Query 004783
Match_columns 730
No_of_seqs 316 out of 799
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 05:38:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004783.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004783hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p0l_A Steroidogenic acute reg 100.0 1.4E-34 4.7E-39 292.9 21.4 184 154-349 29-215 (221)
2 2r55_A STAR-related lipid tran 100.0 8.6E-34 2.9E-38 288.4 25.9 186 155-350 42-230 (231)
3 3fo5_A Thioesterase, adipose a 100.0 5.1E-34 1.7E-38 297.2 17.3 208 130-351 36-249 (258)
4 1em2_A MLN64 protein; beta bar 100.0 3E-33 1E-37 284.3 22.2 184 155-350 41-227 (229)
5 1jss_A Stard4, cholesterol-reg 100.0 3.1E-33 1.1E-37 284.0 21.3 181 155-348 42-223 (224)
6 2pso_A STAR-related lipid tran 100.0 8.9E-33 3E-37 284.1 22.6 181 154-351 48-230 (237)
7 3qsz_A STAR-related lipid tran 100.0 2.7E-31 9.4E-36 261.5 23.1 179 155-350 2-181 (189)
8 1ln1_A PC-TP, phosphatidylchol 100.0 4.8E-30 1.6E-34 256.8 22.3 181 153-349 25-210 (214)
9 2e3n_A Lipid-transfer protein 100.0 2E-29 6.9E-34 260.3 23.2 193 148-351 39-249 (255)
10 1wi1_A Calcium-dependent activ 99.5 8E-14 2.7E-18 130.2 9.1 88 8-100 6-111 (126)
11 1v88_A Oxysterol binding prote 99.5 1.2E-13 4E-18 129.6 10.0 91 4-101 2-126 (130)
12 2cod_A Centaurin-delta 1; ARF 99.3 2.9E-12 1E-16 115.4 10.4 92 4-100 2-100 (115)
13 1wgq_A FYVE, rhogef and PH dom 99.3 4E-12 1.4E-16 113.5 10.4 89 6-100 4-104 (109)
14 1v89_A Hypothetical protein KI 99.3 5.6E-12 1.9E-16 113.0 9.9 90 6-101 4-114 (118)
15 2coc_A FYVE, rhogef and PH dom 99.3 3E-12 1E-16 117.2 8.2 91 4-101 2-108 (112)
16 1u5d_A SKAP55, SRC kinase-asso 99.3 7E-12 2.4E-16 110.4 10.0 89 9-100 2-106 (108)
17 1v5u_A SBF1, SET binding facto 99.3 4.6E-12 1.6E-16 113.8 8.6 89 6-100 4-112 (117)
18 1pls_A Pleckstrin homology dom 99.3 6E-12 2E-16 112.9 9.3 87 8-100 3-102 (113)
19 4a6h_A Phosphatidylinositol 4, 99.3 5.3E-12 1.8E-16 116.9 9.2 86 10-98 6-117 (120)
20 2dhk_A TBC1 domain family memb 99.3 8.4E-12 2.9E-16 113.9 10.1 92 5-100 3-105 (119)
21 2w2x_D 1-phosphatidylinositol- 99.3 1E-12 3.5E-17 121.4 3.9 89 9-100 11-120 (124)
22 2rsg_A Collagen type IV alpha- 99.3 2.4E-12 8.1E-17 112.1 5.7 85 10-98 1-93 (94)
23 1eaz_A Tandem PH domain contai 99.3 9.3E-12 3.2E-16 113.1 9.1 88 8-101 12-113 (125)
24 1v5p_A Pleckstrin homology dom 99.3 8.7E-12 3E-16 116.2 8.5 92 6-99 11-120 (126)
25 1x1f_A Signal-transducing adap 99.3 1E-11 3.6E-16 119.1 9.1 90 8-103 16-117 (149)
26 2dn6_A KIAA0640 protein; PH do 99.3 9.9E-12 3.4E-16 111.3 8.3 89 6-100 4-104 (115)
27 2i5f_A Pleckstrin; PH domain, 99.3 1.3E-11 4.6E-16 109.4 9.0 87 6-98 3-108 (109)
28 2dkp_A Pleckstrin homology dom 99.3 1.4E-11 4.9E-16 112.5 9.4 91 7-102 18-122 (128)
29 1fao_A Dual adaptor of phospho 99.2 1.6E-11 5.4E-16 112.2 9.3 89 6-100 14-113 (126)
30 2d9y_A Pleckstrin homology dom 99.2 2.1E-11 7.1E-16 109.5 9.6 89 7-100 8-110 (117)
31 2yry_A Pleckstrin homology dom 99.2 1.7E-11 5.9E-16 111.0 8.7 86 9-99 21-120 (122)
32 1upq_A PEPP1; PH domain, phosp 99.2 2.4E-11 8.1E-16 110.3 9.5 88 8-100 9-110 (123)
33 1x05_A Pleckstrin; PH domain, 99.2 2.4E-11 8.3E-16 111.4 9.6 89 7-101 15-122 (129)
34 2y7b_A Actin-binding protein a 99.2 1E-11 3.6E-16 114.5 6.5 92 7-99 2-128 (134)
35 1fgy_A GRP1; PH domain, signal 99.2 3.7E-11 1.3E-15 109.2 9.9 88 8-101 3-122 (127)
36 2cof_A Protein KIAA1914; PH do 99.2 1.7E-11 5.6E-16 109.6 7.3 89 4-99 2-101 (107)
37 1dyn_A Dynamin; signal transdu 99.2 1.4E-11 4.8E-16 114.3 6.9 87 8-98 10-116 (125)
38 1wg7_A Dedicator of cytokinesi 99.2 2.5E-11 8.4E-16 114.6 8.5 90 8-99 16-124 (150)
39 3rcp_A Pleckstrin homology dom 99.2 2.4E-11 8.2E-16 107.2 7.9 85 12-100 1-94 (103)
40 2d9x_A Oxysterol binding prote 99.2 4.4E-11 1.5E-15 108.9 9.9 90 7-100 5-105 (120)
41 3aj4_A Pleckstrin homology dom 99.2 2E-11 6.9E-16 109.3 6.8 85 9-99 4-111 (112)
42 2lul_A Tyrosine-protein kinase 99.2 6.1E-11 2.1E-15 114.9 10.1 95 5-101 10-123 (164)
43 3cxb_B Pleckstrin homology dom 99.2 4.2E-11 1.4E-15 108.7 8.4 86 12-100 2-102 (112)
44 1u5f_A SRC-associated adaptor 99.2 4.7E-11 1.6E-15 112.6 9.0 90 8-100 15-120 (148)
45 1btk_A Bruton'S tyrosine kinas 99.2 2.8E-11 9.7E-16 118.1 7.4 92 9-100 2-133 (169)
46 2da0_A 130-kDa phosphatidylino 99.2 6.7E-11 2.3E-15 106.9 9.0 87 8-100 8-102 (114)
47 1x1g_A Pleckstrin 2; PH domain 99.2 4.3E-11 1.5E-15 109.6 7.6 87 8-99 16-124 (129)
48 1u5e_A SRC-associated adaptor 99.2 6.8E-11 2.3E-15 119.4 9.8 89 9-100 105-209 (211)
49 2d9v_A Pleckstrin homology dom 99.1 8.1E-11 2.8E-15 109.2 8.8 90 5-100 3-115 (130)
50 1unq_A RAC-alpha serine/threon 99.1 8.4E-11 2.9E-15 107.4 8.3 90 8-100 6-111 (125)
51 1wjm_A Beta-spectrin III; PH d 99.1 1E-10 3.5E-15 106.8 8.8 99 4-102 2-120 (123)
52 2p0d_A RHO GTPase-activating p 99.1 1.3E-10 4.6E-15 108.0 8.9 95 4-100 6-125 (129)
53 1btn_A Beta-spectrin; signal t 99.1 2.1E-10 7.3E-15 101.0 7.3 86 12-97 1-106 (106)
54 2ys3_A UNC-112-related protein 99.1 2E-10 6.9E-15 108.2 7.2 96 3-99 2-112 (137)
55 3tfm_A Myosin X; split PH doma 99.0 3.1E-10 1.1E-14 115.6 8.5 89 8-99 56-155 (228)
56 2j59_M RHO-GTPase activating p 99.0 6.1E-10 2.1E-14 107.2 7.9 90 9-99 2-111 (168)
57 2dtc_A RAL guanine nucleotide 98.9 2.3E-09 7.8E-14 100.2 9.6 92 11-103 2-116 (126)
58 2rlo_A Centaurin-gamma 1; spli 98.9 4.5E-10 1.5E-14 103.6 4.0 90 9-99 3-124 (128)
59 3a8p_A T-lymphoma invasion and 98.9 2.2E-09 7.6E-14 111.9 9.6 95 6-100 7-125 (263)
60 3tca_A Amyloid beta A4 precurs 98.9 6E-09 2.1E-13 108.2 10.0 84 9-98 167-275 (291)
61 2q13_A DCC-interacting protein 98.9 4E-09 1.4E-13 115.0 9.0 89 8-100 276-376 (385)
62 1dro_A Beta-spectrin; cytoskel 98.8 2.7E-09 9.4E-14 97.5 5.0 97 4-100 2-120 (122)
63 2fjl_A 1-phosphatidylinositol- 98.8 9.8E-09 3.4E-13 98.3 8.8 87 11-100 2-149 (150)
64 2r09_A Cytohesin-3; autoinhibi 98.8 8.9E-09 3E-13 111.2 9.5 85 10-100 213-329 (347)
65 4h8s_A DCC-interacting protein 98.8 7.2E-09 2.5E-13 113.7 8.0 90 8-101 299-400 (407)
66 3lju_X ARF-GAP with dual PH do 98.8 7.1E-09 2.4E-13 113.6 7.4 90 6-100 265-373 (386)
67 1qqg_A IRS-1, insulin receptor 98.7 9.6E-09 3.3E-13 107.2 6.4 90 4-100 4-113 (264)
68 3pp2_A RHO GTPase-activating p 98.7 2.5E-08 8.5E-13 92.0 8.2 94 7-100 5-124 (124)
69 3lju_X ARF-GAP with dual PH do 98.7 2.5E-08 8.5E-13 109.3 8.6 85 9-99 145-246 (386)
70 2rov_A RHO-associated protein 98.6 3.8E-08 1.3E-12 90.6 5.0 89 11-99 2-115 (117)
71 4f7h_A Fermitin family homolog 98.5 2E-07 6.8E-12 90.3 9.0 95 4-99 41-150 (173)
72 4gmv_A RAS-associated and plec 98.4 5.9E-07 2E-11 94.5 8.6 89 8-99 156-266 (281)
73 4ejn_A RAC-alpha serine/threon 98.4 2.1E-07 7.1E-12 102.2 5.4 89 8-99 4-108 (446)
74 3a8n_A TIAM-1, T-lymphoma inva 98.4 6.9E-07 2.4E-11 93.9 8.6 93 7-99 8-124 (279)
75 4bbk_A Kindlin-1, fermitin fam 98.2 4.1E-06 1.4E-10 80.4 8.3 94 5-99 21-129 (165)
76 3hk0_A Growth factor receptor- 98.0 1E-05 3.6E-10 84.0 7.4 87 7-99 129-240 (256)
77 2d9w_A Docking protein 2; PH d 97.9 7E-05 2.4E-09 69.6 10.2 91 8-100 10-122 (127)
78 2d4r_A Hypothetical protein TT 97.8 0.0011 3.8E-08 59.4 18.0 141 187-349 3-145 (147)
79 1t17_A Conserved hypothetical 97.8 0.00038 1.3E-08 64.8 14.9 139 186-348 2-144 (148)
80 3tl1_A WHIE ORF VI, polyketide 97.7 0.0019 6.5E-08 62.0 17.7 144 188-350 5-148 (159)
81 3tvq_A Multifunctional cyclase 97.7 0.0011 3.6E-08 64.5 15.8 144 188-350 5-148 (169)
82 3tfz_A Cyclase; helix-GRIP, BE 97.6 0.0021 7.4E-08 61.7 16.6 147 184-349 3-160 (172)
83 2pcs_A Conserved protein; stru 97.4 0.0039 1.3E-07 58.5 16.1 144 188-350 5-150 (162)
84 2d9z_A Protein kinase C, NU ty 97.3 0.00067 2.3E-08 63.2 9.1 91 7-100 5-124 (129)
85 2coa_A Protein kinase C, D2 ty 97.3 0.00099 3.4E-08 61.8 9.4 90 5-100 3-120 (125)
86 2ns9_A Hypothetical protein AP 97.0 0.019 6.4E-07 53.1 15.5 139 188-347 15-155 (157)
87 3ggn_A Uncharacterized protein 97.0 0.017 5.6E-07 54.4 15.2 143 186-351 4-149 (155)
88 3p9v_A Uncharacterized protein 96.5 0.06 2.1E-06 51.0 15.2 117 188-324 9-126 (161)
89 3f08_A Uncharacterized protein 96.0 0.084 2.9E-06 49.5 12.8 133 188-347 4-137 (146)
90 3ijt_A SMU.440, putative uncha 95.7 0.046 1.6E-06 52.0 9.9 135 185-347 17-153 (155)
91 1w1g_A HPDK1, 3-phosphoinositi 95.5 0.013 4.3E-07 56.2 5.2 82 10-100 52-140 (151)
92 3p51_A Uncharacterized protein 95.2 0.31 1E-05 46.6 13.8 138 188-349 4-143 (160)
93 2le1_A Uncharacterized protein 95.1 0.17 5.7E-06 46.8 11.5 140 187-350 3-145 (151)
94 2qpv_A Uncharacterized protein 94.8 0.28 9.6E-06 46.8 12.2 126 187-348 28-155 (156)
95 1v61_A RAC/CDC42 guanine nucle 94.7 0.024 8.1E-07 53.2 4.4 70 29-101 44-128 (132)
96 1mai_A Phospholipase C delta-1 93.6 0.082 2.8E-06 48.9 5.6 85 12-100 15-122 (131)
97 3tfm_A Myosin X; split PH doma 92.7 0.095 3.2E-06 52.8 4.8 44 10-61 21-64 (228)
98 1tw0_A Pathogenesis-related cl 92.6 6.1 0.00021 37.3 17.1 150 188-351 5-155 (157)
99 1e09_A PRU AV 1; allergen, maj 91.3 4.7 0.00016 38.1 14.8 148 188-351 5-156 (159)
100 2qim_A PR10.2B; trans-zeatin, 90.3 5.9 0.0002 37.3 14.4 149 188-351 6-156 (158)
101 1icx_A Protein LLR18A, LLPR10. 90.1 4.2 0.00014 38.3 13.1 147 188-350 5-153 (155)
102 3qwm_A Iqsec1, IQ motif and SE 89.3 0.76 2.6E-05 43.4 7.1 79 22-100 26-123 (140)
103 3rt2_A Abscisic acid receptor 89.1 2.7 9.3E-05 41.2 11.2 136 192-347 33-175 (183)
104 2flh_A Cytokinin-specific bind 88.1 10 0.00035 35.6 14.2 141 188-349 5-153 (155)
105 3kl1_A PYL2, putative uncharac 86.1 8.6 0.0003 37.8 12.8 139 192-349 41-184 (190)
106 3p6a_A RHO guanine nucleotide 85.0 0.96 3.3E-05 48.2 5.8 86 11-100 260-372 (377)
107 3mpx_A FYVE, rhogef and PH dom 84.9 0.99 3.4E-05 49.1 6.0 83 11-100 245-338 (434)
108 2dfk_A Collybistin II; DH doma 83.2 3.3 0.00011 44.9 9.1 85 12-100 259-364 (402)
109 3ky9_A Proto-oncogene VAV; cal 83.1 1.9 6.7E-05 49.1 7.6 84 12-101 408-509 (587)
110 1xcg_A PDZ-rhogef, RHO guanine 82.3 1.8 6.2E-05 45.9 6.6 84 12-100 255-367 (368)
111 2vrw_B P95VAV, VAV1, proto-onc 82.2 2.4 8.1E-05 45.8 7.5 88 12-102 236-338 (406)
112 3oqu_A Abscisic acid receptor 81.9 10 0.00034 37.9 11.3 134 193-347 59-199 (205)
113 3odw_A RHO guanine nucleotide 81.5 1.8 6E-05 49.1 6.4 88 10-102 412-527 (536)
114 2pz1_A RHO guanine nucleotide 81.4 2.9 9.9E-05 46.0 8.0 86 12-100 336-441 (466)
115 3t06_A PDZ-rhogef, RHO guanine 81.2 1.9 6.6E-05 46.6 6.4 88 11-103 296-412 (418)
116 1dbh_A Protein (human SOS 1); 79.5 3.3 0.00011 43.7 7.4 80 12-99 249-349 (354)
117 3jrs_A PYL1, putative uncharac 79.5 7 0.00024 39.1 9.3 139 192-349 60-205 (208)
118 2lg1_A A-kinase anchor protein 78.9 2 7E-05 41.9 5.1 83 12-100 73-173 (185)
119 3jzy_A Intersectin 2; C2 domai 78.2 0.43 1.5E-05 52.9 0.0 84 11-101 254-364 (510)
120 1kz7_A Guanine nucleotide exch 77.8 3 0.0001 44.3 6.4 88 12-100 212-326 (353)
121 3rws_A MTN13 protein; zeatin, 76.0 56 0.0019 31.2 15.7 147 188-352 11-163 (168)
122 1zc3_B Exocyst complex protein 75.1 11 0.00037 33.9 8.4 84 12-99 10-107 (113)
123 4a8u_A Major pollen allergen B 74.4 58 0.002 30.6 14.5 147 188-351 5-156 (159)
124 1nty_A Triple functional domai 74.3 4.5 0.00015 42.0 6.5 71 30-101 222-310 (311)
125 2i9y_A Major latex protein-lik 71.6 32 0.0011 32.6 11.3 144 187-349 18-165 (166)
126 1txd_A RHO guanine nucleotide 71.2 4.7 0.00016 43.1 6.0 23 78-100 348-370 (385)
127 1z94_A Conserved hypothetical 70.8 55 0.0019 28.8 15.3 30 187-217 4-33 (147)
128 3k3k_A Abscisic acid receptor 69.7 47 0.0016 33.2 12.4 133 192-349 56-198 (211)
129 2leq_A Uncharacterized protein 68.0 62 0.0021 28.3 15.1 30 186-216 5-34 (146)
130 3qrz_A Abscisic acid receptor 67.2 2.4 8.2E-05 42.9 2.4 112 192-321 84-198 (223)
131 3zvr_A Dynamin-1; hydrolase, D 64.5 7.6 0.00026 46.0 6.3 87 10-97 540-643 (772)
132 3oji_A Abscisic acid receptor 63.6 47 0.0016 32.7 10.8 138 191-348 35-186 (189)
133 2z0q_A XPLN, RHO guanine nucle 62.9 6.2 0.00021 41.4 4.7 70 30-99 244-346 (346)
134 2vjg_A Major allergen DAU C 1; 62.3 46 0.0016 31.3 10.2 119 187-319 5-125 (154)
135 2lcg_A Uncharacterized protein 56.3 1.1E+02 0.0037 27.2 15.8 27 188-215 3-29 (142)
136 3ksy_A SOS-1, SON of sevenless 56.0 9.9 0.00034 46.5 5.4 83 11-100 445-547 (1049)
137 2rgn_B RHOA/RAC/CDC42 exchange 50.5 7.7 0.00026 41.1 2.9 72 29-101 228-320 (354)
138 2nn5_A Hypothetical protein EF 46.4 2E+02 0.0068 27.3 16.2 31 186-217 36-66 (184)
139 2vq5_A S-norcoclaurine synthas 45.7 1.9E+02 0.0066 28.4 12.0 147 187-351 30-181 (201)
140 2lf2_A Uncharacterized protein 40.1 2.3E+02 0.0078 26.2 14.3 31 185-216 15-45 (175)
141 2ldk_A Uncharacterized protein 39.4 2.2E+02 0.0077 25.9 15.7 30 186-216 12-41 (172)
142 3q6a_A Uncharacterized protein 38.7 26 0.00089 31.1 4.1 30 188-218 3-32 (135)
143 3pu2_A Uncharacterized protein 37.4 2.4E+02 0.0084 25.8 16.8 31 186-217 13-43 (164)
144 1v5m_A SH2 and PH domain-conta 36.4 80 0.0027 29.5 6.9 91 9-100 17-131 (136)
145 3ml4_A Protein DOK-7; tyrosine 35.0 77 0.0026 32.0 7.1 87 6-97 5-111 (224)
146 2l8o_A Uncharacterized protein 34.0 2.5E+02 0.0087 25.0 15.6 29 186-215 2-30 (144)
147 3put_A Hypothetical conserved 31.2 3.1E+02 0.011 25.1 16.4 31 186-217 9-39 (166)
148 2lgh_A Uncharacterized protein 30.5 2.9E+02 0.0099 24.6 15.8 27 188-215 3-29 (144)
149 2rr3_B OSBP, oxysterol-binding 30.2 22 0.00075 27.0 1.6 12 408-419 15-26 (47)
150 1xuv_A Hypothetical protein MM 28.9 3.5E+02 0.012 24.9 15.9 31 186-217 22-52 (178)
151 3ie5_A Phenolic oxidative coup 27.0 4E+02 0.014 25.1 12.6 146 188-351 12-162 (165)
152 1qc6_A EVH1 domain from ENA/VA 23.2 1E+02 0.0034 28.2 5.2 60 38-100 44-111 (130)
153 2il5_A Hypothetical protein; s 22.2 4.4E+02 0.015 23.8 16.4 31 186-217 14-44 (171)
154 3v5w_A G-protein coupled recep 21.9 97 0.0033 36.2 5.9 86 10-99 559-652 (689)
155 1xfs_A NC_840354, conserved hy 21.6 50 0.0017 30.8 2.9 31 185-216 9-39 (178)
156 1xn6_A Hypothetical protein BC 21.0 35 0.0012 30.5 1.6 33 185-218 7-39 (143)
157 3eli_A AHSA1, AHA1 domain prot 20.8 33 0.0011 31.1 1.4 31 186-217 2-32 (152)
158 2lak_A AHSA1-like protein RHE_ 20.8 43 0.0015 30.6 2.2 32 186-218 9-40 (160)
159 3q63_A MLL2253 protein; struct 20.6 42 0.0014 30.7 2.1 32 185-217 8-39 (151)
No 1
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=292.94 Aligned_cols=184 Identities=19% Similarity=0.206 Sum_probs=160.4
Q ss_pred CCCCCEEEE-ecCCeEEEEEeccCCCCCCCCCCceEEEEEEecCcHHHHHHHH-HhCCCCccccccccceeEEEEeecCc
Q 004783 154 APSPWTIFG-CQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIFQTL-MSLGASRSVWDFCFYRGCVVEHLDGH 231 (730)
Q Consensus 154 a~~~W~lv~-~~nGVrVy~r~~~~~~~~~~s~~~~~KavgvVdAspe~VfevL-~d~d~~R~eWD~~~~e~~VVE~iD~~ 231 (730)
+..+|++.. +++|++||++..++ + ++.||++++|+++|++|+++| +|++ .|++||+++.++++|++++++
T Consensus 29 ~~~gW~~~~~~~~gv~vy~~~~~~------~-g~~~k~~~~v~~~~~~v~~~l~~d~~-~r~~Wd~~~~~~~vle~~~~~ 100 (221)
T 3p0l_A 29 NQEGWKKESQQDNGDKVMSKVVPD------V-GKVFRLEVVVDQPMERLYEELVERME-AMGEWNPNVKEIKVLQKIGKD 100 (221)
T ss_dssp SCTTCEEEEECTTSCEEEEEECSS------S-CEEEEEEEEESSCHHHHHHHHTTTGG-GTTTSCTTCSEEEEEEECSSS
T ss_pred CCCCCeEeeecCCCcEEEEEEcCC------C-ceEEEEEEEEcCCHHHHHHHHHhccc-hhhhcCcchheEEEEEecCCC
Confidence 567899995 89999999998652 2 589999999999999999998 5888 799999999999999999999
Q ss_pred eEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCCcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCC-CeeEEEE
Q 004783 232 TDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHG-KKSVVKH 310 (730)
Q Consensus 232 tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g-~~t~VTy 310 (730)
++|+|+...+ +.++++++||||++|+|++. +|+|+++.+|++||.+|+++|||||++..|||+|+|++++ .+|+|||
T Consensus 101 t~I~y~~~~~-~~~~~v~~RDfv~~r~~~~~-~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~~~~t~vt~ 178 (221)
T 3p0l_A 101 TFITHELAAE-AAGNLVGPRDFVSVRCAKRR-GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTW 178 (221)
T ss_dssp EEEEEEEECC----CCSCCEEEEEEEEEEEC-SSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETTEEEEEEEEE
T ss_pred eEEEEEeecc-ccCCccCCceEEEEEEEEEc-CCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCCCCCcEEEEE
Confidence 9999988754 45689999999999999985 6889999999999999999999999999999999999753 3899999
Q ss_pred EEeeeCCCCcccccccchhhHHHHHHHHHHHHHHHHHhc
Q 004783 311 MLAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFRAK 349 (730)
Q Consensus 311 i~qvDpkGwip~~~~~~~~~i~~~mL~~va~LRe~~~~~ 349 (730)
++|+|||||+|.++ .+..++..+++.+.+||++++..
