 Score = 42.7 bits (99), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 113/255 (44%), Gaps = 24/255 (9%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTG-SSGTIELLYMQ 271
           A+R   +V ++   + +   D   W           ++V++++   +G +SGT++L+Y +
Sbjct: 348 ASRDTSVVIMNSVTLVDAFLDAQKWMELFPTIVSRAKTVQIISSGASGLASGTLQLMYAE 407

Query: 272 LYAPTTLAPARDFWLLRYTSV-LEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGY 330
               + L   R+   LRY     E+G+  + +  +++       P  P + R     SG 
Sbjct: 408 FQVLSPLVSTRETHFLRYCQQNAEEGTWAIVDFPVDSFHQN-FHPSYPRYCRRS---SGC 463

Query: 331 LIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTLIAQKTTMAALRHLRQISQEVS 389
           +I+    G S +  V+H  +E   V ++    +Y      AQ+      R   +++  ++
Sbjct: 464 VIQDMPNGYSRVTWVEHAKVEEKPVHQIFCNYVYSGMAFGAQRWLGVLQRQCERVASLMA 523

Query: 390 QPSVTGWGRRPA-----ALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD---VTVHV 441
           + +++  G  P+      L  L+QR+ + F+  ++    + W+ + SD  +D   +T   
Sbjct: 524 R-NISDLGAIPSPEARKNLMKLAQRMIKTFSLNMSTSGGQSWTAI-SDSPEDTVRITTRK 581

Query: 442 NSSPSKMMGVQLSYV 456
            + P +  GV LS V
Sbjct: 582 ITEPGQPNGVILSAV 596


>gi|357137911|ref|XP_003570542.1| PREDICTED: homeobox-leucine zipper protein ROC8-like [Brachypodium
           distachyon]
          Length = 713

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 22/107 (20%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+TP Q++ LE  + ECP P   +R  L RE      +EP+QIK WFQNRR + K +
Sbjct: 24  RYHRHTPRQIQQLEATFKECPHPDENQRMHLSREL----GLEPRQIKFWFQNRRTQMKAQ 79

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
            E            A N  L  END+++        EN   R+  +N
Sbjct: 80  HE-----------RADNCFLRAENDKIR-------CENIAMREALKN 108



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 115/285 (40%), Gaps = 34/285 (11%)

Query: 198 PGMKPGPDSIGIVAISHGC-TGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV 256
           PG   GPD + +      C   + A A   + +D ++ A+     P+     R+V+V+  
Sbjct: 263 PGGSRGPD-VHVEGSRDSCLVLLPAHALVDIFMDSSKWADFF---PTIVAKARTVDVLVS 318

Query: 257 LPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQN-----G 311
              G S ++ L+  +L+  T + P R+   LRY   +E G   V + S++  Q       
Sbjct: 319 GMAGRSESLVLMQEELHVMTPVVPTRELCFLRYCRQIEQGLWAVADVSVDLLQQRDHAAA 378

Query: 312 PSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYE----SST 367
                AP   RA  LPSG LI     G S +  V+HM+         + PLY     S  
Sbjct: 379 SRYYGAPPQARARKLPSGCLIADMSNGYSKVTWVEHMETTEGDNKNPINPLYRDLVLSGA 438

Query: 368 LIAQKTTMAAL-----RHLRQISQEVSQ----PSVTGWGRRPAALRALSQRLSRGFNEAL 418
                  +AAL     RH   ++  +        VT  G+R  ++  LS+R+   F  +L
Sbjct: 439 AFGAHRWLAALQRACDRHACLVAASMPHRDIAAGVTAEGKR--SMMRLSERMVSSFCGSL 496

Query: 419 NGFTDEGWSMLESDGIDD---------VTVHVNSSPSKMMGVQLS 454
           +      W+ L   G            V VH ++ P +  GV LS
Sbjct: 497 SASQAHRWTTLSGPGSSGGGGDDVGVRVMVHRSTDPGQPNGVVLS 541


>gi|39545845|emb|CAE04753.3| OSJNBb0060E08.16 [Oryza sativa Japonica Group]
          Length = 781

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 104 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 159

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E S+L++ N KL A N
Sbjct: 160 HERHENSQLRSDNEKLRAEN 179



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 118/560 (21%), Positives = 220/560 (39%), Gaps = 134/560 (23%)

Query: 163 PPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
           PP DA+ A + +++EE       +  G                        +G    A+R
Sbjct: 316 PPLDATAAAMETLSEEEYARMFPRGLGPK---------------------QYGLRSEASR 354

Query: 223 ACGLVGLDPTRVAEILKDRPSW---YRDCRSVEV-VNVLPTGSSGT----IELLYMQLYA 274
              +V +    + EIL D   +   + +  S  + + VL TG +G     ++++ ++   
Sbjct: 355 DSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVEFQV 414

Query: 275 PTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRP 334
           P+ L P R+ + +RY     DG+  V + SL++ +  P        ++    PSG LI+ 
Sbjct: 415 PSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP-------VLKCRRRPSGCLIQE 467

Query: 335 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQ--P 391
              G S +  V+H++++  SV  + + L  S      +  +  L R   +++  ++   P
Sbjct: 468 MPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIP 527

Query: 392 S-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS-- 444
           +     +T    R + L+ L++R+   F   +       W+ L   G +DV V    S  
Sbjct: 528 TSDIGVITSSEGRKSMLK-LAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 586

Query: 445 -PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDA 501
            P +  G+              VL A  S  L  VPP  +  FLR+   RSEW     D 
Sbjct: 587 DPGRPPGI--------------VLNAATSFWLP-VPPKRVFDFLRDESSRSEW-----DI 626

Query: 502 YSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTI---EHEEFLEVIKLENMAHYREDMIMP 558
            S                    G ++  +AH     +    + ++++ +    + +M++ 
Sbjct: 627 LS-------------------NGGIVQEMAHIANGRDQGNCVSLLRVNSSNSNQSNMLI- 666

Query: 559 SDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIPLDSG 609
               L + C+    +A G+   +++AP+D             D   ++PSGF I+P    
Sbjct: 667 ----LQESCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP---- 712

Query: 610 KDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMA 669
                             GP  +   GD     GS  S++T+AFQ   +      ++  +
Sbjct: 713 -----------------DGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGS 755

Query: 670 RQYVRGIIA-SVQRVALALS 688
              V  +IA +V+R+  A+S
Sbjct: 756 VATVNSLIACTVERIKAAVS 775


>gi|414884340|tpg|DAA60354.1| TPA: hypothetical protein ZEAMMB73_058304 [Zea mays]
          Length = 623

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 101/449 (22%), Positives = 189/449 (42%), Gaps = 95/449 (21%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNV-------LPTGSSGT-IELLY-- 269
           A+RA G+V    T +   L D   W     SV V +V       +  G  G+ I+L+   
Sbjct: 151 ASRATGVVRASATYLVATLTDARRWSEMFPSV-VASVTARRDAAISGGVFGSHIQLMNAE 209

Query: 270 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN-----------------TQNGP 312
           +Q+++P  L  + +F  LRYT  + +G   V + S++                    NG 
Sbjct: 210 LQVHSPRLLNRSINF--LRYTKRVAEGRWAVMDVSVDGILGPPGSRVADAAAAAAAANGV 267

Query: 313 SMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQK 372
           ++  A  +    +LPSG L+     G   +  V H + +  +VP + RPL+ S   +   
Sbjct: 268 TLVPA-WYTGCRLLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRSGKALGAH 326

Query: 373 TTMAALR---------HLRQISQ--EVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
             +A+L+         H  Q+S+  + +  +++  G+R   +  L+QR+   F  A++G 
Sbjct: 327 RWLASLQRQCEFLAVLHSSQVSRGGDNTAAAISSMGKR--GVLELAQRMVADFYSAVSGP 384

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPSKM-MGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
             +      S  ID+      +   +    V++       ++++ VL A  ++ L + PP
Sbjct: 385 VTQ-----PSSSIDEWYGSAGAGARRTDTAVRMVTSKKAGTVADLVLSASTTVWLPNTPP 439

Query: 481 AILLRFLRE--HRSEWADSSIDAY--SAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEH 536
            ++ R+LR+   R EW     DA+  S+AAV    CS+P    G+  G  +  L   +  
Sbjct: 440 QLVFRYLRDDQRRGEW-----DAFFASSAAVTE-LCSVPT---GHLNGNAVSVLYSNVT- 489

Query: 537 EEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------AS 589
                           +       + L + C+        +C+ +V+AP++        +
Sbjct: 490 ----------------DGTDRKKTLILQEACTD------ASCSMVVYAPVEEDSMRAVMN 527

Query: 590 FSDDAPI--IPSGFRIIPLDSGKDTPSPN 616
             D A +  +PSGF ++P   G+   +P+
Sbjct: 528 GGDHASVFLLPSGFAVLPDGHGRARHAPS 556


>gi|302773265|ref|XP_002970050.1| hypothetical protein SELMODRAFT_450564 [Selaginella moellendorffii]
 gi|300162561|gb|EFJ29174.1| hypothetical protein SELMODRAFT_450564 [Selaginella moellendorffii]
          Length = 683

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 139/344 (40%), Gaps = 44/344 (12%)

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDP 231
           LL +A ET     S   GT     Q    +  P  +G   +  G    A+R  GLV ++ 
Sbjct: 208 LLLVAAETDGALWSSVDGTKEVLSQEEYFRQFPRGLGPRLM--GMETEASRETGLVMMNA 265

Query: 232 TRVAEILKDRPSWYRDCRSVE----VVNVLPTGSSGT----IELLYMQLYAPTTLAPARD 283
             + + + +   W     ++        VL TG  G     ++LLY +L   + L P R+
Sbjct: 266 AGLIDTIMNVGRWVDMFSNIVSRAFTTQVLTTGVGGNWNNALQLLYAELQILSPLVPTRE 325

Query: 284 FWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIH 343
           F+ LRY     +    + + S++  ++ P+ PQ    +R  M PSG+ I   + G S + 
Sbjct: 326 FFFLRYCKQHSERVWAIVDVSIDGLRDNPA-PQ----LRCRMRPSGFFIEDLQNGYSKVT 380

Query: 344 IVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-------ISQEVSQPSV--- 393
            V H++ +      +   L  S      K  +A L+  RQ       ++  +S   +   
Sbjct: 381 AVQHIEADHRQTENIYHGLVCSGAAFGAKRWLAILQ--RQCERLGIMLTNNISARDLGVI 438

Query: 394 -TGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQ 452
               GRR  ++  L+QR++  +   ++      W+ L   G +D+ V    S        
Sbjct: 439 PNANGRR--SMLFLAQRMTSNYCAGVSASIVHTWTTLSGAGEEDIRVMTRKS-------- 488

Query: 453 LSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
              VN  P     ++ + A+ L   V    L  FLR+   RSEW
Sbjct: 489 ---VNN-PGEPPGIVLSAATSLWVPVNSQRLFEFLRDERLRSEW 528



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 28/133 (21%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T +Q   LE ++ ECP P   +RQ+L RE      +EP+Q+K WFQNRR + K  
Sbjct: 21  RYHRHTVQQTRQLE-MFKECPHPDEKQRQELGREL----GLEPRQVKFWFQNRRTQMKAH 75

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
            E            A N +L  EN+ L+        EN   R+  ++A+        C  
Sbjct: 76  HE-----------RADNSILRAENENLRT-------ENIALREALKDASC-----PKCGG 112

Query: 146 VVTSGQHHLTPQQ 158
            +T G+   T QQ
Sbjct: 113 QLTPGEMSFTEQQ 125


>gi|116312004|emb|CAJ86361.1| OSIGBa0117N13.5 [Oryza sativa Indica Group]
          Length = 781

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 104 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 159

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E S+L++ N KL A N
Sbjct: 160 HERHENSQLRSDNEKLRAEN 179



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 112/515 (21%), Positives = 208/515 (40%), Gaps = 113/515 (21%)

Query: 208 GIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSW---YRDCRSVEV-VNVLPTGSSG 263
           G+    +G    A+R   +V +    + EIL D   +   + +  S  V + VL TG +G
Sbjct: 340 GLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAVTLEVLSTGVAG 399

Query: 264 T----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
                ++++ ++   P+ L P R+ + +RY     DG+  V + SL++ +  P       
Sbjct: 400 NYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP------- 452

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL- 378
            ++    PSG LI+    G S +  V+H++++  SV  + + L  S      +  +  L 
Sbjct: 453 VLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLD 512

Query: 379 RHLRQISQEVSQ--PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLES 431
           R   +++  ++   P+     +T    R + L+ L++R+   F   +       W+ L  
Sbjct: 513 RQCERLASVMASNIPTSDIGVITSSEGRKSMLK-LAERMVVSFCGGVTASVAHQWTTLSG 571

Query: 432 DGIDDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
            G +DV V    S   P +  G+              VL A  S  L  VPP  +  FLR
Sbjct: 572 SGAEDVRVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VPPKRVFDFLR 616

Query: 489 EH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTI---EHEEFLEVI 543
           +   RSEW     D  S                    G ++  +AH     +    + ++
Sbjct: 617 DESSRSEW-----DILS-------------------NGGIVQEMAHIANGRDQGNCVSLL 652

Query: 544 KLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDA 594
           ++ +    + +M++     L + C+    +A G+   +++AP+D             D  
Sbjct: 653 RVNSSNSNQSNMLI-----LQESCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYV 701

Query: 595 PIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQ 654
            ++PSGF I+P                      GP  +   GD     GS  S++T+AFQ
Sbjct: 702 ALLPSGFAILP---------------------DGPAHDGGDGDGGVGVGSGGSLLTVAFQ 740

Query: 655 FAFEMHLQENVASMARQYVRGIIA-SVQRVALALS 688
              +      ++  +   V  +IA +V+R+  A+S
Sbjct: 741 ILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVS 775


>gi|15209142|gb|AAK91875.1|AC091665_1 Putative homeodomain-leucine zipper protein [Oryza sativa]
          Length = 217

 Score = 65.9 bits (159), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/34 (79%), Positives = 31/34 (91%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQ 55
           MD+GKYV+YTP+QVEALER+Y ECPKPS  RRQQ
Sbjct: 155 MDSGKYVQYTPDQVEALERVYAECPKPSFCRRQQ 188


>gi|255539515|ref|XP_002510822.1| homeobox protein, putative [Ricinus communis]
 gi|223549937|gb|EEF51424.1| homeobox protein, putative [Ricinus communis]
          Length = 799

 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 8/102 (7%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S D +++G  +      KY R+TP Q++ LE  + ECP P   +R +L R       +
Sbjct: 85  GASGDDQEAGEDQRPRKK-KYHRHTPLQIQELEVCFKECPHPDEKQRLELSRRL----GL 139

Query: 67  EPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLL 105
           E KQIK WFQNRR + K   +R E   L+  N KL A N+LL
Sbjct: 140 ESKQIKFWFQNRRTQMKTQLERHENIILRQENDKLRAENELL 181



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 121/293 (41%), Gaps = 34/293 (11%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----IELLYMQ 271
           A R  G+V ++   + EIL D   W     S+      ++V+ +G +GT    ++++  +
Sbjct: 360 ATRDTGIVIINILALVEILMDVNRWLEAFPSLIARASTIDVISSGMAGTKNGALQVMNAE 419

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN-NTQNGPSMPQAPHFVRAEMLPSGY 330
               + L P R    LR+     +G  VV + S++ N ++  + P    F     LPSG 
Sbjct: 420 FQVVSPLVPVRQVRFLRFCKQHSEGVWVVVDVSIDANLESSNAHP----FAACRRLPSGC 475

Query: 331 LIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQ 390
           +++    G S +  V+H + +  +V ++ R +  S      +  +A L+   +    +  
Sbjct: 476 ILQEMPNGCSKVTWVEHSEYDESAVHQLYRSILSSGKGFGAQRWVATLQRYCECMTILMS 535

Query: 391 PSVTGWGRRPAALRA------LSQRLSRGFNEALNGFTDEGWSMLESDGI-DDVTVHVNS 443
           P+++G  +   +L        L+QR+   F   +   +   W  L    I +DV +    
Sbjct: 536 PTISGEDQTVMSLSGKKSMLKLAQRMVDNFCSGVCASSLRKWDKLLVGNIGEDVRILTRK 595

Query: 444 SPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRS--EW 494
           +           +N        VL A  S+ L  V    L  FLR+ RS  EW
Sbjct: 596 N-----------INDPGEPPGIVLSAATSVWLP-VMRQRLFDFLRDERSRCEW 636


>gi|224071383|ref|XP_002303433.1| predicted protein [Populus trichocarpa]
 gi|222840865|gb|EEE78412.1| predicted protein [Populus trichocarpa]
          Length = 774

 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 13/118 (11%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           SG  ++S +   +K      +Y R+T  Q++ +E ++ ECP P   +R +L +E      
Sbjct: 74  SGNEQESSEQPPKK-----KRYHRHTAAQIQEMEAMFKECPHPDDKQRMRLSQEL----G 124

Query: 66  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           ++P+Q+K WFQNRR + K +++ S     N  L A N+ L  +N RLQ ++  L+  N
Sbjct: 125 LKPRQVKFWFQNRRTQMKAQQDRSD----NLILRAENESLKNDNYRLQAELRNLICPN 178



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 118/254 (46%), Gaps = 23/254 (9%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTGSSGTIELLYMQL 272
           A R C +V ++   + +   D   W           ++V+V+    +G+SG++ L+Y +L
Sbjct: 342 ATRDCAVVIMNSITLVDAFLDANKWMELFPSIVARAKTVQVITPGISGASGSLHLMYAEL 401

Query: 273 YAPTTLAPARDFWLLRYT-SVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
              + L P R+ + LR+    +E+G+  + +  L+   +    P  P + R    PSG +
Sbjct: 402 QVLSPLVPTRETYFLRFCHQNVEEGTWAIVDFPLDRLHDN-IQPSFPLYKRH---PSGCV 457

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTLIAQKTTMAALRHLRQISQEVSQ 390
           I+    G S +  ++H ++E   V ++  + +Y      A +      R   +++  +++
Sbjct: 458 IQDMPNGYSRVTWIEHAEIEEKPVHQIFSQYVYSGMAFGAHRWLTVLQRQCERVASLMAR 517

Query: 391 PSVTGWGRRPA-----ALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD---VTVHVN 442
            +++  G  P+      +  L+QR+ R F+  ++  + + W+ L SD  DD   +T    
Sbjct: 518 -NISDLGVIPSPEARKNMMRLAQRMIRIFSLNISSSSGQSWTGL-SDSYDDTVRITTRKI 575

Query: 443 SSPSKMMGVQLSYV 456
           + P +  GV LS V
Sbjct: 576 TEPGQPNGVILSAV 589


>gi|357448571|ref|XP_003594561.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483609|gb|AES64812.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 694

 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 123/589 (20%), Positives = 215/589 (36%), Gaps = 114/589 (19%)

Query: 7   GGSRDSRDSGGQKMIMDNGK---YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPIL 63
           GGS    +  G     D+GK   + R T  Q   L+    EC  P   +R QL     + 
Sbjct: 7   GGSESGEEVNGN--FRDDGKKPSHKRLTSAQTSILKNFMKECHHPDEAQRCQL----AVK 60

Query: 64  SNIEPKQIKVWFQNRRC---REKQRKEASRLQAVNRKLTAMNKLLMEE------------ 108
             +EPKQIK WFQN+R     + +R+    L+  N K+   N  + EE            
Sbjct: 61  IGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENLKIKEELKAKICLDCGGS 120

Query: 109 ----NDRLQKQVSQLVYENTFFRQQTQNAATLATT-----------------------DT 141
                D  Q  V ++  EN   +Q+ +  ++L  +                       D 
Sbjct: 121 PFPMKDH-QNFVQEMKQENAQLKQECEKVSSLLASYMEKKISRPEFEQALKSIKSFPRDY 179

Query: 142 SCES------VVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV 195
            C S      V+  G    T  Q +     DA    +  + +  + E +         WV
Sbjct: 180 ECSSHMQGNLVMWGGVLGQTSTQNY-----DAQKITMSQVVDAAMDELVRLVRVDEPFWV 234

Query: 196 QMPGMKPG-----PDSIGIVAISHGCTGV-----AARACGLVGLDPTRVAEILKDRPSWY 245
           +    + G      +   +   ++   G      +++  GLV +    +  +  D   W 
Sbjct: 235 KPSNTQDGYTLHRENYEQVFPKNNHFKGAYVCEESSKYSGLVKISGIELVGMFLDLVKWT 294

Query: 246 RDCRSV----EVVNVLPTGSSGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGS 297
               ++    E + V   GS G+    + L+  +++  + L   R+F ++RY   ++ G 
Sbjct: 295 NLFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPGV 354

Query: 298 LVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLE-PWSVP 356
            V+ + S ++     S P      R    PSG +IR    GG ++  V+H+++E      
Sbjct: 355 WVITDVSFDS-----SRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTH 409

Query: 357 EVLRPLYESSTLIAQKTTMAALRHL--RQISQEVSQPSV--------TGWGRRPAALRAL 406
            V R L     L   ++ +  L+ +  R +   V    V        T  GR   ++  L
Sbjct: 410 YVYRDLVGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRN--SVIKL 467

Query: 407 SQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAV 466
           + R+ + F E L        + L  D I  V V + ++            +   S  N  
Sbjct: 468 ADRMVKMFCECLTMPGQVELNHLTLDSIGGVRVSIRAT-----------TDDDASQPNGT 516

Query: 467 LCAKASMLLQDVPPAILLRFLRE--HRSEWADSSID--AYSAAAVKAGP 511
           +   A+ L   +P   +  FL++   RS+W   S     +  A +  GP
Sbjct: 517 VVTAATTLWLPLPAQKVFEFLKDPTKRSQWNGLSCGNPMHEIAHISNGP 565


>gi|224118060|ref|XP_002317722.1| predicted protein [Populus trichocarpa]
 gi|222858395|gb|EEE95942.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 30/261 (11%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRD-------CRSVEVVNVLPTGS-SGTIELLYMQ 271
           ++R  G+V ++   + ++  D   W           +++EV++    G+ SG+++L+Y +
Sbjct: 280 SSRDSGVVIMNGVALVDMFMDSNKWVESFPTIVSVAKTIEVISSGMLGNHSGSLQLMYEE 339

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   + L P R+F +LRY   +E G   +   S +       +PQ     +   LPSG L
Sbjct: 340 LQVLSPLVPTREFCILRYCQQIEQGLWAIVSVSYD-------IPQFASQFQCHRLPSGCL 392

Query: 332 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTLIAQKTTMAALRHL--RQISQEV 388
           I+    G S +  V+H+++E  +   ++ R L  S      +  +A L+ +  R   Q V
Sbjct: 393 IQDMPNGYSKVIWVEHVEIEDKAPTHQLYRDLIHSGLAFGAERWLATLQRMCERVACQMV 452

Query: 389 SQPSVTGWGR---RPAALRA---LSQRLSRGFNEALNGFTDEGWSMLESDGIDDV----T 438
           S  S    G     P   R+   L QR+   F  +++      WS L   G+ DV    T
Sbjct: 453 SGSSTRDLGGVIPSPEGKRSMMKLGQRMVSSFCSSISTSNSHRWSTLS--GLHDVGVRIT 510

Query: 439 VHVNSSPSKMMGVQLSYVNGF 459
           +H N+ P +  GV LS    F
Sbjct: 511 LHKNTDPGQPNGVVLSAATTF 531



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ LE ++ E P P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 29  RYHRHTAHQIQKLESMFKEFPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 84

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R + S L+A N K+   N  + E
Sbjct: 85  HERADNSSLRAENDKIRCENIAIRE 109


>gi|224138204|ref|XP_002326544.1| predicted protein [Populus trichocarpa]
 gi|222833866|gb|EEE72343.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 8/95 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E ++ ECP P   +R +L  E      ++P+Q+K WFQNRR + K +
Sbjct: 35  RYHRHTARQIQEMEAMFKECPHPDDKQRMRLSHEL----GLKPRQVKFWFQNRRTQMKAQ 90

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           ++ S     N  L A N+ L  +N RLQ ++  L+
Sbjct: 91  QDRSD----NNILRAENESLQNDNYRLQAELRNLI 121



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/252 (21%), Positives = 109/252 (43%), Gaps = 19/252 (7%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTGSSGTIELLYMQL 272
           A R C +V ++   + +   D   W           ++V+V+     G+SG++ L+Y +L
Sbjct: 262 ATRDCAVVIMNSINLVDAFLDANKWMELFPSIVARAKTVQVIKTGVCGASGSLHLMYAEL 321

Query: 273 YAPTTLAPARDFWLLRYTSV-LEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
              + L P R+   LR+    +E+G+  + +  L++  +    P  P + R    PSG +
Sbjct: 322 QVLSPLVPTRETHFLRFCQQNVEEGTWAIVDFPLDSFHDNIR-PSFPLYRRR---PSGCV 377

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQP 391
           I+    G S +  ++H ++E   V ++      S         +A L+   +    +   
Sbjct: 378 IQDLPNGYSKLTWIEHAEIEDKPVHQIFSQYIYSGMAFGAHRWLAVLQRQCERVASLMAR 437

Query: 392 SVTGWGRRPA-----ALRALSQRLSRGFNEALNGFTDEGWSML--ESDGIDDVTVHVNSS 444
           +++  G  P+      +  L+QR+ R F+  ++  + + W+ L    DG   +     + 
Sbjct: 438 NISDLGVIPSPEARKNMMRLAQRMIRTFSLNISTSSGQSWTALPDSHDGTVRIISREITE 497

Query: 445 PSKMMGVQLSYV 456
           P +  GV LS V
Sbjct: 498 PGQPNGVILSAV 509


>gi|449436842|ref|XP_004136201.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
           sativus]
          Length = 803

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 98  RYHRHTARQIQEMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 153

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           ++ S     N  L A N+ L  EN RLQ  +  ++
Sbjct: 154 QDRSD----NVILRAENETLKNENYRLQSALRNII 184


>gi|125591714|gb|EAZ32064.1| hypothetical protein OsJ_16252 [Oryza sativa Japonica Group]
          Length = 779

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 104 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 159

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E S+L++ N KL A N
Sbjct: 160 HERHENSQLRSDNEKLRAEN 179



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 117/557 (21%), Positives = 220/557 (39%), Gaps = 128/557 (22%)

Query: 163 PPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
           PP DA+ A + +++EE       +  G                        +G    A+R
Sbjct: 314 PPLDATAAAMETLSEEEYARMFPRGLGPK---------------------QYGLRSEASR 352

Query: 223 ACGLVGLDPTRVAEILKDRPSW---YRDCRSVEV-VNVLPTGSSGT----IELLYMQLYA 274
              +V +    + EIL D   +   + +  S  + + VL TG +G     ++++ ++   
Sbjct: 353 DSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVEFQV 412

Query: 275 PTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRP 334
           P+ L P R+ + +RY     DG+  V + SL++ +  P        ++    PSG LI+ 
Sbjct: 413 PSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP-------VLKCRRRPSGCLIQE 465

Query: 335 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQ--P 391
              G S +  V+H++++  SV  + + L  S      +  +  L R   +++  ++   P
Sbjct: 466 MPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIP 525

Query: 392 S-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSS-- 444
           +     +T    R + L+ L++R+   F   +       W+ L   G +DV V    S  
Sbjct: 526 TSDIGVITSSEGRKSMLK-LAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 584

Query: 445 -PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDA 501
            P +  G+              VL A  S  L  VPP  +  FLR+   RSEW     D 
Sbjct: 585 DPGRPPGI--------------VLNAATSFWLP-VPPKRVFDFLRDESSRSEW-----DI 624

Query: 502 YSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDI 561
            S   +                 Q +  +A+  +    + ++++ +    + +M++    
Sbjct: 625 LSNGGIV----------------QEMAHIANGRDQGNCVSLLRVNSSNSNQSNMLI---- 664

Query: 562 FLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIPLDSGKDT 612
            L + C+    +A G  + +++AP+D             D   ++PSGF I+P       
Sbjct: 665 -LQESCT----DASG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP------- 710

Query: 613 PSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQY 672
                          GP  +   GD     GS  S++T+AFQ   +      ++  +   
Sbjct: 711 --------------DGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVAT 756

Query: 673 VRGIIA-SVQRVALALS 688
           V  +IA +V+R+  A+S
Sbjct: 757 VNSLIACTVERIKAAVS 773


>gi|449445947|ref|XP_004140733.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
          Length = 706

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 30/144 (20%)

Query: 12  SRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQI 71
           S D  G+K       Y R+ P Q++ LE  + +CP P   +R+QL RE      +E KQI
Sbjct: 18  SNDRKGKK------TYHRHNPYQIQQLESFFRQCPHPDENQRRQLSREL----GLETKQI 67

Query: 72  KVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME----------------ENDRL 112
           K WFQN+R + K   +R + S L+  N K+   N  + E                E +R 
Sbjct: 68  KFWFQNKRTQTKAQNERADNSSLRTENEKIQCENLAIREALRNVICPSCGGPPFGEEER- 126

Query: 113 QKQVSQLVYENTFFRQQTQNAATL 136
           Q+ + +L  EN+  +++ +  + L
Sbjct: 127 QRNLQKLRLENSHLKEEHEKVSNL 150



 Score = 47.0 bits (110), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 14/140 (10%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSW-------YRDCRSVEVVNV-LPTGSSGTIELLYMQ 271
           +++A G+V +   ++ +   D   W         +  +  +++  +P   SG ++L+Y Q
Sbjct: 276 SSKALGVVTMSAIQLVDFFLDADKWADLFPTIITNAETFHIIDPGMPGNRSGALQLMYQQ 335

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           ++  + L   RDF  LR+   +E G  V+ + S    ++  +        R   LPSG L
Sbjct: 336 MHIFSPLVSPRDFCFLRHCQQIEFGVWVIVDVSYEILKDCVTS------ARCWRLPSGCL 389

Query: 332 IRPCEGGGSIIHIVDHMDLE 351
           I+    G S +  V+H++++
Sbjct: 390 IQEMPNGCSKVTWVEHVEVD 409


>gi|15219456|ref|NP_177479.1| homeobox-leucine zipper protein HDG11 [Arabidopsis thaliana]
 gi|75263138|sp|Q9FX31.1|HDG11_ARATH RecName: Full=Homeobox-leucine zipper protein HDG11; AltName:
           Full=HD-ZIP protein HDG11; AltName: Full=Homeodomain
           GLABRA 2-like protein 11; AltName: Full=Homeodomain
           transcription factor HDG11; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 11
 gi|11120798|gb|AAG30978.1|AC012396_14 homeobox protein, putative [Arabidopsis thaliana]
 gi|28393178|gb|AAO42020.1| putative homeobox protein [Arabidopsis thaliana]
 gi|28827208|gb|AAO50448.1| putative homeobox protein [Arabidopsis thaliana]
 gi|332197328|gb|AEE35449.1| homeobox-leucine zipper protein HDG11 [Arabidopsis thaliana]
          Length = 722

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 25/132 (18%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T +Q++ LE  + ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 35  RYHRHTAQQIQRLESSFKECPHPDEKQRNQLSREL----GLAPRQIKFWFQNRRTQLKAQ 90

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME----------------ENDRLQKQVSQLVYENTFF 126
            +R + S L+A N K+   N  + E                E+    +Q  +L  EN   
Sbjct: 91  HERADNSALKAENDKIRCENIAIREALKHAICPNCGGPPVSEDPYFDEQ--KLRIENAHL 148

Query: 127 RQQTQNAATLAT 138
           R++ +  +T+A+
Sbjct: 149 REELERMSTIAS 160



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 122/289 (42%), Gaps = 32/289 (11%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGTIE----LLYMQ 271
           A+R+ G+V ++   + ++  D   W     S+    + + V+ +G  GT E    LLY +
Sbjct: 291 ASRSSGIVFMNAMALVDMFMDCVKWTELFPSIIAASKTLAVISSGMGGTHEGALHLLYEE 350

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           +   + L   R+F  LRY    E GS +V   S +       +PQ     ++   PSG L
Sbjct: 351 MEVLSPLVATREFCELRYCQQTEQGSWIVVNVSYD-------LPQFVSHSQSYRFPSGCL 403

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR---HLRQISQEV 388
           I+    G S +  V+H++ E     E++  LY    +I +     A R    L+++ +  
Sbjct: 404 IQDMPNGYSKVTWVEHIETEE---KELVHELYRE--IIHRGIAFGADRWVTTLQRMCERF 458

Query: 389 SQPSVTGWGRRPAALRALSQRLSRGFNE-ALNGFTDEGWSMLESDGIDDVTVHVNSSPSK 447
           +  SV     R      LS    R     A    ++   S+  S+      V    S   
Sbjct: 459 ASLSVPASSSRDLGGVILSPEGKRSMMRLAQRMISNYCLSVSRSNNTRSTVV----SELN 514

Query: 448 MMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRS--EW 494
            +G++++  +  P  +  VLCA  +  L + P  +   FL++ R+  +W
Sbjct: 515 EVGIRVT-AHKSPEPNGTVLCAATTFWLPNSPQNV-FNFLKDERTRPQW 561


>gi|75315198|sp|Q9XH36.1|HOX5_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX5; AltName:
           Full=HD-ZIP protein HOX5; AltName: Full=Homeodomain
           transcription factor HOX5; AltName: Full=OsHox5
 gi|5006855|gb|AAD37698.1|AF145729_1 homeodomain leucine zipper protein [Oryza sativa Indica Group]
 gi|125561547|gb|EAZ06995.1| hypothetical protein OsI_29241 [Oryza sativa Indica Group]
          Length = 350

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 11/130 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 86  KKRRLTAEQVQMLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 141

Query: 86  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTS 142
           +   +  RL+A    L A +  L+ +NDRL+ QV  L  +     Q  + + + AT  T+
Sbjct: 142 QLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEK----LQDKETSPSSATITTA 197

Query: 143 CESVVTSGQH 152
            + V    +H
Sbjct: 198 AQEVDQPDEH 207


>gi|115476422|ref|NP_001061807.1| Os08g0416000 [Oryza sativa Japonica Group]
 gi|75134805|sp|Q6ZA74.1|HOX5_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX5; AltName:
           Full=HD-ZIP protein HOX5; AltName: Full=Homeodomain
           transcription factor HOX5; AltName: Full=OsHox5
 gi|37573050|dbj|BAC98578.1| homeodomain leucine zipper protein [Oryza sativa Japonica Group]
 gi|113623776|dbj|BAF23721.1| Os08g0416000 [Oryza sativa Japonica Group]
 gi|125603415|gb|EAZ42740.1| hypothetical protein OsJ_27319 [Oryza sativa Japonica Group]
          Length = 349

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 11/130 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 86  KKRRLTAEQVQMLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 141

Query: 86  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTS 142
           +   +  RL+A    L A +  L+ +NDRL+ QV  L  +     Q  + + + AT  T+
Sbjct: 142 QLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEK----LQDKETSPSSATITTA 197

Query: 143 CESVVTSGQH 152
            + V    +H
Sbjct: 198 AQEVDQPDEH 207


>gi|33355394|gb|AAQ16127.1| homeodomain protein BNLGHi6863 [Gossypium hirsutum]
          Length = 762

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 8/102 (7%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           +   +Y R+T  Q++ LE ++ ECP P   +R +L +E      ++P+Q+K WFQNRR +
Sbjct: 75  LKKKRYHRHTAHQIQELEAVFKECPHPDDKQRMKLSQEL----GLKPRQVKFWFQNRRTQ 130

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
            K +++ S     +  L A N  L  E  RLQ ++S+LV  N
Sbjct: 131 MKAQQDRSE----DVILRAENDSLKSEFYRLQAELSKLVCPN 168



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 12/206 (5%)

Query: 242 PSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYT---SVLEDGSL 298
           PS     + V+V++   +G++G ++L+Y +L+  + L P R+ + LRY    +V ++   
Sbjct: 348 PSIVARAKCVQVISQGVSGTNGCLQLMYAELHCLSPLVPTREAYFLRYCQQQNVEDETYW 407

Query: 299 VVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV 358
            + +  L+   N       P + R    PSG LI+    G S +  V+H ++E   + ++
Sbjct: 408 AIVDFPLDGFHNSLQT-SFPLYKRR---PSGCLIQDMPNGYSRVTWVEHAEIEEKPIHQI 463

Query: 359 LRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPA-----ALRALSQRLSRG 413
                 S         +A L    +    +   ++   G  P+      L  LSQR+ R 
Sbjct: 464 FSHFVHSGMAFGANRWLAVLERQCERIASLMATNIPDIGVIPSPEARKNLMRLSQRMIRT 523

Query: 414 FNEALNGFTDEGWSMLESDGIDDVTV 439
           F   ++  + + W+ +     D V +
Sbjct: 524 FCVNISSCSGQVWTAVPDSSDDTVRI 549


>gi|357507075|ref|XP_003623826.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355498841|gb|AES80044.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 778

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 14/106 (13%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQL-IRECPILS 64
           SG   D+ D+  +K      +Y R+TP+Q++ LE ++ ECP P   +R +L  R C    
Sbjct: 79  SGDDFDAADNPPRK-----KRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC---- 129

Query: 65  NIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
            +E +Q+K WFQNRR + K   +R E S L+  N KL A N  + E
Sbjct: 130 -LETRQVKFWFQNRRTQMKTQLERHENSLLRQANDKLRAENMSIRE 174



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 111/508 (21%), Positives = 204/508 (40%), Gaps = 108/508 (21%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTGS-SGTI 265
           +G    A+R  G+V ++   + E L D   W            + EV++    G+ +G +
Sbjct: 341 NGFVSEASRESGVVIINSLALVETLMDSNRWSEMFPCVIARSSTTEVISSGINGTRNGAL 400

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +L+  +L   + L P R+   LR+     +G   V + S++  +   +   AP F+    
Sbjct: 401 QLMQAELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSIDTIRE--TSAGAPTFLTCRR 458

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYE----------SSTLIAQKTTM 375
           LPSG +++    G S +  V+H + E   V ++ RPL             +TL  Q   +
Sbjct: 459 LPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSLGMGFGAQRWVATLQRQCECL 518

Query: 376 AALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI- 434
           A L      S+E S  +++  GRR  ++  L+ R++  F   +   T   W+ L +  + 
Sbjct: 519 AILMSSSLPSREHS--AISAGGRR--SMLKLAHRMTNNFCAGVCASTVHKWNKLNAGNVG 574

Query: 435 DDVTVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH- 490
           +DV V    S   P +  G+              VL A  S+ L   P  +   FLR   
Sbjct: 575 EDVRVMTRKSVDDPGEPPGI--------------VLSAATSVWLPASPQKV-FDFLRNEK 619

Query: 491 -RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMA 549
            RSEW     D  S      GP             Q +  +A   +H   + +++   + 
Sbjct: 620 LRSEW-----DILS----NGGPM------------QEMAHIAKGHDHGNCVSLLRASAIN 658

Query: 550 HYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------ASFSDDA--PIIPSG 600
             +  M+      +LQ  S    +A G+   +V+AP+D        +  D A   ++PSG
Sbjct: 659 SSQSSML------ILQETS---TDASGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSG 707

Query: 601 FRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMH 660
           F ++P                      G +    + + ++Q   + S++T+AFQ      
Sbjct: 708 FAVLP---------------------DGHSNGSGNHEDASQPRVSGSLLTVAFQILVNSL 746

Query: 661 LQENVASMARQYVRGIIA-SVQRVALAL 687
               +   + + V  +I+ ++Q++ +AL
Sbjct: 747 PTAKLTVESVETVNNLISCTIQKIKVAL 774


>gi|115474701|ref|NP_001060947.1| Os08g0136100 [Oryza sativa Japonica Group]
 gi|31339107|dbj|BAC77160.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113622916|dbj|BAF22861.1| Os08g0136100, partial [Oryza sativa Japonica Group]
          Length = 130

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 4   RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 59

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E + L+A N KL A N
Sbjct: 60  HERHENNALRAENEKLRAEN 79


>gi|115481134|ref|NP_001064160.1| Os10g0147300 [Oryza sativa Japonica Group]
 gi|113638769|dbj|BAF26074.1| Os10g0147300 [Oryza sativa Japonica Group]
          Length = 108

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/34 (79%), Positives = 31/34 (91%)

Query: 22 MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQ 55
          MD+GKYV+YTP+QVEALER+Y ECPKPS  RRQQ
Sbjct: 46 MDSGKYVQYTPDQVEALERVYAECPKPSFCRRQQ 79


>gi|115448457|ref|NP_001048008.1| Os02g0729700 [Oryza sativa Japonica Group]
 gi|75132062|sp|Q6YWR4.1|HOX16_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX16; AltName:
           Full=HD-ZIP protein HOX16; AltName: Full=Homeodomain
           transcription factor HOX16; AltName: Full=OsHox16
 gi|46390454|dbj|BAD15915.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|46390850|dbj|BAD16354.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|113537539|dbj|BAF09922.1| Os02g0729700 [Oryza sativa Japonica Group]
 gi|125583560|gb|EAZ24491.1| hypothetical protein OsJ_08251 [Oryza sativa Japonica Group]
 gi|215767479|dbj|BAG99707.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 343

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 132

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++  RL+A    L A +  L+++N RL  QV  L 
Sbjct: 133 QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT 170


>gi|187471148|sp|A2X980.1|HOX16_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX16; AltName:
           Full=HD-ZIP protein HOX16; AltName: Full=Homeodomain
           transcription factor HOX16; AltName: Full=OsHox16
 gi|125540995|gb|EAY87390.1| hypothetical protein OsI_08797 [Oryza sativa Indica Group]
          Length = 345

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 79  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 134

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++  RL+A    L A +  L+++N RL  QV  L 
Sbjct: 135 QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT 172


>gi|42562138|ref|NP_564041.2| homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana]
 gi|75264044|sp|Q9LMT8.1|HDG12_ARATH RecName: Full=Homeobox-leucine zipper protein HDG12; AltName:
           Full=HD-ZIP protein HDG12; AltName: Full=Homeodomain
           GLABRA 2-like protein 12; AltName: Full=Homeodomain
           transcription factor HDG12; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 12
 gi|9665069|gb|AAF97271.1|AC034106_14 Strong similarity to meristem L1 layer homeobox protein (ATML1)
           from Arabidopsis thaliana gb|U37589 and contains
           Transposase PF|01527, Homeobox PF|00046, and START
           PF|01852 domains. EST gb|AI995645 comes from this gene
           [Arabidopsis thaliana]
 gi|225897942|dbj|BAH30303.1| hypothetical protein [Arabidopsis thaliana]
 gi|332191531|gb|AEE29652.1| homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana]
          Length = 687

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 15/107 (14%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S++   S  +K      ++ R+TP Q++ LE  ++EC  P   +R QL RE      +
Sbjct: 5   GDSQNHDSSETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSREL----GL 60

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQ 113
            P+QIK WFQNRR ++K + E            A N  L EEND+++
Sbjct: 61  APRQIKFWFQNRRTQKKAQHER-----------ADNCALKEENDKIR 96



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 88/424 (20%), Positives = 169/424 (39%), Gaps = 91/424 (21%)

Query: 220 AARACGLVGLDPTRVAEILKDR-------PSWYRDCRSVEVVNVLPTGSSG-TIELLYMQ 271
           A+R+ G+V  +   + ++L +        PS     +++ V++    G+ G  + L+  +
Sbjct: 271 ASRSSGVVFTNAITLVDMLMNSVKLTELFPSIVASSKTLAVISSGLRGNHGDALHLMIEE 330

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   + L   R+F +LRY   +E G+  +   S          PQ     R+   PSG L
Sbjct: 331 LQVLSPLVTTREFCVLRYCQQIEHGTWAIVNVSY-------EFPQFISQSRSYRFPSGCL 383

Query: 332 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQ 390
           I+    G S +  V+H + E    + E+ + +         +  +A L+ + +    + +
Sbjct: 384 IQDMSNGYSKVTWVEHGEFEEQEPIHEMFKDIVHKGLAFGAERWIATLQRMCERFTNLLE 443

Query: 391 PSVTGW----------GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
           P+ +            G+R  ++  L+ R+   F  ++ G ++   S + S G+D+  + 
Sbjct: 444 PATSSLDLGGVIPSPEGKR--SIMRLAHRMVSNFCLSV-GTSNNTRSTVVS-GLDEFGIR 499

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRS--EWADSS 498
           V S  S+         NG       VLCA  S  L  + P  +  FL++ R+  +W    
Sbjct: 500 VTSHKSR------HEPNGM------VLCAATSFWL-PISPQNVFNFLKDERTRPQW---- 542

Query: 499 IDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHE---EFLEVIKLENMAHYREDM 555
            D  S                    G  +  +AH          + V++  N +  + +M
Sbjct: 543 -DVLS-------------------NGNSVQEVAHITNGSNPGNCISVLRGFNASSSQNNM 582

Query: 556 IMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDA---------PIIPSGFRIIPL 606
           ++  +       S +D ++    A +++ P+D    + A         PI+PSGF I P 
Sbjct: 583 LILQE-------SCIDSSSA---ALVIYTPVDLPALNIAMSGQDTSYIPILPSGFAISPD 632

Query: 607 DSGK 610
            S K
Sbjct: 633 GSSK 636


>gi|224120056|ref|XP_002318231.1| predicted protein [Populus trichocarpa]
 gi|222858904|gb|EEE96451.1| predicted protein [Populus trichocarpa]
          Length = 734

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           KY R+T  Q++ LE  + ECP P   +R +L R       +E KQIK WFQNRR + K  
Sbjct: 40  KYNRHTANQIQELESFFKECPHPDEKQRSELSRRL----GLESKQIKFWFQNRRTQMKTQ 95

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R E   L+  N KL   N+LL +
Sbjct: 96  LERHENVILRQDNDKLRLENELLKQ 120



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 124/293 (42%), Gaps = 34/293 (11%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIELLYMQ 271
           A R  G+V ++ + + E L D   W     S+       +++ +G     SG +++++ +
Sbjct: 296 ATRVSGVVLVNISALVETLMDVNGWVEMFPSLIARAATTDIISSGMGGTKSGALQMIHAE 355

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
               +   P R    LR    L +G   V + S++  Q   +  QAP  V  + LPSG +
Sbjct: 356 FQLISPFVPVRQVKFLRLCKQLTEGVWAVVDVSIDANQENLN-AQAP--VTCKRLPSGCI 412

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQP 391
           I+    G S +  V+H + +  +V ++ RP+  S      +  +AAL+   +    +  P
Sbjct: 413 IQDMNNGCSKVTWVEHSEYDESAVHQLYRPILSSGRGFGAQRWLAALQRYYEGMAMIMSP 472

Query: 392 SVTG-------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI-DDVTVHVNS 443
           S+ G        G + + L+ L++R+   F   +   +   W  L +  + +DV +    
Sbjct: 473 SILGEDQTVINLGGKKSMLK-LARRMVDNFCSGVCASSLHNWGNLVAGNVSEDVRILTRK 531

Query: 444 SPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
           S ++            P   + ++ + A+ +   V    L  FLR+   RS W
Sbjct: 532 SINE------------PGEPDGIVLSAATSVWLPVSRQRLFDFLRDEQSRSHW 572


>gi|312282947|dbj|BAJ34339.1| unnamed protein product [Thellungiella halophila]
          Length = 795

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 29/150 (19%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQL-IRECPILS 64
           SG  +D+ D   +K      +Y R+TP+Q++ LE ++ ECP P   +R +L  R C    
Sbjct: 119 SGEDQDADDKPPRKK-----RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC---- 169

Query: 65  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT 124
            +E +Q+K WFQNRR + K + E              N LL +END+L+        EN 
Sbjct: 170 -LETRQVKFWFQNRRTQMKTQLERHE-----------NALLRQENDKLRA-------ENM 210

Query: 125 FFRQQTQNAATLATTDTSCESVVTSGQHHL 154
             R+  +N         +    V+  +HHL
Sbjct: 211 SIREAMRNPICTNCGGPAMLGDVSLEEHHL 240



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 94/421 (22%), Positives = 166/421 (39%), Gaps = 86/421 (20%)

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYR----DCRSVEVVNVLPTGSSGT----IE 266
           G    A++  G+V ++   + E L D   W      +       +V+  G +GT    ++
Sbjct: 366 GLVTEASKISGMVIINSLALVETLMDSNRWTEMFPCNVARAATTDVISGGMAGTRNGALQ 425

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEML 326
           L+  +L   + L P R+   LR+     +G     + S++  +    +  +P  +R   L
Sbjct: 426 LMNAELQVLSPLVPVRNVNFLRFCKQHAEGVWAAVDVSIDTVRENSGV--SPVIIRR--L 481

Query: 327 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ--- 383
           PSG +++    G S +  V+H + +   +  + RPL  S      +  +A L+  RQ   
Sbjct: 482 PSGCVVQDMSNGYSKVTWVEHAEYDENQIHHLYRPLIRSGLGFGSQRWVATLQ--RQCEC 539

Query: 384 ----ISQEVSQP---SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID- 435
               +S  V+ P   S+T  GR+  ++  L+QR++  F   ++  +   WS L    +D 
Sbjct: 540 LAILMSSSVTSPDNTSITPGGRK--SMLKLAQRMTFNFCSGISAPSVHSWSKLTVGNVDP 597

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSE 493
           DV V    S                  S  +L A  S+ L    P  L  FLR    R E
Sbjct: 598 DVRVMTRKSGED---------------SGIILSAATSVWLP-ASPQRLFDFLRNERMRCE 641

Query: 494 WADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYRE 553
           W     D  S      GP             Q ++ +A   +    + +++   M   + 
Sbjct: 642 W-----DILS----NGGPM------------QEMVHIAKGQDQGNSVSLLRSNPMNANQS 680

Query: 554 DMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRII 604
            M++     L + C  +D +     A +V+AP+D            S    ++PSGF I+
Sbjct: 681 SMLI-----LQETC--IDASG----ALVVYAPVDIPAMNVVMNGGESSYVALLPSGFAIL 729

Query: 605 P 605
           P
Sbjct: 730 P 730


>gi|197116163|dbj|BAG68830.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 137/646 (21%), Positives = 238/646 (36%), Gaps = 135/646 (20%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 83
           R T  Q + LE  Y E P P+  +R +L +      N+   Q+K WFQN+R  EK     
Sbjct: 46  RRTAYQTQELENFYMENPHPTEEQRYELGQRL----NMGVNQVKNWFQNKRNLEKINNDH 101

