Query 004779
Match_columns 731
No_of_seqs 306 out of 1947
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 12:46:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004779.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004779hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02638 cellulose synthase A 100.0 5E-176 1E-180 1524.3 56.0 711 3-730 253-1061(1079)
2 PLN02400 cellulose synthase 100.0 4E-176 9E-181 1525.4 53.7 713 1-730 257-1066(1085)
3 PLN02436 cellulose synthase A 100.0 9E-176 2E-180 1515.8 55.9 711 2-730 267-1076(1094)
4 PLN02189 cellulose synthase 100.0 3E-175 6E-180 1514.3 56.4 710 3-730 235-1022(1040)
5 PLN02195 cellulose synthase A 100.0 4E-175 8E-180 1506.3 55.4 709 4-730 157-957 (977)
6 PLN02915 cellulose synthase A 100.0 2E-173 5E-178 1498.5 54.3 711 4-730 192-1026(1044)
7 PLN02893 Cellulose synthase-li 100.0 2E-172 5E-177 1465.8 58.6 700 2-730 9-733 (734)
8 PLN02248 cellulose synthase-li 100.0 5E-173 1E-177 1497.1 52.3 715 4-730 267-1120(1135)
9 PLN02190 cellulose synthase-li 100.0 7E-173 1E-177 1461.8 52.1 699 1-726 5-755 (756)
10 PF03552 Cellulose_synt: Cellu 100.0 2E-161 4E-166 1365.2 37.8 622 97-730 1-708 (720)
11 PRK11498 bcsA cellulose syntha 100.0 2.6E-74 5.6E-79 678.5 51.8 489 20-708 186-686 (852)
12 TIGR03030 CelA cellulose synth 100.0 5.6E-74 1.2E-78 677.9 54.7 508 20-709 56-574 (713)
13 PRK05454 glucosyltransferase M 100.0 1.8E-39 4E-44 378.8 51.7 361 19-541 40-421 (691)
14 PRK14583 hmsR N-glycosyltransf 100.0 4.2E-36 9.1E-41 338.6 40.1 230 91-496 71-306 (444)
15 cd04191 Glucan_BSP_ModH Glucan 100.0 1.8E-37 3.8E-42 325.0 23.8 241 97-492 1-253 (254)
16 COG1215 Glycosyltransferases, 100.0 8E-36 1.7E-40 333.6 31.2 233 94-496 53-290 (439)
17 PRK11204 N-glycosyltransferase 100.0 1.1E-33 2.4E-38 316.2 40.4 230 91-496 50-285 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 9E-34 1.9E-38 319.3 35.0 282 91-548 45-341 (439)
19 PRK14716 bacteriophage N4 adso 100.0 7.5E-31 1.6E-35 297.3 39.2 262 91-519 62-353 (504)
20 cd06437 CESA_CaSu_A2 Cellulose 100.0 1.3E-30 2.8E-35 267.4 21.9 227 95-490 1-232 (232)
21 cd06421 CESA_CelA_like CESA_Ce 100.0 2.7E-30 5.9E-35 263.3 22.7 230 95-494 1-234 (234)
22 PRK11234 nfrB bacteriophage N4 100.0 4E-28 8.7E-33 285.2 36.5 239 88-495 57-334 (727)
23 cd06427 CESA_like_2 CESA_like_ 100.0 2.2E-29 4.7E-34 260.4 19.9 231 95-496 1-236 (241)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 2.6E-28 5.7E-33 250.2 21.9 230 98-496 1-234 (236)
25 PF13641 Glyco_tranf_2_3: Glyc 100.0 4.7E-29 1E-33 254.1 6.8 224 95-489 1-228 (228)
26 TIGR03472 HpnI hopanoid biosyn 100.0 2.6E-26 5.6E-31 253.6 28.7 228 92-491 38-273 (373)
27 cd04190 Chitin_synth_C C-termi 99.9 6E-27 1.3E-31 243.6 15.2 172 270-492 64-243 (244)
28 cd02520 Glucosylceramide_synth 99.9 1.9E-25 4E-30 223.9 17.2 191 95-489 1-195 (196)
29 PRK15489 nfrB bacteriophage N4 99.9 2.3E-23 5E-28 242.5 35.5 236 91-494 67-341 (703)
30 cd04192 GT_2_like_e Subfamily 99.9 2.3E-24 5E-29 218.3 21.2 221 99-489 1-229 (229)
31 cd06439 CESA_like_1 CESA_like_ 99.9 3.2E-24 6.9E-29 222.0 19.6 227 89-493 23-251 (251)
32 cd06434 GT2_HAS Hyaluronan syn 99.9 4E-24 8.7E-29 218.6 18.7 229 96-492 1-234 (235)
33 TIGR03469 HonB hopene-associat 99.9 1.5E-21 3.2E-26 216.6 35.0 230 91-488 36-280 (384)
34 COG2943 MdoH Membrane glycosyl 99.9 4.8E-20 1E-24 200.8 44.7 344 19-523 63-423 (736)
35 cd02525 Succinoglycan_BP_ExoA 99.9 1.4E-20 3.1E-25 193.0 18.8 225 96-496 1-233 (249)
36 cd06436 GlcNAc-1-P_transferase 99.8 4.7E-19 1E-23 177.3 16.8 165 99-372 1-176 (191)
37 cd06438 EpsO_like EpsO protein 99.8 1.6E-19 3.5E-24 178.8 12.8 162 99-372 1-168 (183)
38 PF13632 Glyco_trans_2_3: Glyc 99.8 1.5E-17 3.2E-22 165.9 16.7 137 286-490 1-143 (193)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.7 4.1E-17 8.9E-22 162.7 16.5 193 95-463 1-195 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.7 9.8E-17 2.1E-21 160.0 14.5 190 98-463 1-195 (201)
41 cd06433 GT_2_WfgS_like WfgS an 99.7 1.3E-15 2.7E-20 150.4 15.8 186 98-463 1-188 (202)
42 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 1.4E-15 3.1E-20 162.7 15.3 110 98-311 1-110 (299)
43 PLN02726 dolichyl-phosphate be 99.6 1E-14 2.3E-19 151.3 21.0 171 93-372 7-179 (243)
44 cd04196 GT_2_like_d Subfamily 99.6 4.6E-15 1E-19 148.6 16.1 193 98-463 1-197 (214)
45 cd04186 GT_2_like_c Subfamily 99.6 8E-15 1.7E-19 140.3 15.7 157 99-463 1-159 (166)
46 cd02522 GT_2_like_a GT_2_like_ 99.6 1.9E-14 4.2E-19 145.5 17.9 178 97-460 1-178 (221)
47 cd06420 GT2_Chondriotin_Pol_N 99.6 2.4E-14 5.3E-19 140.3 17.7 170 99-462 1-173 (182)
48 cd06913 beta3GnTL1_like Beta 1 99.6 4.3E-14 9.4E-19 143.7 19.8 111 99-311 1-111 (219)
49 cd06442 DPM1_like DPM1_like re 99.6 3.7E-14 8.1E-19 143.7 18.3 194 99-463 1-197 (224)
50 PF13506 Glyco_transf_21: Glyc 99.6 2.6E-14 5.7E-19 141.9 14.0 153 264-488 15-175 (175)
51 PF03142 Chitin_synth_2: Chiti 99.6 2.8E-12 6E-17 145.7 30.2 165 282-495 200-379 (527)
52 PRK10073 putative glycosyl tra 99.5 5.9E-14 1.3E-18 152.8 14.8 116 94-321 5-120 (328)
53 cd04185 GT_2_like_b Subfamily 99.5 1.7E-13 3.7E-18 137.1 17.0 173 99-473 1-175 (202)
54 cd04188 DPG_synthase DPG_synth 99.5 6.2E-13 1.3E-17 134.4 18.2 107 99-312 1-110 (211)
55 cd02526 GT2_RfbF_like RfbF is 99.5 7.4E-14 1.6E-18 142.9 11.3 150 250-471 48-204 (237)
56 cd06423 CESA_like CESA_like is 99.5 6E-14 1.3E-18 133.5 8.9 161 99-372 1-167 (180)
57 PRK10018 putative glycosyl tra 99.5 1.1E-12 2.3E-17 139.8 18.8 109 93-310 3-111 (279)
58 PRK10063 putative glycosyl tra 99.5 1.1E-12 2.3E-17 137.5 17.0 48 95-146 1-49 (248)
59 PF00535 Glycos_transf_2: Glyc 99.4 7.1E-14 1.5E-18 132.9 5.8 164 98-372 1-166 (169)
60 PTZ00260 dolichyl-phosphate be 99.4 6.3E-11 1.4E-15 129.4 25.8 129 92-324 67-201 (333)
61 cd04179 DPM_DPG-synthase_like 99.4 3.1E-12 6.6E-17 125.6 13.6 164 99-373 1-165 (185)
62 TIGR01556 rhamnosyltran L-rham 99.3 3.4E-11 7.4E-16 127.6 14.3 145 249-463 45-195 (281)
63 cd04187 DPM1_like_bac Bacteria 99.3 1E-10 2.3E-15 115.0 14.7 106 250-373 56-161 (181)
64 PRK10714 undecaprenyl phosphat 99.2 2.8E-09 6E-14 116.1 24.3 109 94-310 5-116 (325)
65 cd00761 Glyco_tranf_GTA_type G 99.2 3.6E-10 7.9E-15 104.7 14.2 113 99-324 1-114 (156)
66 PRK13915 putative glucosyl-3-p 99.2 1.3E-10 2.9E-15 125.4 12.2 124 92-323 28-152 (306)
67 PF10111 Glyco_tranf_2_2: Glyc 99.1 1.2E-09 2.6E-14 116.5 17.8 134 265-463 74-216 (281)
68 COG1216 Predicted glycosyltran 99.1 1.6E-09 3.5E-14 116.8 18.3 198 94-463 2-214 (305)
69 KOG2571 Chitin synthase/hyalur 99.1 4.9E-10 1.1E-14 131.7 14.2 166 265-489 424-596 (862)
70 COG0463 WcaA Glycosyltransfera 98.8 3E-08 6.4E-13 94.6 11.9 47 94-146 2-48 (291)
71 cd02511 Beta4Glucosyltransfera 98.8 3.6E-08 7.9E-13 101.6 12.5 44 264-312 56-99 (229)
72 KOG2547 Ceramide glucosyltrans 98.6 6.9E-08 1.5E-12 103.3 7.7 225 92-488 82-314 (431)
73 KOG2978 Dolichol-phosphate man 98.2 2E-05 4.4E-10 77.6 11.6 104 250-372 64-174 (238)
74 KOG2977 Glycosyltransferase [G 98.0 2.7E-05 5.9E-10 81.3 10.6 111 96-310 68-186 (323)
75 cd02514 GT13_GLCNAC-TI GT13_GL 97.9 0.00018 3.9E-09 78.6 13.4 43 97-143 2-44 (334)
76 PF02364 Glucan_synthase: 1,3- 96.7 0.026 5.6E-07 67.6 14.8 196 256-517 263-482 (817)
77 KOG3737 Predicted polypeptide 96.0 0.023 4.9E-07 62.0 8.5 49 91-142 151-199 (603)
78 PF13704 Glyco_tranf_2_4: Glyc 95.3 0.062 1.3E-06 47.6 7.3 35 107-146 1-35 (97)
79 KOG3738 Predicted polypeptide 95.2 0.038 8.3E-07 60.5 6.5 49 92-143 121-169 (559)
80 KOG3736 Polypeptide N-acetylga 94.7 0.026 5.6E-07 65.6 3.7 48 92-142 139-186 (578)
81 PF13712 Glyco_tranf_2_5: Glyc 93.0 0.29 6.4E-06 50.5 7.6 49 265-321 40-89 (217)
82 KOG0916 1,3-beta-glucan syntha 89.9 6 0.00013 50.1 15.0 84 440-529 1173-1258(1679)
83 PF03071 GNT-I: GNT-I family; 88.8 1.4 3.1E-05 49.9 8.3 48 92-144 90-138 (434)
84 cd00899 b4GalT Beta-4-Galactos 86.4 8.4 0.00018 40.0 11.6 53 442-494 138-200 (219)
85 PF03452 Anp1: Anp1; InterPro 85.7 15 0.00032 39.3 13.3 56 92-151 22-79 (269)
86 COG4092 Predicted glycosyltran 85.5 13 0.00029 39.4 12.4 81 248-331 61-142 (346)
87 PRK14503 mannosyl-3-phosphogly 80.1 6 0.00013 43.6 7.8 43 264-309 142-184 (393)
88 TIGR02460 osmo_MPGsynth mannos 78.1 20 0.00043 39.5 10.8 41 264-307 141-181 (381)
89 PF09488 Osmo_MPGsynth: Mannos 77.2 4.1 9E-05 44.8 5.5 40 264-306 141-180 (381)
90 PRK14502 bifunctional mannosyl 67.8 40 0.00087 40.7 11.2 42 264-308 146-187 (694)
91 PF01644 Chitin_synth_1: Chiti 64.8 57 0.0012 32.3 9.9 37 107-143 2-52 (163)
92 PF13896 Glyco_transf_49: Glyc 60.8 11 0.00025 41.1 4.7 45 272-321 120-164 (317)
93 PRK09382 ispDF bifunctional 2- 54.1 32 0.00069 38.7 6.9 40 267-310 83-122 (378)
94 PF05679 CHGN: Chondroitin N-a 50.8 1.5E+02 0.0033 34.6 12.1 49 250-306 315-363 (499)
95 PF02709 Glyco_transf_7C: N-te 47.4 16 0.00034 31.5 2.5 22 442-463 46-67 (78)
96 PF11316 Rhamno_transf: Putati 45.6 3.2E+02 0.007 28.6 12.4 55 248-310 84-140 (234)
97 TIGR03584 PseF pseudaminic aci 42.3 2.3E+02 0.005 29.1 10.7 59 265-323 76-134 (222)
98 COG4097 Predicted ferric reduc 38.0 1.2E+02 0.0026 34.1 7.8 67 93-178 342-408 (438)
99 PF05045 RgpF: Rhamnan synthes 33.3 7.3E+02 0.016 29.0 14.0 74 296-372 380-459 (498)
100 PF02434 Fringe: Fringe-like; 33.1 83 0.0018 33.2 5.7 30 282-313 85-114 (252)
101 cd04182 GT_2_like_f GT_2_like_ 30.1 1.5E+02 0.0032 28.6 6.7 44 264-310 73-117 (186)
102 cd02540 GT2_GlmU_N_bac N-termi 28.5 2.1E+02 0.0045 28.8 7.7 53 251-311 64-117 (229)
103 cd02503 MobA MobA catalyzes th 27.9 2.1E+02 0.0046 27.6 7.4 42 264-309 68-109 (181)
104 TIGR02665 molyb_mobA molybdopt 25.3 1.4E+02 0.003 29.1 5.6 42 264-310 72-114 (186)
105 PRK02726 molybdopterin-guanine 24.8 3.2E+02 0.0069 27.4 8.1 42 265-310 78-119 (200)
106 COG4858 Uncharacterized membra 24.7 6.1E+02 0.013 25.9 9.6 57 651-709 100-160 (226)
107 KOG4179 Lysyl hydrolase/glycos 24.2 2.9E+02 0.0063 31.4 8.0 36 267-307 98-133 (568)
108 PF06638 Strabismus: Strabismu 23.7 1.5E+02 0.0032 34.5 5.8 14 716-729 207-220 (505)
109 KOG3814 Signaling protein van 22.3 2.1E+02 0.0045 32.1 6.4 15 714-728 229-243 (531)
110 PF06306 CgtA: Beta-1,4-N-acet 22.1 2.4E+02 0.0051 31.1 6.7 35 264-302 159-193 (347)
111 PF04724 Glyco_transf_17: Glyc 21.9 1.7E+02 0.0036 32.8 5.8 35 269-305 165-199 (356)
112 TIGR03310 matur_ygfJ molybdenu 21.6 2.4E+02 0.0053 27.3 6.4 43 265-310 74-116 (188)
113 PF09949 DUF2183: Uncharacteri 20.3 2.1E+02 0.0045 26.0 5.0 21 121-142 57-77 (100)
No 1
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=4.7e-176 Score=1524.29 Aligned_cols=711 Identities=33% Similarity=0.645 Sum_probs=660.3
Q ss_pred CCCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhheeccc
Q 004779 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (731)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~l~~aE~~~~~~~~l~~~~~~~p~~r 81 (731)
..+|||++++.++.. .+||+++++++++++++|+||+++.. .++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R 328 (1079)
T PLN02638 253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV----RNAYALWLISVICEIWFALSWILDQFPKWLPVNR 328 (1079)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 377899999988873 67999999999999999999999853 3568999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHh
Q 004779 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (731)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~f 154 (731)
.+++++|.+ ++++|.||||||||||++|||.+++|||+|+||+|||.||+.|||+|||++.+|+++|.||++|
T Consensus 329 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 408 (1079)
T PLN02638 329 ETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEF 408 (1079)
T ss_pred ccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999988853 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 004779 155 AKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------Y 217 (731)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~-------~~~---------~ 217 (731)
||+||||||||+||||+|++||+.+ +..+++.+++|++||++||++|||||+|||.+.+ +|+ +
T Consensus 409 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g 488 (1079)
T PLN02638 409 ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPG 488 (1079)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCC
Confidence 9999999999999999999999998 5567788899999999999999999999998752 222 3
Q ss_pred CCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004779 218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (731)
Q Consensus 218 ~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~ 297 (731)
.+++|||+||||+++++++. |.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+|+||||++|
T Consensus 489 ~~~~dHp~IiqVll~~~~~~----d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiN 564 (1079)
T PLN02638 489 NNTRDHPGMIQVFLGHSGGL----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYIN 564 (1079)
T ss_pred CCCCCCHHHHHHHhcCCCcc----ccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccC
Confidence 57899999999999997753 44677899999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHHHHHHHHHHHHHhhhhcCCccccceeEEEecccccc-ccc
Q 004779 298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFT 376 (731)
Q Consensus 298 ~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~-~~~ 376 (731)
||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+||+| .|+
T Consensus 565 ns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~ 644 (1079)
T PLN02638 565 NSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPP 644 (1079)
T ss_pred chHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 442
Q ss_pred hh---------------------------------------------------------------------hhhhhcCCc
Q 004779 377 HT---------------------------------------------------------------------ELKDTFGKS 387 (731)
Q Consensus 377 ~~---------------------------------------------------------------------~~~~~~~~~ 387 (731)
.. .+.++||+|
T Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S 724 (1079)
T PLN02638 645 IKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQS 724 (1079)
T ss_pred ccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcccc
Confidence 10 133679999
Q ss_pred hhhhhhhhhhhcccCCCCCCchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCe
Q 004779 388 NVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ 467 (731)
Q Consensus 388 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~ 467 (731)
.++++|+..+.+.. +++..++++++||.+|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|++++
T Consensus 725 ~~fi~S~~~~~~~~--~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~A 802 (1079)
T PLN02638 725 AVFVASTLMENGGV--PQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPA 802 (1079)
T ss_pred HHHHHHHHHhhcCC--CCCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchH
Confidence 99999998776532 3345678999999999999999999999999999999999999999999999999999877789
Q ss_pred eEeccCCChHHHhhhhhhhccccccccccccCCcccC-CCCCCHhHHHHhHhHhHhhHHhHHHHHHHHHHHHHHHHcCCc
Q 004779 468 FLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGIS 546 (731)
Q Consensus 468 ~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~l~P~~~l~~g~~ 546 (731)
+.|+||+|+.+++.||+|||+|++||+++|+||+++| .++|++.||++|+++++|| ++++|.++|+++|++||++|++
T Consensus 803 F~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp-~~sip~liY~llP~l~Ll~G~~ 881 (1079)
T PLN02638 803 FKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYP-ITSIPLLLYCTLPAVCLLTGKF 881 (1079)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999999999999999999976 3789999999999999999 9999999999999999999999
Q ss_pred cccccCchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcc
Q 004779 547 LYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLD 626 (731)
Q Consensus 547 ~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~ 626 (731)
++|+++.+++++|+++|+++++++++|++|+|.++++|||+||||+|.++++++++++++++|+||+++++|.||+|..+
T Consensus 882 i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d 961 (1079)
T PLN02638 882 IIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASD 961 (1079)
T ss_pred cCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceecccccc
Confidence 99999999889999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhcC--CcchhHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 004779 627 KEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKDK 704 (731)
Q Consensus 627 ~~~~~~~~~~~f~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~w~l~~l~p~~~al~~r~~k 704 (731)
.+.. .+++|+|+ |+++++|.++++++|++|+++|+++++..+ .|+.+++++++++|++++++||++|||+||
T Consensus 962 ~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~-- 1035 (1079)
T PLN02638 962 EDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ-- 1035 (1079)
T ss_pred cccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--
Confidence 5432 25899999 999999999999999999999999998655 588999999999999999999999999997
Q ss_pred CCCchhHHHHHHHHHHHHHHHhhhhc
Q 004779 705 GRISPSAILLSSVFFMIFLFFGSIIL 730 (731)
Q Consensus 705 ~~~p~~~~~~s~~~~~~~~~~~~~~~ 730 (731)
+|+|++|++||++++++|+++|+-|+
T Consensus 1036 ~r~P~~v~v~s~ll~~~~~l~~v~~~ 1061 (1079)
T PLN02638 1036 NRTPTIVVVWSILLASIFSLLWVRID 1061 (1079)
T ss_pred CCCCeeehHHHHHHHHHHHHHHheec
Confidence 78899999999999999999998775
No 2
>PLN02400 cellulose synthase
Probab=100.00 E-value=4e-176 Score=1525.40 Aligned_cols=713 Identities=34% Similarity=0.641 Sum_probs=660.7
Q ss_pred CCC-CCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhee
Q 004779 1 MDS-PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRP 78 (731)
Q Consensus 1 ~~~-~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~l~~aE~~~~~~~~l~~~~~~~p 78 (731)
||. .+|||++++.++.+ .+||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+|+|+.||+|
T Consensus 257 ~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~----~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~P 332 (1085)
T PLN02400 257 ADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVK----DAYGLWLTSVICEIWFALSWLLDQFPKWYP 332 (1085)
T ss_pred cccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc----ccHHHHHHHHHHHHHHHHHHHHccCccccc
Confidence 345 68899999988873 679999999999999999999998533 368999999999999999999999999999
Q ss_pred ccccCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHH
Q 004779 79 VSRTVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREA 151 (731)
Q Consensus 79 ~~r~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea 151 (731)
++|.+++++|.+ ++++|.||||||||||++|||.+++|||+|+||+|||.||+.|||+|||++.+|+++|.||
T Consensus 333 v~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Ea 412 (1085)
T PLN02400 333 INRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSET 412 (1085)
T ss_pred ccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHH
Confidence 999999998853 2469999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhh-------hcCC-------
Q 004779 152 CRFAKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAV-------EDGE------- 216 (731)
Q Consensus 152 ~~fa~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~-------~~~~------- 216 (731)
++|||+||||||||+||||+|++||+.+ ++.+++.+++|++||++||++|||||+|||.+. ++|+
T Consensus 413 a~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~ 492 (1085)
T PLN02400 413 AEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTP 492 (1085)
T ss_pred HHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCcc
Confidence 9999999999999999999999999998 555577889999999999999999999999875 2332
Q ss_pred --CCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCC
Q 004779 217 --YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM 294 (731)
Q Consensus 217 --~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~ 294 (731)
+.+++|||+||||+++++++. |.++.++|+|+||+||||||++||+||||||+++|+||+|||+|||+|+||||
T Consensus 493 W~g~~~~dHp~iIqVll~~~~~~----d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDm 568 (1085)
T PLN02400 493 WPGNNPRDHPGMIQVFLGHSGGL----DTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDH 568 (1085)
T ss_pred CCCCCCCCCchhhhhhhcCCCCc----ccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEeccccc
Confidence 357899999999999997753 44677899999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHHHHHHHHHHHHHhhhhcCCccccceeEEEecccccc-
Q 004779 295 YCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA- 373 (731)
Q Consensus 295 ~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~- 373 (731)
|+|||+++|++||||+||+.++++||||+||+|+|++++|+|+|++++||++.++|+||+|||+|+||||+|||+||||
T Consensus 569 Y~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~ 648 (1085)
T PLN02400 569 YFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGY 648 (1085)
T ss_pred ccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccch-------------------------------------------------------------------hhhhhhcCC
Q 004779 374 DFTH-------------------------------------------------------------------TELKDTFGK 386 (731)
Q Consensus 374 ~~~~-------------------------------------------------------------------~~~~~~~~~ 386 (731)
.|+. +++.++||+
T Consensus 649 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~ 728 (1085)
T PLN02400 649 DPVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQ 728 (1085)
T ss_pred CCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccc
Confidence 4420 013458999
Q ss_pred chhhhhhhhhhhcccCCCCCCchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCC
Q 004779 387 SNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRP 466 (731)
Q Consensus 387 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~ 466 (731)
|.++++|+..+.+. .+++..+++++++|++|+||.||.+|+||+++||.|+|+|||+.||++||++||||+||+|+++
T Consensus 729 S~~fi~S~~~~~~~--~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~ 806 (1085)
T PLN02400 729 SPVFIAATFMEQGG--IPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRP 806 (1085)
T ss_pred cHHHHHHHHHHhcC--CCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcH
Confidence 99999999855332 2444567899999999999999999999999999999999999999999999999999998789
Q ss_pred eeEeccCCChHHHhhhhhhhccccccccccccCCcccC-CCCCCHhHHHHhHhHhHhhHHhHHHHHHHHHHHHHHHHcCC
Q 004779 467 QFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGI 545 (731)
Q Consensus 467 ~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~l~P~~~l~~g~ 545 (731)
++.|+||+|+.+++.||+|||+|++||+++|+||+++| .++|++.||++|+++++|| ++++|.++|+++|++||++|+
T Consensus 807 af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~-~~slp~liY~llP~l~LltG~ 885 (1085)
T PLN02400 807 AFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYP-ITSIPLLAYCVLPAFCLITNK 885 (1085)
T ss_pred hhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999976 3789999999999999999 999999999999999999999
Q ss_pred ccccccCchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCc
Q 004779 546 SLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVL 625 (731)
Q Consensus 546 ~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~ 625 (731)
+++|.++++++++|+++++++++++++|++|+|.++++|||+||||+|.++++++++++++++|+|++++++|.||+|..
T Consensus 886 ~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~ 965 (1085)
T PLN02400 886 FIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS 965 (1085)
T ss_pred ccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred chhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhcC--CcchhHHHHHHHHHHHHHHHHHHHHHhcccC
Q 004779 626 DKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKD 703 (731)
Q Consensus 626 ~~~~~~~~~~~~f~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~w~l~~l~p~~~al~~r~~ 703 (731)
+++.. .+++|+|+ |+++++|+++++++|++|+++|+++++..+ .|+.+++++++++|++++++||++|||+|+
T Consensus 966 d~~~~---~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR~- 1040 (1085)
T PLN02400 966 DEDGD---FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQ- 1040 (1085)
T ss_pred ccccc---ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 65431 25899999 999999999999999999999999998655 688999999999999999999999999986
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhhhc
Q 004779 704 KGRISPSAILLSSVFFMIFLFFGSIIL 730 (731)
Q Consensus 704 k~~~p~~~~~~s~~~~~~~~~~~~~~~ 730 (731)
+|+|+||++||++|+++|+++|.-|+
T Consensus 1041 -~r~P~~v~~~s~lla~~~~l~~v~~~ 1066 (1085)
T PLN02400 1041 -NRTPTIVIVWSILLASIFSLLWVRID 1066 (1085)
T ss_pred -CCCceeHHHHHHHHHHHHHHHheecc
Confidence 89999999999999999999998775
No 3
>PLN02436 cellulose synthase A
Probab=100.00 E-value=9.5e-176 Score=1515.83 Aligned_cols=711 Identities=34% Similarity=0.640 Sum_probs=658.0
Q ss_pred CC-CCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhheec
Q 004779 2 DS-PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPV 79 (731)
Q Consensus 2 ~~-~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~l~~aE~~~~~~~~l~~~~~~~p~ 79 (731)
|+ .+|||++++.++.. ++||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+|+|+.||+|+
T Consensus 267 ~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~----~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv 342 (1094)
T PLN02436 267 DEGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVN----DAYGLWLTSVICEIWFAVSWILDQFPKWYPI 342 (1094)
T ss_pred cccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc----ccHHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 44 77899999988874 479999999999999999999998533 3689999999999999999999999999999
Q ss_pred cccCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHH
Q 004779 80 SRTVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREAC 152 (731)
Q Consensus 80 ~r~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~ 152 (731)
+|.+++++|.+ ++++|.|||||+||||++|||.++.|||+|+||+|||.|||.|||+|||++.+|+++|.||+
T Consensus 343 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 422 (1094)
T PLN02436 343 ERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETS 422 (1094)
T ss_pred cceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHH
Confidence 99999998853 24699999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC--------
Q 004779 153 RFAKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------GE-------- 216 (731)
Q Consensus 153 ~fa~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~-------~~-------- 216 (731)
+|||+||||||||+||||+|++||+.+ ++.+++.+++|++||++||++|||||+|||.+.+. ++
T Consensus 423 ~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W 502 (1094)
T PLN02436 423 EFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPW 502 (1094)
T ss_pred HHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccC
Confidence 999999999999999999999999998 55667778899999999999999999999988642 11
Q ss_pred -CCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 004779 217 -YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY 295 (731)
Q Consensus 217 -~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~ 295 (731)
+.+++|||+||||+++++++. |.++.++|+|+||+||||||++||+||||||+++|+||+|||||||+|+|||||
T Consensus 503 ~g~~~~dHp~IIqVll~~~~~~----d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmY 578 (1094)
T PLN02436 503 PGNNVRDHPGMIQVFLGHSGVR----DVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHY 578 (1094)
T ss_pred CCCCCCCCccceEEEecCCCCc----ccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccc
Confidence 357899999999999997643 456788999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHHHHHHHHHHHHHhhhhcCCccccceeEEEecccccc-c
Q 004779 296 CNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-D 374 (731)
Q Consensus 296 ~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~-~ 374 (731)
+|||+++|++||||+||+.++++||||+||+|+|++++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| .
T Consensus 579 iNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~ 658 (1094)
T PLN02436 579 INNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD 658 (1094)
T ss_pred cCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999998 4
Q ss_pred cch---------------------------------------------------------------------hhhhhhcC
Q 004779 375 FTH---------------------------------------------------------------------TELKDTFG 385 (731)
Q Consensus 375 ~~~---------------------------------------------------------------------~~~~~~~~ 385 (731)
|+. ..+.++||
T Consensus 659 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG 738 (1094)
T PLN02436 659 APKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFG 738 (1094)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhc
Confidence 330 01336799
Q ss_pred CchhhhhhhhhhhcccCCCCCCchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCC
Q 004779 386 KSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFR 465 (731)
Q Consensus 386 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~ 465 (731)
+|.++++|+..+.+. .+.+..+++++++|.+|+||.||.+|+||+++||.|+|+|||+.||++||++||||+||+|++
T Consensus 739 ~S~~fi~S~~~~~~~--~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r 816 (1094)
T PLN02436 739 QSPVFVASTLLENGG--VPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKR 816 (1094)
T ss_pred ccHHHHHHHHHhhcC--CCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCc
Confidence 999999999887743 233446788999999999999999999999999999999999999999999999999998777
Q ss_pred CeeEeccCCChHHHhhhhhhhccccccccccccCCcccCC-CCCCHhHHHHhHhHhHhhHHhHHHHHHHHHHHHHHHHcC
Q 004779 466 PQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGP-SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNG 544 (731)
Q Consensus 466 ~~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~-~~l~~~qrl~y~~~~~~~~l~~~~~l~~~l~P~~~l~~g 544 (731)
+++.|+||+|+.+++.||+|||+|++||+++|+||+++|. ++|+++||++|+++++|+ ++++|.++|+++|++||++|
T Consensus 817 ~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~-l~Slp~liY~~lP~l~LL~G 895 (1094)
T PLN02436 817 PAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYP-WTSIPLIVYCTLPAICLLTG 895 (1094)
T ss_pred hhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Confidence 8899999999999999999999999999999999999763 689999999999999999 99999999999999999999
Q ss_pred CccccccCchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCC
Q 004779 545 ISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKV 624 (731)
Q Consensus 545 ~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~ 624 (731)
++++|.++.+++++|+++|+++++++++|++|+|.++++|||+||||+|.++++++++++++++|+|++++++|.||+|.
T Consensus 896 ~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~ 975 (1094)
T PLN02436 896 KFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKA 975 (1094)
T ss_pred CeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhcC--CcchhHHHHHHHHHHHHHHHHHHHHHhccc
Q 004779 625 LDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRK 702 (731)
Q Consensus 625 ~~~~~~~~~~~~~f~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~w~l~~l~p~~~al~~r~ 702 (731)
.+++. .+++|+|+ |+++++|+++++++|++|+++|+.+++..+ .|+.+++++++++|+++++|||++|||+|
T Consensus 976 ~d~~~----~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr- 1049 (1094)
T PLN02436 976 ADDGE----FSELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGK- 1049 (1094)
T ss_pred ccccc----ccceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 76432 13678999 999999999999999999999999998755 68899999999999999999999999955
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhhhc
Q 004779 703 DKGRISPSAILLSSVFFMIFLFFGSIIL 730 (731)
Q Consensus 703 ~k~~~p~~~~~~s~~~~~~~~~~~~~~~ 730 (731)
++|+|++|++||++|+++|+++|+.|+
T Consensus 1050 -~~r~P~~v~v~s~lla~~~~l~~v~~~ 1076 (1094)
T PLN02436 1050 -QDRMPTIILVWSILLASILTLLWVRVN 1076 (1094)
T ss_pred -CCCCCeeehHHHHHHHHHHHHHHeeec
Confidence 559999999999999999999998775
No 4
>PLN02189 cellulose synthase
Probab=100.00 E-value=2.6e-175 Score=1514.27 Aligned_cols=710 Identities=34% Similarity=0.647 Sum_probs=658.2
Q ss_pred CCCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhheeccc
Q 004779 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (731)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~l~~aE~~~~~~~~l~~~~~~~p~~r 81 (731)
..+|||++++.++.. ++||+++++++++++++++||+++.. .++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 235 ~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~R 310 (1040)
T PLN02189 235 ARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPV----HDAIGLWLTSIICEIWFAVSWILDQFPKWFPIDR 310 (1040)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcC----ccchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 378899999988874 47999999999999999999998843 2458999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHh
Q 004779 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (731)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~f 154 (731)
.+++++|.+ ++++|.||||||||||++|||.++.|||+|+||.|||.||+.|||+|||++.+|+++|.||++|
T Consensus 311 ~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 390 (1040)
T PLN02189 311 ETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEF 390 (1040)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999998853 2349999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 004779 155 AKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------Y 217 (731)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~-------~~~---------~ 217 (731)
||+||||||||+||||+|++||+.+ +..+++.+++|++||+.||++|||||+||+.+.+ +++ +
T Consensus 391 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g 470 (1040)
T PLN02189 391 ARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPG 470 (1040)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCC
Confidence 9999999999999999999999998 5566778889999999999999999999998741 222 3
Q ss_pred CCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004779 218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (731)
Q Consensus 218 ~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~ 297 (731)
.+++|||+|+||+++++++. |.++.++|+|+||+||||||++||+||||||+++|+||+|||||||+|+||||++|
T Consensus 471 ~~~~dHp~IiQVll~~~~~~----d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~N 546 (1040)
T PLN02189 471 NNTRDHPGMIQVFLGHSGGH----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYIN 546 (1040)
T ss_pred CCCCCCHHHHHHHhcCCCCc----cccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccC
Confidence 57899999999999997753 44677899999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHHHHHHHHHHHHHhhhhcCCccccceeEEEecccccc-ccc
Q 004779 298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFT 376 (731)
Q Consensus 298 ~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~-~~~ 376 (731)
||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+||+| .|+
T Consensus 547 ns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~ 626 (1040)
T PLN02189 547 NSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPP 626 (1040)
T ss_pred chHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 442
Q ss_pred h------------------------------------------------hhhhhhcCCchhhhhhhhhhhcccCCCCCCc
Q 004779 377 H------------------------------------------------TELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (731)
Q Consensus 377 ~------------------------------------------------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 408 (731)
. .++.++||+|.++++|+..+.+. .+....
T Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~--~~~~~~ 704 (1040)
T PLN02189 627 KGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGG--VPPSSS 704 (1040)
T ss_pred cccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcC--CCCCCC
Confidence 0 12346899999999998877532 233446
Q ss_pred hhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhcc
Q 004779 409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 488 (731)
Q Consensus 409 ~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~ 488 (731)
+.++++||++|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|+||+|+.+++.||+|||+
T Consensus 705 ~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~ 784 (1040)
T PLN02189 705 PAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWAL 784 (1040)
T ss_pred cHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhh
Confidence 78899999999999999999999999999999999999999999999999999887899999999999999999999999
Q ss_pred ccccccccccCCcccCC--CCCCHhHHHHhHhHhHhhHHhHHHHHHHHHHHHHHHHcCCccccccCchhHHHHHHHHHHH
Q 004779 489 GLTDVGLSRFCPLLYGP--SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISA 566 (731)
Q Consensus 489 G~~qi~~~~~~pl~~~~--~~l~~~qrl~y~~~~~~~~l~~~~~l~~~l~P~~~l~~g~~~~~~~~~~~~~~~~~l~~~~ 566 (731)
|++||+++|+||+++|. ++|++.||++|+++++|+ ++++|.++|+++|++||++|.+++|.++.+++++|+++++.+
T Consensus 785 G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~-~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~ 863 (1040)
T PLN02189 785 GSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYP-FTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSI 863 (1040)
T ss_pred hhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHH
Confidence 99999999999999763 679999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchh
Q 004779 567 ICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMF 646 (731)
Q Consensus 567 ~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l 646 (731)
++++++|++|+|.+.++|||+||||+|.++++++++++++++|+|++++++|.||+|..+++.. +++|+|+ |+++
T Consensus 864 ~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~~~----~~ly~f~-~s~l 938 (1040)
T PLN02189 864 FATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDEF----GELYAFK-WTTL 938 (1040)
T ss_pred HHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceecccccccccc----ccceeec-ceeH
Confidence 9999999999999999999999999999999999999999999999999999999998765532 4899999 9999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcC--CcchhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCchhHHHHHHHHHHHHHH
Q 004779 647 LVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLF 724 (731)
Q Consensus 647 ~~P~~~l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~w~l~~l~p~~~al~~r~~k~~~p~~~~~~s~~~~~~~~~ 724 (731)
++|.++++++|++|+++|+++++..+ .|+.+++++++++|++++++||++|||+|| +|+|++|++||++++++|++
T Consensus 939 ~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l 1016 (1040)
T PLN02189 939 LIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVIWSVLLASIFSL 1016 (1040)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHH
Confidence 99999999999999999999998755 578999999999999999999999999997 78899999999999999999
Q ss_pred Hhhhhc
Q 004779 725 FGSIIL 730 (731)
Q Consensus 725 ~~~~~~ 730 (731)
+|+-|+
T Consensus 1017 ~~v~~~ 1022 (1040)
T PLN02189 1017 LWVRID 1022 (1040)
T ss_pred HHheec
Confidence 998775
No 5
>PLN02195 cellulose synthase A
Probab=100.00 E-value=3.7e-175 Score=1506.30 Aligned_cols=709 Identities=35% Similarity=0.644 Sum_probs=656.1
Q ss_pred CCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhheecccc
Q 004779 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (731)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~l~~aE~~~~~~~~l~~~~~~~p~~r~ 82 (731)
.+|||++++.++.. ++||+++++++++++++++||+++..+ ++.|+|+++++||+||+|+|+|+|+.||+|++|.
T Consensus 157 ~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~----~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~ 232 (977)
T PLN02195 157 YEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVD----SAFGLWLTSVICEIWFAFSWVLDQFPKWSPINRE 232 (977)
T ss_pred cCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCccc----cchHHHHHHHHHHHHHHHHHHHhcccccccccce
Confidence 68899999988874 579999999999999999999988433 4569999999999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhh
Q 004779 83 VFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFA 155 (731)
Q Consensus 83 ~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa 155 (731)
+++++|.+ ++++|.|||||+||||++|||.++.|||+|+||.|||.||+.|||+|||++.+|+++|.||++||
T Consensus 233 t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 312 (977)
T PLN02195 233 TYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFA 312 (977)
T ss_pred ECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHH
Confidence 99988853 24699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-CC---------------CC
Q 004779 156 KWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-GE---------------YG 218 (731)
Q Consensus 156 ~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~-~~---------------~~ 218 (731)
|+||||||||+||||+|++||+.+ +..+++..|+|++||+.||++|||||+|||++.++ ++ +.
T Consensus 313 ~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~ 392 (977)
T PLN02195 313 RKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGN 392 (977)
T ss_pred HhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCC
Confidence 999999999999999999999998 44557778999999999999999999999988643 11 35
Q ss_pred CCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCC
Q 004779 219 NSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (731)
Q Consensus 219 ~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~ 298 (731)
+++|||+||||+++++++. |.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+++||||++||
T Consensus 393 ~~~dHp~IIqVll~~~~~~----d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~ 468 (977)
T PLN02195 393 NTRDHPGMIQVFLGETGAR----DIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNN 468 (977)
T ss_pred CCCCCcchhhhhccCCCCc----ccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCc
Confidence 7899999999999886642 456778999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHHHHHHHHHHHHHhhhhcCCccccceeEEEecccccc-ccch
Q 004779 299 PTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFTH 377 (731)
Q Consensus 299 p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~-~~~~ 377 (731)
|++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+||+| .|+.
T Consensus 469 s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~ 548 (977)
T PLN02195 469 SKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPS 548 (977)
T ss_pred HHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCccc
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999998 4321
Q ss_pred --------------------------------------------------------------hhhhhhcCCchhhhhhhh
Q 004779 378 --------------------------------------------------------------TELKDTFGKSNVLINSLH 395 (731)
Q Consensus 378 --------------------------------------------------------------~~~~~~~~~~~~~~~s~~ 395 (731)
.++.++||+|.++++|+.
T Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~ 628 (977)
T PLN02195 549 LPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTL 628 (977)
T ss_pred cccccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHHH
Confidence 023457899999999887
Q ss_pred hhhcccCCCCCCchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCC
Q 004779 396 QSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTN 475 (731)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~ 475 (731)
.+.+..+ ....+.++++||++|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|+||+|
T Consensus 629 ~~~~~~~--~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~ 706 (977)
T PLN02195 629 MENGGVP--ESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPIN 706 (977)
T ss_pred HHhcCCC--CCCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCC
Confidence 7664332 23456789999999999999999999999999999999999999999999999999998778999999999
Q ss_pred hHHHhhhhhhhccccccccccccCCcccCC--CCCCHhHHHHhHhHhHhhHHhHHHHHHHHHHHHHHHHcCCccccccCc
Q 004779 476 LNDLLIQGTRWGSGLTDVGLSRFCPLLYGP--SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSS 553 (731)
Q Consensus 476 l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~--~~l~~~qrl~y~~~~~~~~l~~~~~l~~~l~P~~~l~~g~~~~~~~~~ 553 (731)
+.+++.||+|||+|++||+++|+||+++|. ++|++.||++|+++++|+ ++++|.++|+++|++||++|++++|.++.
T Consensus 707 L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~-~~slp~liY~~lP~l~Ll~G~~i~P~vs~ 785 (977)
T PLN02195 707 LSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYP-FTSLPLIAYCTLPAICLLTGKFIIPTLSN 785 (977)
T ss_pred HHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCeecccchH
Confidence 999999999999999999999999999763 789999999999999999 99999999999999999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhh
Q 004779 554 PSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRY 633 (731)
Q Consensus 554 ~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~~ 633 (731)
+++++|+++|+++++++++|++|+|.++++|||+||||+|.++++++++++++++|+|++++++|.||+|..++++
T Consensus 786 ~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~~---- 861 (977)
T PLN02195 786 LASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDTE---- 861 (977)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccccc----
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999886532
Q ss_pred cccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhcC--CcchhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCchhH
Q 004779 634 EMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSA 711 (731)
Q Consensus 634 ~~~~f~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~w~l~~l~p~~~al~~r~~k~~~p~~~ 711 (731)
..++|+|+ |+++++|.++++++|++|+++|+++++..+ .|+.+++++++++|++++++||++||++|| +|+|++|
T Consensus 862 ~~~~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v 938 (977)
T PLN02195 862 FGELYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQ--NRTPTIV 938 (977)
T ss_pred hhcceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeee
Confidence 13688999 999999999999999999999999998755 688999999999999999999999999997 7889999
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 004779 712 ILLSSVFFMIFLFFGSIIL 730 (731)
Q Consensus 712 ~~~s~~~~~~~~~~~~~~~ 730 (731)
++||++++++|+++|.-|+
T Consensus 939 ~v~s~ll~~~~~l~~v~~~ 957 (977)
T PLN02195 939 VLWSVLLASVFSLVWVKIN 957 (977)
T ss_pred hHHHHHHHHHHHHHHeecc
Confidence 9999999999999998775
No 6
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=2.2e-173 Score=1498.46 Aligned_cols=711 Identities=34% Similarity=0.634 Sum_probs=655.0
Q ss_pred CCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhheecccc
Q 004779 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (731)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~l~~aE~~~~~~~~l~~~~~~~p~~r~ 82 (731)
.+|||++++.++.. ++||++++++++++++++.||+++ ++.++.|+|+++++||+||+|+|+|+|+.||+|++|.
T Consensus 192 ~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~----~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~ 267 (1044)
T PLN02915 192 RQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT----PAYDAYPLWLISVICEIWFALSWILDQFPKWFPINRE 267 (1044)
T ss_pred CCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC----cCCCchHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence 68899999988874 579999999999999999999998 3345689999999999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhh
Q 004779 83 VFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFA 155 (731)
Q Consensus 83 ~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa 155 (731)
+++++|.+ ++++|.|||||+||||++|||.+++|||+|+||+|||.|||.|||+|||++.+|+++|.||++||
T Consensus 268 t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 347 (1044)
T PLN02915 268 TYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFA 347 (1044)
T ss_pred cCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHH
Confidence 99998863 23599999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------CC
Q 004779 156 KWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------GE---------YG 218 (731)
Q Consensus 156 ~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~-------~~---------~~ 218 (731)
|+||||||||+||||+|++||+.+ ++.+++.+++|++||++||++|||||+|||.+.+. |+ +.
T Consensus 348 k~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~ 427 (1044)
T PLN02915 348 RRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGN 427 (1044)
T ss_pred HhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCC
Confidence 999999999999999999999998 55667778999999999999999999999987543 21 34
Q ss_pred CCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCC
Q 004779 219 NSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (731)
Q Consensus 219 ~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~ 298 (731)
..+|||+||||+++++++. |.++.++|+|+||+||||||++||+||||||+++|+||+|||+|||+|+|||||+||
T Consensus 428 ~~~dHp~IIqVll~~~~~~----d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nn 503 (1044)
T PLN02915 428 NTRDHPGMIQVYLGSEGAL----DVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINN 503 (1044)
T ss_pred CCCCCccceEEeecCCCCc----ccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCc
Confidence 5689999999999986643 456778999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHHHHHHHHHHHHHhhhhcCCccccceeEEEecccccc-ccch
Q 004779 299 PTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFTH 377 (731)
Q Consensus 299 p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~-~~~~ 377 (731)
|+++|++||||+||+.++++||||+||+|+|++++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| .|+.
T Consensus 504 s~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~ 583 (1044)
T PLN02915 504 SKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPV 583 (1044)
T ss_pred chhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998 4431
Q ss_pred --------------------------------------------------------------------------------
Q 004779 378 -------------------------------------------------------------------------------- 377 (731)
Q Consensus 378 -------------------------------------------------------------------------------- 377 (731)
T Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (1044)
T PLN02915 584 SEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEG 663 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence
Q ss_pred ---------------hhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhhcccccceeeccccccccccccCCCcc
Q 004779 378 ---------------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVS 442 (731)
Q Consensus 378 ---------------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svt 442 (731)
..+.++||+|.++++|+..+.+. .+.+..+++++++|.+|+||.||.+|+||+++||.|+|+|
T Consensus 664 ~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~--~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvT 741 (1044)
T PLN02915 664 LEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGG--LPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVT 741 (1044)
T ss_pred cccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcC--CCCCCCcHHHHHHHHhccccCCCccCchhHhhCccccccc
Confidence 01335789999999988775432 2334567889999999999999999999999999999999
Q ss_pred chHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhccccccccccccCCcccC-CCCCCHhHHHHhHhHhH
Q 004779 443 EDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSF 521 (731)
Q Consensus 443 ED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~~ 521 (731)
||+.||++||++||||+||+|+++++.|++|+|+.++++||+|||+|++||+++++||++++ .++|+++||++|+++++
T Consensus 742 EDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~ 821 (1044)
T PLN02915 742 EDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIV 821 (1044)
T ss_pred cHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHH
Confidence 99999999999999999998877899999999999999999999999999999999999975 37999999999999999
Q ss_pred hhHHhHHHHHHHHHHHHHHHHcCCccccccCchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHH
Q 004779 522 FPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFY 601 (731)
Q Consensus 522 ~~~l~~~~~l~~~l~P~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~ 601 (731)
|+ +.++|.++|+++|++||++|++++|.++.....+|++++++++++++++++|+|.++++|||+||||+|.+++++++
T Consensus 822 yp-~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lf 900 (1044)
T PLN02915 822 YP-FTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLF 900 (1044)
T ss_pred HH-HHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHHH
Confidence 99 99999999999999999999999998777666677788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhc--CCcchhHH
Q 004779 602 GSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAV--GNWDKLFP 679 (731)
Q Consensus 602 ~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~--~~~~~~~~ 679 (731)
+++++++++||+++++|+||+|+.+.+.++. +++|+|+ |+++++|+++++++|++|+++|+++++.. +.|+.+++
T Consensus 901 avl~~iLKvLg~se~~F~VTsK~~d~~~d~~--~ely~F~-~S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l~~ 977 (1044)
T PLN02915 901 AVFQGLLKVLGGVDTNFTVTSKAADDEADEF--GELYLFK-WTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFG 977 (1044)
T ss_pred HHHHHHHHHhcccCCcceecCCccccchhhh--ccceeec-ceehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH
Confidence 9999999999999999999999986554332 4899999 99999999999999999999999998764 45788999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCchhHHHHHHHHHHHHHHHhhhhc
Q 004779 680 QLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 730 (731)
Q Consensus 680 ~~~~~~w~l~~l~p~~~al~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~~~ 730 (731)
++++++|++++++||++||++|+ +|+|++|++||++++++|+++|+-|+
T Consensus 978 ~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll~v~~~ 1026 (1044)
T PLN02915 978 KLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLVWVRID 1026 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHHHheec
Confidence 99999999999999999999996 78899999999999999999998775
No 7
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=2.4e-172 Score=1465.77 Aligned_cols=700 Identities=40% Similarity=0.752 Sum_probs=646.5
Q ss_pred CCCCCceeeeecCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhheeccc
Q 004779 2 DSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (731)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~l~~aE~~~~~~~~l~~~~~~~p~~r 81 (731)
.+.+||||+++.+++ .+||+++++++++++++++||+++..... ..|.|+++++||+||+|+|+++|+.||+|++|
T Consensus 9 ~~~~pL~~~~~~~~~-~~~R~~~~~~~~~i~~ll~~r~~~~~~~~---~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r 84 (734)
T PLN02893 9 TGAPPLHTCHPMRRT-IANRVFAVVYSCAILALLYHHVIALLHST---TTLITLLLLLADIVLAFMWATTQAFRMCPVHR 84 (734)
T ss_pred CCCCCceeeeecCCc-hHHHHHHHHHHHHHHHHHHHHhccccccc---chHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 357899999998885 57999999999999999999999876532 27899999999999999999999999999999
Q ss_pred cCCCCCCCC---CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcc
Q 004779 82 TVFPERLPE---DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWW 158 (731)
Q Consensus 82 ~~~~~~l~~---~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w 158 (731)
.+++|+|.+ ++++|.||||||||||++|||.++.|||+|+|+.|||.||+.|||+|||++++|+++|.||++|||+|
T Consensus 85 ~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~W 164 (734)
T PLN02893 85 RVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHW 164 (734)
T ss_pred ccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhh
Confidence 999999874 45799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCcccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCC--------------------CC
Q 004779 159 LPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGE--------------------YG 218 (731)
Q Consensus 159 ~pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~--------------------~~ 218 (731)
+||||||+||||+|++||+.+. +++.+||+.||++|||||+|||++.+.+. ++
T Consensus 165 vPFCrk~~ie~R~P~~YF~~~~-------~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~ 237 (734)
T PLN02893 165 LPFCKKNKIVERCPEAYFSSNS-------HSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKF 237 (734)
T ss_pred cccccccCCCcCCHHHHhccCC-------CccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCC
Confidence 9999999999999999999872 34678999999999999999999853322 35
Q ss_pred CCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCC
Q 004779 219 NSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (731)
Q Consensus 219 ~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~ 298 (731)
+++|||+||||++|++++. |.++.++|+++|++||||||++||+||||||+++++|++|||||||+|+||||++||
T Consensus 238 ~~~dH~~ivqV~l~~~~~~----d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~ 313 (734)
T PLN02893 238 TRQDHPTVIQVLLESGKDK----DITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSND 313 (734)
T ss_pred CCCCCCceeeeeccCCCcc----chhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCc
Confidence 7899999999999997643 446678999999999999999999999999999999999999999999999999989
Q ss_pred hHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHHHHHHHHHHHHHhhhhcCCccccceeEEEeccccccccch-
Q 004779 299 PTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH- 377 (731)
Q Consensus 299 p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~- 377 (731)
|++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||+++++|+||+||++||||||+|||+||+|.+..
T Consensus 314 p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~ 393 (734)
T PLN02893 314 PQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSL 393 (734)
T ss_pred hhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999984321
Q ss_pred -hhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCC
Q 004779 378 -TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGW 456 (731)
Q Consensus 378 -~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gw 456 (731)
.+....++++. ....+..+++++++|++|+||.||++|.||+++||.|+|+|||++||++||++||
T Consensus 394 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GW 460 (734)
T PLN02893 394 ILPEIPELNPDH-------------LVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGW 460 (734)
T ss_pred cchhhhhccccc-------------ccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCC
Confidence 00011111110 0122345678999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCeeEeccCCChHHHhhhhhhhccccccccccccCCcccCCCCCCHhHHHHhHhHhHhhHHhHHHHHHHHHH
Q 004779 457 TSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATL 536 (731)
Q Consensus 457 rs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~l~ 536 (731)
||+||+|+++++.|++|+|+.++++||+|||+|++|++++|+||+++|.++|++.||++|++.++|+ ++++|.++|+++
T Consensus 461 rSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~-~~slp~liY~~~ 539 (734)
T PLN02893 461 KSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWP-IWSIPITIYAFL 539 (734)
T ss_pred cEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHH-HhHHHHHHHHHH
Confidence 9999988778999999999999999999999999999999999999877899999999999999999 999999999999
Q ss_pred HHHHHHcCCccccccCchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 004779 537 PQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKA 616 (731)
Q Consensus 537 P~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~ 616 (731)
|++||++|++++|+++.+|+++|++++++.++++++|++|+|.++++|||+||+|++.++++++++++++++|+||++++
T Consensus 540 P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~ 619 (734)
T PLN02893 540 PQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTF 619 (734)
T ss_pred HHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred ceeeccCCcchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCcchhHHHHHHHHHHHHHHHHHHH
Q 004779 617 SFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVE 696 (731)
Q Consensus 617 ~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~~~~~~~~~~~~~~~w~l~~l~p~~~ 696 (731)
+|+||+|+.+.++.++|++|+|+|+.++|+++|+++++++|++|+++|+++++.++.++++++++++|+|++++++||++
T Consensus 620 ~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~ 699 (734)
T PLN02893 620 GFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAVVNCWPIYE 699 (734)
T ss_pred ceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888788899999999997799999999999999999999999998777788889999999999999999999
Q ss_pred HHhcccCCCCCchhHHHHHHHHHHHHHHHhhhhc
Q 004779 697 GMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 730 (731)
Q Consensus 697 al~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~~~ 730 (731)
|+++||||||||+||++||++|+++++.+.+++.
T Consensus 700 gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~~~~ 733 (734)
T PLN02893 700 AMVLRTDDGKLPVKITLISIVLAWALYLASSFAF 733 (734)
T ss_pred HHhccCCCCCCCccHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999988875
No 8
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=4.5e-173 Score=1497.11 Aligned_cols=715 Identities=31% Similarity=0.570 Sum_probs=648.9
Q ss_pred CCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhheecccc
Q 004779 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (731)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~l~~aE~~~~~~~~l~~~~~~~p~~r~ 82 (731)
.+|||++++.++.. ++||+++++++++++++|.||+++ ++.++.|+|+++++||+||+|+|+|+|+.||+|++|.
T Consensus 267 ~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~----~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~ 342 (1135)
T PLN02248 267 WRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRN----PNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRA 342 (1135)
T ss_pred CCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcC----CCCcchHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 47799999988874 469999999999999999999988 3345699999999999999999999999999999999
Q ss_pred CCCCCCCC------------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHH
Q 004779 83 VFPERLPE------------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMRE 150 (731)
Q Consensus 83 ~~~~~l~~------------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~E 150 (731)
+++++|.+ ++++|.||||||||||++|||.++.|||+|+||.|||.|||.|||+|||++.+|+++|.|
T Consensus 343 t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~E 422 (1135)
T PLN02248 343 TDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAE 422 (1135)
T ss_pred cCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHH
Confidence 99887743 236999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc---------------
Q 004779 151 ACRFAKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED--------------- 214 (731)
Q Consensus 151 a~~fa~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~--------------- 214 (731)
|++|||+||||||||+||||+||+||+.+ +..+++..++|++||++||++|||||+|||.+.+.
T Consensus 423 Aa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~ 502 (1135)
T PLN02248 423 AASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIK 502 (1135)
T ss_pred HHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHH
Confidence 99999999999999999999999999988 55557778999999999999999999999987320
Q ss_pred ----------C------------C----------------CCCCCCCcchhhhhhcccCcchh----------hhhcccc
Q 004779 215 ----------G------------E----------------YGNSQNHSTIIEIIQETFGESET----------IRQADLV 246 (731)
Q Consensus 215 ----------~------------~----------------~~~~~~h~~i~~v~~~~~~~~~~----------~~~~~~~ 246 (731)
+ | +++++|||+||||++++++.+++ +++..+.
T Consensus 503 ~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~ 582 (1135)
T PLN02248 503 AKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDI 582 (1135)
T ss_pred hhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCccccccccccccccc
Confidence 0 1 35789999999999987662221 2234456
Q ss_pred CCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCce
Q 004779 247 EMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQK 326 (731)
Q Consensus 247 ~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~ 326 (731)
++|+|+||+||||||++||+||||||+++|+|++|||||||+|+||||++|||++++++||||+||+ ++++||||+||+
T Consensus 583 ~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQr 661 (1135)
T PLN02248 583 RLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQR 661 (1135)
T ss_pred ccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcc
Confidence 8999999999999999999999999999999999999999999999999999999999999999996 899999999999
Q ss_pred eccCCCCchHHHHHHHHHHHHHHhhhhcCCccccceeEEEecccccc-ccchh---------------------------
Q 004779 327 FHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFTHT--------------------------- 378 (731)
Q Consensus 327 f~n~~~~d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~-~~~~~--------------------------- 378 (731)
|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+||+| .|++.
T Consensus 662 F~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1135)
T PLN02248 662 FEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEE 741 (1135)
T ss_pred cCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999 45321
Q ss_pred -------------hhhhhcCCchhhhhhhhhhhcccC------------------CCCCCchhhHHHhhcccccceeecc
Q 004779 379 -------------ELKDTFGKSNVLINSLHQSYKQNN------------------ANGENFSNVLQEETGVLASCSYEHQ 427 (731)
Q Consensus 379 -------------~~~~~~~~~~~~~~s~~~~~~~~~------------------~~~~~~~~~~~~~~~~v~~c~ye~~ 427 (731)
.+.++||+|..+++|...+..+.. .+.+..+.++++||++|+||.||++
T Consensus 742 ~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~ 821 (1135)
T PLN02248 742 QPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDK 821 (1135)
T ss_pred cccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccC
Confidence 124589999999998866542100 1233456789999999999999999
Q ss_pred ccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhccccccccccccCCcccCCCC
Q 004779 428 TKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSR 507 (731)
Q Consensus 428 t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~ 507 (731)
|+||+++||.|+|+|||+.||++||++||||+||+++++++.|++|+|+.++++||+|||+|++||++++++|++.+ ++
T Consensus 822 T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~ 900 (1135)
T PLN02248 822 TEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RR 900 (1135)
T ss_pred CchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CC
Confidence 99999999999999999999999999999999998778999999999999999999999999999999999999875 79
Q ss_pred CCHhHHHHhHhHhHhhHHhHHHHHHHHHHHHHHHHcCCccccccCchhHHHHH-HHHHHHHHHHHHHHHHhCCcchhhhh
Q 004779 508 MSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFS-FIFISAICKHLQEVISTGGSIYAWRN 586 (731)
Q Consensus 508 l~~~qrl~y~~~~~~~~l~~~~~l~~~l~P~~~l~~g~~~~~~~~~~~~~~~~-~l~~~~~~~~ll~~~~~g~~~~~ww~ 586 (731)
|++.||++|+++++|+ +.+++.++|+++|++||++|++++|+. .+++++++ .+++.++++++++++|+|.++++|||
T Consensus 901 Lsl~QRL~Yl~~~lyp-f~Slp~liY~llP~l~LLtGi~~~p~~-~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWr 978 (1135)
T PLN02248 901 LKFLQRIAYLNVGIYP-FTSIFLIVYCFLPALSLFSGQFIVQTL-NVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWR 978 (1135)
T ss_pred CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCcccccc-cHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhh
Confidence 9999999999999999 999999999999999999999999986 45555554 44577788999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHH
Q 004779 587 EQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFI 666 (731)
Q Consensus 587 ~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l~~P~~~l~~l~l~al~~g~~ 666 (731)
+||||+|.++++++++++++++|+|++++++|+||+|+.+.+.+++| +++|+|+ |+++++|+++++++|++|+++|++
T Consensus 979 nQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~ 1056 (1135)
T PLN02248 979 NEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVS 1056 (1135)
T ss_pred hhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCccccccccccc-chheecC-cchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887766677 5899999 999999999999999999999999
Q ss_pred HHhhc--CCcchhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCchhHHHHHHHHHHHHHHHhhhhc
Q 004779 667 RIIAV--GNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 730 (731)
Q Consensus 667 r~~~~--~~~~~~~~~~~~~~w~l~~l~p~~~al~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~~~ 730 (731)
|++.+ +.|+.+++++++++|+++++|||++|||+| |+|+|++|++||++++++++++|.-|+
T Consensus 1057 R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR--~gr~P~iv~v~s~ll~~~~sll~v~~~ 1120 (1135)
T PLN02248 1057 RTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGR--RGRTPTIVYVWSGLLSITISLLWVAIS 1120 (1135)
T ss_pred HHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeehHHHHHHHHHHHHHHheEec
Confidence 99864 346788999999999999999999999999 888899999999999999999998775
No 9
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=6.6e-173 Score=1461.84 Aligned_cols=699 Identities=33% Similarity=0.595 Sum_probs=640.6
Q ss_pred CCCCCCceeeeecCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhheecc
Q 004779 1 MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVS 80 (731)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~l~~aE~~~~~~~~l~~~~~~~p~~ 80 (731)
|.+++|||++++.+++ ++|+..+++++++++|+.||+++.++. .+.|+.+++||+|++++|+|+|+.+|+|++
T Consensus 5 ~~~~~pL~~~~~~~~~--~~r~~~~~vl~~~~~~l~~R~~~~~~~-----~~~W~~~~~~E~wf~~~WlL~q~~kw~pv~ 77 (756)
T PLN02190 5 SSSLPPLCERISHKSY--FLRAVDLTILGLLFSLLLYRILHMSEN-----DTVWLVAFLCESCFSFVWLLITCIKWSPAE 77 (756)
T ss_pred cCCCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHHhCCCcc-----cHHHHHHHHHHHHHHHHHHHhccceeeecC
Confidence 3468899999998887 699999999999999999999998764 247888999999999999999999999999
Q ss_pred ccCCCCCCCC-CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcch
Q 004779 81 RTVFPERLPE-DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWL 159 (731)
Q Consensus 81 r~~~~~~l~~-~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~ 159 (731)
|.++|++|++ -+++|.||||||||||++|||++|+||++|++++|||+||+.|||+|||++++|+++|.||++|||+|+
T Consensus 78 r~~~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~Wv 157 (756)
T PLN02190 78 YKPYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWV 157 (756)
T ss_pred CCCCcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhc
Confidence 9999999875 346999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCcccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC-----CCCCCCCcchh
Q 004779 160 PFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE-----YGNSQNHSTII 227 (731)
Q Consensus 160 pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~-------~~~-----~~~~~~h~~i~ 227 (731)
||||||+||||+||+||+.+. +.+.+++|++||+.||++|||||+||+++.+ +++ +++++|||+||
T Consensus 158 PFCrK~~IepRaPe~YF~~~~--~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~ii 235 (756)
T PLN02190 158 PFCKKYNVRVRAPFRYFLNPP--VATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIV 235 (756)
T ss_pred ccccccCCCcCCHHHHhcCCC--CCCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccce
Confidence 999999999999999999853 2234579999999999999999999999742 111 57899999999
Q ss_pred hhhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHH
Q 004779 228 EIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (731)
Q Consensus 228 ~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~ 307 (731)
||++|++++ +.++.++|+++||+|||||+++||+||||||+++|+||+|||+|||+|+|||||+|||++++++||
T Consensus 236 qVll~~~~~-----~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmC 310 (756)
T PLN02190 236 KVVWENKGG-----VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMC 310 (756)
T ss_pred EEEecCCCC-----ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhh
Confidence 999999654 235778999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCC-CcEEEEccCceeccCCCCchHHHHHHHHHHHHHHhhhhcCCccccceeEEEecccccc-ccch--------
Q 004779 308 FHLDPKIS-SSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFTH-------- 377 (731)
Q Consensus 308 ~f~D~~~~-~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~-~~~~-------- 377 (731)
||+||+.+ +++||||+||+|+ |+|+|++++||++.++|.||+|||+|+||||+|||+|||| +|+.
T Consensus 311 f~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~ 385 (756)
T PLN02190 311 IFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLS 385 (756)
T ss_pred hhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCccccccccccc
Confidence 99998755 4899999999998 7899999999999999999999999999999999999999 5542
Q ss_pred ----------hhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhhcccccceeeccccccccccccCCCccchHHH
Q 004779 378 ----------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFT 447 (731)
Q Consensus 378 ----------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t 447 (731)
.++.++||+|.++++|+..+... ..+++...++++++|++|+||.||++|+||+++||.|+|+|||+.|
T Consensus 386 ~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~-~~~~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~T 464 (756)
T PLN02190 386 SVATREFLAEDSLAREFGNSKEMVKSVVDALQR-KPNPQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNT 464 (756)
T ss_pred ccccccccchhhhhhhcCCcHHHHHHHHHHhcc-CCCCccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHH
Confidence 12458899999999999776632 2233445678999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhccccccccccccCCcccC-CCCCCHhHHHHhHhHhHhhHHh
Q 004779 448 GFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLY 526 (731)
Q Consensus 448 ~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~ 526 (731)
|++||++||||+||+|+++++.|++|+++.+.+.||+||++|++|++++|+||++++ .++|++.||++|+++.+ | ++
T Consensus 465 Gl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~-~~ 542 (756)
T PLN02190 465 SIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-C-LR 542 (756)
T ss_pred HHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-H-HH
Confidence 999999999999999888999999999999999999999999999999999999975 58999999999999877 7 99
Q ss_pred HHHHHHHHHHHHHHHHcCCccccccCchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHH
Q 004779 527 CLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDT 606 (731)
Q Consensus 527 ~~~~l~~~l~P~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~a 606 (731)
++|+++|+++|++||++|.+++|.. +|+++++++++..++++++|++|+|+++++|||+||||+|.++++++++++++
T Consensus 543 sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~ 620 (756)
T PLN02190 543 SIPELIYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDI 620 (756)
T ss_pred HHHHHHHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHH
Confidence 9999999999999999999999964 67888888888889999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcceeeccCCcc-------------hhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhc--
Q 004779 607 ILKLLGLRKASFLPTNKVLD-------------KEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAV-- 671 (731)
Q Consensus 607 l~~~l~~~~~~F~VT~K~~~-------------~~~~~~~~~~~f~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~-- 671 (731)
++|+||+++++|+||+|..+ ++++++|++|+|+|+ |+++++|.++++++|++|+++|+++++..
T Consensus 621 ~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~ 699 (756)
T PLN02190 621 ILKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSSY 699 (756)
T ss_pred HHHHhccccceEEEeeccccccccccccccccccccchhhhcceeEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999754 345678899999999 99999999999999999999999987642
Q ss_pred ---CCcchhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCchhHHHHHHHHHHHHHHHh
Q 004779 672 ---GNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFG 726 (731)
Q Consensus 672 ---~~~~~~~~~~~~~~w~l~~l~p~~~al~~r~~k~~~p~~~~~~s~~~~~~~~~~~ 726 (731)
+.++.+ +++++|+|+|++++||++||+ |||||+||+||+++|++|+++|+++.
T Consensus 700 s~~~~~~~l-~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~~~~s~~l~~~f~~~~ 755 (756)
T PLN02190 700 SHGGGGSGL-AEACGCILVVMLFLPFLKGLF-EKGKYGIPLSTLSKAAFLAVLFVVFS 755 (756)
T ss_pred ccCcccccH-HHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhHHHHHHHHHHHHHhcc
Confidence 345554 999999999999999999998 99999999999999999999999875
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=2.1e-161 Score=1365.23 Aligned_cols=622 Identities=44% Similarity=0.791 Sum_probs=584.3
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccc
Q 004779 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (731)
Q Consensus 97 VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (731)
||||||||||++|||.++.|||+|+|++|||.|||+|||+|||++++|+++|.||++|||+||||||||+||||+|++||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------CCCCCCCcchhhhhhcccCcchh
Q 004779 177 SEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------YGNSQNHSTIIEIIQETFGESET 239 (731)
Q Consensus 177 ~~~-~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~-------~~~---------~~~~~~h~~i~~v~~~~~~~~~~ 239 (731)
+.+ +..+++.+++|++||++||++|||||+|||.+.+ +++ +.+++|||+||||+++++++.