T Consensus 179 ~~~~Dp~G~iP~~l--vn~~~~~~~~~~~~~Lr~~~~~~ 215 (221)
T 3p0l_A 179 LLSIDLKGWLPKSI--INQVLSQTQVDFANHLRKRLESH 215 (221)
T ss_dssp EECEECCSSCCHHH--HHHHHHHHHHHHHHHHHHHTC--
T ss_pred EEEecCCCCCCHHH--HHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999764 34455667888999999999844
No 2
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=100.00 E-value=8.6e-34 Score=288.40 Aligned_cols=186 Identities=18% Similarity=0.157 Sum_probs=163.4
Q ss_pred CCCCEEEEecCCeEEEEEeccCCCCCCCCCCceEEEEEEecCcHHHHHHHH--HhCCCCccccccccceeEEEEeecCce
Q 004783 155 PSPWTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIFQTL--MSLGASRSVWDFCFYRGCVVEHLDGHT 232 (730)
Q Consensus 155 ~~~W~lv~~~nGVrVy~r~~~~~~~~~~s~~~~~KavgvVdAspe~VfevL--~d~d~~R~eWD~~~~e~~VVE~iD~~t 232 (730)
..+|+++.+++|++||++..+. +.++++|++++|++++++|+++| +|.+ .|++||+.+.++++|+++++++
T Consensus 42 ~~~W~~~~~~~gv~v~~~~~~~------~~~~~~k~~~~v~~~~~~v~~~l~~~d~~-~r~~Wd~~~~~~~vle~i~~~~ 114 (231)
T 2r55_A 42 TAGWKICREGNGVSVSWRPSVE------FPGNLYRGEGIVYGTLEEVWDCVKPAVGG-LRVKWDENVTGFEIIQSITDTL 114 (231)
T ss_dssp CSSCEEEECCSSEEEEEEECSS------SSSEEEEEEEEESSCHHHHHHHHCC--CC-SHHHHCTTCSEEEEEEECSSSE
T ss_pred CCCCEEEEeCCCEEEEEEccCC------CCCcEEEEEEEECCCHHHHHHHHHhhCcc-hhhhhccccceeEEEEEcCCCE
Confidence 4689999999999999997642 35789999999999999999999 7788 8999999999999999999999
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCCcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCC-CCeeEEEEE
Q 004783 233 DIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNH-GKKSVVKHM 311 (730)
Q Consensus 233 dIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~-g~~t~VTyi 311 (730)
+|+|+...+ +++|++++||||++|+|++.++|+|+|+.+|++||.+|+++|||||++..+||+|+|+++ +.+|+|||+
T Consensus 115 ~i~~~~~~~-~~~~~v~~RDfv~~r~~~~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~ 193 (231)
T 2r55_A 115 CVSRTSTPS-AAMKLISPRDFVDLVLVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTF 193 (231)
T ss_dssp EEEEEECCC-BTTTTBCCEEEEEEEEEEECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--CCCEEEEEE
T ss_pred EEEEEEecc-ccCCccCCCeEEEEEEEEEcCCCEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCCCCCcEEEEEE
Confidence 997776544 567899999999999999988899999999999999999999999999999999999953 348999999
Q ss_pred EeeeCCCCcccccccchhhHHHHHHHHHHHHHHHHHhcc
Q 004783 312 LAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFRAKQ 350 (730)
Q Consensus 312 ~qvDpkGwip~~~~~~~~~i~~~mL~~va~LRe~~~~~~ 350 (730)
+++||+||+|.++ ....++..++..+++||+++++.+
T Consensus 194 ~~~Dp~G~iP~~l--vn~~~~~~~~~~~~~Lr~~~~~~~ 230 (231)
T 2r55_A 194 FHTDLSGYLPQNV--VDSFFPRSMTRFYANLQKAVKQFH 230 (231)
T ss_dssp ECEECCSSCCHHH--HHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EEeCCCCCccHHH--HHHHHhHhHHHHHHHHHHHHHHhc
Confidence 9999999999654 234466678889999999998754
No 3
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.1e-34 Score=297.19 Aligned_cols=208 Identities=17% Similarity=0.187 Sum_probs=174.7
Q ss_pred CCCccccCCcccccc----cccccccccCCCCCEEEEecCCeEEEEEeccCCCCCCCCCCceEEEEEEecCcHHHHHHHH
Q 004783 130 SHTKSIDWTLCSGTH----MEQVTADVIAPSPWTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIFQTL 205 (730)
Q Consensus 130 ~~~~~~~~~~~~~~~----~~~~~~dv~a~~~W~lv~~~nGVrVy~r~~~~~~~~~~s~~~~~KavgvVdAspe~VfevL 205 (730)
-..+++.|+..|+++ |..++.++.+..+|++..+++||+||++... ....||++++|+++|++|+++|
T Consensus 36 ~~p~~~~w~~~~~~~l~~~n~~al~~l~~~~gW~~~~~~~gv~Vy~~~~~--------~~l~~k~~~~v~~~~~~v~~~L 107 (258)
T 3fo5_A 36 EVPLSVPWDPSNQVYLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLEDD--------KFLSFHMEMVVHVDAAQAFLLL 107 (258)
T ss_dssp TSCSEEECCGGGHHHHHHHHHHHHHHHHTCSCCEEEEEETTEEEEEEECS--------SCEEEEEEEEESSCHHHHHHHH
T ss_pred CCCcccccCcccceecccCCHHHHHhhhccCCCEEEecCCCeEEEEEECC--------CceEEEEEEEEeCCHHHHHHHH
Confidence 345777899999966 4557889999999999999999999997532 3578999999999999999999
Q ss_pred HhCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEc-CCC-cEEEEEEecCCCCCCCCC
Q 004783 206 MSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRE-DDG-TYVILYHSVFHKKCPRQK 283 (730)
Q Consensus 206 ~d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~-~dG-syvI~~~SV~Hp~~Pp~~ 283 (730)
+|++ .|++||+++.++++|+++|++ +++|+...| ++++++++||||++|+|++. .+| .|+|+.+|++||.+||++
T Consensus 108 ~D~~-~R~~WD~~~~~~~vle~id~~-~ivY~~~~p-~~~~~v~~RDFV~lr~~r~~~~~G~~yvi~~~SV~hp~~Pp~~ 184 (258)
T 3fo5_A 108 SDLR-QRPEWDKHYRSVELVQQVDED-DAIYHVTSP-ALGGHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETP 184 (258)
T ss_dssp HCGG-GGGGTCTTCCEEEEEEEEETT-EEEEEEEEC-CCTTCSSCEEEEEEEEEECCSSTTCCEEEEEEEEECTTSCCCT
T ss_pred hCch-hHhHhhhhccEEEEEEEcCCC-eEEEEEecC-CccCCCCCCEEEEEEEEEeccCCCCEEEEEEEeccCCCCCCCC
Confidence 9998 799999999999999999999 688866544 33367999999999999875 466 499999999999999999
Q ss_pred CeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCcccccccchhhHHHHHHHHHHHHHHHHHhccC
Q 004783 284 GSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFRAKQG 351 (730)
Q Consensus 284 G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip~~~~~~~~~i~~~mL~~va~LRe~~~~~~~ 351 (730)
|||||++++|||+|+|++++ .|+|+|+.|+||+ .+|.+..+... ++..+.++..+|++++.....
T Consensus 185 g~VR~~~~~sg~~I~P~~~~-~t~VtY~~q~dpG-~lP~~~~n~~g-~s~~~~~t~~~~~~fl~~~~~ 249 (258)
T 3fo5_A 185 EYRRGETLCSGFCLWREGDQ-LTKVSYYNQATPG-VLNYVTTNVAG-LSSEFYTTFKACEQFLLDNRN 249 (258)
T ss_dssp TSEECCCSSEEEEEEEEETT-EEEEEEEESCCGG-GHHHHHHHHHT-SCCHHHHHHHHHHHHHHHTC-
T ss_pred CCEEEEEcCcEEEEEECCCC-CEEEEEEEeeCCC-CCCceEEeccc-cchHHHHHHHHHHHHHHhccc
Confidence 99999999999999999765 8999999999995 48866443321 122345667799999987644
No 4
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=100.00 E-value=3e-33 Score=284.34 Aligned_cols=184 Identities=13% Similarity=0.124 Sum_probs=160.8
Q ss_pred CCCCEEEEec-CCeEEEEEeccCCCCCCCCCCceEEEEEEecCcHHHHH-HHHHhCCCCccccccccceeEEEEeecCce
Q 004783 155 PSPWTIFGCQ-NGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIF-QTLMSLGASRSVWDFCFYRGCVVEHLDGHT 232 (730)
Q Consensus 155 ~~~W~lv~~~-nGVrVy~r~~~~~~~~~~s~~~~~KavgvVdAspe~Vf-evL~d~d~~R~eWD~~~~e~~VVE~iD~~t 232 (730)
..+|+++.++ +|++||++..+. .+..+|++++|+++|++|| +++.|.+ .|++||+++.++++|+++++++
T Consensus 41 ~~~W~~~~~~~~g~~vy~~~~~~-------~g~~~k~~~~v~~~~~~v~~~~~~d~~-~r~~Wd~~~~~~~vle~~~~~t 112 (229)
T 1em2_A 41 EENWKFEKNNEYGDTVYTIEVPF-------HGKTFILKTFLPCPAELVYQEVILQPE-RMVLWNKTVTACQILQRVEDNT 112 (229)
T ss_dssp GGGCEEEEECTTCCEEEEEEETT-------TEEEEEEEEEESSCHHHHHHHTTTCHH-HHTTTCTTEEEEEEEEEETTTE
T ss_pred CCCCEEEEecCCCCEEEEEecCC-------CCceEEEEEEecCCHHHHHHHHHhCcc-chhhcccccceEEEEEecCCCe
Confidence 4689999987 899999997652 3468999999999999999 7888888 7999999999999999999999
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCCcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCC-CCCeeEEEEE
Q 004783 233 DIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMN-HGKKSVVKHM 311 (730)
Q Consensus 233 dIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~-~g~~t~VTyi 311 (730)
+|+|+...+ .++|++++||||++|+|++. ++.|+|+.+|++||.+|+++|||||++..|||+|+|++ ++.+|+|||+
T Consensus 113 ~I~~~~~~p-~~~~~~~~RDfv~~r~~~~~-~~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~ 190 (229)
T 1em2_A 113 LISYDVSAG-AAGGVVSPRDFVNVRRIERR-RDRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWI 190 (229)
T ss_dssp EEEEEEECC-BTTTTBCCEEEEEEEEEEEC-SSEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCEEEEEE
T ss_pred EEEEEEecC-cCCCCcCCCeeEEEEEEEEc-CCEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCCCCCcEEEEEE
Confidence 998887654 34589999999999999996 67799999999999999999999999999999999985 3458999999
Q ss_pred EeeeCCCCcccccccchhhHHHHHHHHHHHHHHHHHhcc
Q 004783 312 LAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFRAKQ 350 (730)
Q Consensus 312 ~qvDpkGwip~~~~~~~~~i~~~mL~~va~LRe~~~~~~ 350 (730)
+++|||||+|.++ ....+...|+..+++||+++++..
T Consensus 191 ~~~Dp~G~iP~~l--~n~~~~~~~~~~~~~Lr~~~~~~~ 227 (229)
T 1em2_A 191 LNTDLKGRLPRYL--IHQSLAATMFEFAFHLRQRISELG 227 (229)
T ss_dssp ECEECCSSSCHHH--HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEECCCCCCCHHH--HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999764 334455667888999999998754
No 5
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=100.00 E-value=3.1e-33 Score=284.03 Aligned_cols=181 Identities=14% Similarity=0.168 Sum_probs=157.4
Q ss_pred CCCCEEEEecCCeEEEEEeccCCCCCCCCCCceEEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEE
Q 004783 155 PSPWTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDI 234 (730)
Q Consensus 155 ~~~W~lv~~~nGVrVy~r~~~~~~~~~~s~~~~~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdI 234 (730)
..+|++..+++||+||++.... +.++.||++++|++++++|+++|+|.+ .|++||+++.++++||++|++++|
T Consensus 42 ~~~W~~~~~~~gv~vy~~~~~~------~~~~~~k~~~~v~~~~~~v~~~l~d~~-~r~~Wd~~~~~~~vle~id~~~~I 114 (224)
T 1jss_A 42 EDEWRVAKKAKDVTVWRKPSEE------FNGYLYKAQGVMDDVVNNVIDHIRPGP-WRLDWDRLMTSLDVLEHFEENCCV 114 (224)
T ss_dssp GGGCEEEEEETTEEEEEEECSS------SSSEEEEEEEEESSCHHHHHHHHSSST-THHHHCSSEEEEEEEEECSTTEEE
T ss_pred CCCCEEEEECCCEEEEEEeccC------CCceEEEEEEEEeCCHHHHHHHHhCcc-cccccccceeeEEEEEEcCCCeEE
Confidence 5689999999999999995442 456899999999999999999999988 799999999999999999999999
Q ss_pred EEEEEcCCCCCCCCCCceEEEEEEEEEcCCCcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCC-CCeeEEEEEEe
Q 004783 235 IHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNH-GKKSVVKHMLA 313 (730)
Q Consensus 235 vY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~-g~~t~VTyi~q 313 (730)
+|+.+++. .|+++++||||++|+|++.++| |+++.+|++||.+| +|||||++..|||+|+|+++ +++|+|||+++
T Consensus 115 ~y~~~~~~-~~~~v~~RDfv~~r~~~~~~~~-~vi~~~Sv~hp~~~--~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~ 190 (224)
T 1jss_A 115 MRYTTAGQ-LLNIISPREFVDFSYTVGYEEG-LLSCGVSVEWSETR--PEFVRGYNHPCGWFCVPLKDSPSQSLLTGYIQ 190 (224)
T ss_dssp EEEEECCB-TTTTBCCEEEEEEEEEEEETTE-EEEEEEECCCCCCC--TTSEECEECSEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEcccc-cCCCCCCCeEEEEEEEEEcCCe-EEEEEeeeecCCCC--CCCEEEEecccEEEEEEcCCCCCceEEEEEEE
Confidence 99998652 1224999999999999997555 78899999999995 59999999999999999954 35899999999
Q ss_pred eeCCCCcccccccchhhHHHHHHHHHHHHHHHHHh
Q 004783 314 IDWKCWRSYLQPSSARSITIRMLGRVAALRELFRA 348 (730)
Q Consensus 314 vDpkGwip~~~~~~~~~i~~~mL~~va~LRe~~~~ 348 (730)
+|||||+|.++ .+..++..+++++.+||+++++
T Consensus 191 ~Dp~G~iP~~l--vn~~~~~~~~~~~~~Lr~~~~~ 223 (224)
T 1jss_A 191 TDLRGMIPQSA--VDTAMASTLANFYSDLRKGLRK 223 (224)
T ss_dssp EECCSCCCHHH--HHHHHHHHHHHHHHHHHHHTC-
T ss_pred eCCCCCccHHH--HHHHHHHhHHHHHHHHHHHHhh
Confidence 99999999764 3445677788899999998753
No 6
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=100.00 E-value=8.9e-33 Score=284.11 Aligned_cols=181 Identities=24% Similarity=0.312 Sum_probs=157.1
Q ss_pred CCCCCEEEEecCCeEEEEEec-cCCCCCCCCCCceEEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCce
Q 004783 154 APSPWTIFGCQNGLRLFKEGK-DRGSRGKWDDHPAIMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHT 232 (730)
Q Consensus 154 a~~~W~lv~~~nGVrVy~r~~-~~~~~~~~s~~~~~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~t 232 (730)
...+|++..+++|++||++.. ++ +.++.||++++|++++++++..++. .|++||+.+.++++||++|+++
T Consensus 48 ~~~gW~~~~~~~gi~V~~k~~~~~------~~~~~~K~~~~v~~~~~~v~~~ll~---dr~~Wd~~~~~~~vle~id~~~ 118 (237)
T 2pso_A 48 KFKGWVTCSSTDNTDLAFKKVGDG------NPLKLWKASVEVEAPPSVVLNRVLR---ERHLWDEDFVQWKVVETLDRQT 118 (237)
T ss_dssp HCCSCEEECCSSSCEEEEECCCSS------CCCCEEEEEEEESSCHHHHHHHHHH---CGGGTCTTBCCCEEEEEEETTE
T ss_pred CCCCCEEEecCCCeEEEEEEcCCC------CCcEEEEEEEEEcCChHHHHHHHHh---hhhhHHhhhceEEEEEEcCCCc
Confidence 467899999999999999975 42 5679999999999999998765543 2899999999999999999999
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEEEEEc-CCCcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEE
Q 004783 233 DIIHKQLYSDWLPWGMKRRDLLLRRYWRRE-DDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHM 311 (730)
Q Consensus 233 dIvY~~~~~~~lP~pvs~RDFV~lR~wrr~-~dGsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi 311 (730)
+|+|+.++ .|||+++||||++|+|+++ ++|+|+|+.+|++||.+|++ |||||++..|||+|+|++++ +|+|||+
T Consensus 119 ~I~y~~~~---~p~p~~~RDfv~~r~~r~~~~~g~~vi~~~Sv~h~~~P~~-g~VR~~~~~~g~~i~P~~~~-~t~vt~~ 193 (237)
T 2pso_A 119 EIYQYVLN---SMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLL-GGVRAVVMDSQYLIEPCGSG-KSRLTHI 193 (237)
T ss_dssp EEEEEEEC---CSSSCCCEEEEEEEEEESCCGGGCEEEEEEECCCTTCCCC-SSEECCEEEEEEEEEECSTT-CEEEEEE
T ss_pred EEEEEEec---CCCCcCCeEEEEEEEEEEECCCCEEEEEEEcccCCCCCCC-CcEEEEEeccEEEEEECCCC-CEEEEEE
Confidence 99999984 5899999999999999974 68999999999999999999 99999999999999999755 8999999
Q ss_pred EeeeCCCCcccccccchhhHHHHHHHHHHHHHHHHHhccC
Q 004783 312 LAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFRAKQG 351 (730)
Q Consensus 312 ~qvDpkGwip~~~~~~~~~i~~~mL~~va~LRe~~~~~~~ 351 (730)
+++||+||+|.|++... ...+...+.+||+.|++...
T Consensus 194 ~~~Dp~G~iP~~ln~~~---~~~~~~~l~~LR~~~~~~~~ 230 (237)
T 2pso_A 194 CRIDLKGHSPEWYSKGF---GHLCAAEVARIRNSFQPLIA 230 (237)
T ss_dssp EEECCSSSCTTTTTTHH---HHHHHHHHHHHHHTTSCC--
T ss_pred EEeCCCCCchHHHHHHH---HHHHHHHHHHHHHHHHhhcC
Confidence 99999999998764433 33345678899999987644
No 7
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=99.98 E-value=2.7e-31 Score=261.52 Aligned_cols=179 Identities=13% Similarity=0.197 Sum_probs=156.1
Q ss_pred CCCCEEEEecCCeEEEEEeccCCCCCCCCCCceEEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEE
Q 004783 155 PSPWTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDI 234 (730)
Q Consensus 155 ~~~W~lv~~~nGVrVy~r~~~~~~~~~~s~~~~~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdI 234 (730)
+++|++..+++|++||++..++ +..+.+|++++|++||++++++|+|++ .|++||+.+.++++|++ +++++|
T Consensus 2 ~~~W~~~~~~~gv~v~~~~~~~------~~~~~~k~~~~v~~s~~~v~~~l~D~~-~~~~W~~~~~~~~vle~-~~~~~i 73 (189)
T 3qsz_A 2 QDGWSLAKDAEGIKVYVRNVEG------SPLREFRGEVRLKAAADDVVKVLRDAN-AFRQWMPDVAASELLKA-TDTEQY 73 (189)
T ss_dssp -CCCEEEEEETTEEEEEECCTT------CSSCEEEEEEEESSCHHHHHHHHHCGG-GGGGTSTTEEEEEEEEE-CSSEEE
T ss_pred CCCCEEEEcCCCEEEEEEeCCC------CCeEEEEEEEEEECCHHHHHHHHHhHH-HhhhHHHhcCEEEEEee-cCCceE
Confidence 5789999999999999998663 457899999999999999999999999 79999999999999999 999999
Q ss_pred EEEEEcCCCCCCCCCCceEEEEEEEEEcCCCcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEee
Q 004783 235 IHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAI 314 (730)
Q Consensus 235 vY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qv 314 (730)
+|+.+ .+||++++||||++++|+++.+|+++|...+ .|+.+|+++|+||+.+..|||+|+| +++ +|+|||++++
T Consensus 74 ~y~~~---~~p~p~~~RD~v~~~~~~~~~~g~~~i~~~~-~~~~~P~~~~~VR~~~~~~~~~i~p-~~~-~t~vt~~~~~ 147 (189)
T 3qsz_A 74 HYLDN---SAPWPVSNRDGVYHFTYEKAGDGAITVRVEA-VPDYLPLRKGKVRIPRAKGQWTLVP-DAD-GVDVTYQMHA 147 (189)
T ss_dssp EEEEE---CCSSSCCCEEEEEEEEEEECTTSCEEEEEEE-CTTSSCCCTTSEECCCEEEEEEEEE-CSS-SEEEEEEEEE
T ss_pred EEEEe---ecCCCcCCcceEEEEEEEECCCCeEEEEEEc-CCCccCCCCCeEEeeEeeEEEEEEE-CCC-eEEEEEEEEe
Confidence 99998 4689999999999999998777888887776 6999999999999999999999999 654 8999999999
Q ss_pred eCCCCcccc-cccchhhHHHHHHHHHHHHHHHHHhcc
Q 004783 315 DWKCWRSYL-QPSSARSITIRMLGRVAALRELFRAKQ 350 (730)
Q Consensus 315 DpkGwip~~-~~~~~~~i~~~mL~~va~LRe~~~~~~ 350 (730)
||+||+|.+ ++...+..+ ...+.+||+.++...
T Consensus 148 dp~G~iP~~lvn~~~~~~~---~~~l~~L~k~~~~~~ 181 (189)
T 3qsz_A 148 SPGGSIPSWLANQTVVETP---FGTLKALRSHLRQAH 181 (189)
T ss_dssp CSCSSSCHHHHHHTTTHHH---HHHHHHHHHHHTC--
T ss_pred CCCCCCCHHHHHHHHHHHH---HHHHHHHHHHhhhch
Confidence 999999965 444444444 445679999987543
No 8
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=99.97 E-value=4.8e-30 Score=256.82 Aligned_cols=181 Identities=16% Similarity=0.155 Sum_probs=155.2
Q ss_pred cCCCCCEEEEecCCeEEEEEeccCCCCCCCCCCceEEEEEEe-cCcHHHHHHHHHhCCCCccccccccceeEEEEeecCc
Q 004783 153 IAPSPWTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVV-DGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGH 231 (730)
Q Consensus 153 ~a~~~W~lv~~~nGVrVy~r~~~~~~~~~~s~~~~~KavgvV-dAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~ 231 (730)
.++.+|+++.+++|++||++..++ +..+.+|++++| ++++++|+++|+|++ .|++||+.+.++++|+. ++
T Consensus 25 ~~~~~W~~~~~~~~v~v~~~~~~~------~~~~~~k~~~~i~~~~~~~v~~~l~d~~-~r~~Wd~~~~~~~vle~-~~- 95 (214)
T 1ln1_A 25 LAGADWQLLVETSGISIYRLLDKK------TGLYEYKVFGVLEDCSPTLLADIYMDSD-YRKQWDQYVKELYEQEC-NG- 95 (214)
T ss_dssp CTTTTCEEEEEETTEEEEEEEETT------TTEEEEEEEEEETTSCHHHHHHHHHCHH-HHHHHCTTEEEEEEEEE-TT-
T ss_pred CCCCCcEEEEECCCeEEEEeccCC------CCcEEEEEEEEECCCCHHHHHHHHcCHH-HHHHHHHHHhhEEEecc-CC-
Confidence 356789999999999999997653 456899999999 599999999999988 79999999999999987 65
Q ss_pred eEEEEEEEcCCCCCCCCCCceEEEEEEEEEc-CCCc--EEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEE
Q 004783 232 TDIIHKQLYSDWLPWGMKRRDLLLRRYWRRE-DDGT--YVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVV 308 (730)
Q Consensus 232 tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~-~dGs--yvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~V 308 (730)
++|+|+++ .+|||+++||||++++|++. ++|. |+++.+|++||.+|+++|+||+.+..|||+|+|++++ +|+|
T Consensus 96 ~~i~~~~~---~~p~p~~~RD~v~~~~~~~~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~~-~t~v 171 (214)
T 1ln1_A 96 ETVVYWEV---KYPFPMSNRDYVYLRQRRDLDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGKK-GSKV 171 (214)
T ss_dssp EEEEEEEE---CCCTTSCCEEEEEEEEEEEECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSSS-SEEE
T ss_pred CEEEEEEE---EcCCCCCCceEEEEEEEEecccCCCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCCC-ceEE
Confidence 78999998 45899999999999999875 3663 7899999999999999999999999999999999754 8999
Q ss_pred EEEEeeeCCCCccccc-ccchhhHHHHHHHHHHHHHHHHHhc
Q 004783 309 KHMLAIDWKCWRSYLQ-PSSARSITIRMLGRVAALRELFRAK 349 (730)
Q Consensus 309 Tyi~qvDpkGwip~~~-~~~~~~i~~~mL~~va~LRe~~~~~ 349 (730)
+|++++||+||+|.++ +...+.. +...+.+||+.+..-
T Consensus 172 ~~~~~~Dp~G~iP~~l~n~~~~~~---~~~~l~~l~k~~~~y 210 (214)
T 1ln1_A 172 FMYYFDNPGGQIPSWLINWAAKNG---VPNFLKDMARACQNY 210 (214)
T ss_dssp EEEEEECCSSCCCHHHHHHHHHTH---HHHHHHHHHHHHHTC
T ss_pred EEEEEECCCCcccHHHHHHHHHHH---hHHHHHHHHHHHHhc
Confidence 9999999999999653 3333333 445567898888643
No 9
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=99.97 E-value=2e-29 Score=260.30 Aligned_cols=193 Identities=16% Similarity=0.221 Sum_probs=157.4
Q ss_pred ccccccCCCCCEEEEecCCeEEEEEeccCCCCCCCCCCceEEEEEEec-CcHHHHHHHHHhCCCCccccccccceeEEEE
Q 004783 148 VTADVIAPSPWTIFGCQNGLRLFKEGKDRGSRGKWDDHPAIMAVGVVD-GTSEAIFQTLMSLGASRSVWDFCFYRGCVVE 226 (730)
Q Consensus 148 ~~~dv~a~~~W~lv~~~nGVrVy~r~~~~~~~~~~s~~~~~KavgvVd-Aspe~VfevL~d~d~~R~eWD~~~~e~~VVE 226 (730)
+...+.+..+|+++.+++|++||++..+..+ ...+.+|+++++. +++++|+++|+|++ .|++||+++.++++||
T Consensus 39 ~~~~~~~~~~W~~~~~~~gv~vy~~~~~~~g----~~~~~~K~~~~~~~~~~~~v~~~l~d~~-~r~~Wd~~~~~~~vle 113 (255)
T 2e3n_A 39 SLQDVGGDANWQLVVEEGEMKVYRREVEENG----IVLDPLKATHAVKGVTGHEVCNYFWNVD-VRNDWETTIENFHVVE 113 (255)
T ss_dssp TTSCCTTCTTEEEEEEETTEEEEEECCEETT----EECCCEEEEEEEETCCHHHHHHHHHCGG-GHHHHCCSEEEEEEEE
T ss_pred HHhhcCCCCCcEEEEeCCCEEEEEEEcCCCC----ceeeeEEEEEEEcCCCHHHHHHHHhCcc-hHhhhhhhcceeEEEE
Confidence 4555566789999999999999999755311 1124699999885 99999999999998 8999999999999999
Q ss_pred eecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEc----CC--CcEEEEEEecCCCCCCCCCCeEEEEE---eceEEEE
Q 004783 227 HLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRE----DD--GTYVILYHSVFHKKCPRQKGSVRACL---KSGGYVI 297 (730)
Q Consensus 227 ~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~----~d--GsyvI~~~SV~Hp~~Pp~~G~VRa~i---~~gGwvI 297 (730)
+++++++|+|+.+ .+|||+++||||++|+|++. ++ +.|+++..|++||.+|+++|+|||.+ ..+||+|
T Consensus 114 ~i~~~~~i~y~~~---~~p~p~s~RDfV~~r~~~~~~~~~~~g~~~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i 190 (255)
T 2e3n_A 114 TLADNAIIIYQTH---KRVWPASQRDVLYLSVIRKIPALTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLV 190 (255)
T ss_dssp EEETTEEEEEEEE---CCCTTSCCEEEEEEEEEEEECCSSTTSCCEEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEE
T ss_pred EcCCCCEEEEEEe---ecCCCcCCceeEEEEEEEeccccccCCCCEEEEEEeccCCCCCCCCCCCEEEEEEeeeeeeeEe
Confidence 9999999999998 46899999999999999886 22 58999999999999999999999995 5678888
Q ss_pred EeC-CC------CCeeEEEEEEeeeCCCCccccc-ccchhhHHHHHHHHHHHHHHHHHhccC
Q 004783 298 TPM-NH------GKKSVVKHMLAIDWKCWRSYLQ-PSSARSITIRMLGRVAALRELFRAKQG 351 (730)
Q Consensus 298 ~Pl-~~------g~~t~VTyi~qvDpkGwip~~~-~~~~~~i~~~mL~~va~LRe~~~~~~~ 351 (730)
+|. ++ +.+|+|||++++|||||+|.++ +...+ ..+...+.+||+++..+-.