Query: 84  -----QRKEASRLQAVNRKL-------------TAMN--------KLLMEENDRLQKQVS 117
                 R+E  RL A   +L              A N        + LM EN  L++++ 
Sbjct: 102 LENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENANLEREID 161

Query: 118 QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPR--DASPAGLLSI 175
           Q  + + +     Q    + +T     S  ++   + TP        R  +   +  L++
Sbjct: 162 Q--FNSRYLSHPKQR---MVSTSEQAPSSSSNPGINATPVLDFSGGTRTTEKETSIFLNL 216

Query: 176 AEETLTEFLSKATGTAVEWVQMPGMKPGP---------DSIGIVAISHGCTGVAARACGL 226
           A   L E ++        W+  P ++             S   V    G    A+RA GL
Sbjct: 217 AITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVTKPPGQIVEASRAKGL 276

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTL 278
           V +    + + L D   W      +  V     VL TGS    SG+++ +  +    + L
Sbjct: 277 VPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPL 336

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
            P R    +RY   +  G  VV +  +  TQN   +P    +  ++ LPSG +I     G
Sbjct: 337 VPKRKVTFIRYCKEIRQGLWVVVD--VTPTQNPTLLP----YGCSKRLPSGLIIDDLSNG 390

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQIS-------QEVSQ 390
            S +  ++  +     + ++ +PL      +  K  +A L RH   +S        E+S 
Sbjct: 391 YSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLTEIS- 449

Query: 391 PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMG 450
           P ++  G     +  L+QR++  +   +   + + W            + V +    M  
Sbjct: 450 PGLSAKG--ATEIVKLAQRMTLNYYRGITSPSVDKWQ----------KIQVENVAQNMSF 497

Query: 451 VQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEWADSSIDAYSAAAVK 508
           +    VN    ++  VL A  S+ L  V    L  F+     R EW   + D      ++
Sbjct: 498 MIRKNVNEPGELTGIVLSASTSVWL-PVNQHTLFAFISHLSFRHEWDILTNDTTMEETIR 556

Query: 509 AGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 568
                                +     H   + ++K+ N       M++  +I+      
Sbjct: 557 ---------------------IQKAKRHGNIISLLKIVN-----NGMLVLQEIW------ 584

Query: 569 GVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRIIP 605
               +A G  A +V+AP++ +          SD    +PSGF I+P
Sbjct: 585 ---NDASG--AMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVP 625


>gi|18416569|ref|NP_567722.1| homeobox-leucine zipper protein HDG6 [Arabidopsis thaliana]
 gi|187608874|sp|Q9FVI6.2|FWA_ARATH RecName: Full=Homeobox-leucine zipper protein HDG6; AltName:
           Full=HD-ZIP protein HDG6; AltName: Full=Homeobox protein
           FWA; AltName: Full=Homeodomain GLABRA 2-like protein 6;
           AltName: Full=Homeodomain transcription factor HDG6;
           AltName: Full=Protein HOMEODOMAIN GLABROUS 6
 gi|197116099|dbj|BAG68818.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116131|dbj|BAG68843.1| homeodomain-containing transcription factor FWA [Arabidopsis
           suecica]
 gi|197116137|dbj|BAG68820.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116145|dbj|BAG68824.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116153|dbj|BAG68828.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|332659674|gb|AEE85074.1| homeobox-leucine zipper protein HDG6 [Arabidopsis thaliana]
          Length = 686

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 136/646 (21%), Positives = 239/646 (36%), Gaps = 135/646 (20%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 83
           R T  Q + LE  Y E P P+  +R +L +      N+   Q+K WFQN+R  EK     
Sbjct: 46  RRTAYQTQELENFYMENPHPTEEQRYELGQRL----NMGVNQVKNWFQNKRNLEKINNDH 101

Query: 84  -----QRKEASRLQAVNRKL-------------TAMN--------KLLMEENDRLQKQVS 117
                 R+E  RL A   +L              A N        + LM EN  L++++ 
Sbjct: 102 LENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENANLEREID 161

Query: 118 QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPR--DASPAGLLSI 175
           Q  + + +     Q    + +T     S  ++   + TP        R  +   +  L++
Sbjct: 162 Q--FNSRYLSHPKQR---MVSTSEQAPSSSSNPGINATPVLDFSGGTRTSEKETSIFLNL 216

Query: 176 AEETLTEFLSKATGTAVEWVQMPGMKPGP---------DSIGIVAISHGCTGVAARACGL 226
           A   L E ++        W+  P ++             S   V    G    A+RA GL
Sbjct: 217 AITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVTKPPGQIVEASRAKGL 276

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTL 278
           V +    + + L D   W      +  V     VL TGS    SG+++ +  +    + L
Sbjct: 277 VPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPL 336

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
            P R    +RY   +  G  VV +  +  TQN   +P    +  ++ LPSG +I     G
Sbjct: 337 VPKRKVTFIRYCKEIRQGLWVVVD--VTPTQNPTLLP----YGCSKRLPSGLIIDDLSNG 390

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQIS-------QEVSQ 390
            S +  ++  +     + ++ +PL      +  K  +A L RH   +S        E+S 
Sbjct: 391 YSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLTEIS- 449

Query: 391 PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMG 450
           P ++  G     +  L+QR++  +   +   + + W  ++ + +             M  
Sbjct: 450 PGLSAKG--ATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENV----------AQNMSF 497

Query: 451 VQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEWADSSIDAYSAAAVK 508
           +    VN    ++  VL A  S+ L  V    L  F+     R EW   + D      ++
Sbjct: 498 MIRKNVNEPGELTGIVLSASTSVWL-PVNQHTLFAFISHLSFRHEWDILTNDTTMEETIR 556

Query: 509 AGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 568
                                +     H   + ++K+ N       M++  +I+      
Sbjct: 557 ---------------------IQKAKRHGNIISLLKIVN-----NGMLVLQEIW------ 584

Query: 569 GVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRIIP 605
               +A G  A +V+AP++ +          SD    +PSGF I+P
Sbjct: 585 ---NDASG--AMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVP 625


>gi|197116139|dbj|BAG68821.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 136/646 (21%), Positives = 240/646 (37%), Gaps = 135/646 (20%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 83
           R T  Q + LE  Y E P P+  +R +L +      N+   Q+K WFQN+R  EK     
Sbjct: 46  RRTAYQTQELENFYMENPHPTEEQRYELGQRL----NMGVNQVKNWFQNKRNLEKINNDH 101

Query: 84  -----QRKEASRLQAVNRKL-------------TAMN--------KLLMEENDRLQKQVS 117
                 R+E  RL A   +L              A N        + LM EN  L++++ 
Sbjct: 102 LENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGNTEYEVQKLMAENANLEREID 161

Query: 118 QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPR--DASPAGLLSI 175
           Q  + + +  +  Q    L +T     S  ++   + TP        R  +   +  L++
Sbjct: 162 Q--FNSRYLSRPKQR---LVSTSEQAPSSSSNPGINATPVLDFSGGTRTSEKETSIFLNL 216

Query: 176 AEETLTEFLSKATGTAVEWVQMPGMKPGP---------DSIGIVAISHGCTGVAARACGL 226
           A   L E ++        W+  P ++             S   V    G    A+RA GL
Sbjct: 217 AITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVTKPPGQIVEASRAKGL 276

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTL 278
           V +    + + L D   W      +  V     V+ TGS    SG+++ +  +    + L
Sbjct: 277 VPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVISTGSGGTKSGSLQQIQAEFQVISPL 336

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
            P R    +RY   +  G  VV +  +  TQN   +P    +  ++ LPSG +I     G
Sbjct: 337 VPKRKVTFIRYCKEIRQGLWVVVD--VTPTQNPTLLP----YGCSKRLPSGLIIDDLSNG 390

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQIS-------QEVSQ 390
            S +  ++  +     + ++ +PL      +  K  +A L RH   +S        E+S 
Sbjct: 391 YSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLTEIS- 449

Query: 391 PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMG 450
           P ++  G     +  L+QR++  +   +   + + W  ++ + +             M  
Sbjct: 450 PGLSAKG--ATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENV----------AQNMSF 497

Query: 451 VQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEWADSSIDAYSAAAVK 508
           +    VN    ++  VL A  S+ L  V    L  F+     R EW   + D      ++
Sbjct: 498 MIRKNVNEPGELTGIVLSASTSVWL-PVNQHTLFAFISHLSFRHEWDILTNDTTMEETIR 556

Query: 509 AGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 568
                                +     H   + ++K+ N       M++  +I+      
Sbjct: 557 ---------------------IQKAKRHGNIISLLKIVN-----NGMLVLQEIW------ 584

Query: 569 GVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRIIP 605
               +A G  A +V+AP++ +          SD    +PSGF I+P
Sbjct: 585 ---NDASG--AMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVP 625


>gi|5050910|emb|CAB45018.1| homeodomain GLABRA2 like 1 protein [Arabidopsis thaliana]
          Length = 808

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP+Q++ LE ++ EC  P   +R  L R      N++P+Q+K WFQNRR + K  
Sbjct: 113 RYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRL----NLDPRQVKFWFQNRRTQMKTQ 168

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R E + L+  N KL A N  + E
Sbjct: 169 IERHENALLRQENDKLRAENMSVRE 193



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 124/308 (40%), Gaps = 41/308 (13%)

Query: 203 GPDSIGIVAISHGCTG-VAARACGLVG--LDPTRVAEILKDRPSWYRDCRSVEVVNVLPT 259
           GP   G V+ +    G V   +  LV   +D  R AE+    PS      + E+++    
Sbjct: 364 GPKQDGFVSEASKEAGTVIINSLALVETLMDSERWAEMF---PSMVSRTSTTEIISSGMG 420

Query: 260 GSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
           G +G + L++ +L   + L P R    LR+     +G   V + S+++ + G S      
Sbjct: 421 GRNGALHLMHAELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS---- 476

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR 379
                 LPSG L++    G S +  ++H + +   +  + RPL            MAAL+
Sbjct: 477 ---CRRLPSGCLVQDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQ 533

Query: 380 HLRQ-------ISQEVS---QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSML 429
             RQ       +S  VS    PS      R + L+ L++R++  F   +   + + WS L
Sbjct: 534 --RQCECLTILMSSTVSTSTNPSPINCNGRKSMLK-LAKRMTDNFCGGVCASSLQKWSKL 590

Query: 430 ESDGID-DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
               +D DV +    S           VN  P     ++   A+ +   V P  L  FL 
Sbjct: 591 NVGNVDKDVRIMTRKS-----------VNN-PGEPPGIILNAATSVWMPVSPRRLFDFLG 638

Query: 489 EH--RSEW 494
               RSEW
Sbjct: 639 NERLRSEW 646


>gi|15233048|ref|NP_191674.1| homeobox-leucine zipper protein HDG1 [Arabidopsis thaliana]
 gi|75335834|sp|Q9M2E8.1|HDG1_ARATH RecName: Full=Homeobox-leucine zipper protein HDG1; AltName:
           Full=HD-ZIP protein HDG1; AltName: Full=Homeodomain
           GLABRA 2-like protein 1; AltName: Full=Homeodomain
           transcription factor HDG1; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 1
 gi|6850882|emb|CAB71045.1| homeobox protein [Arabidopsis thaliana]
 gi|15292865|gb|AAK92803.1| putative homeobox protein [Arabidopsis thaliana]
 gi|20465805|gb|AAM20391.1| putative homeobox protein [Arabidopsis thaliana]
 gi|332646640|gb|AEE80161.1| homeobox-leucine zipper protein HDG1 [Arabidopsis thaliana]
          Length = 808

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP+Q++ LE ++ EC  P   +R  L R      N++P+Q+K WFQNRR + K  
Sbjct: 113 RYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRL----NLDPRQVKFWFQNRRTQMKTQ 168

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R E + L+  N KL A N  + E
Sbjct: 169 IERHENALLRQENDKLRAENMSVRE 193



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 124/308 (40%), Gaps = 41/308 (13%)

Query: 203 GPDSIGIVAISHGCTG-VAARACGLVG--LDPTRVAEILKDRPSWYRDCRSVEVVNVLPT 259
           GP   G V+ +    G V   +  LV   +D  R AE+    PS      + E+++    
Sbjct: 364 GPKQDGFVSEASKEAGTVIINSLALVETLMDSERWAEMF---PSMVSRTSTTEIISSGMG 420

Query: 260 GSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
           G +G + L++ +L   + L P R    LR+     +G   V + S+++ + G S      
Sbjct: 421 GRNGALHLMHAELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS---- 476

Query: 320 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR 379
                 LPSG L++    G S +  ++H + +   +  + RPL            MAAL+
Sbjct: 477 ---CRRLPSGCLVQDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQ 533

Query: 380 HLRQ-------ISQEVS---QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSML 429
             RQ       +S  VS    PS      R + L+ L++R++  F   +   + + WS L
Sbjct: 534 --RQCECLTILMSSTVSTSTNPSPINCNGRKSMLK-LAKRMTDNFCGGVCASSLQKWSKL 590

Query: 430 ESDGID-DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
               +D DV +    S           VN  P     ++   A+ +   V P  L  FL 
Sbjct: 591 NVGNVDEDVRIMTRKS-----------VNN-PGEPPGIILNAATSVWMPVSPRRLFDFLG 638

Query: 489 EH--RSEW 494
               RSEW
Sbjct: 639 NERLRSEW 646


>gi|297817426|ref|XP_002876596.1| hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322434|gb|EFH52855.1| hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 811

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 11/105 (10%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           SG   D+ D    + +    +Y R+TP+Q++ LE ++ EC  P   +R  L R      N
Sbjct: 100 SGDDLDTSD----RPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRL----N 151

Query: 66  IEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
           ++P+Q+K WFQNRR + K   +R E + L+  N KL A N  + E
Sbjct: 152 LDPRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMSVRE 196



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 120/301 (39%), Gaps = 43/301 (14%)

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDR-------PSWYRDCRSVEVVNVLPTGS-SGTIE 266
           G    A++  G V ++   + E L D        PS      + E+++    GS +G + 
Sbjct: 369 GYVSEASKEAGTVIINSLALVETLMDSERWAEMFPSMISRTSTTEIISSGMGGSRNGALH 428

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEML 326
           L++ +L   + L P R    LR+     +G   V + S+++ + G S            L
Sbjct: 429 LMHAELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS-------CRRL 481

Query: 327 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ--- 383
           PSG L++    G S +  ++H + +   +  + RPL            MAAL+  RQ   
Sbjct: 482 PSGCLVQDMANGCSKVTWIEHTEYDENRIHRLYRPLLSCGLAFGAHRWMAALQ--RQCEC 539

Query: 384 ----ISQEVS---QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID- 435
               +S  VS    P+      R + L+ L++R++  F   +   + + WS L    +D 
Sbjct: 540 LTILMSSTVSPSPNPTPINCNGRKSMLK-LAKRMTDNFCGGVCASSLQKWSKLNVGNVDE 598

Query: 436 DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSE 493
           DV +    S           VN  P     ++   A+ +   + P  L  FL     RSE
Sbjct: 599 DVRIMTRKS-----------VNN-PGEPPGIILNAATSVWMPISPRRLFDFLGNERLRSE 646

Query: 494 W 494
           W
Sbjct: 647 W 647


>gi|293336846|ref|NP_001169496.1| uncharacterized protein LOC100383369 [Zea mays]
 gi|224029677|gb|ACN33914.1| unknown [Zea mays]
          Length = 339

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 74  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 129

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++  RL+A    L A +  L+++N RL+ QV  L 
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNHRLRSQVVSLT 167


>gi|413923850|gb|AFW63782.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 339

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 74  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 129

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++  RL+A    L A +  L+++N RL+ QV  L 
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNHRLRSQVVSLT 167


>gi|356575937|ref|XP_003556092.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 731

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K  
Sbjct: 35  RYHRHTPHQIQELEAFFKECPHPDEKQRLDLSKRL----GLENKQVKFWFQNRRTQMKTQ 90

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R E   L+  N KL A N L+ E
Sbjct: 91  LERHENIMLRQENDKLRAENSLIKE 115



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 83/414 (20%), Positives = 160/414 (38%), Gaps = 77/414 (18%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-----DCRSVEVVNVLPTGSSGT----IELLYM 270
           A R  G+V ++   + E L D   W         R++ + +V+  G  GT    +++++ 
Sbjct: 297 ATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINL-DVISNGMGGTRNGALQVMHA 355

Query: 271 QLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGY 330
           ++   + L P R    +R+     +G   V + S+   + G     A   +    LPSG 
Sbjct: 356 EVQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSI---EIGHDAANAQPSISCRRLPSGC 412

Query: 331 LIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH--------LR 382
           +++    G S +  ++H + +   V ++ RPL  S         +A L+         + 
Sbjct: 413 IVQDMPNGYSKVTWLEHWEYDENVVHQLYRPLLSSGVGFGAHRWIATLQRQCECLAILMS 472

Query: 383 QISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN 442
                 S  +++  GRR  ++  L+QR++  F   +   +   W           ++H+ 
Sbjct: 473 SSISSDSHTALSQAGRR--SMLKLAQRMTSNFCSGVCASSARKWD----------SLHIG 520

Query: 443 SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSID 500
           +    M  +    V+  P     ++ + A+ +   V    L  FLR+   RSEW     D
Sbjct: 521 TLGDDMKVMTRKNVDD-PGEPPGIVLSAATSVWMPVSRQRLFDFLRDERLRSEW-----D 574

Query: 501 AYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSD 560
             S      GP             Q ++ +A    H   + +++   +      M++  +
Sbjct: 575 ILS----NGGPM------------QEMVHIAKGQGHGNCVSLLRANAVNANDSSMLILQE 618

Query: 561 IFLLQLCSGVDENAVGNCAELVFAPIDA-------SFSDDA--PIIPSGFRIIP 605
            ++   CS V           V+AP+D        S  D A   ++PSGF I+P
Sbjct: 619 TWMDASCSVV-----------VYAPVDVQSLNVVMSGGDSAYVALLPSGFAILP 661


>gi|197116165|dbj|BAG68831.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 136/646 (21%), Positives = 239/646 (36%), Gaps = 135/646 (20%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 83
           R T  Q + LE  Y E P P+  +R +L +      N+   Q+K WFQN+R  EK     
Sbjct: 46  RRTAYQTQELENFYMENPHPTEEQRYELGQRL----NMGVNQVKNWFQNKRNLEKINNDH 101

Query: 84  -----QRKEASRLQAVNRKL-------------TAMN--------KLLMEENDRLQKQVS 117
                 R+E  RL A   +L              A N        + LM EN  L++++ 
Sbjct: 102 LENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENANLEREID 161

Query: 118 QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPR--DASPAGLLSI 175
           Q  + + +     Q    + +T     S  ++   + TP        R  +   +  L++
Sbjct: 162 Q--FNSRYLSHPKQR---MVSTSEQAPSSSSNPGINATPVLDFSGGTRTSEKETSIFLNL 216

Query: 176 AEETLTEFLSKATGTAVEWVQMPGMKPGP---------DSIGIVAISHGCTGVAARACGL 226
           A   L E ++        W+  P ++             S   V    G    A+RA GL
Sbjct: 217 AITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVTKPPGQIVEASRAKGL 276

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTL 278
           V +    + + L D   W      +  V     VL TGS    SG+++ +  +    + L
Sbjct: 277 VPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPL 336

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
            P R    +RY   +  G  VV +  +  TQN   +P    +  ++ LPSG +I     G
Sbjct: 337 VPKRKVTFIRYCKEIRQGLWVVVD--VTPTQNPTLLP----YGCSKRLPSGLIIDDLSNG 390

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQIS-------QEVSQ 390
            S +  ++  +     + ++ +PL      +  K  +A L RH   +S        E+S 
Sbjct: 391 YSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLTEIS- 449

Query: 391 PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMG 450
           P ++  G     +  L+QR++  +   +   + + W  ++ + +             M  
Sbjct: 450 PGLSAKG--ATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENV----------AQNMSF 497

Query: 451 VQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEWADSSIDAYSAAAVK 508
           +    VN    ++  VL A  S+ L  V    L  F+     R EW   + D      ++
Sbjct: 498 MIRKNVNEPGELTGIVLSASTSVWL-PVNQHTLFAFISHLSFRHEWDILTNDTTMEETIQ 556

Query: 509 AGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 568
                                +     H   + ++K+ N       M++  +I+      
Sbjct: 557 ---------------------IQKAKRHGNIISLLKIVN-----NGMLVLQEIW------ 584

Query: 569 GVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRIIP 605
               +A G  A +V+AP++ +          SD    +PSGF I+P
Sbjct: 585 ---NDASG--AMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVP 625


>gi|51872287|gb|AAU12247.1| homeodomain protein HOX3 [Gossypium hirsutum]
          Length = 713

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K   
Sbjct: 31  YHRHTAHQIQRLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQH 86

Query: 84  QRKEASRLQAVNRKLTAMNKLLME 107
           +R + S L+A N K+   N  + E
Sbjct: 87  ERADNSALRAENDKIRCENIAIRE 110



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 113/513 (22%), Positives = 198/513 (38%), Gaps = 130/513 (25%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----IELLYMQ 271
           A+R  G+V ++   + ++  D   W     ++    + + V+  G  GT    ++L+Y +
Sbjct: 283 ASRDSGVVIMNGLALVDMFMDSNKWLELFPTIVSIAKTIEVISPGMLGTHRCSLQLMYEE 342

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   + L P R+F+ LRY   +E G   +   S +       +PQ     R+  LPSG L
Sbjct: 343 LQVLSPLVPTREFYTLRYCQQIEQGLWAIVNVSYD-------LPQFASQCRSHRLPSGCL 395

Query: 332 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTLIAQKTTMAALRHL--------- 381
           I+    G S +  ++ +++E  + +  + R L  S +    +  +  L+ +         
Sbjct: 396 IQDMPNGYSKVTWLERVEIEDKTPIHRLYRDLVHSGSAFGAERWLTTLQRMCEWFACLRV 455

Query: 382 -----RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEAL---NGFTDEGWSMLESDG 433
                R +   +  P     GRR  ++  L+QR+   F  ++   N       S     G
Sbjct: 456 SSTSTRDLGGVIPSPE----GRR--SMMKLAQRMVNNFCTSVGTSNSHRSTTLSGSNEVG 509

Query: 434 IDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRS- 492
           +  VTVH +S P +  G+ LS                A+     V P  +  F ++ R+ 
Sbjct: 510 V-RVTVHKSSDPGQPNGIVLS---------------AATTFWLPVSPQNVFNFFKDERTR 553

Query: 493 -EWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEE---FLEVIKLENM 548
            +W     D  S                    G  +  +AH          + V++  N 
Sbjct: 554 PQW-----DVLS-------------------NGNAVQEVAHIANGSHPGNCISVLRAFNT 589

Query: 549 AHYREDMIMPSDIFLLQLCSGVDENAVGNCAEL-VFAPID------ASFSDD---APIIP 598
           +H        +++ +LQ      E+ + +   L V+ P+D      A   +D    P++P
Sbjct: 590 SH--------NNMLILQ------ESCIDSSGSLVVYCPVDLPAINVAMSGEDPSYIPLLP 635

Query: 599 SGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCG--STKSVITIAFQFA 656
           SGF I P                   LE    G+ AS  SST  G  S  S+IT+AFQ  
Sbjct: 636 SGFTITP----------------DGHLE---QGDGASTSSSTGHGRSSGGSLITVAFQIL 676

Query: 657 FEMHLQENVASMARQYVRGIIA-SVQRVALALS 688
                   +   +   V  +IA +VQ++  AL+
Sbjct: 677 VSSLPSAKLNLDSVTIVNNLIANTVQQIKAALN 709


>gi|449530169|ref|XP_004172068.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like, partial [Cucumis sativus]
          Length = 468

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 102 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 157

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E ++L+  N KL A N
Sbjct: 158 HERHENTQLRTENEKLRADN 177



 Score = 43.9 bits (102), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 15/141 (10%)

Query: 208 GIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSG 263
           GI     G    A+R   +V ++   + EIL D   W      +      + VL TG +G
Sbjct: 334 GIGPKPSGFKCEASRESAVVIMNHINLVEILMDVNQWSTLFSGIVSRAMTLEVLSTGVAG 393

Query: 264 T----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPH 319
                ++++  +   P+ L P R+ + +RY     DG+ VV + SL++ +  P       
Sbjct: 394 NYNGALQVMTSEFQVPSPLVPTRESYYVRYCKQHGDGTWVVVDVSLDDLRPTPG------ 447

Query: 320 FVRAEMLPSGYLIRPCEGGGS 340
            VR    PSG LI+    G S
Sbjct: 448 -VRCRRRPSGCLIQEMPNGYS 467


>gi|297608080|ref|NP_001061150.2| Os08g0187500 [Oryza sativa Japonica Group]
 gi|255678202|dbj|BAF23064.2| Os08g0187500 [Oryza sativa Japonica Group]
          Length = 326

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 109 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 164

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R E ++L+A N KL A N    E
Sbjct: 165 HERHENAQLRAENDKLRAENMRYKE 189


>gi|222612441|gb|EEE50573.1| hypothetical protein OsJ_30722 [Oryza sativa Japonica Group]
          Length = 178

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/34 (79%), Positives = 31/34 (91%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQ 55
           MD+GKYV+YTP+QVEALER+Y ECPKPS  RRQQ
Sbjct: 116 MDSGKYVQYTPDQVEALERVYAECPKPSFCRRQQ 149


>gi|449523245|ref|XP_004168634.1| PREDICTED: homeobox-leucine zipper protein HDG11-like, partial
           [Cucumis sativus]
          Length = 324

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 30/144 (20%)

Query: 12  SRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQI 71
           S D  G+K       Y R+ P Q++ LE  + +CP P   +R+QL RE      +E KQI
Sbjct: 18  SNDRKGKKT------YHRHNPYQIQQLESFFRQCPHPDENQRRQLSREL----GLETKQI 67

Query: 72  KVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME----------------ENDRL 112
           K WFQN+R + K   +R + S L+  N K+   N  + E                E +R 
Sbjct: 68  KFWFQNKRTQTKAQNERADNSSLRTENEKIQCENLAIREALRNVICPSCGGPPFGEEER- 126

Query: 113 QKQVSQLVYENTFFRQQTQNAATL 136
           Q+ + +L  EN+  +++ +  + L
Sbjct: 127 QRNLQKLRLENSHLKEEHEKVSNL 150


>gi|197116191|dbj|BAG68835.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. petraea]
          Length = 690

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 105/462 (22%), Positives = 178/462 (38%), Gaps = 72/462 (15%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 83
           R+T  Q + LE  Y E   P+  +R +L +      N+EPKQ+K WFQN+R + K     
Sbjct: 48  RHTAYQTQELENFYLENTLPTEDQRYELGQRL----NMEPKQVKFWFQNKRNQMKINSDH 103

Query: 84  -----QRKEASRLQAVNRKL-TAMNKLLMEENDR------LQKQVSQLVYENTFFRQQTQ 131
                 R++  RL     +L +AM         R      +  +V +L+ ENT   ++  
Sbjct: 104 LENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLIVENTILEREI- 162

Query: 132 NAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASP----AGLLSIAEETLTEFLSKA 187
           N           + +V+  Q    P     +P  +A+P     G     E+  + FL  A
Sbjct: 163 NQLYSKIPSRPNQMLVSPSQ---PPHCSSSNPGINATPELGLGGGTRTTEKERSMFLDLA 219

Query: 188 TGTAVEWVQMPGMK---PGPDSIGIVAISH----------------GCTGVAARACGLVG 228
                E +++  M       DS    A+S                 G    A+R  GLV 
Sbjct: 220 IKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREIGLVP 279

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTLAP 280
           +    + +   D   W      +  V     V+PTGS    SG+++L+  +    + L P
Sbjct: 280 MTCLTLVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVISPLVP 339

Query: 281 ARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGS 340
            R    LRY   L  G  VV + + +  QN   +       R   LPSG  I     G S
Sbjct: 340 KRQVTFLRYCKELRHGLWVVVDVTPD--QNPTLLSDGGSINR---LPSGLFIEDMANGYS 394

Query: 341 IIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQ-------EVSQPS 392
            +  ++  +     +  + +PL  S   +     +A L RH   +S        E+S P 
Sbjct: 395 QVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLAEIS-PG 453

Query: 393 VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           ++  G   + +  L+QR++  +   +   +   W  ++ + +
Sbjct: 454 LSAKG--ASEVVKLAQRMTLNYYTGITSSSGNKWEKIQVENV 493


>gi|197116189|dbj|BAG68834.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. petraea]
          Length = 690

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 105/462 (22%), Positives = 178/462 (38%), Gaps = 72/462 (15%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 83
           R+T  Q + LE  Y E   P+  +R +L +      N+EPKQ+K WFQN+R + K     
Sbjct: 48  RHTAYQTQELENFYLENTLPTEDQRYELGQRL----NMEPKQVKFWFQNKRNQMKINSDH 103

Query: 84  -----QRKEASRLQAVNRKL-TAMNKLLMEENDR------LQKQVSQLVYENTFFRQQTQ 131
                 R++  RL     +L +AM         R      +  +V +L+ ENT   ++  
Sbjct: 104 LENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATNCGDIDYEVQKLIVENTILEREI- 162

Query: 132 NAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASP----AGLLSIAEETLTEFLSKA 187
           N           + +V+  Q    P     +P  +A+P     G     E+  + FL  A
Sbjct: 163 NQLYSKIPSRPNQMLVSPSQ---PPHCSSSNPGINATPELGLGGGTRTTEKERSMFLDLA 219

Query: 188 TGTAVEWVQMPGMK---PGPDSIGIVAISH----------------GCTGVAARACGLVG 228
                E +++  M       DS    A+S                 G    A+R  GLV 
Sbjct: 220 IKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVTKPPGHVVEASREIGLVP 279

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTLAP 280
           +    + +   D   W      +  V     V+PTGS    SG+++L+  +    + L P
Sbjct: 280 MTCLTLVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVISPLVP 339

Query: 281 ARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGS 340
            R    LRY   L  G  VV + + +  QN   +       R   LPSG  I     G S
Sbjct: 340 KRQVTFLRYCKELRHGLWVVVDVTPD--QNPTLLSDGGSINR---LPSGLFIEDMANGYS 394

Query: 341 IIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQ-------EVSQPS 392
            +  ++  +     +  + +PL  S   +     +A L RH   +S        E+S P 
Sbjct: 395 QVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLAEIS-PG 453

Query: 393 VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           ++  G   + +  L+QR++  +   +   +   W  ++ + +
Sbjct: 454 LSAKG--ASEVVKLAQRMTLNYYTGITSSSGNKWEKIQVENV 493


>gi|9957277|gb|AAG09302.1| homeobox protein [Arabidopsis thaliana]
 gi|13506820|gb|AAK28350.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116135|dbj|BAG68819.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116141|dbj|BAG68822.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116143|dbj|BAG68823.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116147|dbj|BAG68825.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116149|dbj|BAG68826.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116161|dbj|BAG68829.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 135/646 (20%), Positives = 239/646 (36%), Gaps = 135/646 (20%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 83
           R T  Q + LE  Y E P P+  +R +L +      N+   Q+K WFQN+R  EK     
Sbjct: 46  RRTAYQTQELENFYMENPHPTEEQRYELGQRL----NMGVNQVKNWFQNKRNLEKINNDH 101

Query: 84  -----QRKEASRLQAVNRKL-------------TAMN--------KLLMEENDRLQKQVS 117
                 R+E  RL A   +L              A N        + LM EN  L++++ 
Sbjct: 102 LENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENANLEREID 161

Query: 118 QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPR--DASPAGLLSI 175
           Q  + + +     Q    + +T     S  ++   + TP        R  +   +  L++
Sbjct: 162 Q--FNSRYLSHPKQR---MVSTSEQAPSSSSNPGINATPVLDFSGGTRTSEKETSIFLNL 216

Query: 176 AEETLTEFLSKATGTAVEWVQMPGMKPGP---------DSIGIVAISHGCTGVAARACGL 226
           A   L E ++        W+  P ++             S   V    G    A+RA GL
Sbjct: 217 AITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVTKPPGQIVEASRAKGL 276

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTL 278
           V +    + + L D   W      +  V     V+ TGS    SG+++ +  +    + L
Sbjct: 277 VPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVISTGSGGTKSGSLQQIQAEFQVISPL 336

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
            P R    +RY   +  G  VV +  +  TQN   +P    +  ++ LPSG +I     G
Sbjct: 337 VPKRKVTFIRYCKEIRQGLWVVVD--VTPTQNPTLLP----YGCSKRLPSGLIIDDLSNG 390

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQIS-------QEVSQ 390
            S +  ++  +     + ++ +PL      +  K  +A L RH   +S        E+S 
Sbjct: 391 YSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLTEIS- 449

Query: 391 PSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMG 450
           P ++  G     +  L+QR++  +   +   + + W  ++ + +             M  
Sbjct: 450 PGLSAKG--ATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENV----------AQNMSF 497

Query: 451 VQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEWADSSIDAYSAAAVK 508
           +    VN    ++  VL A  S+ L  V    L  F+     R EW   + D      ++
Sbjct: 498 MIRKNVNEPGELTGIVLSASTSVWL-PVNQHTLFAFISHLSFRHEWDILTNDTTMEETIR 556

Query: 509 AGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCS 568
                                +     H   + ++K+ N       M++  +I+      
Sbjct: 557 ---------------------IQKAKRHGNIISLLKIVN-----NGMLVLQEIW------ 584

Query: 569 GVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRIIP 605
               +A G  A +V+AP++ +          SD    +PSGF I+P
Sbjct: 585 ---NDASG--AMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVP 625


>gi|357143608|ref|XP_003572981.1| PREDICTED: homeobox-leucine zipper protein HOX16-like [Brachypodium
           distachyon]
          Length = 340

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LE+ + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 80  KKRRLTPEQVHLLEKSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 135

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++  RL+A    L A +  L+++N RL+ QV  L 
Sbjct: 136 TLERDFDRLKASFDALRADHDALLQDNHRLRSQVVTLT 173


>gi|413923851|gb|AFW63783.1| putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 1 [Zea mays]
 gi|413923852|gb|AFW63784.1| putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 2 [Zea mays]
          Length = 299

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 34  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 89

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++  RL+A    L A +  L+++N RL+ QV  L 
Sbjct: 90  QLERDFDRLKASFDALRADHDALLQDNHRLRSQVVSLT 127


>gi|15983360|gb|AAL11548.1|AF424554_1 At1g17920/F2H15_22 [Arabidopsis thaliana]
 gi|24111361|gb|AAN46804.1| At1g17920/F2H15_22 [Arabidopsis thaliana]
          Length = 406

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 22/135 (16%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           G S++   S  +K      ++ R+TP Q++ LE  ++EC  P   +R QL RE      +
Sbjct: 5   GDSQNHDSSETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSREL----GL 60

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF 126
            P+QIK WFQNRR ++K + E            A N  L EEND+++        EN   
Sbjct: 61  APRQIKFWFQNRRTQKKAQHE-----------RADNCALKEENDKIR-------CENIAI 102

Query: 127 RQQTQNAATLATTDT 141
           R+  ++A   +  D+
Sbjct: 103 REAIKHAICPSCGDS 117


>gi|449534134|ref|XP_004174022.1| PREDICTED: homeobox-leucine zipper protein ROC2-like, partial
           [Cucumis sativus]
          Length = 169

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 7/80 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+T  Q++ +E  + ECP P   +R +L RE      +EP Q+K WFQN+R + K  
Sbjct: 52  RYNRHTQHQIQEMEAFFKECPHPDDKQRMELSREL----GLEPLQVKFWFQNKRTQMKAQ 107

Query: 84  -QRKEASRLQAVNRKLTAMN 102
            +R E + L+A N KL A N
Sbjct: 108 HERHENAILKAENEKLRAEN 127


>gi|225441050|ref|XP_002283931.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51 [Vitis
           vinifera]
 gi|297740036|emb|CBI30218.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 10/127 (7%)

Query: 23  DNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCRE 82
           +  K  R T EQ+E+LER + E  K    R+ +L RE      ++P+QI VWFQNRR R 
Sbjct: 57  NQEKKKRLTNEQLESLERSFQEEIKLEPDRKMKLAREL----GLQPRQIAVWFQNRRARW 112

Query: 83  KQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTS 142
           K  KE  RL  V   L     L+ +E  +LQ++VS+L  +     Q T+   ++  T+ S
Sbjct: 113 KT-KELERLYDV---LKQEYDLMSKEKQKLQEEVSKL--KGILREQATRKQVSMGYTEVS 166

Query: 143 CESVVTS 149
            E  V S
Sbjct: 167 GEETVES 173


>gi|293331325|ref|NP_001169573.1| uncharacterized protein LOC100383453 [Zea mays]
 gi|224030161|gb|ACN34156.1| unknown [Zea mays]
          Length = 487

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 92/422 (21%), Positives = 170/422 (40%), Gaps = 85/422 (20%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----I 265
           +G    A+R   +V +    + EIL D   +     S+      + VL TG +G     +
Sbjct: 48  YGLNSEASRDSAVVIMTHANLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGNYNGAL 107

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +++ ++   P+ L P R+ + +RY     DG+  V + SL+  + G         ++   
Sbjct: 108 QVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDGLRPGA-------VLKCRR 160

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQI 384
            PSG LI+    G S +  V+H++++  SV  + + L  S      +  +  L R   ++
Sbjct: 161 RPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHSIYKLLVSSGLAFGARRWVGTLDRQCERL 220

Query: 385 SQEVSQ--PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           +  ++   P+     +T    R + L+ L++R+   F   +       W+ L   G +DV
Sbjct: 221 ASVMASNIPTSDIGVITSAEGRKSMLK-LAERMVMSFCGGVTASAAHQWTTLSGSGAEDV 279

Query: 438 TVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RS 492
            V    S   P +  G+              VL A  S  L  VPP  +  FLR+   RS
Sbjct: 280 RVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-VPPKRVFDFLRDESSRS 324

Query: 493 EWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYR 552
           EW     D  S   V                 Q +  +A+  +H   + ++++ +    +
Sbjct: 325 EW-----DILSNGGVV----------------QEMAHIANGRDHGNCVSLLRVNSTNSNQ 363

Query: 553 EDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRI 603
             M++     L + C+ +  + V      ++AP+D             D   ++PSGF I
Sbjct: 364 SSMLI-----LQESCTDMSGSYV------IYAPVDVVAMNVVLNGGDPDYVALLPSGFAI 412

Query: 604 IP 605
           +P
Sbjct: 413 LP 414


>gi|293332723|ref|NP_001170002.1| uncharacterized protein LOC100383907 [Zea mays]
 gi|224032821|gb|ACN35486.1| unknown [Zea mays]
          Length = 418

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 84/389 (21%), Positives = 164/389 (42%), Gaps = 84/389 (21%)

Query: 270 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN-----------------TQNGP 312
           +Q+++P  L  + +F  LRYT  + +G   V + S++                    NG 
Sbjct: 5   LQVHSPRLLNRSINF--LRYTKRVAEGRWAVMDVSVDGILGPPGSRVADAAAAAAAANGV 62

Query: 313 SMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQK 372
           ++  A  +    +LPSG L+     G   +  V H + +  +VP + RPL+ S   +   
Sbjct: 63  TLVPA-WYTGCRLLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRSGKALGAH 121

Query: 373 TTMAALR---------HLRQISQ--EVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGF 421
             +A+L+         H  Q+S+  + +  +++  G+R   +  L+QR+   F  A++G 
Sbjct: 122 RWLASLQRQCEFLAVLHSSQVSRGGDNTAAAISSMGKR--GVLELAQRMVADFYSAVSGP 179

Query: 422 TDEGWSMLESDGIDDVTVHVNSSPSKM-MGVQLSYVNGFPSMSNAVLCAKASMLLQDVPP 480
             +      S  ID+      +   +    V++       ++++ VL A  ++ L + PP
Sbjct: 180 VTQ-----PSSSIDEWYGSAGAGARRTDTAVRMVTSKKAGTVADLVLSASTTVWLPNTPP 234

Query: 481 AILLRFLRE--HRSEWADSSIDAY--SAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEH 536
            ++ R+LR+   R EW     DA+  S+AAV    CS+P    G+  G  +  L   +  
Sbjct: 235 QLVFRYLRDDQRRGEW-----DAFFASSAAVTE-LCSVPT---GHLNGNAVSVLYSNVT- 284

Query: 537 EEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------AS 589
                           +       + L + C+        +C+ +V+AP++        +
Sbjct: 285 ----------------DGTDRKKTLILQEACTD------ASCSMVVYAPVEEDSMRAVMN 322

Query: 590 FSDDAPI--IPSGFRIIPLDSGKDTPSPN 616
             D A +  +PSGF ++P   G+   +P+
Sbjct: 323 GGDHASVFLLPSGFAVLPDGHGRARHAPS 351


>gi|226505158|ref|NP_001146068.1| uncharacterized protein LOC100279599 [Zea mays]
 gi|219885547|gb|ACL53148.1| unknown [Zea mays]
 gi|414870569|tpg|DAA49126.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 270

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 132

Query: 86  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTS 142
           +   +  RL+A    L A ++ L+ +ND L+ QV  +        ++T  +AT+A  +  
Sbjct: 133 QLETDYDRLKAAYNALAADHQGLLADNDSLRAQV--ICLTEKLQGKETSLSATIAAQEVD 190

Query: 143 CESVVTSGQHHLTPQQQHQ--HPPRDASPAGLLSIAEE 178
             +  T+G   L  QQ     H     +  G LS  EE
Sbjct: 191 QPNEHTTGTEKLLAQQLKDDLHSSCGCTGHGALSSEEE 228


>gi|356535894|ref|XP_003536477.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 751

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           +Y R+TP Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K  
Sbjct: 56  RYHRHTPHQIQELEAFFKECPHPDEKQRLDLSKRLA----LENKQVKFWFQNRRTQMKTQ 111

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R E   L+  N KL A N L+ +
Sbjct: 112 LERHENIMLRQENDKLRAENSLMKD 136



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 87/416 (20%), Positives = 162/416 (38%), Gaps = 81/416 (19%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-----DCRSVEVVNVLPTGSSGT----IELLYM 270
           A R  G+V ++   + E L D   W         R++ + +V+  G  GT    +++++ 
Sbjct: 318 ATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINL-DVISNGMGGTRNGALQVMHA 376

Query: 271 QLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGY 330
           ++   + L P R    +R+     +G   V + S+   + G     A   +    LPSG 
Sbjct: 377 EVQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSI---EIGHDAANAQPVMSCRRLPSGC 433

Query: 331 LIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ------- 383
           +++    G S +  ++H + +   V ++ RPL  S         +A L+  RQ       
Sbjct: 434 IVQDMPNGYSKVTWLEHWEYDENVVHQLYRPLLSSGVGFGAHRWIATLQ--RQCECLAIL 491

Query: 384 ISQEVSQPSVTGW---GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
           +S  +S    T     GRR  ++  L+QR++  F   +   +   W           ++H
Sbjct: 492 MSSSISSDDHTALSQAGRR--SMLKLAQRMTSNFCSGVCASSARKWD----------SLH 539

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSS 498
           + +    M  +    V+  P     ++ + A+ +   V    L  FLR+   RSEW    
Sbjct: 540 IGTLGDDMKVMTRKNVDD-PGEPPGIVLSAATSVWVPVSRQRLFDFLRDERLRSEW---- 594

Query: 499 IDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMP 558
            D  S      GP             Q ++ +A    H   + +++   +      M++ 
Sbjct: 595 -DILS----NGGPM------------QEMVHIAKGQGHGNCVSLLRANAVNANDSSMLIL 637

Query: 559 SDIFLLQLCSGVDENAVGNCAELVFAPIDA-------SFSDDA--PIIPSGFRIIP 605
            + ++   CS V           V+AP+D        S  D A   ++PSGF I+P
Sbjct: 638 QETWMDASCSVV-----------VYAPVDVQSLNVVMSGGDSAYVALLPSGFAILP 682


>gi|242076842|ref|XP_002448357.1| hypothetical protein SORBIDRAFT_06g025750 [Sorghum bicolor]
 gi|241939540|gb|EES12685.1| hypothetical protein SORBIDRAFT_06g025750 [Sorghum bicolor]
          Length = 817

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 7/107 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+TP Q+  LE ++ E P P   +R +L ++      +EP+Q+K WFQNRR   K  
Sbjct: 105 RYNRHTPHQIARLEAMFKEFPHPDEKQRAELSKQL----GLEPRQVKFWFQNRRTNAKCL 160

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
              S L          N++  +EN RL+++  +L  EN   R+  ++
Sbjct: 161 TWLSLLHGPE---PGKNQMERQENARLKQENDKLRVENLSIREAMRD 204



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 172/430 (40%), Gaps = 94/430 (21%)

Query: 214 HGCTGVAARACGLVGLDPTR-VAEILKDRPSW-------YRDCRSVEVVNVLPTGS-SGT 264
           +G    A+R  G+V +D +  + E   D   W            ++E ++    GS +G 
Sbjct: 382 NGFVSEASRESGIVTVDSSAALVEAFMDERRWSDMFSCIVAKAATIEEISPGVAGSRNGA 441

Query: 265 IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAE 324
           + L+  +L   + L P R+   LR+   L + +  V + S++  Q    +       +  
Sbjct: 442 LLLMQAELQVLSPLVPIREVTFLRFCKQLAESAWAVVDVSIDGLQMDHCLATN---TKCR 498

Query: 325 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYES----------STLIAQKTT 374
            LPSG +++    G  +   V+H +    SV ++ +PL  S          +TL  Q   
Sbjct: 499 RLPSGCVLQDTPNGCKVTW-VEHAEYPEASVHQLYQPLLCSGLALGAGRWLATLQRQCEC 557

Query: 375 MAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI 434
           +A L     + +  S+ +V+  G+R  +L  L++R+   F   ++  +   WS+L  DG+
Sbjct: 558 LAILMSSLAVPEHDSE-AVSLEGKR--SLLKLARRMMENFCAGMSASSSCEWSIL--DGL 612

Query: 435 -----DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR- 488
                 DV V V +S  +            P +   V+ + A+ +   V P  L  FLR 
Sbjct: 613 TGSMGKDVRVMVQNSVDE------------PGVPPGVVLSVATAVWLPVTPERLFNFLRD 660

Query: 489 -EHRSEWADSSIDAYSAAAVKAGPCS--LPVPRAGNFGGQVILPLA-HTIEHEEFLEVIK 544
            E R+EW     D  S      GP    L + +    G  V L  A HT  H        
Sbjct: 661 EELRAEW-----DILS----NGGPMQQMLRITKGQLDGNSVTLLRADHTNSH-------- 703

Query: 545 LENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAP 595
                       + S + L + C+  D +     A +V+AP+D            S +  
Sbjct: 704 ------------LNSILILQETCT--DRSG----AMVVYAPVDFPAMQLVIGGGDSTNVA 745

Query: 596 IIPSGFRIIP 605
           ++PSGF I+P
Sbjct: 746 LLPSGFVILP 755


>gi|2388574|gb|AAB71455.1| Strong similarity to Phalaenopsis homeobox protein (gb|U34743)
           [Arabidopsis thaliana]
          Length = 749

 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 109/508 (21%), Positives = 193/508 (37%), Gaps = 107/508 (21%)

Query: 215 GCTGVAARACGLVGLDPTRVAEILKDRPSWYRD----CRSVEVVNVLPTGSSGT----IE 266
           G    A+R   +V ++   + EIL D   W             + VL TG +G     ++
Sbjct: 311 GYRSEASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQ 370

Query: 267 LLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEML 326
           ++  +   P+ L P R+ +  RY     DGS  V + SL++ Q     P  P   R    
Sbjct: 371 VMSAEFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQ-----PNPP--ARCRRR 423

Query: 327 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQI- 384
            SG LI+    G S +  V+H++++   V  + + +  +      K  +A L R   ++ 
Sbjct: 424 ASGCLIQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLA 483

Query: 385 --------------SQEVSQPSVTGW-------GRRPAALRALSQRLSRGFNEALNGFTD 423
                         S+  SQ  +  +       GRR  ++  L++R+   F   ++  T 
Sbjct: 484 SVMATNISSGEVGESESESQFYINEYAVITNQEGRR--SMLKLAERMVISFCAGVSASTA 541

Query: 424 EGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAIL 483
             W+ L   G +DV V    S               P     ++ + A+     VPP  +
Sbjct: 542 HTWTTLSGTGAEDVRVMTRKSVDD------------PGRPPGIVLSAATSFWIPVPPKRV 589

Query: 484 LRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLE 541
             FLR+   R+EW     D  S                    G V+  +AH     +   
Sbjct: 590 FDFLRDENSRNEW-----DILS-------------------NGGVVQEMAHIANGRDTGN 625

Query: 542 VIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGF 601
            + L   A+  +     S++ +LQ  S  D  A    + +++AP+D              
Sbjct: 626 CVSLLRSANSSQ-----SNMLILQE-SCTDPTA----SFVIYAPVD-------------- 661

Query: 602 RIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHL 661
            I+ ++   +   P+    L S   + P GN  SG      G   S++T+AFQ   +   
Sbjct: 662 -IVAMNIVLNGGDPDYVALLPSGFAILPDGNANSG---APGGDGGSLLTVAFQILVDSVP 717

Query: 662 QENVASMARQYVRGIIA-SVQRVALALS 688
              ++  +   V  +IA +V+R+  ++S
Sbjct: 718 TAKLSLGSVATVNNLIACTVERIKASMS 745



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 7/68 (10%)

Query: 38  LERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAV 94
           L R + ECP P   +R+QL RE     N+EP Q+K WFQN+R + K   +R E S L+A 
Sbjct: 95  LNRFFKECPHPDDKQRKQLSREL----NLEPLQVKFWFQNKRTQMKNHHERHENSHLRAE 150

Query: 95  NRKLTAMN 102
           N KL   N
Sbjct: 151 NEKLRNDN 158


>gi|326502292|dbj|BAJ95209.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326505580|dbj|BAJ95461.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 336

 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 72  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 127