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~-- 158 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGK-- 158 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCc--
Confidence 998 6777888999999999999999999999998743 232 467999999999999987754
Q ss_pred hhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEE
Q 004779 240 IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLA 319 (731)
Q Consensus 240 ~~~~~~~~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg 319 (731)
|.++.++|+|+|++|||||+++||+||||||+++|+|++|||||||+|+|||||.|||+.++++||||+||+.++++|
T Consensus 159 --~~~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~ 236 (720)
T PF03552_consen 159 --DVDGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIA 236 (720)
T ss_pred --ccccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeE
Confidence 667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCceeccCCCCchHHHHHHHHHHHHHHhhhhcCCccccceeEEEecccccc-ccch---------------------
Q 004779 320 FVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFTH--------------------- 377 (731)
Q Consensus 320 ~VQ~Pq~f~n~~~~d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~-~~~~--------------------- 377 (731)
|||+||+|+|++++|+|+|++++||+++++|+||+|||+|+||||+|||+||+| .|++
T Consensus 237 ~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~ 316 (720)
T PF03552_consen 237 FVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKK 316 (720)
T ss_pred EEeCCceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccc
Confidence 999999999999999999999999999999999999999999999999999999 5552
Q ss_pred --------------------------------------------hhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHH
Q 004779 378 --------------------------------------------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 413 (731)
Q Consensus 378 --------------------------------------------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 413 (731)
.+++++||+|.++++|+..+.+ ..+++..+.+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~--~~~~~~~~~~~L 394 (720)
T PF03552_consen 317 KKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQG--GVPRSPSPASLL 394 (720)
T ss_pred ccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhc--CCCCCCChHHHH
Confidence 0345789999999999986543 234456678999
Q ss_pred HhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhccccccc
Q 004779 414 EETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDV 493 (731)
Q Consensus 414 ~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qi 493 (731)
+||.+|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|.||+|+.+.+.|++|||.|++||
T Consensus 395 ~EA~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI 474 (720)
T PF03552_consen 395 EEAIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEI 474 (720)
T ss_pred HHHHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEee
Confidence 99999999999999999999999999999999999999999999999999899999999999999999999999999999
Q ss_pred cccccCCcccC-CCCCCHhHHHHhHhHhHhhHHhHHHHHHHHHHHHHHHHcCCccccccCchhHHHHHHHHHHHHHHHHH
Q 004779 494 GLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQ 572 (731)
Q Consensus 494 ~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~l~P~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~~~~ll 572 (731)
+++|+||++++ +++|++.||++|+++++|+ ++++|.++|+++|++||++|++++|+++.+++++|+++|+++++++++
T Consensus 475 ~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~yp-l~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~ll 553 (720)
T PF03552_consen 475 FFSRHCPLWYGYGGRLKFLQRLAYLNYMLYP-LTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLL 553 (720)
T ss_pred ehhcCCchhccCCCCCcHHHHHHHHHHhhhH-HHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHH
Confidence 99999999997 6899999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhhHHHHH
Q 004779 573 EVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVS 652 (731)
Q Consensus 573 ~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l~~P~~~ 652 (731)
|++|+|+++++|||+||||+|.++++++++++++++|++|+++++|.||+|+.++++++.+ ++|+|+ |+++++|.++
T Consensus 554 E~~wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~~--ely~f~-wS~LfiP~tT 630 (720)
T PF03552_consen 554 EFRWSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKYA--ELYIFK-WSPLFIPPTT 630 (720)
T ss_pred HHHhccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeeccccccccccccc--cccccc-ccchhhHHHH
Confidence 9999999999999999999999999999999999999999999999999999875543333 678888 8999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcC--CcchhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCchhHHHHHHHHHHHHHHHhhhhc
Q 004779 653 LMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 730 (731)
Q Consensus 653 l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~w~l~~l~p~~~al~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~~~ 730 (731)
++++|++|+++|+++++..+ +|+++++++++++|++++++||++||++||+ |+|+||++||++||++|+++|+-|+
T Consensus 631 llilNLva~v~Gi~r~i~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~llwv~i~ 708 (720)
T PF03552_consen 631 LLILNLVAFVVGISRAINSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLLWVRID 708 (720)
T ss_pred HHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHHheecc
Confidence 99999999999999988654 6889999999999999999999999999976 5899999999999999999999875
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=2.6e-74 Score=678.51 Aligned_cols=489 Identities=24% Similarity=0.333 Sum_probs=399.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhheeccccCCCCCCCC-CCCCCceE
Q 004779 20 NRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPE-DDKLPAID 98 (731)
Q Consensus 20 ~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~l~~aE~~~~~~~~l~~~~~~~p~~r~~~~~~l~~-~~~~P~Vd 98 (731)
.-+++++.+++.+.|++||++.|+|..++.+.+++++++++|+++.+..+++.+..++|..|++. .++. .+.+|+||
T Consensus 186 ~~~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~--~~~~~~~~~P~Vs 263 (852)
T PRK11498 186 ALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPV--PLPKDMSLWPTVD 263 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC--CCCcccCCCCcEE
Confidence 33445556666888999999999998767778888999999999998888888888888877642 2333 45789999
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (731)
|+||| |||+.+++++|+.+++++|||++|++|||+|||++|.|- ++ |+++
T Consensus 264 ViIPt---YNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~-------~l-------a~~~------------- 313 (852)
T PRK11498 264 IFVPT---YNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFR-------QF-------AQEV------------- 313 (852)
T ss_pred EEEec---CCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHH-------HH-------HHHC-------------
Confidence 99999 999989999999999999999999999999999998431 11 1111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccC
Q 004779 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (731)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 258 (731)
++.|++|++
T Consensus 314 -----------------------------------------------------------------------~v~yI~R~~ 322 (852)
T PRK11498 314 -----------------------------------------------------------------------GVKYIARPT 322 (852)
T ss_pred -----------------------------------------------------------------------CcEEEEeCC
Confidence 367998876
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHh-cCCCCCCcEEEEccCceeccCCCCc---
Q 004779 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYD--- 334 (731)
Q Consensus 259 ~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d--- 334 (731)
| .|+||||+|+|+++ ++||||+++|||+++. ||+|++++++| .|| ++|+||+||.|+|.++.+
T Consensus 323 n----~~gKAGnLN~aL~~----a~GEyIavlDAD~ip~-pdfL~~~V~~f~~dP----~VglVQtp~~f~n~dp~~rnl 389 (852)
T PRK11498 323 H----EHAKAGNINNALKY----AKGEFVAIFDCDHVPT-RSFLQMTMGWFLKDK----KLAMMQTPHHFFSPDPFERNL 389 (852)
T ss_pred C----CcchHHHHHHHHHh----CCCCEEEEECCCCCCC-hHHHHHHHHHHHhCC----CeEEEEcceeccCCchHHHhh
Confidence 4 68999999999999 8999999999999987 99999999876 566 599999999999853211
Q ss_pred ----hHHHHHHHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchh
Q 004779 335 ----IYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSN 410 (731)
Q Consensus 335 ----~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 410 (731)
.+.++.+.||+.++.|.+.++++++||+++++||+++++
T Consensus 390 ~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLee------------------------------------- 432 (852)
T PRK11498 390 GRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDE------------------------------------- 432 (852)
T ss_pred HHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHHH-------------------------------------
Confidence 123455689999999999999999999999999999963
Q ss_pred hHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhcccc
Q 004779 411 VLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 490 (731)
Q Consensus 411 ~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~ 490 (731)
.|||+++++|||+++++++|++||+++|+++ +.+.|++|+|++++++||.||++|+
T Consensus 433 ----------------------VGGfd~~titED~dlslRL~~~Gyrv~yl~~--~~a~glaPesl~~~~~QR~RWarG~ 488 (852)
T PRK11498 433 ----------------------IGGIAVETVTEDAHTSLRLHRRGYTSAYMRI--PQAAGLATESLSAHIGQRIRWARGM 488 (852)
T ss_pred ----------------------hcCCCCCccCccHHHHHHHHHcCCEEEEEec--cceeEECCCCHHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999986 8999999999999999999999999
Q ss_pred ccccccccCCcccCCCCCCHhHHHHhHhHhHhhHHhHHHHHHHHHHHHHHHHcCCccccccCchhHHHHHHHHHHHHHHH
Q 004779 491 TDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKH 570 (731)
Q Consensus 491 ~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~l~P~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~~~~ 570 (731)
+|+++ ++||++. +++++.||++|+++++|+ +.++|.++|+++|++|+++|+.++.+ ++..++++ ++|+++..
T Consensus 489 lQi~r-~~~pl~~--~gL~~~qRl~y~~~~l~~-l~g~~~l~~l~~Pl~~l~~gi~~i~a---~~~~i~~y-~lP~~~~~ 560 (852)
T PRK11498 489 VQIFR-LDNPLTG--KGLKLAQRLCYANAMLHF-LSGIPRLIFLTAPLAFLLLHAYIIYA---PALMIALF-VLPHMIHA 560 (852)
T ss_pred HHHHH-HhChhcc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChheeC---ChHHHHHH-HHHHHHHH
Confidence 99997 5789875 799999999999999888 99999999999999999999988753 23333332 35655444
Q ss_pred HHH-HHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhhHH
Q 004779 571 LQE-VISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVP 649 (731)
Q Consensus 571 ll~-~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l~~P 649 (731)
.+. ...+|.....||++ ++.++ .+++....++..++++++.+|+||||++..++ +.|+|+ +..|
T Consensus 561 ~l~~~~~~g~~r~~~wse----iye~v-~a~~l~~~~~~~ll~p~~~~F~VTpKg~~~~~------~~~~~~----~~~P 625 (852)
T PRK11498 561 SLTNSRIQGKYRHSFWSE----IYETV-LAWYIAPPTTVALFNPHKGKFNVTAKGGLVEE------EYVDWV----ISRP 625 (852)
T ss_pred HHHHHHhcCcchHhHHHH----HHHHH-HHHHHHHHHHHHHcCccCCCcccCCCCccccc------cceehH----HHHH
Confidence 333 33456666678877 34444 34455566777799999999999999976554 677776 4579
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC--cchhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 004779 650 MVSLMILNMAALLCGFIRIIAVGN--WDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRIS 708 (731)
Q Consensus 650 ~~~l~~l~l~al~~g~~r~~~~~~--~~~~~~~~~~~~w~l~~l~p~~~al~~r~~k~~~p 708 (731)
+++++++|++|+++|++++..+.. ...+..+++|++++++++...+.+.+.++..++-|
T Consensus 626 ~~~L~~L~l~gl~~g~~r~~~~~~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~~~r~~~ 686 (852)
T PRK11498 626 YIFLVLLNLVGVAVGIWRYFYGPPNEILTVIVSLVWVFYNLIILGGAVAVSVESKQVRRSH 686 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccchhhhhhHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 999999999999999999875332 24556788899999888888888888877766544
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=5.6e-74 Score=677.94 Aligned_cols=508 Identities=25% Similarity=0.329 Sum_probs=412.0
Q ss_pred HHHHHHHHHH-HHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhheeccccCCCCCCCCCCCCCceE
Q 004779 20 NRLHALLHCI-AIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAID 98 (731)
Q Consensus 20 ~r~~~~~~~~-~~~~yl~wR~~~~l~~~~~~~~~~w~~l~~aE~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~Vd 98 (731)
-|++.++..+ +.+.|++||++.|+|..+.....++++++++|+++.+..+++.+..++|.+|.+.+.+ .+++.+|+||
T Consensus 56 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~P~Vs 134 (713)
T TIGR03030 56 PRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPLP-LDPEEWPTVD 134 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCC-CCcccCCeeE
Confidence 3555555544 4678999999999997666677888999999999998888888888888877643322 1256789999
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (731)
|+||+ |||+++++++|+.+++++|||+|+++|+|+|||++|.|....-++++
T Consensus 135 ViIP~---yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~------------------------- 186 (713)
T TIGR03030 135 VFIPT---YNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQA------------------------- 186 (713)
T ss_pred EEEcC---CCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhh-------------------------
Confidence 99999 99999999999999999999999999999999999987543211110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccC
Q 004779 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (731)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 258 (731)
+..+.+.++++..++ .++.|++|++
T Consensus 187 ----------~~~~~~~~~~~l~~~---------------------------------------------~~v~yi~r~~ 211 (713)
T TIGR03030 187 ----------EAAQRREELKEFCRK---------------------------------------------LGVNYITRPR 211 (713)
T ss_pred ----------hhhhhHHHHHHHHHH---------------------------------------------cCcEEEECCC
Confidence 000111222222211 1488999987
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc-CCCCCCcEEEEccCceeccCCC---C-
Q 004779 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINK---Y- 333 (731)
Q Consensus 259 ~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~---~- 333 (731)
+ +|+||||||+|+++ ++||+|+++|||+++. ||+|++++++|. || ++|+||+||.|+|.+. +
T Consensus 212 n----~~~KAgnLN~al~~----a~gd~Il~lDAD~v~~-pd~L~~~v~~f~~dp----~v~~Vqtp~~f~~p~~~~~nl 278 (713)
T TIGR03030 212 N----VHAKAGNINNALKH----TDGELILIFDADHVPT-RDFLQRTVGWFVEDP----KLFLVQTPHFFVSPDPIERNL 278 (713)
T ss_pred C----CCCChHHHHHHHHh----cCCCEEEEECCCCCcC-hhHHHHHHHHHHhCC----CEEEEeCCeeccCCCHHhhhh
Confidence 5 68999999999999 8999999999999997 999999999995 65 5999999999988532 1
Q ss_pred ---chHHHHHHHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchh
Q 004779 334 ---DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSN 410 (731)
Q Consensus 334 ---d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 410 (731)
+.+.++.+.||..++.|.|.++++++||+|+++||+++++
T Consensus 279 ~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~------------------------------------- 321 (713)
T TIGR03030 279 GTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDE------------------------------------- 321 (713)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHH-------------------------------------
Confidence 2334567789999999999999999999999999999963
Q ss_pred hHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhcccc
Q 004779 411 VLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 490 (731)
Q Consensus 411 ~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~ 490 (731)
.+||++++++||++++++||++||+++|+++ +.+.|++|+|++++++||.||++|+
T Consensus 322 ----------------------iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~--~~~~g~~p~sl~~~~~Qr~RWa~G~ 377 (713)
T TIGR03030 322 ----------------------IGGIAGETVTEDAETALKLHRRGWNSAYLDR--PLIAGLAPETLSGHIGQRIRWAQGM 377 (713)
T ss_pred ----------------------cCCCCCCCcCcHHHHHHHHHHcCCeEEEecc--ccccccCCCCHHHHHHHHHHHhcCh
Confidence 5689999999999999999999999999986 8899999999999999999999999
Q ss_pred ccccccccCCcccCCCCCCHhHHHHhHhHhHhhHHhHHHHHHHHHHHHHHHHcCCccccccCchhHHHHHHHHHHHHHHH
Q 004779 491 TDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKH 570 (731)
Q Consensus 491 ~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~l~P~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~~~~ 570 (731)
+|+++. .||++. +++++.||++|+++++|+ +.+++.++|+++|++++++|++++++. +..+++ .++|+++.+
T Consensus 378 ~qi~~~-~~pl~~--~gl~~~qrl~y~~~~~~~-~~~~~~~~~~~~P~~~l~~~~~~~~~~---~~~~~~-~~lp~~~~~ 449 (713)
T TIGR03030 378 MQIFRL-DNPLLK--RGLSFPQRLCYLNAMLFW-FFPLPRVIFLTAPLAYLFFGLNIFVAS---ALEILA-YALPHMLHS 449 (713)
T ss_pred HHHHhh-hCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCcceeCC---HHHHHH-HHHHHHHHH
Confidence 999974 589875 799999999999999998 899999999999999999999998752 222222 346766666
Q ss_pred HHHHH-HhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhhHH
Q 004779 571 LQEVI-STGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVP 649 (731)
Q Consensus 571 ll~~~-~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l~~P 649 (731)
++.+. ..|.....||++ ++.+ ...++.+..++.+++++++.+|+||||++..++ +. .++++.|
T Consensus 450 ~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~------~~-----~~~~~~p 513 (713)
T TIGR03030 450 LLTNSYLFGRVRWPFWSE----VYET-VLAVYLLPPVLVTLLNPKKPKFNVTPKGELLDE------DY-----FSPLSRP 513 (713)
T ss_pred HHHHHHHcCCeecchHHH----HHHH-HHHHHHHHHHHHHHhCcCCCCceecCCCccccc------cc-----cchHHHH
Confidence 66543 356667789987 3433 355677788888899999999999999986543 11 2378999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC-cchhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCch
Q 004779 650 MVSLMILNMAALLCGFIRIIAVGN-WDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISP 709 (731)
Q Consensus 650 ~~~l~~l~l~al~~g~~r~~~~~~-~~~~~~~~~~~~w~l~~l~p~~~al~~r~~k~~~p~ 709 (731)
+++++++|++|+++|++++...+. ......+++|++++++.+...+.+...|+++++-|.
T Consensus 514 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR~~~R 574 (713)
T TIGR03030 514 YLILFALILAGLAFGLYRIYGYPIERGVLLVVLGWNLLNLILLGAALAVVAERRQRRSSPR 574 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCCCccc
Confidence 999999999999999999874332 345678999999999999999999999988887554
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=1.8e-39 Score=378.84 Aligned_cols=361 Identities=17% Similarity=0.125 Sum_probs=251.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCc--hhHH---HHHHHHHHHHHHHHHHHHHHHHhheeccccCCC---CC--C
Q 004779 19 INRLHALLHCIAIGFLIYYRASYLLQETRA--IPII---LWLLVFASELLLSFIWLLGRAYLWRPVSRTVFP---ER--L 88 (731)
Q Consensus 19 ~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~--~~~~---~w~~l~~aE~~~~~~~~l~~~~~~~p~~r~~~~---~~--l 88 (731)
+.|++.++..++.+.|..|+...+++..+. .... +-.+++..+.+.+...+++.+...+ .|+..+ +. -
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~~~~~~~~~~ 117 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKYSISASAAGD 117 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcccCCcccccC
Confidence 678888888888999999999999876431 1111 1223334455544444445443322 111110 10 0
Q ss_pred CCCCCCCceEEEEecCCCCCCchHH----HHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhh
Q 004779 89 PEDDKLPAIDVFICTADPEKEPAIG----VMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRR 164 (731)
Q Consensus 89 ~~~~~~P~VdV~I~t~~pynEp~~~----v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~ 164 (731)
+.....|+|+|+||+ |||+++. ++.+++|+.+++||. +++++|+|||++|.|...
T Consensus 118 ~~~~~~~~VaVliP~---yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~----------------- 176 (691)
T PRK05454 118 PPPPPEARTAILMPI---YNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAA----------------- 176 (691)
T ss_pred CCCCCCCceEEEEeC---CCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHH-----------------
Confidence 113457999999999 9999875 455566666799984 699999999999854210
Q ss_pred cCcccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhcc
Q 004779 165 YGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQAD 244 (731)
Q Consensus 165 ~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~ 244 (731)
|.+ .+++++.+.
T Consensus 177 ----------------------------e~~----~~~~L~~~~------------------------------------ 188 (691)
T PRK05454 177 ----------------------------EEA----AWLELRAEL------------------------------------ 188 (691)
T ss_pred ----------------------------HHH----HHHHHHHhc------------------------------------
Confidence 111 122221111
Q ss_pred ccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc-CCCCCCcEEEEcc
Q 004779 245 LVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQF 323 (731)
Q Consensus 245 ~~~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~-D~~~~~~vg~VQ~ 323 (731)
..-+++.|.+|++| .++||||+|++++.++ .++|||+++|||++++ ||++++++.+|. || ++|.||+
T Consensus 189 -~~~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m~-~d~L~~lv~~m~~dP----~vGlVQt 256 (691)
T PRK05454 189 -GGEGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLMS-GDTLVRLVRLMEANP----RAGLIQT 256 (691)
T ss_pred -CCCCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCCC-HHHHHHHHHHHhhCc----CEEEEeC
Confidence 00135889888775 6789999999999976 6789999999999998 999999999886 66 5999999
Q ss_pred CceeccCCCCchHHHHH----HHHHHHHHHhhhhcC--CccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhh
Q 004779 324 PQKFHNINKYDIYDGRF----RSAYCVQWQGMDGLK--GPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQS 397 (731)
Q Consensus 324 Pq~f~n~~~~d~~~~~~----~~f~~~i~~g~dg~~--~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~ 397 (731)
++.+.|.+ ..++.-+ .++......|.+.|+ ...|+|+|+++||+|+.+.
T Consensus 257 ~~~~~n~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~----------------------- 311 (691)
T PRK05454 257 LPVAVGAD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEH----------------------- 311 (691)
T ss_pred CccCcCCC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHh-----------------------
Confidence 99998752 3444322 233345677888776 3578999999999999640
Q ss_pred hcccCCCCCCchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChH
Q 004779 398 YKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLN 477 (731)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~ 477 (731)
|... .....+||..++++||++++.+|+++|||++|+++ .+.+++++|+|+.
T Consensus 312 ------------------------~glp---~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd-~~~~~ee~P~tl~ 363 (691)
T PRK05454 312 ------------------------CGLP---PLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPD-LPGSYEELPPNLL 363 (691)
T ss_pred ------------------------cCCc---cccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCc-cccccccCCCCHH
Confidence 0000 00013578889999999999999999999999984 2568999999999
Q ss_pred HHhhhhhhhccccccccccccCCcccCCCCCCHhHHHHhHhHhHhhHHhHHHHHHHHHHHHHHH
Q 004779 478 DLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCL 541 (731)
Q Consensus 478 ~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~l~P~~~l 541 (731)
++++||.||++|++|++.. ++. +++++.+|++|+...+.++..+++.++.++.|++.+
T Consensus 364 ~~~~qr~RW~~G~lQ~l~~----l~~--~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~~~ 421 (691)
T PRK05454 364 DELKRDRRWCQGNLQHLRL----LLA--KGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGTALAL 421 (691)
T ss_pred HHHHHHHHHHhchHHHHHH----HHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998752 232 689999999988765555233444444444444443
No 14
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=4.2e-36 Score=338.63 Aligned_cols=230 Identities=19% Similarity=0.170 Sum_probs=187.6
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccC
Q 004779 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (731)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (731)
.+..|.|+|+||+ |||+ ..+.+|+.++++++||+ ++|+|+|||++|.|.+.+.|..+
T Consensus 71 ~~~~p~vsViIP~---yNE~-~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~~~~~~~~~----------------- 127 (444)
T PRK14583 71 LKGHPLVSILVPC---FNEG-LNARETIHAALAQTYTN--IEVIAINDGSSDDTAQVLDALLA----------------- 127 (444)
T ss_pred cCCCCcEEEEEEe---CCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCCccHHHHHHHHHH-----------------
Confidence 3457999999999 9999 67899999999999995 99999999999977643322110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCc
Q 004779 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (731)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~ 250 (731)
..|+
T Consensus 128 ----------------------------------------------------------------------------~~~~ 131 (444)
T PRK14583 128 ----------------------------------------------------------------------------EDPR 131 (444)
T ss_pred ----------------------------------------------------------------------------hCCC
Confidence 0134
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc-CCCCCCcEEEEccCceecc
Q 004779 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHN 329 (731)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n 329 (731)
+.++.+++ +++||+|+|.|++. +++|+++++|||++++ ||++++++..|. || ++|.||+.....|
T Consensus 132 v~vv~~~~-----n~Gka~AlN~gl~~----a~~d~iv~lDAD~~~~-~d~L~~lv~~~~~~~----~~g~v~g~~~~~~ 197 (444)
T PRK14583 132 LRVIHLAH-----NQGKAIALRMGAAA----ARSEYLVCIDGDALLD-KNAVPYLVAPLIANP----RTGAVTGNPRIRT 197 (444)
T ss_pred EEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCcC-HHHHHHHHHHHHhCC----CeEEEEccceecC
Confidence 66665544 36799999999999 8999999999999987 999999998775 44 6999999887765
Q ss_pred CCCCchHHH----HHHHHHHHHHHhhhhcCCccc-cceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCC
Q 004779 330 INKYDIYDG----RFRSAYCVQWQGMDGLKGPVL-SGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 404 (731)
Q Consensus 330 ~~~~d~~~~----~~~~f~~~i~~g~dg~~~~~~-~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 404 (731)
. +..++. +...+++.+.++.+.++..++ +|+++.+||+++.+
T Consensus 198 ~--~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~~------------------------------- 244 (444)
T PRK14583 198 R--STLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALAD------------------------------- 244 (444)
T ss_pred C--CcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHHH-------------------------------
Confidence 3 223322 334455666677776766654 79999999999962
Q ss_pred CCCchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhh
Q 004779 405 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGT 484 (731)
Q Consensus 405 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~ 484 (731)
.+||+.++++||+++++|++++||++.|+++ +.+++++|+|++++++||.
T Consensus 245 ----------------------------vGg~~~~~i~ED~dl~~rl~~~G~~i~~~p~--a~~~~~~p~t~~~~~~Qr~ 294 (444)
T PRK14583 245 ----------------------------VGYWSPDMITEDIDISWKLQLKHWSVFFEPR--GLCWILMPETLRGLWKQRL 294 (444)
T ss_pred ----------------------------cCCCCCCcccccHHHHHHHHHcCCeEEEeec--cEEeeeCCCCHHHHHHHHH
Confidence 4679999999999999999999999999985 8999999999999999999
Q ss_pred hhcccccccccc
Q 004779 485 RWGSGLTDVGLS 496 (731)
Q Consensus 485 RWa~G~~qi~~~ 496 (731)
||++|.+|+++.
T Consensus 295 RW~~G~~~~~~~ 306 (444)
T PRK14583 295 RWAQGGAEVFLK 306 (444)
T ss_pred HHhCcHHHHHHH
Confidence 999999999975
No 15
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=1.8e-37 Score=324.96 Aligned_cols=241 Identities=16% Similarity=0.197 Sum_probs=185.4
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHc----CCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCc
Q 004779 97 IDVFICTADPEKEPAIGVMNTVLSAMA----LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (731)
Q Consensus 97 VdV~I~t~~pynEp~~~v~~Tv~s~l~----~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (731)
|+|+||+ |||+++++.+|+.+.+. +||+. +++|+|+|||+++...
T Consensus 1 ~SIliP~---~ne~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~--------------------------- 49 (254)
T cd04191 1 TAIVMPV---YNEDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIW--------------------------- 49 (254)
T ss_pred CEEEEeC---CCCCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHH---------------------------
Confidence 6899999 99999999999999875 56622 4999999999987210
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEE
Q 004779 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (731)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~ 252 (731)
..|+..+.++.+++ ...++++
T Consensus 50 ------------------~~~~~~~~~l~~~~-----------------------------------------~~~~~v~ 70 (254)
T cd04191 50 ------------------LAEEAAWLDLCEEL-----------------------------------------GAQGRIY 70 (254)
T ss_pred ------------------HHHHHHHHHHHHHh-----------------------------------------CCCCcEE
Confidence 01111111111111 0134799
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc-CCCCCCcEEEEccCceeccCC
Q 004779 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNIN 331 (731)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~ 331 (731)
|++|+++ .|.||||||+++...+ +++|+|+++|||+.+. |++|++++.+|. || ++|.||+|+.+.|.+
T Consensus 71 ~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~~-p~~l~~~v~~~~~~~----~vg~vq~~~~~~n~~ 139 (254)
T cd04191 71 YRRRREN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSLMS-GDTIVRLVRRMEANP----RAGIIQTAPKLIGAE 139 (254)
T ss_pred EEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCCCC-HHHHHHHHHHHHhCC----CEEEEeCCceeECCC
Confidence 9999886 6789999999998744 6789999999999998 999999999986 76 599999999999863
Q ss_pred CCchHHH----HHHHHHHHHHHhhhhcCC--ccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCC
Q 004779 332 KYDIYDG----RFRSAYCVQWQGMDGLKG--PVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANG 405 (731)
Q Consensus 332 ~~d~~~~----~~~~f~~~i~~g~dg~~~--~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 405 (731)
..+.+ +...|...++.|++.|++ .+|+|+++++||+||+..
T Consensus 140 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~------------------------------- 186 (254)
T cd04191 140 --TLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEH------------------------------- 186 (254)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHh-------------------------------
Confidence 22332 234455677888887654 578999999999999630
Q ss_pred CCchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCe-eEeccCCChHHHhhhhh
Q 004779 406 ENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ-FLGTSTTNLNDLLIQGT 484 (731)
Q Consensus 406 ~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~-~~g~aP~~l~~~~~Qr~ 484 (731)
|.. ...|..+||.+++++||+++|++++++|||++|.++ +. +++++|+|++++++||.
T Consensus 187 ----------------~~~---~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~--~~~~~~~~p~~~~~~~~qr~ 245 (254)
T cd04191 187 ----------------CAL---PVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPD--LEGSYEECPPTLIDFLKRDR 245 (254)
T ss_pred ----------------cCC---ccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccC--CcceEeECCCCHHHHHHHHH
Confidence 000 011224578889999999999999999999999985 54 68999999999999999
Q ss_pred hhcccccc
Q 004779 485 RWGSGLTD 492 (731)
Q Consensus 485 RWa~G~~q 492 (731)
||++|++|
T Consensus 246 RW~~G~~q 253 (254)
T cd04191 246 RWCQGNLQ 253 (254)
T ss_pred HHHhhcCc
Confidence 99999998
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=8e-36 Score=333.57 Aligned_cols=233 Identities=26% Similarity=0.303 Sum_probs=183.9
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcc
Q 004779 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (731)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~ 173 (731)
.|.|||+||+ |||+++++++|+.+++++|||. ++|+|+|||++|.|.+.+. +++.+
T Consensus 53 ~p~vsviiP~---ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~--------------~~~~~----- 108 (439)
T COG1215 53 LPKVSVIIPA---YNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILE--------------ELGAE----- 108 (439)
T ss_pred CCceEEEEec---CCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHH--------------HHHhh-----
Confidence 5999999999 9999889999999999999998 9999999999996654222 22110
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEE
Q 004779 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (731)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~y 253 (731)
+ + |.++.
T Consensus 109 ---------------------------~----------------------~------------------------~~~~~ 115 (439)
T COG1215 109 ---------------------------Y----------------------G------------------------PNFRV 115 (439)
T ss_pred ---------------------------c----------------------C------------------------cceEE
Confidence 0 0 12222
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCC
Q 004779 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKY 333 (731)
Q Consensus 254 v~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~ 333 (731)
+..++ .+++|+||+|.++.. +++|+|+++|||++++ ||+|++++..|.|+. .+|.+|+|+.+.+.+..
T Consensus 116 ~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~~-~d~l~~~~~~f~~~~---~~~v~~~~~~~~~~~~~ 183 (439)
T COG1215 116 IYPEK----KNGGKAGALNNGLKR----AKGDVVVILDADTVPE-PDALRELVSPFEDPP---VGAVVGTPRIRNRPDPS 183 (439)
T ss_pred Eeccc----cCccchHHHHHHHhh----cCCCEEEEEcCCCCCC-hhHHHHHHhhhcCCC---eeEEeCCceeeecCChh
Confidence 21112 268999999999999 8899999999999998 999999999999875 34799999988764221
Q ss_pred chHHHHHHHHHH-----HHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCc
Q 004779 334 DIYDGRFRSAYC-----VQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (731)
Q Consensus 334 d~~~~~~~~f~~-----~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 408 (731)
...+......|. ....+.++....+++|++.++||++|.+
T Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~----------------------------------- 228 (439)
T COG1215 184 NLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALEE----------------------------------- 228 (439)
T ss_pred hhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHH-----------------------------------
Confidence 222222222222 2222333334668899999999999963
Q ss_pred hhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhcc
Q 004779 409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 488 (731)
Q Consensus 409 ~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~ 488 (731)
.+||..+++|||.++++++|.+|||+.|+++ +.+++++|+|+.++++||.||++
T Consensus 229 ------------------------~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~ 282 (439)
T COG1215 229 ------------------------VGGWLEDTITEDADLTLRLHLRGYRVVYVPE--AIVWTEAPETLKELWRQRLRWAR 282 (439)
T ss_pred ------------------------hCCCCCCceeccHHHHHHHHHCCCeEEEeec--ceEeeeCcccHHHHHHHHHHHHc
Confidence 4579999999999999999999999999986 89999999999999999999999
Q ss_pred cccccccc
Q 004779 489 GLTDVGLS 496 (731)
Q Consensus 489 G~~qi~~~ 496 (731)
|.+|++..
T Consensus 283 g~~~~~~~ 290 (439)
T COG1215 283 GGLQVLLL 290 (439)
T ss_pred ccceeeeh
Confidence 99999974
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.1e-33 Score=316.17 Aligned_cols=230 Identities=21% Similarity=0.234 Sum_probs=184.7
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccC
Q 004779 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (731)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (731)
....|+|+|+||+ |||+ +.+++|+.|+++++||. .+|+|+|||++|.|.+.+.+.+
T Consensus 50 ~~~~p~vsViIp~---yne~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~~------------------ 105 (420)
T PRK11204 50 LKEYPGVSILVPC---YNEG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRLA------------------ 105 (420)
T ss_pred cCCCCCEEEEEec---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHHH------------------
Confidence 4567999999999 9998 88999999999999994 8999999999997653221110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCc
Q 004779 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (731)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~ 250 (731)
...|+
T Consensus 106 ---------------------------------------------------------------------------~~~~~ 110 (420)
T PRK11204 106 ---------------------------------------------------------------------------AQIPR 110 (420)
T ss_pred ---------------------------------------------------------------------------HhCCc
Confidence 01245
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc-CCCCCCcEEEEccCceecc
Q 004779 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHN 329 (731)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n 329 (731)
+.++.+++ +++||+|+|.|++. +++|+++++|||.+++ ||+|++++..|. || +++.||+.....|
T Consensus 111 v~~i~~~~-----n~Gka~aln~g~~~----a~~d~i~~lDaD~~~~-~d~L~~l~~~~~~~~----~v~~v~g~~~~~~ 176 (420)
T PRK11204 111 LRVIHLAE-----NQGKANALNTGAAA----ARSEYLVCIDGDALLD-PDAAAYMVEHFLHNP----RVGAVTGNPRIRN 176 (420)
T ss_pred EEEEEcCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-hhHHHHHHHHHHhCC----CeEEEECCceecc
Confidence 77877555 36799999999999 8999999999999997 999999999884 55 5999999887765
Q ss_pred CCCCchHHHHH----HHHHHHHHHhhhhcCCcc-ccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCC
Q 004779 330 INKYDIYDGRF----RSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 404 (731)
Q Consensus 330 ~~~~d~~~~~~----~~f~~~i~~g~dg~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 404 (731)
. +...+..+ ...+.....+....+... .+|+++++||+++.+
T Consensus 177 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~------------------------------- 223 (420)
T PRK11204 177 R--STLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALHE------------------------------- 223 (420)
T ss_pred c--hhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHHH-------------------------------
Confidence 3 22333222 222333344444444443 378999999999962
Q ss_pred CCCchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhh
Q 004779 405 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGT 484 (731)
Q Consensus 405 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~ 484 (731)
.+||+++.++||+++++|++++||++.|+++ +.++++.|+|++++++||.
T Consensus 224 ----------------------------vgg~~~~~~~ED~~l~~rl~~~G~~i~~~p~--~~~~~~~p~t~~~~~~Qr~ 273 (420)
T PRK11204 224 ----------------------------VGYWSTDMITEDIDISWKLQLRGWDIRYEPR--ALCWILMPETLKGLWKQRL 273 (420)
T ss_pred ----------------------------hCCCCCCcccchHHHHHHHHHcCCeEEeccc--cEEEeECcccHHHHHHHHH
Confidence 4689999999999999999999999999986 8999999999999999999
Q ss_pred hhcccccccccc
Q 004779 485 RWGSGLTDVGLS 496 (731)
Q Consensus 485 RWa~G~~qi~~~ 496 (731)
||++|++|.++.
T Consensus 274 RW~~G~~~~l~~ 285 (420)
T PRK11204 274 RWAQGGAEVLLK 285 (420)
T ss_pred HHhcCHHHHHHH
Confidence 999999999974
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=9e-34 Score=319.27 Aligned_cols=282 Identities=17% Similarity=0.163 Sum_probs=203.1
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccC
Q 004779 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (731)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (731)
.+..|+|+|+||+ |||+ +.+.+||.++.+++||.++++|+|+|||++|.|.+.+.|+.+
T Consensus 45 ~~~~P~vsVIIP~---yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~----------------- 103 (439)
T TIGR03111 45 IGKLPDITIIIPV---YNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQN----------------- 103 (439)
T ss_pred cCCCCCEEEEEEe---CCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 3568999999999 9999 899999999999999999999999999999977653332210
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCc
Q 004779 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (731)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~ 250 (731)
..|+
T Consensus 104 ----------------------------------------------------------------------------~~~~ 107 (439)
T TIGR03111 104 ----------------------------------------------------------------------------EFPG 107 (439)
T ss_pred ----------------------------------------------------------------------------hCCC
Confidence 0122
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc-CCCCCCcEEEEccCceecc
Q 004779 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHN 329 (731)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n 329 (731)
+..+.-++ ++|||+|+|+|++. ++||+|+++|||+++. ||++++++..|. || +++.|++.+.-..