T Consensus 191 ~~~~g~~~l~~~~~~t~vt~~~~~Dp~G~iP~~lvn~~~~---~~~~~~l~~L~k~v~~~~~ 249 (255)
T 2e3n_A 191 SPPEGNQEISRDNILCKITYVANVNPGGWAPASVLRAVAK---REYPKFLKRFTSYVQEKTA 249 (255)
T ss_dssp C---CCCCCCGGGEEEEEEEEEEEECSSCCCHHHHHHHHH---HHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCcccccCCCcEEEEEEEEeCCCCccCHHHHHHHHh---ccccHHHHHHHHHHHHhcc
Confidence 886 21 2489999999999999999764 33222 2344567789998876543
No 10
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.47 E-value=8e-14 Score=130.17 Aligned_cols=88 Identities=16% Similarity=0.244 Sum_probs=72.4
Q ss_pred cccccceeEEEeeeccccccccceeeEEEecceeeecc----cCCCCCCCCCceeEEeecceEE-----ec-----cccc
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFK----SVPHSKNEDPVRSAIIDSCIRV-----TD-----NGRE 73 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk----~~p~~~~~~P~~~~ii~~~~~v-----~~-----~g~~ 73 (730)
...+++||||+.|.+.+ --+++|||||+|+.|+||| ++.+ .+|++++.++||++- +| +.|+
T Consensus 6 ~n~~~~G~L~KqG~~~~--K~WKrRwFVL~~~~LyYfk~~~~~~~~---~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~ 80 (126)
T 1wi1_A 6 SGMKHSGYLWAIGKNVW--KRWKKRFFVLVQVSQYTFAMCSYREKK---AEPQELLQLDGYTVDYTDPQPGLEGGRAFFN 80 (126)
T ss_dssp CCEEEEEEEEEECSSSC--CSCEEEEEEEEEEETTEEEEEECCSSS---SCCSEEEECSSCEEEECCCCSSCCSCSSEEE
T ss_pred CCCceeEEEEEeCCCcc--cccceEEEEEeCCEEEEEEcccccccC---CCCceEEECCCcEEEEecCCcccccCceEEE
Confidence 45579999999998533 3479999999999999999 6665 799999999998752 22 2466
Q ss_pred eecc----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 74 SIHR----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 74 ~~h~----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
++|. .|+|.|+||++.||+||..|+-+
T Consensus 81 ~v~~~~ty~~~Adseee~~~WikAi~~A~~~ 111 (126)
T 1wi1_A 81 AVKEGDTVIFASDDEQDRILWVQAMYRATGQ 111 (126)
T ss_dssp EECSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred EecCCceEEEEcCCHHHHHHHHHHHHHHhcc
Confidence 5555 99999999999999999999863
No 11
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.47 E-value=1.2e-13 Score=129.58 Aligned_cols=91 Identities=21% Similarity=0.295 Sum_probs=76.2
Q ss_pred cccccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec------cccceecc
Q 004783 4 SQITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD------NGRESIHR 77 (730)
Q Consensus 4 ~~~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~------~g~~~~h~ 77 (730)
+|-++.+.++|||++.| +..-+++|||||+++.|.|||.+.+ ..|++++.+.+|++++. +.|+++|.
T Consensus 2 ~~~~~~v~k~GwL~K~g----~~k~WkrRWfVLk~~~L~yyk~~~~---~~p~G~I~L~~~~v~~~~~~~~~~~F~i~~~ 74 (130)
T 1v88_A 2 SSGSSGIVMADWLKIRG----TLKSWTKLWCVLKPGVLLIYKTQKN---GQWVGTVLLNACEIIERPSKKDGFCFKLFHP 74 (130)
T ss_dssp CCSSSSCCEEEEEEECC----SSSSCEEEEEEEETTEEEEESCSSS---CCCCEEEECSSCEECCCCTTTSSCEEEEECT
T ss_pred CCCCCceEEEeEEEEeC----CCCCceEEEEEEECCEEEEECCCCC---CCceEEEEcCCCEEEECCCCCCCeEEEEEcC
Confidence 45577888999999977 2335899999999999999998775 79999999999998654 35777652
Q ss_pred ----------------------------cccCCCHHHHHHHHHHHHHHHHhC
Q 004783 78 ----------------------------KLGASSPEEAAKWIHSLQEAALKG 101 (730)
Q Consensus 78 ----------------------------~~~a~~~e~a~~W~~a~~~a~~~~ 101 (730)
.|.|.|.+|+.+||+||+.|+...
T Consensus 75 ~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~~ 126 (130)
T 1v88_A 75 LEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKSG 126 (130)
T ss_dssp TCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTTT
T ss_pred CccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 489999999999999999998743
No 12
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.35 E-value=2.9e-12 Score=115.43 Aligned_cols=92 Identities=18% Similarity=0.227 Sum_probs=76.0
Q ss_pred cccccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec---cccceecc---
Q 004783 4 SQITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD---NGRESIHR--- 77 (730)
Q Consensus 4 ~~~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~---~g~~~~h~--- 77 (730)
++-.+++.++|||++.|.. +...+++|||||+++.|.|||.+.+ ..|.+.+.+.+++.|+. ++|++...
T Consensus 2 ~~~~~~~~~~G~L~K~~~~--~~~~WkkR~fvL~~~~L~yy~~~~~---~~~~g~i~l~~~~~v~~~~~~~F~i~~~~r~ 76 (115)
T 2cod_A 2 SSGSSGKVKSGWLDKLSPQ--GKRMFQKRWVKFDGLSISYYNNEKE---MYSKGIIPLSAISTVRVQGDNKFEVVTTQRT 76 (115)
T ss_dssp CCCCSCCCEEEEEEECCSS--SSSCCEEEEEEECSSEEEEEESSCC---SSCCCEEETTTEEEEEEETTTEEEEEESSCC
T ss_pred CCCCCCccEEEEEEEcCCC--CCCCCceEEEEEECCEEEEEcCCCC---cccCCEEECCcceEEEeCCCCEEEEEeCCcE
Confidence 4566778899999998863 3345899999999999999998765 57899998998877654 45776544
Q ss_pred -cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 -KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 -~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|.+|+.+||.||+.|+..
T Consensus 77 ~~l~a~s~~e~~~Wi~~l~~~~~~ 100 (115)
T 2cod_A 77 FVFRVEKEEERNDWISILLNALKS 100 (115)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999964
No 13
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.33 E-value=4e-12 Score=113.50 Aligned_cols=89 Identities=15% Similarity=0.270 Sum_probs=73.4
Q ss_pred cccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec-------cccceecc-
Q 004783 6 ITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD-------NGRESIHR- 77 (730)
Q Consensus 6 ~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~-------~g~~~~h~- 77 (730)
-++.+.++|||++.|.. ..-+++|||||+++.|.|||.+.+ ..|.+++.+.+|+.+.. +.|++.+.
T Consensus 4 ~~~~~~~~G~L~K~~~~---~~~Wk~RwfvL~~~~L~yyk~~~~---~~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~ 77 (109)
T 1wgq_A 4 GSSGSTMSGYLYRSKGS---KKPWKHLWFVIKNKVLYTYAASED---VAALESQPLLGFTVTLVKDENSESKVFQLLHKG 77 (109)
T ss_dssp CCCSCSCEEEEEEESST---TSCCEEEEEEEETTEEEEESCTTC---SSCSEEEECSSEEEEECCCSSCSSSEEEEEETT
T ss_pred CCCCCeEEEEEEeCCCC---CCCceeEEEEEeCCEEEEECCCCc---CccCceEECCCCEEEECCCCCCCCcEEEEEeCC
Confidence 35667899999998643 345899999999999999997765 68999999999988543 34666543
Q ss_pred ----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 ----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 ----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|.+|+.+||.||+.|+..
T Consensus 78 ~~~~~~~a~s~~e~~~Wi~al~~a~~~ 104 (109)
T 1wgq_A 78 MVFYVFKADDAHSTQRWIDAFQEGTVS 104 (109)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 79999999999999999999764
No 14
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.31 E-value=5.6e-12 Score=113.00 Aligned_cols=90 Identities=28% Similarity=0.342 Sum_probs=73.7
Q ss_pred cccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEe---------ccccceec
Q 004783 6 ITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVT---------DNGRESIH 76 (730)
Q Consensus 6 ~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~---------~~g~~~~h 76 (730)
-...+.++|||++.|.. ..-+++|||||+++.|.|||.+.+ ..|.+.+.+.+|+.++ .+.|++++
T Consensus 4 ~~~~~~~~G~L~K~g~~---~~~Wk~R~fvL~~~~L~yy~~~~~---~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~ 77 (118)
T 1v89_A 4 GSSGPIKMGWLKKQRSI---VKNWQQRYFVLRAQQLYYYKDEED---TKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIP 77 (118)
T ss_dssp SSSCEEEEEEEEEECSS---SSCEEEEEEEEETTEEEEESSSSC---CSCSEEECSTTEEEEEECCCSSCCCCCEEEEEE
T ss_pred CCCCCcEEEEEEecCCC---CCCccEEEEEEECCEEEEEeCCCC---CCceEEEECCCCEEEEcCcCcccCCcceEEEEC
Confidence 34567799999999753 234899999999999999998765 6899999999988753 22577765
Q ss_pred --------c----cccCCCHHHHHHHHHHHHHHHHhC
Q 004783 77 --------R----KLGASSPEEAAKWIHSLQEAALKG 101 (730)
Q Consensus 77 --------~----~~~a~~~e~a~~W~~a~~~a~~~~ 101 (730)
. .|.|.|.+|+..||.||+.|+...
T Consensus 78 ~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 114 (118)
T 1v89_A 78 ASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSG 114 (118)
T ss_dssp SCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred CccccccCCCcEEEEECCCHHHHHHHHHHHHHHHccC
Confidence 3 899999999999999999998843
No 15
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.31 E-value=3e-12 Score=117.25 Aligned_cols=91 Identities=23% Similarity=0.191 Sum_probs=74.5
Q ss_pred cccccccccceeEEEeeeccccccccceeeEEEecc---eeeecccCCCCCCCCCceeEEeecceEEe---------ccc
Q 004783 4 SQITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDH---FLKSFKSVPHSKNEDPVRSAIIDSCIRVT---------DNG 71 (730)
Q Consensus 4 ~~~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~---~l~~yk~~p~~~~~~P~~~~ii~~~~~v~---------~~g 71 (730)
++.+..+.+.|||++.+. +.+ +++|||||+++ .|+|||.+.+ ..|++++.+.||++.. .+-
T Consensus 2 ~~~~~~~~~~G~L~k~~~---~~~-WkkrWfVL~~~~~~~Ly~Yk~~~d---~~p~g~I~L~g~~V~~~~~~~~~~~~~~ 74 (112)
T 2coc_A 2 SSGSSGSLLCGPLRLSES---GET-WSEVWAAIPMSDPQVLHLQGGSQD---GRLPRTIPLPSCKLSVPDPEERLDSGHV 74 (112)
T ss_dssp CSCCSSSSSEEEEEEESS---SSC-EEEEEEECCTTCTTCEEEECCTTC---SSSCSEECGGGCEEECCCSSSCCSSSEE
T ss_pred CcccCCceEEEEEEecCC---CCC-ceEEEEEEECCCccEEEEECCCCc---cCcceEEEcCCCEEEecCcccccCCCCE
Confidence 456778889999999542 444 89999999996 7999997765 6899999999998762 234
Q ss_pred cceecc----cccCCCHHHHHHHHHHHHHHHHhC
Q 004783 72 RESIHR----KLGASSPEEAAKWIHSLQEAALKG 101 (730)
Q Consensus 72 ~~~~h~----~~~a~~~e~a~~W~~a~~~a~~~~ 101 (730)
|++.|. .|+|.|.|+|.+||++|+.|+...
T Consensus 75 Fki~~~~~~y~f~A~s~e~~~~Wl~al~~A~~~~ 108 (112)
T 2coc_A 75 WKLQWAKQSWYLSASSAELQQQWLETLSTAAHSG 108 (112)
T ss_dssp EEEEETTEEEEEEESSHHHHHHHHHHHHHHHSCC
T ss_pred EEEecCCeEEEEEcCCHHHHHHHHHHHHHHhcCC
Confidence 777766 999999999999999999997643
No 16
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.30 E-value=7e-12 Score=110.45 Aligned_cols=89 Identities=15% Similarity=0.190 Sum_probs=72.7
Q ss_pred ccccceeEEEeeec-cccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec----------cccceecc
Q 004783 9 QGRMEGWLHLIRSN-RIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD----------NGRESIHR 77 (730)
Q Consensus 9 ~~~~eGwl~~~g~~-~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~----------~g~~~~h~ 77 (730)
.+.++|||++.|.. ++...-+++|||||+++.|.|||.+.+ ..|.+.+.+++|+.+.. ++|++.+.
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~---~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~ 78 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKS---KQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQ 78 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTC---SSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECS
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCC---CCCCEEEEecceEEEeCCccccccCCcceEEEEcC
Confidence 46799999999975 333356899999999999999997665 68999999999996442 34665443
Q ss_pred -----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 -----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 -----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|.+|+..|+.||+.|+..
T Consensus 79 ~~r~~~l~a~s~~e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 79 DRRTYEFTATSPAEARDWVDQISFLLKD 106 (108)
T ss_dssp SSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 79999999999999999999863
No 17
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.30 E-value=4.6e-12 Score=113.78 Aligned_cols=89 Identities=16% Similarity=0.169 Sum_probs=73.5
Q ss_pred cccccccceeEEEeeeccccccccceeeEEEe--cceeeecccCCCCCCCCCceeEEeecceEEec--------------
Q 004783 6 ITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLE--DHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD-------------- 69 (730)
Q Consensus 6 ~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~--g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~-------------- 69 (730)
....+.++|||++.|.. ..-+++|||||+ ++.|.|||.+.+ ..|.+.+.+.+++.|+.
T Consensus 4 ~~~~~~~~G~L~K~g~~---~~~Wk~R~fvL~~~~~~L~yy~~~~~---~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~ 77 (117)
T 1v5u_A 4 GSSGRSYEGILYKKGAF---MKPWKARWFVLDKTKHQLRYYDHRMD---TECKGVIDLAEVEAVAPGTPTIGAPKTVDEK 77 (117)
T ss_dssp SCCSSSEEEEEEECCCS---SSCCEEEEEEEETTTTEEEEESSSSC---SSCCCEEEGGGEEEEECCCCCTTSCSSSCTT
T ss_pred CcCCccEEEEEEecCCC---CCCceeeEEEEECCCCEEEEeecCCC---CccceEEEccCcEEEeecCccccccccCCCC
Confidence 45667799999999864 345899999999 889999997765 67999999999988762
Q ss_pred cccceecc----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 70 NGRESIHR----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 70 ~g~~~~h~----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
+.|++... .|.|.|.+|+.+||.||+.|+.+
T Consensus 78 ~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 112 (117)
T 1v5u_A 78 AFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSS 112 (117)
T ss_dssp TCEEEEESSCEEEEECSSHHHHHHHHHHHHTTCCC
T ss_pred eEEEEECCCceEEEECCCHHHHHHHHHHHHHHhcc
Confidence 35666433 89999999999999999999764
No 18
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.30 E-value=6e-12 Score=112.89 Aligned_cols=87 Identities=14% Similarity=0.121 Sum_probs=72.2
Q ss_pred cccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEe--------ccccceecc--
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVT--------DNGRESIHR-- 77 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~--------~~g~~~~h~-- 77 (730)
..+.++|||++.|.. ..-+++|||||+++.|.|||.+.+ ..|.+.+-+.+++.++ .++|++.+.
T Consensus 3 ~~~~~~G~L~K~g~~---~~~Wk~R~fvL~~~~L~yy~~~~~---~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~ 76 (113)
T 1pls_A 3 PKRIREGYLVKKGSV---FNTWKPMWVVLLEDGIEFYKKKSD---NSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQ 76 (113)
T ss_dssp CCCSEEEEEEEESSS---SSCCEEEEEEEETTEEEEESSTTC---SSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTT
T ss_pred CCCcEEEEEEEeCCC---CCCceEEEEEEECCEEEEEeCCCC---CCcceEEEcCCCEEEEecCCCCCCccEEEEEcCCC
Confidence 356799999998763 334799999999999999997754 7899999999999865 124666543
Q ss_pred ---cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 ---KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 ---~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|.+|+.+||.||+.|+..
T Consensus 77 r~~~l~a~s~~e~~~Wi~ai~~~~~~ 102 (113)
T 1pls_A 77 QDHFFQAAFLEERDAWVRDINKAIKC 102 (113)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 79999999999999999999984
No 19
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.30 E-value=5.3e-12 Score=116.87 Aligned_cols=86 Identities=24% Similarity=0.383 Sum_probs=68.7
Q ss_pred cccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEe--c-----------cccc-ee
Q 004783 10 GRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVT--D-----------NGRE-SI 75 (730)
Q Consensus 10 ~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~--~-----------~g~~-~~ 75 (730)
+.++|||++.|. +.. .+++|||||++++|.|||.+....+..|++++.+.+|+... + .+++ ++
T Consensus 6 ~~k~G~L~Kk~~--~~k-~W~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i 82 (120)
T 4a6h_A 6 EIKSGFLERRSK--FLK-SYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVL 82 (120)
T ss_dssp CSEEEEEEEEET--TTT-EEEEEEEEECSSEEEEESSCCTTTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEE
T ss_pred ccEEEEEEEcCC--CCC-CCccEEEEEeCCEEEEEcCCCcCcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEE
Confidence 779999999886 333 46999999999999999987754457899999999998854 1 2222 11
Q ss_pred c--------c----cccCCCHHHHHHHHHHHHHHH
Q 004783 76 H--------R----KLGASSPEEAAKWIHSLQEAA 98 (730)
Q Consensus 76 h--------~----~~~a~~~e~a~~W~~a~~~a~ 98 (730)
+ + .|.|.|++||++||+||+.|+
T Consensus 83 ~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 83 HAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp EESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred EeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 1 1 899999999999999999984
No 20
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=8.4e-12 Score=113.85 Aligned_cols=92 Identities=16% Similarity=0.205 Sum_probs=74.5
Q ss_pred ccccccccceeEEEeeeccccccccceeeEEEecc--eeeecccCCCCCCCCCceeEEeecceEEec-----cccceecc
Q 004783 5 QITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDH--FLKSFKSVPHSKNEDPVRSAIIDSCIRVTD-----NGRESIHR 77 (730)
Q Consensus 5 ~~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~--~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~-----~g~~~~h~ 77 (730)
--..++.++|||++.|..... .-+++|||||+++ .|.|||.+.+ ..|.+.+-|.+++.+.+ +.|++...
T Consensus 3 s~~~~~~~~G~L~K~g~~~~~-k~WkkRwfvL~~~~~~L~Yy~~~~~---~~~~g~I~L~~~~~~~~~~~~~~~F~i~~~ 78 (119)
T 2dhk_A 3 SGSSGKKLCGYLSKFGGKGPI-RGWKSRWFFYDERKCQLYYSRTAQD---ANPLDSIDLSSAVFDCKADAEEGIFEIKTP 78 (119)
T ss_dssp CSCSCCCCEEEEEECSCSSSS-CCCEEEEEEEETTTTEEEEESSTTC---CSCSEEEEGGGCEEEECTTGGGCEEEEECS
T ss_pred CCCCCCcEEEEEEecCCCCCC-CCceeEEEEEECCccEEEEECCCCC---cccccEEECCCCEEEecCCCCCCEEEEEeC
Confidence 345677899999999863222 3479999999999 9999997765 68999999999998754 24565444
Q ss_pred ----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 ----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 ----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|.+|+.+||.||+.|+.+
T Consensus 79 ~r~~~l~a~s~~e~~~Wi~al~~~~~~ 105 (119)
T 2dhk_A 79 SRVITLKAATKQAMLYWLQQLQMKRWE 105 (119)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999873
No 21
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.29 E-value=1e-12 Score=121.40 Aligned_cols=89 Identities=16% Similarity=0.179 Sum_probs=65.0
Q ss_pred ccccceeEEEeeeccccccccceeeEEEecceeeecccCCCC-CCCCC-----ceeEEeecceEEe--c------cccce
Q 004783 9 QGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHS-KNEDP-----VRSAIIDSCIRVT--D------NGRES 74 (730)
Q Consensus 9 ~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~-~~~~P-----~~~~ii~~~~~v~--~------~g~~~ 74 (730)
.+.+||||++.|.. ...+++|||||+++.|+|||.++.. ....| .+++-+.+|+.+. + +.|+|
T Consensus 11 ~~~k~G~L~K~g~~---~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I 87 (124)
T 2w2x_D 11 EHKQQGELYMWDSI---DQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVFIL 87 (124)
T ss_dssp --CCEEEEEEEETT---TTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBTTBSEEEEE
T ss_pred hcceeEEEEEECCC---CCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccCCcCCCCEEEEE
Confidence 56799999998852 4568999999999999999986431 11233 4555577887632 2 23666
Q ss_pred ecc-------cccCCCHHHHHHHHHHHHHHHHh
Q 004783 75 IHR-------KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 75 ~h~-------~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.+. .|+|.|+||+.+||+||+.|+..
T Consensus 88 ~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~ 120 (124)
T 2w2x_D 88 EPKQQGDPPVEFATDKVEELFEWFQSIREITWK 120 (124)
T ss_dssp EECC--CCCEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred ECCCCCCceEEEEECCHHHHHHHHHHHHHHHHh
Confidence 542 68999999999999999999874
No 22
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.28 E-value=2.4e-12 Score=112.13 Aligned_cols=85 Identities=15% Similarity=0.179 Sum_probs=68.8
Q ss_pred cccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEeccc----cceecc----cccC
Q 004783 10 GRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDNG----RESIHR----KLGA 81 (730)
Q Consensus 10 ~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~~g----~~~~h~----~~~a 81 (730)
|.++|||++.|.. -.. +++|||||+++.|.||+.+.+.. ..|++.+.+.+|..+.+.+ |+++++ .|.|
T Consensus 1 V~k~G~L~K~g~~--~k~-WkkR~FvL~~~~L~Yy~~~~~~~-~~~~~~i~l~~~~~~~~~~~~~~F~i~~~~r~~~l~A 76 (94)
T 2rsg_A 1 VERCGVLSKWTNY--IHG-WQDRWVVLKNNALSYYKSEDETE-YGCRGSICLSKAVITPHDFDECRFDISVNDSVWYLRA 76 (94)
T ss_dssp CCEEEEEEEESSS--TTC-EEEEEEEEETTEEEEESSTTGGG-TCCSEEEETTTCEEEECSSCSSEEEEEETTEEEEEEC
T ss_pred CCEEEEEEEeCCC--CCC-ceEEEEEEECCEEEEEEeccccc-ccceeeEecceeeeecCcccceeEEEEeCCeEEEEEC
Confidence 5689999998853 233 79999999999999999766532 5788998898888866554 455444 8999
Q ss_pred CCHHHHHHHHHHHHHHH
Q 004783 82 SSPEEAAKWIHSLQEAA 98 (730)
Q Consensus 82 ~~~e~a~~W~~a~~~a~ 98 (730)
.|.+|+..||+||++|.
T Consensus 77 ~s~~e~~~Wi~aLq~Ak 93 (94)
T 2rsg_A 77 QDPDHRQQWIDAIEQHK 93 (94)
T ss_dssp CSSCCTHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhhc
Confidence 99999999999999983
No 23
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.27 E-value=9.3e-12 Score=113.08 Aligned_cols=88 Identities=25% Similarity=0.381 Sum_probs=72.9
Q ss_pred cccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec----------cccceecc
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD----------NGRESIHR 77 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~----------~g~~~~h~ 77 (730)
..+.++|||++.|.. ..-+++|||||+++.|.|||.+.+ ..|.+.+-+++++.|+. +.|++...
T Consensus 12 ~~~~~~G~L~K~g~~---~~~Wk~R~fvL~~~~L~yy~~~~~---~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~ 85 (125)
T 1eaz_A 12 SAVIKAGYCVKQGAV---MKNWKRRYFQLDENTIGYFKSELE---KEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTT 85 (125)
T ss_dssp CCCSEEEEEEEECTT---TCCEEEEEEEECSSEEEEESSTTC---SSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECS
T ss_pred CCccEEEEEEEeCCC---CCCcceEEEEEeCCEEEEEcCCCC---CcceeEEEcccceEEeeccccccCCcCCEEEEEeC
Confidence 456699999998752 334799999999999999997765 68999999999887654 34666554
Q ss_pred ----cccCCCHHHHHHHHHHHHHHHHhC
Q 004783 78 ----KLGASSPEEAAKWIHSLQEAALKG 101 (730)
Q Consensus 78 ----~~~a~~~e~a~~W~~a~~~a~~~~ 101 (730)
.|.|.|.+|+.+||.||+.|+...
T Consensus 86 ~r~~~l~a~s~~e~~~W~~al~~~i~~~ 113 (125)
T 1eaz_A 86 SRTFYVQADSPEEMHSWIKAVSGAIVAQ 113 (125)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999853
No 24
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.26 E-value=8.7e-12 Score=116.15 Aligned_cols=92 Identities=18% Similarity=0.267 Sum_probs=70.2
Q ss_pred cccccccceeEEEeeeccccccccceeeEEEe---cceeeecccCCC-CCCCCCceeEEeecceEEecc----------c
Q 004783 6 ITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLE---DHFLKSFKSVPH-SKNEDPVRSAIIDSCIRVTDN----------G 71 (730)
Q Consensus 6 ~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~---g~~l~~yk~~p~-~~~~~P~~~~ii~~~~~v~~~----------g 71 (730)
++....++|||++.|... ..-+++|||||+ |++|.|||..-+ ...++|++++.+++|+.|... .
T Consensus 11 ~~~~~~~~G~L~K~g~~~--~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~ 88 (126)
T 1v5p_A 11 VDRQNRICGFLDIEDNEN--SGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFC 88 (126)
T ss_dssp CCCCCCEECCEEEECTTC--SSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSE
T ss_pred ecCCCceEEEEEEeCCCC--CCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCCCCCEE
Confidence 344556899999998543 345899999999 889988886311 123799999999997777542 3
Q ss_pred cceecc----cccCCCHHHHHHHHHHHHHHHH
Q 004783 72 RESIHR----KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 72 ~~~~h~----~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
|.++-+ .|.|.|++|+..||+||..|+.
T Consensus 89 F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 89 FVINALSQRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp EEEECSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred EEEECCCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence 433332 8999999999999999999966
No 25
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.26 E-value=1e-11 Score=119.14 Aligned_cols=90 Identities=16% Similarity=0.086 Sum_probs=71.9
Q ss_pred cccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec--------cccceecc--
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD--------NGRESIHR-- 77 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~--------~g~~~~h~-- 77 (730)
.++.+||||++.|.. ...+++|||||+|+.|.|||.+.+ ..|.+.+-|.+++.+++ +.|+++..