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++  RL+A    L A +  L+++N RL+ QV  L 
Sbjct: 128 TLERDFDRLKASFDALRADHDALLQDNHRLRSQVVTLT 165


>gi|186504743|ref|NP_180796.2| homeobox-leucine zipper protein HDG3 [Arabidopsis thaliana]
 gi|187471166|sp|Q9ZV65.2|HDG3_ARATH RecName: Full=Homeobox-leucine zipper protein HDG3; AltName:
           Full=HD-ZIP protein HDG3; AltName: Full=Homeodomain
           GLABRA 2-like protein 3; AltName: Full=Homeodomain
           transcription factor HDG3; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 3; AltName: Full=Protein UPCURVED
           LEAF 1
 gi|151579839|gb|ABS18315.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|330253580|gb|AEC08674.1| homeobox-leucine zipper protein HDG3 [Arabidopsis thaliana]
          Length = 725

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 8/93 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           KY R+T  Q+  +E  + ECP P   +R  L  +      ++P QIK WFQN+R + K +
Sbjct: 71  KYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQL----GLDPVQIKFWFQNKRTQNKNQ 126

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ 118
           +E  R +  N +L  +N  L  EN RL++ + Q
Sbjct: 127 QE--RFE--NSELRNLNNHLRSENQRLREAIHQ 155



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 121/297 (40%), Gaps = 46/297 (15%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTGS-SGTIELLYMQ 271
           A+R   LV + PT + E+L     W           R+ E +     G+ +G ++++  +
Sbjct: 307 ASRETALVAMCPTGIVEMLMQENLWSTMFAGIVGRARTHEQIMADAAGNFNGNLQIMSAE 366

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
               + L   R+ + +RY     +G   V + S+++      +P     ++    PSG L
Sbjct: 367 YQVLSPLVTTRESYFVRYCKQQGEGLWAVVDISIDHL-----LPNIN--LKCRRRPSGCL 419

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVS- 389
           I+    G S +  V+H++++      +   L  +    A    +  L R   +IS  +S 
Sbjct: 420 IQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWVGTLVRQCERISSILST 479

Query: 390 ---------QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEG-WSMLESDGIDDVTV 439
                      ++T  G+   ++  +++R++R F   +   T    +S +E + I  +T+
Sbjct: 480 DFQSVDSGDHITLTNHGK--MSMLKIAERIARTFFAGMTNATGSTIFSGVEGEDIRVMTM 537

Query: 440 HVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEW 494
              + P K  GV              ++CA  S  L   PP  +  FLRE  HR  W
Sbjct: 538 KSVNDPGKPPGV--------------IICAATSFWL-PAPPNTVFDFLREATHRHNW 579


>gi|3831459|gb|AAC69941.1| putative homeodomain transcription factor [Arabidopsis thaliana]
          Length = 721

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 8/93 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           KY R+T  Q+  +E  + ECP P   +R  L  +      ++P QIK WFQN+R + K +
Sbjct: 71  KYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQL----GLDPVQIKFWFQNKRTQNKNQ 126

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ 118
           +E  R +  N +L  +N  L  EN RL++ + Q
Sbjct: 127 QE--RFE--NSELRNLNNHLRSENQRLREAIHQ 155



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 121/293 (41%), Gaps = 42/293 (14%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVVNVLPTGS-SGTIELLYMQ 271
           A+R   LV + PT + E+L     W           R+ E +     G+ +G ++++  +
Sbjct: 307 ASRETALVAMCPTGIVEMLMQENLWSTMFAGIVGRARTHEQIMADAAGNFNGNLQIMSAE 366

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
               + L   R+ + +RY     +G   V + S+++      +P     ++    PSG L
Sbjct: 367 YQVLSPLVTTRESYFVRYCKQQGEGLWAVVDISIDHL-----LPNIN--LKCRRRPSGCL 419

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVS- 389
           I+    G S +  V+H++++      +   L  +    A    +  L R   +IS  +S 
Sbjct: 420 IQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWVGTLVRQCERISSILST 479

Query: 390 -----QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEG-WSMLESDGIDDVTVHVNS 443
                  ++T  G+   ++  +++R++R F   +   T    +S +E + I  +T+   +
Sbjct: 480 DFQSVDSALTNHGK--MSMLKIAERIARTFFAGMTNATGSTIFSGVEGEDIRVMTMKSVN 537

Query: 444 SPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE--HRSEW 494
            P K  GV              ++CA  S  L   PP  +  FLRE  HR  W
Sbjct: 538 DPGKPPGV--------------IICAATSFWL-PAPPNTVFDFLREATHRHNW 575


>gi|357147780|ref|XP_003574482.1| PREDICTED: homeobox-leucine zipper protein HOX5-like [Brachypodium
           distachyon]
          Length = 276

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 76  KKRRLTAEQVQMLERSFGEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKNK 131

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++  RL+A    L A +  L+ +NDRL+ QV  L 
Sbjct: 132 QLEQDFDRLKAAYDALAADHHGLLSDNDRLRAQVISLT 169


>gi|125531139|gb|EAY77704.1| hypothetical protein OsI_32745 [Oryza sativa Indica Group]
          Length = 442

 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/37 (75%), Positives = 32/37 (86%)

Query: 19  KMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQ 55
           K  MD+GKYV+YTP+QVEALER+Y ECPKPS  RRQQ
Sbjct: 377 KAGMDSGKYVQYTPDQVEALERVYAECPKPSFSRRQQ 413


>gi|414883573|tpg|DAA59587.1| TPA: putative receptor-like kinase family protein, partial [Zea
           mays]
          Length = 52

 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/40 (80%), Positives = 35/40 (87%), Gaps = 2/40 (5%)

Query: 162 HPP-RDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPG 199
           HPP RDA+ PAGLL+IAEETL EF+SKATGTAV WVQM G
Sbjct: 13  HPPQRDANNPAGLLAIAEETLAEFMSKATGTAVNWVQMVG 52


>gi|413919222|gb|AFW59154.1| outer cell layer2 [Zea mays]
          Length = 863

 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 7/106 (6%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 86
           Y R+TP Q+E LE ++ E   P   +R QL R+      ++P+Q+K WFQNRR   K   
Sbjct: 140 YNRHTPRQIEQLEAMFKEFHHPDEKQRAQLSRQL----GLDPRQVKFWFQNRRTHLKCLT 195

Query: 87  EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
             S L          N+L  +EN RL+ +  +L  EN   R+  ++
Sbjct: 196 WLSLLHGPE---LGKNQLERQENARLKHENDKLRVENLSIREAIRD 238



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 109/456 (23%), Positives = 179/456 (39%), Gaps = 104/456 (22%)

Query: 224 CGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP--TGS-SGTIELLYMQLYAPTTLAP 280
           C L  L P R ++I      +    ++  V  +LP   GS +G + L+  +L   + L P
Sbjct: 450 CSLFLLLPRRWSDIF-----YCIVAKASIVEEILPGVAGSRNGALLLMQAELQMLSPLVP 504

Query: 281 ARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGS 340
            R+   LR+   L +G+  V + S++  Q    +       +   LPSG +++    G  
Sbjct: 505 IREVTFLRFCKQLAEGAWAVVDVSIDGLQTDQCLATN---TKCRRLPSGCVLQDTPNGCK 561

Query: 341 IIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH----LRQISQEVSQP----- 391
           +   V+H +    SV ++ +PL  S   +     +A L+     L  +   ++ P     
Sbjct: 562 VTW-VEHAEYPEASVHQLYQPLMRSGLALGAGRWLATLQRQCECLAILMSSLAAPEHDSA 620

Query: 392 SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGI-----DDVTVHVNSSPS 446
           +V+  G+   +L  L++R+   F   +   +   WSML  DG       DV V V +S  
Sbjct: 621 AVSLEGKW--SLLKLARRMMENFCAGMGASSSREWSML--DGFTGSTGKDVRVMVQNSVD 676

Query: 447 KMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR--EHRSEWADSSIDAYSA 504
           +            P +   V+ + A+ +   V P  L  FLR  E R+EW     D  S 
Sbjct: 677 E------------PGVPPGVVLSVATAVWLPVTPERLFNFLRDEELRAEW-----DILS- 718

Query: 505 AAVKAGPCS--LPVPRAGNFGGQVILPLA-HTIEHEEFLEVIKLENMAHYREDMIM--PS 559
                GP    L + +    G  V L  A HT  H   + +++ E        M++  P 
Sbjct: 719 ---NGGPMQQVLRISKGQLDGNSVALLRADHTDSHLNSILILQ-ETCTDRSGAMVVYTPV 774

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTL 619
           D   +QL  G  +                  S +  ++PSGF I+P  S           
Sbjct: 775 DFPAMQLVLGGGD------------------SKNVALLPSGFVILPAGS----------- 805

Query: 620 DLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQF 655
             AS L     G+KA G          S++T+AFQ 
Sbjct: 806 -TASGL-----GHKARG----------SLLTVAFQI 825


>gi|356529261|ref|XP_003533214.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 771

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+TP+Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K   
Sbjct: 80  YHRHTPQQIQELEAFFKECPHPDEKQRTDLSKRL----GLENKQVKFWFQNRRTQMKTQL 135

Query: 84  QRKEASRLQAVNRKLTAMNKLL 105
           +R E   L+  N KL A N ++
Sbjct: 136 ERHENMILRQENDKLRAENSVM 157



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 166/412 (40%), Gaps = 69/412 (16%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIELLYMQ 271
           A R  G+V      + E L D   W     S+      + VL +G     SG ++++  +
Sbjct: 343 ATRGTGVVPASSLGIVETLMDVDRWAEMFSSMIASAATLEVLSSGMGESRSGALQVMLAE 402

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           +   + L PAR    LRY+    +G   V + S++  +N   +  +   +    LPSG +
Sbjct: 403 VQLLSPLVPARSLSFLRYSKQHGEGVWAVVDVSVDIGRN---VTNSHPLMSCRRLPSGCV 459

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYES----------STLIAQKTTMAALRHL 381
           I+    G S I  V+H   +   V ++ RPL  S          +TL+ Q   +A L  +
Sbjct: 460 IQDMPNGFSKITWVEHSQYDESVVHQLYRPLVSSGIGFGAQRWIATLLRQCDCLAIL--M 517

Query: 382 RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV 441
            QI  E   P+V     +   L+ L+QR++  F   +   +   W +L    + D     
Sbjct: 518 SQIPSE--DPTVISLEGKKNMLK-LAQRMTEYFCSGICASSVRKWEILNIGNLAD----- 569

Query: 442 NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSI 499
                ++M  +++  +  P+ +  ++ + ++ +   V    +  FLR+   R EW     
Sbjct: 570 ---DMRIMARKINMDD--PTEAPGIVLSASTSVWMPVSRQRVFDFLRDENLRGEW----- 619

Query: 500 DAYSAAAVKAGPCS--LPVPRAGNFGGQV----ILPLAHTIEHEEFLEVIKLENMAHYRE 553
           D  S    K GP    L + +  + G  V    +  + H I   E   +   E+      
Sbjct: 620 DMLS----KDGPMKEMLHIAKGQDRGNCVSILHVSAIFHHILCNECNVLYLQESWTDASG 675

Query: 554 DMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
            +++ S I +  L      N V NC        D+SF     + PSGF I+P
Sbjct: 676 SLVVYSPINMQAL------NMVMNCG-------DSSF---VALRPSGFAILP 711


>gi|255563731|ref|XP_002522867.1| Homeobox protein FWA, putative [Ricinus communis]
 gi|223537951|gb|EEF39565.1| Homeobox protein FWA, putative [Ricinus communis]
          Length = 581

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 162/429 (37%), Gaps = 112/429 (26%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGS-----SGTIELLYM 270
           A+R  G +  + T + E L D   W      V     ++  L  GS       T++++  
Sbjct: 161 ASREMGFIHANATSIVECLMDLKQWSSAFSKVVSRATLLGFLSVGSMVGNYDETLQVIRA 220

Query: 271 QLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGY 330
           + + PT L P R+    RY   L   +  V + SL N    P        VR +  PSG 
Sbjct: 221 EFHVPTPLVPIRECQFARYCKRLNSNTWGVVDVSLENLFPYP-------IVRFQRRPSGC 273

Query: 331 LIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVS 389
           LI+    G S +  V+H++++      + +PL  S      K  +A+L +H  +I+  +S
Sbjct: 274 LIQELPNGYSKVTWVEHVEVDNIVGSTIFQPLVLSGFAFGAKRWIASLIQHFERIATLMS 333

Query: 390 -QP------SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVN 442
            +P      S+   G+R   L  L++R+   F   L+G T+  W      G +D      
Sbjct: 334 VEPIFMDGGSICQNGKR--NLIMLAERMMTKFVLDLSGSTNNLWMPFPVTGAEDF----- 386

Query: 443 SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSID 500
               +MM   +   +G+   S   +    S+ L   PP+ +  FLR    R++W      
Sbjct: 387 ----RMMTKSIGDNSGW---SITTIAFTYSLWLP-APPSRVFDFLRHEDCRNKWD----- 433

Query: 501 AYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSD 560
                                        L+H +E +E   +IK EN  +          
Sbjct: 434 ----------------------------LLSHELEVQELTHIIKGENQEN---------R 456

Query: 561 IFLLQLCSGVDENAVGNCAEL---------------VFAPID---------ASFSDDAPI 596
           I +L+  SG       +C E+               V+AP D            SDD  I
Sbjct: 457 ISVLRTMSG-----YSDCKEILYLQESYTDPFASYVVYAPFDFDSMATILKGGNSDDMNI 511

Query: 597 IPSGFRIIP 605
           +PSGF I P
Sbjct: 512 LPSGFVIHP 520


>gi|356561699|ref|XP_003549117.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 827

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+TP+Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K   
Sbjct: 144 YHRHTPQQIQELEAFFKECPHPDEKQRTDLSKRL----GLENKQVKFWFQNRRTQMKTQL 199

Query: 84  QRKEASRLQAVNRKLTAMNKLLME 107
           +R E   L+  N KL A N ++ +
Sbjct: 200 ERHENMILRQENDKLRAENSVMKD 223



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 164/410 (40%), Gaps = 75/410 (18%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT------IELLY 269
           A R  G+V      + EIL D   W     S+      V VL +G+ GT      + L  
Sbjct: 408 ATRGTGVVSASSLGLVEILMDADQWSEMFSSMIASAATVEVLSSGTGGTRSGALQVMLAE 467

Query: 270 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSG 329
           +QL +P  L PAR    LR+     +G   V + S++  +N   +  +   +    LPSG
Sbjct: 468 VQLLSP--LVPARQVSFLRFCKKHAEGLWAVVDVSVDIGRN---VTNSHPLMSCRRLPSG 522

Query: 330 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVS 389
            +I+    G S I  V+H   +   + ++ RPL  S      +  +A L  LRQ      
Sbjct: 523 CVIQDMPNGFSNITWVEHSQYDESVIHQLYRPLVSSGIGFGAQRWIATL--LRQCDCLAI 580

Query: 390 QPSVTGWGRRPAA------LRALSQRLSRGFNEALNGFTDEGWSMLESDGI-DDVTVHVN 442
             S  G    P A      +  L+QR++  F   +   +   W +L    + DD+ +   
Sbjct: 581 LRSPQGPSEDPTAQAGRTNMMKLAQRMTECFCSGICASSACKWDILHIGNLADDMRIMAR 640

Query: 443 S--SPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSS 498
               P++  G+              VL A  S+ +  V    +  FLR+   R EW    
Sbjct: 641 KIDDPTEAPGI--------------VLSASTSVWM-PVSRKRVFDFLRDENLRGEW---- 681

Query: 499 IDAYSAAAVKAGPCS--LPVPRAGNFGGQV-ILPLAHTIEHEEFLEVIKLENMAHYREDM 555
            D  S    K GP    L + +  + G  V IL  A++  +  +L+    E+ +     M
Sbjct: 682 -DLLS----KDGPMKEMLHIAKGQDRGNCVSILHSANSECNVLYLQ----ESWSDASGSM 732

Query: 556 IMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIP 605
           ++ S I +  L             ++V +  D+SF    P+ PSGF I+P
Sbjct: 733 VVYSPINMQAL-------------QMVMSCGDSSF---VPLRPSGFAILP 766


>gi|345193171|tpg|DAA34951.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 787

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 7/79 (8%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+TP Q+E LE ++ E   P   +R QL R+      ++P+Q+K WFQNRR   K   
Sbjct: 140 YNRHTPRQIEQLEAMFKEFHHPDEKQRAQLSRQL----GLDPRQVKFWFQNRRTHLKNQL 195

Query: 84  QRKEASRLQAVNRKLTAMN 102
           +R+E +RL+  N KL   N
Sbjct: 196 ERQENARLKHENDKLRVEN 214


>gi|449533164|ref|XP_004173547.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like, partial
           [Cucumis sativus]
          Length = 365

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           KY R+T EQ+  +E L+ E P P   +RQQL +       + P+Q+K WFQNRR + K  
Sbjct: 115 KYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRL----GLSPRQVKFWFQNRRTQIKAI 170

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R E + L+A   KL   NK + E
Sbjct: 171 QERHENTLLKAEMEKLREENKAMRE 195


>gi|297606515|ref|NP_001058601.2| Os06g0719900 [Oryza sativa Japonica Group]
 gi|255677401|dbj|BAF20515.2| Os06g0719900 [Oryza sativa Japonica Group]
          Length = 93

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/43 (67%), Positives = 32/43 (74%)

Query: 270 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGP 312
           +QLYAPTTLAPA DFWLLRYTS+L DGSLVV    +    N P
Sbjct: 30  LQLYAPTTLAPAHDFWLLRYTSILGDGSLVVSCLIMERKTNYP 72


>gi|60099377|dbj|BAD89978.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 339

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           KY R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K  
Sbjct: 102 KYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAI 157

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R E S L+A   KL   NK + E
Sbjct: 158 QERHENSLLKAELEKLREENKAMRE 182


>gi|449527811|ref|XP_004170903.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           GLABRA 2-like, partial [Cucumis sativus]
          Length = 416

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 79/371 (21%), Positives = 154/371 (41%), Gaps = 63/371 (16%)

Query: 261 SSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHF 320
           ++G ++L++ ++   T L P R+ + +R+   L+     + + S+ N ++          
Sbjct: 29  NNGAVQLMFAEVQMLTPLVPTREMYFIRHCKQLDAEQWAIVDVSIENVEDNNI---DVSL 85

Query: 321 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-- 378
           V+    PSG +I+    G   + +V+H++     V  + R +  + T    +  MA L  
Sbjct: 86  VKYRKRPSGCIIKDEPNGHCKVTMVEHLECVKNKVHNLYRSIVNNGTAFGARHWMATLQL 145

Query: 379 ---RHLRQISQEVSQPSVTG---WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESD 432
              R    ++  +     TG      R + L+ L+QR+S  F++A+   + + W+ +   
Sbjct: 146 QCERSAFFMATNIPMKDSTGVSTLAGRKSTLK-LAQRMSCSFSQAVAASSYQTWTKVVGK 204

Query: 433 GIDDVTVHVN---SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE 489
             +D+ V      S P + +GV              +LCA +S+ L  + P +L  F R+
Sbjct: 205 SGEDIRVCSRKNLSDPGEPIGV--------------ILCAVSSLWLP-LSPHLLFDFFRD 249

Query: 490 H--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLEN 547
              RS+W D+      A  +        + +  + G  V +    + E+      I  ++
Sbjct: 250 ESRRSQW-DAMFGGDKAKTIA------NLAKGQDRGNSVTIQTIGSKENNNNNMWILQDS 302

Query: 548 MAHYREDMIMPS--DIFLLQ-LCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRII 604
             +  E M++ S  D+  +Q + SG D  +V                    I+PSGF I+
Sbjct: 303 STNSSESMVVYSGVDVTSMQSVMSGCDSGSV-------------------TILPSGFXIL 343

Query: 605 PLDSGKDTPSP 615
           P   G D+  P
Sbjct: 344 P--DGADSRPP 352


>gi|60099371|dbj|BAD89976.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 397

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           KY R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K  
Sbjct: 102 KYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAI 157

Query: 84  -QRKEASRLQAVNRKLTAMNKLLME 107
            +R E S L+A   KL   NK + E
Sbjct: 158 QERHENSLLKAELEKLREENKAMRE 182


>gi|124359623|gb|ABN06007.1| Homeodomain-related [Medicago truncatula]
          Length = 365

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 143 YHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 198

Query: 84  QRKEASRLQAVNRKLTAMNKLLME 107
           +R E S L++   KL   NK L E
Sbjct: 199 ERHENSLLKSEIEKLREKNKTLRE 222


>gi|195638278|gb|ACG38607.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
          Length = 270

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 11/158 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 132

Query: 86  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTS 142
           +   +  RL+A    L A ++ L+ +ND L+ QV  +        ++T  +AT+A  +  
Sbjct: 133 QLETDYDRLKAAYNALAADHQGLLADNDSLRAQV--ICLTEKLQGKETSLSATIAAQEVD 190

Query: 143 CESVVTSGQHHLTPQQQHQ--HPPRDASPAGLLSIAEE 178
             +  T+G      QQ     H     +  G LS  EE
Sbjct: 191 QPNEHTTGTEKXLAQQLKDDLHSSCGCTGHGALSSEEE 228


>gi|226509342|ref|NP_001145713.1| uncharacterized protein LOC100279217 [Zea mays]
 gi|219884129|gb|ACL52439.1| unknown [Zea mays]
          Length = 672

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 94/426 (22%), Positives = 172/426 (40%), Gaps = 95/426 (22%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----I 265
           +G    A+R   +V +    + EIL D   +     S+      + VL TG +G     +
Sbjct: 237 YGFKSEASRDSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNGAL 296

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +++ ++   P+ L P RD + +RY     DG+  V + SL+ +            ++   
Sbjct: 297 QVMSVEFQVPSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDTSS----------VLKCRR 346

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQI 384
            PSG LI+    G S +  V+H++++  SV  + + L +S      +  +  L R   ++
Sbjct: 347 RPSGCLIQEMPNGYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERL 406

Query: 385 SQEVSQ--PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           +  ++   P+     +T    R + L+ L++R+   F   +       W+ L   G DDV
Sbjct: 407 ASVMASNIPTSDIGVITSTEGRKSMLK-LAERMVTSFCGGVTASAAHQWTTLSGSGADDV 465

Query: 438 TVHVNSS---PSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RS 492
            V    S   P +  G+              VL A  S  L  + P  +  FLR+   RS
Sbjct: 466 RVMTRKSVDDPGRPPGI--------------VLNAATSFWLP-ITPKRVFDFLRDESSRS 510

Query: 493 EWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTI---EHEEFLEVIKLENMA 549
           EW     D  S                    G V+  +AH     +H   + ++++    
Sbjct: 511 EW-----DILS-------------------NGGVVQEMAHIANGRDHGNCVSLLRVNQST 546

Query: 550 HYREDMIMPSDIFLLQ-LCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPS 599
           +  +     S++ +LQ  C+    +A G  + +++AP+D             D   ++PS
Sbjct: 547 NSTQ-----SNMLILQESCT----DASG--SYVIYAPVDVVAMNVVLNGGDPDYVALLPS 595

Query: 600 GFRIIP 605
           GF I+P
Sbjct: 596 GFAILP 601



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 38  LERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAV 94
           +E  + ECP P   +R++L RE  ++    P Q+K WFQN+R + K   +R+E S+L+A 
Sbjct: 1   MEAFFKECPHPDDKQRKELSRELGLV----PLQVKFWFQNKRTQMKNQHERQENSQLRAE 56

Query: 95  NRKLTAMN 102
           N KL A N
Sbjct: 57  NEKLRAEN 64


>gi|77378038|gb|ABA70760.1| baby boom interacting protein 2 [Brassica napus]
          Length = 697

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 17  GQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQ 76
           G K      +Y R+T +Q++ LE ++ EC  P   +R  L R+     N++P+Q+K WFQ
Sbjct: 6   GDKPPRKKKRYHRHTAKQIQDLESVFKECAHPDEKQRLDLSRKL----NLDPRQVKFWFQ 61

Query: 77  NRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
           NRR + K   +R E + L+  N KL A N  + E
Sbjct: 62  NRRTQMKTQIERHENALLRQENDKLRAENMSVRE 95



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 113/512 (22%), Positives = 203/512 (39%), Gaps = 103/512 (20%)

Query: 203 GPDSIGIVAISHGCTG-VAARACGLVG--LDPTRVAEILKDRPSWYRDCRSVEVVNVLPT 259
           GP   G V+ +   TG V   +  LV   +D  R AE+    PS      + E+++    
Sbjct: 257 GPKQDGFVSEASKETGNVIINSLALVETLMDSERWAEMF---PSMISRTSTTEIISSGMG 313

Query: 260 GS-SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAP 318
           G+ +G + L++ +L   + L P R    LR+     +G   V + S+++ + G S     
Sbjct: 314 GTRNGALHLMHAELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS--- 370

Query: 319 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL 378
                  LPSG L++    G S +  ++H + +   +  + RPL         +  MAAL
Sbjct: 371 ----CRRLPSGCLVQDMANGYSKVTWIEHTEYDETRIHRLYRPLLSCGLAFGAQRWMAAL 426

Query: 379 RH----LRQISQEVSQPS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSML 429
           +     L  +      PS     ++  GR+  ++  L++R++  F   +   + + WS L
Sbjct: 427 QRQCECLTILMSSTVSPSRSPTPISCNGRK--SMLKLAKRMTDNFCGGVCASSLQKWSKL 484

Query: 430 ESDGID-DVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR 488
               +D DV +    S           VN  P     ++   A+ +   V P  L  FL 
Sbjct: 485 NVGNVDEDVRIMTRKS-----------VND-PGEPPGIVLNAATSVWMPVSPKRLFDFLG 532

Query: 489 EH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLE 546
               RSEW     D  S      GP             Q +  +A   +H   + +++  
Sbjct: 533 NERLRSEW-----DILS----NGGPM------------QEMAHIAKGHDHSNSVSLLRAT 571

Query: 547 NMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-------ASFSDDA--PII 597
            +   +  M++  +  +         +AVG  A +V+AP+D        +  D A   ++
Sbjct: 572 AINANQSSMLILQETSI---------DAVG--AVVVYAPVDIPAMQAVMNGGDSAYVALL 620

Query: 598 PSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQC-GSTKSVITIAFQFA 656
           PSGF I+P        +P R+              + +G+ S  C     S++T+AFQ  
Sbjct: 621 PSGFAILP-------SAPQRS-------------EERNGNGSGGCMEEGGSLLTVAFQIL 660

Query: 657 FEMHLQENVASMARQYVRGIIA-SVQRVALAL 687
                   +   + + V  +I+ +VQ++  AL
Sbjct: 661 VNSLPTAKLTVESVETVNNLISCTVQKIKAAL 692


>gi|1208940|gb|AAC37514.1| homeodomain protein 1 [Helianthus annuus]
          Length = 682

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T +Q+  +E L+ E P P   +RQQL +       + P+Q+K WFQNRR + K   
Sbjct: 99  YHRHTADQIREMEALFKESPHPDEKQRQQLSKRL----GLHPRQVKFWFQNRRTQIKTIQ 154

Query: 84  QRKEASRLQAVNRKLTAMNKLLME 107
           +R E S L++   KL   NKLL E
Sbjct: 155 ERHENSLLKSELDKLGEENKLLRE 178



 Score = 42.4 bits (98), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 95/243 (39%), Gaps = 29/243 (11%)

Query: 263 GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVR 322
           G ++L++ +L   T L   R+ + +RY+  L      + + S++N +       A    R
Sbjct: 374 GAVQLMFAELQMLTPLVATREVYFVRYSKQLTAEKWAIVDVSIDNVEKNIDASLA----R 429

Query: 323 AEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL---- 378
               PSG +I     G   +  ++H + +      + R +  S      +  MA L    
Sbjct: 430 CRKRPSGCIIEDKSNGHCKVTWIEHWECQKSVSHSMFRAIINSGLAFGARNWMATLQQQC 489

Query: 379 -RHLRQISQEVSQPSVTGWGR---RPAALRALSQRLS-RGFNEALNGFTDEGWSMLESDG 433
            R +  ++  V      G G    R + L+ L+QR++ R    AL   +   W  + S  
Sbjct: 490 ERLVFFLATNVPTKDSCGIGTLAGRKSILK-LAQRMNVRVLVRALGASSYHTWKKIPSKT 548

Query: 434 IDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--R 491
             D+     +            +N        +LCA +S+ L  V   +L  FLR+   R
Sbjct: 549 GYDIRASRKN------------LNDAGEPLGVILCAVSSIWLP-VSHTLLFDFLRDETRR 595

Query: 492 SEW 494
           +EW
Sbjct: 596 NEW 598


>gi|46242599|gb|AAS83417.1| Hox16 [Oryza sativa Japonica Group]
          Length = 353

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 32  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 87

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
              ++  RL+A    L A +  L+++N RL  QV  L
Sbjct: 88  QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSL 124


>gi|45593096|gb|AAS68137.1| homeodomain leucine zipper protein 16 [Oryza sativa Japonica Group]
          Length = 353

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 32  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 87

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
              ++  RL+A    L A +  L+++N RL  QV  L
Sbjct: 88  QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSL 124


>gi|7269403|emb|CAB81363.1| putative homeodomain-protein [Arabidopsis thaliana]
          Length = 689

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 158/408 (38%), Gaps = 66/408 (16%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 83
           R T  Q + LE+ Y E P P+  +R +L +      N+   Q+K WFQN+R  EK     
Sbjct: 45  RRTAYQTQELEKFYMENPHPTEEQRYELGQRL----NMGVNQVKNWFQNKRNLEKVNNDH 100

Query: 84  -----QRKEASRLQAVNRKL-------------TAMN--------KLLMEENDRLQKQVS 117
                 R+E  RL A   +L              A N        + LM EN  L++++ 
Sbjct: 101 LENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENANLEREID 160

Query: 118 QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPR--DASPAGLLSI 175
           Q  + + +     Q    + +T     S  ++   + TP        R  +   +  L++
Sbjct: 161 Q--FNSRYLSHPKQR---MVSTSEQAPSSSSNPGINATPVLDFSGGTRTSEKETSIFLNL 215

Query: 176 AEETLTEFLSKATGTAVEWVQMPGMKPGP---------DSIGIVAISHGCTGVAARACGL 226
           A   L E ++        W+  P ++             S   V    G    A+RA GL
Sbjct: 216 AITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVTKPPGQIVEASRAKGL 275

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTL 278
           V +    + + L D   W      +  V     VL TGS    SG+++ +  +    + L
Sbjct: 276 VPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQVQAEFQVISPL 335

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
            P R    +RY   +  G  VV +  +  TQN   +P    +  ++ LPSG +I     G
Sbjct: 336 VPKRKVTFIRYCKEIRQGLWVVVD--VTPTQNPTLLP----YGCSKRLPSGLIIDDLSNG 389

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQIS 385
            S +  ++  +     + ++ +PL      +  K  +A L RH   +S
Sbjct: 390 YSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLS 437


>gi|302398865|gb|ADL36727.1| HD domain class transcription factor [Malus x domestica]
          Length = 393

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 110/261 (42%), Gaps = 25/261 (9%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----I 265
           +G    A+R  G V ++   + E L D   W      V       +V+ +G  GT    +
Sbjct: 116 NGFVSEASRESGTVIINSLTLVETLMDSNRWLEMFPGVLARTSTTDVISSGMGGTRNGAL 175

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +L++ +L   + L P R+   LR+     +G   V + S++  ++   +P    F+    
Sbjct: 176 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDAIRDTTGVPT---FMNCRR 232

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH----- 380
           LPSG +++    G S +  V+H + +   V  + RPL  S      +  +A L+      
Sbjct: 233 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHHLYRPLLSSGMGFGAQRWVATLQRQSECQ 292

Query: 381 ---LRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID-D 436
              +          ++T  GRR  ++  L+QR++  F   +   T   W+ L +  +D D
Sbjct: 293 AILMSSCVTSRDHTAITASGRR--SMLKLAQRMTDNFCAGVCASTVHKWTKLNAGNVDED 350

Query: 437 VTVHVNSS---PSKMMGVQLS 454
           V V    S   P +  GV LS
Sbjct: 351 VRVMTRESLDDPGEPPGVVLS 371


>gi|15148918|gb|AAK84886.1|AF402605_1 homeodomain leucine zipper protein HDZ2 [Phaseolus vulgaris]
          Length = 327

 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 7/119 (5%)

Query: 25  GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
           GK  R T EQV+ LER +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 85  GKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKEL----GLQPRQVAIWFQNRRARFKT 140

Query: 85  R---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTD 140
           +   K+   L+A   +L    + L++END+L+ +V+ L  +     ++ +N+   ++ D
Sbjct: 141 KQLEKDYGTLKASYDRLKGDYESLLQENDKLKAEVNSLESKLILRDKEKENSDDKSSPD 199


>gi|356532433|ref|XP_003534777.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 675

 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 7/106 (6%)

Query: 5   SSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILS 64
           ++GGS D + +           Y R+  +Q   LE L+ +CP P  + R+Q+ ++     
Sbjct: 7   AAGGSGDDQHNQSLNKGKKTTTYRRHKEDQRTRLEELFRKCPNPDEIERRQIAKDL---- 62

Query: 65  NIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 107
            +EPKQ+K WFQN+R ++K   +R + + L+  N ++   N +L E
Sbjct: 63  GLEPKQVKFWFQNKRTQKKTISERVDNNVLRVENERMHNENLVLRE 108



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 14/140 (10%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSW----YRDCRSVEVVNVLPTGS----SGTIELLYMQ 271
           +++   +V +    + ++L +   W     R       + VL  GS    SG + L+  +
Sbjct: 285 SSKDSRIVRIKAKELVDMLLNSEIWENLFSRIVTKARTIQVLENGSLENRSGVLLLMREE 344

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           ++  + L P+R+F+ LRY   +E    V+ + S++  +     P    F      PSG +
Sbjct: 345 MHVLSPLVPSREFYFLRYCHQVEANVWVIADVSVDCMKENNHDPNCWRF------PSGCM 398

Query: 332 IRPCEGGGSIIHIVDHMDLE 351
           I+    G   +  V+H++++
Sbjct: 399 IQGISNGMCQVSWVEHVEVD 418


>gi|7446302|pir||T05794 homeotic protein homolog M7J2.100 - Arabidopsis thaliana
 gi|2980797|emb|CAA18173.1| putative homeodomain-protein [Arabidopsis thaliana]
          Length = 690

 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 157/408 (38%), Gaps = 66/408 (16%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK----- 83
           R T  Q + LE  Y E P P+  +R +L +      N+   Q+K WFQN+R  EK     
Sbjct: 46  RRTAYQTQELENFYMENPHPTEEQRYELGQRL----NMGVNQVKNWFQNKRNLEKINNDH 101

Query: 84  -----QRKEASRLQAVNRKL-------------TAMN--------KLLMEENDRLQKQVS 117
                 R+E  RL A   +L              A N        + LM EN  L++++ 
Sbjct: 102 LENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENANLEREID 161

Query: 118 QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPR--DASPAGLLSI 175
           Q  + + +     Q    + +T     S  ++   + TP        R  +   +  L++
Sbjct: 162 Q--FNSRYLSHPKQR---MVSTSEQAPSSSSNPGINATPVLDFSGGTRTSEKETSIFLNL 216

Query: 176 AEETLTEFLSKATGTAVEWVQMPGMKPGP---------DSIGIVAISHGCTGVAARACGL 226
           A   L E ++        W+  P ++             S   V    G    A+RA GL
Sbjct: 217 AITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVTKPPGQIVEASRAKGL 276

Query: 227 VGLDPTRVAEILKDRPSWYRDCRSVEVV----NVLPTGS----SGTIELLYMQLYAPTTL 278
           V +    + + L D   W      +  V     VL TGS    SG+++ +  +    + L
Sbjct: 277 VPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPL 336

Query: 279 APARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
            P R    +RY   +  G  VV +  +  TQN   +P    +  ++ LPSG +I     G
Sbjct: 337 VPKRKVTFIRYCKEIRQGLWVVVD--VTPTQNPTLLP----YGCSKRLPSGLIIDDLSNG 390

Query: 339 GSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQIS 385
            S +  ++  +     + ++ +PL      +  K  +A L RH   +S
Sbjct: 391 YSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLS 438


>gi|6714433|gb|AAF26121.1|AC012328_24 hypothetical protein [Arabidopsis thaliana]
          Length = 695

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 140/685 (20%), Positives = 256/685 (37%), Gaps = 156/685 (22%)

Query: 40  RLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR---LQAVNR 96
           + + ECP P   +R QL RE      +EP QIK WFQN+R + K +++ S    L+  N 
Sbjct: 38  KTFIECPHPDERQRNQLCREL----KLEPDQIKFWFQNKRTQSKTQEDRSTNVLLRGENE 93

Query: 97  KLTAMNKLLM-------------------EENDRLQKQVSQLVYENTFFRQQTQNAATLA 137
            L + N+ ++                   E    LQK    L +EN   +      +   
Sbjct: 94  TLQSDNEAMLDALKSVLCPACGGPPFGREERGHNLQK----LRFENARLKDHRDRISNFV 149

Query: 138 TTDTSCESVVTSGQHHLTPQQQHQH---------PPRDASPAGLLSIAEETLTE----FL 184
                 E  V     ++    +  +         P     P     I    L E     L
Sbjct: 150 DQHKPNEPTVEDSLAYVPSLDRISYGINGGNMYEPSSSYGPPNFQIIQPRPLAETDMSLL 209

Query: 185 SKATGTAVE------------WVQMPGMKPGPDSIGIV----------AISHGCTGVA-- 220
           S+   +AVE            WV     K   D   ++          A+ H  +  A  
Sbjct: 210 SEIAASAVEELKRLFLAEEQFWV-----KSCIDETYVIDTESYERFSHAVKHFSSTTAHV 264

Query: 221 --ARACGLVGLDPTRVAEILKDRPSWYR----DCRSVEVVNVLPTG-----SSGTIELLY 269
             ++A  +V ++   + ++  D   W             ++VL +G     +   +++++
Sbjct: 265 ESSKAVTVVHVEAINLIQMFLDPEKWKELFPTIVNKANTIHVLGSGLPIRGNCNVLQVMW 324

Query: 270 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSG 329
            QL+  + L PAR+F ++R    +E G  ++ + S    +       A  + R    PSG
Sbjct: 325 EQLHILSPLVPAREFMVVRCCQEIEKGIWIIADVS---HRANFDFGNAACYKR----PSG 377

Query: 330 YLIRPCEGGGSIIHIVDHMDLE-PWSVPEVLRPL------YESSTLIAQKTTMAALRHLR 382
            LI+      S +  ++H++++      ++ R L      Y +   I     M     L 
Sbjct: 378 CLIQALPDAHSKVMWIEHVEVDHKLDTHKIYRDLLSGGSGYGAKRWIVTLERMCERMALS 437

Query: 383 QIS----QEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVT 438
            I      + S+   TG  RR  ++  L +R+ + FNE L       +     +G+  V+
Sbjct: 438 SIQTLPPSDRSEVITTGEARR--SVMKLGERMVKNFNEMLTMSGKIDFPQQSKNGV-RVS 494

Query: 439 VHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLR--EHRSEWAD 496
           + +N    +  G+              V+ A +S+ +  + P  +  FL+  + R +W  
Sbjct: 495 IRMNIEAGQPPGI--------------VVSASSSLAIP-LTPLQVFAFLQNLDTRQQW-- 537

Query: 497 SSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMI 556
              D  S   V      +    +      ++ P      HEE  + + +++    ++DM+
Sbjct: 538 ---DILSYGTVVNEIARIVTGSSETNCVTILRP-----THEENNDKMVVQDSC--KDDML 587

Query: 557 MPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDA----------PIIPSGFRIIPL 606
           M  D ++         +A+G    +V+AP+D +    A          PI+PSGF +I  
Sbjct: 588 MLQDCYM---------DALGGM--IVYAPMDMATMHFAVSGEVDPSHIPILPSGF-VISS 635

Query: 607 DSGKDTPSPNRTLDLASALEVGPTG 631
           D  + T     TL L  A ++  +G
Sbjct: 636 DGRRSTVEDGGTL-LTVAFQILVSG 659


>gi|357452777|ref|XP_003596665.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355485713|gb|AES66916.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 554

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 106/497 (21%), Positives = 190/497 (38%), Gaps = 110/497 (22%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----IELLYMQ 271
            +R   L+ + PT++ E+L D   W     ++    E++     G  G+    + ++  +
Sbjct: 112 GSRDMALIKISPTKLVEVLMDLNQWCTAFHNIVSRAEIIGFFTDGVDGSYNEKMHVMSAE 171

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
            Y P+   P R+    RY+         V + SL +    PS     H       PSG L
Sbjct: 172 FYLPSPFIPTRECVFARYSKQFTHNIWAVVDVSLEDIL--PSFSNNFH-----KRPSGCL 224

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQP 391
           I     G S +  V+H+  +   +  + +    S         +A++    + S+ ++  
Sbjct: 225 IIGMPNGNSKVIWVEHVVADHSQLNGLFKTFVTSGLAFGAPRWLASIVQHIEWSETLNAT 284

Query: 392 SVTGWGR-------RPAALRALSQRLSRGFNEALNGFTDEGWSMLE--SDGIDDVTVHVN 442
            +    R       R + L+ L++R+ R F   L+  T+  W  L+    G +D+ V   
Sbjct: 285 KLIADARVLIPQIGRTSLLK-LAERMRRRFCANLSSTTNNPWMRLDPVPAGSEDIRV--- 340

Query: 443 SSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSID 500
                M+G      N    +++ V C   + L  +V P  L  FLR    RS+W   S  
Sbjct: 341 -----MIG------NNMAGIASLVFC---TTLWLNVSPNRLFNFLRHEKSRSKWDKLS-- 384

Query: 501 AYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSD 560
                A++   C L      N   +V L  A T E +                     ++
Sbjct: 385 --ENLAIQEFACMLTGKHPEN---RVSLLSASTSEDK---------------------TE 418

Query: 561 IFLLQLCSGVDENAVGNCAELVFAPID----------ASFSDDAPIIPSGFRIIPLDSGK 610
           IF LQ     +  A    + +++AP+D          +S  D+    PSGF IIP    +
Sbjct: 419 IFYLQ-----ESYADITASYVIYAPLDEPALTSLATGSSNPDNVVAYPSGFAIIPGGLPR 473

Query: 611 DTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMAR 670
           D                   G+K  G++++   + +S++T++F     +    NVAS+A 
Sbjct: 474 D-------------------GDKGKGNANS-TANNESLLTMSFHI---IDNASNVASIAP 510

Query: 671 QYVRGIIASVQRVALAL 687
           + V+ I   +     A+
Sbjct: 511 ESVQTIYNIITETVAAI 527


>gi|75106330|sp|Q5JMF3.1|ROC9_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC9; AltName:
           Full=GLABRA 2-like homeobox protein 9; AltName:
           Full=HD-ZIP protein ROC9; AltName: Full=Homeodomain
           transcription factor ROC9; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 9
 gi|57900354|dbj|BAD87344.1| putative homeodomain protein [Oryza sativa Japonica Group]
          Length = 816

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 131/366 (35%), Gaps = 66/366 (18%)

Query: 172 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIG------IVAISHGCTG------- 218
           +L +A   L E +   +     WV+  G++ G D +       +    HG +G       
Sbjct: 309 ILELATRALDELVGMCSSGEPVWVR--GVETGRDILNYDEYVRLFRRDHGGSGDQMAGWT 366

Query: 219 -VAARACGLVGLDPTRVAEILKDRPSW-------YRDCRSVEVV-NVLPTGSSGTIELLY 269
             A+R CGLV LD   +     D   W            ++E++ N    G  G ++L+Y
Sbjct: 367 VEASRECGLVYLDTMHLVHTFMDVDKWKDLFPTMISKAATLEMISNREDDGRDGVLQLMY 426

Query: 270 MQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSG 329
            +L   T + P R+ +  RY   L      + + S + ++ G     A   VR    PSG
Sbjct: 427 AELQTLTPMVPTRELYFARYCKKLAAERWAIVDVSFDESETG---VHASSAVRCWKNPSG 483

Query: 330 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLRQI 384
            LI     G   +  V+H      +V  + R +  S      +  +AAL     R +  +
Sbjct: 484 CLIEEQNNGRCKMTWVEHTRCRRCTVAPLYRAVTASGVAFGARRWVAALQLQCERMVFAV 543

Query: 385 SQEVSQPSVTG----WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
           +  V     TG     GRR  ++  L+ R++        G  D  W              
Sbjct: 544 ATNVPTRDSTGVSTLAGRR--SVLKLAHRMTSSLCRTTGGSCDMAW-------------- 587

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNA----------VLCAKASMLLQDVPPAILLRFLREH 490
              +P    G          S  NA          + CA AS  L  V P  LL  LR+ 
Sbjct: 588 -RRAPKGGSGGGGDDDIWLTSRENAGDDPGEPQGLIACAAASTWLP-VNPTALLDLLRDE 645

Query: 491 --RSEW 494
             R EW
Sbjct: 646 SRRPEW 651



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 83
           Y R+T EQ+  +E L+ E P P   +RQQ+ ++      +  +Q+K WFQNRR + K   
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQVSKQL----GLSARQVKFWFQNRRTQIKAVQ 154

Query: 84  QRKEASRLQAVNRKLTAMNKLLME 107
           +R E S L++   KL   ++ + E
Sbjct: 155 ERHENSLLKSELEKLQDEHRAMRE 178


>gi|449451247|ref|XP_004143373.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Cucumis sativus]
 gi|449482562|ref|XP_004156324.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Cucumis sativus]
          Length = 165

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 12/127 (9%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           +D+ K  R + +Q+EALER + E  K    R+ +L +E      ++P+QI VWFQNRR R
Sbjct: 6   VDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKEL----GLQPRQIAVWFQNRRAR 61

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ-TQNAATLATTD 140
            K ++       + ++   ++K    E   LQ++V +L    +  R+Q T+N  ++A TD
Sbjct: 62  WKTKQLEHLYDTLKQQFDTISK----EKHNLQQEVMKL---RSMLREQTTRNQGSMAHTD 114

Query: 141 TSCESVV 147
            S E   
Sbjct: 115 VSGEETT 121


>gi|8778268|gb|AAF79277.1|AC023279_26 F12K21.1 [Arabidopsis thaliana]
          Length = 164

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           +D+     ++  QV+ LE  +HECP P   +R+QL  E     N++ KQIK WFQNRR +
Sbjct: 15  IDSNNRRHHSNHQVQRLEAFFHECPHPDDSQRRQLGNEL----NLKHKQIKFWFQNRRTQ 70

Query: 82  EKQRKEAS---RLQAVNRKLTAMNKLL 105
            +   E +    L+  N K+  +N+ +
Sbjct: 71  ARIHNEKADNIALRVENMKIRCVNEAM 97


>gi|413922241|gb|AFW62173.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 154

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 63  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 118

Query: 86  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQV 116
           +   +  RL+A    L A ++ L+ +ND L+ QV
Sbjct: 119 QLETDYDRLKAAYDALAADHQGLLADNDNLRAQV 152


>gi|326531178|dbj|BAK04940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 101/445 (22%), Positives = 175/445 (39%), Gaps = 99/445 (22%)

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPT-RVAEILKDRPSWYRDCRSV------ 251
           GMKP            G    A+R  GLV +D +  + E L D   W  D  S       
Sbjct: 12  GMKPA-----------GFVSEASRESGLVIIDNSLALVETLMDERRW-SDMFSCMIAKAT 59

Query: 252 ---EVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLN-- 306
              EV N +    +G + L+  +L   + L P R+   LR+   L +G+  V + S++  
Sbjct: 60  ILEEVSNGIGGTRNGALLLMKAELQVLSPLVPIREVIFLRFCKQLAEGAWAVVDVSIDGL 119

Query: 307 -NTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYES 365
            + QN  +     +  +   LPSG +++    G   +  V+H + +  SV +  RPL  S
Sbjct: 120 LSNQNSATTSAGANL-KCRRLPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQFYRPLLRS 178

Query: 366 STLIAQKTTMAAL-RHLRQISQEVS--------QPSVTGWGRRPAALRALSQRLSRGFNE 416
                    +A L R    ++  +S        Q +++  GRR  ++  L++R++  F  
Sbjct: 179 GLAFGASRWLATLQRQCECLAILMSSATASPNEQTAISQEGRR--SMLKLARRMTENFCA 236

Query: 417 ALNGFTDEGWSMLESDGI-----DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKA 471
            ++  +   WS L  DG      +DV V    S S+            P     V+ + A
Sbjct: 237 GVSASSAREWSKL--DGATGSIGEDVRVMARKSVSE------------PGEPPGVVLSAA 282

Query: 472 SMLLQDVPPAILLRFLREH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILP 529
           + +   + P  L  FLR+   R+EW     D  S      GP             Q +  
Sbjct: 283 TSVWVPIAPEKLFDFLRDEQLRAEW-----DILS----NGGPM------------QEMAR 321

Query: 530 LAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID-- 587
           +A   ++   + +++   M+  +  M++     L + C+    + V      V+AP+D  
Sbjct: 322 IAKGHQNGNSVSLLRASAMSANQSSMLI-----LQETCTDASGSIV------VYAPVDIP 370

Query: 588 -------ASFSDDAPIIPSGFRIIP 605
                     S    ++PSGF I+P
Sbjct: 371 AMQLVMNGGDSTYVALLPSGFAILP 395


>gi|222636242|gb|EEE66374.1| hypothetical protein OsJ_22692 [Oryza sativa Japonica Group]
          Length = 91

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 649 ITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEA- 707
           +TIAFQFAFE HLQ +V +MA+QY+  II+SVQR+A+ LS SR         PPG   A 
Sbjct: 1   MTIAFQFAFESHLQGSVPAMAQQYMCSIISSVQRIAVVLSSSRLV-------PPGVAAAT 53

Query: 708 -HTLARWIC 715
            H  A   C
Sbjct: 54  QHAPATRCC 62


>gi|312283063|dbj|BAJ34397.1| unnamed protein product [Thellungiella halophila]
          Length = 295