T Consensus 108 v~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~~-~d~L~~l~~~f~~~~----~v~~v~g~~~~~~ 173 (439)
T TIGR03111 108 LSLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSDGKLH-KDAIKNMVTRFENNP----DIHAMTGVILTDK 173 (439)
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCCCCcC-hHHHHHHHHHHHhCC----CeEEEEeEEecCc
Confidence 32222222 47899999999999 8999999999999986 999999999886 55 4777765442211
Q ss_pred C--CC-Cc---hHHHHHHHHHHHH---H--Hhh-hhcCCcc-ccceeEEEeccccccccchhhhhhhcCCchhhhhhhhh
Q 004779 330 I--NK-YD---IYDGRFRSAYCVQ---W--QGM-DGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQ 396 (731)
Q Consensus 330 ~--~~-~d---~~~~~~~~f~~~i---~--~g~-dg~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~ 396 (731)
. +. .. .+..+.. +++.. . ++. ...+..+ ++|+++++||+++..
T Consensus 174 ~~~~~~~~~~~~~~~~~~-~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~----------------------- 229 (439)
T TIGR03111 174 ELIEKTKGRFLKLIRRCE-YFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILK----------------------- 229 (439)
T ss_pred hhhhhhcchhhhHhHHhH-HHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHH-----------------------
Confidence 0 00 00 1111111 12211 1 111 1223333 468888999999962
Q ss_pred hhcccCCCCCCchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHh-CCCEEEEeCCCCCeeEeccCCC
Q 004779 397 SYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHC-KGWTSTYLTPFRPQFLGTSTTN 475 (731)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~-~Gwrs~y~~~~~~~~~g~aP~~ 475 (731)
.+||+.++++||++++++++. .|+|+.|+++ +.++.++|+|
T Consensus 230 ------------------------------------vggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~~~~p~t 271 (439)
T TIGR03111 230 ------------------------------------TQLYNSETVGEDTDMTFQIRELLDGKVYLCEN--AIFYVDPIDG 271 (439)
T ss_pred ------------------------------------hCCCCCCCcCccHHHHHHHHHhcCCeEEECCC--CEEEEECCcC
Confidence 568999999999999999985 6999999986 8999999999
Q ss_pred hHHHhhhhhhhccccccccccccCCcccCCCCCCHhHHHHhHhHhHhhHHhHHHHHHHHHHHHHHHHcCCccc
Q 004779 476 LNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLY 548 (731)
Q Consensus 476 l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~l~P~~~l~~g~~~~ 548 (731)
++++++||.||++|.+|++....++... .+.++.+++.+....... ...+|.+++.++++++.++|.++.
T Consensus 272 ~~~~~~QR~RW~rG~~qv~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 272 LNKLYTQRQRWQRGELEVSHMFFESANK--SIKGFFSNFMVRRIMYDH-TFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHhhhhh--chhhhhhHHHHHHHHhhH-hhHHHHHHHHHHHHHHHHhccHHH
Confidence 9999999999999999999643333332 345566666554443334 557788888888988888876544
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=7.5e-31 Score=297.31 Aligned_cols=262 Identities=16% Similarity=0.120 Sum_probs=184.4
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCccc
Q 004779 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKT 169 (731)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l-~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~ 169 (731)
..+.|+|+|+||+ |||+ +++.+||.+++ ++|||+ ++|+|+||+++|.|.+.+.|.++
T Consensus 62 ~~~~p~vaIlIPA---~NE~-~vI~~~l~s~L~~ldY~~--~eIiVv~d~ndd~T~~~v~~l~~---------------- 119 (504)
T PRK14716 62 SVPEKRIAIFVPA---WREA-DVIGRMLEHNLATLDYEN--YRIFVGTYPNDPATLREVDRLAA---------------- 119 (504)
T ss_pred cCCCCceEEEEec---cCch-hHHHHHHHHHHHcCCCCC--eEEEEEECCCChhHHHHHHHHHH----------------
Confidence 3458999999999 9999 89999999864 789974 99999999999987654333210
Q ss_pred CCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCC
Q 004779 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP 249 (731)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P 249 (731)
++|
T Consensus 120 -----------------------------------------------------------------------------~~p 122 (504)
T PRK14716 120 -----------------------------------------------------------------------------RYP 122 (504)
T ss_pred -----------------------------------------------------------------------------HCC
Confidence 123
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcC--CCCCC---CEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccC
Q 004779 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSG--VISNS---PYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFP 324 (731)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~--~~t~g---~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~P 324 (731)
+++.+. .+++| .++||+|||.+++..- ....| |+|+++|||.++. |++|+.....+.| .++||.|
T Consensus 123 ~v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~-Pd~Lr~~~~~~~~------~~~VQ~p 192 (504)
T PRK14716 123 RVHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIH-PLELRLYNYLLPR------HDFVQLP 192 (504)
T ss_pred CeEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcC-ccHHHHHHhhcCC------CCEEecc
Confidence 343332 22333 3689999999997621 00234 9999999999997 9999876555432 5689999
Q ss_pred ceeccCCCCchHH----HHHHHHHHHHHHhhhhcCCcc-ccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhc
Q 004779 325 QKFHNINKYDIYD----GRFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYK 399 (731)
Q Consensus 325 q~f~n~~~~d~~~----~~~~~f~~~i~~g~dg~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 399 (731)
....+.+.+...+ .+....+...+..++.++++. ++|+|+++||++|+..
T Consensus 193 v~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l------------------------- 247 (504)
T PRK14716 193 VFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALERL------------------------- 247 (504)
T ss_pred eeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHH-------------------------
Confidence 8765532222212 111122233455678888765 6899999999999630
Q ss_pred ccCCCCCCchhhHHHhhcccccceeeccccccccc-cccCCCccchHHHHHHHHhCCCEEEEeCCCCC------------
Q 004779 400 QNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV-GILYQSVSEDLFTGFILHCKGWTSTYLTPFRP------------ 466 (731)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~-G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~------------ 466 (731)
.++ ..+ +|+++++|||+++|++++++|||++|++. +
T Consensus 248 -------------~~~----------------~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~--ai~~~~~~~~~~~ 296 (504)
T PRK14716 248 -------------AAE----------------RGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRV--RADDTTDRPDRRG 296 (504)
T ss_pred -------------Hhh----------------cCCCCCCCCCcchHHHHHHHHHHCCCEEEEecc--ccccccccccccc
Confidence 000 012 39999999999999999999999999985 4
Q ss_pred ---eeEeccCCChHHHhhhhhhhcccc-ccccccc-c-CCcccCCCCCCHhHHHHhHhH
Q 004779 467 ---QFLGTSTTNLNDLLIQGTRWGSGL-TDVGLSR-F-CPLLYGPSRMSLLQSMCYGEL 519 (731)
Q Consensus 467 ---~~~g~aP~~l~~~~~Qr~RWa~G~-~qi~~~~-~-~pl~~~~~~l~~~qrl~y~~~ 519 (731)
...+++|+|++++++||.||+.|. +|..... + .++. .+.+.+++|..-+..
T Consensus 297 ~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~--~~~~~~rdr~~~~~~ 353 (504)
T PRK14716 297 EPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA--TKYMLWRDRKGLLTN 353 (504)
T ss_pred ccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh--hhhhHHHHHHHHHHH
Confidence 245889999999999999999995 7876421 1 1111 244667888776654
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.97 E-value=1.3e-30 Score=267.45 Aligned_cols=227 Identities=24% Similarity=0.316 Sum_probs=176.8
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004779 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (731)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (731)
|+|+|+||+ |||+ +.+.++|.|+++++||.++++|+|+|| ++|.|.+.+.+..+
T Consensus 1 p~vSViIp~---yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~--------------------- 54 (232)
T cd06437 1 PMVTVQLPV---FNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE--------------------- 54 (232)
T ss_pred CceEEEEec---CCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH---------------------
Confidence 689999999 9998 889999999999999998999999998 88877754433210
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEE
Q 004779 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (731)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv 254 (731)
.+.+ ..++++++
T Consensus 55 -------------------------~~~~-------------------------------------------~~~~i~~~ 66 (232)
T cd06437 55 -------------------------EYAA-------------------------------------------QGVNIKHV 66 (232)
T ss_pred -------------------------HHhh-------------------------------------------cCCceEEE
Confidence 0000 01246777
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCc
Q 004779 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (731)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 334 (731)
.+.++ .++|++|+|.|++. ++||+|+++|+|++++ |++|++++.++.|| ++|+||++..+.|.+.+
T Consensus 67 ~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~~-~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~~~- 132 (232)
T cd06437 67 RRADR----TGYKAGALAEGMKV----AKGEYVAIFDADFVPP-PDFLQKTPPYFADP----KLGFVQTRWGHINANYS- 132 (232)
T ss_pred ECCCC----CCCchHHHHHHHHh----CCCCEEEEEcCCCCCC-hHHHHHhhhhhcCC----CeEEEecceeeEcCCCc-
Confidence 76554 46799999999999 8999999999999997 99999988877766 59999998766554221
Q ss_pred hHHH----HHHHHHHHHHHhhhhcCCc-cccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCch
Q 004779 335 IYDG----RFRSAYCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 409 (731)
Q Consensus 335 ~~~~----~~~~f~~~i~~g~dg~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 409 (731)
.+.. ....++...+.+....+.. .++|+++++||+++..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~------------------------------------ 176 (232)
T cd06437 133 LLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIED------------------------------------ 176 (232)
T ss_pred hhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHHH------------------------------------
Confidence 1111 1112334444444444443 3589999999999852
Q ss_pred hhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhccc
Q 004779 410 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (731)
Q Consensus 410 ~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 489 (731)
.+||+..+..||+++++|++.+||++.|+++ +.+++..|+|+.++++||+||++|
T Consensus 177 -----------------------vgg~~~~~~~ED~~l~~rl~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~rW~~g 231 (232)
T cd06437 177 -----------------------AGGWNHDTLTEDLDLSYRAQLKGWKFVYLDD--VVVPAELPASMSAYRSQQHRWSKG 231 (232)
T ss_pred -----------------------hCCCCCCcchhhHHHHHHHHHCCCeEEEecc--ceeeeeCCcCHHHHHHHHHHhccC
Confidence 4579888899999999999999999999985 899999999999999999999999
Q ss_pred c
Q 004779 490 L 490 (731)
Q Consensus 490 ~ 490 (731)
.
T Consensus 232 ~ 232 (232)
T cd06437 232 P 232 (232)
T ss_pred C
Confidence 4
No 21
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.97 E-value=2.7e-30 Score=263.34 Aligned_cols=230 Identities=34% Similarity=0.484 Sum_probs=187.3
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004779 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (731)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (731)
|+|+|+||+ |||+++.+++++.|+++++||.++++|+|+|||++|.|.+.+.+
T Consensus 1 p~vsviip~---~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~------------------------ 53 (234)
T cd06421 1 PTVDVFIPT---YNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAE------------------------ 53 (234)
T ss_pred CceEEEEec---CCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHH------------------------
Confidence 789999999 99987899999999999999999999999999999865431111
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEE
Q 004779 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (731)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv 254 (731)
+..+ .++.++
T Consensus 54 -----------------------------~~~~-----------------------------------------~~~~~~ 63 (234)
T cd06421 54 -----------------------------LGVE-----------------------------------------YGYRYL 63 (234)
T ss_pred -----------------------------hhcc-----------------------------------------cCceEE
Confidence 0000 024566
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCc
Q 004779 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (731)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 334 (731)
.++++ .++|+||+|.|++. +++|+|+++|+|.+++ |++|.+++..+.+ +++++.|++++.+.+.+..+
T Consensus 64 ~~~~~----~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~---~~~~~~v~~~~~~~~~~~~~ 131 (234)
T cd06421 64 TRPDN----RHAKAGNLNNALAH----TTGDFVAILDADHVPT-PDFLRRTLGYFLD---DPKVALVQTPQFFYNPDPFD 131 (234)
T ss_pred EeCCC----CCCcHHHHHHHHHh----CCCCEEEEEccccCcC-ccHHHHHHHHHhc---CCCeEEEecceEEecCCcch
Confidence 55543 57899999999998 8999999999999997 9999999999875 23699999999887654321
Q ss_pred ----hHHHHHHHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchh
Q 004779 335 ----IYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSN 410 (731)
Q Consensus 335 ----~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 410 (731)
.+......++..+..+.+.++...++|++.++||+++..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~------------------------------------- 174 (234)
T cd06421 132 WLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALDE------------------------------------- 174 (234)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHHH-------------------------------------
Confidence 223334455566666666667778899999999999952
Q ss_pred hHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhcccc
Q 004779 411 VLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 490 (731)
Q Consensus 411 ~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~ 490 (731)
.+||+...+.||++++.+++++||+++|+++ +.+.+..|+++.++++||.||.+|+
T Consensus 175 ----------------------ig~~~~~~~~eD~~l~~r~~~~g~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~~~~ 230 (234)
T cd06421 175 ----------------------IGGFPTDSVTEDLATSLRLHAKGWRSVYVPE--PLAAGLAPETLAAYIKQRLRWARGM 230 (234)
T ss_pred ----------------------hCCCCccceeccHHHHHHHHHcCceEEEecC--ccccccCCccHHHHHHHHHHHhcCC
Confidence 4578878899999999999999999999986 8899999999999999999999999
Q ss_pred cccc
Q 004779 491 TDVG 494 (731)
Q Consensus 491 ~qi~ 494 (731)
+|++
T Consensus 231 ~~~~ 234 (234)
T cd06421 231 LQIL 234 (234)
T ss_pred eeeC
Confidence 9864
No 22
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.97 E-value=4e-28 Score=285.23 Aligned_cols=239 Identities=19% Similarity=0.197 Sum_probs=173.6
Q ss_pred CCCCCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcC
Q 004779 88 LPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYG 166 (731)
Q Consensus 88 l~~~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l-~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~ 166 (731)
++ +++.|+|+|+||+ |||+ .++.+|+.+++ ++|||+ ++|+|+||++++.|.+++.+.+ +
T Consensus 57 l~-~~~~~~vsIlVPa---~nE~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~l~----------~--- 116 (727)
T PRK11234 57 LY-KPDEKPLAIMVPA---WNET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDAVC----------A--- 116 (727)
T ss_pred cc-cCCCCCEEEEEec---Ccch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHHHH----------H---
Confidence 44 4567999999999 9999 99999999987 799997 9999999888776664332211 0
Q ss_pred cccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhcccc
Q 004779 167 IKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLV 246 (731)
Q Consensus 167 v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~ 246 (731)
T Consensus 117 -------------------------------------------------------------------------------- 116 (727)
T PRK11234 117 -------------------------------------------------------------------------------- 116 (727)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCC-----CCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEE
Q 004779 247 EMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVI-----SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV 321 (731)
Q Consensus 247 ~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~-----t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~V 321 (731)
++|++..+.-+ ++| .++||+|||+++...-.. ...+++++.|||.++. |++|+ .+.++.++ + ++|
T Consensus 117 ~~p~~~~v~~~-~~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~-pd~L~-~~~~l~~~----~-~~V 186 (727)
T PRK11234 117 RFPNVHKVVCA-RPG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVIS-PMELR-LFNYLVER----K-DLI 186 (727)
T ss_pred HCCCcEEEEeC-CCC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCC-hhHHH-HHHhhcCC----C-CeE
Confidence 11233322222 233 468999999999873100 2346788899999997 99997 67778764 3 899
Q ss_pred ccCceeccCCCCchHHH----HHHHHHHHHHHhhhhcCCc-cccceeEEEecc---ccccccchhhhhhhcCCchhhhhh
Q 004779 322 QFPQKFHNINKYDIYDG----RFRSAYCVQWQGMDGLKGP-VLSGTGYYIKRE---SLYADFTHTELKDTFGKSNVLINS 393 (731)
Q Consensus 322 Q~Pq~f~n~~~~d~~~~----~~~~f~~~i~~g~dg~~~~-~~~Gtg~~~RR~---aL~~~~~~~~~~~~~~~~~~~~~s 393 (731)
|.|....+.+.+...+. +....+...+++++.++++ .+.|+|+.|+|+ +|.+
T Consensus 187 Q~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~~-------------------- 246 (727)
T PRK11234 187 QIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLE-------------------- 246 (727)
T ss_pred eecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHHH--------------------
Confidence 99966333221222222 2223334567888998776 468999999444 4431
Q ss_pred hhhhhcccCCCCCCchhhHHHhhcccccceeeccccccccc---cccCCCccchHHHHHHHHhCCCEEEEeCC-------
Q 004779 394 LHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV---GILYQSVSEDLFTGFILHCKGWTSTYLTP------- 463 (731)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~---G~~~~svtED~~t~~rl~~~Gwrs~y~~~------- 463 (731)
.+ ||+.+++|||+++|++|+.+||+++|++.
T Consensus 247 ---------------------------------------~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~ 287 (727)
T PRK11234 247 ---------------------------------------DGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAK 287 (727)
T ss_pred ---------------------------------------hcCCCCcCCCcchHHHHHHHHHHHCCCEEEEcccccccccc
Confidence 23 59999999999999999999999999981
Q ss_pred --------------CCCeeEeccCCChHHHhhhhhhhccc-cccccc
Q 004779 464 --------------FRPQFLGTSTTNLNDLLIQGTRWGSG-LTDVGL 495 (731)
Q Consensus 464 --------------~~~~~~g~aP~~l~~~~~Qr~RWa~G-~~qi~~ 495 (731)
+...++++.|+|+++.++||.||.+| .+|.+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 288 EREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred cccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 01347888999999999999999999 587764
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.97 E-value=2.2e-29 Score=260.43 Aligned_cols=231 Identities=23% Similarity=0.271 Sum_probs=180.0
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004779 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (731)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (731)
|.|+|+||+ |||+ +.+.+|+.|+++++||.++++|+|+|||++|.|.+.+.+..
T Consensus 1 p~vsIiIp~---~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~---------------------- 54 (241)
T cd06427 1 PVYTILVPL---YKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALR---------------------- 54 (241)
T ss_pred CeEEEEEec---CCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhc----------------------
Confidence 789999999 9999 88999999999999998899999999999997654221100
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEE
Q 004779 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (731)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv 254 (731)
. ....+++++
T Consensus 55 ----------------------------~------------------------------------------~~~~~i~~~ 64 (241)
T cd06427 55 ----------------------------L------------------------------------------PSIFRVVVV 64 (241)
T ss_pred ----------------------------c------------------------------------------CCCeeEEEe
Confidence 0 000124444
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCc
Q 004779 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (731)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 334 (731)
...+ ..+|++|+|.|++. ++||+|+++|+|.+++ |+++.+++.+|.+ .++++++||++..+.|...+
T Consensus 65 ~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~~-~~~l~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~- 131 (241)
T cd06427 65 PPSQ-----PRTKPKACNYALAF----ARGEYVVIYDAEDAPD-PDQLKKAVAAFAR--LDDKLACVQAPLNYYNAREN- 131 (241)
T ss_pred cCCC-----CCchHHHHHHHHHh----cCCCEEEEEcCCCCCC-hHHHHHHHHHHHh--cCCCEEEEeCceEeeCCCcc-
Confidence 3322 36899999999999 8999999999999987 9999999998863 12479999998877764221
Q ss_pred hH----HHHHHHHHHHHHHhhhhcCCcc-ccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCch
Q 004779 335 IY----DGRFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 409 (731)
Q Consensus 335 ~~----~~~~~~f~~~i~~g~dg~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 409 (731)
.. ..+....++...++....+... ++|++.++||+++..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~------------------------------------ 175 (241)
T cd06427 132 WLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLRE------------------------------------ 175 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHHH------------------------------------
Confidence 11 1122233455556666555554 468888999999962
Q ss_pred hhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhccc
Q 004779 410 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (731)
Q Consensus 410 ~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 489 (731)
.+||+....+||++.++|++++|||+.+++ ...++..|+|++++++||.||+.|
T Consensus 176 -----------------------vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~---~~~~~~~~~~~~~~~~q~~Rw~~g 229 (241)
T cd06427 176 -----------------------LGGWDPFNVTEDADLGLRLARAGYRTGVLN---STTLEEANNALGNWIRQRSRWIKG 229 (241)
T ss_pred -----------------------cCCCCcccchhhHHHHHHHHHCCceEEEec---ccccccCcHhHHHHHHHHHHHhcc
Confidence 457887788999999999999999999996 346789999999999999999999
Q ss_pred ccccccc
Q 004779 490 LTDVGLS 496 (731)
Q Consensus 490 ~~qi~~~ 496 (731)
.+|++..
T Consensus 230 ~~~~~~~ 236 (241)
T cd06427 230 YMQTWLV 236 (241)
T ss_pred HHHHHHH
Confidence 9999863
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.96 E-value=2.6e-28 Score=250.17 Aligned_cols=230 Identities=23% Similarity=0.288 Sum_probs=173.9
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccccc
Q 004779 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (731)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (731)
+|+||+ |||+++.+.+++.++++++||. .+|+|+|||++|.|.....+. +|+++
T Consensus 1 siiip~---~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~---------~~~~~------------ 54 (236)
T cd06435 1 SIHVPC---YEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEA---------HCAQL------------ 54 (236)
T ss_pred CeeEee---CCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHH---------HHHHh------------
Confidence 589999 9999889999999999999996 899999999999764211110 00000
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEecc
Q 004779 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (731)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~ 257 (731)
-+++.++..+
T Consensus 55 ----------------------------------------------------------------------~~~i~~i~~~ 64 (236)
T cd06435 55 ----------------------------------------------------------------------GERFRFFHVE 64 (236)
T ss_pred ----------------------------------------------------------------------CCcEEEEEcC
Confidence 0135666555
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHH
Q 004779 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 337 (731)
Q Consensus 258 k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (731)
++ .++|+||+|.|++.+. .++|+|+++|+|..++ |++|.+++..|.++ +++.|++++.+.+. ...++.
T Consensus 65 ~~----~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~~~~~~~-~~~~~~ 132 (236)
T cd06435 65 PL----PGAKAGALNYALERTA--PDAEIIAVIDADYQVE-PDWLKRLVPIFDDP----RVGFVQAPQDYRDG-EESLFK 132 (236)
T ss_pred CC----CCCchHHHHHHHHhcC--CCCCEEEEEcCCCCcC-HHHHHHHHHHhcCC----CeeEEecCccccCC-CccHHH
Confidence 43 4679999999999842 3589999999999987 99999999998765 59999998766542 122332
Q ss_pred HHH----HHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHH
Q 004779 338 GRF----RSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 413 (731)
Q Consensus 338 ~~~----~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 413 (731)
... ..++..........+..++.|+++++||+++..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~---------------------------------------- 172 (236)
T cd06435 133 RMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALDD---------------------------------------- 172 (236)
T ss_pred HHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHHHH----------------------------------------
Confidence 111 111222222233334455688999999999862
Q ss_pred HhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhccccccc
Q 004779 414 EETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDV 493 (731)
Q Consensus 414 ~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qi 493 (731)
.+||+.....||+++++|++++|||..|+++ +..++..|+++.++.+||.||++|++|+
T Consensus 173 -------------------iGgf~~~~~~eD~dl~~r~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~q~~rw~~g~~~~ 231 (236)
T cd06435 173 -------------------VGGWDEWCITEDSELGLRMHEAGYIGVYVAQ--SYGHGLIPDTFEAFKKQRFRWAYGAVQI 231 (236)
T ss_pred -------------------hCCCCCccccchHHHHHHHHHCCcEEEEcch--hhccCcCcccHHHHHHHHHHHhcchhhh
Confidence 4578888889999999999999999999985 7889999999999999999999999999
Q ss_pred ccc
Q 004779 494 GLS 496 (731)
Q Consensus 494 ~~~ 496 (731)
+..
T Consensus 232 ~~~ 234 (236)
T cd06435 232 LKK 234 (236)
T ss_pred hhc
Confidence 863
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.95 E-value=4.7e-29 Score=254.13 Aligned_cols=224 Identities=26% Similarity=0.296 Sum_probs=144.7
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004779 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (731)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (731)
|+|+|+||+ |||+ +.+.++|.|+++++||. ++|+|+||++++.|.+.+.+..+ ++.
T Consensus 1 P~v~Vvip~---~~~~-~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~~~~----------~~~-------- 56 (228)
T PF13641_consen 1 PRVSVVIPA---YNED-DVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRALAA----------RYP-------- 56 (228)
T ss_dssp --EEEE--B---SS-H-HHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHHHHH----------TTG--------
T ss_pred CEEEEEEEe---cCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHHHHH----------HcC--------
Confidence 789999999 9999 68999999999999965 99999999999866543222110 000
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEE
Q 004779 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (731)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv 254 (731)
. -++.++
T Consensus 57 --------------------------------------------------~-----------------------~~v~vi 63 (228)
T PF13641_consen 57 --------------------------------------------------R-----------------------VRVRVI 63 (228)
T ss_dssp --------------------------------------------------G------------------------GEEEE
T ss_pred --------------------------------------------------C-----------------------CceEEe
Confidence 0 025777
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCc
Q 004779 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (731)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 334 (731)
.+++++| .++|++|+|.+++. +++|+|+++|+|.+++ |++|++++.+|.+| ++++||++..+++. ..
T Consensus 64 ~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~~-p~~l~~~~~~~~~~----~~~~v~~~~~~~~~--~~ 130 (228)
T PF13641_consen 64 RRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTVLD-PDWLERLLAAFADP----GVGAVGGPVFPDND--RN 130 (228)
T ss_dssp E----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBS----S--EEEEEEEETTC--CC
T ss_pred ecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcEEC-HHHHHHHHHHHHhC----CCCeEeeeEeecCC--CC
Confidence 6655432 24799999999999 8899999999999996 99999999999766 59999988866642 21
Q ss_pred hHHHHHHHHH----HHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchh
Q 004779 335 IYDGRFRSAY----CVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSN 410 (731)
Q Consensus 335 ~~~~~~~~f~----~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 410 (731)
.+..-...++ .....+....+..+++|+++++||+++..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~~------------------------------------- 173 (228)
T PF13641_consen 131 WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALEE------------------------------------- 173 (228)
T ss_dssp EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHHH-------------------------------------
T ss_pred HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHHH-------------------------------------
Confidence 1111111111 11123334445566789999999999962
Q ss_pred hHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhccc
Q 004779 411 VLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (731)
Q Consensus 411 ~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 489 (731)
.+||+.....||.++++++.++||++.|+++ +.++...|.+++++++||.||++|
T Consensus 174 ----------------------~g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 174 ----------------------VGGFDPFILGEDFDLCLRLRAAGWRIVYAPD--ALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp ----------------------H-S--SSSSSHHHHHHHHHHHTT--EEEEEE--EEEEE--SSSTHHHHHHHHHHH--
T ss_pred ----------------------hCCCCCCCcccHHHHHHHHHHCCCcEEEECC--cEEEEeCCCCHHHHHHHHhccCcC
Confidence 4578888889999999999999999999985 889999999999999999999987
No 26
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.95 E-value=2.6e-26 Score=253.59 Aligned_cols=228 Identities=15% Similarity=0.165 Sum_probs=168.1
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCC
Q 004779 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (731)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (731)
...|+|+|+||+ |||+ +.+.+++.|++++|||. +||+|+||+++|.|.+.+.+..
T Consensus 38 ~~~p~VSViiP~---~nee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~------------------- 92 (373)
T TIGR03472 38 RAWPPVSVLKPL---HGDE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLR------------------- 92 (373)
T ss_pred CCCCCeEEEEEC---CCCC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHH-------------------
Confidence 347999999999 9999 67899999999999997 9999999999987654221110
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcE
Q 004779 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (731)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l 251 (731)
+.| |. .++
T Consensus 93 ---------------------------~~~----------------------p~-----------------------~~i 100 (373)
T TIGR03472 93 ---------------------------ADF----------------------PD-----------------------ADI 100 (373)
T ss_pred ---------------------------HhC----------------------CC-----------------------Cce
Confidence 000 00 136
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCC
Q 004779 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN 331 (731)
Q Consensus 252 ~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~ 331 (731)
.++..++++| .++|++|+|++++. +++|+++++|||.+++ ||+|++++..|.|| +++.|+++....+
T Consensus 101 ~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~~-p~~L~~lv~~~~~~----~v~~V~~~~~~~~-- 167 (373)
T TIGR03472 101 DLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISVG-PDYLRQVVAPLADP----DVGLVTCLYRGRP-- 167 (373)
T ss_pred EEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCcC-hhHHHHHHHHhcCC----CcceEeccccCCC--
Confidence 6665544443 45799999999998 8999999999999997 99999999999877 4899998643222
Q ss_pred CCchHHHHHHH-----HHHHHHHhhhhcCC-ccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCC
Q 004779 332 KYDIYDGRFRS-----AYCVQWQGMDGLKG-PVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANG 405 (731)
Q Consensus 332 ~~d~~~~~~~~-----f~~~i~~g~dg~~~-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 405 (731)
.++....-... ++...... +..+. .++.|++.++||++++.
T Consensus 168 ~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~a~RR~~l~~-------------------------------- 214 (373)
T TIGR03472 168 VPGFWSRLGAMGINHNFLPSVMVA-RALGRARFCFGATMALRRATLEA-------------------------------- 214 (373)
T ss_pred CCCHHHHHHHHHhhhhhhHHHHHH-HhccCCccccChhhheeHHHHHH--------------------------------
Confidence 22222211111 11111111 12232 34678889999999963
Q ss_pred CCchhhHHHhhcccccceeeccccccccccccC--CCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhh
Q 004779 406 ENFSNVLQEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQG 483 (731)
Q Consensus 406 ~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr 483 (731)
.+||+. ++++||++++.++.++||++.|++. +......|+|++++++||
T Consensus 215 ---------------------------iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~--~v~~~~~~~s~~~~~~q~ 265 (373)
T TIGR03472 215 ---------------------------IGGLAALAHHLADDYWLGELVRALGLRVVLAPV--VVDTDVHETSFATLLAHE 265 (373)
T ss_pred ---------------------------cCChHHhcccchHHHHHHHHHHHcCCeEEecch--hhhcCCCccCHHHHHHHH
Confidence 457874 5789999999999999999999874 777888899999999999
Q ss_pred hhhccccc
Q 004779 484 TRWGSGLT 491 (731)
Q Consensus 484 ~RWa~G~~ 491 (731)
.||++...
T Consensus 266 ~RW~r~~~ 273 (373)
T TIGR03472 266 LRWSRTIR 273 (373)
T ss_pred HHHHhhhh
Confidence 99986554
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.94 E-value=6e-27 Score=243.58 Aligned_cols=172 Identities=17% Similarity=0.020 Sum_probs=116.2
Q ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHh-cCCCCCCcEEEEccCceeccCCCCchHHHHHHHHH---H
Q 004779 270 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAY---C 345 (731)
Q Consensus 270 aLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~---~ 345 (731)
++|.++.. +++|+|+++|||.+++ |++|++++.+| .|| ++|.|++.+...|.. ...+..-+..-| .
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~~-~~~l~~l~~~~~~~p----~vg~v~g~~~~~~~~-~~~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKFD-PDSIVQLYKAMDKDP----EIGGVCGEIHPMGKK-QGPLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcCC-HhHHHHHHHHHHhCC----CEEEEEeeeEEcCCc-chhHHHhHheehhhhh
Confidence 45666666 8999999999999997 99999999988 466 599999988776642 122222111111 1
Q ss_pred H-HHHhhhhcCCc-cccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhhcccccce
Q 004779 346 V-QWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCS 423 (731)
Q Consensus 346 ~-i~~g~dg~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ 423 (731)
. ...+....+.. ...|++++||+++|.+.+.. + . .+..+.
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~------~---~-----------------------------~~~~~~ 175 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGG------K---G-----------------------------PLLDYA 175 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcCCccc------c---c-----------------------------cchhhc
Confidence 1 11223334443 45799999999999751100 0 0 000001
Q ss_pred eeccccccccccccCCCccchHHHHHHHHhCCCEEEE--eCCCCCeeEeccCCChHHHhhhhhhhcccccc
Q 004779 424 YEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTY--LTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTD 492 (731)
Q Consensus 424 ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y--~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~q 492 (731)
|...+.- ...+....+++||.+++++|..+||++.| +++ +.+++++|+|++++++||.||++|++.
T Consensus 176 ~~~~~~~-~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~--a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 176 YLTNTVD-SLHKKNNLDLGEDRILCTLLLKAGPKRKYLYVPG--AVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred cccCccc-chHHHHHHhHhcccceeHHHhccCCccEEEEecc--cEEEEECCCCHHHHHHHhHhhhccccc
Confidence 1111100 01123445789999999999999999999 875 899999999999999999999999874
No 28
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.93 E-value=1.9e-25 Score=223.95 Aligned_cols=191 Identities=16% Similarity=0.189 Sum_probs=154.5
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004779 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (731)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (731)
|.|+|+||+ |||+ ..+.++|.|+++++||. ++|+|+|||++|.|.+.+.+..+ +
T Consensus 1 p~vsviip~---~n~~-~~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~~----------~---------- 54 (196)
T cd02520 1 PGVSILKPL---CGVD-PNLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLIA----------K---------- 54 (196)
T ss_pred CCeEEEEec---CCCC-ccHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHHH----------H----------
Confidence 789999999 9999 56899999999999997 99999999999976543222100 0
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCC--cEE
Q 004779 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP--LLV 252 (731)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P--~l~ 252 (731)
+| .+.
T Consensus 55 -------------------------------------------------------------------------~~~~~~~ 61 (196)
T cd02520 55 -------------------------------------------------------------------------YPNVDAR 61 (196)
T ss_pred -------------------------------------------------------------------------CCCCcEE
Confidence 01 134
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCC
Q 004779 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINK 332 (731)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~ 332 (731)
++..+++.| ..+|++|+|.|++. ++||+++++|+|..++ |++|.+++..+.+|+ ++.|++.
T Consensus 62 ~~~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~-------- 122 (196)
T cd02520 62 LLIGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDISVP-PDYLRRMVAPLMDPG----VGLVTCL-------- 122 (196)
T ss_pred EEecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCceEC-hhHHHHHHHHhhCCC----CCeEEee--------
Confidence 554443322 34699999999999 8999999999999987 999999999887664 7888754
Q ss_pred CchHHHHHHHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhH
Q 004779 333 YDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVL 412 (731)
Q Consensus 333 ~d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 412 (731)
+..|+++++||+++..
T Consensus 123 -------------------------~~~g~~~~~r~~~~~~--------------------------------------- 138 (196)
T cd02520 123 -------------------------CAFGKSMALRREVLDA--------------------------------------- 138 (196)
T ss_pred -------------------------cccCceeeeEHHHHHh---------------------------------------
Confidence 4578999999999852
Q ss_pred HHhhcccccceeeccccccccccccC--CCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhccc
Q 004779 413 QEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (731)
Q Consensus 413 ~~~~~~v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 489 (731)
.+||+. ..+.||++.++++.++||++.|+++ +.++...|.+++++++||.||++.
T Consensus 139 --------------------~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 139 --------------------IGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPY--VVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred --------------------ccChHHHhHHHHHHHHHHHHHHHcCCeEEEcch--heeccCCcccHHHHHHHHHHHhcc
Confidence 356754 3568999999999999999999985 889999999999999999999874
No 29
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.93 E-value=2.3e-23 Score=242.48 Aligned_cols=236 Identities=18% Similarity=0.186 Sum_probs=170.0
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCCeEEEE---EcCCCCccchhhHHHHHHhhhcchhhhhhcC
Q 004779 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYL---SDDGGSPITLHGMREACRFAKWWLPFCRRYG 166 (731)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l-~~dYP~~kl~v~v---~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~ 166 (731)
..+.|.|+|+||+ |||+ +++.+||.+++ ++|||+ ++|+| .|||.+ .+++.+.+
T Consensus 67 ~~~~~~vsIlVPa---~nE~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~T---~~~~~~~~-------------- 123 (703)
T PRK15489 67 ERDEQPLAIMVPA---WKEY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAET---ITEVERMR-------------- 123 (703)
T ss_pred ccCCCceEEEEeC---CCcH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCccH---HHHHHHHh--------------
Confidence 4567999999999 9999 99999999986 899995 89999 477643 32221110
Q ss_pred cccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhcccc
Q 004779 167 IKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLV 246 (731)
Q Consensus 167 v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~ 246 (731)
.