T Consensus 16 ~pv~keG~L~Kkg~~---~k~WkrRWFvLk~~~L~Yyk~~~d---~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r 89 (149)
T 1x1f_A 16 LPLYFEGFLLIKRSG---YREYEHYWTELRGTTLFFYTDKKS---IIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKE 89 (149)
T ss_dssp SCEEEEEEEEEECTT---CCSCEEEEEEEETTEEEEESCSSC---SSCSEECCCSSCCEEEECCCTTSCCCEEEEECSSC
T ss_pred CCccEEEEEEEeCCC---CCCceeEEEEEcCCEEEEEeCCCc---cccCcEEECCCceEEeeccCCCCcCcEEEEEcCCC
Confidence 346799999999953 356899999999999999998776 67888887888877632 23555433
Q ss_pred --cccCCCHHHHHHHHHHHHHHHHhCCC
Q 004783 78 --KLGASSPEEAAKWIHSLQEAALKGGP 103 (730)
Q Consensus 78 --~~~a~~~e~a~~W~~a~~~a~~~~~~ 103 (730)
.|.|.|.||++.||+||+.++....|
T Consensus 90 ~~~f~A~s~ee~~eWi~aI~~v~~~~~p 117 (149)
T 1x1f_A 90 EVQLKTENTESGEEWRGFILTVTELSVP 117 (149)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHHHSSCC
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHcccCC
Confidence 89999999999999999999885444
No 26
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=9.9e-12 Score=111.27 Aligned_cols=89 Identities=15% Similarity=0.170 Sum_probs=71.7
Q ss_pred cccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec--------cccceecc
Q 004783 6 ITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD--------NGRESIHR 77 (730)
Q Consensus 6 ~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~--------~g~~~~h~ 77 (730)
-...+.++|||++.|. +..-+++|||||+++.|.|||.+.+ ..|.+.+.+++++.|+. +.|++.+.
T Consensus 4 ~~~~~~~~G~L~K~~~---~~~~Wk~R~fvL~~~~L~yy~~~~~---~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~ 77 (115)
T 2dn6_A 4 GSSGVLKQGYMMKKGH---RRKNWTERWFVLKPNIISYYVSEDL---KDKKGDILLDENCCVESLPDKDGKKCLFLVKCF 77 (115)
T ss_dssp CCCSCSEEEEEEEECT---TSSCEEEEEEEECSSCEEEESSTTC---SSEEEEECCCTTCEEEEECCCTTCCSEEEEECS
T ss_pred CCCCceEEEEEEecCC---CCCCcEEeEEEEECCEEEEeCCCCC---cccCcEEEecCcEEEEECCCCCCCeeEEEEEeC
Confidence 3456779999999886 2344899999999999999997654 68889888998766532 23555444
Q ss_pred ----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 ----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 ----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|.+|+.+||.||+.|+..
T Consensus 78 ~r~~~l~a~s~~e~~~Wi~ai~~~~~~ 104 (115)
T 2dn6_A 78 DKTFEISASDKKKKQEWIQAIHSTIHL 104 (115)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999874
No 27
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.25 E-value=1.3e-11 Score=109.39 Aligned_cols=87 Identities=25% Similarity=0.403 Sum_probs=69.7
Q ss_pred cccccccceeEEEeeeccccccccceeeEEEecc--eeeecccCCCCCCCCCceeEEeecceEE--e----------ccc
Q 004783 6 ITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDH--FLKSFKSVPHSKNEDPVRSAIIDSCIRV--T----------DNG 71 (730)
Q Consensus 6 ~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~--~l~~yk~~p~~~~~~P~~~~ii~~~~~v--~----------~~g 71 (730)
....+.++|||++.|.. ..-+++|||||+++ .|.|||.+.+ ..|.+.+-+++|+.+ + .+.
T Consensus 3 ~~~~~~~~G~L~K~g~~---~~~Wk~R~fvL~~~~~~L~yyk~~~~---~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~ 76 (109)
T 2i5f_A 3 FTGVIIKQGCLLKQGHR---RKNWKVRKFILREDPAYLHYYDPAGA---EDPLGAIHLRGCVVTSVESNSNGRKSEEENL 76 (109)
T ss_dssp CCCCEEEEEEEEEECTT---TCCEEEEEEEEETTTTEEEEECTTSC---SSCSEEEECTTCEEEEECC--------CCSE
T ss_pred ccCceeEEEEEEEcCCC---CCCceEEEEEEeCCCcEEEEECCCCC---CCccEEEECCCCEEEEccCCcccccCCCceE
Confidence 34567899999998763 23379999999987 9999987644 789999999998753 2 245
Q ss_pred cceecc-----cccCCCHHHHHHHHHHHHHHH
Q 004783 72 RESIHR-----KLGASSPEEAAKWIHSLQEAA 98 (730)
Q Consensus 72 ~~~~h~-----~~~a~~~e~a~~W~~a~~~a~ 98 (730)
|++.+. .|.|.|.+|+.+||.||+.|+
T Consensus 77 F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 77 FEIITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp EEEECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 666443 799999999999999999996
No 28
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.25 E-value=1.4e-11 Score=112.49 Aligned_cols=91 Identities=21% Similarity=0.298 Sum_probs=71.3
Q ss_pred ccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec---------cccceecc
Q 004783 7 TSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD---------NGRESIHR 77 (730)
Q Consensus 7 ~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~---------~g~~~~h~ 77 (730)
..++.++|||++.|...+ .-+++|||||+++.|.|||.+.+ ..|.+.+.|.+|..... +.|++.+.
T Consensus 18 ~~~~~~~G~L~K~~~~~~--~~Wk~R~fvL~~~~L~yy~~~~~---~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~ 92 (128)
T 2dkp_A 18 NAPVVRRGWLYKQDSTGM--KLWKKRWFVLSDLCLFYYRDEKE---EGILGSILLPSFQIALLTSEDHINRKYAFKAAHP 92 (128)
T ss_dssp TSCCCEEEEEEEECCSSS--CCEEEEEEEEETTEEEEESSTTC---CSEEEEECGGGSEEEECCGGGCCSSCSEEEEECS
T ss_pred CCCcEEEEEEEEeCCCCC--CCceeEEEEEeCCEEEEECCCCC---cccceEEEcCceEEEEcCCcccCCCCeEEEEEcC
Confidence 345569999999987433 34899999999999999997665 68888888888765321 13666543
Q ss_pred -----cccCCCHHHHHHHHHHHHHHHHhCC
Q 004783 78 -----KLGASSPEEAAKWIHSLQEAALKGG 102 (730)
Q Consensus 78 -----~~~a~~~e~a~~W~~a~~~a~~~~~ 102 (730)
.|.|.|.+|+.+|+.||+.|+..+.
T Consensus 93 ~~r~~~l~a~s~~e~~~Wi~al~~a~~~~~ 122 (128)
T 2dkp_A 93 NMRTYYFCTDTGKEMELWMKAMLDAALVQT 122 (128)
T ss_dssp SSCCEEEECSSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHHHHhccC
Confidence 8999999999999999999987443
No 29
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.25 E-value=1.6e-11 Score=112.24 Aligned_cols=89 Identities=27% Similarity=0.313 Sum_probs=72.8
Q ss_pred cccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec-------cccceecc-
Q 004783 6 ITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD-------NGRESIHR- 77 (730)
Q Consensus 6 ~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~-------~g~~~~h~- 77 (730)
.++.+.++|||++.|. ...-+++|||||+++.|.|||.+.+ ..|.+.+-+.+|..|+. +.|++.+.
T Consensus 14 ~~~~~~~~G~L~K~g~---~~~~Wk~R~fvL~~~~L~yy~~~~~---~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~ 87 (126)
T 1fao_A 14 APSLGTKEGYLTKQGG---LVKTWKTRWFTLHRNELKYFKDQMS---PEPIRILDLTECSAVQFDYSQERVNCFCLVFPF 87 (126)
T ss_dssp -CCTTCEEEEEEEECS---SSCCEEEEEEEEETTEEEEESSTTC---SSCSEEEEGGGCCEEEEECSSSSSSEEEEEETT
T ss_pred CCCCccEEEEEEEcCC---CCCCcccEEEEEECCEEEEeCCCCC---CCceeEEEccceEEEEecccCCCCCEEEEEeCC
Confidence 3456679999999885 2334799999999999999997665 68999999999987543 24666544
Q ss_pred ---cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 ---KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 ---~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|.+|+..|+.||+.|+.+
T Consensus 88 r~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 88 RTFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999885
No 30
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=2.1e-11 Score=109.50 Aligned_cols=89 Identities=28% Similarity=0.353 Sum_probs=71.1
Q ss_pred ccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEe--c-------cccceecc
Q 004783 7 TSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVT--D-------NGRESIHR 77 (730)
Q Consensus 7 ~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~--~-------~g~~~~h~ 77 (730)
..++.++|||++.|.+. ..-+++|||||+++.|.|||.+.+ ..|.+.+-+++|+... . +.|++.+.
T Consensus 8 ~~~~~~~G~L~K~~~~~--~~~Wk~R~fvL~~~~L~yy~~~~~---~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~ 82 (117)
T 2d9y_A 8 NAPVTKAGWLFKQASSG--VKQWNKRWFVLVDRCLFYYKDEKE---ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHA 82 (117)
T ss_dssp SCCCCEEEEEEEECTTS--SSCEEEEEEEEETTEEEEESSTTC---CSCCEEEECSSCEEEECCTTTTCCCSSEEEEECS
T ss_pred CCCeeEEEEEEEeCCCC--CCCceEEEEEECCCEEEEECCCCC---CCcCCEEEeCCeEEEEcCccccCCCccEEEEEcC
Confidence 34567999999998543 345899999999999999997655 6899999999887521 1 14666443
Q ss_pred -----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 -----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 -----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|.+|+.+|+.||+.|+..
T Consensus 83 ~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 110 (117)
T 2d9y_A 83 GVRTYFFSAESPEEQEAWIQAMGEAARV 110 (117)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHTTCC
T ss_pred CCcEEEEEcCCHHHHHHHHHHHHHHHhh
Confidence 89999999999999999999763
No 31
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=1.7e-11 Score=110.98 Aligned_cols=86 Identities=30% Similarity=0.381 Sum_probs=69.3
Q ss_pred ccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceE--Eec-------cccceecc--
Q 004783 9 QGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIR--VTD-------NGRESIHR-- 77 (730)
Q Consensus 9 ~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~--v~~-------~g~~~~h~-- 77 (730)
++.++|||++.|.+.+ .-+++|||||+++.|.|||.+.+ ..|.+.+-+++|+. ++. ++|++.+.
T Consensus 21 ~~~~~G~L~K~~~~~~--~~Wk~R~fvL~~~~L~yy~~~~~---~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~ 95 (122)
T 2yry_A 21 PVTKAGWLFKQASSGV--KQWNKRWFVLVDRCLFYYKDEKE---ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGV 95 (122)
T ss_dssp CEEEEEEEEEECCSSS--CCEEEEEEEEETTEEEEESSTTC---CSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSS
T ss_pred CccEEEEEEEECCCCC--CCcEEEEEEEeCCEEEEECCCCC---CCcccEEEcCCCEEEEcCccccCCcccEEEEecCCC
Confidence 4569999999985433 45899999999999999997765 68999999998863 211 24666443
Q ss_pred ---cccCCCHHHHHHHHHHHHHHHH
Q 004783 78 ---KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 78 ---~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
.|.|.|.+|+.+||.||+.|+.
T Consensus 96 r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 96 RTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999975
No 32
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.23 E-value=2.4e-11 Score=110.26 Aligned_cols=88 Identities=25% Similarity=0.391 Sum_probs=70.1
Q ss_pred cccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec---------cccceecc-
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD---------NGRESIHR- 77 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~---------~g~~~~h~- 77 (730)
+++.++|||++.|.+.+ ..+++|||||+++.|.|||.+.+ ..|.+.+.+.+|..... +.+++.+.
T Consensus 9 ~~~~~~G~L~K~~~~~~--~~WkkR~fvL~~~~L~yy~~~~~---~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~ 83 (123)
T 1upq_A 9 LPVHIRGWLHKQDSSGL--RLWKRRWFVLSGHCLFYYKDSRE---ESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPG 83 (123)
T ss_dssp SCEEEEEEEEEECSSSS--CCEEEEEEEEETTEEEEESSTTC---CSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTT
T ss_pred CCceEEEEEEeeCCCCC--CCceeEEEEEeCCEEEEECCCCC---cccceEEECCCCEEEECCCCccCCCcEEEEEECCC
Confidence 45679999999986443 45899999999999999997665 68999988888876432 22444332
Q ss_pred ----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 ----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 ----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|.+|+..|+.||+.|+..
T Consensus 84 ~r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 84 MRTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred CeEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999863
No 33
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.23 E-value=2.4e-11 Score=111.43 Aligned_cols=89 Identities=25% Similarity=0.403 Sum_probs=71.1
Q ss_pred ccccccceeEEEeeeccccccccceeeEEEecc--eeeecccCCCCCCCCCceeEEeecceEEe------------cccc
Q 004783 7 TSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDH--FLKSFKSVPHSKNEDPVRSAIIDSCIRVT------------DNGR 72 (730)
Q Consensus 7 ~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~--~l~~yk~~p~~~~~~P~~~~ii~~~~~v~------------~~g~ 72 (730)
...+.++|||++.|.. ..-+++|||||+++ .|.|||.+.+ ..|.+.+-+.+|..+. .+.|
T Consensus 15 ~~~~~~~G~L~K~g~~---~~~Wk~R~fvL~~~~~~L~yy~~~~~---~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F 88 (129)
T 1x05_A 15 RGVIIKQGCLLKQGHR---RKNWKVRKFILREDPAYLHYYDPAGA---EDPLGAIHLRGCVVTSVESNSNGRKSEEENLF 88 (129)
T ss_dssp CSEEEEEEEEEECCSS---CCCCEEEEEEEEETTTEEEEECSSCC---SSCSEEEECTTCEEEECCCCCCSSSCSSCSEE
T ss_pred cCCceEEEEEEecCCC---CCCCeeEEEEEeCCCCEEEEECCCCC---CcceeEEEccCCEEEEccCCccccccCCCeEE
Confidence 4556699999998763 23379999999987 8999997644 7899999999987642 2346
Q ss_pred ceecc-----cccCCCHHHHHHHHHHHHHHHHhC
Q 004783 73 ESIHR-----KLGASSPEEAAKWIHSLQEAALKG 101 (730)
Q Consensus 73 ~~~h~-----~~~a~~~e~a~~W~~a~~~a~~~~ 101 (730)
++.+. .|.|.|.+|+.+||.||+.|+...
T Consensus 89 ~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 122 (129)
T 1x05_A 89 EIITADEVHYFLQAATPKERTEWIKAIQMASRTG 122 (129)
T ss_dssp EEECTTCCCCEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred EEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHcc
Confidence 66443 899999999999999999998743
No 34
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.21 E-value=1e-11 Score=114.45 Aligned_cols=92 Identities=20% Similarity=0.371 Sum_probs=71.9
Q ss_pred ccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceE--Eec---------ccccee
Q 004783 7 TSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIR--VTD---------NGRESI 75 (730)
Q Consensus 7 ~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~--v~~---------~g~~~~ 75 (730)
.+.+.++|||++.+.. -+..-+++|||||+++.|.|||...+.....|++++.+.+|+. |+. +.|+++
T Consensus 2 ~~~v~~~G~L~K~~~~-~~~~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~ 80 (134)
T 2y7b_A 2 NSSVEERGFLTIFEDV-SGFGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANREFCARRNTFELI 80 (134)
T ss_dssp CCCCCEEEEEEEEEEE-TTEEEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEE
T ss_pred CCCceEEeeEEEEcCC-CCCCCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCccccccccchhhccCCCEEEEE
Confidence 3567899999998321 1344689999999999999999665544479999999999873 332 246665
Q ss_pred c------------------------ccccCCCHHHHHHHHHHHHHHHH
Q 004783 76 H------------------------RKLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 76 h------------------------~~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
+ -.|.|.|.+|+..||.||+.|+.
T Consensus 81 ~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~ 128 (134)
T 2y7b_A 81 TVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLV 128 (134)
T ss_dssp EEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHH
Confidence 4 17999999999999999999986
No 35
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.21 E-value=3.7e-11 Score=109.24 Aligned_cols=88 Identities=24% Similarity=0.439 Sum_probs=70.1
Q ss_pred cccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEe--c----cccceec-----
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVT--D----NGRESIH----- 76 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~--~----~g~~~~h----- 76 (730)
..+.++|||++.|.. ..-+++|||||+++.|.|||.+.+ ..|.+.+-+++|+.++ + +.|++.+
T Consensus 3 ~~~~~~G~L~K~g~~---~~~Wk~R~fvL~~~~L~yy~~~~~---~~~~g~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~ 76 (127)
T 1fgy_A 3 FNPDREGWLLKLGGR---VKTWKRRWFILTDNCLYYFEYTTD---KEPRGIIPLENLSIREVLDPRKPNCFELYNPSHKG 76 (127)
T ss_dssp SSCSEEEEEEEECSS---SCCEEEEEEEEETTEEEEESSTTC---SSCSEEEECTTCEEEEECCSSCSSEEEEECSSSTT
T ss_pred CCCceEeEEEEECCC---CCCeEEEEEEEECCEEEEeCCCCC---CCcceEEECCceEEEEccCCCCCceEEEecCCccc
Confidence 356799999999864 234899999999999999997654 6899999999987643 2 2344431
Q ss_pred -------------------c--cccCCCHHHHHHHHHHHHHHHHhC
Q 004783 77 -------------------R--KLGASSPEEAAKWIHSLQEAALKG 101 (730)
Q Consensus 77 -------------------~--~~~a~~~e~a~~W~~a~~~a~~~~ 101 (730)
. .|.|.|.+|+.+||.||+.|+...
T Consensus 77 ~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 122 (127)
T 1fgy_A 77 QVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 122 (127)
T ss_dssp CCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred cccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhccC
Confidence 1 699999999999999999998853
No 36
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.21 E-value=1.7e-11 Score=109.57 Aligned_cols=89 Identities=18% Similarity=0.256 Sum_probs=67.7
Q ss_pred cccccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecc-eEEec-----cccceecc
Q 004783 4 SQITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSC-IRVTD-----NGRESIHR 77 (730)
Q Consensus 4 ~~~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~-~~v~~-----~g~~~~h~ 77 (730)
|.-...+.++|||++. +..-+++|||||+++.|.|||.+.+ ...|...+.+.+| +.+.+ +.|++.+.
T Consensus 2 s~~~~~~~~~G~L~K~-----~~k~Wk~RwfvL~~~~L~yyk~~~~--~~~~~~~i~l~~~~v~~~~~~~~~~~F~i~~~ 74 (107)
T 2cof_A 2 SSGSSGLETSSYLNVL-----VNSQWKSRWCSVRDNHLHFYQDRNR--SKVAQQPLSLVGCEVVPDPSPDHLYSFRILHK 74 (107)
T ss_dssp CCCCCCCTTCCEEEEE-----ETTEEEEEEEEECSSCEEEECSSTT--CSEEEEEECTTTCEEECCCBTTBSCEEEEEET
T ss_pred CCCCCCCcEeEEEEEe-----cCCCcceEEEEEECCEEEEEeCCcc--cCCCeeEEeccceEEEECCCCCCCeEEEEEeC
Confidence 4456778899999997 3445899999999999999998765 2456555556677 33322 34666433
Q ss_pred -----cccCCCHHHHHHHHHHHHHHHH
Q 004783 78 -----KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 78 -----~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
.|.|.|.+|+.+||.||+.|+.
T Consensus 75 ~~r~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 75 GEELAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp TEEEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 7999999999999999999955
No 37
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.21 E-value=1.4e-11 Score=114.34 Aligned_cols=87 Identities=20% Similarity=0.221 Sum_probs=70.4
Q ss_pred cccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceE--Eecc------ccceecc--
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIR--VTDN------GRESIHR-- 77 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~--v~~~------g~~~~h~-- 77 (730)
.+|..+|||.+... ++.+.=+++|||||.++.|+|||.+.+ ++|.+.+.+++.++ |++. -|+++|.
T Consensus 10 ~~VirkGWL~k~~~-g~~k~~wk~rWFVLt~~~L~yyKd~~e---ke~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~ 85 (125)
T 1dyn_A 10 ILVIRKGWLTINNI-GIMKGGSKEYWFVLTAENLSWYKDDEE---KEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQ 85 (125)
T ss_dssp CCEEEEEEEEESCC-CGGGTSSEEEEEEEESSEEEEESSTTC---SCEEEEEECTTEEEEECCSCSSSSCEEEEEEETTS
T ss_pred cceEEEEEEEEecC-ccccCCceeeEEEEeccceeeecCCcc---cccceEEECCCceEeccCCCCCCCceEEEEECCCC
Confidence 46899999999532 134433699999999999999998886 89999999999887 3341 3566653
Q ss_pred ----------cccCCCHHHHHHHHHHHHHHH
Q 004783 78 ----------KLGASSPEEAAKWIHSLQEAA 98 (730)
Q Consensus 78 ----------~~~a~~~e~a~~W~~a~~~a~ 98 (730)
.|+|.|+||++.||.||..|.
T Consensus 86 r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra~ 116 (125)
T 1dyn_A 86 RNVYKDYRQLELACETQEEVDSWKASFLRAG 116 (125)
T ss_dssp SCSSTTCSSEEEEESSHHHHHHHHHHHHHTT
T ss_pred ccccccceEEEEeCCCHHHHHHHHHHHHhCc
Confidence 899999999999999998884
No 38
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.20 E-value=2.5e-11 Score=114.56 Aligned_cols=90 Identities=27% Similarity=0.369 Sum_probs=73.4
Q ss_pred cccccceeEEEeeecc---ccccccceeeEEEecc-----eeeecccCCCCCCCCCceeEEeecceEEec------cccc
Q 004783 8 SQGRMEGWLHLIRSNR---IGLQYSRKRYFLLEDH-----FLKSFKSVPHSKNEDPVRSAIIDSCIRVTD------NGRE 73 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~---~g~~~~~~Ryfvl~g~-----~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~------~g~~ 73 (730)
..+.++|||++.|.++ .+..-+++|||||+++ .|.|||.+..+ ..|.+.+.|.+|+.+.. +.|+
T Consensus 16 ~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~--~~~~g~I~L~~~~~~~~~~~~~~~~F~ 93 (150)
T 1wg7_A 16 GGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKIS--KEPKGSIFLDSCMGVVQNNKVRRFAFE 93 (150)
T ss_dssp CCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCS--SCCSEEECTTTCCEECCCCSSCTTEEE
T ss_pred CCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCC--CCcCcEEecccCEEEecCCCCCceEEE
Confidence 5567999999998654 2445689999999997 99999987732 68999999999988653 2466
Q ss_pred eecc-----cccCCCHHHHHHHHHHHHHHHH
Q 004783 74 SIHR-----KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 74 ~~h~-----~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
+.+. .|.|.|.+|+..||.||+.|+.
T Consensus 94 i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~ 124 (150)
T 1wg7_A 94 LKMQDKSSYLLAADSEVEMEEWITILNKILQ 124 (150)
T ss_dssp EECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEeCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 5433 8999999999999999999986
No 39
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.20 E-value=2.4e-11 Score=107.17 Aligned_cols=85 Identities=20% Similarity=0.253 Sum_probs=66.4
Q ss_pred cceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEe----ccccceecc-----cccCC
Q 004783 12 MEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVT----DNGRESIHR-----KLGAS 82 (730)
Q Consensus 12 ~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~----~~g~~~~h~-----~~~a~ 82 (730)
|||||++.|... .-+++|||||+++.|.|||.+.+.. ..|.+.+-+.+|..+. .+.|++++. .|.|.
T Consensus 1 ~eG~L~K~g~~~---k~Wk~R~fvL~~~~L~Yy~~~~~~~-~~~~g~i~L~~~~v~~~~~~~~~F~i~~~~~r~~~l~a~ 76 (103)
T 3rcp_A 1 MEGVLYKWTNYL---TGWQPRWFVLDNGILSYYDSQDDVC-KGSKGSIKMAVCEIKVHSADNTRMELIIPGEQHFYMKAV 76 (103)
T ss_dssp CEEEEEEECCTT---TCEEEEEEEEETTEEEEESSCC----CCCSCEEEGGGCEEECCTTCSSEEEEEETTTEEEEEECS
T ss_pred CceEEEEccCCC---CCeeceEEEEECCEEEEEecCCccc-CCcccEEEeeeeEEEEcCCCCceEEEEeCCCCEEEEECC
Confidence 799999998642 2379999999999999999876422 4688888888777643 334666542 89999
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 004783 83 SPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 83 ~~e~a~~W~~a~~~a~~~ 100 (730)
|.+|+.+|++||+.|+..
T Consensus 77 s~~e~~~Wi~al~~a~~~ 94 (103)
T 3rcp_A 77 NAAERQRWLVALGSSKAS 94 (103)
T ss_dssp SHHHHHHHHHHHHTTSCC
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999999663
No 40
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=4.4e-11 Score=108.92 Aligned_cols=90 Identities=18% Similarity=0.272 Sum_probs=71.6
Q ss_pred ccccccceeEEEeeeccccccccceeeEEEec--ceeeecccCCCCCCCCCceeEEeecceEEec----cccceecc---
Q 004783 7 TSQGRMEGWLHLIRSNRIGLQYSRKRYFLLED--HFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD----NGRESIHR--- 77 (730)
Q Consensus 7 ~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g--~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~----~g~~~~h~--- 77 (730)
.+.+.++|||++.|. ...-+++|||||++ +.|.|||.+.+.. ..|.+.+-|.+|++..+ +.|++.+.
T Consensus 5 ~~~~~~~G~L~K~~~---~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~-~~~~g~I~L~~~~v~~~~~~~~~F~i~~~~~r 80 (120)
T 2d9x_A 5 SSGENVYGYLMKYTN---LVTGWQYRFFVLNNEAGLLEYFVNEQSRN-QKPRGTLQLAGAVISPSDEDSHTFTVNAASGE 80 (120)
T ss_dssp CSCCCCEEEEEEEEE---TTTEEEEEEEEECTTTCEEEEESSGGGSS-SCCSEEEECTTCCEECCSSSSSCEEECCSSSC
T ss_pred CCCCcEEEEEEecCC---CCCCceEEEEEEECCCCEEEEEecCcccC-CCccceEEcceEEEEecCCCCCEEEEEcCCCC
Confidence 456779999999985 22347999999995 7999999877532 47999999999876432 34666443
Q ss_pred --cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 --KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 --~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|.+|+.+||.||+.|+..
T Consensus 81 ~~~l~a~s~~e~~~Wi~al~~~~~~ 105 (120)
T 2d9x_A 81 QYKLRATDAKERQHWVSRLQICTQH 105 (120)
T ss_dssp CEEECCSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999873
No 41
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.19 E-value=2e-11 Score=109.27 Aligned_cols=85 Identities=20% Similarity=0.252 Sum_probs=64.0
Q ss_pred ccccceeEEEeeeccccccccceeeEEE-ecceeeecccCCCCCCCCCceeEEeecce-------EEe----------cc
Q 004783 9 QGRMEGWLHLIRSNRIGLQYSRKRYFLL-EDHFLKSFKSVPHSKNEDPVRSAIIDSCI-------RVT----------DN 70 (730)
Q Consensus 9 ~~~~eGwl~~~g~~~~g~~~~~~Ryfvl-~g~~l~~yk~~p~~~~~~P~~~~ii~~~~-------~v~----------~~ 70 (730)
.+.++|||++.|. +..-+++||||| +++.|.|||.+.+ ..|.+.+-+..++ .|+ .+
T Consensus 4 ~~~~~G~L~K~g~---~~k~WkkR~fvL~~~~~L~yyk~~~~---~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~ 77 (112)
T 3aj4_A 4 AFVKSGWLLRQST---ILKRWKKNWFDLWSDGHLIYYDDQTR---QNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDC 77 (112)
T ss_dssp SCSEEEEEEEECS---SSCCEEEEEEEECTTSEEEEESSTTC---CSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGG
T ss_pred ceeEEEEEEeeCC---CCCCeeceEEEEeeCCEEEEEcCCCC---CCCCccccccccceeecccccccccCCCCCCCcCc
Confidence 4679999999986 233589999999 9999999998775 4565555544433 221 23
Q ss_pred ccceecc-----cccCCCHHHHHHHHHHHHHHHH
Q 004783 71 GRESIHR-----KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 71 g~~~~h~-----~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
+|++.+. .|.|.|.+|+.+||+||+.|..