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 16/156 (10%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M  +  G  D  D G Q       K  R   EQV+ LE+ +    K    R+ QL R   
Sbjct: 65  MGNNMNGEEDYSDDGSQM----GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL- 119

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQ 118
               ++P+QI +WFQNRR R K ++       + R+  A+   N LL   N +LQ ++  
Sbjct: 120 ---GLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDALKAENDLLQTHNQKLQAEIMG 176

Query: 119 LVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHL 154
           L       R+QT++      T+ SC +   +   +L
Sbjct: 177 LKN-----REQTESINLNKETEGSCSNRSDNSSDNL 207


>gi|255575467|ref|XP_002528635.1| homeobox protein, putative [Ricinus communis]
 gi|223531924|gb|EEF33738.1| homeobox protein, putative [Ricinus communis]
          Length = 223

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 13/126 (10%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +Q+E+LER + E  K    R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 61  KKKRLTSDQLESLERSFQEEIKLDPDRKMKLSREL----GLQPRQIAVWFQNRRARWK-- 114

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ--TQNAATLATTDTSC 143
             A +L+ +   L     ++ +E   LQ++V +L       RQ+  T+N  +   T+ S 
Sbjct: 115 --AKQLERLYDSLKEEFDVVSKEKQNLQEEVMKL---KAILRQEKATRNQVSTGYTEISG 169

Query: 144 ESVVTS 149
           E  V S
Sbjct: 170 EETVES 175


>gi|345566896|gb|EGX49835.1| hypothetical protein AOL_s00076g633 [Arthrobotrys oligospora ATCC
           24927]
          Length = 615

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 4/55 (7%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 87
           EQ  ALERLY +CPKP+   ++ L        N+ P ++ +WFQNRR R K+ KE
Sbjct: 87  EQTLALERLYQQCPKPNQATKRDLAHAI----NLSPTRVNIWFQNRRHRAKKHKE 137


>gi|302761652|ref|XP_002964248.1| hypothetical protein SELMODRAFT_81609 [Selaginella moellendorffii]
 gi|302815769|ref|XP_002989565.1| hypothetical protein SELMODRAFT_129907 [Selaginella moellendorffii]
 gi|300142743|gb|EFJ09441.1| hypothetical protein SELMODRAFT_129907 [Selaginella moellendorffii]
 gi|300167977|gb|EFJ34581.1| hypothetical protein SELMODRAFT_81609 [Selaginella moellendorffii]
          Length = 127

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 9/114 (7%)

Query: 11  DSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQ 70
           D     GQ+  ++  +  R + +QV++LER + +  K    R+ QL +E     +++P+Q
Sbjct: 12  DDDPGAGQQHHIEKKR--RLSVDQVKSLERHFEQDNKLEPERKLQLAKEL----SLQPRQ 65

Query: 71  IKVWFQNRRCREKQRKEASRLQAVNRKLTAMN---KLLMEENDRLQKQVSQLVY 121
           + VWFQNRR R K ++      A+   L A+    K L++E   L+ +V Q+ +
Sbjct: 66  VAVWFQNRRARWKTKQLEKDYDALKENLDALRGDYKSLLKEKQELEAEVCQIFF 119


>gi|3047106|gb|AAC13617.1| Arabidopsis thaliana homeodomain protein AHDP (SP:P93041)
           [Arabidopsis thaliana]
 gi|7267412|emb|CAB80882.1| homeodomain protein AHDP [Arabidopsis thaliana]
          Length = 590

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 121/296 (40%), Gaps = 42/296 (14%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR----DCRSVEVVNVLPTGSSGTI----ELLYMQ 271
           A+R  G+V ++   + E L D   W      +       +V+  G +GTI    +L+  +
Sbjct: 164 ASRTSGMVIINSLALVETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAE 223

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           L   + L P R+   LR+     +G   V + S++  +       AP   R   LPSG +
Sbjct: 224 LQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSG--GAPVIRR---LPSGCV 278

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQ-------I 384
           ++    G S +  V+H + +   + ++ RPL  S      +  +A L+  RQ       I
Sbjct: 279 VQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQ--RQCECLAILI 336

Query: 385 SQEVS---QPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGID-DVTVH 440
           S  V+     S+T  GR+  ++  L+QR++  F   ++  +   WS L    +D DV V 
Sbjct: 337 SSSVTSHDNTSITPGGRK--SMLKLAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRVM 394

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
              S               P     ++ + A+ +     P  L  FLR    R EW
Sbjct: 395 TRKSVDD------------PGEPPGIVLSAATSVWLPAAPQRLYDFLRNERMRCEW 438


>gi|449440459|ref|XP_004138002.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Cucumis sativus]
          Length = 240

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 13/126 (10%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R + EQ+E+LER + E  K    R+Q+L +E      ++P+QI VWFQNRR R K +
Sbjct: 66  KKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKEL----GLQPRQIAVWFQNRRARWKAK 121

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFR--QQTQNAATLATTDTSC 143
           +       + ++  A+++    E  +LQ++V +L    +  R  Q  +N  +   TD S 
Sbjct: 122 QLEHLYDTLKQEFDAISR----EKHKLQEEVMKL---KSMLRELQAARNQVSTVYTDLSG 174

Query: 144 ESVVTS 149
           E  V S
Sbjct: 175 EETVES 180


>gi|414585329|tpg|DAA35900.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 683

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 30/265 (11%)

Query: 214 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGT----I 265
           +G    A+R   +V +    + EIL D   +     S+      + VL TG +G     +
Sbjct: 213 YGFKSEASRDSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNGAL 272

Query: 266 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 325
           +++ ++   P+ L P RD + +RY     DG+  V + SL+ +            ++   
Sbjct: 273 QVMSVEFQVPSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDTSS----------VLKCRR 322

Query: 326 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQI 384
            PSG LI+    G S +  V+H++++  SV  + + L +S      +  +  L R   ++
Sbjct: 323 RPSGCLIQEMPNGYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERL 382

Query: 385 SQEVSQ--PS-----VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDV 437
           +  ++   P+     +T    R + L+ L++R+   F   +       W+ L   G DDV
Sbjct: 383 ASVMASNIPTSDIGVITSTEGRKSMLK-LAERMVTSFCGGVTASAAHQWTTLSGSGADDV 441

Query: 438 TVHVNSS---PSKMMGVQLSYVNGF 459
            V    S   P +  G+ L+    F
Sbjct: 442 RVMTRKSVDDPGRPPGIVLNAATSF 466


>gi|356498166|ref|XP_003517924.1| PREDICTED: uncharacterized protein LOC100783970 [Glycine max]
          Length = 345

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 7/98 (7%)

Query: 25  GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
           GK  R T EQV+ LER +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 85  GKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKEL----GLQPRQVAIWFQNRRARFKT 140

Query: 85  R---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           +   K+   L+A   +L    + L++END+L+ +V+ L
Sbjct: 141 KQLEKDYGVLKASYDRLKGDYESLVQENDKLKAEVNSL 178


>gi|356558073|ref|XP_003547333.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 713

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 26/136 (19%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 86
           Y R T  Q   LER   +CP P   +R+QL  E      +E KQ+K WFQN+R + K + 
Sbjct: 27  YKRLTSAQTARLERFIKDCPHPDEAQRRQLASEI----GLETKQVKFWFQNKRTQIKNQH 82

Query: 87  EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESV 146
           E            A N  L  ENDR+  +       N   ++  +N    +     C+  
Sbjct: 83  E-----------RADNTALRVENDRIHSK-------NLLMKKALKNMLCPSCGGAPCQ-- 122

Query: 147 VTSGQHHLTPQQQHQH 162
               + HL  + QH++
Sbjct: 123 --DDREHLMQKMQHEN 136



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 69/140 (49%), Gaps = 14/140 (10%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR-------DCRSVEVV-NVLPTGSSGTIELLYMQ 271
           A +  G+V ++  ++ ++  D   W           ++++V+ N L    SG ++L++ Q
Sbjct: 282 ATKDSGIVSINSIQLVDMFLDSDKWINLFPTIVTKAKTIKVLENGLVGSRSGALQLMFEQ 341

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           ++  + L   R+F  LRY   +E+G  V+ + S +      S  Q   F  +   PSG +
Sbjct: 342 MHVLSPLVQPREFQFLRYCEQIEEGVWVIADVSFD------SFRQKTSFFHSWRHPSGCM 395

Query: 332 IRPCEGGGSIIHIVDHMDLE 351
           I+    G S++  V+H++++
Sbjct: 396 IQEMPNGCSMVTWVEHVEVD 415


>gi|15218724|ref|NP_174724.1| homeobox-leucine zipper protein HDG10 [Arabidopsis thaliana]
 gi|75199883|sp|Q9S9Z0.1|HDG10_ARATH RecName: Full=Homeobox-leucine zipper protein HDG10; AltName:
           Full=HD-ZIP protein HDG10; AltName: Full=Homeodomain
           GLABRA 2-like protein 10; AltName: Full=Homeodomain
           transcription factor HDG10; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 10
 gi|5668786|gb|AAD46012.1|AC007894_10 Similar to gb|Z54356 HD-ZIP protein (Athb-10) from Arabidopsis
           thaliana and contains a PF|00046 homeobox domain
           [Arabidopsis thaliana]
 gi|332193611|gb|AEE31732.1| homeobox-leucine zipper protein HDG10 [Arabidopsis thaliana]
          Length = 708

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           +D+     ++  QV+ LE  +HECP P   +R+QL  E     N++ KQIK WFQNRR +
Sbjct: 15  IDSNNRRHHSNHQVQRLEAFFHECPHPDDSQRRQLGNEL----NLKHKQIKFWFQNRRTQ 70

Query: 82  EKQRKEASR---LQAVNRKLTAMNKLL 105
            +   E +    L+  N K+  +N+ +
Sbjct: 71  ARIHNEKADNIALRVENMKIRCVNEAM 97


>gi|449521341|ref|XP_004167688.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like,
           partial [Cucumis sativus]
          Length = 230

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 13/126 (10%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R + EQ+E+LER + E  K    R+Q+L +E      ++P+QI VWFQNRR R K +
Sbjct: 66  KKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKEL----GLQPRQIAVWFQNRRARWKAK 121

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFR--QQTQNAATLATTDTSC 143
           +       + ++  A+++    E  +LQ++V +L    +  R  Q  +N  +   TD S 
Sbjct: 122 QLEHLYDTLKQEFDAISR----EKHKLQEEVMKL---KSMLRELQAARNQVSTVYTDLSG 174

Query: 144 ESVVTS 149
           E  V S
Sbjct: 175 EETVES 180


>gi|357448581|ref|XP_003594566.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483614|gb|AES64817.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 660

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 83/387 (21%), Positives = 157/387 (40%), Gaps = 62/387 (16%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           SG   DS +S   K +       R++ +Q+  LE ++     P   ++ ++ ++      
Sbjct: 4   SGDEEDSDNSNESKRV------CRHSADQILKLEEIFKTLTHPDDNQKYEIAQQL----E 53

Query: 66  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE--- 122
           +EP+Q+K WFQN+R   K +     L+  N  L A N+ +++EN  +++++  L+ +   
Sbjct: 54  LEPQQVKWWFQNKRAHIKNKN----LKPANDALRAENERILKENMEMKERLKNLLCQSSC 109

Query: 123 ---NTFFRQQTQNA------ATLATTDTSCESVV------TSGQHHLTPQQQHQHPPRDA 167
              N+  + Q +NA        +   + S E  +      T G   L   +         
Sbjct: 110 NGSNSLKQLQVENARLKERYEMMQKKEVSLELKLGLPKSSTRGSTSLNLDRGSSSKSSLE 169

Query: 168 SPAGLLSIAEETLTEFLSKATGTAVEWVQ------MPGMKPGPDSIGIVAISHGC-TGV- 219
               ++ +A    TE L K       WV+      +   K   D    V   +G  T V 
Sbjct: 170 IQNPMMLVAGLAATEELLKLFRDESLWVKSQLNRRLVLEKNYEDVFPRVDHFNGAKTHVE 229

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYR----DCRSVEVVNVLPTGSSGT------IELLY 269
           +++   ++ +  T + E+  D   W           E + VL   SS        + L Y
Sbjct: 230 SSKDSQMLKIGATHLVEMFLDSEKWANLFPTIVNKAETIKVLERDSSQNQSGALLLGLCY 289

Query: 270 MQLYAP----TTLAPARDFWLLRYTSVLEDGSLVVCERSLNN-TQNGPSMPQAPHFVRAE 324
           +Q++      + L   R F+ LRY   +E G  V+ + S +   ++GP       F R  
Sbjct: 290 VQMHGEMHVLSPLVKPRQFYFLRYCVQVEAGIWVIADVSYDYLKEDGPH----SSFWR-- 343

Query: 325 MLPSGYLIRPCEGGGSIIHIVDHMDLE 351
             PSG +I+      S +  ++H++++
Sbjct: 344 -FPSGCMIQQISNETSKVSWIEHVEVD 369


>gi|414867890|tpg|DAA46447.1| TPA: outer cell layer4 [Zea mays]
          Length = 731

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 8/86 (9%)

Query: 38  LERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRK 97
           +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +++    +A N  
Sbjct: 1   MEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQQD----RADNVL 52

Query: 98  LTAMNKLLMEENDRLQKQVSQLVYEN 123
           L A N+ L  +N RLQ  +  +V  N
Sbjct: 53  LRAENESLKSDNYRLQAAIRNVVCPN 78



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 18/242 (7%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVN-VLPTGSSGTIELLYMQ--LYAPTTLAPARDFW 285
           LD  +  E+    PS     R+++++N    +G  G+  LL MQ  L  P+ L PAR+  
Sbjct: 291 LDANKWMELF---PSIVSKARTIQIINHGAASGHMGSGSLLLMQAELQFPSPLVPAREVV 347

Query: 286 LLRY-TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHI 344
             RY     ++G+  + +      Q      Q P  VR    PSG +I+    G S +  
Sbjct: 348 FFRYCVHNGDEGTWSLVDFPAEGFQ--LEALQTPSVVRCCRRPSGCIIQDMPNGYSSVVW 405

Query: 345 VDHMDL--EPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQP-SVTGWGRRP 400
           V+H ++  E   + +V +    S +       ++ L R   +++ E+++  +  G  R P
Sbjct: 406 VEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLLQRQCERLASELARNIADLGVIRTP 465

Query: 401 AA---LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD--VTVHVNSSPSKMMGVQLSY 455
            A   +  LSQR+   F+  ++    + W+ L     D   VT   N+ P +  GV L+ 
Sbjct: 466 EARTNMMKLSQRMITSFSANISASGSQSWTSLSETTEDTIRVTTRKNTDPGQPSGVILTA 525

Query: 456 VN 457
           V+
Sbjct: 526 VS 527


>gi|134035510|gb|ABO47743.1| homeobox protein [Gossypium hirsutum]
          Length = 275

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 13/146 (8%)

Query: 3   AVSSGGSRDSRDSGGQKMIMDNGKYV-----RYTPEQVEALERLYHECPKPSSMRRQQLI 57
           +VS  G   S +  G   + D+G ++     R   EQV+ALE+ +    K    R+ QL 
Sbjct: 50  SVSFSGVDKSEEVHGDDELSDDGSHLGEKKKRLNLEQVKALEKSFELGNKLEPERKVQLA 109

Query: 58  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS 117
           +       ++P+QI +WFQNRR R K ++      A+ ++  A    L  +ND LQ Q  
Sbjct: 110 KAL----GLQPRQIAIWFQNRRARWKTKQLEKDYDALKKQFEA----LKADNDALQAQNK 161

Query: 118 QLVYENTFFRQQTQNAATLATTDTSC 143
           +L  E    + +  N  +    +  C
Sbjct: 162 KLNAELLALKTKDSNETSCIKKENDC 187


>gi|414867888|tpg|DAA46445.1| TPA: outer cell layer4 isoform 1 [Zea mays]
 gi|414867889|tpg|DAA46446.1| TPA: outer cell layer4 isoform 2 [Zea mays]
          Length = 746

 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 8/85 (9%)

Query: 39  ERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKL 98
            RL+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +++    +A N  L
Sbjct: 17  HRLFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQQD----RADNVLL 68

Query: 99  TAMNKLLMEENDRLQKQVSQLVYEN 123
            A N+ L  +N RLQ  +  +V  N
Sbjct: 69  RAENESLKSDNYRLQAAIRNVVCPN 93



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 18/242 (7%)

Query: 229 LDPTRVAEILKDRPSWYRDCRSVEVVNV-LPTGSSGTIELLYMQ--LYAPTTLAPARDFW 285
           LD  +  E+    PS     R+++++N    +G  G+  LL MQ  L  P+ L PAR+  
Sbjct: 306 LDANKWMELF---PSIVSKARTIQIINHGAASGHMGSGSLLLMQAELQFPSPLVPAREVV 362

Query: 286 LLRY-TSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHI 344
             RY     ++G+  + +      Q      Q P  VR    PSG +I+    G S +  
Sbjct: 363 FFRYCVHNGDEGTWSLVDFPAEGFQ--LEALQTPSVVRCCRRPSGCIIQDMPNGYSSVVW 420

Query: 345 VDHMDL--EPWSVPEVLRPLYESSTLIAQKTTMAAL-RHLRQISQEVSQP-SVTGWGRRP 400
           V+H ++  E   + +V +    S +       ++ L R   +++ E+++  +  G  R P
Sbjct: 421 VEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLLQRQCERLASELARNIADLGVIRTP 480

Query: 401 AA---LRALSQRLSRGFNEALNGFTDEGWSMLESDGIDD--VTVHVNSSPSKMMGVQLSY 455
            A   +  LSQR+   F+  ++    + W+ L     D   VT   N+ P +  GV L+ 
Sbjct: 481 EARTNMMKLSQRMITSFSANISASGSQSWTSLSETTEDTIRVTTRKNTDPGQPSGVILTA 540

Query: 456 VN 457
           V+
Sbjct: 541 VS 542


>gi|356512547|ref|XP_003524980.1| PREDICTED: uncharacterized protein LOC100799054 [Glycine max]
          Length = 331

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 16/143 (11%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R +  QV+ LE+ + E  K    R+ +L ++      ++P+Q+ +WFQNRR R K +
Sbjct: 83  KKRRLSASQVQFLEKSFEEENKLEPERKTKLAKDL----GLQPRQVAIWFQNRRARWKNK 138

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTS 142
              K+   L A    L +    L++E D+L+ +V+ L  E    R + +     A +   
Sbjct: 139 QLEKDYETLHASFESLKSNYDCLLKEKDKLKAEVASLT-EKVLARGKQEGHMKQAES--- 194

Query: 143 CESVVTSGQHHLTPQQQHQHPPR 165
            ES  T G  HL    Q Q PP+
Sbjct: 195 -ESEETKGLLHL----QEQEPPQ 212


>gi|312283295|dbj|BAJ34513.1| unnamed protein product [Thellungiella halophila]
          Length = 120

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 12/108 (11%)

Query: 17  GQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQI 71
           G++   D+G     K  R   EQ++ LE+ +    K  S R+ +L R       ++P+QI
Sbjct: 14  GEEEFSDDGSKMGEKKRRLNMEQLKTLEKNFEIGNKLESDRKLELARAL----GLQPRQI 69

Query: 72  KVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 116
            +WFQNRR R K ++      A+ R+  ++   N++L  +N +LQ QV
Sbjct: 70  AIWFQNRRARSKTKQLERDYDALKRQFESLKDENEILQTQNQKLQAQV 117


>gi|223947725|gb|ACN27946.1| unknown [Zea mays]
          Length = 647

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 96/429 (22%), Positives = 169/429 (39%), Gaps = 88/429 (20%)

Query: 215 GCTGVAARACGLVGLDPT-RVAEILKDRPSWYRDCRSV---------EVVNVLPTGSSGT 264
           G    A+R  GLV +D +  + E L D   W  D  S          EV + +    +G 
Sbjct: 209 GYVSEASRESGLVIIDNSLALVETLMDVRRW-SDMFSCMIAKATVLEEVTSGIAGSRNGA 267

Query: 265 IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNN---TQNGPSMPQAPHFV 321
           + L+  +L   + L P R+   LR+   L +G+  V + S++      N  +   A + +
Sbjct: 268 LLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGN-I 326

Query: 322 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL 381
           R   LPSG +++    G   +  V++ + +  SV ++ RPL  S      +  +A L+  
Sbjct: 327 RCRRLPSGCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQ 386

Query: 382 RQISQEVSQPS---------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESD 432
            +    +  P          +T  G+R  ++  L++R++  F   ++  +   WS L  D
Sbjct: 387 CECLAILMSPDTVSANDSSVITQEGKR--SMLKLARRMTENFCAGVSASSAREWSKL--D 442

Query: 433 GI-----DDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFL 487
           G      +DV V    S  +            P     V+ + A+ +   V P  L  FL
Sbjct: 443 GAAGSIGEDVRVMARKSVDE------------PGEPPGVVLSAATSVWVPVAPEKLFNFL 490

Query: 488 REH--RSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKL 545
           R+   R+EW     D  S      GP             Q +  +A   EH   + +++ 
Sbjct: 491 RDEQLRAEW-----DILS----NGGPM------------QEMANIAKGQEHGNSVSLLRA 529

Query: 546 ENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPI 596
             M+  +  M++     L + C+    + V      V+AP+D            S    +
Sbjct: 530 SAMSANQSSMLI-----LQETCTDASGSMV------VYAPVDIPAMQLVMNGGDSTYVAL 578

Query: 597 IPSGFRIIP 605
           +PSGF I+P
Sbjct: 579 LPSGFAILP 587


>gi|21555784|gb|AAM63933.1| homeobox gene 13 protein [Arabidopsis thaliana]
          Length = 288

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 16/140 (11%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
            G  D  D G Q       K  R   EQV+ LE+ +    K    R+ QL R       +
Sbjct: 64  NGEEDYSDDGSQM----GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GL 115

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRK---LTAMNKLLMEENDRLQKQVSQLVYEN 123
           +P+QI +WFQNRR R K ++       + R+   L A N LL   N +LQ ++  L    
Sbjct: 116 QPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFHTLKAENDLLQTHNQKLQAEIMGLKN-- 173

Query: 124 TFFRQQTQNAATLATTDTSC 143
              R+QT++      T+ SC
Sbjct: 174 ---REQTESINLNKETEGSC 190


>gi|414867746|tpg|DAA46303.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 319

 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 21/118 (17%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHE----CPKPSSMRRQQLIRECP 61
           +GG  D  DSGG        K +R + +Q   LE  + E     PK  +   +QL     
Sbjct: 159 AGGGSDDEDSGGGSR-----KKLRLSKDQAAVLEESFKEHNTLNPKQKAALAKQL----- 208

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
              N++P+Q++VWFQNRR R K ++     + + R      + L EEN RLQ++V++L
Sbjct: 209 ---NLKPRQVEVWFQNRRARTKLKQTEVDCEFLKR----CCETLTEENRRLQREVAEL 259


>gi|15222452|ref|NP_177136.1| homeobox-leucine zipper protein ATHB-13 [Arabidopsis thaliana]
 gi|118573191|sp|Q8LC03.2|ATB13_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-13; AltName:
           Full=HD-ZIP protein ATHB-13; AltName: Full=Homeodomain
           transcription factor ATHB-13
 gi|6644295|gb|AAF20996.1|AF208044_1 homeodomain leucine-zipper protein ATHB13 [Arabidopsis thaliana]
 gi|12325190|gb|AAG52541.1|AC013289_8 homeobox gene 13 protein; 11736-10437 [Arabidopsis thaliana]
 gi|15982929|gb|AAL09811.1| At1g69780/T6C23_2 [Arabidopsis thaliana]
 gi|22137260|gb|AAM91475.1| At1g69780/T6C23_2 [Arabidopsis thaliana]
 gi|332196853|gb|AEE34974.1| homeobox-leucine zipper protein ATHB-13 [Arabidopsis thaliana]
          Length = 294

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 16/140 (11%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
            G  D  D G Q       K  R   EQV+ LE+ +    K    R+ QL R       +
Sbjct: 70  NGEEDYSDDGSQM----GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GL 121

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRK---LTAMNKLLMEENDRLQKQVSQLVYEN 123
           +P+QI +WFQNRR R K ++       + R+   L A N LL   N +LQ ++  L    
Sbjct: 122 QPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKN-- 179

Query: 124 TFFRQQTQNAATLATTDTSC 143
              R+QT++      T+ SC
Sbjct: 180 ---REQTESINLNKETEGSC 196


>gi|125549829|gb|EAY95651.1| hypothetical protein OsI_17516 [Oryza sativa Indica Group]
          Length = 162

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 4/61 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 104 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKVK 159

Query: 86  K 86
           K
Sbjct: 160 K 160


>gi|356532435|ref|XP_003534778.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 714

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 13/107 (12%)

Query: 5   SSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILS 64
           S GGS D     G++       Y R +  Q   LER   +CP P   +R+QL  E     
Sbjct: 7   SPGGSGDEGSHQGRR-----PSYKRLSSAQTARLERFIKDCPHPDEAQRRQLASEI---- 57

Query: 65  NIEPKQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLMEE 108
            +E KQIK WFQN+R + K   +R + + L+  N ++   N LLM+E
Sbjct: 58  GLETKQIKFWFQNKRTQIKNQHERADNTALRVENDRIHTEN-LLMKE 103



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 14/140 (10%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIELLYMQ 271
           A +  G+V ++  ++ ++  D   W     ++    E + V+  G     SG ++L++ Q
Sbjct: 282 ATKESGIVSINSIQLIDMFLDPDKWVNLFPTIVTKAETMKVIENGLVGSRSGALQLMFEQ 341

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
           ++  + L   R+F  LRY   +E+G  V+ + S +      S  Q   F  +   PSG +
Sbjct: 342 MHVLSPLVQPREFQFLRYCQQIEEGVWVIADVSFD------SFRQKTSFFHSWRHPSGCM 395

Query: 332 IRPCEGGGSIIHIVDHMDLE 351
           I+    G S++  V+H++++
Sbjct: 396 IQEMPNGCSMVTWVEHVEVD 415


>gi|297838751|ref|XP_002887257.1| ATHB13 [Arabidopsis lyrata subsp. lyrata]
 gi|297333098|gb|EFH63516.1| ATHB13 [Arabidopsis lyrata subsp. lyrata]
          Length = 293

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 16/151 (10%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
            G  D  D G Q       K  R   EQV+ LE+ +    K    R+ QL R       +
Sbjct: 70  NGEEDYSDDGSQM----GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GL 121

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRK---LTAMNKLLMEENDRLQKQVSQLVYEN 123
           +P+QI +WFQNRR R K ++       + R+   L A N LL   N +LQ ++  L    
Sbjct: 122 QPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKN-- 179

Query: 124 TFFRQQTQNAATLATTDTSCESVVTSGQHHL 154
              R+QT++      T+ SC +   +   +L
Sbjct: 180 ---REQTESINLNKETEGSCSNRSDNSSDNL 207


>gi|351727955|ref|NP_001238458.1| homeodomain-leucine zipper protein 57 [Glycine max]
 gi|6018089|gb|AAF01765.1|AF184278_1 homeodomain-leucine zipper protein 57 [Glycine max]
          Length = 288

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 7/98 (7%)

Query: 25  GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
           GK  R T EQV+ LER +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 28  GKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKEL----GLQPRQVAIWFQNRRARFKT 83

Query: 85  R---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           +   K+   L+A   +L +  + L++END+L+ +V+ L
Sbjct: 84  KQLEKDYGVLKASYDRLKSDYESLVQENDKLKAEVNSL 121


>gi|334188232|ref|NP_199499.3| homeobox-leucine zipper protein HDG5 [Arabidopsis thaliana]
 gi|322510124|sp|Q9FJS2.3|HDG5_ARATH RecName: Full=Homeobox-leucine zipper protein HDG5; AltName:
           Full=HD-ZIP protein HDG5; AltName: Full=Homeodomain
           GLABRA 2-like protein 5; AltName: Full=Homeodomain
           transcription factor HDG5; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 5
 gi|332008060|gb|AED95443.1| homeobox-leucine zipper protein HDG5 [Arabidopsis thaliana]
          Length = 826

 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 8/94 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E L+ E P P   +R++L  E      ++P+Q+K WFQNRR + K +
Sbjct: 114 RYHRHTNRQIQEMEALFKENPHPDDKQRKRLSAEL----GLKPRQVKFWFQNRRTQMKAQ 169

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           ++ +     N  L A N  L  EN  LQ ++  L
Sbjct: 170 QDRNE----NVMLRAENDNLKSENCHLQAELRCL 199


>gi|413952729|gb|AFW85378.1| hypothetical protein ZEAMMB73_822854 [Zea mays]
          Length = 548

 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 43/296 (14%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSGTIE---LLYMQL 272
            +R  GLV +    + ++  D   W      +    + V+VL  G  G  E   ++Y +L
Sbjct: 116 GSRDSGLVFMSAVALVDVFMDTNKWMEFFPGIVSKAQTVDVLVNGLCGRSESLIMMYEEL 175

Query: 273 YAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHF---VRAEMLPSG 329
           +  T + P R+   LRY   +E G   V + SL+  ++        H+    R+  +PSG
Sbjct: 176 HIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLDGQRDA-------HYGVPSRSRRMPSG 228

Query: 330 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTLIAQKTTMAAL-----RHLRQ 383
            LI     G S +  V+H+++E      VL R L  S         +AAL     R    
Sbjct: 229 CLIADMSNGYSKVTWVEHLEIEHMLPINVLYRNLVLSGAAFGAHRWLAALQRACERFASL 288

Query: 384 ISQEVSQPSVTGW---GRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVH 440
            +  V    V G    G+R  ++  LSQR+   F  +L+    + W++L   G  DV+V 
Sbjct: 289 ATLGVPHHDVAGVTPEGKR--SMMRLSQRMVSSFCASLSSSPLQRWTLLS--GTTDVSVC 344

Query: 441 VNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
           V++  S   G             N V+ + A+ +   VP   +  F+R+   RS+W
Sbjct: 345 VSTHRSTDSG-----------QPNGVVLSAATSIWLPVPGDHVFAFVRDENARSQW 389


>gi|413934246|gb|AFW68797.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 348

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 9/116 (7%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
           GG+ D  D  G        +  R + EQV  LER +    K    R+ QL R       +
Sbjct: 102 GGASD--DEEGSAAAACGERKRRLSVEQVRTLERSFEVANKLEPERKAQLARAL----GL 155

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 119
           +P+Q+ +WFQNRR R K ++      A+ R+L A    N  L+  N +LQ ++  L
Sbjct: 156 QPRQVAIWFQNRRARWKTKQLEKDYDALRRQLDAARAENDALLSHNKKLQTEIMAL 211


>gi|356570052|ref|XP_003553206.1| PREDICTED: uncharacterized protein LOC100804328 [Glycine max]
          Length = 324

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 17/134 (12%)

Query: 25  GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
           GK  R T EQV+ L+  +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 80  GKTRRLTSEQVQFLQSNFEVENKLEPERKVQLAKEL----GMQPRQVAIWFQNRRARFKT 135

Query: 85  RK---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF--RQQTQNAATLATT 139
           ++   +   L+A    L      L++END+L+++V+ L   N      Q+ QN     + 
Sbjct: 136 KQLETDYGMLKASYHVLKRDYDNLLQENDKLKEEVNSL---NRLIPREQEEQN-----SD 187

Query: 140 DTSCESVVTSGQHH 153
           DTSC++V +  + H
Sbjct: 188 DTSCDTVNSRHKEH 201


>gi|119331578|gb|ABL63115.1| DNA-binding protein [Catharanthus roseus]
          Length = 282

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 10/121 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +QV+ LE+ +    K    R+ QL +E      ++P+Q+ +WFQNRR R K +
Sbjct: 41  KKRRLTADQVQFLEKSFEVENKLEPERKVQLAKEL----GLQPRQVAIWFQNRRARYKTK 96

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTS 142
              KE   L++   KL A    L +EN++L+ +V +L+ E    R++ +  +   T D+ 
Sbjct: 97  QLEKEYDSLKSSFDKLNADYDSLFKENEKLKNEV-KLLTEKLLMREKEKGKSK--TCDSL 153

Query: 143 C 143
           C
Sbjct: 154 C 154


>gi|9759430|dbj|BAB10227.1| homeobox protein [Arabidopsis thaliana]
          Length = 783

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 8/94 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y R+T  Q++ +E L+ E P P   +R++L  E      ++P+Q+K WFQNRR + K +
Sbjct: 114 RYHRHTNRQIQEMEALFKENPHPDDKQRKRLSAEL----GLKPRQVKFWFQNRRTQMKAQ 169

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           ++ +     N  L A N  L  EN  LQ ++  L
Sbjct: 170 QDRNE----NVMLRAENDNLKSENCHLQAELRCL 199


>gi|238498468|ref|XP_002380469.1| homeobox  transcription factor, putative [Aspergillus flavus
           NRRL3357]
 gi|220693743|gb|EED50088.1| homeobox transcription factor, putative [Aspergillus flavus
           NRRL3357]
          Length = 710

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 26/113 (23%)

Query: 21  IMDNGKYV------RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           IMD  +Y       R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  W
Sbjct: 57  IMDYEEYAENLSRPRLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANW 112

Query: 75  FQNRRCREKQRK----------------EASRLQAVNRKLTAMNKLLMEENDR 111
           FQNRR + KQ+K                EA+R++  N + +  N  + EE D+
Sbjct: 113 FQNRRAKAKQQKRQEEFERMQKAKTEAEEAARIKIENAEKSESNPDVKEETDK 165


>gi|168060572|ref|XP_001782269.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666282|gb|EDQ52941.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 328

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 7/110 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +QV +LER +    K    R+ QL +E      + P+Q+ VWFQNRR R K +
Sbjct: 94  KKRRLTLDQVRSLERNFEVENKLEPDRKMQLAKEL----GMRPRQVAVWFQNRRARWKTK 149

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
              ++   L+A  ++L A  +L+++E + L+ ++ +L  +   ++Q   N
Sbjct: 150 QLERDYETLEAGFKRLKADYELVLDEKNYLKAELQRLSGDTLGYKQGDDN 199


>gi|391865387|gb|EIT74671.1| homeobox transcription factor, putative [Aspergillus oryzae 3.042]
          Length = 710

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 26/113 (23%)

Query: 21  IMDNGKYV------RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           IMD  +Y       R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  W
Sbjct: 57  IMDYEEYAENLSRPRLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANW 112

Query: 75  FQNRRCREKQRK----------------EASRLQAVNRKLTAMNKLLMEENDR 111
           FQNRR + KQ+K                EA+R++  N + +  N  + EE D+
Sbjct: 113 FQNRRAKAKQQKRQEEFERMQKAKTEAEEAARIKIENAEKSESNPDVKEETDK 165


>gi|224053723|ref|XP_002297947.1| predicted protein [Populus trichocarpa]
 gi|222845205|gb|EEE82752.1| predicted protein [Populus trichocarpa]
          Length = 196

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 7/102 (6%)

Query: 21  IMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 80
           I  N    R+T EQ++ LE ++    +P S  +QQL  E      +EP+Q+ +WFQNRR 
Sbjct: 11  IQKNAYKRRFTDEQIKFLEFMFESESRPESRVKQQLASEL----GLEPRQVAIWFQNRRA 66

Query: 81  REKQR---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           R K +   KE S L+A    L +  + L  E   L  Q+ +L
Sbjct: 67  RLKTKQIEKEYSILKASYDVLASSFESLKREKQSLIIQLHKL 108


>gi|308080696|ref|NP_001183865.1| uncharacterized protein LOC100502458 [Zea mays]
 gi|238015104|gb|ACR38587.1| unknown [Zea mays]
 gi|408690316|gb|AFU81618.1| HB-type transcription factor, partial [Zea mays subsp. mays]
 gi|413956877|gb|AFW89526.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 344

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 7/106 (6%)

Query: 14  DSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKV 73
           D G  + +    K  R   EQV  LE+ +    K  + R+ QL R       ++P+Q+ +
Sbjct: 103 DDGSLQAVGPGEKKRRLNVEQVRTLEKNFELGNKLEAERKLQLARAL----GLQPRQVAI 158

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 116
           WFQNRR R K ++      A+ R+L A+   N  L+  N +LQ ++
Sbjct: 159 WFQNRRARWKTKQLEKDYDALRRQLDAVKADNDALLSHNKKLQAEI 204


>gi|242009361|ref|XP_002425456.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
 gi|212509292|gb|EEB12718.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
          Length = 433

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 15/104 (14%)

Query: 6   SGGSRDS---RDSGGQKMIMDNGKYVR----YTPEQVEALERLYHECPKPSSMRRQQLIR 58
           S   RDS   R SGG   +  +GK  R       +Q+  L   Y   P+P ++ ++QL+ 
Sbjct: 197 SNKGRDSGSCRSSGGTNKVSSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVE 256

Query: 59  ECPILSNIEPKQIKVWFQNRRCREKQR----KEASRLQAVNRKL 98
               ++ + P+ I+VWFQN+RC++K+R    K+  + +   RKL
Sbjct: 257 ----MTGLSPRVIRVWFQNKRCKDKKRAILMKQQLQQEKDGRKL 296


>gi|357487803|ref|XP_003614189.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
 gi|355515524|gb|AES97147.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
          Length = 373

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 16/89 (17%)

Query: 26  KYVR-YTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
           +Y R +TP Q+E LE ++ ECPKP+  ++ QL +E  +       QI+ WFQN+R + K 
Sbjct: 36  RYRRPHTPNQLERLEEVFKECPKPNEKQKLQLSKELALSYG----QIRFWFQNKRTQTKA 91

Query: 85  RKEASRLQAVNRKLTAMNKLLMEENDRLQ 113
           + E +            N+LL  END+++
Sbjct: 92  KLERND-----------NRLLRAENDKIR 109


>gi|169781668|ref|XP_001825297.1| hypothetical protein AOR_1_602074 [Aspergillus oryzae RIB40]
 gi|83774039|dbj|BAE64164.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 710

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 26/113 (23%)

Query: 21  IMDNGKYV------RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           IMD  +Y       R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  W
Sbjct: 57  IMDYEEYAENLSRPRLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANW 112

Query: 75  FQNRRCREKQRK----------------EASRLQAVNRKLTAMNKLLMEENDR 111
           FQNRR + KQ+K                EA+R++  N + +  N  + EE D+
Sbjct: 113 FQNRRAKAKQQKRQEEFERMQKAKTEAEEAARIKIENAEKSESNPDVKEETDK 165


>gi|113205186|gb|AAT39931.2| Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]
          Length = 173

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 12/119 (10%)

Query: 8   GSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIE 67
           G  D  D G Q       K  R   EQV+ LE+ +    K    R+ QL R       ++
Sbjct: 65  GEDDLSDDGSQA----GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQ 116

Query: 68  PKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF 126
           P+QI +WFQNRR R K ++     + + R+  A+      END LQ Q  +L  E  F 
Sbjct: 117 PRQIAIWFQNRRARWKTKQLEKDYEVLKRQFDAIKA----ENDALQTQNQKLHAELVFL 171


>gi|225456662|ref|XP_002271692.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Vitis
           vinifera]
          Length = 317

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 8/119 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +QV+ LER +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 81  KKRRLTADQVQFLERNFEVENKLEPERKVQLAKDL----GLQPRQVAIWFQNRRARWKTK 136

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
              K+   LQA    L A  + L++E D L+ +V  L+ +    +++ +    ++ TDT
Sbjct: 137 QLEKDFGALQASYNSLKAEYENLLKEKDELKTEVI-LLTDKLLVKEKERGNLEVSNTDT 194


>gi|187609463|sp|A3BYC1.2|HOX25_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX25; AltName:
           Full=HD-ZIP protein HOX25; AltName: Full=Homeodomain
           transcription factor HOX25; AltName: Full=OsHox25
          Length = 320

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 8/92 (8%)

Query: 29  RYTPEQVEALERLYHECP-KPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK- 86
           R T EQV ALER + E   K    R+ +L R       I P+Q+ VWFQNRR R K ++ 
Sbjct: 85  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWKTKQL 140

Query: 87  --EASRLQAVNRKLTAMNKLLMEENDRLQKQV 116
             +  RL+A + +L A    L  +N+ L+ QV
Sbjct: 141 ELDFDRLRAAHDELLAGRTALAADNESLRSQV 172


>gi|357153545|ref|XP_003576486.1| PREDICTED: homeobox-leucine zipper protein HOX25-like [Brachypodium
           distachyon]
          Length = 296

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 8/98 (8%)

Query: 29  RYTPEQVEALERLYHECP-KPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR-- 85
           R T EQV ALER + E   K    R+ +L R       + P+Q+ VWFQNRR R K +  
Sbjct: 89  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GMAPRQVAVWFQNRRARWKAKQL 144

Query: 86  -KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
            ++   L+A +  L A    L+ +ND L+ QV  L  E
Sbjct: 145 ERDFDALRAAHDHLLASRDALLADNDSLRSQVISLTEE 182


>gi|147860587|emb|CAN83969.1| hypothetical protein VITISV_039798 [Vitis vinifera]
          Length = 333

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 8/119 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +QV+ LER +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 97  KKRRLTADQVQFLERNFEVENKLEPERKVQLAKDL----GLQPRQVAIWFQNRRARWKTK 152

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
              K+   LQA    L A  + L++E D L+ +V  L+ +    +++ +    ++ TDT
Sbjct: 153 QLEKDFGALQASYNSLKAEYENLLKEKDELKTEVI-LLTDKLLVKEKERGNLEVSNTDT 210


>gi|326516084|dbj|BAJ88065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 296

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 29  RYTPEQVEALERLYHECP-KPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR-- 85
           R T EQV ALER + E   K    R+ +L R       I P+Q+ VWFQNRR R K +  
Sbjct: 82  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWKAKQL 137

Query: 86  -KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
            ++   L+A + +L A    L+ +N  L+ QV+ L 
Sbjct: 138 EQDFDALRAAHAELLAGRDALLADNHHLRSQVTSLT 173


>gi|297726893|ref|NP_001175810.1| Os09g0379600 [Oryza sativa Japonica Group]
 gi|255678854|dbj|BAH94538.1| Os09g0379600 [Oryza sativa Japonica Group]
          Length = 286

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 8/92 (8%)

Query: 29  RYTPEQVEALERLYHECP-KPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK- 86
           R T EQV ALER + E   K    R+ +L R       I P+Q+ VWFQNRR R K ++ 
Sbjct: 51  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWKTKQL 106

Query: 87  --EASRLQAVNRKLTAMNKLLMEENDRLQKQV 116
             +  RL+A + +L A    L  +N+ L+ QV
Sbjct: 107 ELDFDRLRAAHDELLAGRTALAADNESLRSQV 138


>gi|22326632|ref|NP_196289.2| homeobox-leucine zipper protein HAT14 [Arabidopsis thaliana]
 gi|90101577|sp|P46665.3|HAT14_ARATH RecName: Full=Homeobox-leucine zipper protein HAT14; AltName:
           Full=Homeodomain-leucine zipper protein HAT14;
           Short=HD-ZIP protein 14
 gi|110743069|dbj|BAE99427.1| homeobox protein [Arabidopsis thaliana]
 gi|167730916|emb|CAD24012.2| homeodomain-leucine zipper protein HAT14 [Arabidopsis thaliana]
 gi|332003670|gb|AED91053.1| homeobox-leucine zipper protein HAT14 [Arabidopsis thaliana]
          Length = 336

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 13/148 (8%)

Query: 3   AVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           + S   + D+ D  G        K +R + +Q   LE  + E    S++  +Q I     
Sbjct: 172 SASRASNEDNDDENGS-----TRKKLRLSKDQSAFLEDSFKE---HSTLNPKQKIALAKQ 223

Query: 63  LSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
           L N+ P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V +L   
Sbjct: 224 L-NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTL 278

Query: 123 NTFFRQQTQNAATLATTDTSCESVVTSG 150
            T      Q  AT  T   SCE V TS 
Sbjct: 279 KTSTPFYMQLPATTLTMCPSCERVATSA 306


>gi|356528152|ref|XP_003532669.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 784

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 22/113 (19%)

Query: 25  GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
           G+  R     V  LE ++ ECP P+  RR+Q+  E  +  N    Q+K WFQNR+     
Sbjct: 10  GRGNRLNHATVSKLEAIFRECPYPNENRRRQISEELELSLN----QVKFWFQNRK----- 60

Query: 85  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLA 137
               ++L+A++ ++   N  L  EN+ +Q        EN   R+  QNA  L+
Sbjct: 61  ----TKLKAISERID--NNALRRENENIQS-------ENLLMRESLQNAFCLS 100



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 57/111 (51%), Gaps = 7/111 (6%)

Query: 242 PSWYRDCRSVEVV-NVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVV 300
           P+     ++++V+ N L    SG + L+  +++  + L P R F+ LRY   +++G  V+
Sbjct: 385 PTIVTKAQTIQVLENGLVGNRSGALLLINAEMHILSHLVPTRQFYFLRYCKQIKEGVWVI 444

Query: 301 CERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLE 351
            + S+++ +    +P      R    PSG LI+    G   +  V+H++++
Sbjct: 445 GDVSIDSLEYKTIVP------RIWRRPSGCLIQEMNHGLCKVSWVEHVEVD 489


>gi|356570812|ref|XP_003553578.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Glycine max]
          Length = 214

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 18/147 (12%)

Query: 22  MDNG---KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNR 78
           MD G   K  R T  Q+E LER + E  K    R+ +L RE      ++P+QI VWFQNR
Sbjct: 50  MDRGNKEKKKRLTNNQIELLERSFQEEIKLDPERKMKLSREL----GLQPRQIAVWFQNR 105

Query: 79  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ---TQNAAT 135
           R R K    A +L+ +   L     ++  E  +LQ++V +L  +    +QQ   TQ    
Sbjct: 106 RTRWK----AKQLEHLYDMLKHQYDVVSNEKQKLQEEVIKL--KAMLSKQQGYWTQKFG- 158

Query: 136 LATTDTSCESVVTSGQHHLTPQQQHQH 162
              T+ S E  V S    L  +   +H
Sbjct: 159 -GYTEISGEETVESTSEGLRGKSNIEH 184


>gi|315052996|ref|XP_003175872.1| hypothetical protein MGYG_03394 [Arthroderma gypseum CBS 118893]
 gi|311341187|gb|EFR00390.1| hypothetical protein MGYG_03394 [Arthroderma gypseum CBS 118893]
          Length = 717

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 79/199 (39%), Gaps = 22/199 (11%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +++   ++  WFQNRR +
Sbjct: 61  VENLSRPRLTKEQVEILESQFQAHPKPNSNTKRQLA----LQTSLTLPRVANWFQNRRAK 116

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT--- 138
            KQ+K     +    K+ A  K +  E    ++Q S+   E     Q  +N+    T   
Sbjct: 117 AKQQKRQEEFE----KMQAKEKAMAAEGAGSKQQSSESSDEQQKSEQDQKNSMPTPTDAR 172

Query: 139 -TDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 197
            T +SC      G H L         P D  P     +            +    E +  
Sbjct: 173 GTSSSCSE---QGDHGL-------QTPADEKPEPKFEVVRHHTEAKAEVQSSEPAELISS 222

Query: 198 PGMKPGPDSIGIVAISHGC 216
           P +K G +  G +A  H  
Sbjct: 223 PSLKDGQEMSGAIASVHNS 241


>gi|414871481|tpg|DAA50038.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 363

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R + +QV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K ++  
Sbjct: 135 RLSVDQVRTLERSFEVANKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTKQLE 190

Query: 89  SRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 119
               A+ R+L A    N  L+  N +LQ ++  L
Sbjct: 191 KDYDALRRQLDAARAENDALLSHNKKLQAEIMAL 224


>gi|297810781|ref|XP_002873274.1| homeobox-leucine zipper protein 14 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319111|gb|EFH49533.1| homeobox-leucine zipper protein 14 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 343

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 11/131 (8%)

Query: 23  DNG---KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRR 79
           +NG   K +R + +Q   LE  + E    S++  +Q I     L N+ P+Q++VWFQNRR
Sbjct: 184 ENGSTRKKLRLSKDQSAFLEDSFKEH---STLNPKQKIALAKQL-NLRPRQVEVWFQNRR 239

Query: 80  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATT 139
            R K ++     + + R   +    L EEN RLQK+V +L    T      Q  AT  T 
Sbjct: 240 ARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTLKTSTPFYMQLPATTLTM 295

Query: 140 DTSCESVVTSG 150
             SCE V TS 
Sbjct: 296 CPSCERVATSA 306


>gi|358254958|dbj|GAA56650.1| insulin gene enhancer protein isl-2b [Clonorchis sinensis]
          Length = 712

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 6/82 (7%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVR--YTPEQVEALERLYHECPKPSSMRRQQLIRECPILS 64
           GG R+ +  G ++        VR     +Q+  L   Y   P+P ++ ++QL+     ++
Sbjct: 290 GGLRNGKSGGSKRSKDQKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVE----MT 345

Query: 65  NIEPKQIKVWFQNRRCREKQRK 86
           ++ P+ I+VWFQN+RC++K+R+
Sbjct: 346 SLSPRVIRVWFQNKRCKDKKRQ 367


>gi|242039759|ref|XP_002467274.1| hypothetical protein SORBIDRAFT_01g022420 [Sorghum bicolor]
 gi|241921128|gb|EER94272.1| hypothetical protein SORBIDRAFT_01g022420 [Sorghum bicolor]
          Length = 362

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R + EQV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K ++  
Sbjct: 124 RLSVEQVRTLERSFEVANKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTKQLE 179

Query: 89  SRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 119
               A+ R+L A    N  L+  N +LQ ++  L
Sbjct: 180 KDYDALRRQLDAARAENDTLLSHNKKLQAEIMAL 213


>gi|226530684|ref|NP_001150309.1| homeobox-leucine zipper protein HAT7 [Zea mays]
 gi|195638280|gb|ACG38608.1| homeobox-leucine zipper protein HAT7 [Zea mays]
          Length = 341

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 14/114 (12%)

Query: 9   SRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           S D   +GG+K         R   EQV  LE+ +    K    R+ QL R       ++P
Sbjct: 107 SDDGSQAGGEKK-------RRLNVEQVRTLEKNFELGNKLEPERKLQLARAL----GLQP 155

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 119
           +Q+ +WFQNRR R K ++      A+ R+L A+   N  L+  N +LQ ++  L
Sbjct: 156 RQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKADNDALLSHNKKLQAEILSL 209


>gi|226528244|ref|NP_001151416.1| homeobox-leucine zipper protein HAT7 [Zea mays]
 gi|195646650|gb|ACG42793.1| homeobox-leucine zipper protein HAT7 [Zea mays]
          Length = 360

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R + +QV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K ++  
Sbjct: 132 RXSVDQVRTLERSFEVANKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTKQLE 187

Query: 89  SRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 119
               A+ R+L A    N  L+  N +LQ ++  L
Sbjct: 188 KDYDALRRQLDAARAENDALLSHNKKLQAEIMAL 221


>gi|363806696|ref|NP_001242266.1| uncharacterized protein LOC100808033 [Glycine max]
 gi|255647094|gb|ACU24015.1| unknown [Glycine max]
          Length = 295

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 34/199 (17%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQL 56
           M+ SSG       +  ++ + D+G     K  R   EQV+ LE+ +    K    R+ QL
Sbjct: 59  MSFSSGIEHGEEANNAEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQL 118

Query: 57  IRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQ 113
            R       ++P+QI +WFQNRR R K ++       + R+  A+   N  L  +N +LQ
Sbjct: 119 ARAL----GLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQYEAVKSDNDALQAQNQKLQ 174

Query: 114 KQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQH--------------HLTPQQQ 159
            ++  L       R+ T++      T+ SC +   +                 H T QQQ
Sbjct: 175 AEILALKS-----REPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPHFTHQQQ 229

Query: 160 HQH---PPRDASPAGLLSI 175
                 PP    PAG++ +
Sbjct: 230 PSRPFFPPFSVRPAGVVQL 248


>gi|3868831|dbj|BAA34236.1| CRHB2 [Ceratopteris richardii]
          Length = 308

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 23/123 (18%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHE----CPKPSSMRRQQL 56
           ++ VSS  S D  +SG  +      K +R + EQ   LE  + E     PK  S+  +QL
Sbjct: 175 LLEVSSRNS-DEEESGSAR------KKLRLSKEQSALLEESFKEHSTLNPKQKSLLAKQL 227

Query: 57  IRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV 116
                   N+ P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V
Sbjct: 228 --------NLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCES----LTEENRRLQKEV 275

Query: 117 SQL 119
           ++L
Sbjct: 276 AEL 278


>gi|326581036|gb|ADZ96470.1| HD-Zip subfamily I trancription factor [Helianthus annuus]
          Length = 313

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 10/116 (8%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
            G  +  D G Q  ++   K  R   EQV+ LER +    K    R+ QL R       +
Sbjct: 75  NGEDELSDDGSQ--LLAGEKKRRLNMEQVKTLERNFELGNKLEPERKMQLARAL----GL 128

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
           +P+QI +WFQNRR R K ++      A+ R+  A+      END LQ Q  +L  E
Sbjct: 129 QPRQIAIWFQNRRARWKTKQLEKDYDALKRQFEAVKA----ENDSLQSQNHKLHAE 180


>gi|414865055|tpg|DAA43612.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 344

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 14/114 (12%)

Query: 9   SRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           S D   +GG+K         R   EQV  LE+ +    K    R+ QL R       ++P
Sbjct: 110 SDDGSQAGGEKK-------RRLNVEQVRTLEKNFELGNKLEPERKLQLARAL----GLQP 158

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 119
           +Q+ +WFQNRR R K ++      A+ R+L A+   N  L+  N +LQ ++  L
Sbjct: 159 RQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKADNDALLSHNKKLQAEILSL 212


>gi|357486581|ref|XP_003613578.1| Homeobox-leucine zipper protein ATHB-16 [Medicago truncatula]
 gi|355514913|gb|AES96536.1| Homeobox-leucine zipper protein ATHB-16 [Medicago truncatula]
          Length = 324

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 25  GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
           GK  R + EQV+ LE+ +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 86  GKKRRLSSEQVQFLEKSFEVENKLEPDRKVQLAKEL----GLQPRQVAIWFQNRRARFKT 141

Query: 85  R---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           +   K+   L+A    L      L++END+L+++V+ L
Sbjct: 142 KQLEKDYGTLKASFDSLKDDYDNLLQENDKLKEEVNSL 179


>gi|75303608|sp|Q8S7W9.1|HOX21_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX21; AltName:
           Full=HD-ZIP protein HOX21; AltName: Full=Homeodomain
           transcription factor HOX21; AltName: Full=OsHox21
 gi|19071644|gb|AAL84311.1|AC073556_28 putative DNA-binding protein [Oryza sativa Japonica Group]
 gi|108706412|gb|ABF94207.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|108706413|gb|ABF94208.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 366

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 130 KKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 185

Query: 86  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 119
           +      A+ R+L A+   N  L+  N +LQ ++  L
Sbjct: 186 QLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVAL 222


>gi|125574728|gb|EAZ16012.1| hypothetical protein OsJ_31457 [Oryza sativa Japonica Group]
          Length = 351

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R + EQV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 104 KKRRLSVEQVRTLERSFESGNKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTK 159

Query: 86  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 119
           +      A+ R+L A    N  L+  N +L  ++  L
Sbjct: 160 QLEKDFDALRRQLDAARAENDALLSLNSKLHAEIVAL 196


>gi|357440243|ref|XP_003590399.1| Homeobox-leucine zipper protein ATHB-22 [Medicago truncatula]
 gi|355479447|gb|AES60650.1| Homeobox-leucine zipper protein ATHB-22 [Medicago truncatula]
          Length = 232

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 23/153 (15%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIM--DNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIR 58
           MM V      D+     +KM+   +  K  R T EQ+E+LE  + E  K    R+ +L +
Sbjct: 32  MMEVKHQDWTDTMFPEMEKMMKYGNQEKKKRLTSEQMESLESSFQEEIKLDPQRKMKLSK 91

Query: 59  ECPILSNIEPKQIKVWFQNRRCREKQR-----------------KEASRLQAVNRKLTAM 101
           E      ++P+QI +WFQNRR R K +                 KE  +LQ    KL AM
Sbjct: 92  EL----GLQPRQIAIWFQNRRARWKTKQLEHLYDSLRHQFEVVSKEKQQLQDEVMKLKAM 147

Query: 102 NKLLMEENDRLQKQVSQLVYENTFFRQQTQNAA 134
            K       R+Q   +++  E T   + T  AA
Sbjct: 148 LKEQGNSCGRMQGYYTEMSVEETETVESTSEAA 180


>gi|9759299|dbj|BAB09805.1| unnamed protein product [Arabidopsis thaliana]
          Length = 225

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 13/148 (8%)

Query: 3   AVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           + S   + D+ D  G        K +R + +Q   LE  + E    S++  +Q I     
Sbjct: 61  SASRASNEDNDDENG-----STRKKLRLSKDQSAFLEDSFKE---HSTLNPKQKIALAKQ 112

Query: 63  LSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
           L N+ P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V +L   
Sbjct: 113 L-NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTL 167

Query: 123 NTFFRQQTQNAATLATTDTSCESVVTSG 150
            T      Q  AT  T   SCE V TS 
Sbjct: 168 KTSTPFYMQLPATTLTMCPSCERVATSA 195


>gi|449439053|ref|XP_004137302.1| PREDICTED: homeobox-leucine zipper protein ATHB-7-like [Cucumis
           sativus]
          Length = 208

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 6/94 (6%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R++ EQ++ LE +Y+     S +  +Q+I+    L  ++P+QI +WFQN+R R K +++ 
Sbjct: 5   RFSDEQIKTLEAIYYL--TESKLNSRQVIKLATKLG-LQPQQITIWFQNKRARWKSKEKQ 61

Query: 89  SRLQAVNRK---LTAMNKLLMEENDRLQKQVSQL 119
              +++  K   L +  + L EEN+ L  Q+ +L
Sbjct: 62  ENFKSLRAKCDDLASQFETLQEENNSLLSQLQKL 95


>gi|357533773|gb|AET82940.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533775|gb|AET82941.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533777|gb|AET82942.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533779|gb|AET82943.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533781|gb|AET82944.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533783|gb|AET82945.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533785|gb|AET82946.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533787|gb|AET82947.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533789|gb|AET82948.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533791|gb|AET82949.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533793|gb|AET82950.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533795|gb|AET82951.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533797|gb|AET82952.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533799|gb|AET82953.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533801|gb|AET82954.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533805|gb|AET82956.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533807|gb|AET82957.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533809|gb|AET82958.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533811|gb|AET82959.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533813|gb|AET82960.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533815|gb|AET82961.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533817|gb|AET82962.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533819|gb|AET82963.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533821|gb|AET82964.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533823|gb|AET82965.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533825|gb|AET82966.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533827|gb|AET82967.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533829|gb|AET82968.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533831|gb|AET82969.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533833|gb|AET82970.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533835|gb|AET82971.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533837|gb|AET82972.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533839|gb|AET82973.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533841|gb|AET82974.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533843|gb|AET82975.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533845|gb|AET82976.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533847|gb|AET82977.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533849|gb|AET82978.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533851|gb|AET82979.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533853|gb|AET82980.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533857|gb|AET82982.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533859|gb|AET82983.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533861|gb|AET82984.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533863|gb|AET82985.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533865|gb|AET82986.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533867|gb|AET82987.1| hypothetical protein, partial [Pinus contorta var. murrayana]
 gi|357533869|gb|AET82988.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533871|gb|AET82989.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533875|gb|AET82991.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533877|gb|AET82992.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533879|gb|AET82993.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533883|gb|AET82995.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533885|gb|AET82996.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533887|gb|AET82997.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533889|gb|AET82998.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533891|gb|AET82999.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533893|gb|AET83000.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533895|gb|AET83001.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533897|gb|AET83002.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533899|gb|AET83003.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533903|gb|AET83005.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533905|gb|AET83006.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533907|gb|AET83007.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533909|gb|AET83008.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533911|gb|AET83009.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533913|gb|AET83010.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533915|gb|AET83011.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533917|gb|AET83012.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533919|gb|AET83013.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533921|gb|AET83014.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533923|gb|AET83015.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533925|gb|AET83016.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533927|gb|AET83017.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533929|gb|AET83018.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533931|gb|AET83019.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533933|gb|AET83020.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533935|gb|AET83021.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533937|gb|AET83022.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533939|gb|AET83023.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533941|gb|AET83024.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533943|gb|AET83025.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533945|gb|AET83026.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533947|gb|AET83027.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533949|gb|AET83028.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533951|gb|AET83029.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533953|gb|AET83030.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533955|gb|AET83031.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533957|gb|AET83032.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533959|gb|AET83033.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533961|gb|AET83034.1| hypothetical protein, partial [Pinus contorta var. murrayana]
          Length = 146

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 7/109 (6%)

Query: 14  DSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKV 73
           + G    I    K  R T EQV ALE+ +    K    ++ QL +       ++P+QI V
Sbjct: 22  EDGSDDCIHLGEKKRRLTLEQVRALEKNFEMANKLEPEKKMQLAKAL----GLQPRQIAV 77

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNK---LLMEENDRLQKQVSQL 119
           WFQNRR R K ++       +     ++ +    LMEEN+ LQ  + +L
Sbjct: 78  WFQNRRARWKTKQLEKDFNILKHDYDSLKQNYDNLMEENNNLQAMIERL 126


>gi|187609454|sp|A2XD08.2|HOX21_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX21; AltName:
           Full=HD-ZIP protein HOX21; AltName: Full=Homeodomain
           transcription factor HOX21; AltName: Full=OsHox21
          Length = 360

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 124 KKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 179

Query: 86  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 119
           +      A+ R+L A+   N  L+  N +LQ ++  L
Sbjct: 180 QLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVAL 216


>gi|48057626|gb|AAT39949.1| Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]
          Length = 171

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 12/112 (10%)

Query: 8   GSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIE 67
           G  D  D G Q       K  R   EQV+ LE+ +    K    R+ QL R       ++
Sbjct: 72  GEDDLSDDGSQA----GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQ 123

Query: 68  PKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           P+QI +WFQNRR R K ++     + + R+  A+      END LQ Q  +L
Sbjct: 124 PRQIAIWFQNRRARWKTKQLEKDYEVLKRQFDAIKA----ENDALQTQNQKL 171


>gi|357486711|ref|XP_003613643.1| Homeobox-leucine zipper protein [Medicago truncatula]
 gi|355514978|gb|AES96601.1| Homeobox-leucine zipper protein [Medicago truncatula]
          Length = 182

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 12/127 (9%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQL 56
           M+ SSG       +  ++ + D+G     K  R   EQV+ LE+ +    K    R+ QL
Sbjct: 48  MSFSSGIELGEEANIPEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQL 107

Query: 57  IRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQ 113
            R      N++P+Q+ +WFQNRR R K ++       + R+  A+   N  L  +N +LQ
Sbjct: 108 ARAL----NLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQYDAIKLDNDALQAQNQKLQ 163

Query: 114 KQVSQLV 120
            +V   +
Sbjct: 164 AEVCSFL 170


>gi|356531808|ref|XP_003534468.1| PREDICTED: homeobox-leucine zipper protein HAT3-like [Glycine max]
          Length = 229

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 8/94 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R T EQ   LE  + E    +  R+Q L  E     N++P+Q++VWFQNRR R K +
Sbjct: 69  KKLRLTKEQSMVLEETFKEHSTLNPKRKQALAEEL----NLKPRQVEVWFQNRRARTKLK 124

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           +     + + R      + L EEN RL K+V +L
Sbjct: 125 QTEVDCEYLKR----CYENLTEENRRLHKEVQEL 154


>gi|242040187|ref|XP_002467488.1| hypothetical protein SORBIDRAFT_01g029000 [Sorghum bicolor]
 gi|241921342|gb|EER94486.1| hypothetical protein SORBIDRAFT_01g029000 [Sorghum bicolor]
          Length = 346

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 19/119 (15%)

Query: 5   SSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHE----CPKPSSMRRQQLIREC 60
           + GG  D  DSG       + K +R + +Q   LE  + E     PK  +   +QL    
Sbjct: 177 AGGGGSDDEDSGAGG---GSRKKLRLSKDQAAVLEDSFKEHNTLNPKQKAALAKQL---- 229

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
               N++P+Q++VWFQNRR R K ++     + + R      + L EEN RLQ++V++L
Sbjct: 230 ----NLKPRQVEVWFQNRRARTKLKQTEVDCEFLKR----CCETLTEENRRLQREVAEL 280


>gi|108706411|gb|ABF94206.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 356

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 120 KKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 175

Query: 86  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 119
           +      A+ R+L A+   N  L+  N +LQ ++  L
Sbjct: 176 QLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVAL 212


>gi|297734030|emb|CBI15277.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 8/119 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +QV+ LER +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 71  KKRRLTADQVQFLERNFEVENKLEPERKVQLAKDL----GLQPRQVAIWFQNRRARWKTK 126

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
              K+   LQA    L A  + L++E D L+ +V  L+ +    +++ +    ++ TDT
Sbjct: 127 QLEKDFGALQASYNSLKAEYENLLKEKDELKTEVI-LLTDKLLVKEKERGNLEVSNTDT 184


>gi|255940014|ref|XP_002560776.1| Pc16g04210 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585399|emb|CAP93091.1| Pc16g04210 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 720

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 23/150 (15%)

Query: 21  IMDNGKYV------RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           IMD  +Y       R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  W
Sbjct: 57  IMDYDEYTENLSRPRLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANW 112

Query: 75  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENTFFRQQTQN 132
           FQNRR + KQ+K     +    K+T       E   R  + + QL    + +   ++++ 
Sbjct: 113 FQNRRAKAKQQKRQEEFE----KMTKAKAEAEEAARRKSETLDQLSGSRKGSIANEESEK 168

Query: 133 AATLATTDTS-------CESVVTSGQHHLT 155
           +AT   T TS        +S  +  +HH T
Sbjct: 169 SATPKQTPTSTSSGHAKTDSTSSRSKHHKT 198


>gi|356505302|ref|XP_003521430.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Glycine max]
          Length = 218

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 11/131 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T  Q+E LER + E  K    R+ +L RE      ++P+QI VWFQNRR R K +
Sbjct: 58  KKKRLTNNQIELLERSFQEEIKLDPERKMKLSREL----GLQPRQIAVWFQNRRTRWKTK 113

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLAT-TDTSCE 144
           +    L+ +   L     ++  E  +LQ++V +L  +    ++Q     T    T+ S E
Sbjct: 114 Q----LEHLYDVLKHQYDVVSNEKQKLQEEVMKL--KAMLSKEQGFGKQTFGCYTEISGE 167

Query: 145 SVVTSGQHHLT 155
             V S    LT
Sbjct: 168 ETVESTSEGLT 178


>gi|296815888|ref|XP_002848281.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
 gi|238841306|gb|EEQ30968.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
          Length = 712

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 13/148 (8%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +++   ++  WFQNRR +
Sbjct: 61  VENLSRPRLTKEQVEILESQFQAHPKPNSNTKRQLA----LQTSLTLPRVANWFQNRRAK 116

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
            KQ+K     +    K+ A  K +  E    Q+Q S+   E     Q  +N+    T   
Sbjct: 117 AKQQKRQEEFE----KMQAKEKAMAAEGSENQQQQSESSDEQQKSEQDQKNSILTNTRGA 172

Query: 142 SCESVVTSGQHHL-TPQQQHQHPPRDAS 168
           +     + G+H L TP ++   P  DA+
Sbjct: 173 TS----SQGEHGLQTPAEEKPEPRFDAA 196


>gi|388491340|gb|AFK33736.1| unknown [Lotus japonicus]
          Length = 279

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 17/126 (13%)

Query: 3   AVSSGGSRDSRDSGGQKM----IMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRR 53
           + SSG  +  RD G +++    I ++G     K +R T EQ   LE  + +    +  ++
Sbjct: 103 SFSSGKVKRERDHGSEEVDTAEIDEDGATAARKKLRLTKEQSAMLEESFKQHSTLNPKQK 162

Query: 54  QQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQ 113
           Q L R+     N+ P+Q++VWFQNRR R K ++       + +      + L +EN RLQ
Sbjct: 163 QALARQL----NLRPRQVEVWFQNRRARTKLKQTEVDCDFLKK----CCETLTDENMRLQ 214

Query: 114 KQVSQL 119
           K++ +L
Sbjct: 215 KELQEL 220


>gi|256077688|ref|XP_002575133.1| insulinprotein enhancer protein isl [Schistosoma mansoni]
 gi|353229553|emb|CCD75724.1| putative insulinprotein enhancer protein isl [Schistosoma mansoni]
          Length = 409

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 10/81 (12%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           SGGS+ S+D    ++            +Q+  L   Y   P+P ++ ++QL+     +++
Sbjct: 129 SGGSKRSKDQKTTRV------RTVLNEKQLHTLRTCYAANPRPDALMKEQLVE----MTS 178

Query: 66  IEPKQIKVWFQNRRCREKQRK 86
           + P+ I+VWFQN+RC++K+R+
Sbjct: 179 LSPRVIRVWFQNKRCKDKKRQ 199


>gi|350537501|ref|NP_001234296.1| homeodomain leucine zipper protein [Solanum lycopersicum]
 gi|211853240|emb|CAP16664.1| homeodomain leucine zipper protein [Solanum lycopersicum]
          Length = 285

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 66  KKRRLTPEQVHLLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 121

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++  +L++    L +    + ++ND+L+ +V  L+
Sbjct: 122 QLERDYDQLKSSYDSLLSDFDSVRKDNDKLKSEVVSLM 159


>gi|86129716|gb|ABC86567.1| homeodomain-leucine zipper transcription factor TaHDZipI-2
           [Triticum aestivum]
          Length = 333

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 12/118 (10%)

Query: 4   VSSGGS--RDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           V+ GG+   ++ D G Q   +   K  R   EQV  LE+ +    K    R+ QL R   
Sbjct: 97  VTGGGANEEETSDDGSQ---LGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARAL- 152

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 116
               ++P+Q+ +WFQNRR R K ++       + R+  A+   N  L+  N +LQ ++
Sbjct: 153 ---GLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEI 207


>gi|171687871|ref|XP_001908876.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943897|emb|CAP69549.1| unnamed protein product [Podospora anserina S mat+]
          Length = 646

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 5/104 (4%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           GG  M        R   ++VE LER +++ PKP+S  +++L  +      +E  +I  WF
Sbjct: 57  GGMHMSKQTEPKPRLAKDEVELLEREFNKNPKPNSSTKRELAEQM----GVEVPRINNWF 112

Query: 76  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           QNRR +EKQ ++ +  +A   +    ++ + E  D+ Q  V++ 
Sbjct: 113 QNRRAKEKQMRKTAEFEAQQAREKEASE-VKESGDQEQGTVTEF 155


>gi|29028870|gb|AAO64814.1| At5g06710 [Arabidopsis thaliana]
          Length = 336

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 13/148 (8%)

Query: 3   AVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           + S   + D+ D  G        K +R + +Q   L+  + E    S++  +Q I     
Sbjct: 172 SASRASNEDNDDENGS-----TRKKLRLSKDQSAFLKDSFKE---HSTLNPKQKIALAKQ 223

Query: 63  LSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
           L N+ P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V +L   
Sbjct: 224 L-NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTL 278

Query: 123 NTFFRQQTQNAATLATTDTSCESVVTSG 150
            T      Q  AT  T   SCE V TS 
Sbjct: 279 KTSTPFYMQLPATTLTMCPSCERVATSA 306


>gi|242036775|ref|XP_002465782.1| hypothetical protein SORBIDRAFT_01g045740 [Sorghum bicolor]
 gi|241919636|gb|EER92780.1| hypothetical protein SORBIDRAFT_01g045740 [Sorghum bicolor]
          Length = 355

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 124 KKRRLNVEQVRTLEKNFELGNKLEPERKLQLARAL----GLQPRQVAIWFQNRRARWKTK 179

Query: 86  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 116
           +      A+ R+L A+   N  L+  N +LQ ++
Sbjct: 180 QLEKDYDALKRQLDAVKADNDALLSHNKKLQAEI 213


>gi|302398829|gb|ADL36709.1| HD domain class transcription factor [Malus x domestica]
          Length = 324

 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 7/112 (6%)

Query: 11  DSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQ 70
           D+ D    + +   GK  R T +QV+ LE+ +    K    R+  L ++      ++P+Q
Sbjct: 74  DNGDDDLDEYLHQPGKKRRLTADQVQFLEKSFDVENKLEPERKVLLAKDL----GLQPRQ 129

Query: 71  IKVWFQNRRCREKQR---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           + +WFQNRR R K +   K+   LQA    L A  + L +END+L+ +V+ L
Sbjct: 130 VAIWFQNRRARWKTKQLEKDYEELQANYNNLKANCESLSKENDKLKAEVTVL 181


>gi|443711321|gb|ELU05149.1| hypothetical protein CAPTEDRAFT_228137 [Capitella teleta]
          Length = 506

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 5/61 (8%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 89
           T +Q+EAL+R Y+E PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 280 TAKQLEALKRAYNESPKPARHVREQLSAE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 335

Query: 90  R 90
           R
Sbjct: 336 R 336


>gi|410988723|ref|XP_004000627.1| PREDICTED: stAR-related lipid transfer protein 8 [Felis catus]
          Length = 1014

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 84/192 (43%), Gaps = 20/192 (10%)

Query: 165 RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
           R A  AG+ LS+  EE++ E L  A      W+ MPG  P    +     S G      +
Sbjct: 798 RQAQAAGMSLSLYMEESVQELLRDAAERFKGWMSMPG--PQHTELACRKASDGHPLRVWK 855

Query: 223 ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
               V   P  V   +L++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 856 VSTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPH 908

Query: 281 -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
             RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 909 PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRAMMLTSQYLMEPCGLG 963

Query: 339 GSIIHIVDHMDL 350
            S +  +   DL
Sbjct: 964 RSRLTHICRADL 975


>gi|444707480|gb|ELW48754.1| StAR-related lipid transfer protein 8 [Tupaia chinensis]
          Length = 818

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 86/192 (44%), Gaps = 18/192 (9%)

Query: 165 RDASPAGL-LSIA-EETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
           R A  AG+ LS+A EE++ E L  A   +  W+ +PG +    +   V  + G       
Sbjct: 600 RQARAAGMSLSLAMEESIQELLCNAAECSKGWMSVPGPQHMELACRKVGTALGTRWAPPA 659

Query: 223 ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
               V   P  V   IL++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 660 HMTEVAAPPAVVLHRILRERALWDEDLLWAQVLEALMPG----VELYH---YVTDSMAPH 712

Query: 281 -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
             RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 713 PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRALMLTSQYLMEPCGLG 767

Query: 339 GSIIHIVDHMDL 350
            S +  +   DL
Sbjct: 768 RSRLTHICRADL 779


>gi|449519336|ref|XP_004166691.1| PREDICTED: homeobox-leucine zipper protein HAT14-like, partial
           [Cucumis sativus]
          Length = 372

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 8/119 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++Q L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 213 KKLRLSKEQSAFLEESFKEHNTLNPKQKQALAKQL----NLRPRQVEVWFQNRRARTKLK 268

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCE 144
           +     + + R      + L EEN RLQK++ +L    T      Q  AT  T   SCE
Sbjct: 269 QTEVDCEYLKR----CCETLTEENRRLQKELQELRALKTTNSLYMQLPATTLTMCPSCE 323


>gi|356524118|ref|XP_003530679.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Glycine max]
          Length = 320

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 14/131 (10%)

Query: 25  GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
           GK  R T +QV+ LE  +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 80  GKKRRLTSKQVQFLESNFEVENKLEPERKVQLAKEL----GMQPRQVAIWFQNRRARFKT 135

Query: 85  R---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 141
           +   K+   L+A    L      L++E+D+L+++V+ L        Q+ QN       DT
Sbjct: 136 KQLEKDYGVLKASYDVLKRDYDNLLQESDKLKEEVNSLKTRLIPREQEEQNL-----DDT 190

Query: 142 SCESVVTSGQH 152
           SC++V  + QH
Sbjct: 191 SCDAV--NSQH 199


>gi|4262185|gb|AAD14502.1| putative DNA-binding protein [Arabidopsis thaliana]
          Length = 282

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 12/111 (10%)

Query: 14  DSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           D  G +   D+G     K  R   EQ++ALE+ +    K  S R+ +L R       ++P
Sbjct: 81  DMNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARAL----GLQP 136

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 116
           +QI +WFQNRR R K ++       + R+  ++   N++L  +N +LQ QV
Sbjct: 137 RQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQV 187


>gi|255540907|ref|XP_002511518.1| homeobox protein, putative [Ricinus communis]
 gi|223550633|gb|EEF52120.1| homeobox protein, putative [Ricinus communis]
          Length = 319

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +QV+ LE+ +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 91  KKRRLTVDQVQFLEKSFEVENKLEPERKLQLAKDL----GLQPRQVAIWFQNRRARWKTK 146

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              K+   LQ     L A    L++E DRL+ +V+ L 
Sbjct: 147 QMEKDYDVLQTSYNSLKADYDALLQEKDRLKAEVNLLT 184


>gi|357533873|gb|AET82990.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533881|gb|AET82994.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
          Length = 146

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 14  DSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKV 73
           + G    I    K  R T EQV ALE  +    K    ++ QL +       ++P+QI V
Sbjct: 22  EDGSDDCIHLGEKKRRLTLEQVRALEENFEMANKLEPEKKMQLAKAL----GLQPRQIAV 77

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNK---LLMEENDRLQKQVSQL 119
           WFQNRR R K ++       +     ++ +    LMEEN+ LQ  + +L
Sbjct: 78  WFQNRRARWKTKQLEKDFNILKHDYDSLKQNYDNLMEENNNLQAMIERL 126


>gi|356574388|ref|XP_003555330.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 729

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 83/414 (20%), Positives = 169/414 (40%), Gaps = 84/414 (20%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSW---YRDCRSVEVVN-VLPTGSS----GTIELLYMQ 271
           ++R   +V +   ++ E+L D   W   +    S  V + VL TG +    G  +++  +
Sbjct: 303 SSRQTAIVIMHHMKLVEMLMDVNQWSNMFCGIVSRAVTHEVLSTGETIRYDGACQVMSAE 362

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
              P+ L P RD + +R+    +  S  V + S+++ + G          +    PSG +
Sbjct: 363 FQVPSPLVPTRDNYFIRFCKKHQGQSWAVVDFSMDHLRPGA-------ITKIRRRPSGCI 415

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAAL-----RHLRQISQ 386
           I+    G S +  V+H++++   V  + + L +S+     K  +AA+     R    ++ 
Sbjct: 416 IQELPNGYSKVIWVEHVEVDDSEVHNLYKNLVDSTLAFGAKRWVAAIDRTCERLASAMAT 475

Query: 387 EVSQPS---VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNS 443
            + Q +   +T    R + ++ L++R+   F   +   T   W+ L S G++DV V    
Sbjct: 476 NIPQGALCVITSHESRKSMMK-LAERMVLSFCTGVGASTANAWTPLPS-GLEDVRVMTRK 533

Query: 444 SPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDA 501
           S               P     ++ + A+ L   VP   +  FLR    R++W     D 
Sbjct: 534 SVDD------------PGRPPGIVLSAATSLWLPVPARRVFEFLRSENTRNQW-----DI 576

Query: 502 YSAAAVKAGPCSLPVPRAGNFGGQV--ILPLAHTIEHEEFLEVIKLENMAHYREDMIMPS 559
            S                   G QV  +  +A+  +H   + ++++      + +M++  
Sbjct: 577 LST------------------GAQVNELAHIANGRDHGNCVSLLRVNTQNVGQNNMLILQ 618

Query: 560 DIFLLQLCSGVDENAVGNCAELVFAPIDASF---------SDDAPIIPSGFRII 604
           + F+         +A G+   +++APID +           D   ++PSGF ++
Sbjct: 619 ESFI---------DATGSF--VIYAPIDVAAINVVLGGGNPDYVALLPSGFAVL 661



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 22/100 (22%)

Query: 34  QVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQA 93
           Q+  +E  +  CP P   +R+ L RE      +EP QIK WFQN+R + K ++E      
Sbjct: 56  QISEMESFFKGCPHPDEKQRKALGREL----GLEPLQIKFWFQNKRTQVKTQQERYE--- 108

Query: 94  VNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA 133
                   N LL  END+L+        EN  +R    NA
Sbjct: 109 --------NNLLRVENDKLRA-------ENRRYRNALANA 133


>gi|259013450|ref|NP_001158468.1| ISL LIM homeobox 1 [Saccoglossus kowalevskii]
 gi|197320557|gb|ACH68440.1| islet homeobox protein [Saccoglossus kowalevskii]
          Length = 383

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 40/59 (67%), Gaps = 4/59 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRL 91
           +Q+  L   Y+  P+P ++ ++QL      ++N+ P+ I+VWFQN+RC++K+R +A +L
Sbjct: 194 KQLHTLRTCYNANPRPDALMKEQLTE----MTNLSPRVIRVWFQNKRCKDKKRSQAMKL 248


>gi|349379|gb|AAA63765.1| HAHB-1 [Helianthus annuus]
          Length = 313

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 10/116 (8%)

Query: 7   GGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNI 66
            G  +  D G Q  ++   K  R   EQV+ L+R +    K    R+ QL R       +
Sbjct: 75  NGEDELSDDGSQ--LLAGEKKRRLNMEQVKTLQRNFELGNKLEPERKMQLARAL----GL 128

Query: 67  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
           +P+QI +WFQNRR R K ++      A+ R+  A+      END LQ Q  +L  E
Sbjct: 129 QPRQIAIWFQNRRARWKTKQLEKDYDALKRQFEAVKA----ENDSLQSQNHKLHAE 180


>gi|357483327|ref|XP_003611950.1| Homeodomain-leucine zipper protein [Medicago truncatula]
 gi|355513285|gb|AES94908.1| Homeodomain-leucine zipper protein [Medicago truncatula]
          Length = 207

 Score = 52.8 bits (125), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 7/122 (5%)

Query: 10  RDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           R  ++ GG+    D  K  + + EQV  LE  +    K  S ++ +L  E      ++P+
Sbjct: 37  RSKKNKGGENSANDMNKKRKLSDEQVNILEENFGNEHKLESEKKDRLAMEL----GLDPR 92

Query: 70  QIKVWFQNRRCREKQRKEASRLQAV--NRKLTAMNKLLMEEND-RLQKQVSQLVYENTFF 126
           Q+ VWFQNRR R K +K      ++  N + T + K L+E    +L++Q+S+   E    
Sbjct: 93  QVAVWFQNRRARWKNKKLEEEYFSLKKNHESTILEKCLLETKMLKLREQLSEAEKEIQRL 152

Query: 127 RQ 128
           R+
Sbjct: 153 RE 154


>gi|209171589|gb|ACI42915.1| tendril-less [Vicia narbonensis]
          Length = 237

 Score = 52.8 bits (125), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 15/89 (16%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 90
           T  QV+ALER +HE  K    R+ +L  E      ++P+Q+ VWFQNRR R K       
Sbjct: 78  TSNQVDALERSFHEEIKLDPERKMKLSAEL----GLQPRQVAVWFQNRRTRWK------- 126

Query: 91  LQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
                ++L     +L +EN +LQ +V +L
Sbjct: 127 ----TKQLEQSYDVLKQENQKLQDEVMEL 151


>gi|258570165|ref|XP_002543886.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237904156|gb|EEP78557.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 697

 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 7/76 (9%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +N+   ++  WFQNRR +
Sbjct: 70  VENLSRPRLTKEQVETLEAQFQAQPKPTSNIKRQLA----VQTNLTLPRVANWFQNRRAK 125

Query: 82  EKQRK---EASRLQAV 94
           EKQ+K   E  R+QA+
Sbjct: 126 EKQQKRQEEFKRMQAM 141


>gi|405977546|gb|EKC41989.1| LIM/homeobox protein Lhx3 [Crassostrea gigas]
          Length = 432

 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 5/61 (8%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 89
           T +Q+EAL+R Y+E PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 221 TAKQLEALKRAYNESPKPARHVREQLSAE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 276

Query: 90  R 90
           R
Sbjct: 277 R 277


>gi|255558238|ref|XP_002520146.1| homeobox protein, putative [Ricinus communis]
 gi|223540638|gb|EEF42201.1| homeobox protein, putative [Ricinus communis]
          Length = 305

 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 7/98 (7%)

Query: 25  GKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
            K  R T  QV+ LER +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 81  AKKRRLTATQVQFLERNFEVENKLEPERKIQLAKEL----GLQPRQVAIWFQNRRARFKN 136

Query: 85  R---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           +   K+   L+A   KL A    L++EN+ L+ +   L
Sbjct: 137 KQLEKDYDSLKASYDKLKADYDNLLKENENLKNEFVSL 174


>gi|209171587|gb|ACI42914.1| tendril-less [Lens culinaris]
          Length = 237

 Score = 52.4 bits (124), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 19/132 (14%)

Query: 34  QVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQA 93
           QV+ALER ++E  K    R+ +L  E      ++P+Q+ VWFQNRR R K          
Sbjct: 81  QVDALERSFNEEIKLDPERKMKLSAEL----GLQPRQVAVWFQNRRTRWK---------- 126

Query: 94  VNRKLTAMNKLLMEENDRLQKQVSQL---VYENTFFRQQTQNAATLATTDTSCESVVTSG 150
             ++L     +L +EN +LQ++V +L   + E + FR QT    T+ +     E     G
Sbjct: 127 -TKQLEHSYDVLKQENQKLQEEVIELKEKLKEKSDFRTQTFGNETVESPLEGLEWREIEG 185

Query: 151 QHHLTPQQQHQH 162
            +   P   +QH
Sbjct: 186 -YEPYPNSHNQH 196


>gi|224090483|ref|XP_002308994.1| predicted protein [Populus trichocarpa]
 gi|222854970|gb|EEE92517.1| predicted protein [Populus trichocarpa]
          Length = 214

 Score = 52.4 bits (124), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 12/133 (9%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R T +Q   LE  +   P  +  ++  L  +     N++P+Q++VWFQNRR R K +
Sbjct: 90  KKLRLTKDQSSYLEESFRRHPTLNPAKKHALAEQL----NLKPRQVEVWFQNRRARTKLK 145

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT--FFRQQTQNAATLATTDT-- 141
           +  +  + + +   +++     EN RL++++ +L  + T       +Q A  L T     
Sbjct: 146 QTEADCELLKKCCESLSN----ENRRLKRELQELRSQKTGRSSSSHSQLAKDLGTITKCP 201

Query: 142 SCESVVTSGQHHL 154
           SCE   T+ Q+ +
Sbjct: 202 SCEESTTTDQNKM 214


>gi|195607828|gb|ACG25744.1| DNA binding protein [Zea mays]
          Length = 234

 Score = 52.4 bits (124), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 7/178 (3%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQVE LE  + E  K  + R+  L  E      ++PKQ+ VWFQNRR R K +
Sbjct: 60  KKRRLTDEQVEMLELSFREERKLETGRKVHLAAEL----GLDPKQVAVWFQNRRARHKSK 115

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTS 142
              +E ++L+  +         L  E  RL+ ++     E T FR    +A +    D  
Sbjct: 116 LLEEEFAKLKQAHDAAILHKCHLENEVMRLKDKLVLAEEELTRFRSAGNHAVSGDGGDVM 175

Query: 143 CESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
             +V +            Q P         L   +       + A  + VEW  + G+
Sbjct: 176 ARAVCSGSPSSSFSTGTCQQPGGGGGGGDHLGDDDLLYVPDYAYADSSVVEWFSLYGL 233


>gi|255588212|ref|XP_002534537.1| Homeobox-leucine zipper protein HAT14, putative [Ricinus communis]
 gi|223525092|gb|EEF27847.1| Homeobox-leucine zipper protein HAT14, putative [Ricinus communis]
          Length = 368

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 18/144 (12%)

Query: 7   GGSRDSRDSGGQKMIMDNG---KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPIL 63
           G SR S D        +NG   K +R + EQ   LE  + E    +  ++  L ++    
Sbjct: 171 GSSRASDDD-------ENGLTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQL--- 220

Query: 64  SNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
            N+ P+Q++VWFQNRR R K ++     + + R      ++L EEN RLQK++ +L    
Sbjct: 221 -NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR----CCEMLTEENRRLQKELQELRALK 275

Query: 124 TFFRQQTQNAATLATTDTSCESVV 147
           T      Q  AT  T   SCE V 
Sbjct: 276 TSQPFYMQLPATTLTMCPSCERVA 299


>gi|113205174|gb|AAT40518.2| Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]
          Length = 307

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 16/144 (11%)

Query: 8   GSRDSRDSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           G+    ++ G+  + D+G     K  R   EQV+ LE+ +    K    R+ QL R    
Sbjct: 56  GNNACEENHGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL-- 113

Query: 63  LSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
              ++P+QI +WFQNRR R K ++     + + R+  A+      END LQ Q  +L  E
Sbjct: 114 --GLQPRQIAIWFQNRRARWKTKQLEKDYEVLKRQFDAIKA----ENDALQTQNQKLHAE 167

Query: 123 NTFFRQQTQNAATL---ATTDTSC 143
               + + Q   ++     T+ SC
Sbjct: 168 IMSLKNREQPTESINLNKETEGSC 191


>gi|48209882|gb|AAT40488.1| putative DNA-binding protein [Solanum demissum]
          Length = 304

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 16/144 (11%)

Query: 8   GSRDSRDSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           G+    ++ G+  + D+G     K  R   EQV+ LE+ +    K    R+ QL R    
Sbjct: 56  GNNACEENHGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL-- 113

Query: 63  LSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
              ++P+QI +WFQNRR R K ++     + + R+  A    +  END LQ Q  +L  E
Sbjct: 114 --GLQPRQIAIWFQNRRARWKTKQLEKDYEVLKRQFDA----IKAENDALQTQNQKLHAE 167

Query: 123 NTFFRQQTQNAATL---ATTDTSC 143
               + + Q   ++     T+ SC
Sbjct: 168 IMSLKNREQPTESINLNKETEGSC 191


>gi|449461919|ref|XP_004148689.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Cucumis
           sativus]
          Length = 305

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 13/114 (11%)

Query: 14  DSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           D  G + + D+G     K  R   EQV+ALE+ +    K    R+ QL +       ++P
Sbjct: 66  DVNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFEVGNKLEPERKMQLAKAL----GLQP 121

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
           +QI +WFQNRR R K ++     + + ++  A    L  +ND LQ Q ++L  E
Sbjct: 122 RQIAIWFQNRRARWKTKQLERDYEVLKKQFEA----LKADNDVLQAQNTKLHAE 171


>gi|226529373|ref|NP_001140916.1| uncharacterized protein LOC100272993 [Zea mays]
 gi|194701760|gb|ACF84964.1| unknown [Zea mays]
          Length = 234

 Score = 52.4 bits (124), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 7/178 (3%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQVE LE  + E  K  + R+  L  E      ++PKQ+ VWFQNRR R K +
Sbjct: 60  KKRRLTDEQVEMLELSFREERKLETGRKVHLAAEL----GLDPKQVAVWFQNRRARHKSK 115

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTS 142
              +E ++L+  +         L  E  RL+ ++     E T FR    +A +    D  
Sbjct: 116 LLEEEFAKLKQAHDAAILHKCHLENEVMRLKDKLVLAEEELTRFRSAGNHAVSGDGGDVM 175

Query: 143 CESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 200
             +V +            Q P         L   +       + A  + VEW  + G+
Sbjct: 176 ARAVCSGSPSSSFSTGTCQQPGGGGGGGDHLGDDDLLYVPDYAYADSSVVEWFSLYGL 233


>gi|549885|gb|AAA56900.1| homeobox protein, partial [Arabidopsis thaliana]
          Length = 165

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 13/148 (8%)

Query: 3   AVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           + S   + D+ D  G        K +R + +Q   LE  + E    S++  +Q I     
Sbjct: 1   SASRASNEDNDDENG-----STRKKLRLSKDQSAFLEDSFKE---HSTLNPKQKIALAKQ 52

Query: 63  LSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
           L N+ P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V +L   
Sbjct: 53  L-NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTL 107

Query: 123 NTFFRQQTQNAATLATTDTSCESVVTSG 150
            T      Q  AT  T   SCE V TS 
Sbjct: 108 KTSTPFYMQLPATTLTMCPSCERVATSA 135


>gi|76577747|gb|ABA54144.1| homeobox-leucine zipper-like protein [Picea glauca]
          Length = 309

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV ALE+ +    K    ++ QL +       ++P+QI VWFQNRR R K +
Sbjct: 87  KKRRLTLEQVRALEKNFEMANKLEPEKKMQLAKAL----GLQPRQIAVWFQNRRARWKTK 142

Query: 86  KEASRLQAVNRKLTAMNK---LLMEENDRLQKQVSQL 119
           +       + +   A+ +    LMEEN+ LQ  + ++
Sbjct: 143 QLEKDFNVLKQDYDALKQDYDNLMEENNNLQAMIERM 179


>gi|356557110|ref|XP_003546861.1| PREDICTED: homeobox-leucine zipper protein HOX27-like [Glycine max]
          Length = 384

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 16/149 (10%)

Query: 4   VSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPIL 63
            SS  S D  ++ G     +  K +R + EQ   LE  + E    +  ++  L ++    
Sbjct: 183 TSSRASDDDDNNNGSGG--NTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQL--- 237

Query: 64  SNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ---LV 120
            N++P+Q++VWFQNRR R K ++     + + R      + L EEN RL K++ +   L 
Sbjct: 238 -NLQPRQVEVWFQNRRARTKLKQTEVDCEYLKRCC----ETLTEENRRLHKELQELRALK 292

Query: 121 YENTFFRQQTQNAATLATTDTSCESVVTS 149
             N F+ Q     AT  T   SCE V T+
Sbjct: 293 TSNPFYMQL---PATTLTMCPSCERVATN 318


>gi|307715372|gb|ADN88093.1| homeodomain-leucine zipper protein HD2 [Gossypium hirsutum]
          Length = 300

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 18/144 (12%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + +Q   LE  + E    +  ++  L ++      + P+Q++VWFQNRR R K +
Sbjct: 141 KKLRLSKDQSAILEESFKENNTLNPKQKMALAKQL----GLRPRQVEVWFQNRRARTKLK 196

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ---LVYENTFFRQQTQNAATLATTDTS 142
           +     + + R        L EEN RLQK+V +   L     F+ Q T    T  T   S
Sbjct: 197 QTEVDCEFLKRCCEN----LTEENRRLQKEVQELRALKLSPQFYMQMT--PPTTLTMCPS 250

Query: 143 CE-----SVVTSGQHHLTPQQQHQ 161
           CE     S V    HH  PQ  H+
Sbjct: 251 CERVGASSTVDPRSHHQLPQNHHR 274


>gi|121489795|emb|CAK18868.1| type II homeodomain-leucine zipper protein precursor [Phillyrea
           latifolia]
          Length = 106

 Score = 52.0 bits (123), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 4/85 (4%)

Query: 65  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT 124
           N+ P+Q++VWFQNRR R K ++     + + R      + L EEN RLQK++ +L    T
Sbjct: 2   NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLQKELQELRALKT 57

Query: 125 FFRQQTQNAATLATTDTSCESVVTS 149
                 Q  AT  T   SCE V T+
Sbjct: 58  SQPFYMQLPATTLTMCPSCERVATT 82


>gi|242049134|ref|XP_002462311.1| hypothetical protein SORBIDRAFT_02g023650 [Sorghum bicolor]
 gi|241925688|gb|EER98832.1| hypothetical protein SORBIDRAFT_02g023650 [Sorghum bicolor]
          Length = 317

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 8/96 (8%)

Query: 29  RYTPEQVEALERLYHECP-KPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR-- 85
           R T EQV  LE  + E   K    R+ +L R       I P+Q+ VWFQNRR R + +  
Sbjct: 103 RLTAEQVRELELSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWRTKQL 158

Query: 86  -KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
            ++  RL+A +  L A    L+ +NDRL+ QV  L 
Sbjct: 159 EQDFDRLRAAHDDLLAGRDALLADNDRLRSQVITLT 194


>gi|125585080|gb|EAZ25744.1| hypothetical protein OsJ_09581 [Oryza sativa Japonica Group]
          Length = 390

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 7/93 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 130 KKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 185

Query: 86  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQ 115
           +      A+ R+L A+   N  L+  N +LQ +
Sbjct: 186 QLEKDYDALKRQLDAVKAENDALLNHNKKLQAE 218


>gi|356568606|ref|XP_003552501.1| PREDICTED: homeobox-leucine zipper protein HAT3-like [Glycine max]
          Length = 289

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R T EQ   LE  + E    +  R+Q L  E     N++P+Q++VWFQNRR R K +
Sbjct: 128 KKLRLTKEQSMVLEETFKEHNTLNPKRKQALAEEL----NLKPRQVEVWFQNRRARTKLK 183

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           +     +     L    + L EEN RL K+V +L
Sbjct: 184 QTEVDCEY----LKKCCENLTEENRRLHKEVQEL 213


>gi|357509981|ref|XP_003625279.1| Homeobox-leucine zipper protein HOX27 [Medicago truncatula]
 gi|355500294|gb|AES81497.1| Homeobox-leucine zipper protein HOX27 [Medicago truncatula]
          Length = 296

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 14/142 (9%)

Query: 12  SRDSGGQKMIMD---NG---KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           SR+ G  +   D   NG   K +R + EQ   LE  + E    +  ++  L ++     N
Sbjct: 140 SREEGADRNTSDDEENGSTRKKLRLSKEQSAFLEDSFKEHTTLNPKQKLALAKQL----N 195

Query: 66  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTF 125
           + P+Q++VWFQNRR R K ++     + + R      + L EEN RLQK++ +L    T 
Sbjct: 196 LRPRQVEVWFQNRRARTKSKQTEVDCEYLKR----CCETLTEENKRLQKELQELRALKTS 251

Query: 126 FRQQTQNAATLATTDTSCESVV 147
                Q  AT  T   SCE V 
Sbjct: 252 QPFYMQLPATTLTMCPSCERVA 273


>gi|354492531|ref|XP_003508401.1| PREDICTED: rhox homeobox family member 2-like [Cricetulus griseus]
          Length = 179

 Score = 52.0 bits (123), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 4/60 (6%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           ++TPEQV  L+R++ E   P +++R++L      L N+E   +KVWF NRR + ++ ++A
Sbjct: 75  KFTPEQVVELDRVFEETHYPDALKRKKLAE----LINVEECTVKVWFNNRRAKLRKHQKA 130


>gi|115481926|ref|NP_001064556.1| Os10g0404900 [Oryza sativa Japonica Group]
 gi|75165783|sp|Q94GL5.1|HOX23_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX23; AltName:
           Full=HD-ZIP protein HOX23; AltName: Full=Homeodomain
           transcription factor HOX23; AltName: Full=OsHox23
 gi|187609446|sp|A2Z734.1|HOX23_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX23; AltName:
           Full=HD-ZIP protein HOX23; AltName: Full=Homeodomain
           transcription factor HOX23; AltName: Full=OsHox23
 gi|15217320|gb|AAK92664.1|AC090487_6 Putative homeotic protein [Oryza sativa Japonica Group]
 gi|31431979|gb|AAP53678.1| HAHB-1, putative [Oryza sativa Japonica Group]
 gi|113639165|dbj|BAF26470.1| Os10g0404900 [Oryza sativa Japonica Group]
 gi|125531853|gb|EAY78418.1| hypothetical protein OsI_33507 [Oryza sativa Indica Group]
          Length = 351

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R + EQV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 104 KKRRLSVEQVRTLERSFESGNKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTK 159

Query: 86  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 119
           +      A+ R+L A    N  L+  N +L  ++  L
Sbjct: 160 QLEKDFDALRRQLDAARAENDALLSLNSKLHAEIVAL 196


>gi|449505859|ref|XP_004162588.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Cucumis
           sativus]
          Length = 305

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 13/114 (11%)

Query: 14  DSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           D  G + + D+G     K  R   EQV+ALE+ +    K    R+ QL +       ++P
Sbjct: 66  DVNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFEVGNKLEPERKMQLAKAL----GLQP 121

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
           +QI +WFQNRR R K ++     + + ++  A    L  +ND LQ Q ++L  E
Sbjct: 122 RQIAIWFQNRRARWKTKQLERDYEVLKKQFEA----LKADNDVLQAQNTKLHAE 171