T Consensus 124 -------------------------------------------------------------------------------~ 124 (703)
T PRK15489 124 -------------------------------------------------------------------------------R 124 (703)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred CCCcEEEEeccCCCCCCCCChHHHHHHHHHhc--CC-CCCCCE--EEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEE
Q 004779 247 EMPLLVYVSREKRPEHLHHFKAGALNVLLRVS--GV-ISNSPY--ILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV 321 (731)
Q Consensus 247 ~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s--~~-~t~g~~--il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~V 321 (731)
.+|+++.|..++ +| ..+||.|||.++... .+ ...++| |+++|||.+++ |++|+.. .++.+. + .+|
T Consensus 125 ~~p~~~~v~~~~-~g--p~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~-P~~L~~~-~~~~~~---~--~~i 194 (703)
T PRK15489 125 RYKRLVRVEVPH-DG--PTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLH-PLELKYF-NYLLPR---K--DLV 194 (703)
T ss_pred cCCcEEEEEcCC-CC--CCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCC-hhHHHHH-HhhcCC---c--cee
Confidence 124455555433 22 468999999999862 00 113444 99999999987 9999754 666533 1 368
Q ss_pred ccCceeccCCCC----chHHHHHHHHHHHHHHhhhhcCCcc-ccceeEEEeccccccccchhhhhhhcCCchhhhhhhhh
Q 004779 322 QFPQKFHNINKY----DIYDGRFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQ 396 (731)
Q Consensus 322 Q~Pq~f~n~~~~----d~~~~~~~~f~~~i~~g~dg~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~ 396 (731)
|.|-.-...+.. ..|..+....++..+.++...++++ ..|+|+.|||++|..
T Consensus 195 Q~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~----------------------- 251 (703)
T PRK15489 195 QLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLA----------------------- 251 (703)
T ss_pred eeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHH-----------------------
Confidence 987421111112 2345566667788888999898876 489999999999852
Q ss_pred hhcccCCCCCCchhhHHHhhcccccceeeccccccccc---cccCCCccchHHHHHHHHhCCCEEEEeCC----------
Q 004779 397 SYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV---GILYQSVSEDLFTGFILHCKGWTSTYLTP---------- 463 (731)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~---G~~~~svtED~~t~~rl~~~Gwrs~y~~~---------- 463 (731)
++ +++ +|+.+|+|||+++|+||+++|||+.|+.-
T Consensus 252 ---------------l~------------------~~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~ 298 (703)
T PRK15489 252 ---------------LM------------------KERGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTS 298 (703)
T ss_pred ---------------HH------------------HhcCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccc
Confidence 01 123 58889999999999999999999999321
Q ss_pred -----------CCCeeEeccCCChHHHhhhhhhhccccc-ccc
Q 004779 464 -----------FRPQFLGTSTTNLNDLLIQGTRWGSGLT-DVG 494 (731)
Q Consensus 464 -----------~~~~~~g~aP~~l~~~~~Qr~RWa~G~~-qi~ 494 (731)
...+.++..|.++++.++||.||-.|-. |-.
T Consensus 299 ~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 299 WFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred cccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 1256678899999999999999999987 764
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.93 E-value=2.3e-24 Score=218.31 Aligned_cols=221 Identities=20% Similarity=0.217 Sum_probs=165.1
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (731)
|+||| |||+ +.+.+||.|++.++||.++++|+|+|||++|.|.+.+.+..
T Consensus 1 viip~---~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~-------------------------- 50 (229)
T cd04192 1 VVIAA---RNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAA-------------------------- 50 (229)
T ss_pred CEEEe---cCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHH--------------------------
Confidence 68999 9998 88999999999999999899999999999997654221000
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccC
Q 004779 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (731)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 258 (731)
....+++.++.++.
T Consensus 51 ------------------------------------------------------------------~~~~~~v~~~~~~~ 64 (229)
T cd04192 51 ------------------------------------------------------------------AKPNFQLKILNNSR 64 (229)
T ss_pred ------------------------------------------------------------------hCCCcceEEeeccC
Confidence 00112466665442
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHH
Q 004779 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG 338 (731)
Q Consensus 259 ~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~ 338 (731)
+ ...+|+.++|.+++. +++|+|+++|+|.++. |++|++++..+.++ ..+.|++++.+.. .+.+..
T Consensus 65 -~--~~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~~~~~~---~~~~~~ 129 (229)
T cd04192 65 -V--SISGKKNALTTAIKA----AKGDWIVTTDADCVVP-SNWLLTFVAFIQKE----QIGLVAGPVIYFK---GKSLLA 129 (229)
T ss_pred -c--ccchhHHHHHHHHHH----hcCCEEEEECCCcccC-HHHHHHHHHHhhcC----CCcEEeeeeeecC---CccHHH
Confidence 1 247899999999999 8899999999999997 99999999987654 3677888876652 222211
Q ss_pred HHHH----HHHHHHHhhhhcCCc-cccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHH
Q 004779 339 RFRS----AYCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 413 (731)
Q Consensus 339 ~~~~----f~~~i~~g~dg~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 413 (731)
.... .......+..+++.+ .++|++.++||+++..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~---------------------------------------- 169 (229)
T cd04192 130 KFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFE---------------------------------------- 169 (229)
T ss_pred HHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHH----------------------------------------
Confidence 1111 111222233344444 4578889999999862
Q ss_pred HhhcccccceeeccccccccccccC--CCccchHHHHHHHHhCCC-EEEEeCCCCCeeEeccCCChHHHhhhhhhhccc
Q 004779 414 EETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGW-TSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (731)
Q Consensus 414 ~~~~~v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~rl~~~Gw-rs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 489 (731)
.+||++ ...+||.+..++++++|| ++.|++......+...|++++++++||+||++|
T Consensus 170 -------------------~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 170 -------------------VGGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred -------------------hcCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 467874 467899999999999999 999886445778899999999999999999988
No 31
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.92 E-value=3.2e-24 Score=221.98 Aligned_cols=227 Identities=19% Similarity=0.209 Sum_probs=167.9
Q ss_pred CCCCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcc
Q 004779 89 PEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIK 168 (731)
Q Consensus 89 ~~~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~ 168 (731)
+..+..|+|+|+||+ |||+ ..+.+++.++.+++||.++++|+|+|||++|.|.+.+.+
T Consensus 23 ~~~~~~~~isVvip~---~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~------------------ 80 (251)
T cd06439 23 PDPAYLPTVTIIIPA---YNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE------------------ 80 (251)
T ss_pred CCCCCCCEEEEEEec---CCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH------------------
Confidence 335668999999999 9998 889999999999999998899999999999976532211
Q ss_pred cCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCC
Q 004779 169 TICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEM 248 (731)
Q Consensus 169 ~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~ 248 (731)
+.+ .
T Consensus 81 --------------------------------~~~-------------------------------------------~- 84 (251)
T cd06439 81 --------------------------------YAD-------------------------------------------K- 84 (251)
T ss_pred --------------------------------Hhh-------------------------------------------C-
Confidence 100 0
Q ss_pred CcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceec
Q 004779 249 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 328 (731)
Q Consensus 249 P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~ 328 (731)
++.++..++ +.+|++|+|.+++. +++|+|+++|+|.+++ |+++++++..+.++ +++.|++.....
T Consensus 85 -~v~~i~~~~-----~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~~~~~ 149 (251)
T cd06439 85 -GVKLLRFPE-----RRGKAAALNRALAL----ATGEIVVFTDANALLD-PDALRLLVRHFADP----SVGAVSGELVIV 149 (251)
T ss_pred -cEEEEEcCC-----CCChHHHHHHHHHH----cCCCEEEEEccccCcC-HHHHHHHHHHhcCC----CccEEEeEEEec
Confidence 245554443 46799999999999 8899999999999998 99999999998765 488888877665
Q ss_pred cCCCCchHHHH-HHHHHHHHHHhhhhcCC-ccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCC
Q 004779 329 NINKYDIYDGR-FRSAYCVQWQGMDGLKG-PVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGE 406 (731)
Q Consensus 329 n~~~~d~~~~~-~~~f~~~i~~g~dg~~~-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 406 (731)
+.+. ...... ...+...+.......+. ....|++.++||+++.
T Consensus 150 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~---------------------------------- 194 (251)
T cd06439 150 DGGG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFR---------------------------------- 194 (251)
T ss_pred CCcc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhc----------------------------------
Confidence 4321 111111 11111111111222222 2234555558888763
Q ss_pred CchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhh
Q 004779 407 NFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRW 486 (731)
Q Consensus 407 ~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RW 486 (731)
||+.....||.++++++..+||++.|+++ +..+...|.+..++++|+.||
T Consensus 195 ----------------------------~~~~~~~~eD~~l~~~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~r~ 244 (251)
T cd06439 195 ----------------------------PLPADTINDDFVLPLRIARQGYRVVYEPD--AVAYEEVAEDGSEEFRRRVRI 244 (251)
T ss_pred ----------------------------CCCcccchhHHHHHHHHHHcCCeEEeccc--cEEEEeCcccHHHHHHHHHHH
Confidence 44555668999999999999999999986 889999999999999999999
Q ss_pred ccccccc
Q 004779 487 GSGLTDV 493 (731)
Q Consensus 487 a~G~~qi 493 (731)
+.|++|.
T Consensus 245 ~~g~~~~ 251 (251)
T cd06439 245 AAGNLQA 251 (251)
T ss_pred HhccccC
Confidence 9999984
No 32
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.92 E-value=4e-24 Score=218.57 Aligned_cols=229 Identities=17% Similarity=0.134 Sum_probs=164.0
Q ss_pred ceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccc
Q 004779 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAY 175 (731)
Q Consensus 96 ~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~y 175 (731)
+|+|+||| |||+++.+.+|+.++.+++ | .+|+|+|||++|.|.+.+.+..
T Consensus 1 ~isVvIp~---~ne~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~----------------------- 50 (235)
T cd06434 1 DVTVIIPV---YDEDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTV----------------------- 50 (235)
T ss_pred CeEEEEee---cCCChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhc-----------------------
Confidence 58999999 9999899999999999999 4 6899999999985543221100
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEe
Q 004779 176 FSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVS 255 (731)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~ 255 (731)
..+.+.++.
T Consensus 51 -----------------------------------------------------------------------~~~~~~v~~ 59 (235)
T cd06434 51 -----------------------------------------------------------------------KYGGIFVIT 59 (235)
T ss_pred -----------------------------------------------------------------------cCCcEEEEe
Confidence 012244443
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCch
Q 004779 256 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI 335 (731)
Q Consensus 256 R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~ 335 (731)
++ +++|++|+|.+++. +++|+|+++|+|..+. |++|++++..|.|| +++.|++.+...+.+ ...
T Consensus 60 -~~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~----~v~~v~~~~~~~~~~-~~~ 123 (235)
T cd06434 60 -VP-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVWP-PNALPEMLKPFEDP----KVGGVGTNQRILRPR-DSK 123 (235)
T ss_pred -cC-----CCChHHHHHHHHHH----hCCCEEEEECCCceeC-hhHHHHHHHhccCC----CEeEEcCceEeecCc-ccH
Confidence 32 46899999999999 8999999999999998 99999999998766 599999988877642 222
Q ss_pred HHHHHHHHHHH----HHHhhhhcCCc-cccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchh
Q 004779 336 YDGRFRSAYCV----QWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSN 410 (731)
Q Consensus 336 ~~~~~~~f~~~----i~~g~dg~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 410 (731)
+......++.. ........++. .+.|...++||+++...+.. +.|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~----~~~-------------------------- 173 (235)
T cd06434 124 WSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFL----EEF-------------------------- 173 (235)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhH----HHh--------------------------
Confidence 22221222221 11223333333 34577778999998641000 000
Q ss_pred hHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhcccc
Q 004779 411 VLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 490 (731)
Q Consensus 411 ~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~ 490 (731)
.+ +.++.......||.+++.+++++||+..|++. +.++...|+++.++++||.||++|.
T Consensus 174 --~~-----------------~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~q~~Rw~~~~ 232 (235)
T cd06434 174 --TN-----------------ETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYT--SEAYTETPENYKKFLKQQLRWSRSN 232 (235)
T ss_pred --hh-----------------hhhcCCCCCcCchHHHHHHHHHCCCeEEEecC--CeEEEEcchhHHHHHHHhhhhhhcc
Confidence 00 01221224678999999999999999999986 7888889999999999999999998
Q ss_pred cc
Q 004779 491 TD 492 (731)
Q Consensus 491 ~q 492 (731)
.+
T Consensus 233 ~~ 234 (235)
T cd06434 233 WR 234 (235)
T ss_pred cC
Confidence 64
No 33
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.91 E-value=1.5e-21 Score=216.58 Aligned_cols=230 Identities=20% Similarity=0.137 Sum_probs=158.6
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccC
Q 004779 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (731)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (731)
++..|+|+|+||+ |||+ +.+.+++.++++++||. +++|+|+|||++|.|.+.+.+..+
T Consensus 36 ~~~~p~VSVIIpa---~Ne~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~----------------- 93 (384)
T TIGR03469 36 PEAWPAVVAVVPA---RNEA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAAR----------------- 93 (384)
T ss_pred CCCCCCEEEEEec---CCcH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHH-----------------
Confidence 4678999999999 9999 88999999999999995 499999999999987643222110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCc
Q 004779 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (731)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~ 250 (731)
.+ ...++
T Consensus 94 -----------------------------~~--------------------------------------------~~~~~ 100 (384)
T TIGR03469 94 -----------------------------AY--------------------------------------------GRGDR 100 (384)
T ss_pred -----------------------------hc--------------------------------------------CCCCc
Confidence 00 00013
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCC-----CCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCc
Q 004779 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISN-----SPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQ 325 (731)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~-----g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq 325 (731)
+.++..+++|. ...+|+.|+|.+++. +. +|+++++|+|..++ |+.+++++..+.+++ +++|....
T Consensus 101 i~vi~~~~~~~-g~~Gk~~A~n~g~~~----A~~~~~~gd~llflDaD~~~~-p~~l~~lv~~~~~~~----~~~vs~~~ 170 (384)
T TIGR03469 101 LTVVSGQPLPP-GWSGKLWAVSQGIAA----ARTLAPPADYLLLTDADIAHG-PDNLARLVARARAEG----LDLVSLMV 170 (384)
T ss_pred EEEecCCCCCC-CCcchHHHHHHHHHH----HhccCCCCCEEEEECCCCCCC-hhHHHHHHHHHHhCC----CCEEEecc
Confidence 56665433221 246899999999998 56 99999999999987 999999999887653 45554433
Q ss_pred eeccCCCCchHHHHH----HHHHHHHH---HhhhhcC-CccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhh
Q 004779 326 KFHNINKYDIYDGRF----RSAYCVQW---QGMDGLK-GPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQS 397 (731)
Q Consensus 326 ~f~n~~~~d~~~~~~----~~f~~~i~---~g~dg~~-~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~ 397 (731)
++.. .+.+.+.. ..++.... ...+... .....|.+.++||++++.
T Consensus 171 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~------------------------ 223 (384)
T TIGR03469 171 RLRC---ESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALER------------------------ 223 (384)
T ss_pred cccC---CCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHHH------------------------
Confidence 3321 12222111 11111111 1111111 123478889999999963
Q ss_pred hcccCCCCCCchhhHHHhhcccccceeeccccccccccccC--CCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCC
Q 004779 398 YKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTN 475 (731)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~ 475 (731)
.+||+. ..+.||++++.++.++|+++.+... ........-++
T Consensus 224 -----------------------------------vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~-~~~~s~r~~~~ 267 (384)
T TIGR03469 224 -----------------------------------IGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLA-ARTRSLRPYDG 267 (384)
T ss_pred -----------------------------------cCCHHHHhhCcccHHHHHHHHHHcCCcEEEEec-CceEEEEecCC
Confidence 457764 4689999999999999999999865 23333445569
Q ss_pred hHHHhhhhhhhcc
Q 004779 476 LNDLLIQGTRWGS 488 (731)
Q Consensus 476 l~~~~~Qr~RWa~ 488 (731)
+.+.++|+.||+.
T Consensus 268 ~~~~~~~~~r~~~ 280 (384)
T TIGR03469 268 LGEIWRMIARTAY 280 (384)
T ss_pred HHHHHHHHHHhHH
Confidence 9999999999943
No 34
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.91 E-value=4.8e-20 Score=200.77 Aligned_cols=344 Identities=16% Similarity=0.146 Sum_probs=223.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHH--HHHHHHHHHHHHHHHHhheecccc-----CCC-CCCCC
Q 004779 19 INRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVF--ASELLLSFIWLLGRAYLWRPVSRT-----VFP-ERLPE 90 (731)
Q Consensus 19 ~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~l~--~aE~~~~~~~~l~~~~~~~p~~r~-----~~~-~~l~~ 90 (731)
+.|+..+...++....-.|-....++..+..-.=..++.+ +.-+|.+..+.......+--..|+ ..| +++|
T Consensus 63 lRR~~L~~~tla~tv~at~~m~~vl~~gG~~~le~~iL~Lfa~lFcwvs~~F~tAl~GF~~L~~~~~r~~~~~p~~p~p- 141 (736)
T COG2943 63 LRRYILLGLTLAQTVVATWYMKTVLPYGGPYMLEAGILVLFAVLFCWVSAGFWTALMGFLVLLFGRDRYLSIAPNEPLP- 141 (736)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecCCCcCCCCCCCCCC-
Confidence 6788877777777776666666666653321111111111 111221111111111111111111 111 1222
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHH---HcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCc
Q 004779 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSA---MALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGI 167 (731)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~---l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v 167 (731)
+.-+-.|++|+ |||++.-|-.-+++. ++-.=-.+.+.++|+.|..++.- ++.|.. .|..+|++.+-
T Consensus 142 --~~hrTAilmPi---ynEd~~rVfAgLrA~~eSla~Tg~~~~FD~FVLSDs~dpdi--alAEq~----a~~~l~~e~~g 210 (736)
T COG2943 142 --DLHRTAILMPI---YNEDVNRVFAGLRATYESLAATGHAEHFDFFVLSDSRDPDI--ALAEQK----AWAELCRELGG 210 (736)
T ss_pred --cccceeEEeec---cccCHHHHHHHHHHHHHHHHhhCCcccceEEEEcCCCCchh--hhhHHH----HHHHHHHHhCC
Confidence 23357899999 999988665444432 22333455799999999998731 233322 24444444331
Q ss_pred ccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccC
Q 004779 168 KTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVE 247 (731)
Q Consensus 168 ~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~ 247 (731)
+
T Consensus 211 ~------------------------------------------------------------------------------- 211 (736)
T COG2943 211 E------------------------------------------------------------------------------- 211 (736)
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred CCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCcee
Q 004779 248 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKF 327 (731)
Q Consensus 248 ~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f 327 (731)
-++.|-.|.+ |.+.||||+..-.+..| +..++++++|||++.. +|.+-+++.-|. .+++.|.+||--.-
T Consensus 212 -~~ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME---~~P~aGlIQt~P~~ 280 (736)
T COG2943 212 -GNIFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLME---ANPDAGLIQTSPKA 280 (736)
T ss_pred -CceeeehHhh----hhcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHh---hCCCCceeecchhh
Confidence 1355644443 36789999999999999 8999999999999998 999999999886 44579999996655
Q ss_pred ccCCCCchHHHHHH---HHHH-HHHHhhhhcCCc--cccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhccc
Q 004779 328 HNINKYDIYDGRFR---SAYC-VQWQGMDGLKGP--VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQN 401 (731)
Q Consensus 328 ~n~~~~d~~~~~~~---~f~~-~i~~g~dg~~~~--~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 401 (731)
.|. ...|+..+. -.|. +...|...|++. .|-|.|+++|.+++.+ +
T Consensus 281 ~gg--~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~---------h------------------ 331 (736)
T COG2943 281 SGG--DTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIE---------H------------------ 331 (736)
T ss_pred cCc--chHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHH---------h------------------
Confidence 553 355654332 2343 556788888764 6899999999999875 1
Q ss_pred CCCCCCchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhh
Q 004779 402 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLI 481 (731)
Q Consensus 402 ~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~ 481 (731)
|....=. ..+.|.+..++.|+..+-.|.+.||.+-..++ -.-++++.|.|+.++++
T Consensus 332 --------------------cgLp~Lp---G~~pFgG~ilSHDfvEAALmRRaGW~v~ia~d-L~GSyEE~PpnLlD~l~ 387 (736)
T COG2943 332 --------------------CGLPPLP---GRGPFGGHILSHDFVEAALMRRAGWGVWIAYD-LDGSYEELPPNLLDELK 387 (736)
T ss_pred --------------------cCCCCCC---CCCCCCccccchHHHHHHHHhhcCceEEEecc-CCCchhhCCchHHHHHh
Confidence 1110000 02347778899999999999999998755443 47899999999999999
Q ss_pred hhhhhccccccccccccCCcccCCCCCCHhHHHHhHhHhHhh
Q 004779 482 QGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFP 523 (731)
Q Consensus 482 Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~ 523 (731)
+-+||++|++|.+. ++. .+++.+..|+.+....+.+
T Consensus 388 RDRRWC~GNLqh~r-----l~~-~~GlHwvsR~h~~tGVmsY 423 (736)
T COG2943 388 RDRRWCHGNLQHFR-----LFL-VKGLHWVSRAHFLTGVMSY 423 (736)
T ss_pred hhhHhhhcchhhce-----eec-cCCccHHHHHHHHHHHHHH
Confidence 99999999999764 343 4899999998877765544
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.86 E-value=1.4e-20 Score=193.03 Aligned_cols=225 Identities=16% Similarity=0.091 Sum_probs=161.8
Q ss_pred ceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccc
Q 004779 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAY 175 (731)
Q Consensus 96 ~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~y 175 (731)
.++|+||+ |||+ +.+.+++.++.+++||..+.+|+|+|||++|.|.+.+.+.
T Consensus 1 ~~sIiip~---~n~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~------------------------ 52 (249)
T cd02525 1 FVSIIIPV---RNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEY------------------------ 52 (249)
T ss_pred CEEEEEEc---CCch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHH------------------------
Confidence 48999999 9998 7789999999999999778999999999999654211110
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEe
Q 004779 176 FSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVS 255 (731)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~ 255 (731)
. ...|.+.++.
T Consensus 53 --------------------------~-------------------------------------------~~~~~v~~i~ 63 (249)
T cd02525 53 --------------------------A-------------------------------------------AKDPRIRLID 63 (249)
T ss_pred --------------------------H-------------------------------------------hcCCeEEEEe
Confidence 0 0023466665
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCch
Q 004779 256 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI 335 (731)
Q Consensus 256 R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~ 335 (731)
.+ .+++++|+|.|++. +++|+++++|+|.++. |++|.+++..+.+++ ...|+++....+ .+.
T Consensus 64 ~~------~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~~-~~~l~~~~~~~~~~~----~~~v~~~~~~~~---~~~ 125 (249)
T cd02525 64 NP------KRIQSAGLNIGIRN----SRGDIIIRVDAHAVYP-KDYILELVEALKRTG----ADNVGGPMETIG---ESK 125 (249)
T ss_pred CC------CCCchHHHHHHHHH----hCCCEEEEECCCccCC-HHHHHHHHHHHhcCC----CCEEecceecCC---CCh
Confidence 32 35689999999999 8999999999999986 999999998887653 455555443222 222
Q ss_pred HHHHHHHHHH-HHHHhh---hhcC---CccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCc
Q 004779 336 YDGRFRSAYC-VQWQGM---DGLK---GPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (731)
Q Consensus 336 ~~~~~~~f~~-~i~~g~---dg~~---~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 408 (731)
+.......+. ....+. .... .....|.+.++||+++..
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 170 (249)
T cd02525 126 FQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEK----------------------------------- 170 (249)
T ss_pred HHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHHH-----------------------------------
Confidence 2221111111 001111 1111 224567778899998752
Q ss_pred hhhHHHhhcccccceeeccccccccccccCC-CccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhc
Q 004779 409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWG 487 (731)
Q Consensus 409 ~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~-svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa 487 (731)
.+||+.. ...||.+.+++++++|+++.|+++ +......|.+++.+.+|+.||+
T Consensus 171 ------------------------~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~--~~~~~~~~~s~~~~~~~~~r~~ 224 (249)
T cd02525 171 ------------------------VGGFDESLVRNEDAELNYRLRKAGYKIWLSPD--IRVYYYPRSTLKKLARQYFRYG 224 (249)
T ss_pred ------------------------hCCCCcccCccchhHHHHHHHHcCcEEEEcCC--eEEEEcCCCCHHHHHHHHHHHh
Confidence 2345544 347999999999999999999985 7888889999999999999999
Q ss_pred ccccccccc
Q 004779 488 SGLTDVGLS 496 (731)
Q Consensus 488 ~G~~qi~~~ 496 (731)
.|..|....
T Consensus 225 ~~~~~~~~~ 233 (249)
T cd02525 225 KWRARTLRK 233 (249)
T ss_pred hhhHHHHHh
Confidence 999998863
No 36
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.81 E-value=4.7e-19 Score=177.31 Aligned_cols=165 Identities=18% Similarity=0.123 Sum_probs=122.2
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (731)
|+||+ |||+ +.+.+||.++++++ | +++|+|+|||++|.|.+.+. .
T Consensus 1 ViIp~---~Ne~-~~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~-~--------------------------- 45 (191)
T cd06436 1 VLVPC---LNEE-AVIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR-L--------------------------- 45 (191)
T ss_pred CEEec---cccH-HHHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh-h---------------------------
Confidence 68999 9999 89999999999999 5 48999999999997753211 0
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccC
Q 004779 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (731)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 258 (731)
+ ...+++.++.++.
T Consensus 46 -----------------------~-------------------------------------------~~~~~v~~i~~~~ 59 (191)
T cd06436 46 -----------------------A-------------------------------------------ITDSRVHLLRRHL 59 (191)
T ss_pred -----------------------e-------------------------------------------ecCCcEEEEeccC
Confidence 0 0012466776542
Q ss_pred CCCCCCCChHHHHHHHHHhcC-------CCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCC
Q 004779 259 RPEHLHHFKAGALNVLLRVSG-------VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN 331 (731)
Q Consensus 259 ~p~~~~~~KAGaLN~~l~~s~-------~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~ 331 (731)
.. .+.+|++|+|.+++.+. .-.++|+|+++|+|..++ |++|+++..+|.|| +++.||++..+.|.+
T Consensus 60 ~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~ 132 (191)
T cd06436 60 PN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAPYFSDP----RVAGTQSRVRMYNRH 132 (191)
T ss_pred Cc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHHhhcCC----ceEEEeeeEEEecCC
Confidence 11 14689999999999731 001358999999999987 99999988888776 599999999888753
Q ss_pred CCchHHH----HHHHHHHHHHHhhhhcCCccccceeEEEeccccc
Q 004779 332 KYDIYDG----RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLY 372 (731)
Q Consensus 332 ~~d~~~~----~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~ 372 (731)
.+ .+.. +....+..++.++...+...++|+|+++||++|.
T Consensus 133 ~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~ 176 (191)
T cd06436 133 KN-LLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALD 176 (191)
T ss_pred CC-HHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHH
Confidence 22 2221 2233345677888777766679999999999996
No 37
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.81 E-value=1.6e-19 Score=178.80 Aligned_cols=162 Identities=20% Similarity=0.159 Sum_probs=115.3
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (731)
|+||+ |||+ +.+.+|+.++++++||.++++|+|+|||++|.|.+.+. +++
T Consensus 1 VvIp~---~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~--------------~~~------------ 50 (183)
T cd06438 1 ILIPA---HNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVAR--------------AAG------------ 50 (183)
T ss_pred CEEec---cchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHH--------------HcC------------
Confidence 68999 9999 89999999999999998889999999999996643110 000
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccC
Q 004779 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (731)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 258 (731)
..++.|.+
T Consensus 51 ------------------------------------------------------------------------~~~~~~~~ 58 (183)
T cd06438 51 ------------------------------------------------------------------------ATVLERHD 58 (183)
T ss_pred ------------------------------------------------------------------------CeEEEeCC
Confidence 01122222
Q ss_pred CCCCCCCChHHHHHHHHHhcC-CCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHH
Q 004779 259 RPEHLHHFKAGALNVLLRVSG-VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 337 (731)
Q Consensus 259 ~p~~~~~~KAGaLN~~l~~s~-~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (731)
. ++++|++|+|.+++... .-+++|+++++|+|++++ |+++.+++..|.+. ...||+.....+... ..+.
T Consensus 59 ~---~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~-~~~~ 128 (183)
T cd06438 59 P---ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVD-PNALEELNARFAAG-----ARVVQAYYNSKNPDD-SWIT 128 (183)
T ss_pred C---CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhhC-----CCeeEEEEeeeCCcc-CHHH
Confidence 2 25789999999998731 014699999999999998 99999999988642 246777666655322 2222
Q ss_pred HH----HHHHHHHHHHhhhhcCCc-cccceeEEEeccccc
Q 004779 338 GR----FRSAYCVQWQGMDGLKGP-VLSGTGYYIKRESLY 372 (731)
Q Consensus 338 ~~----~~~f~~~i~~g~dg~~~~-~~~Gtg~~~RR~aL~ 372 (731)
.. ...++.....++..+++. .+.|+|.++||+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~ 168 (183)
T cd06438 129 RLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVLR 168 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHHH
Confidence 22 223334455577777765 568999999999995
No 38
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.76 E-value=1.5e-17 Score=165.85 Aligned_cols=137 Identities=26% Similarity=0.384 Sum_probs=111.7
Q ss_pred EEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHHHHHHHHHH----HHHhhhhcCCc-ccc
Q 004779 286 YILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCV----QWQGMDGLKGP-VLS 360 (731)
Q Consensus 286 ~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~----i~~g~dg~~~~-~~~ 360 (731)
+|+++|+|+.++ ||++++++.++.|| ++++||+|..++| .++.+.+.+...|.. .....+..+.+ .+.
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~~----~~~~vq~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALEDP----KVDAVQGPIIFRN--RGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhCC----CceEEEccEEecC--CCChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 589999999998 99999999999876 5999999999874 344455444444421 12233344443 568
Q ss_pred ceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhhcccccceeecccccccccccc-CC
Q 004779 361 GTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGIL-YQ 439 (731)
Q Consensus 361 Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~-~~ 439 (731)
|+|.++||+++.+ .+||+ +.
T Consensus 74 G~~~~~r~~~l~~-----------------------------------------------------------vg~~~~~~ 94 (193)
T PF13632_consen 74 GSGMLFRREALRE-----------------------------------------------------------VGGFDDPF 94 (193)
T ss_pred CcceeeeHHHHHH-----------------------------------------------------------hCcccccc
Confidence 9999999999962 45899 88
Q ss_pred CccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhcccc
Q 004779 440 SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 490 (731)
Q Consensus 440 svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~ 490 (731)
+++||+++++++.++|||+.|+++ +.+++.+|+|+.++++||+||..|.
T Consensus 95 ~~~ED~~l~~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 95 SIGEDMDLGFRLRRAGYRIVYVPD--AIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred cccchHHHHHHHHHCCCEEEEecc--cceeeeCCCCHHHHHHHHHHHHhhh
Confidence 999999999999999999999986 6789999999999999999999998
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.74 E-value=4.1e-17 Score=162.70 Aligned_cols=193 Identities=15% Similarity=0.099 Sum_probs=134.4
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccc
Q 004779 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (731)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (731)
|+|+|+||+ |||+.+.+.+|+.|+++++||. .+|+|+|||++|.|.+.+.+.
T Consensus 1 p~vsiii~~---~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~----------------------- 52 (202)
T cd04184 1 PLISIVMPV---YNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKK----------------------- 52 (202)
T ss_pred CeEEEEEec---ccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHH-----------------------
Confidence 689999999 9999778999999999999986 899999999998544322111
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEE
Q 004779 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (731)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv 254 (731)
|.+ ..+.+.++
T Consensus 53 --------------------------~~~-------------------------------------------~~~~~~~~ 63 (202)
T cd04184 53 --------------------------YAA-------------------------------------------QDPRIKVV 63 (202)
T ss_pred --------------------------HHh-------------------------------------------cCCCEEEE
Confidence 100 01235555
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHh-cCCCCCCcEEEEccCceeccCCCC
Q 004779 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKY 333 (731)
Q Consensus 255 ~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~ 333 (731)
..++ +.+++.|+|.+++. +++|+++++|+|.++. |++|.+++..+ .+| +++.|.+.......+.
T Consensus 64 ~~~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~~-~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~- 128 (202)
T cd04184 64 FREE-----NGGISAATNSALEL----ATGEFVALLDHDDELA-PHALYEVVKALNEHP----DADLIYSDEDKIDEGG- 128 (202)
T ss_pred Eccc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCcCC-hHHHHHHHHHHHhCC----CCCEEEccHHhccCCC-
Confidence 4443 46899999999999 8899999999999987 99999999887 555 3666766543322110
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHH
Q 004779 334 DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 413 (731)
Q Consensus 334 d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 413 (731)
...... +... ...+......+.|.++++||+++..
T Consensus 129 ~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~r~~~~~---------------------------------------- 163 (202)
T cd04184 129 KRSEPF----FKPD-WSPDLLLSQNYIGHLLVYRRSLVRQ---------------------------------------- 163 (202)
T ss_pred CEeccc----cCCC-CCHHHhhhcCCccceEeEEHHHHHH----------------------------------------
Confidence 000000 0000 0000111223456777899999852
Q ss_pred HhhcccccceeeccccccccccccCC-CccchHHHHHHHHhCCCEEEEeCC
Q 004779 414 EETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 463 (731)
Q Consensus 414 ~~~~~v~~c~ye~~t~~g~~~G~~~~-svtED~~t~~rl~~~Gwrs~y~~~ 463 (731)
.+||+.+ ...||.+.++|++.+||+.+|+++
T Consensus 164 -------------------iggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 164 -------------------VGGFREGFEGAQDYDLVLRVSEHTDRIAHIPR 195 (202)
T ss_pred -------------------hCCCCcCcccchhHHHHHHHHhccceEEEccH
Confidence 4567665 457999999999999999999985
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.71 E-value=9.8e-17 Score=160.04 Aligned_cols=190 Identities=16% Similarity=0.123 Sum_probs=133.3
Q ss_pred EEEEecCCCCCCc-hHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccc
Q 004779 98 DVFICTADPEKEP-AIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (731)
Q Consensus 98 dV~I~t~~pynEp-~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (731)
+|+||| |||+ ++.+++|+.|+++++||. .+|+|+|||+++.+...+.+
T Consensus 1 sviip~---~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~-------------------------- 49 (201)
T cd04195 1 SVLMSV---YIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLE-------------------------- 49 (201)
T ss_pred CEEEEc---cccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHH--------------------------
Confidence 589999 9986 478999999999999995 68999999995532221111
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEec
Q 004779 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSR 256 (731)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R 256 (731)
.|.+ ..| +.++..
T Consensus 50 -----------------------~~~~-------------------------------------------~~~-i~~i~~ 62 (201)
T cd04195 50 -----------------------EFKR-------------------------------------------KLP-LKVVPL 62 (201)
T ss_pred -----------------------HHHh-------------------------------------------cCC-eEEEEc
Confidence 1100 112 667766
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchH
Q 004779 257 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIY 336 (731)
Q Consensus 257 ~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (731)
++ +.|+++|+|.|++. ++||+|+++|+|.++. |+++++++..|.+ +++++.|.+.....+.+.....
T Consensus 63 ~~-----n~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~~-~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 129 (201)
T cd04195 63 EK-----NRGLGKALNEGLKH----CTYDWVARMDTDDISL-PDRFEKQLDFIEK---NPEIDIVGGGVLEFDSDGNDIG 129 (201)
T ss_pred Cc-----cccHHHHHHHHHHh----cCCCEEEEeCCccccC-cHHHHHHHHHHHh---CCCeEEEcccEEEECCCCCeec
Confidence 55 36899999999999 8999999999999988 9999999998852 2358888877655433221111
Q ss_pred HH----HHHHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhH
Q 004779 337 DG----RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVL 412 (731)
Q Consensus 337 ~~----~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 412 (731)
.. .....+.. . .....++|.+.++||+++..