T Consensus 78 ~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 78 MLQIVCRDGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp EEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 5666532 7999999999999999999953
No 42
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.18 E-value=6.1e-11 Score=114.93 Aligned_cols=95 Identities=15% Similarity=0.166 Sum_probs=73.8
Q ss_pred ccccccccceeEEEeeecc--ccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEecc------------
Q 004783 5 QITSQGRMEGWLHLIRSNR--IGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDN------------ 70 (730)
Q Consensus 5 ~~~~~~~~eGwl~~~g~~~--~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~~------------ 70 (730)
-....+.+||||++.|.++ ++..-+++|||||+++.|.|||.+.+. ..|.+++-+..++.|+..
T Consensus 10 ~m~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~--~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~ 87 (164)
T 2lul_A 10 HMNFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEK--KYRKGFIDVSKIKCVEIVKNDDGVIPCQNK 87 (164)
T ss_dssp CCCSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSS--CCCCCEEEGGGCCEEEECCCCSSSCCSSSC
T ss_pred cCCCCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcc--cccccEEEEeeeEEEEeccccccCcccccc
Confidence 3445677999999998864 455568999999999999999976542 467777778877765431
Q ss_pred -ccceecc----cccCCCHHHHHHHHHHHHHHHHhC
Q 004783 71 -GRESIHR----KLGASSPEEAAKWIHSLQEAALKG 101 (730)
Q Consensus 71 -g~~~~h~----~~~a~~~e~a~~W~~a~~~a~~~~ 101 (730)
.+++++. .|.|.|.+|+.+||+||+.++...
T Consensus 88 ~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~n 123 (164)
T 2lul_A 88 YPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKNN 123 (164)
T ss_dssp SEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTTC
T ss_pred eeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHHC
Confidence 2445554 799999999999999999998853
No 43
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.18 E-value=4.2e-11 Score=108.66 Aligned_cols=86 Identities=22% Similarity=0.311 Sum_probs=66.3
Q ss_pred cceeEEEe-eeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecc-eE---Eec-----cccceecc----
Q 004783 12 MEGWLHLI-RSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSC-IR---VTD-----NGRESIHR---- 77 (730)
Q Consensus 12 ~eGwl~~~-g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~-~~---v~~-----~g~~~~h~---- 77 (730)
+||||.+. |.++.+..-+++|||||+|+.|.|||.+.+ ..|.+++-|.+. |. ..+ +.|++.+.
T Consensus 2 keG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~~---~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~ 78 (112)
T 3cxb_B 2 KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTD---VIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPC 78 (112)
T ss_dssp EEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSSC---CSCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCC
T ss_pred ceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCCC---CCccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCE
Confidence 79999966 555667788999999999999999997754 678877666543 22 222 34666532
Q ss_pred -cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 -KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 -~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|.|||..||+||..|+.+
T Consensus 79 y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 79 LELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTC
T ss_pred EEEEcCCHHHHHHHHHHHHHHhhc
Confidence 89999999999999999999874
No 44
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.17 E-value=4.7e-11 Score=112.65 Aligned_cols=90 Identities=19% Similarity=0.162 Sum_probs=72.4
Q ss_pred cccccceeEEEeeecc-ccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEe------c----cccceec
Q 004783 8 SQGRMEGWLHLIRSNR-IGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVT------D----NGRESIH 76 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~-~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~------~----~g~~~~h 76 (730)
..+.++|||++.|... +...-+++|||||+++.|.|||...+ ..|.+.+.+.+++.+. + ++|++..
T Consensus 15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~~---~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~ 91 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKD---KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICA 91 (148)
T ss_dssp SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTC---SSCSEEEECTTCEEEECTTSCSSTTGGGEEEEEC
T ss_pred CCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCCC---cccceEEEcCCcEEEECCCcccCCCCccEEEEEC
Confidence 4456999999998753 23346899999999999999997765 6899999999998762 2 3466644
Q ss_pred c-----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 77 R-----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 77 ~-----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
. .|.|.|.+|+.+||.||+.|+..
T Consensus 92 ~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 120 (148)
T 1u5f_A 92 PDKRIYQFTAASPKDAEEWVQQLKFILQD 120 (148)
T ss_dssp TTSCEEEEECSSHHHHHHHHHHHHHHCC-
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 3 79999999999999999999763
No 45
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.17 E-value=2.8e-11 Score=118.07 Aligned_cols=92 Identities=15% Similarity=0.117 Sum_probs=73.5
Q ss_pred ccccceeEEEeeecc--ccccccceeeEEEecceeeecccCCC-CCCCCCceeEEeecceEEec----------------
Q 004783 9 QGRMEGWLHLIRSNR--IGLQYSRKRYFLLEDHFLKSFKSVPH-SKNEDPVRSAIIDSCIRVTD---------------- 69 (730)
Q Consensus 9 ~~~~eGwl~~~g~~~--~g~~~~~~Ryfvl~g~~l~~yk~~p~-~~~~~P~~~~ii~~~~~v~~---------------- 69 (730)
.+.+||||++.|.++ +++.-+++|||||+++.|.|||...+ ..+..|.+++-+++++.|+.
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~ 81 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRR 81 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccc
Confidence 467999999998654 56667899999999999999998422 12268999998998876542
Q ss_pred -----------------cccceecc----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 70 -----------------NGRESIHR----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 70 -----------------~g~~~~h~----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
+.|+|++. .|.|.|.+|+.+||+||+.|+..
T Consensus 82 ~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~~ 133 (169)
T 1btk_A 82 GEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRY 133 (169)
T ss_dssp ------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHTT
T ss_pred cCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 34556655 88999999999999999999874
No 46
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=6.7e-11 Score=106.90 Aligned_cols=87 Identities=13% Similarity=0.219 Sum_probs=65.5
Q ss_pred cccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecc-eEEec---cccceecc----cc
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSC-IRVTD---NGRESIHR----KL 79 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~-~~v~~---~g~~~~h~----~~ 79 (730)
..+.++|||++.|.. + ..-+++|||||+++.|.|||.+.. .|.+.+++-.| +++.+ +.|++... .|
T Consensus 8 ~~~~~~G~L~K~~~~-~-~k~WkkR~fvL~~~~L~yyk~~~~----~~~~~i~l~~~~v~~~~~~~~~F~I~~~~r~~~l 81 (114)
T 2da0_A 8 YGSEKKGYLLKKSDG-I-RKVWQRRKCSVKNGILTISHATSN----RQPAKLNLLTCQVKPNAEDKKSFDLISHNRTYHF 81 (114)
T ss_dssp CCSCEEEEEEEECSS-S-CCCEEEEEEEEETTEEEECCSSCC----SCCEEEETTTSEEEECSSSSSCEEEEETTEEEEE
T ss_pred CCccEEEEEEEeCCC-C-CCCceeEEEEEeCCEEEEEcCCCC----CCCCEEEeeeeEEEECCCCCCEEEEEcCCcEEEE
Confidence 456799999999863 2 245899999999999999998543 45565554444 33322 34666444 89
Q ss_pred cCCCHHHHHHHHHHHHHHHHh
Q 004783 80 GASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 80 ~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.+|+..||.||+.|+.+
T Consensus 82 ~a~s~~e~~~Wi~al~~~~~~ 102 (114)
T 2da0_A 82 QAEDEQDYVAWISVLTNSKEE 102 (114)
T ss_dssp ECSSHHHHHHHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999884
No 47
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.16 E-value=4.3e-11 Score=109.58 Aligned_cols=87 Identities=21% Similarity=0.300 Sum_probs=68.9
Q ss_pred cccccceeEEEeeeccccccccceeeEEEe--cceeeecccCCCCCCCCCceeEEeecceEE--e-------------cc
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLE--DHFLKSFKSVPHSKNEDPVRSAIIDSCIRV--T-------------DN 70 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~--g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v--~-------------~~ 70 (730)
..+.++|||++.|.. ..-+++|||||+ +..|.|||.+.. ...|.+.+-+.+|..+ + .+
T Consensus 16 ~~~~~~G~L~K~g~~---~~~Wk~R~fvL~~d~~~L~yy~~~~~--~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~ 90 (129)
T 1x1g_A 16 GTVVKQGYLAKQGHK---RKNWKVRRFVLRKDPAFLHYYDPSKE--ENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGN 90 (129)
T ss_dssp SEEEEEEEEEEECSS---SSSEEEEEEEEEESSCEEEEECSSSC--CSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSS
T ss_pred CCEEEEEEEEEECCC---CCCeeeEEEEEeCCCCeEEEeCCCCc--CCccceEEECcCCEEEEeCCCCCcccccCCCCCc
Confidence 456699999999764 445799999999 579999997522 2689999999987653 2 24
Q ss_pred ccceecc-----cccCCCHHHHHHHHHHHHHHHH
Q 004783 71 GRESIHR-----KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 71 g~~~~h~-----~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
.|++.+. .|.|.|.+|+.+||.||+.|+.
T Consensus 91 ~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 91 LFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp CEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred eEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 5666443 7999999999999999999975
No 48
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.16 E-value=6.8e-11 Score=119.36 Aligned_cols=89 Identities=18% Similarity=0.150 Sum_probs=73.9
Q ss_pred ccccceeEEEeeec-cccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec----------cccceecc
Q 004783 9 QGRMEGWLHLIRSN-RIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD----------NGRESIHR 77 (730)
Q Consensus 9 ~~~~eGwl~~~g~~-~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~----------~g~~~~h~ 77 (730)
.+.++|||++.|.. ++...-|++|||||+++.|.|||...+ ..|.+.+-|.+|+.+.. ++|++++.
T Consensus 105 ~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~---~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~ 181 (211)
T 1u5e_A 105 FVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKD---KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAP 181 (211)
T ss_dssp SEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTC---SSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECS
T ss_pred CccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCC---ccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcC
Confidence 46699999999874 323456899999999999999998776 68999999999999762 34666543
Q ss_pred -----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 -----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 -----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|.+|+.+||.||+.|+..
T Consensus 182 ~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 182 DKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999874
No 49
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.14 E-value=8.1e-11 Score=109.18 Aligned_cols=90 Identities=23% Similarity=0.270 Sum_probs=66.8
Q ss_pred ccccccccceeEEEeeeccccccccceeeEEE-ecceeeecccCCCCCCCCCceeEEeecce----------EEe-----
Q 004783 5 QITSQGRMEGWLHLIRSNRIGLQYSRKRYFLL-EDHFLKSFKSVPHSKNEDPVRSAIIDSCI----------RVT----- 68 (730)
Q Consensus 5 ~~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl-~g~~l~~yk~~p~~~~~~P~~~~ii~~~~----------~v~----- 68 (730)
.-.+.+.++|||++.|.. + .-+++||||| +++.|.|||.+.+ ..|.+.+.+...| .|.
T Consensus 3 ~~~~~v~~~G~L~K~g~~-~--k~WkkRwFVL~~~~~L~Yyk~~~~---~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~ 76 (130)
T 2d9v_A 3 SGSSGLVRGGWLWRQSSI-L--RRWKRNWFALWLDGTLGYYHDETA---QDEEDRVVIHFNVRDIKVGQECQDVQPPEGR 76 (130)
T ss_dssp TSCCCEEEEEEEEEECSS-S--CCEEEEEEEEETTTEEEEESSSST---TSEEEEEECTTTEEEEEEGGGCSSCCCCSSC
T ss_pred CCCCceeEEEEEEeecCc-c--CCceeeEEEEccCCEEEEEeCCCC---CCcCceEecccceeEEeccccccccCCCCCC
Confidence 345677899999999762 2 2479999999 8999999997765 4566655544322 121
Q ss_pred --ccccceecc-----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 69 --DNGRESIHR-----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 69 --~~g~~~~h~-----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.+.|++++. .|.|.|.+|+.+||+||+.|+..
T Consensus 77 ~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~~ 115 (130)
T 2d9v_A 77 SRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANST 115 (130)
T ss_dssp CTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence 235676552 79999999999999999999874
No 50
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.13 E-value=8.4e-11 Score=107.38 Aligned_cols=90 Identities=27% Similarity=0.428 Sum_probs=68.2
Q ss_pred cccccceeEEEeeeccccccccceeeEEEecc-eeeecccCCCCC--CCCCceeEEeecceEE-e----ccccceec---
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDH-FLKSFKSVPHSK--NEDPVRSAIIDSCIRV-T----DNGRESIH--- 76 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~-~l~~yk~~p~~~--~~~P~~~~ii~~~~~v-~----~~g~~~~h--- 76 (730)
..+.++|||++.|.. ..-+++|||||+++ .|.|||.+++.. +..||....+-.|..+ . .++|++.+
T Consensus 6 ~~~~~~G~L~K~g~~---~k~WkkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~ 82 (125)
T 1unq_A 6 VAIVKEGWLHKRGEY---IKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQW 82 (125)
T ss_dssp GCEEEEEEEEEECSS---SCCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEET
T ss_pred CCeeEEeeEEeccCC---ccCccCcEEEEecCCEEEEEeCCCCCCCCceeEccceeEEeeeecccccCCCCEEEEEecCC
Confidence 456799999998863 34479999999975 999999887642 2568877766555332 2 23577764
Q ss_pred c-----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 77 R-----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 77 ~-----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
. .|.|.|.+|+..||.||+.|+..
T Consensus 83 ~~~~~~~~~a~s~~e~~~Wi~al~~~~~~ 111 (125)
T 1unq_A 83 TTVIERTFHVETPEEREEWTTAIQTVADG 111 (125)
T ss_dssp TEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCceeEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 2 69999999999999999999873
No 51
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.13 E-value=1e-10 Score=106.79 Aligned_cols=99 Identities=17% Similarity=0.142 Sum_probs=70.2
Q ss_pred cccccccccceeEEEeeec-----cccccccceeeEEEecceeeecccCCCCC-CCCCce--eEEeecceE-Ee-c----
Q 004783 4 SQITSQGRMEGWLHLIRSN-----RIGLQYSRKRYFLLEDHFLKSFKSVPHSK-NEDPVR--SAIIDSCIR-VT-D---- 69 (730)
Q Consensus 4 ~~~~~~~~~eGwl~~~g~~-----~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~-~~~P~~--~~ii~~~~~-v~-~---- 69 (730)
|.-+.++.+||||++.+.. +.+..-+++|||||+++.|.|||.+.+.. ...|.. .+-+.+|+. +. +
T Consensus 2 ~~~~~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~r 81 (123)
T 1wjm_A 2 SSGSSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKR 81 (123)
T ss_dssp CSCCCCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTTCSSC
T ss_pred CCCCCCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEeecccccCC
Confidence 5667888999999998874 33466789999999999999999776532 122333 333444433 21 2
Q ss_pred -cccceec--c---cccCCCHHHHHHHHHHHHHHHHhCC
Q 004783 70 -NGRESIH--R---KLGASSPEEAAKWIHSLQEAALKGG 102 (730)
Q Consensus 70 -~g~~~~h--~---~~~a~~~e~a~~W~~a~~~a~~~~~ 102 (730)
+.|++.. + .|.|.|.+|+..||+||+.|+....
T Consensus 82 ~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~~~ 120 (123)
T 1wjm_A 82 KHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASGP 120 (123)
T ss_dssp SSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhccC
Confidence 2345432 2 7999999999999999999988543
No 52
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.11 E-value=1.3e-10 Score=107.99 Aligned_cols=95 Identities=14% Similarity=0.172 Sum_probs=69.4
Q ss_pred cccccccccceeEEEe-----eeccccccccceeeEEEecceeeecccCCCC--------CCCCCceeEEeecceEEe--
Q 004783 4 SQITSQGRMEGWLHLI-----RSNRIGLQYSRKRYFLLEDHFLKSFKSVPHS--------KNEDPVRSAIIDSCIRVT-- 68 (730)
Q Consensus 4 ~~~~~~~~~eGwl~~~-----g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~--------~~~~P~~~~ii~~~~~v~-- 68 (730)
|.-+..+.+||||++. | .++. .-+++|||||+|+.|.|||.+... ....|.+.+-|.+|+...
T Consensus 6 s~~~~~~~k~G~L~kk~~~~~G-~~~~-k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~ 83 (129)
T 2p0d_A 6 SVGSHEVEKSGLLNMTKIAQGG-RKLR-KNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGR 83 (129)
T ss_dssp ---CCSEEEEEEEEEEEEEETT-EECC-CCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEECT
T ss_pred CCCCcceeEEEEEEEeeeccCC-CcCC-CCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECC
Confidence 3445677799999985 4 2343 458999999999999999987421 236899999999988642
Q ss_pred c-----cccceec--c---cccCCCHHHHHHHHHHHHHHHHh
Q 004783 69 D-----NGRESIH--R---KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 69 ~-----~g~~~~h--~---~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
| +.|++.. + .|.|.|.+||..|++||+.|+.+
T Consensus 84 ~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~ 125 (129)
T 2p0d_A 84 HLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIER 125 (129)
T ss_dssp TSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 2 3455532 2 68999999999999999999874
No 53
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.06 E-value=2.1e-10 Score=101.04 Aligned_cols=86 Identities=16% Similarity=0.216 Sum_probs=59.7
Q ss_pred cceeEEEeeec-----cccccccceeeEEEecceeeecccCCCC---CCCCCceeEEeecceE-Ee------ccccceec
Q 004783 12 MEGWLHLIRSN-----RIGLQYSRKRYFLLEDHFLKSFKSVPHS---KNEDPVRSAIIDSCIR-VT------DNGRESIH 76 (730)
Q Consensus 12 ~eGwl~~~g~~-----~~g~~~~~~Ryfvl~g~~l~~yk~~p~~---~~~~P~~~~ii~~~~~-v~------~~g~~~~h 76 (730)
|||||++.|.. +-+..-+++|||||+|+.|.|||.+.+. ....|...+-+.+++. +. .+.|++.+
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~ 80 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRL 80 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSSCCSSSSEEEEEC
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEcccccCCccEEEEEe
Confidence 79999999831 1344568999999999999999976631 1122443333444432 21 23466643
Q ss_pred c-----cccCCCHHHHHHHHHHHHHH
Q 004783 77 R-----KLGASSPEEAAKWIHSLQEA 97 (730)
Q Consensus 77 ~-----~~~a~~~e~a~~W~~a~~~a 97 (730)
. .|.|.|.+|+.+||.||+.|
T Consensus 81 ~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 81 SDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp TTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 2 79999999999999999875
No 54
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.05 E-value=2e-10 Score=108.24 Aligned_cols=96 Identities=18% Similarity=0.327 Sum_probs=82.5
Q ss_pred CcccccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEecc-------cccee
Q 004783 3 NSQITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDN-------GRESI 75 (730)
Q Consensus 3 ~~~~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~~-------g~~~~ 75 (730)
.|.||...+.++||-..+..++..--+++|||||+|+.|.|||++.+.. .+|++.+.+.||.++-|. +++..
T Consensus 2 ~~~~~~~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~~-~ePig~I~L~gceV~pd~~~~~~kf~ikl~ 80 (137)
T 2ys3_A 2 SSGSSGIPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEAP-GDPIQQLNLKGCEVVPDVNVSGQKFCIKLL 80 (137)
T ss_dssp CCCSCSCCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTTT-SCCSCCBCTTTCEEEECCBGGGTBEEEEEE
T ss_pred CCccCCCcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhcc-CCCceEEECCCCEEeccccccCCceEEEEE
Confidence 4678899999999999999999988889999999999999999998744 599999999999976663 22222
Q ss_pred c----c----cccCCCHHHHHHHHHHHHHHHH
Q 004783 76 H----R----KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 76 h----~----~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
. | .|.|.|.++.++||.|++.|+-
T Consensus 81 iPs~~g~r~y~l~cdsEeqy~~WMaA~rlAsk 112 (137)
T 2ys3_A 81 VPSPEGMSEIYLRCQDEQQYARWMAGCRLASK 112 (137)
T ss_dssp EECSSSEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred ccCCCCceEEEEECCCHHHHHHHHHHHHHhcc
Confidence 1 2 7899999999999999999974
No 55
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.04 E-value=3.1e-10 Score=115.57 Aligned_cols=89 Identities=27% Similarity=0.438 Sum_probs=76.1
Q ss_pred cccccceeEEEeeec--cccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEecc-----ccceecc---
Q 004783 8 SQGRMEGWLHLIRSN--RIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDN-----GRESIHR--- 77 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~--~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~~-----g~~~~h~--- 77 (730)
..+.++|||++.|.. +++..-+++|||||+++.|.|||.+.+ ..|.+++-|.+|+.|++. +|++...
T Consensus 56 ~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~---~~~~g~I~L~~~~~v~~~~~k~~~F~I~t~~r~ 132 (228)
T 3tfm_A 56 QEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSE---EKLKGTVEVRSAKEIIDNTNKENGIDIIMADRT 132 (228)
T ss_dssp CCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTC---CSEEEEEEGGGCSEEEEETTTTSEEEEECSSCE
T ss_pred CCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCC---cceeEEEEcCCCEEeccCCCCCcEEEEEcCCcE
Confidence 456699999999874 466677899999999999999997765 689999999999987653 4666555
Q ss_pred -cccCCCHHHHHHHHHHHHHHHH
Q 004783 78 -KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 78 -~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
.|.|.|.+|+..||.||+.|+.
T Consensus 133 ~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 133 FHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999986
No 56
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=98.99 E-value=6.1e-10 Score=107.17 Aligned_cols=90 Identities=21% Similarity=0.370 Sum_probs=57.3
Q ss_pred ccccceeEEEeee-----cc--ccccccceeeEEEecceeeecccCCCCCCCCCceeEEeec--ceE-Ee------cccc
Q 004783 9 QGRMEGWLHLIRS-----NR--IGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDS--CIR-VT------DNGR 72 (730)
Q Consensus 9 ~~~~eGwl~~~g~-----~~--~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~--~~~-v~------~~g~ 72 (730)
.+.+||||++... .| -+..-|++|||||+|+.|.|||.+.+.. ..|.+.+.|+. |+. +. .+.|
T Consensus 2 dv~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~~~-~~~~g~i~l~~~~~~~~~~~~~~~~~~~F 80 (168)
T 2j59_M 2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQT-TPSEEEQPISVNACLIDISYSETKRKNVF 80 (168)
T ss_dssp -CCEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC---------CEECSSCEEEECSSSCSCSSEE
T ss_pred CCcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCcccc-cccCCceEecccceEEEeccccCCCCCEE
Confidence 4679999995320 01 1334589999999999999999875421 45666655555 432 22 2245
Q ss_pred ceecc----cccCCCHHHHHHHHHHHHHHHH
Q 004783 73 ESIHR----KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 73 ~~~h~----~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
++.+. .|.|.|.+|+..||.||+.|+.
T Consensus 81 ~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 81 RLTTSDCECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp EEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred EEEeCCceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 65444 7999999999999999999975
No 57
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=98.94 E-value=2.3e-09 Score=100.24 Aligned_cols=92 Identities=18% Similarity=0.169 Sum_probs=71.7
Q ss_pred ccceeEEEe-----eeccccccccceeeEEEecceeeecccCCC------CCCCCCceeEEeecceEEe-cc-----ccc
Q 004783 11 RMEGWLHLI-----RSNRIGLQYSRKRYFLLEDHFLKSFKSVPH------SKNEDPVRSAIIDSCIRVT-DN-----GRE 73 (730)
Q Consensus 11 ~~eGwl~~~-----g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~------~~~~~P~~~~ii~~~~~v~-~~-----g~~ 73 (730)
.|+|.|++. |... -...+++|||||.||.|.||+.+.. +...+|.+.+.|+|+++.. |+ -|+
T Consensus 2 ~~~G~L~rk~llK~G~k~-~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~~~e~~~~~~~F~ 80 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKP-ALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQLPDDPEHPDIFQ 80 (126)
T ss_dssp CEEEEEEEEEEEBTTBCC-SSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEECCCCTTSTTEEE
T ss_pred ceeeeeeeeehhhcCCcc-cccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEEecCCCCCCCEEE
Confidence 589999975 5432 2467899999999999999997741 1126999999999998832 22 366
Q ss_pred ee---cc---cccCCCHHHHHHHHHHHHHHHHhCCC
Q 004783 74 SI---HR---KLGASSPEEAAKWIHSLQEAALKGGP 103 (730)
Q Consensus 74 ~~---h~---~~~a~~~e~a~~W~~a~~~a~~~~~~ 103 (730)
+. +| .|.|.|+++|+.|++||+.|+....+
T Consensus 81 L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~~~ 116 (126)
T 2dtc_A 81 LNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSSRP 116 (126)
T ss_dssp EECTTSCSEEEEECSSHHHHHHHHHHHHHHHTSCCC
T ss_pred EeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhcCCC
Confidence 54 34 99999999999999999999985444
No 58
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=98.92 E-value=4.5e-10 Score=103.64 Aligned_cols=90 Identities=17% Similarity=0.178 Sum_probs=60.0
Q ss_pred ccccceeEEEeeeccccccccceeeEEEec-ceeeecccCCC------C--------CCCCCceeEEeecceEE------
Q 004783 9 QGRMEGWLHLIRSNRIGLQYSRKRYFLLED-HFLKSFKSVPH------S--------KNEDPVRSAIIDSCIRV------ 67 (730)
Q Consensus 9 ~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g-~~l~~yk~~p~------~--------~~~~P~~~~ii~~~~~v------ 67 (730)
.+.+||||++.+.+.+. .-+++|||||++ ..|.||+.+.+ . ....|.+.+.+.+|+.+
T Consensus 3 ~~~k~G~L~K~~g~~~~-k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~ 81 (128)
T 2rlo_A 3 IPIKQSFLLKRSGNSLN-KEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGS 81 (128)
T ss_dssp CEEEEEEEEEECSCSTT-CCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCC
T ss_pred cceeEEEEEEecCCCcc-CCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCcccccccccccccccc
Confidence 45699999998533233 347999999997 57888865211 0 00234444444444322
Q ss_pred ------eccccceecc-----cccCCCHHHHHHHHHHHHHHHH
Q 004783 68 ------TDNGRESIHR-----KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 68 ------~~~g~~~~h~-----~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
..+.|++++. .|.|.|.+|+..||+||+.|+.
T Consensus 82 ~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~ 124 (128)
T 2rlo_A 82 AGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQIL 124 (128)
T ss_dssp CSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 2345666543 7999999999999999999986
No 59
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=98.92 E-value=2.2e-09 Score=111.89 Aligned_cols=95 Identities=14% Similarity=0.223 Sum_probs=69.8
Q ss_pred cccccccceeEEEeeec---c------ccccccceeeEEEecceeeecccCCCC---CCCCCceeEEeecceEE--ec--
Q 004783 6 ITSQGRMEGWLHLIRSN---R------IGLQYSRKRYFLLEDHFLKSFKSVPHS---KNEDPVRSAIIDSCIRV--TD-- 69 (730)
Q Consensus 6 ~~~~~~~eGwl~~~g~~---~------~g~~~~~~Ryfvl~g~~l~~yk~~p~~---~~~~P~~~~ii~~~~~v--~~-- 69 (730)
.+..+.++|||++.... | .+..-|++|||||+|+.|.|||.+... ....|.+.+-|++|+.+ .|
T Consensus 7 ~~~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~ 86 (263)
T 3a8p_A 7 EQGVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEHP 86 (263)
T ss_dssp ---CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEECTTCS
T ss_pred cCCCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEECCcCC
Confidence 45678899999943221 1 224568999999999999999986531 23689999889888764 22
Q ss_pred ---cccceec--c---cccCCCHHHHHHHHHHHHHHHHh
Q 004783 70 ---NGRESIH--R---KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 70 ---~g~~~~h--~---~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
+.|++.+ + .|.|.|.+||..||+||+.|+..