>gi|156523146|ref|NP_001095987.1| stAR-related lipid transfer protein 8 [Bos taurus]
 gi|154425917|gb|AAI51397.1| STARD8 protein [Bos taurus]
          Length = 1018

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 84/192 (43%), Gaps = 20/192 (10%)

Query: 165 RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
           R A  AG+ LS+  EE++ E L  A      W+ MPG  P    +       G      +
Sbjct: 802 RQARAAGVSLSLYMEESIQELLHNAAERFKGWMSMPG--PQHTELACKKAPDGHPLRVWK 859

Query: 223 ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
           A   V   P  V   +L++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 860 ASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPH 912

Query: 281 -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
             RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 913 PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRALMLTSQYLMEPCGLG 967

Query: 339 GSIIHIVDHMDL 350
            S +  +   DL
Sbjct: 968 RSRLTHICRADL 979


>gi|440903217|gb|ELR53906.1| StAR-related lipid transfer protein 8, partial [Bos grunniens mutus]
          Length = 1072

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 84/192 (43%), Gaps = 20/192 (10%)

Query: 165  RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
            R A  AG+ LS+  EE++ E L  A      W+ MPG  P    +       G      +
Sbjct: 856  RQARAAGVSLSLYMEESIQELLHNAAERFKGWMSMPG--PQHTELACKKAPDGHPLRVWK 913

Query: 223  ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
            A   V   P  V   +L++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 914  ASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPH 966

Query: 281  -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
              RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 967  PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRALMLTSQYLMEPCGLG 1021

Query: 339  GSIIHIVDHMDL 350
             S +  +   DL
Sbjct: 1022 RSRLTHICRADL 1033


>gi|388520429|gb|AFK48276.1| unknown [Medicago truncatula]
          Length = 218

 Score = 52.0 bits (123), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 7/103 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R + EQV+ALE+ +    K    R+ QL +       ++P+Q+ +WFQNRR R K +
Sbjct: 96  KKKRLSLEQVKALEKSFEIGNKLEPERKMQLAKAL----GLQPRQVAIWFQNRRARWKTK 151

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTF 125
              KE   L+     L A N  L  +N++L  ++  L   + F
Sbjct: 152 QLEKEYEVLKKQFDSLKADNNTLKAQNNKLHAELQTLKKRDCF 194


>gi|297850974|ref|XP_002893368.1| ATHB23 [Arabidopsis lyrata subsp. lyrata]
 gi|297339210|gb|EFH69627.1| ATHB23 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 12/111 (10%)

Query: 14  DSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           D  G +   D+G     K  R   EQ++ALE+ +    K  S R+ +L R       ++P
Sbjct: 54  DMNGDEEYSDDGSKMGEKKRRLNMEQLKALEKNFELGNKLESDRKLELARAL----GLQP 109

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 116
           +QI +WFQNRR R K ++       + R+  ++   N++L  +N +LQ QV
Sbjct: 110 RQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRNENEVLQTQNQKLQAQV 160


>gi|195114382|ref|XP_002001746.1| GI17017 [Drosophila mojavensis]
 gi|193912321|gb|EDW11188.1| GI17017 [Drosophila mojavensis]
          Length = 533

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 15/95 (15%)

Query: 14  DSGGQKMIMD-------NGKYVR----YTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           +SG  K I D       +GK  R       +Q+  L   Y+  P+P ++ ++QL+     
Sbjct: 229 ESGSHKSIRDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE---- 284

Query: 63  LSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRK 97
           ++ + P+ I+VWFQN+RC++K++    +LQ    K
Sbjct: 285 MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQMQQEK 319


>gi|148682250|gb|EDL14197.1| START domain containing 8 [Mus musculus]
          Length = 1017

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 83/192 (43%), Gaps = 22/192 (11%)

Query: 165 RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
           R A  AG+ LS+  EE++ E L  A      W  +PG    P    +     G      +
Sbjct: 803 RQAQAAGVSLSLYMEESVQELLRDAAERFKGWTNVPG----PQHTELACRKMGTRFECWK 858

Query: 223 ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
           A   V   P  V   +L++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 859 ASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPH 911

Query: 281 -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
             RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 912 PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRALMLTSQYLMEPCGLG 966

Query: 339 GSIIHIVDHMDL 350
            S +  +   DL
Sbjct: 967 RSRLTHICRADL 978


>gi|125542579|gb|EAY88718.1| hypothetical protein OsI_10193 [Oryza sativa Indica Group]
          Length = 384

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 7/93 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 124 KKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 179

Query: 86  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQ 115
           +      A+ R+L A+   N  L+  N +LQ +
Sbjct: 180 QLEKDYDALKRQLDAVKAENDALLNHNKKLQAE 212


>gi|17136568|ref|NP_476775.1| tailup, isoform A [Drosophila melanogaster]
 gi|195580000|ref|XP_002079844.1| GD21801 [Drosophila simulans]
 gi|7298500|gb|AAF53720.1| tailup, isoform A [Drosophila melanogaster]
 gi|194191853|gb|EDX05429.1| GD21801 [Drosophila simulans]
          Length = 534

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 15/95 (15%)

Query: 14  DSGGQKMIMD-------NGKYVR----YTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           +SG  K I D       +GK  R       +Q+  L   Y+  P+P ++ ++QL+     
Sbjct: 221 ESGSHKSIRDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE---- 276

Query: 63  LSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRK 97
           ++++ P+ I+VWFQN+RC++K++    +LQ    K
Sbjct: 277 MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQMQQEK 311


>gi|388493514|gb|AFK34823.1| unknown [Lotus japonicus]
          Length = 147

 Score = 51.6 bits (122), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 85
           R++ EQ+ +LE ++    K    ++ QL ++      ++P+Q+ +WFQNRR R K +   
Sbjct: 41  RFSDEQIRSLECIFESESKLEPRKKIQLAKDL----GLQPRQVAIWFQNRRARWKSKRME 96

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
           KE  +L+     L +  + L EE + LQ ++ +L Y
Sbjct: 97  KEYRKLKDEYDNLASRFESLKEEKESLQLELQKLSY 132


>gi|195344936|ref|XP_002039032.1| GM17053 [Drosophila sechellia]
 gi|194134162|gb|EDW55678.1| GM17053 [Drosophila sechellia]
          Length = 534

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 15/95 (15%)

Query: 14  DSGGQKMIMD-------NGKYVR----YTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           +SG  K I D       +GK  R       +Q+  L   Y+  P+P ++ ++QL+     
Sbjct: 221 ESGSHKSIRDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE---- 276

Query: 63  LSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRK 97
           ++++ P+ I+VWFQN+RC++K++    +LQ    K
Sbjct: 277 MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQMQQEK 311


>gi|116787413|gb|ABK24498.1| unknown [Picea sitchensis]
          Length = 309

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV ALE+ +    K    ++ QL +       ++P+QI VWFQNRR R K +
Sbjct: 87  KKRRLTLEQVRALEKNFEIANKLEPEKKMQLAKAL----GLQPRQIAVWFQNRRARWKTK 142

Query: 86  KEASRLQAVNRKLTAMNK---LLMEENDRLQKQVSQL 119
           +       + +   A+ +    LMEEN+ LQ  + ++
Sbjct: 143 QLEKDFNVLKQDYDALKQDYDNLMEENNNLQAMIERM 179


>gi|70995333|ref|XP_752424.1| homeobox  transcription factor [Aspergillus fumigatus Af293]
 gi|66850059|gb|EAL90386.1| homeobox transcription factor, putative [Aspergillus fumigatus
           Af293]
 gi|159131178|gb|EDP56291.1| homeobox transcription factor, putative [Aspergillus fumigatus
           A1163]
          Length = 697

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 13/81 (16%)

Query: 21  IMDNGKYV------RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           IMD  +Y       R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  W
Sbjct: 57  IMDYEEYAENLSRPRLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANW 112

Query: 75  FQNRRCREKQRK---EASRLQ 92
           FQNRR + KQ+K   E  R+Q
Sbjct: 113 FQNRRAKAKQQKRQEEFERMQ 133


>gi|1895062|gb|AAB49892.1| LIM homeobox protein [Drosophila melanogaster]
          Length = 534

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 15/95 (15%)

Query: 14  DSGGQKMIMD-------NGKYVR----YTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           +SG  K I D       +GK  R       +Q+  L   Y+  P+P ++ ++QL+     
Sbjct: 221 ESGSHKSIRDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE---- 276

Query: 63  LSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRK 97
           ++++ P+ I+VWFQN+RC++K++    +LQ    K
Sbjct: 277 MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQMHEEK 311


>gi|171692673|ref|XP_001911261.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946285|emb|CAP73086.1| unnamed protein product [Podospora anserina S mat+]
          Length = 707

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 224 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 278

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRL 112
               RL A +R+     + + E+ D L
Sbjct: 279 ----RLTADDRERMIKMRAVPEDFDNL 301


>gi|344281943|ref|XP_003412735.1| PREDICTED: stAR-related lipid transfer protein 8 [Loxodonta africana]
          Length = 1096

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 177  EETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAE 236
            EE++ E L  A      W+ MPG  P    +       G      +A   V   P  V  
Sbjct: 894  EESVQELLRDAAERFKGWMSMPG--PQDTELACRKAPDGHPLRMWKASTEVAAPPAVVLH 951

Query: 237  -ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP--ARDFWLLR-YTSV 292
             +L++R  W  D    +V+  L  G    +EL +   Y   ++AP   RDF +LR + S 
Sbjct: 952  RVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPHPCRDFVVLRMWRSD 1004

Query: 293  LEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDL 350
            L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G S +  V   DL
Sbjct: 1005 LPRGGCLLVSQSLD-----PEQPVPESGVRALMLTSQYLMEPCGLGHSRLTHVCRADL 1057


>gi|297828596|ref|XP_002882180.1| homeobox-leucine zipper protein hat5 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328020|gb|EFH58439.1| homeobox-leucine zipper protein hat5 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 268

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 66  KKRRLTTEQVHLLEKSFETENKLEPDRKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 121

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++   L++   +L +    ++++ND+L+ +V+ L 
Sbjct: 122 QLERDYDLLKSTYDQLLSNYDSIVKDNDKLRSEVTSLT 159


>gi|367024589|ref|XP_003661579.1| hypothetical protein MYCTH_2301118 [Myceliophthora thermophila ATCC
           42464]
 gi|347008847|gb|AEO56334.1| hypothetical protein MYCTH_2301118 [Myceliophthora thermophila ATCC
           42464]
          Length = 680

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 194 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 248

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRL 112
               RL A +R+     + + E+ D L
Sbjct: 249 ----RLTADDRERMMKMRAVPEDFDSL 271


>gi|302398841|gb|ADL36715.1| HD domain class transcription factor [Malus x domestica]
          Length = 289

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 12/125 (9%)

Query: 3   AVSSGGSRDSRDSGGQKMIMDNGKYV-----RYTPEQVEALERLYHECPKPSSMRRQQLI 57
           +VS  G     ++ G+  + D+G  V     R   EQV+ LE+ +    K    R+ QL 
Sbjct: 53  SVSFSGIELGEEAHGEDDLSDDGSQVGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLA 112

Query: 58  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQK 114
           R       ++P+QI +WFQNRR R K ++       + R+  A+   N  L  +N +LQ 
Sbjct: 113 RAL----GLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQSQNQKLQA 168

Query: 115 QVSQL 119
           ++  L
Sbjct: 169 EIMAL 173


>gi|18396130|ref|NP_564268.1| homeobox-leucine zipper protein ATHB-23 [Arabidopsis thaliana]
 gi|75155843|sp|Q8LFD3.1|ATB23_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-23; AltName:
           Full=HD-ZIP protein ATHB-23; AltName: Full=Homeodomain
           transcription factor ATHB-23
 gi|21537134|gb|AAM61475.1| putative DNA-binding protein [Arabidopsis thaliana]
 gi|32815953|gb|AAP88361.1| At1g26960 [Arabidopsis thaliana]
 gi|110736089|dbj|BAF00017.1| putative DNA-binding protein [Arabidopsis thaliana]
 gi|332192643|gb|AEE30764.1| homeobox-leucine zipper protein ATHB-23 [Arabidopsis thaliana]
          Length = 255

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 12/111 (10%)

Query: 14  DSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           D  G +   D+G     K  R   EQ++ALE+ +    K  S R+ +L R       ++P
Sbjct: 54  DMNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARAL----GLQP 109

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 116
           +QI +WFQNRR R K ++       + R+  ++   N++L  +N +LQ QV
Sbjct: 110 RQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQV 160


>gi|302398833|gb|ADL36711.1| HD domain class transcription factor [Malus x domestica]
          Length = 286

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 12/125 (9%)

Query: 3   AVSSGGSRDSRDSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLI 57
           +VS  G     ++ G+  + D+G     K  R   EQV+ LE+ +    K    R+ QL 
Sbjct: 53  SVSFSGIELGEEAHGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLA 112

Query: 58  RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQK 114
           R       ++P+QI +WFQNRR R K ++       + R+  A+   N  L  +N +LQ 
Sbjct: 113 RAL----GLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQSQNQKLQA 168

Query: 115 QVSQL 119
           ++  L
Sbjct: 169 EIMAL 173


>gi|115475738|ref|NP_001061465.1| Os08g0292000 [Oryza sativa Japonica Group]
 gi|38175461|dbj|BAD01388.1| putative OCL3 protein [Oryza sativa Japonica Group]
 gi|113623434|dbj|BAF23379.1| Os08g0292000 [Oryza sativa Japonica Group]
          Length = 786

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 15/94 (15%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y   T +Q E L R +  CP P     ++L +E     N+   QIK WFQN  CR K +
Sbjct: 64  RYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKEL----NMTETQIKYWFQN--CRTKMK 117

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           K          K     KLL +EN+ L+K+ ++L
Sbjct: 118 K---------FKNNEERKLLQKENEELKKENAEL 142


>gi|145544981|ref|XP_001458175.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124425994|emb|CAK90778.1| unnamed protein product [Paramecium tetraurelia]
          Length = 274

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 7/173 (4%)

Query: 179 TLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISH-GCTG-VAARACGLVGLDPTRVAE 236
            + E  +KA   A + ++    +   +  G+V  S  G TG   +R+  +  +DP +  E
Sbjct: 72  NILELQAKAIELAYQTIEEGKWEKEIEQDGVVFYSKPGSTGWKISRSEIIAEIDPKKAVE 131

Query: 237 ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDG 296
           +LKD   +     + + +N++      TI + Y+       L   RD   +   S L DG
Sbjct: 132 VLKDSTRFSEYNHTAQEINLI-KKIDDTISIQYILTKPNQVLQQQRDIVTVSKASSLPDG 190

Query: 297 SLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMD 349
           +  +  +S+      P  P    +VRAE++ S +  +P   G +++ +V   D
Sbjct: 191 TNFIVAKSI----EVPEAPVKEEYVRAEIIISFFGFKPIANGQTLVTMVQSFD 239


>gi|281349313|gb|EFB24897.1| hypothetical protein PANDA_021392 [Ailuropoda melanoleuca]
          Length = 1054

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 84/192 (43%), Gaps = 20/192 (10%)

Query: 165  RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
            R A  AG+ LS+  EE++ E L  A      W+ MPG  P    +       G      +
Sbjct: 838  RQAQAAGVSLSLYMEESVQELLRDAAERFKGWMSMPG--PQHTELACRKAPDGHPLRVWK 895

Query: 223  ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
            A   V   P  V   +L++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 896  ASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPH 948

Query: 281  -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
              RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 949  PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRAMMLTSQYLMEPCGLG 1003

Query: 339  GSIIHIVDHMDL 350
             S +  +   DL
Sbjct: 1004 RSRLTHICRADL 1015


>gi|194879942|ref|XP_001974333.1| GG21675 [Drosophila erecta]
 gi|190657520|gb|EDV54733.1| GG21675 [Drosophila erecta]
          Length = 534

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 19/106 (17%)

Query: 3   AVSSGGSRDSRDSGGQKMIMD-------NGKYVR----YTPEQVEALERLYHECPKPSSM 51
           ++S  GS    +SG  K I D       +GK  R       +Q+  L   Y+  P+P ++
Sbjct: 214 SMSDSGS----ESGSHKSIRDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDAL 269

Query: 52  RRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRK 97
            ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ    K
Sbjct: 270 MKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQMQQEK 311


>gi|17136566|ref|NP_476774.1| tailup, isoform B [Drosophila melanogaster]
 gi|5052638|gb|AAD38649.1|AF145674_1 tailup [Drosophila melanogaster]
 gi|22946785|gb|AAN11018.1| tailup, isoform B [Drosophila melanogaster]
 gi|220942306|gb|ACL83696.1| tup-PB [synthetic construct]
 gi|220952524|gb|ACL88805.1| tup-PB [synthetic construct]
          Length = 465

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 15/95 (15%)

Query: 14  DSGGQKMIMD-------NGKYVR----YTPEQVEALERLYHECPKPSSMRRQQLIRECPI 62
           +SG  K I D       +GK  R       +Q+  L   Y+  P+P ++ ++QL+     
Sbjct: 221 ESGSHKSIRDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE---- 276

Query: 63  LSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRK 97
           ++++ P+ I+VWFQN+RC++K++    +LQ    K
Sbjct: 277 MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQMQQEK 311


>gi|116779239|gb|ABK21195.1| unknown [Picea sitchensis]
          Length = 309

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 8/122 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++Q L +      N+ P+Q++VWFQNRR R K +
Sbjct: 169 KKLRLSKEQSALLEESFKENSSLNPKQKQALAKRL----NLRPRQVEVWFQNRRARTKLK 224

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     + + R   +    L +EN RLQK++ +L           Q  A   T   SCE 
Sbjct: 225 QTEVDCEFLKRCCES----LTDENRRLQKELQELRALKLASPLYMQMPAATLTMCPSCER 280

Query: 146 VV 147
           VV
Sbjct: 281 VV 282


>gi|358333778|dbj|GAA52242.1| LIM homeobox protein 3/4, partial [Clonorchis sinensis]
          Length = 405

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 5/61 (8%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 89
           T +Q+EAL+R Y+E PKP    R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 124 TAKQLEALKRAYNESPKPVRHVREQLSAE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 179

Query: 90  R 90
           R
Sbjct: 180 R 180


>gi|195035223|ref|XP_001989077.1| GH11521 [Drosophila grimshawi]
 gi|193905077|gb|EDW03944.1| GH11521 [Drosophila grimshawi]
          Length = 283

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 92
           +Q+  L   Y+  P+P ++ ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 81  KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 136

Query: 93  AVNRK 97
               K
Sbjct: 137 MQQEK 141


>gi|222640282|gb|EEE68414.1| hypothetical protein OsJ_26774 [Oryza sativa Japonica Group]
          Length = 922

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 15/94 (15%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y   T +Q E L R +  CP P     ++L +E     N+   QIK WFQN  CR K +
Sbjct: 196 RYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKEL----NMTETQIKYWFQN--CRTKMK 249

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           K          K     KLL +EN+ L+K+ ++L
Sbjct: 250 K---------FKNNEERKLLQKENEELKKENAEL 274


>gi|116788135|gb|ABK24769.1| unknown [Picea sitchensis]
          Length = 201

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 7/106 (6%)

Query: 14  DSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKV 73
           + G    I    K  R T EQV ALE+ +    K    ++ QL +       ++P+QI V
Sbjct: 75  EDGSDDCIHLGEKKRRLTLEQVRALEKNFEIANKLEPEKKMQLAKAL----GLQPRQIAV 130

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNK---LLMEENDRLQKQV 116
           WFQNRR R K ++       + +   A+ +    LMEEN+ LQ  V
Sbjct: 131 WFQNRRARWKTKQLEKDFNVLKQDYDALKQDYDNLMEENNNLQAMV 176


>gi|414869823|tpg|DAA48380.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 448

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 14/126 (11%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 265 KKLRLSKEQSAFLEESFKEHSTLNPKQKAALAKQL----NLRPRQVEVWFQNRRARTKLK 320

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT---FFRQQTQNAATLATTDTS 142
           +     + + R      + L EEN RL K++++L    T   FF +     AT  +   S
Sbjct: 321 QTEVDCEYLKR----CCETLTEENRRLHKELAELRALKTAPPFFMRLP---ATTLSMCPS 373

Query: 143 CESVVT 148
           CE V +
Sbjct: 374 CERVAS 379


>gi|119495872|ref|XP_001264712.1| homeobox transcription factor, putative [Neosartorya fischeri NRRL
           181]
 gi|119412874|gb|EAW22815.1| homeobox transcription factor, putative [Neosartorya fischeri NRRL
           181]
          Length = 697

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 21  IMDNGKYV------RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           IMD  +Y       R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  W
Sbjct: 57  IMDYEEYAENLSRPRLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANW 112

Query: 75  FQNRRCREKQRKEASRLQAVNR 96
           FQNRR + KQ+K     + + +
Sbjct: 113 FQNRRAKAKQQKRQEEFERMQK 134


>gi|327298205|ref|XP_003233796.1| hypothetical protein TERG_05669 [Trichophyton rubrum CBS 118892]
 gi|326463974|gb|EGD89427.1| hypothetical protein TERG_05669 [Trichophyton rubrum CBS 118892]
          Length = 566

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 9/111 (8%)

Query: 13  RDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 72
           + +GG+K+     K  R T  Q   L   +     P +  R++L RE P LS   P+Q++
Sbjct: 155 KPTGGEKIDRKKMKRFRLTHNQTRYLMSEFTRQAHPDAAHRERLSREIPGLS---PRQVQ 211

Query: 73  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           VWFQNRR + K      RL   +R+    ++ L ++ D  Q   S    E+
Sbjct: 212 VWFQNRRAKLK------RLSLDDRERVLKSRALPDDFDMAQSLQSSYATEH 256


>gi|293335205|ref|NP_001170401.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
 gi|224035649|gb|ACN36900.1| unknown [Zea mays]
 gi|414589431|tpg|DAA40002.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 283

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQ---QLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           R T EQV  LE  + E  +    +R+   +   E      I P+Q+ VWFQNRR R + +
Sbjct: 93  RLTAEQVRELELSFEEEKRKLEPKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWRSK 152

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++  RL+A +  L A    L+ +NDRL+ QV  L 
Sbjct: 153 QLEQDFDRLRAAHDDLIAGRDALLADNDRLRSQVITLT 190


>gi|15232122|ref|NP_186796.1| homeobox-leucine zipper protein HAT5 [Arabidopsis thaliana]
 gi|399900|sp|Q02283.1|HAT5_ARATH RecName: Full=Homeobox-leucine zipper protein HAT5; AltName:
           Full=HD-ZIP protein ATHB-1; AltName: Full=Homeodomain
           transcription factor ATHB-1; AltName:
           Full=Homeodomain-leucine zipper protein HAT5;
           Short=HD-ZIP protein 5
 gi|6016706|gb|AAF01532.1|AC009325_2 homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (HD-ZIP
           protein ATHB-1) [Arabidopsis thaliana]
 gi|16329|emb|CAA41625.1| Athb-1 protein [Arabidopsis thaliana]
 gi|16648822|gb|AAL25601.1| AT3g01470/F4P13_2 [Arabidopsis thaliana]
 gi|20466121|gb|AAM19982.1| AT3g01470/F4P13_2 [Arabidopsis thaliana]
 gi|332640149|gb|AEE73670.1| homeobox-leucine zipper protein HAT5 [Arabidopsis thaliana]
          Length = 272

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 8/110 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 68  KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 123

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
              ++   L++   +L +    ++ +ND+L+ +V+ L  E    +Q+T N
Sbjct: 124 QLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLT-EKLQGKQETAN 172


>gi|392869529|gb|EAS28038.2| hypothetical protein CIMG_08965 [Coccidioides immitis RS]
          Length = 665

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 7/76 (9%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +N+   ++  WFQNRR +
Sbjct: 70  VENLSRPRLTKEQVETLEAQFQAQPKPTSNVKRQLA----MQTNLTLPRVANWFQNRRAK 125

Query: 82  EKQRK---EASRLQAV 94
           EKQ+K   E  R+QA+
Sbjct: 126 EKQQKRQEEFKRMQAM 141


>gi|302793704|ref|XP_002978617.1| hypothetical protein SELMODRAFT_108871 [Selaginella moellendorffii]
 gi|300153966|gb|EFJ20603.1| hypothetical protein SELMODRAFT_108871 [Selaginella moellendorffii]
          Length = 128

 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R + EQV+ALE+ +    K    R+ QL +E      ++P+Q+ VWFQNRR R K +
Sbjct: 35  KKRRLSVEQVKALEKNFEIENKLEPDRKIQLAKEL----GLQPRQVAVWFQNRRARWKTK 90

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
              K+   L++    L A    L +E D+LQ +V  L
Sbjct: 91  QLEKDYDLLKSEYDDLKASYVDLAKERDKLQAEVDLL 127


>gi|297820900|ref|XP_002878333.1| hypothetical protein ARALYDRAFT_486512 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324171|gb|EFH54592.1| hypothetical protein ARALYDRAFT_486512 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 315

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 13/119 (10%)

Query: 3   AVSSGGSRDSRDSGGQKMIMDNG--KYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           + S GG  D  D  G     D+G  K +R + EQ   LE  + E    +  ++  L ++ 
Sbjct: 140 SCSLGGGSDDEDGSGNG---DDGSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQL 196

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
               N+  +Q++VWFQNRR R K ++     + + R        L +EN RLQK+VS+L
Sbjct: 197 ----NLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCEN----LTDENRRLQKEVSEL 247


>gi|242768031|ref|XP_002341487.1| homeobox  transcription factor, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218724683|gb|EED24100.1| homeobox transcription factor, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 725

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 7/83 (8%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 86
           R T EQV+ LE  +   PKP+S ++    RE  + +N+   ++  WFQNRR + KQ+K  
Sbjct: 69  RLTKEQVDTLEAQFQAHPKPNSNKK----RELAVQTNLSLPRVANWFQNRRAKAKQQKRQ 124

Query: 87  -EASRLQAVNRKLTAMNKLLMEE 108
            E  R+Q   ++     K + EE
Sbjct: 125 EEFERMQREAKEKDEQAKPIKEE 147


>gi|218200868|gb|EEC83295.1| hypothetical protein OsI_28655 [Oryza sativa Indica Group]
          Length = 790

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 15/94 (15%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Y   T +Q E L R +  CP P     ++L +E     N+   QIK WFQN  CR K +
Sbjct: 64  RYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKEL----NMTETQIKYWFQN--CRTKMK 117

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           K          K     KLL +EN+ L+K+ ++L
Sbjct: 118 K---------FKNNEERKLLQKENEELKKENAEL 142


>gi|357452773|ref|XP_003596663.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355485711|gb|AES66914.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 545

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 101/494 (20%), Positives = 185/494 (37%), Gaps = 106/494 (21%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSW----YRDCRSVEVVNVLPTGSSGTIELLYMQLYAP 275
           A+R   L+ + PT++ E+L D   W    Y       ++  +       + ++  + + P
Sbjct: 108 ASRDKALIKISPTKLVELLMDVNQWSTAFYNIVSGARILGSIEGSYDEKMHVMSAEFHLP 167

Query: 276 TTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPC 335
           + + P R     RY+         V + SL +    PS     +F +    PSG LI   
Sbjct: 168 SPVIPTRKCVFARYSKQFTHNIWAVVDVSLEDILQSPS----NNFHKR---PSGCLIEGM 220

Query: 336 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTG 395
             G S +  ++H++ +   + ++ RPL  S+        + ++    + S+ +  P +  
Sbjct: 221 PDGNSKVIWLEHVEADYSKLSDLFRPLVTSALAFGATRWLTSIVRYIEWSETLKAPKLIA 280

Query: 396 --------WGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLE--SDGIDDVTVHVNSSP 445
                    GR   +   L+ R+ R F   L   T   W  L     G  D+ V      
Sbjct: 281 DAGVLIPQIGR--TSFLKLADRMMRRFCANLGSTTKNPWIRLAPLPAGSADIRV------ 332

Query: 446 SKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEWADSSIDAYS 503
             M+   ++     P  ++   C   + L  +V P  L  FLR    RS+W   S +   
Sbjct: 333 --MIANDMAGSTNEPIGTSLFFC---TTLWLNVSPNRLFNFLRHEKSRSKWDKHSQN--- 384

Query: 504 AAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEH-EEFLEVIKLENMAHYREDMIMPSDIF 562
             +++   C L                  T +H E  + +++  +           ++IF
Sbjct: 385 -LSIREFACIL------------------TGKHPENRVSLLRARD----------KNEIF 415

Query: 563 LLQLCSGVDENAVGNCAELVFAPID---------ASFSDDAPIIPSGFRIIPLDSGKDTP 613
            LQ  S  D  A    + +++ P+D          S  DD    PSGF IIP    +D  
Sbjct: 416 YLQE-SYKDTTA----SYVIYCPLDEQKLTHLATGSNPDDVVAFPSGFAIIPGGLPRD-- 468

Query: 614 SPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYV 673
                            G+K  G++++   + +S++TI+F    + +   N AS+  + V
Sbjct: 469 -----------------GDKGKGNANS-TANDESLLTISFHIIGKAN---NAASIPPESV 507

Query: 674 RGIIASVQRVALAL 687
           + I   V     A+
Sbjct: 508 QTIYNMVTETMAAI 521


>gi|402072464|gb|EJT68253.1| hypothetical protein GGTG_14167 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 837

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 259 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 313

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQ 113
               RL A +R      + + ++ D +Q
Sbjct: 314 ----RLTADDRDRMIKMRAVPDDFDNVQ 337


>gi|16334|emb|CAA44513.1| Athb-3 [Arabidopsis thaliana]
          Length = 151

 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 8/112 (7%)

Query: 8   GSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIE 67
           G  D+    G  M++   K  R   EQV ALE+ +    K    R+ QL +       ++
Sbjct: 35  GEEDNLSDDGSHMMLGEKKK-RLNLEQVRALEKSFELGNKLEPERKMQLAKAL----GLQ 89

Query: 68  PKQIKVWFQNRRCREKQRKEASRLQAVNRK---LTAMNKLLMEENDRLQKQV 116
           P+QI +WFQNRR R K ++      ++ ++   L + N  L+  N +L  +V
Sbjct: 90  PRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAEV 141


>gi|432100127|gb|ELK29013.1| StAR-related lipid transfer protein 8 [Myotis davidii]
          Length = 1165

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 85/192 (44%), Gaps = 20/192 (10%)

Query: 165  RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
            R A  AG+ LS+  EE++ E L  A      W+ +PG  P    +     S G      +
Sbjct: 949  RQAQAAGVSLSLYMEESVQELLRDAAERFKGWMSVPG--PQDTELACRKASDGHPLRVWK 1006

Query: 223  ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
            A   V   P  V   +L++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 1007 ASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPH 1059

Query: 281  -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
              RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 1060 PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRALMLTSQYLMEPCGLG 1114

Query: 339  GSIIHIVDHMDL 350
             S +  +   DL
Sbjct: 1115 RSRLTHICRADL 1126


>gi|3868833|dbj|BAA34237.1| CRHB3 [Ceratopteris richardii]
          Length = 212

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 12/112 (10%)

Query: 8   GSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIE 67
           GSR S +  G        K +R + EQ   LE  + E    +S ++  L ++     N+ 
Sbjct: 44  GSRGSDEEEGN----STRKKLRLSKEQSALLEESFKEYNTLNSKQKSALAKQL----NLR 95

Query: 68  PKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V +L
Sbjct: 96  PRQVEVWFQNRRARTKLKQTEVDCELLKRCCES----LTEENRRLQKEVQEL 143


>gi|170053181|ref|XP_001862556.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
 gi|167873811|gb|EDS37194.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
          Length = 438

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 4/66 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 92
           +Q++ L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 241 KQLQTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 296

Query: 93  AVNRKL 98
               K+
Sbjct: 297 MQQEKV 302


>gi|302774242|ref|XP_002970538.1| hypothetical protein SELMODRAFT_18196 [Selaginella moellendorffii]
 gi|300162054|gb|EFJ28668.1| hypothetical protein SELMODRAFT_18196 [Selaginella moellendorffii]
          Length = 104

 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R + EQV+ALE+ +    K    R+ QL +E      ++P+Q+ VWFQNRR R K +
Sbjct: 15  KKRRLSVEQVKALEKNFEIENKLEPDRKIQLAKEL----GLQPRQVAVWFQNRRARWKTK 70

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQV 116
              K+   L++    L A    L +E D+LQ +V
Sbjct: 71  QLEKDYDLLKSEYDDLKASYVDLAKERDKLQAEV 104


>gi|118488004|gb|ABK95823.1| unknown [Populus trichocarpa]
          Length = 314

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 8/118 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +QV+ LE+ +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 86  KKRRLTVDQVQFLEKSFELENKLEPERKIQLAKDL----GLQPRQVAIWFQNRRARWKTK 141

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTD 140
              K+   LQ+    L A    L++E ++L+ +V+ L+ +    +++ +  + L+  D
Sbjct: 142 QLEKDYDVLQSSYNSLKADYDNLLKEKEKLKAEVN-LLTDKLLLKEKEKGISELSDKD 198


>gi|193237555|dbj|BAG50054.1| transcription factor Homeobox [Lotus japonicus]
          Length = 284

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV  LE+ + E  K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 65  KKRRLTSEQVNLLEKSFEEENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 120

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
              ++   L++    L A    + +EN++L+ +V  L
Sbjct: 121 QLERDYDVLKSSYDSLLATYDTIAKENEKLKSEVVSL 157


>gi|301791670|ref|XP_002930803.1| PREDICTED: stAR-related lipid transfer protein 8-like [Ailuropoda
            melanoleuca]
          Length = 1131

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 84/192 (43%), Gaps = 20/192 (10%)

Query: 165  RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
            R A  AG+ LS+  EE++ E L  A      W+ MPG  P    +       G      +
Sbjct: 915  RQAQAAGVSLSLYMEESVQELLRDAAERFKGWMSMPG--PQHTELACRKAPDGHPLRVWK 972

Query: 223  ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
            A   V   P  V   +L++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 973  ASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPH 1025

Query: 281  -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
              RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 1026 PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRAMMLTSQYLMEPCGLG 1080

Query: 339  GSIIHIVDHMDL 350
             S +  +   DL
Sbjct: 1081 RSRLTHICRADL 1092


>gi|300709018|ref|XP_002996678.1| hypothetical protein NCER_100211 [Nosema ceranae BRL01]
 gi|239605997|gb|EEQ83007.1| hypothetical protein NCER_100211 [Nosema ceranae BRL01]
          Length = 169

 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 4/60 (6%)

Query: 29 RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
          R T  Q++ LE+ +  CP+P S  R++L  +     ++ P+ ++VWFQNRR + K+++++
Sbjct: 35 RTTKAQLKVLEKTFENCPRPDSTMRKKLADQL----SMTPRSVQVWFQNRRAKVKKQQQS 90


>gi|356502193|ref|XP_003519905.1| PREDICTED: homeobox-leucine zipper protein ATHB-40-like [Glycine
           max]
          Length = 212

 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 10/111 (9%)

Query: 10  RDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           R+ ++ GG+   +   K  + T EQ+  LER +    K  S R+ QL  E     +++P+
Sbjct: 39  RNRKNRGGENGTIITKKR-KLTVEQISLLERNFSNEHKLESERKDQLALEL----SLDPR 93

Query: 70  QIKVWFQNRRCREKQRK---EASRLQAVNRKLTAMNKLLME-ENDRLQKQV 116
           Q+ VWFQNRR R K +K   E S L+ V+ + T ++K  +E E  +L++Q+
Sbjct: 94  QVAVWFQNRRSRWKTQKLEEEYSNLKNVH-ETTMLDKCHLENEVLKLKEQL 143


>gi|357533803|gb|AET82955.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533855|gb|AET82981.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533901|gb|AET83004.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
          Length = 146

 Score = 50.8 bits (120), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 14  DSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKV 73
           + G    I    K  R T EQ  ALE+ +    K    ++ QL +       ++P+QI V
Sbjct: 22  EDGSDDCIHLGEKKRRLTLEQARALEKNFEMANKLEPEKKMQLAKAL----GLQPRQIAV 77

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNK---LLMEENDRLQKQVSQL 119
           WFQNRR R K ++       +     ++ +    LMEEN+ +Q  + +L
Sbjct: 78  WFQNRRARWKTKQLEKDFNILKHDYDSLKQNYDNLMEENNNIQAMIERL 126


>gi|326492792|dbj|BAJ90252.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326496989|dbj|BAJ98521.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326504248|dbj|BAJ90956.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326528853|dbj|BAJ97448.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 331

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 10/109 (9%)

Query: 11  DSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQ 70
           ++ D G Q   +   K  R   EQV  LE+ +    K    R+ QL R       ++P+Q
Sbjct: 105 ETSDDGSQ---LGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARAL----GLQPRQ 157

Query: 71  IKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 116
           + +WFQNRR R K ++       + R+  A+   N  L+  N +LQ ++
Sbjct: 158 VAIWFQNRRARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEI 206


>gi|242049450|ref|XP_002462469.1| hypothetical protein SORBIDRAFT_02g026150 [Sorghum bicolor]
 gi|241925846|gb|EER98990.1| hypothetical protein SORBIDRAFT_02g026150 [Sorghum bicolor]
          Length = 369

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 8/124 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 188 KKLRLSKEQSAFLEESFKEHATLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 243

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     + + R      + L EEN RLQK++++L    T         AT  +   SCE 
Sbjct: 244 QTEVDCEYLKR----CCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCER 299

Query: 146 VVTS 149
           V ++
Sbjct: 300 VASN 303


>gi|449436253|ref|XP_004135907.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Cucumis
           sativus]
          Length = 326

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 8/119 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++Q L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 167 KKLRLSKEQSAFLEESFKEHNTLNPKQKQALAKQL----NLRPRQVEVWFQNRRARTKLK 222

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCE 144
           +     + + R      + L EEN RLQK++ +L    T      Q  AT  T   SCE
Sbjct: 223 QTEVDCEYLKR----CCETLTEENRRLQKELQELRALKTTNSLYMQLPATTLTMCPSCE 277


>gi|145239455|ref|XP_001392374.1| hypothetical protein ANI_1_382074 [Aspergillus niger CBS 513.88]
 gi|134076885|emb|CAK45294.1| unnamed protein product [Aspergillus niger]
 gi|350629537|gb|EHA17910.1| hypothetical protein ASPNIDRAFT_38485 [Aspergillus niger ATCC 1015]
          Length = 705

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 21  IMDNGKYV------RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           IMD  +Y       R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  W
Sbjct: 57  IMDYEEYAENLSRPRLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANW 112

Query: 75  FQNRRCREKQRKEASRLQAV 94
           FQNRR + KQ+K     + +
Sbjct: 113 FQNRRAKAKQQKRQEEFEKM 132


>gi|356503487|ref|XP_003520539.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max]
          Length = 288

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 20/145 (13%)

Query: 5   SSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILS 64
           SS G+ D  ++G  +      K +R + +Q   LE  + E    +  ++  L ++     
Sbjct: 113 SSEGASDDDENGSSR------KKLRLSKQQSAFLEDSFKEHTTLNPKQKLALAKQL---- 162

Query: 65  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT 124
           N+ P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK++ +L    T
Sbjct: 163 NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKELQELRALKT 218

Query: 125 ---FFRQQTQNAATLATTDTSCESV 146
              FF Q     AT  T   +CE V
Sbjct: 219 CQPFFMQL---PATTLTMCPACERV 240


>gi|303313929|ref|XP_003066973.1| Homeobox domain containing protein [Coccidioides posadasii C735
           delta SOWgp]
 gi|240106641|gb|EER24828.1| Homeobox domain containing protein [Coccidioides posadasii C735
           delta SOWgp]
          Length = 665

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +N+   ++  WFQNRR +
Sbjct: 70  VENLSRPRLTKEQVETLEAQFRAQPKPTSNVKRQLA----MQTNLTLPRVANWFQNRRAK 125

Query: 82  EKQRK---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           EKQ+K   E  R+QA+        + +    D  + Q +  V
Sbjct: 126 EKQQKRQEEFKRMQAMKSSENLKREEISSSTDARRTQYADKV 167


>gi|326483232|gb|EGE07242.1| hypothetical protein TEQG_06315 [Trichophyton equinum CBS 127.97]
          Length = 566

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 9/111 (8%)

Query: 13  RDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 72
           + +GG+K+     K  R T  Q   L   +     P +  R++L RE P LS   P+Q++
Sbjct: 155 KPTGGEKIDRKKMKRFRLTHNQTRYLMSEFTRQAHPDAAHRERLSREIPGLS---PRQVQ 211

Query: 73  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           VWFQNRR + K      RL   +R+    ++ L ++ D  Q   S    E+
Sbjct: 212 VWFQNRRAKLK------RLSLDDRERVLKSRALPDDFDMAQSLQSSYATEH 256


>gi|338729277|ref|XP_001496670.3| PREDICTED: stAR-related lipid transfer protein 8 [Equus caballus]
          Length = 1095

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 84/192 (43%), Gaps = 20/192 (10%)

Query: 165  RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
            R A  AG+ LS+  EE++ E L  A      WV +PG  P    +       G      +
Sbjct: 879  RQARAAGMSLSLYMEESVQELLRDAAERFKGWVSVPG--PQHTELACRKAPDGHPLRVWK 936

Query: 223  ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
            A   V   P  V   +L++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 937  ASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPH 989

Query: 281  -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
              RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 990  PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRALMLTSQYLMEPCGLG 1044

Query: 339  GSIIHIVDHMDL 350
             S +  +   DL
Sbjct: 1045 RSRLTHICRADL 1056


>gi|326475795|gb|EGD99804.1| hypothetical protein TESG_07141 [Trichophyton tonsurans CBS 112818]
          Length = 566

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 9/109 (8%)

Query: 15  SGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           +GG+K+     K  R T  Q   L   +     P +  R++L RE P LS   P+Q++VW
Sbjct: 157 TGGEKIDRKKMKRFRLTHNQTRYLMSEFTRQAHPDAAHRERLSREIPGLS---PRQVQVW 213

Query: 75  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 123
           FQNRR + K      RL   +R+    ++ L ++ D  Q   S    E+
Sbjct: 214 FQNRRAKLK------RLSLDDRERVLKSRALPDDFDMAQSLQSSYATEH 256


>gi|255571291|ref|XP_002526595.1| Homeobox protein GLABRA2, putative [Ricinus communis]
 gi|223534089|gb|EEF35807.1| Homeobox protein GLABRA2, putative [Ricinus communis]
          Length = 546

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 42/290 (14%)

Query: 226 LVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTG----SSGTIELLYMQLYAPTT 277
           +V ++   + EI  D   W     ++     ++ VL TG     SG+++L+Y Q++  + 
Sbjct: 116 MVAINALNLVEIFLDPNKWVDLFPTIVTKASIIQVLETGMLGNRSGSLQLMYEQMHILSP 175

Query: 278 LAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEG 337
           L P R+F+ LR+   +E  + V+ + S +       + +     R+  LPSG +I     
Sbjct: 176 LVPPREFYFLRHCQQIEGATWVIADVSYD------CLKETILSSRSWKLPSGCMIEELPN 229

Query: 338 GGSIIHIVDHMDLEPWS-VPEVLRPLYESSTLIAQKTTMAALRHLRQ---ISQEVSQPS- 392
           G S +  ++H++++  +    + R L   S+    +  +AAL+ + +    S   + P+ 
Sbjct: 230 GFSKVTWIEHVEVDDKTQTHRLYRDLICGSSAYGAERWIAALQRVCERLAFSFRETLPTR 289

Query: 393 ------VTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPS 446
                  +  GRR  +L  LS R+ R F   L+      +  L       V V V  S  
Sbjct: 290 DFGGVITSTEGRR--SLMKLSHRMVRSFCAMLSMSGKLDFPQLSEVNNSGVRVSVRKSTE 347

Query: 447 KMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREH--RSEW 494
                        P     ++ + A+ L   +PP  +  F ++   R +W
Sbjct: 348 -------------PGQPGGLIVSAATSLWLPLPPQNVFSFFKDEKTRVQW 384


>gi|121701879|ref|XP_001269204.1| homeobox  transcription factor, putative [Aspergillus clavatus NRRL
           1]
 gi|119397347|gb|EAW07778.1| homeobox transcription factor, putative [Aspergillus clavatus NRRL
           1]
          Length = 691

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 13/81 (16%)

Query: 21  IMDNGKYV------RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           IMD  +Y       R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  W
Sbjct: 57  IMDYEEYAENLSRPRLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANW 112

Query: 75  FQNRRCREKQRK---EASRLQ 92
           FQNRR + KQ+K   E  R+Q
Sbjct: 113 FQNRRAKAKQQKRQEEFERMQ 133


>gi|358372906|dbj|GAA89507.1| homeobox transcription factor [Aspergillus kawachii IFO 4308]
          Length = 705

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 21  IMDNGKYV------RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           IMD  +Y       R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  W
Sbjct: 57  IMDYEEYAENLSRPRLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANW 112

Query: 75  FQNRRCREKQRKEASRLQAV 94
           FQNRR + KQ+K     + +
Sbjct: 113 FQNRRAKAKQQKRQEEFEKM 132


>gi|226532128|ref|NP_001149340.1| homeodomain-leucine zipper transcription factor TaHDZipI-1 [Zea
           mays]
 gi|195626512|gb|ACG35086.1| homeodomain-leucine zipper transcription factor TaHDZipI-1 [Zea
           mays]
          Length = 309

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R  PEQV ALER +    +    R+ ++ R+  +     P+Q+ VWFQNRR R K +
Sbjct: 51  KKRRLAPEQVRALERCFEADNRLDPDRKARVARDLAL----HPRQVAVWFQNRRARWKAK 106

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
              ++ + L+A +  L A    L ++ D L  ++ +L
Sbjct: 107 ALHRDLAALRARHDALRAACDALRQDKDALAAEIREL 143


>gi|116180364|ref|XP_001220031.1| hypothetical protein CHGG_00810 [Chaetomium globosum CBS 148.51]
 gi|88185107|gb|EAQ92575.1| hypothetical protein CHGG_00810 [Chaetomium globosum CBS 148.51]
          Length = 641

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 27/151 (17%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R   ++VE LER + +  KPSS  +++L  +      +E  +I  WFQNRR +EKQ K+ 
Sbjct: 70  RLAKDEVELLEREFSKNQKPSSSTKRELAEQM----GVEVPRINNWFQNRRAKEKQIKKT 125

Query: 89  SRLQAVNRKLTAMN--------------KLLMEENDRLQKQVSQLVY-------ENTFFR 127
           +  +A   +  A +              K   + N    + +S   +        N + +
Sbjct: 126 AEFEAQQARERAASDAESTGDQDQESTGKFYPDSNQDQSETLSTATFGQDDDTVHNDYAQ 185

Query: 128 QQTQ--NAATLATTDTSCESVVTSGQHHLTP 156
            +T+  +A TLA+  T+      SGQH   P
Sbjct: 186 LKTEPIDAITLASVPTASACESPSGQHEFQP 216


>gi|74007583|ref|XP_549052.2| PREDICTED: stAR-related lipid transfer protein 8 [Canis lupus
            familiaris]
          Length = 1085

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 165  RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPG-------MKPGPDS--IGIVAIS 213
            R A  AG+ LS+  EE++ E L  A      W+ MPG        +  PD   + +  +S
Sbjct: 869  RQAQAAGISLSLYMEESVQELLRDAAERFKGWMSMPGPQHTELACRKAPDGHPLRVWKVS 928

Query: 214  HGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLY 273
               T VAA         P  +  +L++R  W  D    +V+  L  G    +EL +   Y
Sbjct: 929  ---TEVAAPP-------PVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---Y 971

Query: 274  APTTLAP--ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGY 330
               ++AP   RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S Y
Sbjct: 972  VTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRAMMLTSQY 1026

Query: 331  LIRPCEGGGSIIHIVDHMDL 350
            L+ PC  G S +  +   DL
Sbjct: 1027 LMEPCGLGRSRLTHICRADL 1046


>gi|357153850|ref|XP_003576587.1| PREDICTED: homeobox-leucine zipper protein HOX11-like [Brachypodium
           distachyon]
          Length = 336

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 13/133 (9%)

Query: 14  DSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKV 73
           D GG      + K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++V
Sbjct: 169 DDGG-----SSRKKLRLSKEQAAFLEESFKEHSTLNPKQKVALAKQL----NLLPRQVEV 219

Query: 74  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA 133
           WFQNRR R K ++     + + R      + L EEN RLQK++++L    T         
Sbjct: 220 WFQNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLQKELAELRALKTVHPFYMHLP 275

Query: 134 ATLATTDTSCESV 146
           AT  +   SCE V
Sbjct: 276 ATTLSMCPSCERV 288


>gi|50556204|ref|XP_505510.1| YALI0F16852p [Yarrowia lipolytica]
 gi|49651380|emb|CAG78319.1| YALI0F16852p [Yarrowia lipolytica CLIB122]
          Length = 850

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 4/53 (7%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
            Q+  LE++++E PKP    R +L R+     ++  K I++WFQNRR +EKQ 
Sbjct: 285 HQLRVLEKVFNETPKPCLKTRTELERDL----DLPKKNIQIWFQNRRAKEKQN 333


>gi|3868847|dbj|BAA34244.1| CRHB10 [Ceratopteris richardii]
          Length = 214

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 82/189 (43%), Gaps = 41/189 (21%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHE----CPKPSSMRRQQL 56
           +  VSS  S D  D    +      K +R T EQ   LE  + E     PK  S   +QL
Sbjct: 42  LCEVSSRAS-DEEDGASTR------KKLRLTKEQSAFLEESFKEHSTFNPKQKSALAKQL 94

Query: 57  IRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV 116
                   N  P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V
Sbjct: 95  --------NFRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCES----LTEENRRLQKEV 142

Query: 117 SQL---------VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDA 167
            +L         V  + F+      AATLA    SCE + T       P +QH       
Sbjct: 143 QELRALKMGAPCVVAHDFY--MPLPAATLAMC-PSCERLSTLDPSSRPPPKQH------M 193

Query: 168 SPAGLLSIA 176
           S A L+S+A
Sbjct: 194 SSAPLVSLA 202


>gi|194694736|gb|ACF81452.1| unknown [Zea mays]
 gi|414885693|tpg|DAA61707.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 333