T Consensus 130 ~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~rr~~~~~--------------------------------------- 164 (201)
T cd04195 130 KRRLPTSHDDILKF---A---RRRSPFNHPTVMFRKSKVLA--------------------------------------- 164 (201)
T ss_pred cccCCCCHHHHHHH---h---ccCCCCCChHHhhhHHHHHH---------------------------------------
Confidence 00 01111111 1 11223456667899998752
Q ss_pred HHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCC
Q 004779 413 QEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTP 463 (731)
Q Consensus 413 ~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~ 463 (731)
.+||......||.++.+++..+|+++.|+++
T Consensus 165 --------------------~g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~ 195 (201)
T cd04195 165 --------------------VGGYQDLPLVEDYALWARMLANGARFANLPE 195 (201)
T ss_pred --------------------cCCcCCCCCchHHHHHHHHHHcCCceecccH
Confidence 4577777889999999999999999999975
No 41
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.66 E-value=1.3e-15 Score=150.38 Aligned_cols=186 Identities=17% Similarity=0.103 Sum_probs=129.8
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccccc
Q 004779 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (731)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (731)
+|+||| |||+ +.+++++.++.+++||. ++|+|+|||++|.|.+.+.+
T Consensus 1 sivi~~---~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~--------------------------- 47 (202)
T cd06433 1 SIITPT---YNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKK--------------------------- 47 (202)
T ss_pred CEEEec---cchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHH---------------------------
Confidence 489999 9998 89999999999999987 89999999999966432111
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEecc
Q 004779 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (731)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~ 257 (731)
+.+ ...++..+
T Consensus 48 -----------------------~~~----------------------------------------------~~~~~~~~ 58 (202)
T cd06433 48 -----------------------YED----------------------------------------------KITYWISE 58 (202)
T ss_pred -----------------------hHh----------------------------------------------hcEEEEec
Confidence 000 01233333
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHh-cCCCCCCcEEEEccCceeccCCCCchH
Q 004779 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYDIY 336 (731)
Q Consensus 258 k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (731)
+ ..++++|+|.|++. +++|+|+++|+|..+. |+.+.+.+..+ .++ +.++|.+...+.+.+.....
T Consensus 59 ~-----~~g~~~a~n~~~~~----a~~~~v~~ld~D~~~~-~~~~~~~~~~~~~~~----~~~~v~g~~~~~~~~~~~~~ 124 (202)
T cd06433 59 P-----DKGIYDAMNKGIAL----ATGDIIGFLNSDDTLL-PGALLAVVAAFAEHP----EVDVVYGDVLLVDENGRVIG 124 (202)
T ss_pred C-----CcCHHHHHHHHHHH----cCCCEEEEeCCCcccC-chHHHHHHHHHHhCC----CccEEEeeeEEEcCCCCccc
Confidence 3 36899999999999 8999999999999988 89999988444 444 46667666555433221111
Q ss_pred HHHHHHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhh
Q 004779 337 DGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEET 416 (731)
Q Consensus 337 ~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 416 (731)
... ...............+|++.++||+++..
T Consensus 125 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------- 156 (202)
T cd06433 125 RRR-----PPPFLDKFLLYGMPICHQATFFRRSLFEK------------------------------------------- 156 (202)
T ss_pred CCC-----CcchhhhHHhhcCcccCcceEEEHHHHHH-------------------------------------------
Confidence 000 00001112223445678888999999852
Q ss_pred cccccceeeccccccccccccCC-CccchHHHHHHHHhCCCEEEEeCC
Q 004779 417 GVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 463 (731)
Q Consensus 417 ~~v~~c~ye~~t~~g~~~G~~~~-svtED~~t~~rl~~~Gwrs~y~~~ 463 (731)
.+||+.+ ...||.+..+++.++|++.+++++
T Consensus 157 ----------------~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 157 ----------------YGGFDESYRIAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred ----------------hCCCchhhCchhhHHHHHHHHHcCCceEecch
Confidence 2346544 568999999999999999998875
No 42
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.65 E-value=1.4e-15 Score=162.71 Aligned_cols=110 Identities=18% Similarity=0.077 Sum_probs=88.7
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccccc
Q 004779 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (731)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (731)
+|+||+ |||+++.+.+||.|+++++||....+|+|+|||++|.|.+.+.+..
T Consensus 1 SIIIp~---~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~------------------------- 52 (299)
T cd02510 1 SVIIIF---HNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEY------------------------- 52 (299)
T ss_pred CEEEEE---ecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHH-------------------------
Confidence 589999 9999889999999999999987667999999999997654321100
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEecc
Q 004779 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (731)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~ 257 (731)
. ....|++.++..+
T Consensus 53 -----------------------~-------------------------------------------~~~~~~v~vi~~~ 66 (299)
T cd02510 53 -----------------------Y-------------------------------------------KKYLPKVKVLRLK 66 (299)
T ss_pred -----------------------H-------------------------------------------hhcCCcEEEEEcC
Confidence 0 0112457777655
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcC
Q 004779 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (731)
Q Consensus 258 k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D 311 (731)
+ +.+++.|.|.|++. ++||+|+++|+|..+. |++|.+++..+..
T Consensus 67 ~-----n~G~~~a~N~g~~~----A~gd~i~fLD~D~~~~-~~wL~~ll~~l~~ 110 (299)
T cd02510 67 K-----REGLIRARIAGARA----ATGDVLVFLDSHCEVN-VGWLEPLLARIAE 110 (299)
T ss_pred C-----CCCHHHHHHHHHHH----ccCCEEEEEeCCcccC-ccHHHHHHHHHHh
Confidence 4 47899999999999 8999999999999996 9999999998764
No 43
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.65 E-value=1e-14 Score=151.26 Aligned_cols=171 Identities=13% Similarity=0.031 Sum_probs=107.1
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCc
Q 004779 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (731)
Q Consensus 93 ~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (731)
..|.|+|+||+ |||+ ..+..++.++.....+...++|+|+|||++|.|.+.+.+..
T Consensus 7 ~~~~vsVvIp~---yne~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~-------------------- 62 (243)
T PLN02726 7 GAMKYSIIVPT---YNER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQ-------------------- 62 (243)
T ss_pred CCceEEEEEcc---CCch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHH--------------------
Confidence 45899999999 9999 66778877776533222259999999999998764322210
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEE
Q 004779 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (731)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~ 252 (731)
+.| ..+.+.
T Consensus 63 --------------------------~~~---------------------------------------------~~~~v~ 71 (243)
T PLN02726 63 --------------------------KVY---------------------------------------------GEDRIL 71 (243)
T ss_pred --------------------------Hhc---------------------------------------------CCCcEE
Confidence 000 001355
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCC-
Q 004779 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN- 331 (731)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~- 331 (731)
++.+++ +.+|++|+|.|++. ++||+|+++|+|...+ |+.|.+++..+.+++ ...|.+.....+..
T Consensus 72 ~~~~~~-----n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~r~~~~~~~ 137 (243)
T PLN02726 72 LRPRPG-----KLGLGTAYIHGLKH----ASGDFVVIMDADLSHH-PKYLPSFIKKQRETG----ADIVTGTRYVKGGGV 137 (243)
T ss_pred EEecCC-----CCCHHHHHHHHHHH----cCCCEEEEEcCCCCCC-HHHHHHHHHHHHhcC----CcEEEEccccCCCCc
Confidence 555444 46799999999999 8999999999999986 999999998886542 45555543222111
Q ss_pred CCchHHHH-HHHHHHHHHHhhhhcCCccccceeEEEeccccc
Q 004779 332 KYDIYDGR-FRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLY 372 (731)
Q Consensus 332 ~~d~~~~~-~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~ 372 (731)
..-.+... ....+.....-..+.+....+|...++||+++.
T Consensus 138 ~~~~~~r~~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~~ 179 (243)
T PLN02726 138 HGWDLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSALE 179 (243)
T ss_pred CCccHHHHHHHHHHHHHHHHHhCCCCCcCCCcccceeHHHHH
Confidence 01111111 111222222222222333456666689999986
No 44
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.63 E-value=4.6e-15 Score=148.61 Aligned_cols=193 Identities=16% Similarity=0.123 Sum_probs=131.1
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccccc
Q 004779 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (731)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (731)
+|+||| |||+ ..+.+++.|+++++|| +++|+|+|||++|.|.+.+.+.++ +
T Consensus 1 sIvIp~---yn~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~~----------~------------- 51 (214)
T cd04196 1 AVLMAT---YNGE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYID----------K------------- 51 (214)
T ss_pred CEEEEe---cCcH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHHh----------c-------------
Confidence 589999 9999 8899999999999999 499999999999977643322110 0
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEecc
Q 004779 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (731)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~ 257 (731)
|| +.+.++..+
T Consensus 52 ---------------------------------------------~~------------------------~~~~~~~~~ 62 (214)
T cd04196 52 ---------------------------------------------DP------------------------FIIILIRNG 62 (214)
T ss_pred ---------------------------------------------CC------------------------ceEEEEeCC
Confidence 00 124444444
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHh-cCCCCCCcEEEEccCceeccCCCCchH
Q 004779 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYDIY 336 (731)
Q Consensus 258 k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (731)
+ .+++++|+|.++.. ++||+|+++|+|.++. |+.|.+++..+ .++ ..+++.+.....+.+.. ..
T Consensus 63 ~-----~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~~-~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~ 127 (214)
T cd04196 63 K-----NLGVARNFESLLQA----ADGDYVFFCDQDDIWL-PDKLERLLKAFLKDD----KPLLVYSDLELVDENGN-PI 127 (214)
T ss_pred C-----CccHHHHHHHHHHh----CCCCEEEEECCCcccC-hhHHHHHHHHHhcCC----CceEEecCcEEECCCCC-Cc
Confidence 3 47899999999998 8999999999999987 99999999984 443 46777776654432211 11
Q ss_pred HHHHHHHHHH--HHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHH
Q 004779 337 DGRFRSAYCV--QWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQE 414 (731)
Q Consensus 337 ~~~~~~f~~~--i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 414 (731)
.......... ............++|+++++||+++..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----------------------------------------- 166 (214)
T cd04196 128 GESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLEL----------------------------------------- 166 (214)
T ss_pred ccccccccccCCccCHHHHHHhCccCCceeeEEHHHHHh-----------------------------------------
Confidence 1000000000 000111122345678899999999852
Q ss_pred hhcccccceeeccccccccccccCC-CccchHHHHHHHHhCCCEEEEeCC
Q 004779 415 ETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 463 (731)
Q Consensus 415 ~~~~v~~c~ye~~t~~g~~~G~~~~-svtED~~t~~rl~~~Gwrs~y~~~ 463 (731)
.++++.. ...||....+++.. |++..|+++
T Consensus 167 ------------------~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~ 197 (214)
T cd04196 167 ------------------ALPFPDADVIMHDWWLALLASA-FGKVVFLDE 197 (214)
T ss_pred ------------------hccccccccccchHHHHHHHHH-cCceEEcch
Confidence 3345555 67899999988877 678888875
No 45
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.62 E-value=8e-15 Score=140.30 Aligned_cols=157 Identities=17% Similarity=0.177 Sum_probs=122.5
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (731)
|+||+ |||+ +.+.+|+.++.+++||. .+|+|+|||+++.|.+.+.+.
T Consensus 1 vii~~---~~~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~~~~--------------------------- 47 (166)
T cd04186 1 IIIVN---YNSL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELLREL--------------------------- 47 (166)
T ss_pred CEEEe---cCCH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHHHHh---------------------------
Confidence 58999 9996 89999999999999964 799999999998554322110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccC
Q 004779 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (731)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 258 (731)
.+++.++..++
T Consensus 48 ---------------------------------------------------------------------~~~~~~~~~~~ 58 (166)
T cd04186 48 ---------------------------------------------------------------------FPEVRLIRNGE 58 (166)
T ss_pred ---------------------------------------------------------------------CCCeEEEecCC
Confidence 00245555443
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHH
Q 004779 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG 338 (731)
Q Consensus 259 ~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~ 338 (731)
+.++++|+|.+++. +++++++++|+|.++. |+++.+.+..+.+ .++++.+++.
T Consensus 59 -----~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~---~~~~~~~~~~-------------- 111 (166)
T cd04186 59 -----NLGFGAGNNQGIRE----AKGDYVLLLNPDTVVE-PGALLELLDAAEQ---DPDVGIVGPK-------------- 111 (166)
T ss_pred -----CcChHHHhhHHHhh----CCCCEEEEECCCcEEC-ccHHHHHHHHHHh---CCCceEEEcc--------------
Confidence 46899999999999 7999999999999987 9999999986653 2357777543
Q ss_pred HHHHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhhcc
Q 004779 339 RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGV 418 (731)
Q Consensus 339 ~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (731)
++|++.++||+++..
T Consensus 112 --------------------~~~~~~~~~~~~~~~--------------------------------------------- 126 (166)
T cd04186 112 --------------------VSGAFLLVRREVFEE--------------------------------------------- 126 (166)
T ss_pred --------------------CceeeEeeeHHHHHH---------------------------------------------
Confidence 688899999998852
Q ss_pred cccceeeccccccccccccCC--CccchHHHHHHHHhCCCEEEEeCC
Q 004779 419 LASCSYEHQTKWGEEVGILYQ--SVSEDLFTGFILHCKGWTSTYLTP 463 (731)
Q Consensus 419 v~~c~ye~~t~~g~~~G~~~~--svtED~~t~~rl~~~Gwrs~y~~~ 463 (731)
.+||+.. ...||.+.++++.++||++.++++
T Consensus 127 --------------~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~ 159 (166)
T cd04186 127 --------------VGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQ 159 (166)
T ss_pred --------------cCCCChhhhccccHHHHHHHHHHcCCeEEEccc
Confidence 2355543 245999999999999999999875
No 46
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.61 E-value=1.9e-14 Score=145.47 Aligned_cols=178 Identities=17% Similarity=0.093 Sum_probs=122.5
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccc
Q 004779 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (731)
Q Consensus 97 VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (731)
|+|+||+ |||+ +.+.+++.|++++.|+. .+|+|+|||++|.|.+.+.+
T Consensus 1 vsvii~~---~n~~-~~l~~~l~sl~~q~~~~--~evivvdd~s~d~~~~~~~~-------------------------- 48 (221)
T cd02522 1 LSIIIPT---LNEA-ENLPRLLASLRRLNPLP--LEIIVVDGGSTDGTVAIARS-------------------------- 48 (221)
T ss_pred CEEEEEc---cCcH-HHHHHHHHHHHhccCCC--cEEEEEeCCCCccHHHHHhc--------------------------
Confidence 6899999 9998 67899999999999954 89999999999855321100
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEec
Q 004779 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSR 256 (731)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R 256 (731)
+++.++.
T Consensus 49 ------------------------------------------------------------------------~~~~~~~- 55 (221)
T cd02522 49 ------------------------------------------------------------------------AGVVVIS- 55 (221)
T ss_pred ------------------------------------------------------------------------CCeEEEe-
Confidence 1244543
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchH
Q 004779 257 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIY 336 (731)
Q Consensus 257 ~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 336 (731)
. ..+|++++|.|+.. +++++|+++|+|.++. |+++++++..+.++. ...+.....+.+. +..
T Consensus 56 -~-----~~g~~~a~n~g~~~----a~~~~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~~~~~~~~~~~---~~~ 117 (221)
T cd02522 56 -S-----PKGRARQMNAGAAA----ARGDWLLFLHADTRLP-PDWDAAIIETLRADG----AVAGAFRLRFDDP---GPR 117 (221)
T ss_pred -C-----CcCHHHHHHHHHHh----ccCCEEEEEcCCCCCC-hhHHHHHHHHhhcCC----cEEEEEEeeecCC---ccc
Confidence 2 24699999999998 8899999999999997 999999876665432 3333222333322 111
Q ss_pred HHHHHHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhh
Q 004779 337 DGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEET 416 (731)
Q Consensus 337 ~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 416 (731)
... .......+....+..+.+.|.++||+++..
T Consensus 118 ~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~------------------------------------------- 150 (221)
T cd02522 118 LRL----LELGANLRSRLFGLPYGDQGLFIRRELFEE------------------------------------------- 150 (221)
T ss_pred hhh----hhhcccceecccCCCcCCceEEEEHHHHHH-------------------------------------------
Confidence 110 111111111122333455677888888752
Q ss_pred cccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEE
Q 004779 417 GVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTY 460 (731)
Q Consensus 417 ~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y 460 (731)
.+||++....||++.++|+..+|++..+
T Consensus 151 ----------------~G~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 151 ----------------LGGFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred ----------------hCCCCccccccHHHHHHHHHhCCCEEEc
Confidence 4578888889999999999999999876
No 47
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.61 E-value=2.4e-14 Score=140.31 Aligned_cols=170 Identities=18% Similarity=0.128 Sum_probs=119.7
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (731)
|+||+ |||+ +.+++||.|+.+++|+. .+|+|+|||+++.|.+.+.+..
T Consensus 1 ivip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~~~~~~~~-------------------------- 48 (182)
T cd06420 1 LIITT---YNRP-EALELVLKSVLNQSILP--FEVIIADDGSTEETKELIEEFK-------------------------- 48 (182)
T ss_pred CEEee---cCCh-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhHHHHHHHHH--------------------------
Confidence 67999 9999 78999999999999986 7999999999986543211100
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccC
Q 004779 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (731)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 258 (731)
+ + ... .+.++.+++
T Consensus 49 ------------------------~---~--------------------------------------~~~-~~~~~~~~~ 62 (182)
T cd06420 49 ------------------------S---Q--------------------------------------FPI-PIKHVWQED 62 (182)
T ss_pred ------------------------h---h--------------------------------------cCC-ceEEEEcCC
Confidence 0 0 000 134444432
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHH
Q 004779 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG 338 (731)
Q Consensus 259 ~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~ 338 (731)
. ..+|++++|.+++. ++||+|+++|+|.+++ |++|++++..+ ++ .+++ .+++...+.+...
T Consensus 63 ~----~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~~~~~~-~~----~~~v-~g~~~~~~~~~~~---- 123 (182)
T cd06420 63 E----GFRKAKIRNKAIAA----AKGDYLIFIDGDCIPH-PDFIADHIELA-EP----GVFL-SGSRVLLNEKLTE---- 123 (182)
T ss_pred c----chhHHHHHHHHHHH----hcCCEEEEEcCCcccC-HHHHHHHHHHh-CC----CcEE-ecceeecccccce----
Confidence 1 34799999999999 8999999999999997 99999999877 43 2443 3444433221110
Q ss_pred HHHHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhhcc
Q 004779 339 RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGV 418 (731)
Q Consensus 339 ~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (731)
..+.|+++.++|+++..
T Consensus 124 ------------------~~~~~~~~~~~r~~~~~--------------------------------------------- 140 (182)
T cd06420 124 ------------------RGIRGCNMSFWKKDLLA--------------------------------------------- 140 (182)
T ss_pred ------------------eEeccceEEEEHHHHHH---------------------------------------------
Confidence 34467777888887752
Q ss_pred cccceeeccccccccccccCCC---ccchHHHHHHHHhCCCEEEEeC
Q 004779 419 LASCSYEHQTKWGEEVGILYQS---VSEDLFTGFILHCKGWTSTYLT 462 (731)
Q Consensus 419 v~~c~ye~~t~~g~~~G~~~~s---vtED~~t~~rl~~~Gwrs~y~~ 462 (731)
.+||+... -.||++.++|+.++|++..++.
T Consensus 141 --------------~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~ 173 (182)
T cd06420 141 --------------VNGFDEEFTGWGGEDSELVARLLNSGIKFRKLK 173 (182)
T ss_pred --------------hCCCCcccccCCcchHHHHHHHHHcCCcEEEec
Confidence 45666542 2699999999999997766654
No 48
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.60 E-value=4.3e-14 Score=143.68 Aligned_cols=111 Identities=14% Similarity=0.099 Sum_probs=83.1
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (731)
|+||+ |||+ +.+.+|+.|+++++||. ..+|+|+|||++|.|.+.+.+
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~---------------------------- 47 (219)
T cd06913 1 IILPV---HNGE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEK---------------------------- 47 (219)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHH----------------------------
Confidence 68999 9998 89999999999999983 599999999999977542221
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccC
Q 004779 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (731)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 258 (731)
|.+ +. ..+++.++..+.
T Consensus 48 ----------------------~~~---~~--------------------------------------~~~~~~~~~~~~ 64 (219)
T cd06913 48 ----------------------WRK---KL--------------------------------------EDSGVIVLVGSH 64 (219)
T ss_pred ----------------------HHH---hC--------------------------------------cccCeEEEEecc
Confidence 100 00 011355554433
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcC
Q 004779 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (731)
Q Consensus 259 ~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D 311 (731)
+.+ .+.+.+.|+|.|++. ++||+++++|+|..+. |+.+.+.+..+.+
T Consensus 65 ~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~~~~-~~~l~~~~~~~~~ 111 (219)
T cd06913 65 NSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDDVMM-PQRIRLQYEAALQ 111 (219)
T ss_pred cCC-CCccHHHHHHHHHHh----cCCCEEEEECCCccCC-hhHHHHHHHHHHh
Confidence 211 246899999999999 8999999999999987 8999888776653
No 49
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.60 E-value=3.7e-14 Score=143.66 Aligned_cols=194 Identities=13% Similarity=0.005 Sum_probs=126.1
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (731)
|+||+ |||+ ..+.+++.++.++.|+ ...+|+|+|||++|.|.+.+.+
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~---------------------------- 47 (224)
T cd06442 1 IIIPT---YNER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRE---------------------------- 47 (224)
T ss_pred CeEec---cchh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHH----------------------------
Confidence 68999 9998 7799999999999982 3499999999999976532111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccC
Q 004779 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (731)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 258 (731)
|.+ ..|.+.++..++
T Consensus 48 ----------------------~~~-------------------------------------------~~~~i~~~~~~~ 62 (224)
T cd06442 48 ----------------------LAK-------------------------------------------EYPRVRLIVRPG 62 (224)
T ss_pred ----------------------HHH-------------------------------------------hCCceEEEecCC
Confidence 100 012345555554
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCC-CCchHH
Q 004779 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN-KYDIYD 337 (731)
Q Consensus 259 ~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~-~~d~~~ 337 (731)
+.+|++|+|.+++. +.||+|+++|+|..+. |+.|..++..+.+++ .+.|.++....... .+..+.
T Consensus 63 -----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~~~~~~~~~~~~~~~ 128 (224)
T cd06442 63 -----KRGLGSAYIEGFKA----ARGDVIVVMDADLSHP-PEYIPELLEAQLEGG----ADLVIGSRYVEGGGVEGWGLK 128 (224)
T ss_pred -----CCChHHHHHHHHHH----cCCCEEEEEECCCCCC-HHHHHHHHHHHhcCC----CCEEEEeeeecCCccCCCcHH
Confidence 47899999999999 8899999999999987 999999999876553 34454443222111 111111
Q ss_pred HHHH-HHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhh
Q 004779 338 GRFR-SAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEET 416 (731)
Q Consensus 338 ~~~~-~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 416 (731)
.... ........-..+.+.....|++.++||+++..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~------------------------------------------- 165 (224)
T cd06442 129 RKLISRGANLLARLLLGRKVSDPTSGFRAYRREVLEK------------------------------------------- 165 (224)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCccchhhHHHHHH-------------------------------------------
Confidence 1100 01111111111223344566666899999853
Q ss_pred cccccceeeccccccccc-cccCCCccchHHHHHHHHhCCCEEEEeCC
Q 004779 417 GVLASCSYEHQTKWGEEV-GILYQSVSEDLFTGFILHCKGWTSTYLTP 463 (731)
Q Consensus 417 ~~v~~c~ye~~t~~g~~~-G~~~~svtED~~t~~rl~~~Gwrs~y~~~ 463 (731)
.+ ++......+|.+..+++...||++.+.+.
T Consensus 166 ----------------ig~~~~~~~~~~~~~l~~~~~~~g~~i~~~p~ 197 (224)
T cd06442 166 ----------------LIDSLVSKGYKFQLELLVRARRLGYRIVEVPI 197 (224)
T ss_pred ----------------HhhhccCCCcEEeHHHHHHHHHcCCeEEEeCe
Confidence 11 12223345678899999999999999863
No 50
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.57 E-value=2.6e-14 Score=141.92 Aligned_cols=153 Identities=18% Similarity=0.197 Sum_probs=117.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHHHHH-H
Q 004779 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR-S 342 (731)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~-~ 342 (731)
.+.|.+||.++++. . +++|+++++|+|+.++ |++|++++..+.||+ +|.|.++....+. +.+....+ .
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p~----vglVt~~~~~~~~---~~~~~~l~~~ 83 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLADPG----VGLVTGLPRGVPA---RGFWSRLEAA 83 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhCCC----CcEEEecccccCC---cCHHHHHHHH
Confidence 57899999999996 3 7899999999999998 999999999999874 9999877665543 23433332 2
Q ss_pred HHHHHHHhhh-hcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhhccccc
Q 004779 343 AYCVQWQGMD-GLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLAS 421 (731)
Q Consensus 343 f~~~i~~g~d-g~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 421 (731)
++.....-.. .-+..++.|....+||++|+.
T Consensus 84 ~~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~~------------------------------------------------ 115 (175)
T PF13506_consen 84 FFNFLPGVLQALGGAPFAWGGSMAFRREALEE------------------------------------------------ 115 (175)
T ss_pred HHhHHHHHHHHhcCCCceecceeeeEHHHHHH------------------------------------------------
Confidence 2211111111 224567889999999999963
Q ss_pred ceeeccccccccccccC--CCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccC----CChHHHhhhhhhhcc
Q 004779 422 CSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTST----TNLNDLLIQGTRWGS 488 (731)
Q Consensus 422 c~ye~~t~~g~~~G~~~--~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP----~~l~~~~~Qr~RWa~ 488 (731)
.+||.. +.++||+.+|-+++++|||++..+. +......| .+++++++++.||++
T Consensus 116 -----------~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~--~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 116 -----------IGGFEALADYLADDYALGRRLRARGYRVVLSPY--PVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred -----------cccHHHHhhhhhHHHHHHHHHHHCCCeEEEcch--heeecccCccccccHHHHHHHHHhhcC
Confidence 346554 6899999999999999999999874 66666677 489999999999985
No 51
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.55 E-value=2.8e-12 Score=145.66 Aligned_cols=165 Identities=15% Similarity=0.169 Sum_probs=106.7
Q ss_pred CCCCEEEEeCCCCCCCChHHHHHHHHHhc-CCCCCCcEEEEccCceeccCCCCchHH--HHHHHHH-HHHHHhhhhc-CC
Q 004779 282 SNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIYD--GRFRSAY-CVQWQGMDGL-KG 356 (731)
Q Consensus 282 t~g~~il~lDaD~~~~~p~~l~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~d~~~--~~~~~f~-~~i~~g~dg~-~~ 356 (731)
...|||+.+|||+.+. |+++.+++.-+. || +++-|.+.-+..|... .... +..+.+. ...+++.+.. |+
T Consensus 200 ~~~~~il~~DaDt~~~-p~~~~~lv~~m~~d~----~i~gvCG~t~i~n~~~-s~~t~~Q~fEY~ish~l~Ka~Es~fG~ 273 (527)
T PF03142_consen 200 DFYEYILMVDADTKFD-PDSVNRLVDAMERDP----KIGGVCGETRIDNKGQ-SWWTMYQVFEYAISHHLQKAFESVFGS 273 (527)
T ss_pred cceEEEEEecCCceEc-HHHHHHHHHHHcCCC----CeEEEeceeEEcCCCC-CHhhheeccchhHHHHHHHHHHHHhCc
Confidence 3469999999999987 999999998775 55 5887877655665421 1211 2222222 3345555554 44
Q ss_pred cc-ccceeEEEeccccccc-cch------hhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhhcccccceeeccc
Q 004779 357 PV-LSGTGYYIKRESLYAD-FTH------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQT 428 (731)
Q Consensus 357 ~~-~~Gtg~~~RR~aL~~~-~~~------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t 428 (731)
.. +.|.-+++|-+|+... ... .+..++|... . .+-+
T Consensus 274 VtCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~~~--~-------------------~dtl--------------- 317 (527)
T PF03142_consen 274 VTCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYSEN--P-------------------VDTL--------------- 317 (527)
T ss_pred eeecCCcceeeeeehhccccccccccccchHHHHHHhhc--c-------------------chHH---------------
Confidence 33 3688889999998751 000 0111111000 0 0000
Q ss_pred cccccccccCCCccchHHHHHHHHhC--CCEEEEeCCCCCeeEeccCCChHHHhhhhhhhccccccccc
Q 004779 429 KWGEEVGILYQSVSEDLFTGFILHCK--GWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGL 495 (731)
Q Consensus 429 ~~g~~~G~~~~svtED~~t~~rl~~~--Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~ 495 (731)
. . ..-..+.||-.++-.|.++ |||..|++. +.++..+|++++.++.||+||..|++-.++
T Consensus 318 -h--~--~nl~~lGEDR~LttLlLk~~~~~k~~y~~~--A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 318 -H--Q--KNLLDLGEDRWLTTLLLKQFPGYKTEYVPS--AVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred -H--H--HhhhhcchhHHHHHHHHhhCCCceEEEccc--ccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 0 0 0112578999888777776 899999986 899999999999999999999999986543
No 52
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.54 E-value=5.9e-14 Score=152.81 Aligned_cols=116 Identities=18% Similarity=0.203 Sum_probs=91.8
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcc
Q 004779 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (731)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~ 173 (731)
.|.|+|+||+ ||++ +.+.+|+.|+++++|+. ++|+|+|||++|.|.+.+.+
T Consensus 5 ~p~vSVIIP~---yN~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~~i~~~----------------------- 55 (328)
T PRK10073 5 TPKLSIIIPL---YNAG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKH----------------------- 55 (328)
T ss_pred CCeEEEEEec---cCCH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHHHHHHH-----------------------
Confidence 5899999999 9999 89999999999999986 99999999999976542211
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEE
Q 004779 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (731)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~y 253 (731)
|.+ ..|++.+
T Consensus 56 ---------------------------~~~-------------------------------------------~~~~i~v 65 (328)
T PRK10073 56 ---------------------------YAE-------------------------------------------NYPHVRL 65 (328)
T ss_pred ---------------------------HHh-------------------------------------------hCCCEEE
Confidence 100 1235667
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEE
Q 004779 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV 321 (731)
Q Consensus 254 v~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~V 321 (731)
+.. + +.|.++|.|.|++. ++||||+++|+|..+. |+.+.+++..+.++ +.+++..
T Consensus 66 i~~-~-----n~G~~~arN~gl~~----a~g~yi~flD~DD~~~-p~~l~~l~~~~~~~--~~dvv~~ 120 (328)
T PRK10073 66 LHQ-A-----NAGVSVARNTGLAV----ATGKYVAFPDADDVVY-PTMYETLMTMALED--DLDVAQC 120 (328)
T ss_pred EEC-C-----CCChHHHHHHHHHh----CCCCEEEEECCCCccC-hhHHHHHHHHHHhC--CCCEEEE
Confidence 653 2 46899999999999 8999999999999987 99999999877543 2345443
No 53
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.54 E-value=1.7e-13 Score=137.06 Aligned_cols=173 Identities=15% Similarity=0.055 Sum_probs=124.6
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (731)
|+||| |||+ ..+.+++.|+++++||. .+|+|+|||++|.|.+.+.+. +
T Consensus 1 viI~~---~n~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~~--------------~------------ 48 (202)
T cd04185 1 AVVVT---YNRL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTSL--------------G------------ 48 (202)
T ss_pred CEEEe---eCCH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHHh--------------c------------
Confidence 68999 9999 88999999999999995 689999999999765321110 0
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccC
Q 004779 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (731)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 258 (731)
... .+.++.-++
T Consensus 49 -------------------------------------------------------------------~~~-~i~~~~~~~ 60 (202)
T cd04185 49 -------------------------------------------------------------------DLD-NIVYLRLPE 60 (202)
T ss_pred -------------------------------------------------------------------CCC-ceEEEECcc
Confidence 001 155665544
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHH
Q 004779 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG 338 (731)
Q Consensus 259 ~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~ 338 (731)
..+++.++|.+++..- -+++|+++++|+|.+++ |+++++++..+.++ +++.+ +|..+.. +.
T Consensus 61 -----n~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~-~~~l~~l~~~~~~~----~~~~~-~~~~~~~----~~--- 121 (202)
T cd04185 61 -----NLGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPD-PDALEKLLAYADKD----NPQFL-APLVLDP----DG--- 121 (202)
T ss_pred -----ccchhhHHHHHHHHHh-ccCCCEEEEeCCCCCcC-hHHHHHHHHHHhcC----CceEe-cceeEcC----CC---
Confidence 3578889999887632 25799999999999997 99999999988755 36766 3444432 10
Q ss_pred HHHHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhhcc
Q 004779 339 RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGV 418 (731)
Q Consensus 339 ~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (731)
+++|.++||+++..
T Consensus 122 ---------------------~~~~~~~~~~~~~~--------------------------------------------- 135 (202)
T cd04185 122 ---------------------SFVGVLISRRVVEK--------------------------------------------- 135 (202)
T ss_pred ---------------------ceEEEEEeHHHHHH---------------------------------------------
Confidence 45678999999852
Q ss_pred cccceeeccccccccccccC--CCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccC
Q 004779 419 LASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTST 473 (731)
Q Consensus 419 v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP 473 (731)
.+|+.. ....||.+.+.++..+|++. |+++ +...-..+
T Consensus 136 --------------~g~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~--~~~~h~~~ 175 (202)
T cd04185 136 --------------IGLPDKEFFIWGDDTEYTLRASKAGPGI-YVPD--AVVVHKTA 175 (202)
T ss_pred --------------hCCCChhhhccchHHHHHHHHHHcCCcE-Eecc--eEEEEccc
Confidence 122322 13469999999999999999 9986 44444333
No 54
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.51 E-value=6.2e-13 Score=134.45 Aligned_cols=107 Identities=20% Similarity=0.125 Sum_probs=82.0
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCC--CCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDY--PVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dY--P~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (731)
|+||+ |||+ ..+.+++.+++++.+ +....+|+|+|||++|.|.+.+.+.
T Consensus 1 iiip~---yN~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~------------------------- 51 (211)
T cd04188 1 VVIPA---YNEE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKL------------------------- 51 (211)
T ss_pred CEEcc---cChH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHH-------------------------
Confidence 68999 9999 889999999998865 4445999999999999765422111
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCc-EEEEe
Q 004779 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL-LVYVS 255 (731)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~-l~yv~ 255 (731)
.+ ..|. ++++.
T Consensus 52 -------------------------~~-------------------------------------------~~~~~i~~i~ 63 (211)
T cd04188 52 -------------------------AR-------------------------------------------KNPALIRVLT 63 (211)
T ss_pred -------------------------HH-------------------------------------------hCCCcEEEEE
Confidence 00 0111 35555
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCC
Q 004779 256 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (731)
Q Consensus 256 R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~ 312 (731)
.++ ..||++|+|.|++. ++||+|+++|+|...+ |+.+.+++..+.++
T Consensus 64 ~~~-----n~G~~~a~~~g~~~----a~gd~i~~ld~D~~~~-~~~l~~l~~~~~~~ 110 (211)
T cd04188 64 LPK-----NRGKGGAVRAGMLA----ARGDYILFADADLATP-FEELEKLEEALKTS 110 (211)
T ss_pred ccc-----CCCcHHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhcc
Confidence 444 35799999999999 8999999999999987 99999999986543
No 55
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.51 E-value=7.4e-14 Score=142.91 Aligned_cols=150 Identities=17% Similarity=0.092 Sum_probs=91.0
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHH---HHhcCCCCCCcEEEEccCce
Q 004779 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM---CFHLDPKISSSLAFVQFPQK 326 (731)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v---~~f~D~~~~~~vg~VQ~Pq~ 326 (731)
++.++..++ +.|+++|+|.|++.+.. .++|+|+++|+|..++ |++|.+++ ..+. .+++++.+ +|+.