T Consensus 87 kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~ 125 (263)
T 3a8p_A 87 KKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACAS 125 (263)
T ss_dssp SCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 3466655 3 89999999999999999999874
No 60
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=98.85 E-value=6e-09 Score=108.17 Aligned_cols=84 Identities=19% Similarity=0.215 Sum_probs=62.4
Q ss_pred ccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEE---eecceEE------------eccccc
Q 004783 9 QGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAI---IDSCIRV------------TDNGRE 73 (730)
Q Consensus 9 ~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~i---i~~~~~v------------~~~g~~ 73 (730)
..+++||||+.|.++ .-|++|||||+|+.|.|||...+. .|.+.+. +..+... ..++|.
T Consensus 167 ~p~~~G~L~k~~~~~---k~WkkR~fvL~~~~L~yyk~~~~~---~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~ 240 (291)
T 3tca_A 167 VPELEGALYLKEDGK---KSWKRRYFLLRASGIYYVPKGKTK---TSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFV 240 (291)
T ss_dssp CCCCEEEEEEECTTS---SCEEEEEEEECSSEEEECCTTCCS---STTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEE
T ss_pred CCceEEEEEEeCCCC---CCceEEEEEEeCCEEEEEecCccc---cccCceeeccceeEEEEecCccccccCCCCCeEEE
Confidence 456999999998764 337999999999999999977763 4443332 2233221 134677
Q ss_pred eecc----------cccCCCHHHHHHHHHHHHHHH
Q 004783 74 SIHR----------KLGASSPEEAAKWIHSLQEAA 98 (730)
Q Consensus 74 ~~h~----------~~~a~~~e~a~~W~~a~~~a~ 98 (730)
+.|. .|+|.|.+|+..||.||+.|.
T Consensus 241 i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 241 LKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp EECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 7653 599999999999999999995
No 61
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=98.85 E-value=4e-09 Score=114.98 Aligned_cols=89 Identities=16% Similarity=0.178 Sum_probs=65.2
Q ss_pred cccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceE--Eecc----ccceecc----
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIR--VTDN----GRESIHR---- 77 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~--v~~~----g~~~~h~---- 77 (730)
+.+.++|||++.|.+.+.+.-|++|||||+++.|.|||. ++ ..|.+.+-+.+|++ +++. .|+++..
T Consensus 276 ~~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~-~~---~~~~~~i~l~~~~v~~~~~~~r~~~F~i~t~~~~~ 351 (385)
T 2q13_A 276 NLTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQAR-GD---VAGGLAMDIDNCSVMAVDCEDRRYCFQITSFDGKK 351 (385)
T ss_dssp CCSCCEEEEEEC--------CCEEEEEEEETTEEEEECS-SC---SSCEEEEECTTCEEEEECCTTCSSEEEEECTTSCB
T ss_pred CCccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecC-CC---cCCCceEEccceEEEeccccCCCceEEEEeCCCCe
Confidence 356799999999876544445899999999999999998 33 56777777888875 2222 3555432
Q ss_pred --cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 --KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 --~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|.+|+..||+||+.|+..
T Consensus 352 ~~~l~A~s~~e~~~Wi~ai~~~~~~ 376 (385)
T 2q13_A 352 SSILQAESKKDHEEWICTINNISKQ 376 (385)
T ss_dssp CCCEECSSHHHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 79999999999999999999874
No 62
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=98.81 E-value=2.7e-09 Score=97.54 Aligned_cols=97 Identities=16% Similarity=0.120 Sum_probs=68.8
Q ss_pred cccccccccceeEEEeeec-----cccccccceeeEEEecceeeecccCCCCC--CCCCc---eeEEeecceE--Eec--
Q 004783 4 SQITSQGRMEGWLHLIRSN-----RIGLQYSRKRYFLLEDHFLKSFKSVPHSK--NEDPV---RSAIIDSCIR--VTD-- 69 (730)
Q Consensus 4 ~~~~~~~~~eGwl~~~g~~-----~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~--~~~P~---~~~ii~~~~~--v~~-- 69 (730)
|-.+.++.+||||++.+.- +.+..-+++|||||+|+.|.|||.+.+.. +..|+ +++-+.+|+. ..|
T Consensus 2 ~~~~~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~ 81 (122)
T 1dro_A 2 SGTGAGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYT 81 (122)
T ss_dssp CSCCSSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSSS
T ss_pred CCCCCceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCCCC
Confidence 5567889999999997642 23566789999999999999999876531 12222 3333555433 222
Q ss_pred ---cccceec--c---cccCCCHHHHHHHHHHHHHHHHh
Q 004783 70 ---NGRESIH--R---KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 70 ---~g~~~~h--~---~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
+-|++.+ + .|.|.|.+||..|++||+.|+..
T Consensus 82 kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 82 KKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp SSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 2355442 2 79999999999999999999863
No 63
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=98.80 E-value=9.8e-09 Score=98.35 Aligned_cols=87 Identities=18% Similarity=0.233 Sum_probs=64.8
Q ss_pred ccceeEEEeeeccccccccceeeEEEecceeeecccCCCC-------------------------------CCCCC----
Q 004783 11 RMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHS-------------------------------KNEDP---- 55 (730)
Q Consensus 11 ~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~-------------------------------~~~~P---- 55 (730)
.++||||+.+. +... +++|||||.++.|.|++..-.+ ...+|
T Consensus 2 ~k~G~L~~~~~--~~~~-w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~ 78 (150)
T 2fjl_A 2 IKNGILYLEDP--VNHE-WYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREH 78 (150)
T ss_dssp CEEEEEEEEET--TTTE-EEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSS
T ss_pred CcceEEEeecC--CCCC-ceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhc
Confidence 36899999864 7777 5999999999999999822210 01223
Q ss_pred -----------ceeEEeecceEEec----cc----cceecc-------cccCCCHHHHHHHHHHHHHHHHh
Q 004783 56 -----------VRSAIIDSCIRVTD----NG----RESIHR-------KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 56 -----------~~~~ii~~~~~v~~----~g----~~~~h~-------~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.+++.|.||.++.- ++ |+|.+. .|||.|.|||..||+||++|+..
T Consensus 79 l~E~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~~ 149 (150)
T 2fjl_A 79 LDENSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQT 149 (150)
T ss_dssp SCTTTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 57777899998532 22 455333 89999999999999999999763
No 64
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=98.80 E-value=8.9e-09 Score=111.24 Aligned_cols=85 Identities=25% Similarity=0.462 Sum_probs=68.6
Q ss_pred cccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEe--c----cccceec-------
Q 004783 10 GRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVT--D----NGRESIH------- 76 (730)
Q Consensus 10 ~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~--~----~g~~~~h------- 76 (730)
+.++|||++.|.. ..-|++|||||+++.|.|||.+.+ ..|.+.+-+.+|+..+ + +.+++.+
T Consensus 213 ~~k~G~L~K~g~~---~k~WkkRwFVL~~~~L~Yyk~~~~---~~p~G~I~L~~~~v~~~~~~~~~~~F~I~~~~~~~~~ 286 (347)
T 2r09_A 213 PDREGWLLKLGGR---VKTWKRRWFILTDNCLYYFEYTTD---KEPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQV 286 (347)
T ss_dssp CCEEEEEEEECSS---SCCEEEEEEEEETTEEEEESSTTC---SSCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCC
T ss_pred cccCCeeEecCCC---cccceeEEEEEcCCEEEEEcCCCc---cCCcEEEEcCCeEEEEccCCCCCCEEEEEeCCccccc
Confidence 4699999999864 234899999999999999997765 6899999999987532 2 2355532
Q ss_pred -----------------c--cccCCCHHHHHHHHHHHHHHHHh
Q 004783 77 -----------------R--KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 77 -----------------~--~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
. .|.|.|.+|+.+||.||+.|+..
T Consensus 287 ~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~ 329 (347)
T 2r09_A 287 IKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 329 (347)
T ss_dssp CCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHC
T ss_pred cccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 1 58999999999999999999873
No 65
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=98.78 E-value=7.2e-09 Score=113.73 Aligned_cols=90 Identities=16% Similarity=0.137 Sum_probs=68.0
Q ss_pred cccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEE-e-cc----ccceec--c--
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRV-T-DN----GRESIH--R-- 77 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v-~-~~----g~~~~h--~-- 77 (730)
+.+.+|||||+.+.+.....-|++|||||+|+.|.|||+... .|...+.+.+|++. . +. .|++++ +
T Consensus 299 ~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~~----~~~~~~~l~~~~v~~~~~~~r~~cF~i~~~~~~~ 374 (407)
T 4h8s_A 299 NLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAV----AGGLIQDLDNCSVMAVDCEDRRYCFQITTPNGKS 374 (407)
T ss_dssp SCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTCS----SCCCCBCSSCCEEEEECCTTCSSEEEEECTTSSC
T ss_pred CcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCCC----CCCeEEECCceEEEECCCCCCCceEEEEecCCCc
Confidence 456699999998776554556999999999999999986543 44555556677652 2 22 356643 2
Q ss_pred --cccCCCHHHHHHHHHHHHHHHHhC
Q 004783 78 --KLGASSPEEAAKWIHSLQEAALKG 101 (730)
Q Consensus 78 --~~~a~~~e~a~~W~~a~~~a~~~~ 101 (730)
.|.|.|.+|+..||+||+.|+.+.
T Consensus 375 ~~~l~A~s~~e~~~Wi~ai~~a~~~~ 400 (407)
T 4h8s_A 375 GIILQAESRKENEEWICAINNISRQI 400 (407)
T ss_dssp CEEEECSSSHHHHHHHHHHHHHHSCC
T ss_pred eEEEEcCCHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999998743
No 66
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=98.76 E-value=7.1e-09 Score=113.64 Aligned_cols=90 Identities=18% Similarity=0.251 Sum_probs=71.7
Q ss_pred cccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEE---e------------cc
Q 004783 6 ITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRV---T------------DN 70 (730)
Q Consensus 6 ~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v---~------------~~ 70 (730)
++..+.++|||++.|.. ...-+++|||||+++.|.|||...+ ..|.+.+.+..++.+ . .+
T Consensus 265 l~~~~~k~G~L~K~g~~--~~k~WKkRwFVL~~~~L~YYk~~~d---~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~ 339 (386)
T 3lju_X 265 LSRNYLKEGYMEKTGPK--QTEGFRKRWFTMDDRRLMYFKDPLD---AFARGEVFIGSKESGYTVLHGFPPSTQGHHWPH 339 (386)
T ss_dssp SSCCCSEEEEEEECCTT--SCSCCEEEEEEEETTEEEEESSTTC---SBCSEEEECCCGGGTCEEEESCCTTCCSCCSCE
T ss_pred cccccceeeeEEEECCC--CCCCCcccEEEEECCEEEEEecCCC---cccceEEEeecceeeeeecccCCccccccCCCc
Confidence 45667799999998874 2123799999999999999998665 688998888766543 1 14
Q ss_pred ccceecc----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 71 GRESIHR----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 71 g~~~~h~----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
+|+++.. .|.|.|.+|+.+||.||+.|+.+
T Consensus 340 ~F~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i~~ 373 (386)
T 3lju_X 340 GITIVTPDRKFLFACETESDQREWVAAFQKAVDR 373 (386)
T ss_dssp EEEEECSSCEEEEEESSHHHHHHHHHHHHHHHHS
T ss_pred EEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 4666544 89999999999999999999985
No 67
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=98.72 E-value=9.6e-09 Score=107.19 Aligned_cols=90 Identities=23% Similarity=0.350 Sum_probs=67.5
Q ss_pred cccccccccceeEEEeeeccccccccceeeEEEecc-------eeeecccCCCC-CC-CCCceeEEeecceEEec-----
Q 004783 4 SQITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDH-------FLKSFKSVPHS-KN-EDPVRSAIIDSCIRVTD----- 69 (730)
Q Consensus 4 ~~~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~-------~l~~yk~~p~~-~~-~~P~~~~ii~~~~~v~~----- 69 (730)
++....+.++|||++. .-+++|||||+++ .|.|||.+.+. +. ..|.+++-|..|+.|+.
T Consensus 4 ~~~~~~v~k~G~L~K~-------K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~~~ 76 (264)
T 1qqg_A 4 SDGFSDVRKVGYLRKP-------KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRADSK 76 (264)
T ss_dssp -----CEEEEEEEECT-------TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECCSS
T ss_pred CCCCCCccEEEEEEEC-------CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccCCC
Confidence 3455677899999986 2489999999999 99999977642 11 47999999999987642
Q ss_pred --cccceecc----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 70 --NGRESIHR----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 70 --~g~~~~h~----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
+.|+++.. .|.|.|.+|+..|+.||+.++..
T Consensus 77 ~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~ 113 (264)
T 1qqg_A 77 NKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNR 113 (264)
T ss_dssp CSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC--
T ss_pred CCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 23555444 89999999999999999999764
No 68
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=98.71 E-value=2.5e-08 Score=92.00 Aligned_cols=94 Identities=17% Similarity=0.184 Sum_probs=64.8
Q ss_pred ccccccceeEEEeee----ccccccccceeeEEEecceeeecccCCCCCC---------CCCceeEEeecceEEe---cc
Q 004783 7 TSQGRMEGWLHLIRS----NRIGLQYSRKRYFLLEDHFLKSFKSVPHSKN---------EDPVRSAIIDSCIRVT---DN 70 (730)
Q Consensus 7 ~~~~~~eGwl~~~g~----~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~---------~~P~~~~ii~~~~~v~---~~ 70 (730)
+..+.+||||++... .|.+..-+++|||||+|+.|.|||....... ..|...+-|.+|+..- |.
T Consensus 5 ~~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~d~ 84 (124)
T 3pp2_A 5 TKTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDK 84 (124)
T ss_dssp ----CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCGGG
T ss_pred CCcEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEeccccc
Confidence 455779999998732 2345557899999999999999996654311 1567776677776522 32
Q ss_pred -c----ccee--cc---cccCCCHHHHHHHHHHHHHHHHh
Q 004783 71 -G----RESI--HR---KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 71 -g----~~~~--h~---~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
. |++. .| .|.|.|.+||..|+++|..||++
T Consensus 85 ~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~~ 124 (124)
T 3pp2_A 85 SSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQE 124 (124)
T ss_dssp CSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC-
T ss_pred CCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHhC
Confidence 2 3332 23 89999999999999999999863
No 69
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=98.68 E-value=2.5e-08 Score=109.33 Aligned_cols=85 Identities=21% Similarity=0.265 Sum_probs=66.2
Q ss_pred ccccceeEEEeeeccccccccceeeEEE--ecceeeecccCCCCCCCCCceeEEeecceEEe-------ccccceec---
Q 004783 9 QGRMEGWLHLIRSNRIGLQYSRKRYFLL--EDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVT-------DNGRESIH--- 76 (730)
Q Consensus 9 ~~~~eGwl~~~g~~~~g~~~~~~Ryfvl--~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~-------~~g~~~~h--- 76 (730)
...+||||++.|... .+ +++||||| +++.|.|||++.+ .+|.+.+.|+++..+. .+|+++..
T Consensus 145 ~~~keG~L~KrG~~~--k~-WkrRwFVL~~~~~~L~Yy~~~~~---~~p~g~I~L~~~~~~~~~~~~~~~~~f~I~~~~~ 218 (386)
T 3lju_X 145 AGYREGFLWKRGRDN--GQ-FLSRKFVLTEREGALKYFNRNDA---KEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKD 218 (386)
T ss_dssp SSEEEEEEEEECSSS--CC-EEEEEEEEETTTTEEEEEC--------CCSEEEEGGGEEEEECHHHHTSTTCEEEEEEET
T ss_pred ccccccceeeecccc--CC-ceEEEEEEEcCCCEEEEECCCCc---cCcccEEEeeccEEEEcccccCCCceEEEEEecC
Confidence 456999999999863 33 69999999 9999999998765 7999999999876654 34677641
Q ss_pred c-----cccCCCHHHHHHHHHHHHHHHH
Q 004783 77 R-----KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 77 ~-----~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
+ .|.|.|.+|+..|++||+.|..
T Consensus 219 ~~~R~y~l~A~s~~e~~~Wi~aIr~a~~ 246 (386)
T 3lju_X 219 NSTRNIFIYHEDGKEIVDWFNALRAARF 246 (386)
T ss_dssp TEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEcCCHHHHHHHHHhhhhccc
Confidence 2 7899999999999999999854
No 70
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=98.57 E-value=3.8e-08 Score=90.55 Aligned_cols=89 Identities=25% Similarity=0.306 Sum_probs=64.5
Q ss_pred ccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec-------------c--cccee
Q 004783 11 RMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD-------------N--GRESI 75 (730)
Q Consensus 11 ~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~-------------~--g~~~~ 75 (730)
.+||||-+-....+....+++|||||.++.|.|||.+++.+...|.+++-++..+-|+. . -|+|.
T Consensus 2 ~~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~ 81 (117)
T 2rov_A 2 RLEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQIL 81 (117)
T ss_dssp CSEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEE
T ss_pred ceEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEcccccccccccccCCcEEEEE
Confidence 48999986222224444689999999999999999876532257888766766554321 1 26664
Q ss_pred c--------c--cccCCCHHHHHHHHHHHHHHHH
Q 004783 76 H--------R--KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 76 h--------~--~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
+ . -|-|.|.||..+|+.||+.++.
T Consensus 82 ~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 82 YANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp ECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred eCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 3 1 6779999999999999999875
No 71
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=98.53 E-value=2e-07 Score=90.26 Aligned_cols=95 Identities=16% Similarity=0.301 Sum_probs=81.1
Q ss_pred cccccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec-------cccce--
Q 004783 4 SQITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD-------NGRES-- 74 (730)
Q Consensus 4 ~~~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~-------~g~~~-- 74 (730)
..||...+-.+||-..+..|+.+.=+++||||+++..|.|||.+.+.. .+|+.++.+-||.++-| .+++.
T Consensus 41 ~~it~iPeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~~-geP~~~I~LrGCEVtpDVnva~~Kf~IkL~v 119 (173)
T 4f7h_A 41 GDITSIPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEESS-GTPAHQMNLRGCEVTPDVNISGQKFNIKLLI 119 (173)
T ss_dssp CCGGGTTCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGCS-SCCSEEEECTTCEEEEEEETTTTEEEEEEEE
T ss_pred hhhhcChhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHhc-CCCceEEecCceEEeccccccccceeEEEec
Confidence 347888889999999899999998899999999999999999999876 79999999999998644 12332
Q ss_pred -ec-c----cccCCCHHHHHHHHHHHHHHHH
Q 004783 75 -IH-R----KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 75 -~h-~----~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
++ | -|.|.|.+..++||.|.+.|+.
T Consensus 120 P~~~gm~e~~Lrcd~E~qya~WMAAcrLAsk 150 (173)
T 4f7h_A 120 PVAEGMNEIWLRCDNEKQYAHWMAACRLASK 150 (173)
T ss_dssp EETTEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cCCCCcceeeeecCCHHHHHHHHHHhhhhcc
Confidence 12 2 6899999999999999999965
No 72
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=98.37 E-value=5.9e-07 Score=94.50 Aligned_cols=89 Identities=20% Similarity=0.183 Sum_probs=63.7
Q ss_pred cccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceE--Ee----------cccccee
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIR--VT----------DNGRESI 75 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~--v~----------~~g~~~~ 75 (730)
++.+.+||||+.+..+- =|++|||||+++.|+||++..+.....++.-..+++|.+ +. ++||.+-
T Consensus 156 ~~pe~~G~L~~k~~~~k---~WkkRyfvLr~sgLyy~~K~~sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik 232 (281)
T 4gmv_A 156 TVPEIEGVLWLKDDGKK---SWKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLK 232 (281)
T ss_dssp CCCCCEEEEEEECTTSS---CEEEEEEEECSSCEEEC---------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEE
T ss_pred CCCccEEEEEEECCCCC---CCeEEEEEEeCCEEEEEeCCCCCccccceEEEEcCCcEEEEecccccccCCCCCcEEEEe
Confidence 45679999999987553 369999999999999999765422244455666887665 22 6677775
Q ss_pred cc----------cccCCCHHHHHHHHHHHHHHHH
Q 004783 76 HR----------KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 76 h~----------~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
|. .|+|.|.+++..||.||..|.-
T Consensus 233 ~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~ 266 (281)
T 4gmv_A 233 HPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKY 266 (281)
T ss_dssp CTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 42 8999999999999999999953
No 73
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=98.37 E-value=2.1e-07 Score=102.20 Aligned_cols=89 Identities=29% Similarity=0.428 Sum_probs=62.7
Q ss_pred cccccceeEEEeeeccccccccceeeEEEe-cceeeecccCCCCC--CCCCceeEEeecceE-Eec----cccceecc--
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLE-DHFLKSFKSVPHSK--NEDPVRSAIIDSCIR-VTD----NGRESIHR-- 77 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~-g~~l~~yk~~p~~~--~~~P~~~~ii~~~~~-v~~----~g~~~~h~-- 77 (730)
..+.+||||.|.|.. +. .|++|||||+ ++.|.|||.++... +.+|+...-+-.|.. ..+ +++++.-.
T Consensus 4 ~~v~keG~L~K~g~~-~k--~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~ 80 (446)
T 4ejn_A 4 VAIVKEGWLHKRGEY-IK--TWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQW 80 (446)
T ss_dssp CCEEEEEEEEEEETT-TT--EEEEEEEEEETTSBEEEESSCC-------CCCGGGBCTTCEEEEECSSSTTEEEEEEEET
T ss_pred ceEEEEeeEEeeccc-cc--cccceEEEEeeCCEEEEEecCCCCCccCcccccCccccceeecCCCCCCCceeEEEcCCC
Confidence 457799999999864 33 5899999997 89999999999743 355665554433433 222 34444311
Q ss_pred ------cccCCCHHHHHHHHHHHHHHHH
Q 004783 78 ------KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 78 ------~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
.+.+.++|+++.|+.||+.|++
T Consensus 81 ~~~~~r~~~~~~~ee~e~W~~ai~~~i~ 108 (446)
T 4ejn_A 81 TTVIERTFHVETPEEREEWTTAIQTVAD 108 (446)
T ss_dssp TEEEEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred ceeeeeEEecCCHHHHHHHHHHHHhhhh
Confidence 6889999999999999999976
No 74
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=98.36 E-value=6.9e-07 Score=93.91 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=67.8
Q ss_pred ccccccceeEEEe-----ee----ccccccccceeeEEEecceeeecccCCCCC---CCCCceeEEeecceEE--ecc-c
Q 004783 7 TSQGRMEGWLHLI-----RS----NRIGLQYSRKRYFLLEDHFLKSFKSVPHSK---NEDPVRSAIIDSCIRV--TDN-G 71 (730)
Q Consensus 7 ~~~~~~eGwl~~~-----g~----~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~---~~~P~~~~ii~~~~~v--~~~-g 71 (730)
...+.++|||++. |. .+.+...|++|||||+|+.|.|||.+.... ...|...+.|.||+.. .|. .
T Consensus 8 ~~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~d~~k 87 (279)
T 3a8n_A 8 QGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPEHPK 87 (279)
T ss_dssp --CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCCTTSSS
T ss_pred CCceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEeccccCC
Confidence 4567799999874 21 123677899999999999999999776421 1367888888888885 232 3
Q ss_pred ----ccee--cc---cccCCCHHHHHHHHHHHHHHHH
Q 004783 72 ----RESI--HR---KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 72 ----~~~~--h~---~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
|++. .| .|.|.|.+||..|++||..|+.
T Consensus 88 Kk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~ 124 (279)
T 3a8n_A 88 KDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACA 124 (279)
T ss_dssp SCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 4442 23 7999999999999999999886
No 75
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=98.16 E-value=4.1e-06 Score=80.36 Aligned_cols=94 Identities=20% Similarity=0.406 Sum_probs=71.6
Q ss_pred ccccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec-------cccce---
Q 004783 5 QITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD-------NGRES--- 74 (730)
Q Consensus 5 ~~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~-------~g~~~--- 74 (730)
.||...+-.+||-..+..|+.+.=++.||||+++-.|.|||.+.+.. .+|+.++-+-||-++-| .|++.
T Consensus 21 ~it~iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~~-geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip 99 (165)
T 4bbk_A 21 DITDIPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELEQ-GEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIP 99 (165)
T ss_dssp -----CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGTT-SCCSEEEECTTCEEEEEEETTTTEEEEEEEEE
T ss_pred hhccChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHhc-CCCceEEecCccEEecccccccceeeEEEecC
Confidence 47788889999999999999999899999999999999999999876 79999999999998655 34553
Q ss_pred e-cc----cccCCCHHHHHHHHHHHHHHHH
Q 004783 75 I-HR----KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 75 ~-h~----~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
. +| -|.|.|.++-++||-|.+.|+.
T Consensus 100 ~~~gm~e~~LrcdsE~QYa~WMAAcrLAsk 129 (165)
T 4bbk_A 100 VADGMNEVYLRCDHEDQYARWMAACILASK 129 (165)
T ss_dssp ETTEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred CCCcceeeeeecCCHHHHHHHHHHhhhccc
Confidence 1 23 6999999999999999999976
No 76
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=97.95 E-value=1e-05 Score=83.99 Aligned_cols=87 Identities=16% Similarity=0.207 Sum_probs=61.2
Q ss_pred ccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCce--eE-EeecceE--Ee----------ccc
Q 004783 7 TSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVR--SA-IIDSCIR--VT----------DNG 71 (730)
Q Consensus 7 ~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~--~~-ii~~~~~--v~----------~~g 71 (730)
++..+.+||||+.+..+ .=|++|||||+++.|.||++... ++|-. .+ -++++.+ +. ++|
T Consensus 129 s~~P~~~G~L~~ke~~~---K~WkkRyfvLr~sgLy~~~k~~s---k~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~ 202 (256)
T 3hk0_A 129 SSSPEIQGFLHVKELGK---KSWKKLYVCLRRSGLYCSTKGTS---AAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHG 202 (256)
T ss_dssp TSCEEEEEEEEEECTTS---SCEEEEEEEEETTEEEEESSTTC---CCGGGEEEEECCTTEEEEEESSTHHHHCCSSSEE
T ss_pred CCCCcceeEEEEecCCC---CcceEEEEEEeCCEEEEEecCCC---CccccceEEEEcCCCEEEEecccccccCCCCCCE
Confidence 34557999999988754 33799999999999988886653 33422 22 2555444 11 334
Q ss_pred cceecc----------cccCCCHHHHHHHHHHHHHHHH
Q 004783 72 RESIHR----------KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 72 ~~~~h~----------~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
|.+.|- .|+|.+++++..||.||+.|.-
T Consensus 203 F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~ 240 (256)
T 3hk0_A 203 LCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKY 240 (256)
T ss_dssp EEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 443322 7899999999999999999963
No 77
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.85 E-value=7e-05 Score=69.60 Aligned_cols=91 Identities=21% Similarity=0.312 Sum_probs=70.1
Q ss_pred cccccceeEEEeeeccccccccceeeEEEecc------eeeecccCCCCC-CCCCceeEEeecceEEeccccc----e--
Q 004783 8 SQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDH------FLKSFKSVPHSK-NEDPVRSAIIDSCIRVTDNGRE----S-- 74 (730)
Q Consensus 8 ~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~------~l~~yk~~p~~~-~~~P~~~~ii~~~~~v~~~g~~----~-- 74 (730)
..+.|+||||+-.--++|.- ||+|||||-.. .|.||+.+...+ +..|-|++-+.-|++|+.-+-+ .