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 165 KKLRLSKEQSAFLEDSFKEHATLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 220

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     + + R      + L EEN RLQK++S+L    T         AT  +   SCE 
Sbjct: 221 QTEVDCEYLKR----CCETLTEENRRLQKELSELRALKTVHPFYMHLPATTLSMCPSCER 276

Query: 146 V 146
           V
Sbjct: 277 V 277


>gi|357483319|ref|XP_003611946.1| Homeodomain leucine zipper protein [Medicago truncatula]
 gi|355513281|gb|AES94904.1| Homeodomain leucine zipper protein [Medicago truncatula]
          Length = 221

 Score = 50.8 bits (120), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 8/107 (7%)

Query: 10  RDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           R  ++ GG+    D  K  + + EQV  LE  +    K  S ++ +L  E      ++P+
Sbjct: 37  RSKKNKGGENSANDMNKKRKLSDEQVNILEENFGNEHKLESEKKDRLAMEL----GLDPR 92

Query: 70  QIKVWFQNRRCREKQRK---EASRLQAVNRKLTAMNKLLMEENDRLQ 113
           Q+ VWFQNRR R K +K   E   L+ ++   T + K L+E   R Q
Sbjct: 93  QVAVWFQNRRARWKNKKLEEEYFSLKKIHES-TILEKCLLETKLREQ 138


>gi|449434806|ref|XP_004135187.1| PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Cucumis
           sativus]
 gi|449478430|ref|XP_004155316.1| PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Cucumis
           sativus]
          Length = 298

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 27/174 (15%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           M+   + G  +  D G Q       K  R   EQV+ LE+ +    K    R+ QL R  
Sbjct: 65  MVEEGNNGEDEFSDDGSQA----GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL 120

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVS 117
                ++P+QI +WFQNRR R K ++       + R+  A+   N+ L   N +LQ ++ 
Sbjct: 121 ----GLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKSDNEALKSHNQKLQAEIM 176

Query: 118 QLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHL-----------TPQQQH 160
            L       R+ T++      T+ SC +   +   ++           +P QQH
Sbjct: 177 ALKS-----REPTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQQH 225


>gi|209171585|gb|ACI42913.1| tendril-less [Lathyrus odoratus]
          Length = 237

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 15/89 (16%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 90
           T  QV+ALER +HE  K    R+ +L  E      ++P+Q+ VWFQNRR R K       
Sbjct: 78  TSNQVDALERSFHEEIKLEPERKMKLSAEL----GLQPRQVAVWFQNRRTRWK------- 126

Query: 91  LQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
                ++L     +L +EN +LQ++V +L
Sbjct: 127 ----TKQLEHSYDVLKQENQKLQEEVMEL 151


>gi|119173966|ref|XP_001239344.1| hypothetical protein CIMG_08965 [Coccidioides immitis RS]
          Length = 627

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 7/76 (9%)

Query: 22  MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +N+   ++  WFQNRR +
Sbjct: 70  VENLSRPRLTKEQVETLEAQFQAQPKPTSNVKRQLA----MQTNLTLPRVANWFQNRRAK 125

Query: 82  EKQRK---EASRLQAV 94
           EKQ+K   E  R+QA+
Sbjct: 126 EKQQKRQEEFKRMQAM 141


>gi|212722080|ref|NP_001132562.1| uncharacterized protein LOC100194027 [Zea mays]
 gi|195644626|gb|ACG41781.1| homeobox-leucine zipper protein HAT14 [Zea mays]
          Length = 333

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 165 KKLRLSKEQSAFLEDSFKEHATLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 220

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     + + R      + L EEN RLQK++S+L    T         AT  +   SCE 
Sbjct: 221 QTEVDCEYLKR----CCETLTEENRRLQKELSELRSLKTVHPFYMHLPATTLSMCPSCER 276

Query: 146 V 146
           V
Sbjct: 277 V 277


>gi|168015694|ref|XP_001760385.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|168015850|ref|XP_001760463.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688399|gb|EDQ74776.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688477|gb|EDQ74854.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 160

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 34/165 (20%)

Query: 4   VSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHE----CPKPSSMRRQQLIRE 59
           +SS G  D  D G  +      K +R + EQ   LE  + E     PK  +   +QL   
Sbjct: 1   MSSRGGSDDEDEGTAR------KKLRLSKEQSALLEESFKEHSTLNPKQKNALAKQL--- 51

Query: 60  CPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
                 + P+Q++VWFQNRR R K ++     + + R +    + L EEN RLQK++ +L
Sbjct: 52  -----GLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCV----ETLTEENRRLQKELQEL 102

Query: 120 ---------VYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLT 155
                    V  + F+      AATL T   SCE V T     LT
Sbjct: 103 RAIKVAPPCVISHDFY--MPLPAATL-TMCPSCERVATVDNRSLT 144


>gi|75115970|sp|Q67UE2.1|HOX11_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX11; AltName:
           Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain
           transcription factor HOX11; AltName: Full=OsHox11
 gi|51536105|dbj|BAD38229.1| putative homeodomain leucine zipper protein CPHB-3 [Oryza sativa
           Japonica Group]
          Length = 362

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 177 KKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 232

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     + + R      + L EEN RLQK++++L    T         AT  +   SCE 
Sbjct: 233 QTEVDCEYLKR----CCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCER 288

Query: 146 V 146
           V
Sbjct: 289 V 289


>gi|297741218|emb|CBI32169.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 17/130 (13%)

Query: 23  DNG---KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRR 79
           DNG   K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR
Sbjct: 196 DNGLTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQL----NLRPRQVEVWFQNRR 251

Query: 80  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ---LVYENTFFRQQTQNAATL 136
            R K ++     + + R      + L EEN RL K++ +   L   N F+    Q  AT 
Sbjct: 252 ARTKLKQTEVDCEYLKR----CCETLTEENRRLHKELQELRALKTSNPFY---MQLPATT 304

Query: 137 ATTDTSCESV 146
            T   SCE V
Sbjct: 305 LTMCPSCERV 314


>gi|212542785|ref|XP_002151547.1| homeobox  transcription factor, putative [Talaromyces marneffei
           ATCC 18224]
 gi|210066454|gb|EEA20547.1| homeobox transcription factor, putative [Talaromyces marneffei ATCC
           18224]
          Length = 727

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 86
           R T EQV+ LE  +   PKP+S ++    RE  + +N+   ++  WFQNRR + KQ+K  
Sbjct: 69  RLTKEQVDTLEAQFQAHPKPNSNKK----RELAVQTNLSLPRVANWFQNRRAKAKQQKRQ 124

Query: 87  -EASRLQAVNRKLTAMNKLLMEE 108
            E  R+Q   ++    +K + +E
Sbjct: 125 EEFERMQREAKEKEDQSKSIKDE 147


>gi|156552953|ref|XP_001603153.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Nasonia
           vitripennis]
          Length = 458

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 12  SRDSGGQKMIMDNGKYVR----YTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIE 67
           +R + G K    +GK  R       +Q+  L   Y   P+P ++ ++QL+     ++ + 
Sbjct: 221 ARGAAGHKGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVE----MTGLS 276

Query: 68  PKQIKVWFQNRRCREKQRKEASRLQAVNRK 97
           P+ I+VWFQN+RC++K++  A + Q    K
Sbjct: 277 PRVIRVWFQNKRCKDKKKTIAMKQQMQQEK 306


>gi|125605887|gb|EAZ44923.1| hypothetical protein OsJ_29564 [Oryza sativa Japonica Group]
          Length = 362

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 177 KKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 232

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     + + R      + L EEN RLQK++++L    T         AT  +   SCE 
Sbjct: 233 QTEVDCEYLKR----CCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCER 288

Query: 146 V 146
           V
Sbjct: 289 V 289


>gi|363807502|ref|NP_001241886.1| uncharacterized protein LOC100814080 [Glycine max]
 gi|255641240|gb|ACU20897.1| unknown [Glycine max]
          Length = 283

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 22/188 (11%)

Query: 6   SGGSRDSRDSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           S G     +   ++ + D+G     K  R   EQV+ LE+ +    K    R+ QL R  
Sbjct: 53  SSGIEHGEEVNAEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARAL 112

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV- 116
                ++P+QI +WFQNRR R K ++       + R+  A+   N  L  +N +LQ ++ 
Sbjct: 113 ----GLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQYEAVKSDNDALQAQNQKLQAEIL 168

Query: 117 ---SQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHL-TPQQQHQH-----PPRDA 167
              S+   E+    ++T+ + +  + ++S   +  S    + +P   HQ      PP  A
Sbjct: 169 ALKSREPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPHSTHQQSRPLFPPSSA 228

Query: 168 SPAGLLSI 175
            PAG+  +
Sbjct: 229 RPAGVAQL 236


>gi|357483329|ref|XP_003611951.1| Homeodomain-leucine zipper protein [Medicago truncatula]
 gi|355513286|gb|AES94909.1| Homeodomain-leucine zipper protein [Medicago truncatula]
          Length = 143

 Score = 50.4 bits (119), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 10  RDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           R  ++ GG+    D  K  + + EQV  LE  +    K  S ++ +L  E      ++P+
Sbjct: 37  RSKKNKGGENSANDMNKKRKLSDEQVNILEENFGNEHKLESEKKDRLAMEL----GLDPR 92

Query: 70  QIKVWFQNRRCREKQRKEASRLQAV--NRKLTAMNKLLME 107
           Q+ VWFQNRR R K +K      ++  N + T + K L+E
Sbjct: 93  QVAVWFQNRRARWKNKKLEEEYFSLKKNHESTILEKCLLE 132


>gi|425779209|gb|EKV17286.1| Homeobox transcription factor, putative [Penicillium digitatum
           PHI26]
 gi|425779465|gb|EKV17517.1| Homeobox transcription factor, putative [Penicillium digitatum Pd1]
          Length = 703

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 21  IMDNGKYV------RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 74
           IMD  +Y       R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  W
Sbjct: 40  IMDYDEYTENLSRPRLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANW 95

Query: 75  FQNRRCREKQRKEASRLQAV 94
           FQNRR + KQ+K     + +
Sbjct: 96  FQNRRAKAKQQKRQEEFEKM 115


>gi|224111264|ref|XP_002315797.1| predicted protein [Populus trichocarpa]
 gi|222864837|gb|EEF01968.1| predicted protein [Populus trichocarpa]
          Length = 296

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 13/114 (11%)

Query: 14  DSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           +  G+  + D+G     K  R   EQV+ LE+ +    K    R+ QL R       ++P
Sbjct: 64  EGNGEDELSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQP 119

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
           +QI +WFQNRR R K ++       + R+  A+      END LQ Q  +L  E
Sbjct: 120 RQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKA----ENDALQAQNQKLHAE 169


>gi|358392262|gb|EHK41666.1| hypothetical protein TRIATDRAFT_287108 [Trichoderma atroviride IMI
           206040]
          Length = 842

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 380 KRFRLTHQQTRFLTSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 434

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQ 113
               RL A +R      + + ++ D +Q
Sbjct: 435 ----RLNADDRDRMIKMRAVPDDFDNVQ 458


>gi|312379882|gb|EFR26035.1| hypothetical protein AND_08145 [Anopheles darlingi]
          Length = 324

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 92
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 128 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 183

Query: 93  AVNRK 97
               K
Sbjct: 184 MQQEK 188


>gi|198473929|ref|XP_001356494.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
 gi|198138172|gb|EAL33558.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
          Length = 548

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 92
           +Q+  L   Y+  P+P ++ ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 93  AVNRK 97
               K
Sbjct: 307 MQQEK 311


>gi|195147414|ref|XP_002014675.1| GL18825 [Drosophila persimilis]
 gi|194106628|gb|EDW28671.1| GL18825 [Drosophila persimilis]
          Length = 550

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 92
           +Q+  L   Y+  P+P ++ ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 93  AVNRK 97
               K
Sbjct: 307 MQQEK 311


>gi|357113844|ref|XP_003558711.1| PREDICTED: homeobox-leucine zipper protein HOX21-like [Brachypodium
           distachyon]
          Length = 335

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 14/111 (12%)

Query: 9   SRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           S D   +GG+K         R   EQV  LE+ +    K    R+ QL R       ++P
Sbjct: 106 SDDGSQAGGEKK-------RRLNVEQVRTLEKNFELANKLEPERKIQLARAL----GLQP 154

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 116
           +Q+ +WFQNRR R K ++       + R+  A+   N  L+  N +LQ ++
Sbjct: 155 RQVAIWFQNRRARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEI 205


>gi|195433046|ref|XP_002064526.1| GK23894 [Drosophila willistoni]
 gi|194160611|gb|EDW75512.1| GK23894 [Drosophila willistoni]
          Length = 539

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 92
           +Q+  L   Y+  P+P ++ ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 249 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 304

Query: 93  AVNRK 97
               K
Sbjct: 305 MQQEK 309


>gi|166754|gb|AAA32816.1| homeobox protein, partial [Arabidopsis thaliana]
          Length = 100

 Score = 50.4 bits (119), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 5   KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 60

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
              ++   L++   +L +    ++ +ND+L+ +V+ L
Sbjct: 61  QLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSL 97


>gi|380088838|emb|CCC13273.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 724

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 225 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 279

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQ 113
               RL A  R      + + ++ D +Q
Sbjct: 280 ----RLTADERDRVMKMRAVPDDFDNVQ 303


>gi|357501763|ref|XP_003621170.1| Homeobox-leucine zipper-like protein [Medicago truncatula]
 gi|355496185|gb|AES77388.1| Homeobox-leucine zipper-like protein [Medicago truncatula]
          Length = 272

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 13/119 (10%)

Query: 10  RDSRDSGGQKMIMDNG------KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPIL 63
            D  +  G   + D+G      K +R   +QV+ALE+ +    K    R+ QL +     
Sbjct: 58  HDHHEVHGDDELSDDGFQSGEKKKIRLNLDQVQALEKSFEFGNKLDPERKVQLAKAL--- 114

Query: 64  SNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 119
             ++P+QI +WFQNRR R K ++  +  + + +K  A+   N  L   N +LQ ++  L
Sbjct: 115 -GLQPRQIAIWFQNRRARCKTKQLENEYEVLKKKFEAVKDENDALKVHNQKLQGELEAL 172


>gi|389741606|gb|EIM82794.1| hypothetical protein STEHIDRAFT_170978 [Stereum hirsutum FP-91666
           SS1]
          Length = 1316

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 4/56 (7%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
           R +P Q++ LE ++    KPSS+ R+QL  +      + P++++VWFQNRR +EK+
Sbjct: 78  RTSPPQLQRLESVFVVDKKPSSITRKQLAHDL----KMSPREVQVWFQNRRAKEKK 129


>gi|224069752|ref|XP_002326405.1| predicted protein [Populus trichocarpa]
 gi|222833598|gb|EEE72075.1| predicted protein [Populus trichocarpa]
          Length = 121

 Score = 50.4 bits (119), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 8/92 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +Q+E+LE+ + E  K    R+ +L RE      ++P+QI VWFQNRR R K +
Sbjct: 31  KKKRLTSDQLESLEKSFQEEIKLDPDRKMKLSREL----GLQPRQIAVWFQNRRARWKAK 86

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVS 117
           +       + ++  +++K    E  +LQ++V+
Sbjct: 87  QLERLYDNLKQEFDSVSK----EKQKLQEEVN 114


>gi|357129503|ref|XP_003566401.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Brachypodium distachyon]
          Length = 375

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R+  EQ++ LE ++ +CP P    R  L +       +   Q+K WFQNRR  +K + E 
Sbjct: 70  RHRREQIQQLEAVFQQCPHPDEQLRLDLSKRL----GMGLLQVKFWFQNRRSAKKNKME- 124

Query: 89  SRLQAVNRKLTAMNKLLMEENDRLQKQV 116
              Q   +KL   N++L+ EN  ++ ++
Sbjct: 125 ---QQEGKKLREENEMLLAENKAMKAEI 149


>gi|356570520|ref|XP_003553433.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max]
          Length = 292

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 19/145 (13%)

Query: 5   SSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILS 64
           S  G+ D  D  G        K +R + +Q   LE  + E    +  ++  L ++     
Sbjct: 111 SCEGASDEDDENGS-----TRKKLRLSKQQSVFLEESFKEHTTLNPKQKLALAKQL---- 161

Query: 65  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT 124
           N+ P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK++ +L    T
Sbjct: 162 NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKELQELRALKT 217

Query: 125 ---FFRQQTQNAATLATTDTSCESV 146
              FF    Q  AT  T   SCE V
Sbjct: 218 CQPFF---MQLPATTLTMCPSCERV 239


>gi|356530687|ref|XP_003533912.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max]
          Length = 327

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 15/147 (10%)

Query: 8   GSRDSRD----SGGQKMIMDNG---KYVRYTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           GSR+ R+     G      +NG   K +R + EQ   LE  + E    +  ++  L ++ 
Sbjct: 140 GSRNKREQQEAEGRASDDDENGSTRKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQL 199

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
               N+ P+Q++VWFQNRR R K ++     + + R      + L EEN RLQK++ +L 
Sbjct: 200 ----NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLQKELQELR 251

Query: 121 YENTFFRQQTQNAATLATTDTSCESVV 147
              +      Q  AT  T   SCE V 
Sbjct: 252 ALKSSQPFYMQLPATTLTMCPSCERVA 278


>gi|351726046|ref|NP_001237881.1| HDZip I protein [Glycine max]
 gi|62752942|gb|AAX98670.1| HDZip I protein [Glycine max]
          Length = 245

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 8/118 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R + EQV+ LE+ + E  K    R   L +E      ++P+Q+ +WFQNRR R K +
Sbjct: 10  KKRRLSVEQVKFLEKSFDEENKLEPERMIWLAKEL----GLQPRQVAIWFQNRRARWKTK 65

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTD 140
              K+   LQ     L A    L+ E D+L+ +V++L  E    R++ ++    A T+
Sbjct: 66  QMEKDYDSLQTSYNDLKANYDNLLREKDKLKAEVARLT-EKVLGREKNESHLEQAETN 122


>gi|356525608|ref|XP_003531416.1| PREDICTED: homeobox-leucine zipper protein HOX27-like [Glycine max]
          Length = 377

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 31/163 (19%)

Query: 5   SSGGSRDSRDSGGQKMIM-----------DNG------KYVRYTPEQVEALERLYHECPK 47
           S GGS + RD  G+               +NG      K +R + EQ   LE  + E   
Sbjct: 157 SRGGSSNKRDFEGEAYDQRTSSRASDDDDNNGSGGNTRKKLRLSKEQSAFLEESFKEHNT 216

Query: 48  PSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLME 107
            +  ++  L ++     N++P+Q++VWFQNRR R K ++     + + R      + L E
Sbjct: 217 LNPKQKLALAKQL----NLQPRQVEVWFQNRRARTKLKQTEVDCEYLKRCC----ETLTE 268

Query: 108 ENDRLQKQVSQ---LVYENTFFRQQTQNAATLATTDTSCESVV 147
           EN RL K++ +   L   N F+ Q     AT  T   SCE V 
Sbjct: 269 ENRRLHKELQELRALKTSNPFYMQL---PATTLTMCPSCERVA 308


>gi|389627356|ref|XP_003711331.1| hypothetical protein MGG_07437 [Magnaporthe oryzae 70-15]
 gi|351643663|gb|EHA51524.1| hypothetical protein MGG_07437 [Magnaporthe oryzae 70-15]
 gi|440469023|gb|ELQ38150.1| hypothetical protein OOU_Y34scaffold00552g105 [Magnaporthe oryzae
           Y34]
 gi|440483170|gb|ELQ63598.1| hypothetical protein OOW_P131scaffold00967g4 [Magnaporthe oryzae
           P131]
          Length = 714

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 226 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 280

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQ 113
               RL A +R      + + ++ D +Q
Sbjct: 281 ----RLTADDRDRMIKMRAVPDDFDNVQ 304


>gi|296086402|emb|CBI31991.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           + G  D  D G Q       K  R   EQV+ LE+ +    K    R+ QL R       
Sbjct: 59  TNGEDDLSDDGSQA----GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----G 110

Query: 66  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
           ++P+QI +WFQNRR R K ++       + R+  A+      END LQ Q  +L  E
Sbjct: 111 LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAVKA----ENDALQAQNQKLHAE 163


>gi|312282149|dbj|BAJ33940.1| unnamed protein product [Thellungiella halophila]
 gi|312283511|dbj|BAJ34621.1| unnamed protein product [Thellungiella halophila]
          Length = 274

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV  LE+ + +  K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 65  KKRRLTTEQVHLLEKSFEKENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 120

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++   L++   +L +    +++END L+ Q++ L 
Sbjct: 121 QLERDFDLLKSTYDQLLSNYDSIVKENDLLRSQMASLA 158


>gi|350539649|ref|NP_001234233.1| HD-ZIP protein [Solanum lycopersicum]
 gi|992598|emb|CAA62608.1| HD-ZIP protein [Solanum lycopersicum]
          Length = 286

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 25/130 (19%)

Query: 3   AVSSGGSRDSRDSGGQKM---IMDNG------KYVRYTPEQVEALERLYHE----CPKPS 49
           +VS   S D  ++ G++    + D+G      K +R + EQ   LE  + E     PK  
Sbjct: 95  SVSGKRSHDREENEGERATSSLEDDGGDAAARKKLRLSKEQAAVLEETFKEHNTLNPKQK 154

Query: 50  SMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEEN 109
               +QL        N+ P+Q++VWFQNRR R K ++     + + R        L +EN
Sbjct: 155 LALSKQL--------NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCEN----LTDEN 202

Query: 110 DRLQKQVSQL 119
            RLQK+VS+L
Sbjct: 203 RRLQKEVSEL 212


>gi|70982177|ref|XP_746617.1| homeobox transcription factor [Aspergillus fumigatus Af293]
 gi|66844240|gb|EAL84579.1| homeobox transcription factor, putative [Aspergillus fumigatus
           Af293]
 gi|159122147|gb|EDP47269.1| homeobox transcription factor, putative [Aspergillus fumigatus
           A1163]
          Length = 575

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 9/112 (8%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M +SS    D ++S   K      K  R T  Q   L   +     P +  R++L RE P
Sbjct: 166 MGISSDEGGDQKNSSDAKTDKKKMKRFRLTHNQTRFLMSEFTRQAHPDAAHRERLSREIP 225

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQ 113
            L+   P+Q++VWFQNRR + K      RL + +R+    ++ L ++ D  Q
Sbjct: 226 GLT---PRQVQVWFQNRRAKLK------RLTSNDRERMLKSRALPDDFDTTQ 268


>gi|195386470|ref|XP_002051927.1| GJ24442 [Drosophila virilis]
 gi|194148384|gb|EDW64082.1| GJ24442 [Drosophila virilis]
          Length = 529

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 92
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 93  AVNRK 97
               K
Sbjct: 307 MQQEK 311


>gi|345195192|tpg|DAA34961.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414587883|tpg|DAA38454.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 707

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 112/510 (21%), Positives = 201/510 (39%), Gaps = 90/510 (17%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---R 85
           R+T +Q++ LE  +  C  P+   RQ+L  +    + +E +Q+K       C ++    R
Sbjct: 74  RFTMDQIQQLEAQFRVCRHPNLDARQELAAK----TGLEERQVKA------CGDENKGIR 123

Query: 86  KEASRLQAVNRKLTA--MNKLLME-ENDRLQKQVS----QLVYENTFFRQQTQNAATLAT 138
           +E  +L+A N +L    +N +     N  L  Q +    +L+ EN   R +   A     
Sbjct: 124 QELGKLKAENEELKQRMLNPICFRCRNPTLATQPTSEKRRLLNENARLRDEYVRAKAY-- 181

Query: 139 TDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 198
                + ++  G         H H       A L+S AE  + E +  AT     W  +P
Sbjct: 182 ----LDRLIREGAERRASPSAHLHL---GGSATLVSHAERAMEELVMLATKGEPMW--LP 232

Query: 199 GMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLP 258
            M           ++H    V     GL+GL P    E         R   ++ +V+VL 
Sbjct: 233 AMDGE-------TLNHQ-EYVLQTFPGLLGLCPPGFVEEATRESDTIRGT-AMYLVSVLT 283

Query: 259 TGSS------GTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGP 312
             +       GT+  +  +L+  +     R    LR++  L +    + + S+ +   G 
Sbjct: 284 DANQWCEMFPGTVAYMDAELWVQSPRLLNRSVKFLRFSKKLSNRRWAMADVSVVDGVCGV 343

Query: 313 SMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQK 372
               +    R  +LPSG L+    GG   +  V H + +  SVP + RP  +S       
Sbjct: 344 EPGGSSTGCR--LLPSGCLLEDMSGGYCKVTWVVHAEYDETSVPSLFRPFLQSG------ 395

Query: 373 TTMAALRHLRQISQEVSQPSVT-------------------GWGRRPAALRALSQRLSRG 413
             + A R LR + ++    +V                    G GRR  ++  L++R++  
Sbjct: 396 QALGAYRWLRCLQRQCEYITVLRSSLVLPSSSSSFSAISTLGVGRR--SVMELARRMTAS 453

Query: 414 FNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMG-VQLSYVN------GFPSMSNAV 466
           F  A++G      ++  +  +D+  V   S   ++   V+L+  N      G P+++  V
Sbjct: 454 FYAAVSGPV----TVPATSSVDEWRVSSGSGAERVEAVVRLAVWNCADIMPGEPAVT--V 507

Query: 467 LCAKASMLLQDVPPAILLRFL--REHRSEW 494
           L A  ++ L   PP  +  +L   + R EW
Sbjct: 508 LSATTTVWLPGTPPMRVREYLFDLQRRGEW 537


>gi|358248872|ref|NP_001240210.1| uncharacterized protein LOC100813420 [Glycine max]
 gi|255635463|gb|ACU18084.1| unknown [Glycine max]
          Length = 284

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 85
           R + EQV  LE+ + E  K    R+ QL ++      ++P+Q+ VWFQNRR R K +   
Sbjct: 68  RLSSEQVHLLEKSFEEENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTKQLE 123

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           ++   L++    L +    +M+EN++L+ +V  L
Sbjct: 124 RDYDVLKSSYDTLLSSYDSIMKENEKLKSEVVSL 157


>gi|395146480|gb|AFN53636.1| putative homeobox-leucine zipper protein [Linum usitatissimum]
          Length = 252

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 25/147 (17%)

Query: 8   GSRDSRDSGGQKMIMDNG---KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILS 64
           GSR S D        +NG   K +R + +Q   LE  + E    +  ++Q L ++     
Sbjct: 67  GSRASDDD-------ENGSTRKKLRLSKDQSAFLEESFKEHSTLNPKQKQALAKQL---- 115

Query: 65  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT 124
           N+ P+Q++VWFQNRR R K ++     + + R      + L EEN RLQK++ +L    T
Sbjct: 116 NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCC----ETLTEENRRLQKELQELRALKT 171

Query: 125 ----FFRQQTQNAATLATTDTSCESVV 147
               F+    Q  AT  T   SCE V 
Sbjct: 172 NSQPFY---MQPPATTLTMCPSCERVA 195


>gi|312071829|ref|XP_003138788.1| hypothetical protein LOAG_03203 [Loa loa]
 gi|307766042|gb|EFO25276.1| hypothetical protein LOAG_03203 [Loa loa]
          Length = 165

 Score = 50.1 bits (118), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 17/104 (16%)

Query: 30  YTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAS 89
           +T EQ   LE+ +HE   P    +++L     +  NI   +I VWFQNRR   K RK+A 
Sbjct: 30  FTEEQCTTLEKKFHETHYPDQSSKKRL----ALYLNIPEDRIMVWFQNRRA--KWRKQAQ 83

Query: 90  RLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA 133
             Q          + L ++N+R++K    +VYE+T      Q+A
Sbjct: 84  ERQ---------KRYLNKQNERIEKH--SIVYEDTRNEYVIQDA 116


>gi|224140973|ref|XP_002323851.1| predicted protein [Populus trichocarpa]
 gi|222866853|gb|EEF03984.1| predicted protein [Populus trichocarpa]
          Length = 292

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 13/125 (10%)

Query: 17  GQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQI 71
           G+  + D+G     K  R   EQV+ALE+ +    K    R+ QL +       ++P+QI
Sbjct: 64  GEDDLSDDGSQIGEKKKRLNLEQVKALEKSFELGNKLEPERKMQLAKAL----GLQPRQI 119

Query: 72  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQ 131
            +WFQNRR R K ++     + + ++  A    L  +ND LQ Q  +L  E    + +  
Sbjct: 120 AIWFQNRRARWKTKQLEKDYEVLKKQFDA----LKADNDALQAQNKKLHAELLSLKSRES 175

Query: 132 NAATL 136
           N   L
Sbjct: 176 NEVNL 180


>gi|357464079|ref|XP_003602321.1| Homeobox-leucine zipper protein ATHB-7 [Medicago truncatula]
 gi|355491369|gb|AES72572.1| Homeobox-leucine zipper protein ATHB-7 [Medicago truncatula]
          Length = 244

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 86
           R++ EQ+ +LE ++    K    ++ QL R+      ++P+Q+ +WFQNRR R K ++  
Sbjct: 40  RFSDEQIRSLECIFESESKLEPRKKMQLARDL----GLQPRQVAIWFQNRRARWKSKRIE 95

Query: 87  -EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 121
            E  +L+     L +  + L EE + LQ +V +L Y
Sbjct: 96  QEYRKLKDEYDNLASKFQCLKEEKESLQSEVQKLSY 131


>gi|218201267|gb|EEC83694.1| hypothetical protein OsI_29510 [Oryza sativa Indica Group]
          Length = 352

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 172 KKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQL----NLRPRQVEVWFQNRRARTKLK 227

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     + + R      + L EEN RL K++++L    T         AT  +   SCE 
Sbjct: 228 QTEVDCEYLKR----CCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCER 283

Query: 146 VVTS 149
           V ++
Sbjct: 284 VASN 287


>gi|266265608|dbj|BAI49293.1| homeodomain leucine zipper protein class 1 [Hordeum vulgare subsp.
           vulgare]
 gi|266265610|dbj|BAI49294.1| homeodomain leucine zipper protein class 1 [Hordeum vulgare subsp.
           vulgare]
 gi|326512624|dbj|BAJ99667.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score = 50.1 bits (118), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 10/82 (12%)

Query: 17  GQKMIMDNG---KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKV 73
           G  + MD G   K  R T EQVE LE  + E  K  + R+  L  E      ++PKQ+ V
Sbjct: 46  GDGVEMDGGGDPKKRRLTDEQVEGLELSFREERKLETGRKVHLAAEL----GLDPKQVAV 101

Query: 74  WFQNRRCREKQR---KEASRLQ 92
           WFQNRR R K +   +E S+L+
Sbjct: 102 WFQNRRARHKSKLLEEEFSKLK 123


>gi|187609462|sp|A2YW03.2|HOX27_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX27; AltName:
           Full=HD-ZIP protein HOX27; AltName: Full=Homeodomain
           transcription factor HOX27; AltName: Full=OsHox27
          Length = 354

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 174 KKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQL----NLRPRQVEVWFQNRRARTKLK 229

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     + + R      + L EEN RL K++++L    T         AT  +   SCE 
Sbjct: 230 QTEVDCEYLKR----CCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCER 285

Query: 146 VVTS 149
           V ++
Sbjct: 286 VASN 289


>gi|125605524|gb|EAZ44560.1| hypothetical protein OsJ_29180 [Oryza sativa Japonica Group]
          Length = 183

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 8/93 (8%)

Query: 29  RYTPEQVEALERLYHECP-KPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK- 86
           R T EQV ALER + E   K    R+ +L R       I P+Q+ VWFQNRR R K ++ 
Sbjct: 85  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWKTKQL 140

Query: 87  --EASRLQAVNRKLTAMNKLLMEENDRLQKQVS 117
             +  RL+A + +L A    L  +N+ L+ Q S
Sbjct: 141 ELDFDRLRAAHDELLAGRTALAADNESLRSQNS 173


>gi|225441481|ref|XP_002275747.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Vitis
           vinifera]
          Length = 331

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 175 KKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 230

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     + + R      + L EEN RLQK++ +L    T      Q  AT  T   SCE 
Sbjct: 231 QTEVDCEYLKR----CCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCER 286

Query: 146 V 146
           V
Sbjct: 287 V 287


>gi|194758653|ref|XP_001961576.1| GF14867 [Drosophila ananassae]
 gi|190615273|gb|EDV30797.1| GF14867 [Drosophila ananassae]
          Length = 550

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 92
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 253 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 308

Query: 93  AVNRK 97
               K
Sbjct: 309 MQQEK 313


>gi|195484275|ref|XP_002090625.1| GE12696 [Drosophila yakuba]
 gi|194176726|gb|EDW90337.1| GE12696 [Drosophila yakuba]
          Length = 540

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 92
           +Q+  L   Y+  P+P ++ ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 93  AVNRK 97
               K
Sbjct: 307 MQQEK 311


>gi|1076569|pir||S51929 homeotic protein CHB5 - carrot
          Length = 96

 Score = 50.1 bits (118), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R   EQV+ALE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 4   KKRRLNLEQVKALEKSFELGNKLEPERKVQLARAL----GLQPRQIAIWFQNRRARWKTK 59

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           +       + R+  A    L  +ND L+ Q  +L
Sbjct: 60  QLERDYTILKRQFDA----LKADNDSLRTQNKKL 89


>gi|225425754|ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Vitis
           vinifera]
          Length = 285

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           + G  D  D G Q       K  R   EQV+ LE+ +    K    R+ QL R       
Sbjct: 64  TNGEDDLSDDGSQA----GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----G 115

Query: 66  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
           ++P+QI +WFQNRR R K ++       + R+  A+      END LQ Q  +L  E
Sbjct: 116 LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAVKA----ENDALQAQNQKLHAE 168


>gi|357486709|ref|XP_003613642.1| Homeobox-leucine zipper protein [Medicago truncatula]
 gi|355514977|gb|AES96600.1| Homeobox-leucine zipper protein [Medicago truncatula]
          Length = 283

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 12/123 (9%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQL 56
           M+ SSG       +  ++ + D+G     K  R   EQV+ LE+ +    K    R+ QL
Sbjct: 48  MSFSSGIELGEEANIPEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQL 107

Query: 57  IRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQ 113
            R      N++P+Q+ +WFQNRR R K ++       + R+  A+   N  L  +N +LQ
Sbjct: 108 ARAL----NLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQYDAIKLDNDALQAQNQKLQ 163

Query: 114 KQV 116
            ++
Sbjct: 164 AEI 166


>gi|119486901|ref|XP_001262370.1| homeobox transcription factor, putative [Neosartorya fischeri NRRL
           181]
 gi|119410527|gb|EAW20473.1| homeobox transcription factor, putative [Neosartorya fischeri NRRL
           181]
          Length = 509

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 9/112 (8%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECP 61
           M +SS    D ++S   K      K  R T  Q   L   +     P +  R++L RE P
Sbjct: 100 MGISSDEGGDQKNSSDAKTDKKKMKRFRLTHNQTRFLMSEFTRQAHPDAAHRERLSREIP 159

Query: 62  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQ 113
            L+   P+Q++VWFQNRR + K      RL + +R+    ++ L ++ D  Q
Sbjct: 160 GLT---PRQVQVWFQNRRAKLK------RLTSNDRERMLKSRALPDDFDTTQ 202


>gi|75131008|sp|Q6YPD0.1|HOX27_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX27; AltName:
           Full=HD-ZIP protein HOX27; AltName: Full=Homeodomain
           transcription factor HOX27; AltName: Full=OsHox27
 gi|46804964|dbj|BAD17827.1| putative homeobox-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|222640698|gb|EEE68830.1| hypothetical protein OsJ_27606 [Oryza sativa Japonica Group]
          Length = 354

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 174 KKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQL----NLRPRQVEVWFQNRRARTKLK 229

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     + + R      + L EEN RL K++++L    T         AT  +   SCE 
Sbjct: 230 QTEVDCEYLKR----CCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCER 285

Query: 146 VVTS 149
           V ++
Sbjct: 286 VASN 289


>gi|115440077|ref|NP_001044318.1| Os01g0760800 [Oryza sativa Japonica Group]
 gi|31339111|dbj|BAC77162.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113533849|dbj|BAF06232.1| Os01g0760800, partial [Oryza sativa Japonica Group]
          Length = 134

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 27  YVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 86
           Y R+T EQ+  +E L+ E P P   +RQQ+ ++      +  +Q+K WFQNRR + K+R 
Sbjct: 4   YHRHTAEQIRIMEALFKESPHPDERQRQQVSKQL----GLSARQVKFWFQNRRTQIKERH 59

Query: 87  EASRLQAVNRKLTAMNKLLME 107
           E S L++   KL   ++ + E
Sbjct: 60  ENSLLKSELEKLQDEHRAMRE 80


>gi|224119128|ref|XP_002317992.1| predicted protein [Populus trichocarpa]
 gi|222858665|gb|EEE96212.1| predicted protein [Populus trichocarpa]
          Length = 268

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 8/118 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +QV+ LER +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 40  KKRRLTVDQVQFLERSFEVENKLEPERKIQLAKDL----GLQPRQVAIWFQNRRARWKTK 95

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTD 140
              K+   LQ+    L A    L +E ++L+ +V+ L  E    +++ + ++ L+  D
Sbjct: 96  QLEKDYEVLQSSYNGLKADYDNLFKEKEKLKAEVNLLTNE-LLLKEKEKGSSELSDKD 152


>gi|302398823|gb|ADL36706.1| HD domain class transcription factor [Malus x domestica]
          Length = 289

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R T EQ   LE  + +    +  ++Q L R+     N+ P+Q++VWFQNRR R K +
Sbjct: 145 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQL----NLRPRQVEVWFQNRRARTKLK 200

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           +     + + +      + L +EN RLQK++ +L
Sbjct: 201 QTEVDCEFLKK----CCETLTDENRRLQKELQEL 230


>gi|357113670|ref|XP_003558624.1| PREDICTED: homeobox-leucine zipper protein HOX13-like [Brachypodium
           distachyon]
          Length = 315

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 8/120 (6%)

Query: 24  NGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 83
            GK  R   EQV ALER +    K    R+ ++ R+  +    +P+Q+ VWFQNRR R K
Sbjct: 52  GGKKRRLALEQVRALERSFEVDNKLDPERKARIARDLAL----QPRQVAVWFQNRRARWK 107

Query: 84  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSC 143
            ++    L+     L A +  L  + D L++    L  E    R++       A    +C
Sbjct: 108 TKQ----LERDFNALRARHDALRSDCDALRRDKDALAAEIRELREKLPKPEAAAVKSEAC 163


>gi|388504336|gb|AFK40234.1| unknown [Lotus japonicus]
          Length = 256

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 12/123 (9%)

Query: 2   MAVSSGGSRDSRDSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQL 56
           M+ SSG       +  ++ + D+G     K  R   EQV+ LE+ +    K    R+ QL
Sbjct: 21  MSFSSGIEHGEEANNAEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQL 80

Query: 57  IRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQ 113
            R       ++P+QI +WFQNRR R K ++       + R+  A+   N  L   N +LQ
Sbjct: 81  ARAL----GLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYDAIKSDNDALQAHNQKLQ 136

Query: 114 KQV 116
            ++
Sbjct: 137 AEI 139


>gi|310792453|gb|EFQ27980.1| homeobox domain-containing protein [Glomerella graminicola M1.001]
          Length = 666

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 203 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 257

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQ 113
               RL A +R      + + ++ D +Q
Sbjct: 258 ----RLTADDRDRMIKMRAVPDDFDNIQ 281


>gi|7415624|dbj|BAA93465.1| homeobox protein PpHB6 [Physcomitrella patens]
          Length = 345

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +QV +LER +    K    R+ QL +E      + P+Q+ VWFQNRR R K +
Sbjct: 99  KKRRLTFDQVRSLERNFEMENKLEPERKMQLAKEL----GLRPRQVAVWFQNRRARWKTK 154

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
              ++   L A  + L     L++ E + L+ +V +L
Sbjct: 155 QLERDYEALAADYKSLKHDYDLVLAEKNNLKAEVQRL 191


>gi|168033004|ref|XP_001769007.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679762|gb|EDQ66205.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 345

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +QV +LER +    K    R+ QL +E      + P+Q+ VWFQNRR R K +
Sbjct: 99  KKRRLTFDQVRSLERNFEMENKLEPERKMQLAKEL----GLRPRQVAVWFQNRRARWKTK 154

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
              ++   L A  + L     L++ E + L+ +V +L
Sbjct: 155 QLERDYEALAADYKSLKHDYDLVLAEKNNLKAEVQRL 191


>gi|302909385|ref|XP_003050061.1| hypothetical protein NECHADRAFT_49051 [Nectria haematococca mpVI
           77-13-4]
 gi|256730998|gb|EEU44348.1| hypothetical protein NECHADRAFT_49051 [Nectria haematococca mpVI
           77-13-4]
          Length = 449

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 155 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 209

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQ 113
               RL A +R      + + E  D +Q
Sbjct: 210 ----RLNADDRDRMIKMRAVPEGFDNVQ 233


>gi|225450315|ref|XP_002268178.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Vitis
           vinifera]
          Length = 358

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 17/130 (13%)

Query: 23  DNG---KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRR 79
           DNG   K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR
Sbjct: 196 DNGLTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQL----NLRPRQVEVWFQNRR 251

Query: 80  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ---LVYENTFFRQQTQNAATL 136
            R K ++     + + R      + L EEN RL K++ +   L   N F+    Q  AT 
Sbjct: 252 ARTKLKQTEVDCEYLKR----CCETLTEENRRLHKELQELRALKTSNPFY---MQLPATT 304

Query: 137 ATTDTSCESV 146
            T   SCE V
Sbjct: 305 LTMCPSCERV 314


>gi|209171581|gb|ACI42911.1| tendril-less [Pisum sativum]
 gi|209171583|gb|ACI42912.1| tendril-less [Pisum sativum]
          Length = 237

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 15/86 (17%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 90
           T  QV+ALER +HE  K    R+ +L  E      ++P+Q+ VWFQNRR R K       
Sbjct: 78  TSNQVDALERSFHEEIKLDPERKMKLSAEL----GLQPRQVAVWFQNRRTRWK------- 126

Query: 91  LQAVNRKLTAMNKLLMEENDRLQKQV 116
                ++L     +L +EN +LQ++V
Sbjct: 127 ----TKQLEHSYDVLKQENQKLQEEV 148


>gi|116787512|gb|ABK24536.1| unknown [Picea sitchensis]
          Length = 358

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 21/143 (14%)

Query: 11  DSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQ 70
           D  + GG +      K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q
Sbjct: 189 DEEEGGGTR------KKLRLSKEQSAYLEESFKEHNTLNPKQKLALAKQL----NLRPRQ 238

Query: 71  IKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL----VYENTFF 126
           ++VWFQNRR R K ++     + + R      + L EEN RLQK + +L    V   +F+
Sbjct: 239 VEVWFQNRRARTKLKQTEVDCEYLKR----CYETLTEENRRLQKDIQELRALKVAHPSFY 294

Query: 127 RQQTQNAATLATTDTSCESVVTS 149
                  AT  T   SCE + ++
Sbjct: 295 MHL---PATTLTMCPSCERIASA 314


>gi|225455262|ref|XP_002271523.1| PREDICTED: homeobox-leucine zipper protein ATHB-12 [Vitis vinifera]
 gi|302143960|emb|CBI23065.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score = 49.7 bits (117), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 86
           R++ EQV+ LE ++    K  + ++++L  E      ++P+Q+ +WFQN+R R K ++  
Sbjct: 28  RFSDEQVQYLESIFESDSKLEARKKEELAVEL----GMQPRQVAIWFQNKRARWKSKQIE 83

Query: 87  -EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
            +   L+A    LT+  + L EE   L  Q+ +L
Sbjct: 84  HDYKALRASYDALTSRFESLKEEKQSLLTQLQKL 117


>gi|356498410|ref|XP_003518045.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max]
          Length = 329

 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 14/143 (9%)

Query: 5   SSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILS 64
           + G + D  ++G  +      K +R + EQ   LE  + E    +  ++  L ++     
Sbjct: 155 AEGRASDDDENGSTR------KKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQL---- 204

Query: 65  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT 124
           N+ P+Q++VWFQNRR R K ++     + + R      + L EEN RLQK++ +L    T
Sbjct: 205 NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLQKELQELRALKT 260

Query: 125 FFRQQTQNAATLATTDTSCESVV 147
                 Q  AT  T   SCE V 
Sbjct: 261 SQPFYMQLPATTLTMCPSCERVA 283


>gi|187471150|sp|A2Z1U1.1|HOX11_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX11; AltName:
           Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain
           transcription factor HOX11; AltName: Full=OsHox11
 gi|125563922|gb|EAZ09302.1| hypothetical protein OsI_31575 [Oryza sativa Indica Group]
          Length = 276

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 90  KKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 145

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     + + R      + L EEN RLQK++++L    T         AT  +   SCE 
Sbjct: 146 QTEVDCEYLKR----CCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCER 201

Query: 146 V 146
           V
Sbjct: 202 V 202


>gi|449464246|ref|XP_004149840.1| PREDICTED: homeobox-leucine zipper protein HAT22-like [Cucumis
           sativus]
 gi|449518661|ref|XP_004166355.1| PREDICTED: homeobox-leucine zipper protein HAT22-like [Cucumis
           sativus]
          Length = 273

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 8/126 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + +Q   LE  + +    +  ++Q L R+     N+ P+Q++VWFQNRR R K +
Sbjct: 123 KKLRLSKQQSALLEESFKQNSTLNPKQKQGLARQL----NLLPRQVEVWFQNRRARTKVK 178

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     +     L    + L +EN RLQK+V +L           Q +    T   SCE 
Sbjct: 179 QTEVDCEL----LKKCCETLTDENRRLQKEVQELKAIKLAKPVYMQMSGATLTICPSCER 234

Query: 146 VVTSGQ 151
           V T G 
Sbjct: 235 VGTGGH 240


>gi|224124266|ref|XP_002319288.1| predicted protein [Populus trichocarpa]
 gi|222857664|gb|EEE95211.1| predicted protein [Populus trichocarpa]
          Length = 438

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 115/282 (40%), Gaps = 33/282 (11%)

Query: 220 AARACGLVGLDPTRVAEILKDRPSWYRDCRSV----EVVNVLPTGSSG----TIELLYMQ 271
           A+R  G V +D T + E L D   W     ++     V+ VL  G +G    T++++  +
Sbjct: 77  ASRHIGFVRMDATSLVECLMDVKQWSSVFSNIVSRTTVLGVLSRGVAGNYNETLQVMKAE 136

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
            + PT L   R+    RY   +  G+  V + SL++    P        V     PSG L
Sbjct: 137 FHMPTPLVNIRESQFARYCKQIGPGTWGVVDVSLDSLFPYP-------LVIFRRRPSGCL 189

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPL-YESSTLIAQKTTMAALRHLRQISQEVSQ 390
           I     G S +  V+H++++   V  +  P+        A +   + +RH   +   +S 
Sbjct: 190 IVEMPDGYSKVIWVEHVEVDNKFVHRMFWPIVLPGFAFSAMRWVASIVRHCEPVGNIIST 249

Query: 391 P--SVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV-NSSPSK 447
              S T       ++  L++R+ R F    +  TD  W          V +H+ +    +
Sbjct: 250 SLDSATIPRNGKTSVLRLARRMMRSFYHDNSASTDNFW----------VRIHLCDGEDFR 299

Query: 448 MMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLRE 489
           +M   +  +NG PS   + L    S+ +   PP  +  FLR 
Sbjct: 300 LMTKTIYALNGSPS---STLVFTTSLWVP-APPKRVFDFLRH 337


>gi|1708565|sp|P53409.1|ISL3_ONCTS RecName: Full=Insulin gene enhancer protein ISL-3; Short=Islet-3
          Length = 363

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 36/53 (67%), Gaps = 4/53 (7%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Q+  L   Y+  P+P ++ R+QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 201 KQLHTLRTCYNANPRPDALMREQLVE----MTGLSPRVIRVWFQNKRCKDKKR 249


>gi|358389639|gb|EHK27231.1| hypothetical protein TRIVIDRAFT_117070, partial [Trichoderma virens
           Gv29-8]
          Length = 322

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 157 KRFRLTHQQTRFLTSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 211

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQ 113
               RL A +R      + + ++ D +Q
Sbjct: 212 ----RLNADDRDRMIKMRAVPDDFDNVQ 235


>gi|327291516|ref|XP_003230467.1| PREDICTED: LIM/homeobox protein Lhx3-like, partial [Anolis
           carolinensis]
          Length = 314

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 24/160 (15%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 90
           T +Q+E L+  Y+  PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ K+ + 
Sbjct: 81  TAKQLETLKSAYNNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 136

Query: 91  LQAVNRKLTAMNKLL---MEENDRLQKQ---------------VSQLVYENTFFRQQTQN 132
            Q   +    M +       + D +Q++               +S++ + N  +    +N
Sbjct: 137 RQRWGQYFRNMKRSRGNSKSDKDSIQEEGPESDAEVSFTDEPSISEMSHSNGLYGNLGEN 196

Query: 133 AATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGL 172
           +  L     +  S   S +H   P Q   H  R  SP G+
Sbjct: 197 SPALGRQAGTNSSF--SLEHPGIPAQDQYHDLRSNSPYGM 234


>gi|225452490|ref|XP_002278872.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Vitis
           vinifera]
          Length = 273

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 65  KKRRLTPEQVHLLEKSFEAENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 120

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++   L++    L +    +++E ++L+ +V  L 
Sbjct: 121 QLERDYDLLKSSYDSLVSEYDSILKEKEKLKSEVVSLT 158


>gi|147780460|emb|CAN74911.1| hypothetical protein VITISV_007605 [Vitis vinifera]
          Length = 715

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 35/227 (15%)

Query: 220 AARACGLVGLDPTRVAEILKDR----PSWYRDCRSVEVVNVLPTGS----SGTIELLYMQ 271
           A+R    +  DP  + E+L +     P +       +V+ VL T +    +G ++++ ++
Sbjct: 293 ASRETRFLLADPVHIVELLMNNDQYSPVFSNIVSKSKVLGVLSTQAQGDYNGALQVMAVE 352