T Consensus 48 ~i~~i~~~~-----n~G~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~---~~~~~~~~-~~~~ 116 (237)
T cd02526 48 KIELIHLGE-----NLGIAKALNIGIKAALE-NGADYVLLFDQDSVPP-PDMVEKLLAYKILSD---KNSNIGAV-GPRI 116 (237)
T ss_pred cEEEEECCC-----ceehHHhhhHHHHHHHh-CCCCEEEEECCCCCcC-HhHHHHHHHHHHhhc---cCCCeEEE-eeeE
Confidence 366776655 35699999999998211 1349999999999987 99999985 3222 22356665 4554
Q ss_pred eccCCCCchHHHHHHH-HHHHHHHhhhh-cCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCC
Q 004779 327 FHNINKYDIYDGRFRS-AYCVQWQGMDG-LKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 404 (731)
Q Consensus 327 f~n~~~~d~~~~~~~~-f~~~i~~g~dg-~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 404 (731)
................ .+......... .......|+|+++||+++..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~------------------------------- 165 (237)
T cd02526 117 IDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEK------------------------------- 165 (237)
T ss_pred EcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHHH-------------------------------
Confidence 4322111100000000 00000001111 12234568889999999863
Q ss_pred CCCchhhHHHhhcccccceeeccccccccccccCCCc--cchHHHHHHHHhCCCEEEEeCCCCCeeEec
Q 004779 405 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV--SEDLFTGFILHCKGWTSTYLTPFRPQFLGT 471 (731)
Q Consensus 405 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sv--tED~~t~~rl~~~Gwrs~y~~~~~~~~~g~ 471 (731)
.+||+.... .||++.++|+..+||+..|++. +...-.
T Consensus 166 ----------------------------~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~--~~v~h~ 204 (237)
T cd02526 166 ----------------------------VGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPD--AVLKHE 204 (237)
T ss_pred ----------------------------hCCCCHHHcCccchHHHHHHHHHcCCcEEEEcC--eEEEec
Confidence 346665432 4899999999999999999985 444433
No 56
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.49 E-value=6e-14 Score=133.49 Aligned_cols=161 Identities=27% Similarity=0.332 Sum_probs=105.1
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (731)
|+||+ |||+ +.+.+|+.+++++.|+. .+|+|+|||+++.|.+.+.+..
T Consensus 1 Viip~---~n~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~~~-------------------------- 48 (180)
T cd06423 1 IIVPA---YNEE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEELA-------------------------- 48 (180)
T ss_pred Ceecc---cChH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHHHh--------------------------
Confidence 67999 9999 89999999999999965 8999999999996653221100
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccC
Q 004779 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (731)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 258 (731)
.+ ..+...++..++
T Consensus 49 -----------------------~~-------------------------------------------~~~~~~~~~~~~ 62 (180)
T cd06423 49 -----------------------AL-------------------------------------------YIRRVLVVRDKE 62 (180)
T ss_pred -----------------------cc-------------------------------------------ccceEEEEEecc
Confidence 00 001244554444
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHh-cCCCCCCcEEEEccCceeccCCCCchHH
Q 004779 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYDIYD 337 (731)
Q Consensus 259 ~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (731)
..+|+.|+|.+++. +++++|+++|+|..+. |++|.+++..+ .++ +++.|.......+... ..+.
T Consensus 63 -----~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~-~~~~ 127 (180)
T cd06423 63 -----NGGKAGALNAGLRH----AKGDIVVVLDADTILE-PDALKRLVVPFFADP----KVGAVQGRVRVRNGSE-NLLT 127 (180)
T ss_pred -----cCCchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHhccCC----CeeeEeeeEEEecCcC-ccee
Confidence 47899999999999 7999999999999997 99999995544 444 4777766554433210 1111
Q ss_pred HHHHHHH----HHHHHhhhhcCC-ccccceeEEEeccccc
Q 004779 338 GRFRSAY----CVQWQGMDGLKG-PVLSGTGYYIKRESLY 372 (731)
Q Consensus 338 ~~~~~f~----~~i~~g~dg~~~-~~~~Gtg~~~RR~aL~ 372 (731)
......+ .....+....+. ..+.|++.++||+++.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 167 (180)
T cd06423 128 RLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREALR 167 (180)
T ss_pred ccchheecceeeeeeehhheecceeecCchHHHHHHHHHH
Confidence 1111001 011111111222 3567888899999885
No 57
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.49 E-value=1.1e-12 Score=139.84 Aligned_cols=109 Identities=16% Similarity=0.262 Sum_probs=86.7
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCc
Q 004779 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (731)
Q Consensus 93 ~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (731)
..|.|+|+||| |||+ +.+.+||.|+++++||. .+|+|+|||+++ .+.+.+..
T Consensus 3 ~~p~VSVIip~---yN~~-~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~--~~~~~~~~-------------------- 54 (279)
T PRK10018 3 DNPLISIYMPT---WNRQ-QLAIRAIKSVLRQDYSN--WEMIIVDDCSTS--WEQLQQYV-------------------- 54 (279)
T ss_pred CCCEEEEEEEe---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCC--HHHHHHHH--------------------
Confidence 46899999999 9999 67789999999999997 999999999984 21111100
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEE
Q 004779 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (731)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~ 252 (731)
++ ...|++.
T Consensus 55 -----------------------------~~------------------------------------------~~~~ri~ 63 (279)
T PRK10018 55 -----------------------------TA------------------------------------------LNDPRIT 63 (279)
T ss_pred -----------------------------HH------------------------------------------cCCCCEE
Confidence 00 0113578
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc
Q 004779 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (731)
Q Consensus 253 yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~ 310 (731)
|+..++ +.|++.|+|.|++. ++||||+++|+|.... |+.|.+.+.++.
T Consensus 64 ~i~~~~-----n~G~~~a~N~gi~~----a~g~~I~~lDaDD~~~-p~~l~~~~~~~~ 111 (279)
T PRK10018 64 YIHNDI-----NSGACAVRNQAIML----AQGEYITGIDDDDEWT-PNRLSVFLAHKQ 111 (279)
T ss_pred EEECCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-ccHHHHHHHHHH
Confidence 886554 47899999999999 8999999999999988 999999988764
No 58
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.47 E-value=1.1e-12 Score=137.47 Aligned_cols=48 Identities=19% Similarity=0.129 Sum_probs=39.8
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCC-CCCCCeEEEEEcCCCCccchh
Q 004779 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALD-YPVDKLHVYLSDDGGSPITLH 146 (731)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~d-YP~~kl~v~v~DDg~~~~T~~ 146 (731)
|.|+|+||| |||+ +.+.+|+.|+.++. .+...++|+|+|||++|.|.+
T Consensus 1 ~~vSVIi~~---yN~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~ 49 (248)
T PRK10063 1 MLLSVITVA---FRNL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTRE 49 (248)
T ss_pred CeEEEEEEe---CCCH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHH
Confidence 679999999 9998 78999999998642 232349999999999998764
No 59
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.45 E-value=7.1e-14 Score=132.92 Aligned_cols=164 Identities=16% Similarity=0.064 Sum_probs=109.9
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccccc
Q 004779 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (731)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (731)
+|+||| |||+ +.+.+|+.|++.+.++. .+|+|+|||++|.|.+.+.+..+
T Consensus 1 Svvip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~~~~~~~~~~~------------------------ 50 (169)
T PF00535_consen 1 SVVIPT---YNEA-EYLERTLESLLKQTDPD--FEIIVVDDGSTDETEEILEEYAE------------------------ 50 (169)
T ss_dssp EEEEEE---SS-T-TTHHHHHHHHHHHSGCE--EEEEEEECS-SSSHHHHHHHHHC------------------------
T ss_pred CEEEEe---eCCH-HHHHHHHHHHhhccCCC--EEEEEeccccccccccccccccc------------------------
Confidence 689999 9996 89999999999996664 89999999999866432221100
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEecc
Q 004779 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (731)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~ 257 (731)
..+++.|+.++
T Consensus 51 ---------------------------------------------------------------------~~~~i~~i~~~ 61 (169)
T PF00535_consen 51 ---------------------------------------------------------------------SDPNIRYIRNP 61 (169)
T ss_dssp ---------------------------------------------------------------------CSTTEEEEEHC
T ss_pred ---------------------------------------------------------------------ccccccccccc
Confidence 11358899887
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHH
Q 004779 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 337 (731)
Q Consensus 258 k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 337 (731)
++ .++++++|.|++. ++++|++++|+|.++. |++|.+++..+.+.. ..+.+...+....+........
T Consensus 62 ~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~~-~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 129 (169)
T PF00535_consen 62 EN-----LGFSAARNRGIKH----AKGEYILFLDDDDIIS-PDWLEELVEALEKNP--PDVVIGSVIYIDDDNRYPDRRL 129 (169)
T ss_dssp CC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHCT--TEEEEEEEEEEECTTETEECCC
T ss_pred cc-----ccccccccccccc----cceeEEEEeCCCceEc-HHHHHHHHHHHHhCC--CcEEEEEEEEecCCcccccccc
Confidence 63 5899999999999 8999999999999998 899999999987632 2333333322222211111000
Q ss_pred H--HHHHHHHHHHHhhhhcCCccccceeEEEeccccc
Q 004779 338 G--RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLY 372 (731)
Q Consensus 338 ~--~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~ 372 (731)
. .....+..............++|+++++||++++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~ 166 (169)
T PF00535_consen 130 RFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFE 166 (169)
T ss_dssp TSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHH
T ss_pred chhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHH
Confidence 0 0011223334445556678889999999999985
No 60
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.40 E-value=6.3e-11 Score=129.41 Aligned_cols=129 Identities=18% Similarity=0.129 Sum_probs=91.4
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcC------CCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhc
Q 004779 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMAL------DYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRY 165 (731)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~------dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~ 165 (731)
+..|.|+|+||+ |||+ ..+.+++.++.++ ++|....+|+|+||||+|.|.+.+.+.++ ++
T Consensus 67 ~~~~~isVVIP~---yNe~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~----------~~ 132 (333)
T PTZ00260 67 DSDVDLSIVIPA---YNEE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWR----------QN 132 (333)
T ss_pred CCCeEEEEEEee---CCCH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHH----------hc
Confidence 457899999999 9999 6788888887653 24555699999999999988753322110 00
Q ss_pred CcccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccc
Q 004779 166 GIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADL 245 (731)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~ 245 (731)
.
T Consensus 133 ~------------------------------------------------------------------------------- 133 (333)
T PTZ00260 133 I------------------------------------------------------------------------------- 133 (333)
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccC
Q 004779 246 VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFP 324 (731)
Q Consensus 246 ~~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~P 324 (731)
..-+++.++..++ +.||++|+|.|++. +.||+|+++|+|...+ |+.+.+++..+.+-+ ++.++.|.+-
T Consensus 134 ~~~~~i~vi~~~~-----N~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~~-~~~l~~l~~~l~~~~-~~~~dvV~Gs 201 (333)
T PTZ00260 134 NPNIDIRLLSLLR-----NKGKGGAVRIGMLA----SRGKYILMVDADGATD-IDDFDKLEDIMLKIE-QNGLGIVFGS 201 (333)
T ss_pred CCCCcEEEEEcCC-----CCChHHHHHHHHHH----ccCCEEEEEeCCCCCC-HHHHHHHHHHHHHhh-ccCCceEEee
Confidence 0001356665544 46899999999999 8999999999999976 999988888775411 1135555553
No 61
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.40 E-value=3.1e-12 Score=125.57 Aligned_cols=164 Identities=15% Similarity=0.064 Sum_probs=108.4
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (731)
|+||+ |||+ +.+.+|+.++.++.|+....+|+|+|||+++.|.+.+.+.
T Consensus 1 iii~~---~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~--------------------------- 49 (185)
T cd04179 1 VVIPA---YNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIAREL--------------------------- 49 (185)
T ss_pred Ceecc---cChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHH---------------------------
Confidence 57999 9998 8899999999999996556999999999998664322111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccC
Q 004779 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (731)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 258 (731)
.+ ..|.+.++..++
T Consensus 50 -----------------------~~-------------------------------------------~~~~~~~~~~~~ 63 (185)
T cd04179 50 -----------------------AA-------------------------------------------RVPRVRVIRLSR 63 (185)
T ss_pred -----------------------HH-------------------------------------------hCCCeEEEEccC
Confidence 00 012345555554
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCch-HH
Q 004779 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI-YD 337 (731)
Q Consensus 259 ~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~-~~ 337 (731)
..+|++|+|.+++. +.||+++++|+|..+. |+.|.+++..+..+ +.++|+.+....+...... +.
T Consensus 64 -----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~ 129 (185)
T cd04179 64 -----NFGKGAAVRAGFKA----ARGDIVVTMDADLQHP-PEDIPKLLEKLLEG----GADVVIGSRFVRGGGAGMPLLR 129 (185)
T ss_pred -----CCCccHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhcc----CCcEEEEEeecCCCcccchHHH
Confidence 35799999999999 8899999999999986 99999999985543 2566767665544211111 11
Q ss_pred HHHHHHHHHHHHhhhhcCCccccceeEEEecccccc
Q 004779 338 GRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA 373 (731)
Q Consensus 338 ~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~ 373 (731)
+.....+........+.......|...++||+++..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 165 (185)
T cd04179 130 RLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEA 165 (185)
T ss_pred HHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHHHH
Confidence 111111111112222222333455666899999963
No 62
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.28 E-value=3.4e-11 Score=127.59 Aligned_cols=145 Identities=14% Similarity=-0.048 Sum_probs=91.7
Q ss_pred CcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceec
Q 004779 249 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 328 (731)
Q Consensus 249 P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~ 328 (731)
|++.|+..++ +.|.|+|+|.|++.+-. .++|+|+++|.|.+++ |+.+.+++..+..+ +.+++.|+ |..+.
T Consensus 45 ~~i~~i~~~~-----N~G~a~a~N~Gi~~a~~-~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~--~~~~~~~~-~~~~~ 114 (281)
T TIGR01556 45 QKIALIHLGD-----NQGIAGAQNQGLDASFR-RGVQGVLLLDQDSRPG-NAFLAAQWKLLSAE--NGQACALG-PRFFD 114 (281)
T ss_pred CCeEEEECCC-----CcchHHHHHHHHHHHHH-CCCCEEEEECCCCCCC-HHHHHHHHHHHHhc--CCceEEEC-CeEEc
Confidence 3577886554 46899999999988210 2689999999999998 99999999887532 22588875 55443
Q ss_pred cCCCCchHHH--HHHHHHHHH-HHhhhh-cCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCC
Q 004779 329 NINKYDIYDG--RFRSAYCVQ-WQGMDG-LKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 404 (731)
Q Consensus 329 n~~~~d~~~~--~~~~f~~~i-~~g~dg-~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 404 (731)
.. .+..++. ......... ...... ....+..++|+++||+++..
T Consensus 115 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~~------------------------------- 162 (281)
T TIGR01556 115 RG-TSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQR------------------------------- 162 (281)
T ss_pred CC-CcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHHH-------------------------------
Confidence 21 1111110 000000000 000011 11234567889999999852
Q ss_pred CCCchhhHHHhhcccccceeeccccccccccccCC--CccchHHHHHHHHhCCCEEEEeCC
Q 004779 405 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQ--SVSEDLFTGFILHCKGWTSTYLTP 463 (731)
Q Consensus 405 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~--svtED~~t~~rl~~~Gwrs~y~~~ 463 (731)
.+||+++ .=.||.+.++|+.++||++.++++
T Consensus 163 ----------------------------iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~ 195 (281)
T TIGR01556 163 ----------------------------LGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPD 195 (281)
T ss_pred ----------------------------hCCccHhhcccchHHHHHHHHHHCCCEEEEeCC
Confidence 2345443 124899999999999999999985
No 63
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.25 E-value=1e-10 Score=115.00 Aligned_cols=106 Identities=11% Similarity=0.073 Sum_probs=64.8
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceecc
Q 004779 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHN 329 (731)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n 329 (731)
++.++..++ +.+|++|+|.+++. +.+|+|+++|+|..+. |+.|.+++..+. ++ .++.+. .....+
T Consensus 56 ~i~~i~~~~-----n~G~~~a~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~-~~--~~~v~g--~~~~~~ 120 (181)
T cd04187 56 RVKVIRLSR-----NFGQQAALLAGLDH----ARGDAVITMDADLQDP-PELIPEMLAKWE-EG--YDVVYG--VRKNRK 120 (181)
T ss_pred CEEEEEecC-----CCCcHHHHHHHHHh----cCCCEEEEEeCCCCCC-HHHHHHHHHHHh-CC--CcEEEE--EecCCc
Confidence 466765544 46799999999999 8899999999999986 999999998743 32 233322 221111
Q ss_pred CCCCchHHHHHHHHHHHHHHhhhhcCCccccceeEEEecccccc
Q 004779 330 INKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA 373 (731)
Q Consensus 330 ~~~~d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~ 373 (731)
...........+........+..-+...|+..++||+++..
T Consensus 121 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 161 (181)
T cd04187 121 ---ESWLKRLTSKLFYRLINKLSGVDIPDNGGDFRLMDRKVVDA 161 (181)
T ss_pred ---chHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEcHHHHHH
Confidence 11111111111111122222333345567778999999975
No 64
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.20 E-value=2.8e-09 Score=116.14 Aligned_cols=109 Identities=17% Similarity=0.128 Sum_probs=81.2
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHc---CCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccC
Q 004779 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMA---LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (731)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~---~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (731)
.++++|+||+ |||+ +.+.+++.++.+ .-. ...+|+|+|||++|.|.+.+.+.++
T Consensus 5 ~~~vSVVIP~---yNE~-~~i~~~l~~l~~~~~~~~--~~~EIIvVDDgS~D~T~~il~~~~~----------------- 61 (325)
T PRK10714 5 IKKVSVVIPV---YNEQ-ESLPELIRRTTAACESLG--KEYEILLIDDGSSDNSAEMLVEAAQ----------------- 61 (325)
T ss_pred CCeEEEEEcc---cCch-hhHHHHHHHHHHHHHhCC--CCEEEEEEeCCCCCcHHHHHHHHHh-----------------
Confidence 4679999999 9999 777777776543 222 2489999999999988754333210
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCc
Q 004779 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (731)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~ 250 (731)
+ .-++
T Consensus 62 --------------------------------~-------------------------------------------~~~~ 66 (325)
T PRK10714 62 --------------------------------A-------------------------------------------PDSH 66 (325)
T ss_pred --------------------------------h-------------------------------------------cCCc
Confidence 0 0012
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc
Q 004779 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (731)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~ 310 (731)
++.+..++ +.||++|+|+|+++ ++||+++++|||...+ |+.+.+++..+.
T Consensus 67 v~~i~~~~-----n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~~-p~~i~~l~~~~~ 116 (325)
T PRK10714 67 IVAILLNR-----NYGQHSAIMAGFSH----VTGDLIITLDADLQNP-PEEIPRLVAKAD 116 (325)
T ss_pred EEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCCC-HHHHHHHHHHHH
Confidence 44443333 46899999999999 8999999999999977 999999998775
No 65
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.19 E-value=3.6e-10 Score=104.73 Aligned_cols=113 Identities=28% Similarity=0.272 Sum_probs=83.0
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCccccccc
Q 004779 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (731)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (731)
|+||+ +||+ ..+..|+.+++.++|+. .+++|+||++++.+.+.+.+..+
T Consensus 1 iii~~---~~~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~------------------------- 49 (156)
T cd00761 1 VIIPA---YNEE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEILEEYAK------------------------- 49 (156)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHHHHHHHh-------------------------
Confidence 57999 8897 88999999999999954 88999999998854432211100
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccC
Q 004779 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (731)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k 258 (731)
. .+...++.+++
T Consensus 50 ------------------------~--------------------------------------------~~~~~~~~~~~ 61 (156)
T cd00761 50 ------------------------K--------------------------------------------DPRVIRVINEE 61 (156)
T ss_pred ------------------------c--------------------------------------------CCCeEEEEecC
Confidence 0 00133444433
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHH-hcCCCCCCcEEEEccC
Q 004779 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF-HLDPKISSSLAFVQFP 324 (731)
Q Consensus 259 ~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~-f~D~~~~~~vg~VQ~P 324 (731)
+.+|++++|.+++. .++++++++|+|.++. |+++...+.. ..++ +.+.|+++
T Consensus 62 -----~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~~-~~~~~~~~~~~~~~~----~~~~v~~~ 114 (156)
T cd00761 62 -----NQGLAAARNAGLKA----ARGEYILFLDADDLLL-PDWLERLVAELLADP----EADAVGGP 114 (156)
T ss_pred -----CCChHHHHHHHHHH----hcCCEEEEECCCCccC-ccHHHHHHHHHhcCC----CceEEecc
Confidence 57899999999999 7899999999999987 8999887444 4443 47777665
No 66
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.18 E-value=1.3e-10 Score=125.40 Aligned_cols=124 Identities=19% Similarity=0.113 Sum_probs=88.5
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCC
Q 004779 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (731)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (731)
..-|+|+|+||+ |||+ +.+.+++.++.++.++....+|+|+||||+|.|.+.+.+ ++.
T Consensus 28 ~~~~~vSVVIPa---yNee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~--------------~~~---- 85 (306)
T PRK13915 28 KAGRTVSVVLPA---LNEE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAA--------------AGA---- 85 (306)
T ss_pred cCCCCEEEEEec---CCcH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHH--------------hcc----
Confidence 356899999999 9999 789999999998765322469999999999987643221 110
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcE
Q 004779 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (731)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l 251 (731)
++ + +..
T Consensus 86 -----------------------------------~v---------------------~------------------~~~ 91 (306)
T PRK13915 86 -----------------------------------RV---------------------V------------------SRE 91 (306)
T ss_pred -----------------------------------hh---------------------h------------------cch
Confidence 00 0 000
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc-CCCCCCcEEEEcc
Q 004779 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQF 323 (731)
Q Consensus 252 ~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~-D~~~~~~vg~VQ~ 323 (731)
..+.+ .+ .+.+|++|+|.++.. ++||+|+++|||....+|+++.+++..+. ||+ +++|.+
T Consensus 92 ~~~~~--~~--~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~----~~~V~g 152 (306)
T PRK13915 92 EILPE--LP--PRPGKGEALWRSLAA----TTGDIVVFVDADLINFDPMFVPGLLGPLLTDPG----VHLVKA 152 (306)
T ss_pred hhhhc--cc--cCCCHHHHHHHHHHh----cCCCEEEEEeCccccCCHHHHHHHHHHHHhCCC----ceEEEE
Confidence 00001 01 146899999999998 89999999999997334999999998886 654 677764
No 67
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.15 E-value=1.2e-09 Score=116.52 Aligned_cols=134 Identities=16% Similarity=0.150 Sum_probs=86.5
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHHHHH---
Q 004779 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR--- 341 (731)
Q Consensus 265 ~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~--- 341 (731)
-++|.|.|.|++. +++|+|+++|+|+++. |+++.+++.+..+-..+ .-+++-.|..+.+.+....+.....
T Consensus 74 f~~a~arN~g~~~----A~~d~l~flD~D~i~~-~~~i~~~~~~~~~l~~~-~~~~~~~p~~yl~~~~~~~~~~~~~~~~ 147 (281)
T PF10111_consen 74 FSRAKARNIGAKY----ARGDYLIFLDADCIPS-PDFIEKLLNHVKKLDKN-PNAFLVYPCLYLSEEGSEKFYSQFKNLW 147 (281)
T ss_pred cCHHHHHHHHHHH----cCCCEEEEEcCCeeeC-HHHHHHHHHHHHHHhcC-CCceEEEeeeeccchhhHHHhhcchhcc
Confidence 3899999999999 8999999999999998 99999999832111011 2345556766665432222221110
Q ss_pred --HHH-HHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhhcc
Q 004779 342 --SAY-CVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGV 418 (731)
Q Consensus 342 --~f~-~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (731)
.+. +......+.++....+|++.+++|+.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~--------------------------------------------- 182 (281)
T PF10111_consen 148 DHEFLESFISGKNSLWEFIAFASSCFLINREDFLE--------------------------------------------- 182 (281)
T ss_pred hHHHHHHHhhccccccccccccceEEEEEHHHHHH---------------------------------------------
Confidence 111 11111122333334466777899998753
Q ss_pred cccceeeccccccccccccCC---CccchHHHHHHHHhCCCEEEEeCC
Q 004779 419 LASCSYEHQTKWGEEVGILYQ---SVSEDLFTGFILHCKGWTSTYLTP 463 (731)
Q Consensus 419 v~~c~ye~~t~~g~~~G~~~~---svtED~~t~~rl~~~Gwrs~y~~~ 463 (731)
.|||++. ---||++.+.||...|.+..++++
T Consensus 183 --------------iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~ 216 (281)
T PF10111_consen 183 --------------IGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPD 216 (281)
T ss_pred --------------hCCCCccccCCCcchHHHHHHHHHcCCcEecChH
Confidence 4566643 236999999999999999887764
No 68
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.14 E-value=1.6e-09 Score=116.77 Aligned_cols=198 Identities=18% Similarity=0.169 Sum_probs=131.5
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcc
Q 004779 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (731)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~ 173 (731)
-|.+.++|+| ||-. +.+.+++.++.+++||.+ .++++|+|++|.|.+.+.+.
T Consensus 2 ~~~i~~iiv~---yn~~-~~l~~~l~~l~~~~~~~~--~iv~vDn~s~d~~~~~~~~~---------------------- 53 (305)
T COG1216 2 MPKISIIIVT---YNRG-EDLVECLASLAAQTYPDD--VIVVVDNGSTDGSLEALKAR---------------------- 53 (305)
T ss_pred CcceEEEEEe---cCCH-HHHHHHHHHHhcCCCCCc--EEEEccCCCCCCCHHHHHhh----------------------
Confidence 4789999999 9998 789999999999999983 45589999999765322110
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEE
Q 004779 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (731)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~y 253 (731)
..|++.+
T Consensus 54 -------------------------------------------------------------------------~~~~v~~ 60 (305)
T COG1216 54 -------------------------------------------------------------------------FFPNVRL 60 (305)
T ss_pred -------------------------------------------------------------------------cCCcEEE
Confidence 0246788
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCC-EEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCC
Q 004779 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSP-YILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINK 332 (731)
Q Consensus 254 v~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~-~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~ 332 (731)
+.-.+ +.|=||+.|.+++... ++++ ++++++-|+++. |++|.+++..+... +..+.|+.....++...
T Consensus 61 i~~~~-----NlG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~~-~~~l~~ll~~~~~~---~~~~~~~~~i~~~~~~~ 129 (305)
T COG1216 61 IENGE-----NLGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVVE-PDLLEELLKAAEED---PAAGVVGPLIRNYDESL 129 (305)
T ss_pred EEcCC-----CccchhhhhHHHHHHh--cCCCcEEEEEcCCeeeC-hhHHHHHHHHHHhC---CCCeEeeeeEecCCCCc
Confidence 86554 4678999999998832 3434 899999998886 99999999888632 25777755443332110
Q ss_pred -CchHHHHHHHHHHHH---H--------HhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcc
Q 004779 333 -YDIYDGRFRSAYCVQ---W--------QGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQ 400 (731)
Q Consensus 333 -~d~~~~~~~~f~~~i---~--------~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 400 (731)
.+..+.....+.... . ...+-..+ .++|+++++||+++..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~li~~~~~~~--------------------------- 181 (305)
T COG1216 130 YIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVVA-SLSGACLLIRREAFEK--------------------------- 181 (305)
T ss_pred chheeccccccccccceecccccccccccchhhhhh-hcceeeeEEcHHHHHH---------------------------
Confidence 010100000000000 0 00000000 4678888899998852
Q ss_pred cCCCCCCchhhHHHhhcccccceeeccccccccccccCC--CccchHHHHHHHHhCCCEEEEeCC
Q 004779 401 NNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQ--SVSEDLFTGFILHCKGWTSTYLTP 463 (731)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~--svtED~~t~~rl~~~Gwrs~y~~~ 463 (731)
.+||+.+ .-.||++.+.|+..+||++.|++.
T Consensus 182 --------------------------------vG~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~ 214 (305)
T COG1216 182 --------------------------------VGGFDERFFIYYEDVDLCLRARKAGYKIYYVPD 214 (305)
T ss_pred --------------------------------hCCCCcccceeehHHHHHHHHHHcCCeEEEeec
Confidence 3455543 567999999999999999999986
No 69
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.12 E-value=4.9e-10 Score=131.65 Aligned_cols=166 Identities=19% Similarity=0.223 Sum_probs=111.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc-CCCCCCcEEEEccCceeccCCCCch---HHHHH
Q 004779 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDI---YDGRF 340 (731)
Q Consensus 265 ~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~d~---~~~~~ 340 (731)
+.|-=.+|.+..... .+=++|+.+|+|+.+. |+++.+++.-|. || +||-+.+ +..|. .+. +.++.
T Consensus 424 ~~~r~~~y~~~~~L~--~~v~~il~vD~dT~~~-P~ai~~lv~~f~~dp----~VggaCG--~I~~~--~~~w~v~~Q~F 492 (862)
T KOG2571|consen 424 NQHRWVMYTAFKALM--PSVDYILVVDADTRLD-PDALYHLVKVFDEDP----QVGGACG--RILNK--GGSWVVAYQNF 492 (862)
T ss_pred HHHHHHHHHHHHHhc--CcceEEEEecCCCccC-cHHHHHHHHHhccCc----ccceecc--ccccC--CCceEEeHHHH
Confidence 345555666666533 4557999999999987 999999999886 66 4777766 33332 222 22222
Q ss_pred HHHH-HHHHHhhhhcCCcccc--ceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCchhhHHHhhc
Q 004779 341 RSAY-CVQWQGMDGLKGPVLS--GTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETG 417 (731)
Q Consensus 341 ~~f~-~~i~~g~dg~~~~~~~--Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 417 (731)
+... ...+++-+..-|-+.| |.-++||-+||.+... +..+|..
T Consensus 493 EY~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~~----~~~y~~~------------------------------ 538 (862)
T KOG2571|consen 493 EYAISHNLQKATESVFGCVSCLPGCFSLYRASALMDQFV----EYFYGEK------------------------------ 538 (862)
T ss_pred HHHHHHHHHHhhhhhceeEEecCchhHHHHHHHHhcchH----Hhhhchh------------------------------
Confidence 2221 2345566655555444 4445699999986211 1111110
Q ss_pred ccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhccc
Q 004779 418 VLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (731)
Q Consensus 418 ~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 489 (731)
.-|..-|..+ +..||-.+..++..+||+.-||.. +.+...+|+++.+++.||+||..|
T Consensus 539 -----------~~~~~~~~~~-~~geDR~L~~~llskgy~l~Y~a~--s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 539 -----------FSGPRHGIQY-SLGEDRWLCTLLLSKGYRLKYVAA--SDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred -----------hcCccccccc-ccchhHHHHHHHHhccceeeeecc--ccccccCcHhHHHHHHHhhhhccc
Confidence 0000113333 489999999999999999999985 889999999999999999999999
No 70
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.83 E-value=3e-08 Score=94.64 Aligned_cols=47 Identities=23% Similarity=0.292 Sum_probs=43.7
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchh
Q 004779 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLH 146 (731)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~ 146 (731)
.|.++|+||| |||+ ..+.++|.|++++.|+. .+|+|+|||++|.|.+
T Consensus 2 ~~~~siiip~---~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~ 48 (291)
T COG0463 2 MPKVSVVIPT---YNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTE 48 (291)
T ss_pred CccEEEEEec---cchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHH
Confidence 4889999999 9999 99999999999999998 7899999999998764
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.81 E-value=3.6e-08 Score=101.56 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=39.3
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCC
Q 004779 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (731)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~ 312 (731)
..+++.+.|.|+.. +.+++|+++|+|..+. |+.+.++...+.++
T Consensus 56 ~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~~-~~~~~~l~~~~~~~ 99 (229)
T cd02511 56 WDGFGAQRNFALEL----ATNDWVLSLDADERLT-PELADEILALLATD 99 (229)
T ss_pred CCChHHHHHHHHHh----CCCCEEEEEeCCcCcC-HHHHHHHHHHHhCC
Confidence 46799999999999 8999999999999987 99999999887653
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.62 E-value=6.9e-08 Score=103.29 Aligned_cols=225 Identities=17% Similarity=0.205 Sum_probs=148.4
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCC
Q 004779 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (731)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (731)
..+|.|+|+-|--| ..| ...+-+++-...+|| |+|...+=+.+.| +|.+..+
T Consensus 82 ~~LPgVSiikPl~G-~d~---nl~~Nlesffts~Y~--~~ElLfcv~s~eD-------pAi~vv~--------------- 133 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKG-VDP---NLYHNLESFFTSQYH--KYELLFCVESSED-------PAIEVVE--------------- 133 (431)
T ss_pred CCCCCceEEeeccc-CCc---hhHHhHHHHHhhccC--ceEEEEEEccCCC-------cHHHHHH---------------
Confidence 36899999999966 443 366889999999999 5999988776666 2322110
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcE
Q 004779 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (731)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l 251 (731)
++-++| |++ + .-
T Consensus 134 ------------------------~Ll~ky----------------------p~V-d---------------------Ak 145 (431)
T KOG2547|consen 134 ------------------------RLLKKY----------------------PNV-D---------------------AK 145 (431)
T ss_pred ------------------------HHHhhC----------------------CCc-c---------------------eE
Confidence 111122 110 0 12
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEE-ccCceeccC
Q 004779 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV-QFPQKFHNI 330 (731)
Q Consensus 252 ~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~V-Q~Pq~f~n~ 330 (731)
.++.-++- | -+.|-.|+=-|.+. +..|+|++.|.|-... ||.+.++..-|+.++ ++|+| |+|-.++-.
T Consensus 146 lf~gG~~v-g--~npKInN~mpgy~~----a~ydlvlisDsgI~m~-pdtildm~t~M~she---kmalvtq~py~~dr~ 214 (431)
T KOG2547|consen 146 LFFGGEKV-G--LNPKINNMMPGYRA----AKYDLVLISDSGIFMK-PDTILDMATTMMSHE---KMALVTQTPYCKDRQ 214 (431)
T ss_pred EEEccccc-c--cChhhhccCHHHHH----hcCCEEEEecCCeeec-CchHHHHHHhhhccc---ceeeecCCceeeccc
Confidence 34444442 2 45688888888888 8999999999999987 999999998888665 79988 555444321
Q ss_pred CCCchHHHHHHHHHHHHHHhhhhc-----CCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCC
Q 004779 331 NKYDIYDGRFRSAYCVQWQGMDGL-----KGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANG 405 (731)
Q Consensus 331 ~~~d~~~~~~~~f~~~i~~g~dg~-----~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 405 (731)
++...-++ ++|...+ ++--+ +-.+.+|-.|+.|+++|+.
T Consensus 215 --Gf~atle~-~~fgTsh-~r~yl~~n~~~~~c~tgms~~mrK~~ld~-------------------------------- 258 (431)
T KOG2547|consen 215 --GFDATLEQ-VYFGTSH-PRIYLSGNVLGFNCSTGMSSMMRKEALDE-------------------------------- 258 (431)
T ss_pred --cchhhhhh-eeeccCC-ceEEEccccccccccccHHHHHHHHHHHH--------------------------------
Confidence 11111111 2333222 22111 2223466777889998863
Q ss_pred CCchhhHHHhhcccccceeecccccccccccc--CCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhh
Q 004779 406 ENFSNVLQEETGVLASCSYEHQTKWGEEVGIL--YQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQG 483 (731)
Q Consensus 406 ~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~--~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr 483 (731)
.+|+. .+.+.||...+-.+.++||++.+... ++-...+-.+...+..|-
T Consensus 259 ---------------------------~ggi~~f~~yLaedyFaaksllSRG~ksaist~--palQnSas~~mssf~~Ri 309 (431)
T KOG2547|consen 259 ---------------------------CGGISAFGGYLAEDYFAAKSLLSRGWKSAISTH--PALQNSASVTMSSFLDRI 309 (431)
T ss_pred ---------------------------hccHHHHHHHHHHHHHHHHHHHhhhhhhhhccc--chhhhhhhhHHHHHHHHH
Confidence 33322 24789999999999999999999874 555555667788888888
Q ss_pred hhhcc
Q 004779 484 TRWGS 488 (731)
Q Consensus 484 ~RWa~ 488 (731)
.||..