T Consensus 10 e~~vk~G~L~~q~q~~fgkK-Wrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~ 88 (127)
T 2d9w_A 10 DGAVKQGFLYLQQQQTFGKK-WRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDT 88 (127)
T ss_dssp CCSSEEEEEEECBCSSSSCB-CCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCSSC
T ss_pred CccccceEEEecccchhhhh-hheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCCCcc
Confidence 34559999999776689987 99999999875 578899866543 3567777779999998876544 1
Q ss_pred -------ecc--cccCCCHHHHHHHHHHHHHHHHh
Q 004783 75 -------IHR--KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 75 -------~h~--~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
-.+ -|||.+ +|...||.+|-+.+=.
T Consensus 89 ~aF~l~T~er~~~laAe~-~E~~~Wi~~ic~~aF~ 122 (127)
T 2d9w_A 89 SAFFLETKERLYLLAAPA-AERGDWVQAICLLAFS 122 (127)
T ss_dssp EEEEEEESSCEEEEEECH-HHHHHHHHHHHHHHTS
T ss_pred eEEEEEeCCcEEEEEeCc-HHHHHHHHHHHHHhcC
Confidence 111 899996 5899999999988653
No 78
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=97.84 E-value=0.0011 Score=59.42 Aligned_cols=141 Identities=13% Similarity=-0.021 Sum_probs=84.7
Q ss_pred eEEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCCc
Q 004783 187 AIMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGT 266 (730)
Q Consensus 187 ~~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGs 266 (730)
.+.....|+||+++||++|.|.+ ..++|.+.+..+++++.-++. ...+..+. ++ +.. ..|.. +.. ....+.
T Consensus 3 ~~~~~~~i~ap~~~V~~~l~d~~-~~~~w~p~~~~~~~~~~~~~g-~~~~~~~~---~~-g~~-~~~~~-~~~-~~~~~~ 73 (147)
T 2d4r_A 3 EVRAERYIPAPPERVYRLAKDLE-GLKPYLKEVESLEVVAREGAR-TRSRWVAV---AM-GKK-VRWLE-EEE-WDDENL 73 (147)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHH-HHGGGCTTEEEEEEEEEETTE-EEEEEEEE---ET-TEE-EEEEE-EEE-EETTTT
T ss_pred eEEEEEEeCCCHHHHHHHHhChh-hhhhhcccccEEEEEEeCCCc-cEEEEEEE---eC-Cce-EEEEE-EEE-EcCCCc
Confidence 46778899999999999999998 689999999998888764332 33444432 12 111 11221 221 223333
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCcccc-cccchh-hHHHHHHHHHHHHHH
Q 004783 267 YVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYL-QPSSAR-SITIRMLGRVAALRE 344 (730)
Q Consensus 267 yvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip~~-~~~~~~-~i~~~mL~~va~LRe 344 (730)
. +.+..+.- |. + ...+.|.++|.+++ |+|+|.+..+++|.++.. ...... .+-..+-..+.+|++
T Consensus 74 ~-i~~~~~~g---~~-----~--~~~~~~~~~~~~~g--T~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lk~ 140 (147)
T 2d4r_A 74 R-NRFFSPEG---DF-----D--RYEGTWVFLPEGEG--TRVVLTLTYELTIPIFGGLLRKLVQKLMQENVESLLKGLEE 140 (147)
T ss_dssp E-EEEEEEEE---SC-----S--EEEEEEEEEECSSS--EEEEEEEEEECCCTTTTTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred E-EEEEeccC---Ch-----h--heEEEEEEEECCCC--cEEEEEEEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22222221 11 1 22468999998764 999999999999876643 222211 111223345667888
Q ss_pred HHHhc
Q 004783 345 LFRAK 349 (730)
Q Consensus 345 ~~~~~ 349 (730)
++++.
T Consensus 141 ~~e~~ 145 (147)
T 2d4r_A 141 RVLAA 145 (147)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 77653
No 79
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=97.82 E-value=0.00038 Score=64.82 Aligned_cols=139 Identities=11% Similarity=0.052 Sum_probs=91.0
Q ss_pred ceEEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecC---ceEEEEEEEcCCCCCCCCCCceEEEEEEEEEc
Q 004783 186 PAIMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDG---HTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRE 262 (730)
Q Consensus 186 ~~~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~---~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~ 262 (730)
..+.....|++||++||+++.|++ ..++|.+.+.++++++.-++ +......... . .++ .+.|.....+ .
T Consensus 2 ~~~~~s~~i~ap~~~v~~~v~D~~-~~p~~~p~~~~~~v~~~~~~~g~~~~~~~~~~~--~--~~~-~~~~~~~v~~-~- 73 (148)
T 1t17_A 2 HRHVVTKVLPYTPDQLFELVGDVD-AYPKFVPWITGMRTWNGRVDGAVSTVDAEAQVG--F--SFL-REKFATRVRR-D- 73 (148)
T ss_dssp CEEEEEEEESSCTHHHHHHHTTTT-CCSSCCSSCCCCCEEEEEEETTEEEEEEEEECS--T--TSS-CCEEEEEEEE-E-
T ss_pred CEEEEEEEecCCHHHHHHHHHHHh-hHHhhCCCcCeeEEEEecCCCCCceEEEEEEEE--e--cce-eEEEEEEEEE-c-
Confidence 357788899999999999999999 79999999999999986431 3333344431 1 233 3446654443 2
Q ss_pred CCCcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCcccc-cccchhhHHHHHHHHHHH
Q 004783 263 DDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYL-QPSSARSITIRMLGRVAA 341 (730)
Q Consensus 263 ~dGsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip~~-~~~~~~~i~~~mL~~va~ 341 (730)
...+.|.+.+++- | -+ ...|.|.++|.+++ |+|+|.+..+++|.++.. ...+.....-.|+ .+
T Consensus 74 -~~~~~i~~~~~~G---~-f~------~~~g~w~f~~~~~g--t~v~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~ 137 (148)
T 1t17_A 74 -KDARSIDVSLLYG---P-FK------RLNNGWRFMPEGDA--TRVEFVIEFAFKSALLDAMLAANVDRAAGKLI---AC 137 (148)
T ss_dssp -TTTCEEEEEESST---T-SS------CEEEEEEEEEETTE--EEEEEEEEECCSCHHHHHHHHHHHHHHHHHHH---HH
T ss_pred -CCCcEEEEEECCC---C-hh------ccEEEEEEEECCCC--eEEEEEEEEEECcHHHHHHHHHHHHHHHHHHH---HH
Confidence 2234677777642 2 11 23679999998764 999999999999877532 2223333333343 45
Q ss_pred HHHHHHh
Q 004783 342 LRELFRA 348 (730)
Q Consensus 342 LRe~~~~ 348 (730)
+++.+++
T Consensus 138 f~~r~~~ 144 (148)
T 1t17_A 138 FEARAQQ 144 (148)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 80
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=97.68 E-value=0.0019 Score=62.00 Aligned_cols=144 Identities=10% Similarity=-0.026 Sum_probs=93.2
Q ss_pred EEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCCcE
Q 004783 188 IMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTY 267 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGsy 267 (730)
+.-..+|++||++||+++.|++ ..++|.+.+..+++++. +++...+........ . . ..+.|+..+.+. .++.
T Consensus 5 v~~si~I~a~~~~V~~lV~Dve-~yP~~~p~~~~~~vl~~-~~~~~~~rl~~~~~~-~-G-~~~~~ts~~~~d--~~~~- 76 (159)
T 3tl1_A 5 TDNEITIAAPMELVWNMTNDIE-KWPGLFSEYASVEVLGR-DDDKVTFRLTMHPDA-D-G-KVWSWVSERVAD--PVTR- 76 (159)
T ss_dssp EEEEEEESSCHHHHHHHHTCGG-GHHHHCSSEEEEEEEEE-CSSEEEEEEEECCCT-T-S-CCCEEEEEEEEE--TTTT-
T ss_pred eEEEEEecCCHHHHHHHHHhHH-HhhhhhhCceEEEEEec-CCCEEEEEEEEEecc-C-c-eEEEEEEEEEEc--CCCC-
Confidence 4556789999999999999999 79999999999999987 555545444311111 1 1 245777666553 2332
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCcccccccchhhHHHHHHHHHHHHHHHHH
Q 004783 268 VILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFR 347 (730)
Q Consensus 268 vI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip~~~~~~~~~i~~~mL~~va~LRe~~~ 347 (730)
.|.++.+.. . | + ....|.|.++|+++ .|+|++.+..+.++-.|.-.......+--.+-..+++||+.++
T Consensus 77 ~I~~~~~~~-g-P-----f--~~l~g~W~f~p~~~--gt~V~~~~df~~~~~~p~~~~~~~~~~~~~~~~~L~~lK~~~E 145 (159)
T 3tl1_A 77 TVRAQRVET-G-P-----F--QYMNIVWEYAETAE--GTVMRWTQDFAMKPDAPVDDAWMTDNINRNSRTQMALIRDRIE 145 (159)
T ss_dssp EEEEEESSC-T-T-----E--EEEEEEEEEEEETT--EEEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEccC-C-C-----h--hhccCEEEEEECCC--CEEEEEEEEEEecCCCCCCHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 234443421 1 2 2 24568999999975 5999999998888766632111222333334456788998887
Q ss_pred hcc
Q 004783 348 AKQ 350 (730)
Q Consensus 348 ~~~ 350 (730)
+..
T Consensus 146 ~~~ 148 (159)
T 3tl1_A 146 QAA 148 (159)
T ss_dssp HHH
T ss_pred hhh
Confidence 653
No 81
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=97.66 E-value=0.0011 Score=64.49 Aligned_cols=144 Identities=8% Similarity=0.055 Sum_probs=87.8
Q ss_pred EEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCCcE
Q 004783 188 IMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTY 267 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGsy 267 (730)
+....+|+|||++||+++.|++ ..++|.+.+..+++++.- ++...+...+.... .-..+.|...+... .++ -
T Consensus 5 v~~si~I~a~~~~v~~lv~Dv~-~~p~w~p~~~~~~~~~~~-~~~~~~~l~~~~~~---~G~~~~~ts~~~~d--~~~-~ 76 (169)
T 3tvq_A 5 TDNSIVVNAPFELVWDVTNDIE-AWPELFSEYAEAEILRQD-GDGFDFRLKTRPDA---NGRVWEWVSHRVPD--KGS-R 76 (169)
T ss_dssp EEEEEEESSCHHHHHHHHTCGG-GHHHHCTTEEEEEEEEEE-TTEEEEEEEECCCT---TSCCCEEEEEEEEE--GGG-T
T ss_pred EEEEEEecCCHHHHHHHHHhhh-HHHHHHhheeEEEEEecC-CCEEEEEEEEEecC---CCeEEEEEEEEEEc--CCC-c
Confidence 4556789999999999999999 799999999999999873 43222222211111 11234565544332 222 2
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCcccccccchhhHHHHHHHHHHHHHHHHH
Q 004783 268 VILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALRELFR 347 (730)
Q Consensus 268 vI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip~~~~~~~~~i~~~mL~~va~LRe~~~ 347 (730)
.|.++.+... | ++ ...|.|.++|++++ |+|+|....+.++-.|.-.......+--.+-..+++||+.++
T Consensus 77 ~I~~~~l~~g--P-----f~--~~~g~W~f~p~~~g--t~V~~~~df~~~~~~p~~~~~~~~av~~~~~~~L~~LK~~aE 145 (169)
T 3tvq_A 77 TVRAHRVETG--P-----FA--YMNLHWTYRAVAGG--TEMRWVQEFDMKPGAPFDNAHMTAHLNTTTRANMERIKKIIE 145 (169)
T ss_dssp EEEEEESSCT--T-----EE--EEEEEEEEEEETTE--EEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCC--C-----hh--heeeEEEEEECCCC--EEEEEEEEEEecCCCcccHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3344433221 2 22 45679999999765 999999988887655521111222222233445678888887
Q ss_pred hcc
Q 004783 348 AKQ 350 (730)
Q Consensus 348 ~~~ 350 (730)
+..
T Consensus 146 ~~~ 148 (169)
T 3tvq_A 146 DRH 148 (169)
T ss_dssp HHH
T ss_pred hhh
Confidence 543
No 82
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=97.58 E-value=0.0021 Score=61.70 Aligned_cols=147 Identities=10% Similarity=0.008 Sum_probs=90.9
Q ss_pred CCceEEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcC
Q 004783 184 DHPAIMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRED 263 (730)
Q Consensus 184 ~~~~~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~ 263 (730)
....+....+|++||++||+++.|++ ..++|.+.+..+++++.- ++...+.+.... . .+ .+.|...+.+ +.
T Consensus 3 ~M~~v~~si~I~ap~~~V~~~v~D~~-~~p~~~P~~~~~~v~~~~-~~~~~~~~~~~~---~-G~-~~~~~s~~~~--~~ 73 (172)
T 3tfz_A 3 HMRHVEHTVTVAAPADLVWEVLADVL-GYADIFPPTEKVEILEEG-QGYQVVRLHVDV---A-GE-INTWTSRRDL--DP 73 (172)
T ss_dssp CCEEEEEEEEESSCHHHHHHHHHCGG-GHHHHCSSEEEEEEEEEE-TTEEEEEEEEEE---T-TE-EEEEEEEEEE--ET
T ss_pred CCcEEEEEEEeCCCHHHHHHHHHhHH-HHHhhCcccceEEEEecC-CCEEEEEEEEec---C-CE-EEEEEEEEEE--eC
Confidence 45667888899999999999999999 799999999999999864 333333333321 1 11 2234333332 22
Q ss_pred CCcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCc-ccc-cccch---------hhHH
Q 004783 264 DGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWR-SYL-QPSSA---------RSIT 332 (730)
Q Consensus 264 dGsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwi-p~~-~~~~~---------~~i~ 332 (730)
.+. .|.++.++. .|-++ .+.|.|.++|.+++ .|+|++.+..++++-. ... ...+. ..+-
T Consensus 74 ~~~-~i~~~~~~~------~gpf~--~~~g~w~f~~~~~~-~t~V~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~l~ 143 (172)
T 3tfz_A 74 ARR-VIAYRQLET------APIVG--HMSGEWRAFTLDAE-RTQLVLTHDFVTRAAGDDGLVAGKLTPDEAREMLEAVVE 143 (172)
T ss_dssp TTT-EEEEEEEEC------CTTEE--EEEEEEEEEEEETT-EEEEEEEEEEEECCCCTTSSBTTTBCHHHHHHHHHHHHH
T ss_pred CCC-EEEEEEeeC------CCChh--hcEEEEEEEECCCC-cEEEEEEEEEEEcChhHHHhhccccCchhhHHHHHHHHh
Confidence 232 344455532 12222 34579999998644 7999999999876533 211 11111 1222
Q ss_pred HHHHHHHHHHHHHHHhc
Q 004783 333 IRMLGRVAALRELFRAK 349 (730)
Q Consensus 333 ~~mL~~va~LRe~~~~~ 349 (730)
-.+-..+++||+++++.
T Consensus 144 ~~~~~~L~~lk~~aE~~ 160 (172)
T 3tfz_A 144 RNSVADLNAVLGEAERR 160 (172)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHH
Confidence 23445688899998864
No 83
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=97.44 E-value=0.0039 Score=58.48 Aligned_cols=144 Identities=12% Similarity=-0.014 Sum_probs=86.2
Q ss_pred EEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEE-EEEEEcCCCc
Q 004783 188 IMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLR-RYWRREDDGT 266 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~l-R~wrr~~dGs 266 (730)
+.....|+|||++||++|.|++ ...+|.+.+.+.+++ ++.....-.+.+ . .++. -+|... ++...+....
T Consensus 5 i~~~~~i~ap~e~Vw~~l~D~e-~~~~w~p~~~~~~~~---~~~~~~~~~~~~--~--g~~~-~~~~~~~~~~~~~~~~~ 75 (162)
T 2pcs_A 5 GNGSIELKGTVEEVWSKLMDPS-ILSKCIMGCKSLELI---GEDKYKADLQIG--I--AAVK-GKYDAIIEVTDIKPPYH 75 (162)
T ss_dssp EEEEEEEESCHHHHHHHHTCHH-HHHHHSTTEEEEEEE---ETTEEEEEEEEC--C--GGGC-EEEEEEEEEEEEETTTE
T ss_pred EeeEEEecCCHHHHHHHhcCHH-HHHhhCCCceEeEEe---CCCeEEEEEEEE--e--eeEE-EEEEEEEEEEecCCCcE
Confidence 5566789999999999999998 689999887766655 333322222221 1 1222 234332 2223333445
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCcccccccchhhHHHHH-HHHHHHHHHH
Q 004783 267 YVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRM-LGRVAALREL 345 (730)
Q Consensus 267 yvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip~~~~~~~~~i~~~m-L~~va~LRe~ 345 (730)
+.+......- .+.+++ .+.|.++|+.++ .|+|+|.+..+.+|.+..+.........-++ -..+.+|++.
T Consensus 76 ~~~~~~~~~~------~~~~~~---~~~~~l~~~~~~-gT~v~~~~~~~~~g~l~~~~~~l~~~~~~~~~~~~~~~lk~~ 145 (162)
T 2pcs_A 76 YKLLVNGEGG------PGFVNA---EGVIDLTPINDE-CTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISDFFKKIQKE 145 (162)
T ss_dssp EEEEEEEEET------TEEEEE---EEEEEEEESSSS-EEEEEEEEEEEEESGGGGGCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCC------CccEEE---EEEEEEEecCCC-cEEEEEEEEEEECCCHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555443321 233433 568999997554 7999999999999987544332222333333 2445678888
Q ss_pred HHhcc
Q 004783 346 FRAKQ 350 (730)
Q Consensus 346 ~~~~~ 350 (730)
++++.
T Consensus 146 ~e~~~ 150 (162)
T 2pcs_A 146 IAKSK 150 (162)
T ss_dssp HHHC-
T ss_pred hcccC
Confidence 87653
No 84
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.35 E-value=0.00067 Score=63.18 Aligned_cols=91 Identities=23% Similarity=0.331 Sum_probs=60.5
Q ss_pred ccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCC--CCCCceeEE-eecceE--E-----eccccceec
Q 004783 7 TSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSK--NEDPVRSAI-IDSCIR--V-----TDNGRESIH 76 (730)
Q Consensus 7 ~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~--~~~P~~~~i-i~~~~~--v-----~~~g~~~~h 76 (730)
.+.+-+||||+|+...--- .+++|++|++|.+.||+.+-... .+.|+.-++ +.++-. + .++=||+.-
T Consensus 5 ~s~vlkeGWmVH~t~~d~~---rKRHYWrLD~K~Itlf~~e~~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T 81 (129)
T 2d9z_A 5 SSGMVKEGWMVHYTSRDNL---RKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIIT 81 (129)
T ss_dssp CTTSEEEEEEEEEESSCCC---CEEEEEEEESSCEEEESCSSCCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEEC
T ss_pred CCceeecceEEEEccCCcc---ccceeeEecCCeEEEEecCCCCceeceeeHHHhcccccccCccccCCCCCCceEEEEE
Confidence 4667799999999886544 48999999999999999865432 256666543 333311 0 012234322
Q ss_pred c----ccc---------------CCCHHHHHHHHHHHHHHHHh
Q 004783 77 R----KLG---------------ASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 77 ~----~~~---------------a~~~e~a~~W~~a~~~a~~~ 100 (730)
. -.| +..++.|..|..|+++|..-
T Consensus 82 ~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALmP 124 (129)
T 2d9z_A 82 DTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMS 124 (129)
T ss_dssp SSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhccC
Confidence 2 222 22379999999999999873
No 85
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.28 E-value=0.00099 Score=61.81 Aligned_cols=90 Identities=16% Similarity=0.271 Sum_probs=59.1
Q ss_pred ccccccccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEec-------------cc
Q 004783 5 QITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTD-------------NG 71 (730)
Q Consensus 5 ~~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~-------------~g 71 (730)
.-.+.+-+||||+|.+...--+ ++||++|++|.+.||+.+-. ..|.|.+-+.-=+-|+. +=
T Consensus 3 ~~~s~vlkeGW~VH~t~~d~~r---KRHYWrLD~K~Itlf~~e~~---~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hc 76 (125)
T 2coa_A 3 SGSSGTLREGWVVHYSNKDTLR---KRHYWRLDCKCITLFQNNTT---NRYYKEIPLSEILTVESAQNFSLVPPGTNPHC 76 (125)
T ss_dssp CCCCSCSEEEEEEECCSSSCCC---EEEEEEECSSEEEEESSSSC---SSCSEEEETTTCCEEEESCCCSSSCTTSCCEE
T ss_pred CCCCceeecceEEEEccCCccc---cceeeEecCCeEEEEecCCC---CceeeeeehhHeecccccccccccCCCCCCce
Confidence 3456778999999999876655 89999999999999998654 34444433332222221 11
Q ss_pred cceecc----cccC-----------CCHHHHHHHHHHHHHHHHh
Q 004783 72 RESIHR----KLGA-----------SSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 72 ~~~~h~----~~~a-----------~~~e~a~~W~~a~~~a~~~ 100 (730)
||+.-. -+|+ ...+.|..|..|+++|..-
T Consensus 77 FEi~T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqALmP 120 (125)
T 2coa_A 77 FEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALMS 120 (125)
T ss_dssp EEEECSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGGG
T ss_pred EEEEeCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhccC
Confidence 333222 2222 1248899999999999763
No 86
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=97.01 E-value=0.019 Score=53.05 Aligned_cols=139 Identities=14% Similarity=0.056 Sum_probs=77.5
Q ss_pred EEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEE-EEEEEcCCCc
Q 004783 188 IMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLR-RYWRREDDGT 266 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~l-R~wrr~~dGs 266 (730)
+.....|+|||++||+++.|++ ...+|.+.+.+.+ .+++......... . +++. ..|-.. +....+....
T Consensus 15 i~~~~~i~ap~e~Vw~~l~D~~-~~~~w~p~~~~~~----~~~~~~~~~~~~~--~--g~~~-~~~~~~~~~~~~~~~~~ 84 (157)
T 2ns9_A 15 YEGSFEVSKTPEEVFEFLTDPK-RFSRAFPGFKSVE----VEDGSFTIELRLS--L--GPLR-GDARVRASFEDLEKPSK 84 (157)
T ss_dssp EEEEEEESSCHHHHHHHHTCHH-HHGGGSTTEEEEE----EETTEEEEEEEEE--S--SSSE-EEEEEEEEEEEEETTTE
T ss_pred EeeEEEEcCCHHHHHHHHcCHH-HHHhhCCCceEEE----ECCCEEEEEEEEE--E--ccee-EEEEEEEEEEecCCCcE
Confidence 5666789999999999999998 6899998775544 3444322222221 1 1222 123222 2222223333
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCcccccccchhhHHHHHH-HHHHHHHHH
Q 004783 267 YVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRML-GRVAALREL 345 (730)
Q Consensus 267 yvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip~~~~~~~~~i~~~mL-~~va~LRe~ 345 (730)
+.+...... . .+-++ ..+.|.++|.+ + .|+|+|....+.+|.+..+.........-+++ ..+++|++.
T Consensus 85 i~~~~~~~~---~---~~~~~---~~~~~~l~~~~-~-gT~v~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~lk~~ 153 (157)
T 2ns9_A 85 ATVKGSGRG---A---GSTLD---FTLRFAVEPSG-G-GSRVSWVFEGNVGGLAASMGGRVLDSLARRMINDVISGVKRE 153 (157)
T ss_dssp EEEEEEEEC---S---SEEEE---EEEEEEEEEET-T-EEEEEEEEEEEEEEGGGGSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecC---C---CccEE---EEEEEEEEeCC-C-cEEEEEEEEEEECcCHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 433222221 0 11122 34689999986 3 79999999999999765443222223322222 334566666
Q ss_pred HH
Q 004783 346 FR 347 (730)
Q Consensus 346 ~~ 347 (730)
++
T Consensus 154 ~e 155 (157)
T 2ns9_A 154 LG 155 (157)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 87
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=97.00 E-value=0.017 Score=54.41 Aligned_cols=143 Identities=10% Similarity=0.010 Sum_probs=80.3
Q ss_pred ceEEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCC
Q 004783 186 PAIMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDG 265 (730)
Q Consensus 186 ~~~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dG 265 (730)
..+.....|++|+++||+++.|++ ..++|.+.+.+++++ ++.. ...+.+ +|.......|.. +.... ..+
T Consensus 4 ~~v~~s~~I~ap~e~V~~~~~D~e-~~p~w~p~~~~v~~~---~~~~--~~~~~~---~~~G~~~~~~~~-~v~e~-~p~ 72 (155)
T 3ggn_A 4 TVVRDAVTIGKPAEQLYAVWRDLP-GLPLLMTHLRSVEVL---DDKR--SRWTVE---APAPLGTVSWEA-ELTAD-EPG 72 (155)
T ss_dssp CEEEEEEEESSCHHHHHHHHHCGG-GHHHHSTTCCEEEEC---SSSE--EEEEEE---CCTTTCEEEEEE-EEEEE-ETT
T ss_pred cEEEEEEEEcCCHHHHHHHHhCHH-HhHHHhhhceEEEEe---cCCe--eEEEEE---ecCCcceEEEEE-EEEEe-cCC
Confidence 356777889999999999999999 799999999887766 3332 233332 121111223322 22222 234
Q ss_pred cEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCC-Cccccc-ccchhhHHHH-HHHHHHHH
Q 004783 266 TYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKC-WRSYLQ-PSSARSITIR-MLGRVAAL 342 (730)
Q Consensus 266 syvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkG-wip~~~-~~~~~~i~~~-mL~~va~L 342 (730)
.. |..++++-| .. ...|.|.++|.+++..|+|++.+..++.| .+-... ..+. .++-+ +-..+..|
T Consensus 73 ~~-i~~~~~~g~---~~-------~~~g~~~F~~~~~~~gT~V~~~~~~~~~~~~l~~~~~~~~~-~~~~~~v~~~l~r~ 140 (155)
T 3ggn_A 73 KR-IAWRSLPGA---RI-------ENSGEVLFRPAPGARGTEVVVRLTYRPPGGSAGAVIARMFN-QEPSQQLRDDLMRF 140 (155)
T ss_dssp TE-EEEEECTTC---SS-------CEEEEEEEEECSSSSCEEEEEEEEEC-----------------CHHHHHHHHHHHH
T ss_pred CE-EEEEECCCC---Cc-------ceEEEEEEEECCCCCceEEEEEEEEECCCcHHHHHHHHHhh-hhHHHHHHHHHHHH
Confidence 33 445666432 11 13568999999433379999999999866 432222 2232 22233 33557789
Q ss_pred HHHHHhccC
Q 004783 343 RELFRAKQG 351 (730)
Q Consensus 343 Re~~~~~~~ 351 (730)
|++++..-+
T Consensus 141 k~~~e~~~~ 149 (155)
T 3ggn_A 141 KREQELGLE 149 (155)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHhhhh
Confidence 999887643
No 88
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=96.51 E-value=0.06 Score=51.03 Aligned_cols=117 Identities=9% Similarity=0.015 Sum_probs=72.6
Q ss_pred EEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCC-CceEEEEEEEEEcCCCc
Q 004783 188 IMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMK-RRDLLLRRYWRREDDGT 266 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs-~RDFV~lR~wrr~~dGs 266 (730)
+....+|++||++||+++.|++ . |-..+.+....+..+++. .......... +... ...|+....+. .++.