Query: 272 LYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYL 331
            +AP+ L P R+ +L RY+  L +    V + SL +    P        +R +  PSG L
Sbjct: 353 FHAPSPLVPNRECYLARYSRCLSNNVWGVVDVSLESLFPNP-------LIRYQRRPSGCL 405

Query: 332 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYES----------STLIAQ--KTTMAALR 379
           J   +     +  V+H +++  SVPEV +    S          STL+ Q  + T   +R
Sbjct: 406 JEQFQXRLCKVIWVEHSEVDNSSVPEVCQHFVTSGHAYGAKQWLSTLVRQHERLTYIMVR 465

Query: 380 HLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGW 426
           + R+  Q V     TG       L  L+ R+ R F   L+      W
Sbjct: 466 NDRRPQQLVP----TG----EENLLTLADRMMRSFWRNLSASRKNQW 504


>gi|209171591|gb|ACI42916.1| tendril-less [Vicia sativa]
          Length = 237

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 15/89 (16%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 90
           T  QV+ALER +HE  K    R+ +L  E      ++P+Q+ VWFQNRR R K       
Sbjct: 78  TSNQVDALERSFHEEIKLDPERKMKLSAEL----GLQPRQVAVWFQNRRTRWK------- 126

Query: 91  LQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
                ++L     +L +EN +LQ +V  L
Sbjct: 127 ----TKQLEQDYDVLKQENQKLQDEVMTL 151


>gi|297739823|emb|CBI30005.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 11/127 (8%)

Query: 23  DNG---KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRR 79
           +NG   K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR
Sbjct: 88  ENGSTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQL----NLRPRQVEVWFQNRR 143

Query: 80  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATT 139
            R K ++     + + R      + L EEN RLQK++ +L    T      Q  AT  T 
Sbjct: 144 ARTKLKQTEVDCEYLKR----CCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTM 199

Query: 140 DTSCESV 146
             SCE V
Sbjct: 200 CPSCERV 206


>gi|157119485|ref|XP_001653405.1| insulinprotein enhancer protein isl [Aedes aegypti]
 gi|108883188|gb|EAT47413.1| AAEL001500-PA, partial [Aedes aegypti]
          Length = 398

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 92
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 211 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 266

Query: 93  AVNRK 97
               K
Sbjct: 267 MQQEK 271


>gi|47225812|emb|CAF98292.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 360

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 4/55 (7%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           T +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ ++VWFQN+RC++K+R
Sbjct: 199 TEKQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVVRVWFQNKRCKDKKR 249


>gi|140052423|gb|ABE80119.2| Homeodomain-related [Medicago truncatula]
          Length = 142

 Score = 49.7 bits (117), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 10/118 (8%)

Query: 1   MMAVSSGGSRDSRDSGGQKMIM--DNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIR 58
           MM V      D+     +KM+   +  K  R T EQ+E+LE  + E  K    R+ +L +
Sbjct: 32  MMEVKHQDWTDTMFPEMEKMMKYGNQEKKKRLTSEQMESLESSFQEEIKLDPQRKMKLSK 91

Query: 59  ECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV 116
           E      ++P+QI +WFQNRR R K ++    L+ +   L    +++ +E  +LQ +V
Sbjct: 92  EL----GLQPRQIAIWFQNRRARWKTKQ----LEHLYDSLRHQFEVVSKEKQQLQDEV 141


>gi|357140248|ref|XP_003571682.1| PREDICTED: homeobox-leucine zipper protein HOX15-like [Brachypodium
           distachyon]
          Length = 239

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 24/133 (18%)

Query: 26  KYVRYTPEQVEALERLYHE----CPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           K +R T EQ   LE  + E     PK  ++  +QL        N+ P+Q++VWFQNRR R
Sbjct: 98  KKLRLTKEQSALLEDRFKEHSTLNPKQKAVLARQL--------NLRPRQVEVWFQNRRAR 149

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV----YENTFFRQQTQNAATLA 137
            K ++     + + R      + L EEN RL ++++ L     + + FF      AATL+
Sbjct: 150 TKLKQTEVDCEVLKR----CCETLTEENRRLHRELNNLRAIHHHHSAFF---VPAAATLS 202

Query: 138 TTDTSCESVVTSG 150
               SC+ +  +G
Sbjct: 203 VCP-SCDRLAATG 214


>gi|328707559|ref|XP_001944557.2| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
           [Acyrthosiphon pisum]
          Length = 513

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 38/60 (63%), Gaps = 4/60 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 92
           +Q+  L   Y   P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+R  A + Q
Sbjct: 333 KQLHTLRTCYSANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKRAIALKQQ 388


>gi|290971370|ref|XP_002668481.1| predicted protein [Naegleria gruberi]
 gi|290982470|ref|XP_002673953.1| predicted protein [Naegleria gruberi]
 gi|284081909|gb|EFC35737.1| predicted protein [Naegleria gruberi]
 gi|284087540|gb|EFC41209.1| predicted protein [Naegleria gruberi]
          Length = 218

 Score = 49.7 bits (117), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 12/146 (8%)

Query: 226 LVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFW 285
           + GL P +VA +L D     +   S+  +  L       IE++     +P      RD+ 
Sbjct: 59  MSGLTPEQVANVLWDSNHVLKLSTSLSEIKSLKKVED--IEVVVHSHKSPAFGVSKRDYL 116

Query: 286 LLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPC----EGGGSI 341
           + R     EDGS+V+C++S+    +    P+   +VR ++L SGY+I+P     E   + 
Sbjct: 117 ICRRLKKREDGSIVLCQKSV---VDNALYPEQSGYVRGDLLVSGYVIKPVKKPNETTATS 173

Query: 342 IHI--VDHMDLEPWSVPEVLRPLYES 365
            H+  V   D++ W +P+ ++ +  S
Sbjct: 174 CHVTYVIQTDVKGW-IPDFVKKMANS 198


>gi|410908008|ref|XP_003967483.1| PREDICTED: insulin gene enhancer protein ISL-2A-like [Takifugu
           rubripes]
          Length = 359

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 4/55 (7%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           T +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ ++VWFQN+RC++K+R
Sbjct: 199 TEKQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVVRVWFQNKRCKDKKR 249


>gi|356548619|ref|XP_003542698.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Glycine max]
          Length = 285

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R + EQV  LE+ + E  K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 66  KKHRLSSEQVHLLEKNFEEENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 121

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
              ++   L++    L +    +M+EN++L+ +V  L
Sbjct: 122 QLERDYDVLKSSYDTLLSSYDSIMKENEKLKSEVVSL 158


>gi|158299279|ref|XP_319393.4| AGAP010209-PA [Anopheles gambiae str. PEST]
 gi|157014289|gb|EAA13793.5| AGAP010209-PA [Anopheles gambiae str. PEST]
          Length = 451

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 92
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 254 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 309

Query: 93  AVNRK 97
               K
Sbjct: 310 MQQEK 314


>gi|255558168|ref|XP_002520111.1| homeobox protein, putative [Ricinus communis]
 gi|223540603|gb|EEF42166.1| homeobox protein, putative [Ricinus communis]
          Length = 296

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 14  DSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           ++ G+  + D+G     K  R   EQV+ LE+ +    K    R+ QL R       ++P
Sbjct: 66  EANGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQP 121

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFF-- 126
           +QI +WFQNRR R K ++       + R+  A    +  +ND LQ Q  +L  E      
Sbjct: 122 RQIAIWFQNRRARWKTKQLEKDYDLLKRQFEA----IKADNDALQAQNQKLHAEIMALKS 177

Query: 127 RQQTQNAATLATTDTSC 143
           R+ T++      T+ SC
Sbjct: 178 REPTESINLNKETEGSC 194


>gi|449447319|ref|XP_004141416.1| PREDICTED: homeobox-leucine zipper protein HAT22-like [Cucumis
           sativus]
          Length = 261

 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R T  Q   LE  + E    S  ++Q L R+     N+ P+Q++VWFQNRR R K +
Sbjct: 110 KKLRLTKHQSAILEDNFKEHSSLSPKQKQDLARQL----NLRPRQVEVWFQNRRARTKLK 165

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           +     + + +        L EEN RLQK++ +L
Sbjct: 166 QTEMDCELLKKCCEK----LKEENTRLQKELQEL 195


>gi|449266486|gb|EMC77539.1| LIM/homeobox protein Lhx4, partial [Columba livia]
          Length = 236

 Score = 49.7 bits (117), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 89
           T +Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 140 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 195

Query: 90  R 90
           R
Sbjct: 196 R 196


>gi|307715374|gb|ADN88094.1| homeodomain-leucine zipper protein HD3 [Gossypium hirsutum]
          Length = 254

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 49  KKRRLTSEQVYLLEKSFEAENKLEPERKSQLAKKL----GLQPRQVAVWFQNRRARWKTK 104

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++   L++    L +    +++EN++L+ +V+ L 
Sbjct: 105 QLERDYDLLKSSFDSLQSNYDTILKENEKLKSEVASLT 142


>gi|156398319|ref|XP_001638136.1| predicted protein [Nematostella vectensis]
 gi|156225254|gb|EDO46073.1| predicted protein [Nematostella vectensis]
          Length = 329

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 9/89 (10%)

Query: 6   SGGSRDSR---DSGGQKMIMDNGKYVR--YTPEQVEALERLYHECPKPSSMRRQQLIREC 60
           SGG  + +   DS   K   D    VR     +Q+  L   Y+  P+P +M ++QL+   
Sbjct: 158 SGGQTNGQTTPDSTPSKRKTDRPTRVRTVLNEKQLHTLRTCYNANPRPDAMMKEQLVE-- 215

Query: 61  PILSNIEPKQIKVWFQNRRCREKQRKEAS 89
             ++ + P+ I+VWFQN+RC++K++   S
Sbjct: 216 --MTGLSPRVIRVWFQNKRCKDKKKNPNS 242


>gi|541872|pir||B44088 homeotic protein HAT5 - Arabidopsis thaliana (fragments)
          Length = 116

 Score = 49.3 bits (116), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 4   KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 59

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
           ++ + +   NR+     K L  + D L+    QL+
Sbjct: 60  QQVA-VWFQNRRARWKTKQLERDYDLLKSTYDQLL 93


>gi|390339027|ref|XP_781774.3| PREDICTED: insulin gene enhancer protein ISL-1-like
           [Strongylocentrotus purpuratus]
          Length = 402

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 15/106 (14%)

Query: 12  SRDSGGQKMIMDNGKYVR----YTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIE 67
           +R S G+  +    K  R       +Q+  L   Y   P+P ++ ++QL+     ++ + 
Sbjct: 198 NRTSSGRSHVHKQEKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVE----MTQLS 253

Query: 68  PKQIKVWFQNRRCREKQR----KEASRLQAV---NRKLTAMNKLLM 106
           P+ I+VWFQN+RC++K+R    K+ +  QA    NR++ + N + M
Sbjct: 254 PRVIRVWFQNKRCKDKKRTVLMKQIADQQASKDPNRRVQSFNGVPM 299


>gi|356528154|ref|XP_003532670.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 793

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 22/104 (21%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R+  ++V  LE ++ EC  P+ +RR+Q+  E      ++P+Q+K WFQN++         
Sbjct: 23  RHGRDKVARLEEIFKECTHPNEVRRRQIGEEL----GLDPEQVKFWFQNKK--------- 69

Query: 89  SRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQN 132
           + ++ +N +L      L  EN+R+Q        EN   R+  +N
Sbjct: 70  THIRTINERLDT--DALRLENERIQS-------ENNKMRETLEN 104


>gi|350595734|ref|XP_003360394.2| PREDICTED: stAR-related lipid transfer protein 8-like [Sus scrofa]
          Length = 563

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 20/192 (10%)

Query: 165 RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
           R A  AG+ LS+  EE++ E L  A      W+ +PG  P    +       G      +
Sbjct: 347 RQARAAGVSLSLYMEESVQELLRDAAERFKGWMSVPG--PQHTELACKKAPDGHPLRVWK 404

Query: 223 ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
           A   V   P  V   +L++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 405 ASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPH 457

Query: 281 -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
             RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 458 PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRALMLTSQYLMEPCGLG 512

Query: 339 GSIIHIVDHMDL 350
            S +  +   DL
Sbjct: 513 RSRLTHICRADL 524


>gi|297718718|gb|ADI50270.1| type II homeodomain-leucine zipper protein [Medicago sativa]
          Length = 340

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + +Q   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 201 KKLRLSKDQSAFLEESFKEHHTLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 256

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     + + R      + L EEN RL K++ +L    T      Q  AT  T   SCE 
Sbjct: 257 QTEVDCEYLKRCC----ETLTEENRRLHKELQELRALKTSNPFNMQLPATTLTMCPSCER 312

Query: 146 VVTS 149
           V T+
Sbjct: 313 VATN 316


>gi|357477401|ref|XP_003608986.1| Homeobox-leucine zipper protein ATHB-6 [Medicago truncatula]
 gi|217073494|gb|ACJ85107.1| unknown [Medicago truncatula]
 gi|355510041|gb|AES91183.1| Homeobox-leucine zipper protein ATHB-6 [Medicago truncatula]
 gi|388499834|gb|AFK37983.1| unknown [Medicago truncatula]
          Length = 337

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R + +QV+ LE+ + E  K    R+ +L ++      ++P+Q+ +WFQNRR R K +
Sbjct: 95  KKRRLSVDQVQFLEKSFEEDNKLEPERKTKLAKDL----GLQPRQVAIWFQNRRARWKTK 150

Query: 86  KEASRLQAVN---RKLTAMNKLLMEENDRLQKQVSQLV 120
           +      ++N     L      L++E DRLQ +V+ L 
Sbjct: 151 QLEKDYDSLNDGYESLKTEYDNLLKEKDRLQSEVASLT 188


>gi|449449152|ref|XP_004142329.1| PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis
           sativus]
          Length = 197

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 13/104 (12%)

Query: 21  IMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           I +NG     K +R T EQ   LE+ + +    + ++++ L      +  ++P+QI+VWF
Sbjct: 57  INNNGSNNPRKKLRLTKEQSHLLEQSFRQNHTLNPVQKETLAE----VLKLKPRQIEVWF 112

Query: 76  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           QNRR R K ++     + + R       LL E+N RLQK+V +L
Sbjct: 113 QNRRARSKLKQTEMECEYLKRWFG----LLTEQNKRLQKEVEEL 152


>gi|78190375|gb|ABB29578.1| ISL-LIM class homeobox protein [Nematostella vectensis]
 gi|110339149|gb|ABG67838.1| ISL, partial [Nematostella vectensis]
          Length = 60

 Score = 49.3 bits (116), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 36/53 (67%), Gaps = 4/53 (7%)

Query: 33 EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
          +Q+  L   Y+  P+P +M ++QL+     ++ + P+ I+VWFQN+RC++K++
Sbjct: 11 KQLHTLRTCYNANPRPDAMMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKK 59


>gi|37909278|gb|AAP37131.1| WOX2 protein [Arabidopsis thaliana]
          Length = 260

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 31  TPEQVEALERLYHECPK-PSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAS 89
           T +Q+  LE LY E  + PS+ + QQ+        +IE K +  WFQN + R++Q+++  
Sbjct: 18  TKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQKQKQE 77

Query: 90  RLQAVNRKLTAMNKLL 105
           R+   NR L   ++  
Sbjct: 78  RMAYFNRLLHKTSRFF 93


>gi|15228625|ref|NP_191748.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|75182677|sp|Q9M276.1|ATB12_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-12; AltName:
           Full=HD-ZIP protein ATHB-12; AltName: Full=Homeodomain
           transcription factor ATHB-12
 gi|6899887|emb|CAB71896.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|16648917|gb|AAL24310.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|21592794|gb|AAM64743.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|25084309|gb|AAN72217.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|332646754|gb|AEE80275.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
          Length = 235

 Score = 49.3 bits (116), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 53/94 (56%), Gaps = 7/94 (7%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 85
           R++ EQ+++LE ++    +    ++ Q+ RE      ++P+Q+ +WFQN+R R K +   
Sbjct: 33  RFSEEQIKSLELIFESETRLEPRKKVQVAREL----GLQPRQVAIWFQNKRARWKTKQLE 88

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           KE + L+A    L +  +++ +E   L  ++ +L
Sbjct: 89  KEYNTLRANYNNLASQFEIMKKEKQSLVSELQRL 122


>gi|449269080|gb|EMC79889.1| LIM/homeobox protein Lhx3, partial [Columba livia]
          Length = 342

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 24/160 (15%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 90
           T +Q+E L+  Y+  PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ K+ + 
Sbjct: 109 TAKQLETLKNAYNNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 164

Query: 91  LQAVNRKLTAMNK---LLMEENDRLQKQ---------------VSQLVYENTFFRQQTQN 132
            Q   +    M +       + D +Q++               +S++ + N  +    + 
Sbjct: 165 RQRWGQYFRNMKRSRGTSKSDKDSIQEEGPDSDAEVSFTDEPSMSEMSHSNGIYNNLNEA 224

Query: 133 AATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGL 172
           +  L     +  S      H   P Q   H  R  SP G+
Sbjct: 225 SPALGRQAGTNGSFTLD--HSGIPAQDQYHDLRSTSPYGI 262


>gi|74228915|dbj|BAE21930.1| unnamed protein product [Mus musculus]
          Length = 1019

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 83/192 (43%), Gaps = 20/192 (10%)

Query: 165 RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
           R A  AG+ LS+  EE++ E L  A      W  +PG  P    +       G      +
Sbjct: 803 RQAQAAGVSLSLYMEESVQELLRDAAERFKGWTNVPG--PQHTELACRKAPDGHPLRMWK 860

Query: 223 ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
           A   V   P  V   +L++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 861 ASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPH 913

Query: 281 -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
             RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 914 PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRALMLTSQYLMEPCGLG 968

Query: 339 GSIIHIVDHMDL 350
            S +  +   DL
Sbjct: 969 RSRLTHICRADL 980


>gi|39841035|ref|NP_950183.1| stAR-related lipid transfer protein 8 [Mus musculus]
 gi|84028267|sp|Q8K031.2|STAR8_MOUSE RecName: Full=StAR-related lipid transfer protein 8; AltName:
           Full=START domain-containing protein 8; Short=StARD8
 gi|38614395|gb|AAH62944.1| START domain containing 8 [Mus musculus]
 gi|74207985|dbj|BAE29110.1| unnamed protein product [Mus musculus]
 gi|74213999|dbj|BAE29418.1| unnamed protein product [Mus musculus]
          Length = 1019

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 83/192 (43%), Gaps = 20/192 (10%)

Query: 165 RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
           R A  AG+ LS+  EE++ E L  A      W  +PG  P    +       G      +
Sbjct: 803 RQAQAAGVSLSLYMEESVQELLRDAAERFKGWTNVPG--PQHTELACRKAPDGHPLRMWK 860

Query: 223 ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
           A   V   P  V   +L++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 861 ASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPH 913

Query: 281 -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
             RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 914 PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRALMLTSQYLMEPCGLG 968

Query: 339 GSIIHIVDHMDL 350
            S +  +   DL
Sbjct: 969 RSRLTHICRADL 980


>gi|187609447|sp|A2Z0Q0.1|HOX25_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX25; AltName:
           Full=HD-ZIP protein HOX25; AltName: Full=Homeodomain
           transcription factor HOX25; AltName: Full=OsHox25
 gi|125563531|gb|EAZ08911.1| hypothetical protein OsI_31176 [Oryza sativa Indica Group]
          Length = 260

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 8/92 (8%)

Query: 29  RYTPEQVEALERLYHECP-KPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK- 86
           R T EQV ALER + E   K    R+ +L R       I P+Q+ VWFQNRR R K ++ 
Sbjct: 25  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWKTKQL 80

Query: 87  --EASRLQAVNRKLTAMNKLLMEENDRLQKQV 116
             +  RL+A + +L A    L  +N+ L+ QV
Sbjct: 81  ELDFDRLRAAHDELLAGRAALAADNESLRSQV 112


>gi|328707561|ref|XP_003243430.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
           [Acyrthosiphon pisum]
          Length = 487

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 38/60 (63%), Gaps = 4/60 (6%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 92
           +Q+  L   Y   P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+R  A + Q
Sbjct: 307 KQLHTLRTCYSANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKRAIALKQQ 362


>gi|357483321|ref|XP_003611947.1| Homeodomain leucine zipper protein [Medicago truncatula]
 gi|355513282|gb|AES94905.1| Homeodomain leucine zipper protein [Medicago truncatula]
          Length = 143

 Score = 49.3 bits (116), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 8/101 (7%)

Query: 10  RDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPK 69
           R  ++ GG+    D  K  + + EQV  LE  +    K  S ++ +L  E      ++P+
Sbjct: 37  RSKKNKGGENSANDMNKKRKLSDEQVNILEENFGNEHKLESEKKDRLAMEL----GLDPR 92

Query: 70  QIKVWFQNRRCREKQRK---EASRLQAVNRKLTAMNKLLME 107
           Q+ VWFQNRR R K +K   E   L+ ++   T + K L+E
Sbjct: 93  QVAVWFQNRRARWKNKKLEEEYFSLKKIHES-TILEKCLLE 132


>gi|402467857|gb|EJW03091.1| hypothetical protein EDEG_02526 [Edhazardia aedis USNM 41457]
          Length = 517

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 4/60 (6%)

Query: 28  VRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 87
           ++ + EQ+E LE  + E PKP+S  +++L +    L NI  K I++WFQNRR +++  KE
Sbjct: 153 IKISAEQLEILEEKFKENPKPTSSVKKELGK----LLNIPAKNIQIWFQNRRAKQRTEKE 208


>gi|322692435|gb|EFY84346.1| homeobox transcription factor, putative [Metarhizium acridum CQMa
           102]
          Length = 295

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 3/59 (5%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 84
           K  R TP+Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K+
Sbjct: 175 KRFRLTPQQTRFLMGEFAKQPHPDATLRERLSREIPGLS---PRQVQVWFQNRRAKMKR 230


>gi|558491|gb|AAB31260.1| LIM-type homeodomain [Mus sp.]
          Length = 230

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)

Query: 31 TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 89
          T +Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 5  TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 60

Query: 90 R 90
          R
Sbjct: 61 R 61


>gi|356523040|ref|XP_003530150.1| PREDICTED: homeobox-leucine zipper protein HAT3-like [Glycine max]
          Length = 308

 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 8/104 (7%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           GG      + K +R + EQ   LE  + E    +  ++Q L ++     N+ P+Q++VWF
Sbjct: 136 GGDADADASRKKLRLSKEQALVLEETFKEHNTLNPKQKQALAKQL----NLMPRQVEVWF 191

Query: 76  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           QNRR R K ++     + + R        L EEN RLQK+V +L
Sbjct: 192 QNRRARTKLKQTEVDCEYLKRCCEN----LTEENRRLQKEVQEL 231


>gi|449296679|gb|EMC92698.1| hypothetical protein BAUCODRAFT_27052 [Baudoinia compniacensis UAMH
           10762]
          Length = 593

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 15/109 (13%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T  Q   L   +   P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 190 KRFRLTHNQTRFLMSEFARQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKLK-- 244

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAA 134
               RL   +R+    ++ L    D  Q         + F  QQ+ NAA
Sbjct: 245 ----RLNTDDRERMLRSRALPVNFDMTQ------ALHSPFTSQQSPNAA 283


>gi|83833844|gb|AAZ23784.2| type II homeodomain-leucine zipper protein [Medicago sativa]
          Length = 340

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R + +Q   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 201 KKLRLSKDQSAFLEESFKEHHTLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 256

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCES 145
           +     + + R      + L EEN RL K++ +L    T      Q  AT  T   SCE 
Sbjct: 257 QTEVDCEYLKRCC----ETLTEENRRLHKELQELRALKTSNPFNMQLPATTLTMCPSCER 312

Query: 146 VVTS 149
           V T+
Sbjct: 313 VATN 316


>gi|79540980|ref|NP_200742.2| WUSCHEL-related homeobox 2 [Arabidopsis thaliana]
 gi|61217291|sp|Q6X7K1.1|WOX2_ARATH RecName: Full=WUSCHEL-related homeobox 2
 gi|37909289|gb|AAP37132.1| WOX2 protein [Arabidopsis thaliana]
 gi|225879134|dbj|BAH30637.1| hypothetical protein [Arabidopsis thaliana]
 gi|332009790|gb|AED97173.1| WUSCHEL-related homeobox 2 [Arabidopsis thaliana]
          Length = 260

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 31  TPEQVEALERLYHECPK-PSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAS 89
           T +Q+  LE LY E  + PS+ + QQ+        +IE K +  WFQN + R++Q+++  
Sbjct: 18  TKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQKQKQE 77

Query: 90  RLQAVNRKLTAMNKLL 105
           R+   NR L   ++  
Sbjct: 78  RMAYFNRLLHKTSRFF 93


>gi|356496783|ref|XP_003517245.1| PREDICTED: homeobox-leucine zipper protein ATHB-40-like [Glycine
           max]
          Length = 214

 Score = 49.3 bits (116), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 9/107 (8%)

Query: 16  GGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWF 75
           GG+    +  K  + + +QV  LE+ +    K  S R+ +L  E      ++P+Q+ VWF
Sbjct: 46  GGENAASEANKKRKLSDDQVNLLEQNFGNEHKLESERKDRLAMEL----GLDPRQVAVWF 101

Query: 76  QNRRCREKQRK---EASRLQAVNRKLTAMNKLLME-ENDRLQKQVSQ 118
           QNRR R K +K   E S L+  N + T + K  +E E  +L++Q+S+
Sbjct: 102 QNRRARWKNKKLEEEYSNLKK-NHEATLLEKCRLETEVLKLKEQLSE 147


>gi|255579497|ref|XP_002530591.1| homeobox protein, putative [Ricinus communis]
 gi|223529839|gb|EEF31771.1| homeobox protein, putative [Ricinus communis]
          Length = 289

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 8/94 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K +R T EQ   LE  + +    +  ++Q L R+     N+ P+Q++VWFQNRR R K +
Sbjct: 144 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQL----NLRPRQVEVWFQNRRARTKLK 199

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
           +     +     L    + L +EN RLQK++ +L
Sbjct: 200 QTEVDCEF----LKKCCETLTDENRRLQKELQEL 229


>gi|410903462|ref|XP_003965212.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Takifugu
           rubripes]
          Length = 406

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 22/162 (13%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 90
           T +Q+E L+  Y+  PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ K+ + 
Sbjct: 169 TAKQLETLKNAYNNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 224

Query: 91  LQAVNRKLTAMNKLL---MEENDRLQKQ---------------VSQLVYENTFFRQQTQN 132
            Q   +    M +       + D +Q++               +S L   N  +   +++
Sbjct: 225 RQRWGQYFRNMKRSRGSSKSDKDSIQEEGMDSDAEVSFTDEMPMSDLGLTNGVYSSLSES 284

Query: 133 AATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLS 174
           +  +            S +H + P Q   H  R  SP G  S
Sbjct: 285 SPAMGGRQVGNNHGSFSLEHSVVPSQDQFHDMRSNSPYGAQS 326


>gi|164607169|ref|NP_001101319.2| stAR-related lipid transfer protein 8 [Rattus norvegicus]
          Length = 1014

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 83/192 (43%), Gaps = 20/192 (10%)

Query: 165 RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
           R A  AG+ LS+  EE++ E L  A      W  +PG  P    +       G      +
Sbjct: 798 RQAQAAGVSLSLYMEESVQELLRDAAERFKGWTNVPG--PQHTELACRKAPDGHPLRMWK 855

Query: 223 ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
           A   V   P  V   +L++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 856 ASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPH 908

Query: 281 -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
             RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 909 PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRALMLTSQYLMEPCGLG 963

Query: 339 GSIIHIVDHMDL 350
            S +  +   DL
Sbjct: 964 RSRLTHICRADL 975


>gi|449487811|ref|XP_004157812.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           HAT5-like [Cucumis sativus]
          Length = 334

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 11/142 (7%)

Query: 11  DSRDSGGQKM---IMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIE 67
           DS D+G + +        K  R T +QV  LE+ +    K    R+ QL ++      ++
Sbjct: 81  DSEDNGDEDLDDYFHHPXKKRRLTVDQVRFLEKSFETENKLEPERKVQLAKDL----GLQ 136

Query: 68  PKQIKVWFQNRRCREKQR---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT 124
           P+Q+ +WFQNRR R K +   K+   LQ+    L    + L++E D L+ ++  L+ +  
Sbjct: 137 PRQVAIWFQNRRARWKTKQLEKDYEALQSSYGSLKVDYENLLKEKDSLKAEI-LLLTDKL 195

Query: 125 FFRQQTQNAATLATTDTSCESV 146
             +++ +  + L+  D   E +
Sbjct: 196 LHKEKERGNSVLSEVDKFGEEL 217


>gi|242036675|ref|XP_002465732.1| hypothetical protein SORBIDRAFT_01g044620 [Sorghum bicolor]
 gi|241919586|gb|EER92730.1| hypothetical protein SORBIDRAFT_01g044620 [Sorghum bicolor]
          Length = 324

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R   EQV ALER +    K    R+ ++ R+  +    +P+Q+ VWFQNRR R K +
Sbjct: 70  KKRRLLQEQVRALERCFETDNKLDPDRKARIARDLAL----QPRQVAVWFQNRRARWKTK 125

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
              ++ S L+A +  L A    L  + D L  ++ +L
Sbjct: 126 TLERDFSALRARHDALRADCDALRRDKDALAAEIREL 162


>gi|109510355|ref|XP_001077477.1| PREDICTED: rhox homeobox family member 1-like [Rattus norvegicus]
 gi|293351182|ref|XP_002727720.1| PREDICTED: rhox homeobox family member 1-like [Rattus norvegicus]
          Length = 199

 Score = 49.3 bits (116), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 41/63 (65%), Gaps = 4/63 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           + +++TPEQ+  L+R++ E   P +++R++L +    L N+E   +K+WF  RR + ++ 
Sbjct: 92  RKLKFTPEQLLELDRVFEETQYPDALQRKELAK----LINVEEYTVKIWFNKRRAKIRKH 147

Query: 86  KEA 88
           ++A
Sbjct: 148 QKA 150


>gi|302771079|ref|XP_002968958.1| hypothetical protein SELMODRAFT_18217 [Selaginella moellendorffii]
 gi|302816653|ref|XP_002990005.1| hypothetical protein SELMODRAFT_18216 [Selaginella moellendorffii]
 gi|300142316|gb|EFJ09018.1| hypothetical protein SELMODRAFT_18216 [Selaginella moellendorffii]
 gi|300163463|gb|EFJ30074.1| hypothetical protein SELMODRAFT_18217 [Selaginella moellendorffii]
          Length = 87

 Score = 49.3 bits (116), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R + EQV +LE  +    +   +R+ QL +E      ++P+Q+ VWFQNRR R K +
Sbjct: 6   KKRRLSVEQVRSLELSFETENRLEPVRKMQLAQEL----GLQPRQVAVWFQNRRARWKTK 61

Query: 86  KEASRLQAVNRKLTAMNKLLMEENDRLQKQ 115
           +    L+     L A  + L EEN RL+ Q
Sbjct: 62  Q----LEKDYDVLKAAYESLAEENKRLKAQ 87


>gi|224133286|ref|XP_002321530.1| predicted protein [Populus trichocarpa]
 gi|222868526|gb|EEF05657.1| predicted protein [Populus trichocarpa]
          Length = 268

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 8/118 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +QV+ LE+ +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 40  KKRRLTVDQVQFLEKSFELENKLEPERKIQLAKDL----GLQPRQVAIWFQNRRARWKTK 95

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTD 140
              K+   LQ+    L A    L++E ++L+ +V+ L+ +    +++ +  + L+  D
Sbjct: 96  QLEKDYDVLQSSYNSLKADYDNLLKEKEKLKAEVN-LLTDKLLLKEKEKGISELSDKD 152


>gi|21668482|dbj|BAC01272.1| LIM homeobox protein 4 [Homo sapiens]
          Length = 240

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)

Query: 31 TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 89
          T +Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 15 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 70

Query: 90 R 90
          R
Sbjct: 71 R 71


>gi|296087684|emb|CBI34940.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 7/98 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R TPEQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 49  KKRRLTPEQVHLLEKSFEAENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 104

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++   L++    L +    +++E ++L+ +V  L 
Sbjct: 105 QLERDYDLLKSSYDSLVSEYDSILKEKEKLKSEVVSLT 142


>gi|212720748|ref|NP_001132844.1| uncharacterized protein LOC100194336 [Zea mays]
 gi|194695554|gb|ACF81861.1| unknown [Zea mays]
 gi|219885465|gb|ACL53107.1| unknown [Zea mays]
 gi|408690270|gb|AFU81595.1| HB-type transcription factor, partial [Zea mays subsp. mays]
 gi|414589737|tpg|DAA40308.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 273

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R + EQV ALER +    K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 51  KKRRLSAEQVRALERSFEVENKLEPERKARLARDL----GLQPRQVAVWFQNRRARWKTK 106

Query: 86  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 119
           +      A+ R   A+   +  L  + D L  ++ +L
Sbjct: 107 QLERDYAALRRSYDALRLDHDALRRDKDALLAEIREL 143


>gi|414589432|tpg|DAA40003.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein, partial [Zea mays]
          Length = 282

 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQ---QLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           R T EQV  LE  + E  +    +R+   +   E      I P+Q+ VWFQNRR R + +
Sbjct: 92  RLTAEQVRELELSFEEEKRKLEPKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWRSK 151

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 120
              ++  RL+A +  L A    L+ +NDRL+ QV  L 
Sbjct: 152 QLEQDFDRLRAAHDDLIAGRDALLADNDRLRSQVITLT 189


>gi|21706802|gb|AAH34186.1| Stard8 protein [Mus musculus]
          Length = 851

 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 83/192 (43%), Gaps = 20/192 (10%)

Query: 165 RDASPAGL-LSI-AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAAR 222
           R A  AG+ LS+  EE++ E L  A      W  +PG  P    +       G      +
Sbjct: 635 RQAQAAGVSLSLYMEESVQELLRDAAERFKGWTNVPG--PQHTELACRKAPDGHPLRMWK 692

Query: 223 ACGLVGLDPTRVAE-ILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAP- 280
           A   V   P  V   +L++R  W  D    +V+  L  G    +EL +   Y   ++AP 
Sbjct: 693 ASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPG----VELYH---YVTDSMAPH 745

Query: 281 -ARDFWLLR-YTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGG 338
             RDF +LR + S L  G  ++  +SL+     P  P     VRA ML S YL+ PC  G
Sbjct: 746 PCRDFVVLRMWRSDLPRGGCLLVSQSLD-----PEQPVPESGVRALMLTSQYLMEPCGLG 800

Query: 339 GSIIHIVDHMDL 350
            S +  +   DL
Sbjct: 801 RSRLTHICRADL 812


>gi|20339337|gb|AAM19349.1| LIM homeobox protein [Homo sapiens]
          Length = 239

 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)

Query: 31 TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 89
          T +Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 14 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 69

Query: 90 R 90
          R
Sbjct: 70 R 70


>gi|414869821|tpg|DAA48378.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 293

 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 22/130 (16%)

Query: 26  KYVRYTPEQVEALERLYHE----CPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81
           K +R + EQ   LE  + E     PK  +   +QL        N+ P+Q++VWFQNRR R
Sbjct: 110 KKLRLSKEQSAFLEESFKEHSTLNPKQKAALAKQL--------NLRPRQVEVWFQNRRAR 161

Query: 82  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT---FFRQQTQNAATLAT 138
            K ++     + + R      + L EEN RL K++++L    T   FF    +  AT  +
Sbjct: 162 TKLKQTEVDCEYLKR----CCETLTEENRRLHKELAELRALKTAPPFF---MRLPATTLS 214

Query: 139 TDTSCESVVT 148
              SCE V +
Sbjct: 215 MCPSCERVAS 224


>gi|449469470|ref|XP_004152443.1| PREDICTED: homeobox-leucine zipper protein HAT5-like isoform 1
           [Cucumis sativus]
          Length = 339

 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 11/142 (7%)

Query: 11  DSRDSGGQKM---IMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIE 67
           DS D+G + +        K  R T +QV  LE+ +    K    R+ QL ++      ++
Sbjct: 86  DSEDNGDEDLDDYFHHPEKKRRLTVDQVRFLEKSFETENKLEPERKVQLAKDL----GLQ 141

Query: 68  PKQIKVWFQNRRCREKQR---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT 124
           P+Q+ +WFQNRR R K +   K+   LQ+    L    + L++E D L+ ++  L+ +  
Sbjct: 142 PRQVAIWFQNRRARWKTKQLEKDYEALQSSYGSLKVDYENLLKEKDSLKAEI-LLLTDKL 200

Query: 125 FFRQQTQNAATLATTDTSCESV 146
             +++ +  + L+  D   E +
Sbjct: 201 LHKEKERGNSVLSEVDKFGEEL 222


>gi|342672243|gb|AEL30894.1| STENOFOLIA-like 1 protein [Medicago sativa]
          Length = 353

 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)

Query: 31  TPEQVEALERLYHECPK-PSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 86
           TPEQ+ ALE LY    + PS+++ QQ+  +      IE K +  WFQN + RE+Q++
Sbjct: 96  TPEQLRALEELYRRGTRTPSAVQIQQITAQLRKFGKIEGKNVFYWFQNHKARERQKR 152


>gi|4433048|dbj|BAA21017.1| DNA-binding protein [Daucus carota]
          Length = 151

 Score = 48.9 bits (115), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 7/97 (7%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R +  QV+ALE+ +    K    R+ +L +E      ++P+Q+ VWFQNRR R K +
Sbjct: 57  KKRRLSINQVKALEKNFEVENKLEPERKVKLAQEL----GLQPRQVAVWFQNRRARWKTK 112

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 119
              ++   L+A    L   N  L +EN  L K++ +L
Sbjct: 113 QLERDYGVLKANYDSLKLKNDTLQQENQSLLKEIREL 149


>gi|359496307|ref|XP_003635205.1| PREDICTED: homeobox-leucine zipper protein HAT4-like isoform 2
           [Vitis vinifera]
          Length = 289

 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 28/161 (17%)

Query: 5   SSGGSRDSRDSGGQKMIMDNG---------------KYVRYTPEQVEALERLYHECPKPS 49
           S  G R  R++ G +  M+                 K +R + +Q   LE  + E    +
Sbjct: 95  SVSGKRSEREANGDEHEMERACSRGISDEEDGDTSRKKLRLSKDQSAILEENFKEHNTLN 154

Query: 50  SMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEEN 109
             ++  L ++     N+ P+Q++VWFQNRR R K ++     + + R        L EEN
Sbjct: 155 PKQKLALAKQL----NLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCEN----LTEEN 206

Query: 110 DRLQKQVSQ---LVYENTFFRQQTQNAATLATTDTSCESVV 147
            RLQK+V++   L     F+ Q T    T  T   SCE V 
Sbjct: 207 RRLQKEVNELRALKLSPQFYMQMT--PPTTLTMCPSCERVA 245


>gi|356572472|ref|XP_003554392.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Glycine max]
          Length = 292

 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 11/117 (9%)

Query: 6   SGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSN 65
           S G  +  D G Q +     K  R + EQV+ALE+ +    K    R+ QL +       
Sbjct: 71  SHGDDELSDEGSQLL---GEKKKRLSLEQVKALEKSFELGNKLEPERKMQLAKAL----G 123

Query: 66  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 122
           ++P+QI +WFQNRR R K ++     + + ++  A+      +ND L+ Q  +L  E
Sbjct: 124 LQPRQIAIWFQNRRARWKTKQLEKEYEVLKKQFEAVKA----DNDSLKSQNQKLHTE 176


>gi|395530909|ref|XP_003767529.1| PREDICTED: uncharacterized protein LOC100914829 [Sarcophilus
           harrisii]
          Length = 659

 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 89
           T +Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 434 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 489

Query: 90  R 90
           R
Sbjct: 490 R 490


>gi|350606310|ref|NP_001234250.1| homeobox [Solanum lycopersicum]
 gi|1161575|emb|CAA64417.1| homeobox [Solanum lycopersicum]
          Length = 323

 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 22/130 (16%)

Query: 6   SGGSRDSRDSGGQKMIMDN-----GKYV-------RYTPEQVEALERLYHECPKPSSMRR 53
           +GG R   DS  Q    DN     G+Y+       R T  QV+ LE+ + E  K    R+
Sbjct: 61  NGGKRSFFDSFDQD---DNEADELGEYLHQAEKKRRLTDNQVQFLEKSFGEENKLEPERK 117

Query: 54  QQLIRECPILSNIEPKQIKVWFQNRRCREKQR---KEASRLQAVNRKLTAMNKLLMEEND 110
            QL +E      ++P+QI +WFQNRR R K +   K+   L+     L +    L++E +
Sbjct: 118 VQLAKEL----GLQPRQIAIWFQNRRARWKTKQLEKDYDELRNRYDTLKSNYNNLLKEKE 173

Query: 111 RLQKQVSQLV 120
            L+ +V +L 
Sbjct: 174 DLRTEVFRLT 183


>gi|224133390|ref|XP_002328030.1| predicted protein [Populus trichocarpa]
 gi|222837439|gb|EEE75818.1| predicted protein [Populus trichocarpa]
          Length = 179

 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 13/126 (10%)

Query: 29  RYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 88
           R   +Q+  LE  ++   K  +  + +L R+      + PKQ+ +W+QNRR R K   +A
Sbjct: 23  RLARDQLNLLETSFNANQKLKAEHKTELARQL----GVPPKQVAIWYQNRRARHK--NDA 76

Query: 89  SRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQ-----TQNAATLATTDTSC 143
                +N +L   N  ++ EN RL+KQVS L +E    +Q      T +AATL +   S 
Sbjct: 77  IEHDYMNIQLELGN--VLAENIRLEKQVSMLKFELNKVQQMILFGPTSSAATLPSVSGSS 134

Query: 144 ESVVTS 149
           +    S
Sbjct: 135 DEQANS 140


>gi|157830485|pdb|1BW5|A Chain A, The Nmr Solution Structure Of The Homeodomain Of The Rat
          Insulin Gene Enhancer Protein Isl-1, 50 Structures
          Length = 66

 Score = 48.9 bits (115), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 35/53 (66%), Gaps = 4/53 (7%)

Query: 33 EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
          +Q+  L   Y   P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 13 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 61


>gi|449469472|ref|XP_004152444.1| PREDICTED: homeobox-leucine zipper protein HAT5-like isoform 2
           [Cucumis sativus]
          Length = 334

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 11/142 (7%)

Query: 11  DSRDSGGQKM---IMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIE 67
           DS D+G + +        K  R T +QV  LE+ +    K    R+ QL ++      ++
Sbjct: 81  DSEDNGDEDLDDYFHHPEKKRRLTVDQVRFLEKSFETENKLEPERKVQLAKDL----GLQ 136

Query: 68  PKQIKVWFQNRRCREKQR---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENT 124
           P+Q+ +WFQNRR R K +   K+   LQ+    L    + L++E D L+ ++  L+ +  
Sbjct: 137 PRQVAIWFQNRRARWKTKQLEKDYEALQSSYGSLKVDYENLLKEKDSLKAEI-LLLTDKL 195

Query: 125 FFRQQTQNAATLATTDTSCESV 146
             +++ +  + L+  D   E +
Sbjct: 196 LHKEKERGNSVLSEVDKFGEEL 217


>gi|324120795|dbj|BAJ78787.1| Islet homologue protein [Lethenteron camtschaticum]
          Length = 284

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 36/53 (67%), Gaps = 4/53 (7%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Q++ L   Y   P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 124 KQLQTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 172


>gi|410903460|ref|XP_003965211.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Takifugu
           rubripes]
          Length = 399

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 22/162 (13%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 90
           T +Q+E L+  Y+  PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ K+ + 
Sbjct: 162 TAKQLETLKNAYNNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 217

Query: 91  LQAVNRKLTAMNKLL---MEENDRLQKQ---------------VSQLVYENTFFRQQTQN 132
            Q   +    M +       + D +Q++               +S L   N  +   +++
Sbjct: 218 RQRWGQYFRNMKRSRGSSKSDKDSIQEEGMDSDAEVSFTDEMPMSDLGLTNGVYSSLSES 277

Query: 133 AATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLS 174
           +  +            S +H + P Q   H  R  SP G  S
Sbjct: 278 SPAMGGRQVGNNHGSFSLEHSVVPSQDQFHDMRSNSPYGAQS 319


>gi|75129564|sp|Q6V9S9.1|HOX8_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX8; AltName:
           Full=HD-ZIP protein HOX8; AltName: Full=Homeodomain
           transcription factor HOX8; AltName: Full=OsHox8
 gi|33943626|gb|AAQ55492.1| homeodomain leucine-zipper protein Hox8 [Oryza sativa Indica Group]
 gi|78708411|gb|ABB47386.1| Homeobox domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|215769297|dbj|BAH01526.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 281

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 18/106 (16%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 83
           K  R   EQV ALER +    K    R+ ++ R+      + P+Q+ VWFQNRR R K  
Sbjct: 41  KKRRLAAEQVRALERSFEADNKLDPERKARIARDL----RLHPRQVAVWFQNRRARWKTK 96

Query: 84  ----------QRKEASRLQ--AVNRKLTAMNKLLMEENDRLQKQVS 117
                      R +A RL+  A+ R   A+   + +  DR+  Q+S
Sbjct: 97  QIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDRVDGQMS 142


>gi|218189190|gb|EEC71617.1| hypothetical protein OsI_04034 [Oryza sativa Indica Group]
          Length = 400

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 12/128 (9%)

Query: 275 PTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRP 334
           P+ L PAR    LRY +VL +G +VV + SL++            F +   +PSG+LI+ 
Sbjct: 4   PSPLVPARKCTFLRYCNVLNEGLVVVIDVSLDD---------GSIFSKCRKMPSGFLIQS 54

Query: 335 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRH---LRQISQEVSQP 391
                  +  ++H+ ++   V E+ +P        A++      R    +R +    + P
Sbjct: 55  IRPNSCKVTAIEHVLVDDTGVHELYQPCMNGLVFGARRWVATMARQSARMRDVHHNKTAP 114

Query: 392 SVTGWGRR 399
            V+  GR+
Sbjct: 115 QVSTKGRK 122


>gi|357141086|ref|XP_003572077.1| PREDICTED: homeobox-leucine zipper protein HOX1-like [Brachypodium
           distachyon]
          Length = 272

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 9   SRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           S D  DSG       + K +R + +Q   LE  +++    +  ++  L R+      + P
Sbjct: 110 SDDDEDSG--SGAGGSRKKLRLSKDQSAVLEDSFNQHSTLNPKQKAALARQL----GLRP 163

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV----YENT 124
           +Q++VWFQNRR R K ++     +A+ R+  A    L EEN RL ++V  L     +   
Sbjct: 164 RQVEVWFQNRRARTKLKQTEVDCEALRRRCDA----LTEENRRLLREVQALKLPLPHPQL 219

Query: 125 FFRQQTQNAATLATTDTSCESVVTSGQ 151
           + R      A   T   SCE V  SG+
Sbjct: 220 YMR------APPLTMCPSCERVAPSGK 240


>gi|18858909|ref|NP_571039.1| insulin gene enhancer protein isl-2b [Danio rerio]
 gi|1708564|sp|P53407.1|ISL2B_DANRE RecName: Full=Insulin gene enhancer protein isl-2b; Short=Islet-2B;
           AltName: Full=Insulin gene enhancer protein isl-3;
           Short=Islet-3
 gi|1037168|dbj|BAA07485.1| zfIsl-3 [Danio rerio]
 gi|55962547|emb|CAI11499.1| islet 3 [Danio rerio]
 gi|63100507|gb|AAH95011.1| Islet2b [Danio rerio]
          Length = 358

 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 36/53 (67%), Gaps = 4/53 (7%)

Query: 33  EQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 201 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 249


>gi|224099733|ref|XP_002311597.1| predicted protein [Populus trichocarpa]
 gi|222851417|gb|EEE88964.1| predicted protein [Populus trichocarpa]
          Length = 289

 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 17/138 (12%)

Query: 14  DSGGQKMIMDNG-----KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEP 68
           +  G+  + D+G     K  R + EQV+ LE+ +    K    R+ QL R       ++P
Sbjct: 66  EGNGEDELSDDGSQAGEKKRRLSMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQP 121

Query: 69  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQLVYENTF 125
           +QI +WFQNRR R K ++       + R+  A+   N  L  +N RL  ++  L      
Sbjct: 122 RQIAIWFQNRRARWKTKQLEIDYDLLKRQFDAVKAENNALQTQNQRLHAEILALKS---- 177

Query: 126 FRQQTQNAATLATTDTSC 143
            R+ T++      T+ SC
Sbjct: 178 -REPTESINLNKETEGSC 194


>gi|449446648|ref|XP_004141083.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Cucumis
           sativus]
          Length = 285

 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 8/125 (6%)

Query: 26  KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 85
           K  R T +QV+ LE+ + E  K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 69  KKRRLTHDQVQMLEKNFEEENKLEPERKSQLAKKL----GLQPRQVAVWFQNRRARWKTK 124

Query: 86  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTS 142
              ++   L+A    L +    +++EN  L+ +V+ L  E    ++     AT+ +  ++
Sbjct: 125 QLERDYDVLKASYDLLVSNYDSIVKENAVLKSEVASLT-EKCLAKELGGGEATIPSITST 183

Query: 143 CESVV 147
            E ++
Sbjct: 184 SELLL 188


>gi|20502369|dbj|BAB91364.1| LIM homeodomain protein [Branchiostoma belcheri]
          Length = 402

 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 5/61 (8%)

Query: 31  TPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 89
           T +Q+E L++ Y   PKP+   R+QL +E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 177 TAKQLETLKQAYQNSPKPARHVREQLSQE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 232

Query: 90  R 90
           R
Sbjct: 233 R 233


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.132    0.393 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,592,624,755
Number of Sequences: 23463169
Number of extensions: 494329739
Number of successful extensions: 1353217
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 4361
Number of HSP's that attempted gapping in prelim test: 1347072
Number of HSP's gapped (non-prelim): 6168
length of query: 731
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 581
effective length of database: 8,839,720,017
effective search space: 5135877329877
effective search space used: 5135877329877
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)