T Consensus 310 ~rwvk 314 (431)
T KOG2547|consen 310 IRWVK 314 (431)
T ss_pred HHhhh
Confidence 88864
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.15 E-value=2e-05 Score=77.56 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=67.2
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEccCceecc
Q 004779 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHN 329 (731)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n 329 (731)
++....|.+. -+=.-|.-+++.+ +.|+|+++.|||---+ |.++-+.+....+ .+..+|-+- +|..
T Consensus 64 ~i~l~pR~~k-----lGLgtAy~hgl~~----a~g~fiviMDaDlsHh-Pk~ipe~i~lq~~----~~~div~GT-RYa~ 128 (238)
T KOG2978|consen 64 NILLKPRTKK-----LGLGTAYIHGLKH----ATGDFIVIMDADLSHH-PKFIPEFIRLQKE----GNYDIVLGT-RYAG 128 (238)
T ss_pred cEEEEeccCc-----ccchHHHHhhhhh----ccCCeEEEEeCccCCC-chhHHHHHHHhhc----cCcceeeee-eEcC
Confidence 5777777763 4567788899999 9999999999998755 9998888775543 245666543 3332
Q ss_pred CCCCchHHHHHHHHHHHHHHhhhh-------cCCccccceeEEEeccccc
Q 004779 330 INKYDIYDGRFRSAYCVQWQGMDG-------LKGPVLSGTGYYIKRESLY 372 (731)
Q Consensus 330 ~~~~d~~~~~~~~f~~~i~~g~dg-------~~~~~~~Gtg~~~RR~aL~ 372 (731)
. ...++ +.+.-++|-+|.+- .+..-.+|+--++|++.|.
T Consensus 129 ~--ggV~g--W~mkRk~IS~gAn~la~~ll~~~~sdltGsFrLykk~vl~ 174 (238)
T KOG2978|consen 129 G--GGVYG--WDMKRKIISRGANFLARILLNPGVSDLTGSFRLYKKEVLE 174 (238)
T ss_pred C--Cceec--chhhHHHHhhhhHHHHHHhccCCCccCcceeeeehHHHHH
Confidence 1 12222 22222344444332 2344568888899999885
No 74
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=98.04 E-value=2.7e-05 Score=81.25 Aligned_cols=111 Identities=21% Similarity=0.154 Sum_probs=77.1
Q ss_pred ceEEEEecCCCCCCch---HHHHHHHHHHHcCCCCC---CCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCccc
Q 004779 96 AIDVFICTADPEKEPA---IGVMNTVLSAMALDYPV---DKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKT 169 (731)
Q Consensus 96 ~VdV~I~t~~pynEp~---~~v~~Tv~s~l~~dYP~---~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~ 169 (731)
..+|+||+ |||+- .++.+|+..+. -.|-. =+.+|.|+|||+.|.|.+.. +.||+|+|.+
T Consensus 68 ~lsVIVpa---ynE~~ri~~mldeav~~le-~ry~~~~~F~~eiiVvddgs~d~T~~~a----------~k~s~K~~~d- 132 (323)
T KOG2977|consen 68 YLSVIVPA---YNEEGRIGAMLDEAVDYLE-KRYLSDKSFTYEIIVVDDGSTDSTVEVA----------LKFSRKLGDD- 132 (323)
T ss_pred eeEEEEec---CCcccchHHHHHHHHHHHH-HHhccCCCCceeEEEeCCCCchhHHHHH----------HHHHHHcCcc-
Confidence 68999999 99982 23344444332 34443 37899999999999887532 2366676631
Q ss_pred CCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCC
Q 004779 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP 249 (731)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P 249 (731)
T Consensus 133 -------------------------------------------------------------------------------- 132 (323)
T KOG2977|consen 133 -------------------------------------------------------------------------------- 132 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCC--CCCChHHHHHHHHHhc
Q 004779 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM--YCNDPTSARQAMCFHL 310 (731)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~--~~~~p~~l~~~v~~f~ 310 (731)
+++.+.-.+ +.+|.||..-++-+ +.|+++++.|||- ...|-+.|.+++.--.
T Consensus 133 ~irV~~l~~-----nrgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 133 NIRVIKLKK-----NRGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred eEEEeehhc-----cCCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 245554434 46899999999988 8999999999994 3444567777776444
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=97.85 E-value=0.00018 Score=78.58 Aligned_cols=43 Identities=21% Similarity=0.279 Sum_probs=37.0
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCcc
Q 004779 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (731)
Q Consensus 97 VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~ 143 (731)
+-|+|.| ||-| +.+++||.+++++.+-.+..+|+|++||+++.
T Consensus 2 ~PVlv~a---yNRp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~ 44 (334)
T cd02514 2 IPVLVIA---CNRP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEE 44 (334)
T ss_pred cCEEEEe---cCCH-HHHHHHHHHHHhccccCCCceEEEEeCCCchH
Confidence 4588999 9998 89999999999987445678999999999873
No 76
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=96.70 E-value=0.026 Score=67.56 Aligned_cols=196 Identities=18% Similarity=0.139 Sum_probs=113.7
Q ss_pred ccCCCCCC--CCChHHHHHHHHHhcCCCCCCCEEEEeCC--CCCCCChHHH--HHHHHHhcCCC--------------CC
Q 004779 256 REKRPEHL--HHFKAGALNVLLRVSGVISNSPYILGLDC--DMYCNDPTSA--RQAMCFHLDPK--------------IS 315 (731)
Q Consensus 256 R~k~p~~~--~~~KAGaLN~~l~~s~~~t~g~~il~lDa--D~~~~~p~~l--~~~v~~f~D~~--------------~~ 315 (731)
|-|=||.+ ..||.-|-|+|+=. +.||++-.+|+ |.+.+ +.| |.++.=|.+.+ ..
T Consensus 263 ri~LpG~pilGeGK~eNQNhaiiF----~rGe~lQ~IDmNQDnYle--E~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~ 336 (817)
T PF02364_consen 263 RIKLPGNPILGEGKPENQNHAIIF----TRGEYLQTIDMNQDNYLE--EALKMRNLLEEFEEMHGDSSSPYIPGIEEEGK 336 (817)
T ss_pred EEECCCCCcCCCCCccccceeEEE----EccccccccccchhhhHH--HHHHHHHHHHHHHhcCCCCCCCCCCCccccCC
Confidence 44556655 47899999999988 99999999999 45543 332 45555554321 13
Q ss_pred CcEEEEccCceeccCCCC---chHHHHHHHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhh
Q 004779 316 SSLAFVQFPQKFHNINKY---DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLIN 392 (731)
Q Consensus 316 ~~vg~VQ~Pq~f~n~~~~---d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~ 392 (731)
+.++.|-++-+....+-+ |-.+.+-..|=-.-|+-+...++-+.-|.==++.|--..
T Consensus 337 ~~~aIlG~RE~IFs~~vg~L~~~aa~qE~~F~Tl~qR~la~p~~rlHYGHPD~~n~~f~~-------------------- 396 (817)
T PF02364_consen 337 RPVAILGFREHIFSENVGSLGDFAAGQEQSFGTLFQRTLANPLVRLHYGHPDVFNRIFMT-------------------- 396 (817)
T ss_pred CCceEecccceEecCCcchHHHHhhhhhHHHHHHHHHHHhcchhhccCCCchhhhhhhee--------------------
Confidence 567888777765543221 333333333333444444433322222222222222111
Q ss_pred hhhhhhcccCCCCCCchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEecc
Q 004779 393 SLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTS 472 (731)
Q Consensus 393 s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~a 472 (731)
.+|+++-+ =.+-+++||+..|+....+|-++.+|+ -..+|-.
T Consensus 397 -TRGGvSKA----------------------------------sk~lhLsEDIfaG~n~~lRGG~i~h~e---y~qcGKG 438 (817)
T PF02364_consen 397 -TRGGVSKA----------------------------------SKGLHLSEDIFAGMNATLRGGRIKHCE---YIQCGKG 438 (817)
T ss_pred -ccCccchH----------------------------------hhcccccHHHHHHHHHHhcCCceeehh---hhhcccc
Confidence 01111100 012389999999999999999999986 4555554
Q ss_pred CC-ChHHHhhhhhhhccccccccccccCCcccCCCCCCHhHHHHhH
Q 004779 473 TT-NLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYG 517 (731)
Q Consensus 473 P~-~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~ 517 (731)
-+ .+.+-..=-.+-+.|+=|..+||.---+. .+|.+..-+.+.
T Consensus 439 RD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrLg--~~ld~~R~LSfy 482 (817)
T PF02364_consen 439 RDVGFNSILNFETKIASGMGEQMLSREYYRLG--TRLDFFRFLSFY 482 (817)
T ss_pred cccCchhhhhhHhHhcCCccchhhhHHHHHhh--ccCCHHHHHHHH
Confidence 43 45555555677899999999887422222 577776666533
No 77
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.04 E-value=0.023 Score=62.00 Aligned_cols=49 Identities=24% Similarity=0.185 Sum_probs=41.1
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCc
Q 004779 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSP 142 (731)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~ 142 (731)
++++|+++|+|.- +||.-..+++||.|++.-.=|+---+|+++||=++.
T Consensus 151 pe~Lpt~SVviVF---HNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 151 PENLPTSSVVIVF---HNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred cccCCcceEEEEE---ecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 5789999999999 999999999999999976644435678888887764
No 78
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=95.30 E-value=0.062 Score=47.56 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=28.6
Q ss_pred CCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchh
Q 004779 107 EKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLH 146 (731)
Q Consensus 107 ynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~ 146 (731)
+||+ ..+...|..-+++.+- ++||.|||++|.|.+
T Consensus 1 rne~-~~L~~wl~~~~~lG~d----~i~i~d~~s~D~t~~ 35 (97)
T PF13704_consen 1 RNEA-DYLPEWLAHHLALGVD----HIYIYDDGSTDGTRE 35 (97)
T ss_pred CChH-HHHHHHHHHHHHcCCC----EEEEEECCCCccHHH
Confidence 4787 7789999998888764 499999999997653
No 79
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.20 E-value=0.038 Score=60.51 Aligned_cols=49 Identities=22% Similarity=0.179 Sum_probs=43.5
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCcc
Q 004779 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (731)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~ 143 (731)
.++|+-+|+|+- +||....+.+||.|+++..=++=-.+|+++||++.|.
T Consensus 121 ~dlp~TsviITf---HNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dp 169 (559)
T KOG3738|consen 121 VDLPPTSVIITF---HNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDP 169 (559)
T ss_pred cCCCCceEEEEe---ccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCCh
Confidence 468999999999 9999999999999999987444467999999999984
No 80
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.67 E-value=0.026 Score=65.61 Aligned_cols=48 Identities=29% Similarity=0.280 Sum_probs=41.8
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCc
Q 004779 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSP 142 (731)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~ 142 (731)
+.+|+++|+|+- +||...++.+||.|+.+..=|.--.+|+++||+++.
T Consensus 139 ~~Lp~~Svii~f---~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~ 186 (578)
T KOG3736|consen 139 DKLPTTSVIIIF---HNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDR 186 (578)
T ss_pred cccCCCceEEEE---ecCCCcchhheEEeehccCChhHeEEEEEeecCcch
Confidence 458999999999 999999999999999887744446789999999975
No 81
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=93.05 E-value=0.29 Score=50.48 Aligned_cols=49 Identities=16% Similarity=0.275 Sum_probs=38.9
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHh-cCCCCCCcEEEE
Q 004779 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFV 321 (731)
Q Consensus 265 ~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f-~D~~~~~~vg~V 321 (731)
..-|-+.|.|++. ++++|++.+.-|..+.+++++.+++..| .||+ +|.+
T Consensus 40 ~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~----~G~i 89 (217)
T PF13712_consen 40 KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDPN----IGMI 89 (217)
T ss_dssp S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-TT----EEEE
T ss_pred cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCC----ccEE
Confidence 4578899999999 9999999999999988899999999999 7774 6555
No 82
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=89.87 E-value=6 Score=50.11 Aligned_cols=84 Identities=23% Similarity=0.260 Sum_probs=51.2
Q ss_pred CccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCC-ChHHHhhhhhhhccccccccccccCCcccCCCCCCHhHHHH-hH
Q 004779 440 SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT-NLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMC-YG 517 (731)
Q Consensus 440 svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~-~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~-y~ 517 (731)
.++||+..||.-..+|-++.+|+ -...|-.-+ .+.+-..=-..-+.|+=|..+||.-=-+ | .++.+-.-|. |.
T Consensus 1173 nlsEDIfAG~n~tlRgG~itH~E---YiQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrL-G-~~ldffRmLSfyf 1247 (1679)
T KOG0916|consen 1173 NLSEDIFAGFNATLRGGNITHHE---YIQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRL-G-TQLDFFRMLSFYF 1247 (1679)
T ss_pred ccchHhhhhhhHHhhCCCcccce---eeecccccccCcchhhhhhhhhcCCCcchhhhHHHHHh-c-ccccHHHHHHHHh
Confidence 78999999999999999998875 334443222 2333333345678999988888641112 2 4666655554 43
Q ss_pred hHhHhhHHhHHH
Q 004779 518 ELSFFPLLYCLP 529 (731)
Q Consensus 518 ~~~~~~~l~~~~ 529 (731)
...-+. ++.+.
T Consensus 1248 tt~GF~-~n~m~ 1258 (1679)
T KOG0916|consen 1248 TTVGFY-FNNMF 1258 (1679)
T ss_pred ccccHH-HHhHH
Confidence 332333 55554
No 83
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=88.82 E-value=1.4 Score=49.87 Aligned_cols=48 Identities=25% Similarity=0.378 Sum_probs=30.2
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCC-CCCeEEEEEcCCCCccc
Q 004779 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYP-VDKLHVYLSDDGGSPIT 144 (731)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP-~~kl~v~v~DDg~~~~T 144 (731)
...|.+-|+|-+ ||-| .-+.+||.++++.. | +++..|+|+.||+.+.|
T Consensus 90 ~~~~~~pVlV~A---cNRp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~ 138 (434)
T PF03071_consen 90 NKEPVIPVLVFA---CNRP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEV 138 (434)
T ss_dssp -------EEEEE---SS-T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHH
T ss_pred cCCCcceEEEEe---cCCc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHH
Confidence 456778888888 7888 78999999999988 6 46889999999998743
No 84
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=86.38 E-value=8.4 Score=39.96 Aligned_cols=53 Identities=13% Similarity=-0.187 Sum_probs=35.9
Q ss_pred cchHHHHHHHHhCCCEEEEeCCCCC----e------eEeccCCChHHHhhhhhhhcccccccc
Q 004779 442 SEDLFTGFILHCKGWTSTYLTPFRP----Q------FLGTSTTNLNDLLIQGTRWGSGLTDVG 494 (731)
Q Consensus 442 tED~~t~~rl~~~Gwrs~y~~~~~~----~------~~g~aP~~l~~~~~Qr~RWa~G~~qi~ 494 (731)
.||-+.+.||..+|.+.......-. + -....|+-+.....++.||+...+..+
T Consensus 138 gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 138 GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 5999999999999988665442100 0 022345556666778889988887655
No 85
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=85.66 E-value=15 Score=39.30 Aligned_cols=56 Identities=13% Similarity=0.096 Sum_probs=40.4
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCC--ccchhhHHHH
Q 004779 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGS--PITLHGMREA 151 (731)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~--~~T~~~l~Ea 151 (731)
.+-|+|=|+.|-.| -. ..+.+=...+.+++||++++++-++-.-++ +.|.+.|.++
T Consensus 22 ~~~e~VLILtplrn---a~-~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~ 79 (269)
T PF03452_consen 22 RNKESVLILTPLRN---AA-SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAA 79 (269)
T ss_pred ccCCeEEEEEecCC---ch-HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHH
Confidence 45688999998843 32 568888999999999999999955444444 6666655544
No 86
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=85.53 E-value=13 Score=39.41 Aligned_cols=81 Identities=20% Similarity=0.187 Sum_probs=41.7
Q ss_pred CCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcE-EEEccCce
Q 004779 248 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSL-AFVQFPQK 326 (731)
Q Consensus 248 ~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~v-g~VQ~Pq~ 326 (731)
+|++.|++-.. |. +-..-+---|+|...|-.-.++.+|+++|+|.+.. .|-..+.+..-.--+...+| |+.=-|..
T Consensus 61 ~~~~~yl~~~s-~~-~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S-~dnF~k~l~~~~ikk~~tnI~a~~vlPV~ 137 (346)
T COG4092 61 MPRVLYLDFGS-PE-PFASETICANNGADYSHEKCESNLVLFLDVDCFGS-SDNFAKMLSIATIKKMRTNIDAPLVLPVY 137 (346)
T ss_pred ccceEEEecCC-Cc-cccchhhhhhccchhhhccccccEEEEEecccccc-HHHHHHHHHHHHHHHHHhccCcceeeeee
Confidence 45677876422 11 11111333455555433335799999999999987 44433433221100011134 55556777
Q ss_pred eccCC
Q 004779 327 FHNIN 331 (731)
Q Consensus 327 f~n~~ 331 (731)
+-|-.
T Consensus 138 ~LNk~ 142 (346)
T COG4092 138 HLNKA 142 (346)
T ss_pred ecchh
Confidence 77653
No 87
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=80.12 E-value=6 Score=43.60 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=31.1
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHh
Q 004779 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (731)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f 309 (731)
+.||+-.|=-++-... +...+||-++|||.+. |.++.+-+.-|
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~y 184 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIY 184 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHH
Confidence 5789888877764421 1467999999999997 57777755433
No 88
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=78.10 E-value=20 Score=39.52 Aligned_cols=41 Identities=17% Similarity=0.180 Sum_probs=30.2
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHH
Q 004779 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (731)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~ 307 (731)
+.||+-.|=-++-... +...+||-++|||.+. |.++.+-+.
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk 181 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVK 181 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHH
Confidence 5789888877764421 1467999999999997 577776554
No 89
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=77.21 E-value=4.1 Score=44.79 Aligned_cols=40 Identities=15% Similarity=0.226 Sum_probs=26.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHH
Q 004779 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM 306 (731)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v 306 (731)
++||+-.|=-++-.+. +...+||-++|||.+. |.++.+-+
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYv 180 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYV 180 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHH
Confidence 4789998888764421 1567999999999996 78887644
No 90
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=67.79 E-value=40 Score=40.68 Aligned_cols=42 Identities=19% Similarity=0.163 Sum_probs=31.0
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHH
Q 004779 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF 308 (731)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~ 308 (731)
+.||+-.|=-++-... +...+||-++|||.+. |.++.+-+.-
T Consensus 146 r~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~ 187 (694)
T PRK14502 146 RSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKH 187 (694)
T ss_pred ecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHH
Confidence 5789988877764422 2578999999999997 5777765543
No 91
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=64.81 E-value=57 Score=32.33 Aligned_cols=37 Identities=27% Similarity=0.328 Sum_probs=28.7
Q ss_pred CCCchHHHHHHHHHHHc-----------CCCCCC---CeEEEEEcCCCCcc
Q 004779 107 EKEPAIGVMNTVLSAMA-----------LDYPVD---KLHVYLSDDGGSPI 143 (731)
Q Consensus 107 ynEp~~~v~~Tv~s~l~-----------~dYP~~---kl~v~v~DDg~~~~ 143 (731)
|||+.....+|+.+++. -.+..| |+-|-|+-||....
T Consensus 2 YNEd~~ll~rTL~gv~~Ni~~l~~r~~s~~wG~d~WkkiVVcIv~DGr~ki 52 (163)
T PF01644_consen 2 YNEDEILLARTLHGVMKNIAHLCSRKRSKTWGKDAWKKIVVCIVSDGRAKI 52 (163)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCcCCcCCCCCCcEEEEEEEecCcccC
Confidence 99999999999999764 123322 68888899999864
No 92
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=60.78 E-value=11 Score=41.12 Aligned_cols=45 Identities=27% Similarity=0.284 Sum_probs=32.7
Q ss_pred HHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEE
Q 004779 272 NVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV 321 (731)
Q Consensus 272 N~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~V 321 (731)
|.|+.. +..++|+++|+|++|. +++-+....+........+.++|
T Consensus 120 NvAr~~----a~T~~v~~~DvD~~ps-~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 120 NVARSG----ARTDYVFLLDVDFLPS-PGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHh----cCcceEEEecceeeeC-cchHHHHHHHhhhhccCCceEEE
Confidence 677777 8999999999999987 77766666554322234567777
No 93
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=54.13 E-value=32 Score=38.67 Aligned_cols=40 Identities=13% Similarity=0.006 Sum_probs=30.4
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc
Q 004779 267 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (731)
Q Consensus 267 KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~ 310 (731)
....+-+|++. .+.+++++.|||+=.-+++.+++++..+.
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 46678888877 45599999999965445899988887654
No 94
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=50.78 E-value=1.5e+02 Score=34.56 Aligned_cols=49 Identities=14% Similarity=0.139 Sum_probs=37.4
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHH
Q 004779 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM 306 (731)
Q Consensus 250 ~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v 306 (731)
++.++..... .-.++.+|+.+++.. .+.++++++|.|+..+ +++|.+.=
T Consensus 315 ~i~~i~~~~~----~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f~-~~fL~rcR 363 (499)
T PF05679_consen 315 RIKWISVKTG----EFSRGAALDVGAKKF---PPDSLLFFCDVDMVFT-SDFLNRCR 363 (499)
T ss_pred ceEEEEecCC----CccHHHHHHhhcccC---CCCcEEEEEeCCcccC-HHHHHHHH
Confidence 3667765411 456999999999863 4567999999999998 99997643
No 95
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=47.37 E-value=16 Score=31.52 Aligned_cols=22 Identities=18% Similarity=-0.117 Sum_probs=15.4
Q ss_pred cchHHHHHHHHhCCCEEEEeCC
Q 004779 442 SEDLFTGFILHCKGWTSTYLTP 463 (731)
Q Consensus 442 tED~~t~~rl~~~Gwrs~y~~~ 463 (731)
-||.+.+.|+..+|.+....+.
T Consensus 46 ~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 46 GEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp SHHHHHHHHHHHTT---B-SST
T ss_pred ccHHHHHHHHHHcCCeEEecCC
Confidence 3999999999999998776543
No 96
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=45.62 E-value=3.2e+02 Score=28.62 Aligned_cols=55 Identities=13% Similarity=0.019 Sum_probs=34.2
Q ss_pred CCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEe--CCCCCCCChHHHHHHHHHhc
Q 004779 248 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGL--DCDMYCNDPTSARQAMCFHL 310 (731)
Q Consensus 248 ~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~l--DaD~~~~~p~~l~~~v~~f~ 310 (731)
+|.++.+.++. +....++..+++.... ..+++++.+ |.|--+. .|+++++-.+..
T Consensus 84 ~p~~~i~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~RLDdDDAl~-~dFV~rlr~~a~ 140 (234)
T PF11316_consen 84 YPQFRIVFRPP------GPHRDAMRRAINAARR-DGADPVLQFRLDDDDALH-RDFVARLRRAAA 140 (234)
T ss_pred CCCcEEEecCC------chHHHHHHHHHhhhcc-CCCCEEEEEEECCcchhh-HHHHHHHHHHHH
Confidence 45455555543 2355677777643211 345655555 9988777 899998888774
No 97
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=42.27 E-value=2.3e+02 Score=29.09 Aligned_cols=59 Identities=7% Similarity=-0.031 Sum_probs=39.9
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCCCCCCcEEEEcc
Q 004779 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQF 323 (731)
Q Consensus 265 ~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~~~~~vg~VQ~ 323 (731)
-+....+.+++.......+.+.|++++||+=.-+++.+++++..|.+.+.+.-+..+..
T Consensus 76 ~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~~ 134 (222)
T TIGR03584 76 TGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTSF 134 (222)
T ss_pred CCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeecc
Confidence 44566677777652111246899999999887779999999988865333444555553
No 98
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism]
Probab=38.02 E-value=1.2e+02 Score=34.11 Aligned_cols=67 Identities=12% Similarity=0.167 Sum_probs=43.7
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCc
Q 004779 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (731)
Q Consensus 93 ~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (731)
.-|+|+.+-|+ .|++..+-++-+++.. +.-|+ +++.++|.+.++---.+.. +||+-++|.|
T Consensus 342 s~~~V~L~Y~~---~n~e~~~y~~eLr~~~-qkl~~--~~lHiiDSs~~g~l~~e~l-------------er~~~~~~~~ 402 (438)
T COG4097 342 SDPPVHLFYCS---RNWEEALYAEELRALA-QKLPN--VVLHIIDSSKDGYLDQEDL-------------ERYPDRPRTR 402 (438)
T ss_pred cCCceEEEEEe---cCCchhHHHHHHHHHH-hcCCC--eEEEEecCCCCCccCHHHh-------------hccccccCcc
Confidence 56899999999 8898777777777654 44565 6677766666553222211 2556667777
Q ss_pred cccccc
Q 004779 173 QAYFSE 178 (731)
Q Consensus 173 ~~yf~~ 178 (731)
..||=.
T Consensus 403 sv~fCG 408 (438)
T COG4097 403 SVFFCG 408 (438)
T ss_pred eEEEEc
Confidence 777743
No 99
>PF05045 RgpF: Rhamnan synthesis protein F; InterPro: IPR007739 This family consists of a group of proteins which are related to the Streptococcal rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O-polysaccharides found in phytopathogenic bacteria and are regarded as pathogenic factors [].
Probab=33.32 E-value=7.3e+02 Score=29.04 Aligned_cols=74 Identities=12% Similarity=0.046 Sum_probs=37.0
Q ss_pred CCChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCC-CchHHHHHHHHHHHHH-Hhhhh---cCCcc-ccceeEEEecc
Q 004779 296 CNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINK-YDIYDGRFRSAYCVQW-QGMDG---LKGPV-LSGTGYYIKRE 369 (731)
Q Consensus 296 ~~~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~-~d~~~~~~~~f~~~i~-~g~dg---~~~~~-~~Gtg~~~RR~ 369 (731)
+.+++.+.+.+..|.+ ++++|.|-.+..+...++ .+.++.+...--+... .|.+. ...++ ..||..-+|.+
T Consensus 380 L~s~~~v~~Il~~F~~---~p~lGlv~P~~~~~~~~~~~~~w~~N~~~~~~L~~rlg~~~~~~~~~~~~p~GtMFW~R~~ 456 (498)
T PF05045_consen 380 LGSKEYVDNILSAFED---DPRLGLVIPDISHFRYPTIGDAWGENREIMKELAKRLGITKPIDDDTFFFPYGTMFWFRPE 456 (498)
T ss_pred cCCHHHHHHHHHHHhh---CCCceEEeCCccccccccccccccccHHHHHHHHHHcCCCCCCccCCccccCccEEEeeHH
Confidence 4446888999998873 236999954443322111 1122111111111111 12211 12232 35999999999
Q ss_pred ccc
Q 004779 370 SLY 372 (731)
Q Consensus 370 aL~ 372 (731)
||.
T Consensus 457 AL~ 459 (498)
T PF05045_consen 457 ALR 459 (498)
T ss_pred HHH
Confidence 996
No 100
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=33.14 E-value=83 Score=33.23 Aligned_cols=30 Identities=27% Similarity=0.343 Sum_probs=22.5
Q ss_pred CCCCEEEEeCCCCCCCChHHHHHHHHHhcCCC
Q 004779 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (731)
Q Consensus 282 t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~~ 313 (731)
++.+.++.+|-|++++ ++-|++.+.-| ||.
T Consensus 85 ~~~~Wf~~~DDDtyv~-~~~L~~~L~~~-~~~ 114 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVN-VENLRRLLSKY-DPS 114 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS--TT
T ss_pred CCceEEEEEeCCceec-HHHHHHHHhhC-CCc
Confidence 4679999999999997 88888888755 443
No 101
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=30.11 E-value=1.5e+02 Score=28.55 Aligned_cols=44 Identities=14% Similarity=0.035 Sum_probs=34.0
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCChHHHHHHHHHhc
Q 004779 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 310 (731)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~-~~~~p~~l~~~v~~f~ 310 (731)
..+-++++..|++... .+.+.+++++||+ .++ ++.+++++..+.
T Consensus 73 ~~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 117 (186)
T cd04182 73 EEGMSSSLAAGLEALP--ADADAVLILLADQPLVT-AETLRALIDAFR 117 (186)
T ss_pred hhCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCCC-HHHHHHHHHHHH
Confidence 3567888999998732 1378999999999 444 889988887765
No 102
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=28.46 E-value=2.1e+02 Score=28.81 Aligned_cols=53 Identities=17% Similarity=0.151 Sum_probs=37.6
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCChHHHHHHHHHhcC
Q 004779 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 311 (731)
Q Consensus 251 l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~-~~~~p~~l~~~v~~f~D 311 (731)
+.++.++. ..+.++++-+++.... .+.+.+++++||+ +.. ++.+.+++..+.+
T Consensus 64 ~~~~~~~~-----~~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~~-~~~i~~l~~~~~~ 117 (229)
T cd02540 64 VEFVLQEE-----QLGTGHAVKQALPALK--DFEGDVLVLYGDVPLIT-PETLQRLLEAHRE 117 (229)
T ss_pred cEEEECCC-----CCCCHHHHHHHHHhhc--cCCCeEEEEeCCccccC-HHHHHHHHHHHHh
Confidence 55555432 3578999999998732 1268899999999 344 7888888877653
No 103
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=27.89 E-value=2.1e+02 Score=27.64 Aligned_cols=42 Identities=19% Similarity=0.247 Sum_probs=34.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHh
Q 004779 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (731)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f 309 (731)
..+-.+.+..|++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 45678899999998 5689999999999544489998888766
No 104
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=25.28 E-value=1.4e+02 Score=29.11 Aligned_cols=42 Identities=12% Similarity=0.131 Sum_probs=33.8
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCChHHHHHHHHHhc
Q 004779 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 310 (731)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~-~~~~p~~l~~~v~~f~ 310 (731)
..+-.+++-.+++. .+.+.+++++||+ .++ ++.+++++..+.
T Consensus 72 ~~g~~~si~~al~~----~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 114 (186)
T TIGR02665 72 FPGPLAGILAGLRW----AGTDWVLTVPCDTPFLP-EDLVARLAAALE 114 (186)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEecCCCcCC-HHHHHHHHHHhh
Confidence 35678888888887 5678999999999 455 899998888764
No 105
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=24.79 E-value=3.2e+02 Score=27.41 Aligned_cols=42 Identities=14% Similarity=0.007 Sum_probs=33.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc
Q 004779 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (731)
Q Consensus 265 ~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~ 310 (731)
.+-.+++-.+++. .+.+.+++++||+-.-+++.+++++..+.
T Consensus 78 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 78 QGPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred CChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 4556778888887 56789999999997666899988887664
No 106
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=24.75 E-value=6.1e+02 Score=25.89 Aligned_cols=57 Identities=19% Similarity=0.220 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCc----chhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCch
Q 004779 651 VSLMILNMAALLCGFIRIIAVGNW----DKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISP 709 (731)
Q Consensus 651 ~~l~~l~l~al~~g~~r~~~~~~~----~~~~~~~~~~~w~l~~l~p~~~al~~r~~k~~~p~ 709 (731)
..++++.+++++-|+.-+++.... -.++...+..++++..++-++.-..+ |+.+.|.
T Consensus 100 ssLl~lg~~aLlsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~a--d~sqr~~ 160 (226)
T COG4858 100 SSLLFLGAMALLSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRA--DNSQRPG 160 (226)
T ss_pred ccHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhc--ccccCCc
Confidence 456677888888888777753321 23344556677778888777766654 6777774
No 107
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=24.18 E-value=2.9e+02 Score=31.41 Aligned_cols=36 Identities=28% Similarity=0.091 Sum_probs=28.1
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHH
Q 004779 267 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (731)
Q Consensus 267 KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~ 307 (731)
|--|+|.|=.- -+++|++.|+|..+.++|.|.-.+.
T Consensus 98 Keea~~~~r~~-----~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 98 KEEALNWARSG-----WADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred HHHHHHHHHhh-----hcceeEEeehhheeeCCchHhHHHh
Confidence 56677766543 4799999999999998999876554
No 108
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=23.68 E-value=1.5e+02 Score=34.52 Aligned_cols=14 Identities=14% Similarity=0.425 Sum_probs=7.3
Q ss_pred HHHHHHHHHHhhhh
Q 004779 716 SVFFMIFLFFGSII 729 (731)
Q Consensus 716 ~~~~~~~~~~~~~~ 729 (731)
.+=+++|.++-..+
T Consensus 207 lvDaLLFiHYlavv 220 (505)
T PF06638_consen 207 LVDALLFIHYLAVV 220 (505)
T ss_pred HHHHHHHHHHHHHH
Confidence 44455555555444
No 109
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=22.26 E-value=2.1e+02 Score=32.14 Aligned_cols=15 Identities=20% Similarity=0.348 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHhhh
Q 004779 714 LSSVFFMIFLFFGSI 728 (731)
Q Consensus 714 ~s~~~~~~~~~~~~~ 728 (731)
.|.+=+++|.++.+.
T Consensus 229 tslvDaLLfiHYlaV 243 (531)
T KOG3814|consen 229 TSLVDALLFIHYLAV 243 (531)
T ss_pred HHHHHHHHHHHHHHH
Confidence 356667777776554
No 110
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=22.11 E-value=2.4e+02 Score=31.14 Aligned_cols=35 Identities=14% Similarity=0.223 Sum_probs=26.1
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHH
Q 004779 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA 302 (731)
Q Consensus 264 ~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l 302 (731)
.+.+..=-|..+.. +...++++=+||||+-. ++-|
T Consensus 159 ~n~l~~YYNy~ls~---ipk~~w~iKID~DhIy~-~~KL 193 (347)
T PF06306_consen 159 ENSLYNYYNYVLSF---IPKNEWAIKIDADHIYD-TKKL 193 (347)
T ss_pred hhhhhhhhhhhhcc---cccceEEEEeccceeec-HHHH
Confidence 45567777777765 25789999999999975 6554
No 111
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=21.85 E-value=1.7e+02 Score=32.80 Aligned_cols=35 Identities=34% Similarity=0.461 Sum_probs=25.5
Q ss_pred HHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHH
Q 004779 269 GALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 305 (731)
Q Consensus 269 GaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~ 305 (731)
.+|+..++..+ +.++|+|++-|.|.+|+ |+.|+.+
T Consensus 165 ~~l~~l~~~~~-~~~dDliivSDvDEIP~-p~~l~~L 199 (356)
T PF04724_consen 165 NALNGLLRLAG-IQDDDLIIVSDVDEIPS-PETLKFL 199 (356)
T ss_pred HHHHHHhhhcC-CCCCCEEEEcCcccccC-HHHHHHH
Confidence 45555555444 47899999999999987 8777543
No 112
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=21.56 E-value=2.4e+02 Score=27.29 Aligned_cols=43 Identities=14% Similarity=-0.039 Sum_probs=32.1
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc
Q 004779 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (731)
Q Consensus 265 ~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~ 310 (731)
.+-++++-.+++. ..+.+.+++++||+-.-+++.+++++..+.
T Consensus 74 ~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 116 (188)
T TIGR03310 74 EGQSSSIKLGLEL---PVQSDGYLFLLGDQPFVTPDIIQLLLEAFA 116 (188)
T ss_pred cCHHHHHHHHhcC---CCCCCEEEEEeCCcCCCCHHHHHHHHHHHH
Confidence 4567778888872 156789999999994334899999888665
No 113
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=20.33 E-value=2.1e+02 Score=26.01 Aligned_cols=21 Identities=24% Similarity=0.558 Sum_probs=16.6
Q ss_pred HHcCCCCCCCeEEEEEcCCCCc
Q 004779 121 AMALDYPVDKLHVYLSDDGGSP 142 (731)
Q Consensus 121 ~l~~dYP~~kl~v~v~DDg~~~ 142 (731)
-+..+||..|+ |+|-|||-.|
T Consensus 57 ~i~~~fP~~kf-iLIGDsgq~D 77 (100)
T PF09949_consen 57 RILRDFPERKF-ILIGDSGQHD 77 (100)
T ss_pred HHHHHCCCCcE-EEEeeCCCcC
Confidence 33468998666 8899999988
Done!