T Consensus 9 v~~s~~I~ap~e~v~~lv~Dve-~---w~~~yp~~~p~~~~~~~~--~~~~~a~l~v-g~~~~~~~~~s~~~~~--~~~~ 79 (161)
T 3p9v_A 9 LNRDLEIPASYDEVFDLLADVP-K---SASHFPKVDKLVDLGNNA--YRWEMEKVGV-DKHAIQSVYACTYHAD--KEAG 79 (161)
T ss_dssp EEEEEEESSCHHHHHHHHTCHH-H---HHTTSTTEEEEEEEETTE--EEEEECCBSS-GGGCBCCEEEEEEEEE--TTTT
T ss_pred EEEEEEEcCCHHHHHHHHhChh-h---hHhhCCCeEEEEEcCCCc--eEEEEEEEee-eeEEEEEEEEEEEEEc--CCCC
Confidence 4556679999999999999987 3 666666666667766652 2222211011 1122 33455544443 2233
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCccccc
Q 004783 267 YVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQ 324 (730)
Q Consensus 267 yvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip~~~ 324 (730)
.|.++.++-| -. ....|.|.++|.+++ .|+|+|.+..++++.++.++
T Consensus 80 -~I~~~~~~g~---~~------~~l~g~w~f~p~~~g-~t~V~~~~~~e~~~pl~~ll 126 (161)
T 3p9v_A 80 -KITWSPIKGE---GN------GVVSGSWTLSAKGDN-ATAVKFQTSAELTVPLPSLL 126 (161)
T ss_dssp -EEEEEECTTS---TT------EEEEEEEEEEESSSS-CEEEEEEEEEEEEECSCGGG
T ss_pred -EEEEEEecCc---cc------eeEEEEEEEEECCCC-eEEEEEEEEEEEcCcchHHH
Confidence 3455555321 11 133579999999765 79999999999998777654
No 89
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=95.96 E-value=0.084 Score=49.53 Aligned_cols=133 Identities=13% Similarity=0.041 Sum_probs=78.4
Q ss_pred EEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCCcE
Q 004783 188 IMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTY 267 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGsy 267 (730)
+....+|+|||++|+++|.|.+ ..++|.+.+..+++++ ++. +-...+. .+ -.+.-|....++++ .
T Consensus 4 v~~si~I~Ap~~~VW~~l~d~~-~~~~w~p~v~~~~~~~--GG~--vR~~~~~----~G-----~~~~Erl~~~D~~~-~ 68 (146)
T 3f08_A 4 TTTSMEIFGSTEQVWQLIGGFN-SLPDWLPYIPSSKLTE--GGR--VRHLANP----DG-----ETIIERLEVFNDKE-R 68 (146)
T ss_dssp EEEEEEESSCHHHHHHHHCSTT-CHHHHCTTCCEEEEEG--GGT--EEEEECT----TS-----CEEEEEEEEEETTT-T
T ss_pred EEEEEEEeCCHHHHHHHHhccc-cHHHhCCCeEEEEEeC--CCe--EEEEEeC----CC-----CEEEEEEEEEeCCC-C
Confidence 5567789999999999999998 5789999999988774 233 3333331 11 13333333333333 2
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEeceEEEEEeC-CCCCeeEEEEEEeeeCCCCcccccccchhhHHHHHHHHHHHHHHHH
Q 004783 268 VILYHSVFHKKCPRQKGSVRACLKSGGYVITPM-NHGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALRELF 346 (730)
Q Consensus 268 vI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl-~~g~~t~VTyi~qvDpkGwip~~~~~~~~~i~~~mL~~va~LRe~~ 346 (730)
.+.++=++- ..| .....+-|.+.|. ++ ..|.|+|....+|.|...... ...+-..+-..+++|++.+
T Consensus 69 ~~~y~iv~g-~~~-------~~~~~~~~~v~p~~~~-~gt~v~w~~~~~p~g~~~~~~---~~~~~~~~~~~L~~Lk~~~ 136 (146)
T 3f08_A 69 YYTYSIMNA-PFP-------VTNYLSTIQVKEGTES-NTSLVEWSGTFTPVAVSDEEA---INLVHGIYSDGLKALQHAF 136 (146)
T ss_dssp EEEEEEEEC-SSS-------EEEEEEEEEEEECSST-TCEEEEEEEEEEESSSCHHHH---HHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEecC-CCc-------eeEEEEEEEEEEecCC-CcEEEEEEEEEEeCCCCHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 223332321 122 3466779999994 44 379999999999866433111 1111112224456666665
Q ss_pred H
Q 004783 347 R 347 (730)
Q Consensus 347 ~ 347 (730)
+
T Consensus 137 e 137 (146)
T 3f08_A 137 L 137 (146)
T ss_dssp T
T ss_pred h
Confidence 4
No 90
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=95.72 E-value=0.046 Score=52.04 Aligned_cols=135 Identities=9% Similarity=0.012 Sum_probs=74.1
Q ss_pred CceEEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCC
Q 004783 185 HPAIMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDD 264 (730)
Q Consensus 185 ~~~~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~d 264 (730)
...+....+|+|+|++|+++|.|++ ..++|++.+..+++--.+...+.+ ..+.. .. ..-.|. ....+.
T Consensus 17 ~~~i~~si~I~Appe~VW~~ltD~~-~~~~W~p~v~~~~~~G~~~~G~~~-~~~~~--~~----~~~~~~----v~~~~p 84 (155)
T 3ijt_A 17 SMKFSFELAVNTKKEDAWTYYSQVN-QWFVWEGDLEQISLEGEFTTGQKG-KMKME--DM----PELAFT----LVEVRE 84 (155)
T ss_dssp CEEEEEEEEESSCHHHHHHHHHCGG-GGGGTSTTEEEEEESSSSSTTCEE-EEEET--TS----CCEEEE----ECCCBT
T ss_pred cEEEEEEEEEcCCHHHHHHHHhCcc-cccccchhhEeeeccCCCCCCCEE-EEEeC--CC----CcEEEE----EEEEeC
Confidence 3466777889999999999999999 689999998765521111112222 12221 11 111111 111133
Q ss_pred CcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCcc--cccccchhhHHHHHHHHHHHH
Q 004783 265 GTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRS--YLQPSSARSITIRMLGRVAAL 342 (730)
Q Consensus 265 GsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip--~~~~~~~~~i~~~mL~~va~L 342 (730)
+..+. .+.. .|. + ...+.|.|+|.+++ +|+|+|-... .|..| ... .+.+.+.-.+-..+++|
T Consensus 85 ~~~~~-~~~~----~p~--~-----~~~~~h~l~p~~~g-gTrvt~~~~~--~G~~~~~~~~-~~~~~i~~~~~~~l~~L 148 (155)
T 3ijt_A 85 NQCFS-DLTA----TPF--G-----NVLFEHEILENPDG-TISLRHSVSL--TDSDTTEEAL-AFLKQIFADVPESVGKL 148 (155)
T ss_dssp TTEEE-EEEE----ETT--E-----EEEEEEEEEECTTS-CEEEEEEEEE--SCCSCCHHHH-HHHHHHHTTHHHHHHHH
T ss_pred CcEEE-EEEe----cCC--e-----EEEEEEEEEEcCCC-cEEEEEEEEE--ECCCcchhHH-HHHHHHHHHHHHHHHHH
Confidence 33221 1211 121 1 22357789998655 7999998877 45443 111 13344444455667788
Q ss_pred HHHHH
Q 004783 343 RELFR 347 (730)
Q Consensus 343 Re~~~ 347 (730)
|++++
T Consensus 149 K~~aE 153 (155)
T 3ijt_A 149 KQILE 153 (155)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 77765
No 91
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=95.54 E-value=0.013 Score=56.22 Aligned_cols=82 Identities=17% Similarity=0.164 Sum_probs=60.7
Q ss_pred cccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEeecceEEeccccce--ecc-----cccCC
Q 004783 10 GRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDNGRES--IHR-----KLGAS 82 (730)
Q Consensus 10 ~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~~g~~~--~h~-----~~~a~ 82 (730)
+-+.|-|.++. | -|+++|+|+|.....-||-..-. ++--+.+.++.+|+|+-.+.+. +|- .|.+.
T Consensus 52 Ilk~G~v~Krk----G-l~~kkR~liLT~~PrL~Yvdp~~---~~~KGeIpls~~l~ve~k~~~~F~I~Tp~RtY~~~d~ 123 (151)
T 1w1g_A 52 ILKMGPVDKRK----G-LFARRRQLLLTEGPHLYYVDPVN---KVLKGEIPWSQELRPEAKNFKTFFVHTPNRTYYLMDP 123 (151)
T ss_dssp EEEEEEEEEEE----T-TEEEEEEEEEETTTEEEEEETTT---TEEEEEECCCTTCEEEESSSSEEEEEETTEEEEEECT
T ss_pred EEEEEEEEecc----c-CcceeEEEEEcCCceEEEEcCcc---ccccceEecCCCeeEEEcCCCEEEEECCCceEEEEcC
Confidence 34889999842 2 45899999999887777764332 4555666689999988877554 322 67775
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 004783 83 SPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 83 ~~e~a~~W~~a~~~a~~~ 100 (730)
...|.+|++||+.|..+
T Consensus 124 -~~~AqeWv~aI~~~~~~ 140 (151)
T 1w1g_A 124 -SGNAHKWCRKIQEVWRQ 140 (151)
T ss_dssp -TSCHHHHHHHHHHHHHH
T ss_pred -ccCHHHHHHHHHHHHHH
Confidence 77899999999999764
No 92
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=95.20 E-value=0.31 Score=46.59 Aligned_cols=138 Identities=13% Similarity=0.081 Sum_probs=78.4
Q ss_pred EEEEEEecCcHHHHHHHHHhCCCCcccccccccee-EEEEeecCce-EEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCC
Q 004783 188 IMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRG-CVVEHLDGHT-DIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDG 265 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~-~VVE~iD~~t-dIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dG 265 (730)
+....+|+|||++||++|.|.+ .. +|.+.+..+ ++++--.++. .-+... . . .+.-|....++++
T Consensus 4 v~~si~I~Ap~~~VW~~v~Df~-~~-~w~P~v~~s~e~~eg~~~~~vGsvR~~-g-----g------~v~Erl~~~D~~~ 69 (160)
T 3p51_A 4 VYNSIVVDAPVERVWSRIRNFH-DF-SWAPSLIKSCKKVGGGGGYSVGARRLL-N-----G------EFLDTLIAYSEIE 69 (160)
T ss_dssp EEEEEEESSCHHHHHHHHCCTT-CC-TTCTTTCCCEEEESSCCTTCTTCEEEE-T-----T------TEEEEEEEEETTT
T ss_pred EEEEEEECCCHHHHHHHHhCcC-CC-eEccCceEEEEEEecCCCCCCCCEEEE-C-----C------EEEEEEEEEcCCC
Confidence 5567789999999999999998 56 999999888 7765321110 111111 1 1 2222222223222
Q ss_pred cEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCcccccccchhhHHHHHHHHHHHHHHH
Q 004783 266 TYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALREL 345 (730)
Q Consensus 266 syvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip~~~~~~~~~i~~~mL~~va~LRe~ 345 (730)
..+.++=++- ..|..++.++ ...+.|.+.|.+++..|.|+|....++.+- ....+.. ..+-..+++|++.
T Consensus 70 -~~~sY~ii~g-~l~~~~~~~~--~y~~~~~v~p~~~~ggt~V~w~~~~~~~~~---~~~~~~~---~~~~~~L~~Lk~~ 139 (160)
T 3p51_A 70 -RRIMYSMDEG-PSPVSSGEIY--NYVGNLHLLPVTIDDTTFVEWSGSWESAST---EAVEYMN---TVYRSLLADLAAE 139 (160)
T ss_dssp -TEEEEEEEEC-STTSSTTTEE--EEEEEEEEEEETTTTEEEEEEEEEEEESCS---HHHHHHH---HHHHHHHHHHHHH
T ss_pred -cEEEEEEecC-CCccccccee--EEEEEEEEEEecCCCCEEEEEEEEEEeCHH---HHHHHHH---HHHHHHHHHHHHH
Confidence 2223222321 2333222344 456789999986334899999999998751 1111211 1233456678777
Q ss_pred HHhc
Q 004783 346 FRAK 349 (730)
Q Consensus 346 ~~~~ 349 (730)
++..
T Consensus 140 ~e~~ 143 (160)
T 3p51_A 140 FTSE 143 (160)
T ss_dssp SCTT
T ss_pred Hhhc
Confidence 7654
No 93
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=95.14 E-value=0.17 Score=46.85 Aligned_cols=140 Identities=10% Similarity=0.040 Sum_probs=78.1
Q ss_pred eEEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCce-EEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCC
Q 004783 187 AIMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHT-DIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDG 265 (730)
Q Consensus 187 ~~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~t-dIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dG 265 (730)
.+....+|+|||++|+++|.|.+ ...+|.+.+..+++++.-++.. .+....+ +... .+..+....++.+
T Consensus 3 ~v~~si~I~ap~e~Vw~~l~d~~-~~~~w~p~v~~~~~~~g~~~~~G~~r~~~~-----~~G~----~~~e~i~~~d~~~ 72 (151)
T 2le1_A 3 TLRRSVEVAAPAADVWTLVGDFS-AIHRWHPQVSAPTLRGASPHTPGAERVFGA-----GTEE----ELVERLVERDESA 72 (151)
T ss_dssp EEEEEEEESSCHHHHHHHHTTSG-GGGGTCTTCCCEEEESSCTTSTTCEEEESS-----SSSS----CEEEEEEEEETTT
T ss_pred eEEEEEEecCCHHHHHHHHhCcC-cHHHhcCCceEEEEECCCCCCCCeEEEEEe-----CCCC----EEEEEEEEEeCCC
Confidence 35667789999999999999998 6799999998888775311111 2222222 1111 2222333333223
Q ss_pred cEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeC--CCCcccccccchhhHHHHHHHHHHHHH
Q 004783 266 TYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDW--KCWRSYLQPSSARSITIRMLGRVAALR 343 (730)
Q Consensus 266 syvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDp--kGwip~~~~~~~~~i~~~mL~~va~LR 343 (730)
. .+.++-+.- ..| + ....+.|.++|.+++ .|+|+|....++ .|-...... +... .+-..+++|+
T Consensus 73 ~-~~~~~~~~g-~~~-----~--~~~~~~~~l~~~~~~-gt~v~w~~~f~~~p~~~~~~~~~-~~~~---~~~~~L~~Lk 138 (151)
T 2le1_A 73 R-RLVYTMPDP-PFP-----I--TNHRAVLEVVPRDDR-HCTVVWTAMFDCSPETARELESV-IGDG---VFAVGLNALA 138 (151)
T ss_dssp T-EEEEEEEEC-SSS-----E--EEEEEEEEEEESSSS-CEEEEEEEEEEECHHHHHHHHHH-TTTT---HHHHHHHHHH
T ss_pred C-EEEEEEecC-CCC-----c--eeEEEEEEEEECCCC-cEEEEEEEEEEecCCCCCHHHHH-HHHH---HHHHHHHHHH
Confidence 2 223333321 111 2 233568999996543 799999999987 332211111 1111 1334567888
Q ss_pred HHHHhcc
Q 004783 344 ELFRAKQ 350 (730)
Q Consensus 344 e~~~~~~ 350 (730)
++++++.
T Consensus 139 ~~~e~~~ 145 (151)
T 2le1_A 139 ERYGRLE 145 (151)
T ss_dssp HHTTTTS
T ss_pred HHhhccc
Confidence 8877653
No 94
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=94.78 E-value=0.28 Score=46.84 Aligned_cols=126 Identities=15% Similarity=0.163 Sum_probs=71.4
Q ss_pred eEEEEEEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCCc
Q 004783 187 AIMAVGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGT 266 (730)
Q Consensus 187 ~~KavgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGs 266 (730)
......+|+++|++||+++.|++ ..++|.+.+++. ++. ++...+.- . .|.. + +.++. ..++.
T Consensus 28 ~~~~si~I~ap~eeVy~~~~D~e-~lP~W~~~l~~~--~~~-~~~~w~a~--~----~p~G--~---v~v~~---~~~~~ 89 (156)
T 2qpv_A 28 SRIIHLSVEKPWAEVYDFAANPG-NMPRWAAGLAGG--LEA-DGEDWIAK--G----GPLG--E---VRVNF---APHNE 89 (156)
T ss_dssp EEEEEEEESSCHHHHHHHHHCGG-GGGGTCGGGTTC--CEE-ETTEEEEE--C----SSSC--E---EEEEE---CCCCS
T ss_pred ceEEEEEEcCCHHHHHHHHHChh-hHHHHHHhhhhh--ccc-CCCcEEEe--c----cCCC--c---EEEEE---ecCCC
Confidence 45667789999999999999999 799999999885 444 33322221 1 1211 1 11111 12222
Q ss_pred EEE--EEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCcccccccchhhHHHHHHHHHHHHHH
Q 004783 267 YVI--LYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALRE 344 (730)
Q Consensus 267 yvI--~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip~~~~~~~~~i~~~mL~~va~LRe 344 (730)
+.+ -..+. + .|.. ..+-|.+.|.+. .|.|+|.+..+|++-.+.+ . .-...+-..+.+||+
T Consensus 90 ~gv~d~~~~l-----~--~g~~----~~~~~rv~p~g~--GTeV~~tl~~~pg~~~~~~----~-~~~~~v~~dL~~LK~ 151 (156)
T 2qpv_A 90 FGVIDHVVTL-----P--DGLK----VYNALRVTPNGS--GTEVSFTLLRLEGMTDEDF----E-QDASAITADLEMLKS 151 (156)
T ss_dssp SCBCCEEEEC-----T--TSCE----EEEEEEEEEETT--EEEEEEEEECCTTCCHHHH----H-HHHHHHHHHHHHHHH
T ss_pred ceEEEEEEec-----C--CCcE----EEEEEEEEeCCC--CEEEEEEEecCCCCChhhh----h-hhHHHHHHHHHHHHH
Confidence 211 11111 0 1211 223477788654 5999999998998765433 1 111123456678888
Q ss_pred HHHh
Q 004783 345 LFRA 348 (730)
Q Consensus 345 ~~~~ 348 (730)
+++.
T Consensus 152 l~E~ 155 (156)
T 2qpv_A 152 LLEA 155 (156)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 7763
No 95
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=94.74 E-value=0.024 Score=53.18 Aligned_cols=70 Identities=17% Similarity=0.371 Sum_probs=53.2
Q ss_pred cceeeEEEecceeeecccCCCC-----CCCCCceeEEeecceEEec-----cccceecc-----cccCCCHHHHHHHHHH
Q 004783 29 SRKRYFLLEDHFLKSFKSVPHS-----KNEDPVRSAIIDSCIRVTD-----NGRESIHR-----KLGASSPEEAAKWIHS 93 (730)
Q Consensus 29 ~~~Ryfvl~g~~l~~yk~~p~~-----~~~~P~~~~ii~~~~~v~~-----~g~~~~h~-----~~~a~~~e~a~~W~~a 93 (730)
.+.|||+|=.+.|-|.+..|.. +++.|++.+.|-- .|| |.|+|.-. .++|.|+||..+||++
T Consensus 44 ~~eR~l~LF~~~Ll~~s~~~~~~~f~~kgklPL~g~~V~~---~ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~ 120 (132)
T 1v61_A 44 KEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNR---LDEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQ 120 (132)
T ss_dssp CCEEEEEECSSCEEEEECSSSSSCCEEEEEECTTTCBCST---TCSSSSSCCCEEEECSSSCEEEECCCCSHHHHHHHHH
T ss_pred ceEEEEEEcCCeEEEEEecCCCceEEEEEEEecceeEEEe---ccccccCccEEEEecCCCceEEEEeCCHHHHHHHHHH
Confidence 3899999999999999988742 2367887666432 122 34555433 7899999999999999
Q ss_pred HHHHHHhC
Q 004783 94 LQEAALKG 101 (730)
Q Consensus 94 ~~~a~~~~ 101 (730)
|+.|+..+
T Consensus 121 L~~~i~~~ 128 (132)
T 1v61_A 121 LNRLTKSG 128 (132)
T ss_dssp HHHHHTTS
T ss_pred HHHHHhhc
Confidence 99998754
No 96
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=93.62 E-value=0.082 Score=48.91 Aligned_cols=85 Identities=15% Similarity=0.242 Sum_probs=55.6
Q ss_pred cceeEEEeeeccccccccceeeEEEecceeeeccc-CCCC----CCCCC---ceeEEeecceEE---------eccccce
Q 004783 12 MEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKS-VPHS----KNEDP---VRSAIIDSCIRV---------TDNGRES 74 (730)
Q Consensus 12 ~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~-~p~~----~~~~P---~~~~ii~~~~~v---------~~~g~~~ 74 (730)
.-.+|.++++++.. +.|||+|..+...+|.. +|.. ....+ |+.+..+..+.+ ++..|-|
T Consensus 15 ~Gt~l~K~~~~~~~----k~r~f~l~~~~~~~w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsI 90 (131)
T 1mai_A 15 KGSQLLKVKSSSWR----RERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSI 90 (131)
T ss_dssp HCEEEEEESSSSCE----EEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEE
T ss_pred cCCeEEEECCCCcc----eeEEEEECCCCCEEEeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEE
Confidence 44577888765432 56999999776666653 3321 11233 344445543432 4556777
Q ss_pred ecc------cccCCCHHHHHHHHHHHHHHHHh
Q 004783 75 IHR------KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 75 ~h~------~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
+|+ .|-|.|.+||..|+..|+..+..
T Consensus 91 iy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~ 122 (131)
T 1mai_A 91 VFKDQRNTLDLIAPSPADAQHWVQGLRKIIHH 122 (131)
T ss_dssp EESSSCCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred EECCCCceEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 777 78999999999999999988653
No 97
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=92.67 E-value=0.095 Score=52.83 Aligned_cols=44 Identities=14% Similarity=0.231 Sum_probs=33.3
Q ss_pred cccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEEe
Q 004783 10 GRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAII 61 (730)
Q Consensus 10 ~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~ii 61 (730)
+-.+|||++.|.. -.+ +++|||||+++.+.||+.++ .+++.|.+
T Consensus 21 ~~~~g~l~~~~~~--~~~-w~~rw~vl~~~~~~~~~~~~-----~~~k~G~L 64 (228)
T 3tfm_A 21 PYFHSFLYMNGGL--MNS-WKRRWCVLKDETFLWFRSKQ-----EALKQGWL 64 (228)
T ss_dssp CCEEEEEEECCTT--TCC-CEEEEEEEETTEEEEESSCC-----CSSEEEEE
T ss_pred CceEEEEeecCcc--ccc-ceEEEEEEeCCEEEEeccCC-----CcceEEEE
Confidence 3479999998764 333 79999999999999999654 45555543
No 98
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=92.58 E-value=6.1 Score=37.25 Aligned_cols=150 Identities=13% Similarity=-0.023 Sum_probs=86.6
Q ss_pred EEEEEEecCcHHHHHHHHH-hCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCCc
Q 004783 188 IMAVGVVDGTSEAIFQTLM-SLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGT 266 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~-d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGs 266 (730)
+..+..|++||++||+++. |.++..++|-+.+..++++|-=.+.-.|.+..+.. -.| + -++.-|.-..+ +..
T Consensus 5 ~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~~Gsir~~~~~~-G~~--~---~~~kErl~~~D-~~~ 77 (157)
T 1tw0_A 5 FRDETSSSVAPAKLYKALTKDSDTIAQKIDGPIQSIELVEGNGGVGTIKKITANE-GDK--T---SFVLQKVDAID-EAN 77 (157)
T ss_dssp EEEEEEESSCHHHHHHHHHHTGGGGGGGSCSSEEEEEEEESSSSTTCEEEEEEEE-TTE--E---EEEEEEEEEEE-TTT
T ss_pred EEEEEEecCCHHHHHHHHhcCcchhhhhHHhhccEEEEEeCCCCCCeEEEEEeeC-CCc--c---ceEEEEEEEEe-ccC
Confidence 4456678999999999998 88745688998999999998521222355555522 101 0 23333333333 333
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCcccccccchhhHHHHHHHHHHHHHHHH
Q 004783 267 YVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALRELF 346 (730)
Q Consensus 267 yvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip~~~~~~~~~i~~~mL~~va~LRe~~ 346 (730)
..+.++-++-+..|. + -....+.|.+.|.+++ .|.|+|.+..++++-..- .+...+.+--.+...+.+|.+|+
T Consensus 78 ~~~~y~iieGd~~~~--~---~~~~~~~~~v~~~~~~-gs~v~w~~~y~~~~~~~~-~~~~~~~~~~~~~~~~k~ie~yl 150 (157)
T 1tw0_A 78 LGYDYSIVGGTGLPE--S---LEKLSFETKVVAGSGG-GSISKVTLKFHTKGDAPL-SDAVRDDALAKGAGFFKAIEGYV 150 (157)
T ss_dssp TEEEEEEEECTTSCT--T---EEEEEEEEEEEECSSS-SEEEEEEEEEEESTTCCC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEecCCCcc--c---eEEEEEEEEEEecCCC-CEEEEEEEEEEECCCCCC-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444454332221 2 2345678889997554 599999999998763320 01111111112334456788888
Q ss_pred HhccC
Q 004783 347 RAKQG 351 (730)
Q Consensus 347 ~~~~~ 351 (730)
-+++.
T Consensus 151 l~~p~ 155 (157)
T 1tw0_A 151 LANPA 155 (157)
T ss_dssp HHCGG
T ss_pred HhCcc
Confidence 77753
No 99
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=91.30 E-value=4.7 Score=38.05 Aligned_cols=148 Identities=8% Similarity=-0.020 Sum_probs=88.7
Q ss_pred EEEEEEecCcHHHHHHHHH-hCCCCcccccc-ccceeEEEEeecC-ceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCC
Q 004783 188 IMAVGVVDGTSEAIFQTLM-SLGASRSVWDF-CFYRGCVVEHLDG-HTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDD 264 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~-d~d~~R~eWD~-~~~e~~VVE~iD~-~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~d 264 (730)
+..+..|++||++||+++. |.++..++|-+ .+..++++|- |+ .-.|....+.+ + .+=-++.-|....+ +
T Consensus 5 ~~~e~~i~ap~~~vw~~~~~d~~~~~pk~~P~~i~s~~~~eG-dgg~Gsvr~~~~~~----G--~~~~~~kErl~~~D-~ 76 (159)
T 1e09_A 5 YESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEG-DGGPGTIKKITFGE----G--SQYGYVKHKIDSID-K 76 (159)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEES-SSSTTCEEEEEECC----S--SSCEEEEEEEEEEE-T
T ss_pred EEEEEEecCCHHHHHHHHhcCccccchhhChhhccEEEEEeC-CCCCceEEEEEecC----C--CCceEEEEEEEEEc-C
Confidence 4456678999999999998 87634689998 6788888875 33 33466666532 1 11023433443333 4
Q ss_pred CcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCc-ccccccchhhHHHHHHHHHHHHH
Q 004783 265 GTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWR-SYLQPSSARSITIRMLGRVAALR 343 (730)
Q Consensus 265 GsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwi-p~~~~~~~~~i~~~mL~~va~LR 343 (730)
....+.++-++-+..+ . .-....+.|.+.|.+++ .|.|+|.+..+++|-. +. ..-...+--.+...+.+|.
T Consensus 77 ~~~~~~y~iieG~~~~---~--~~~~~~~~~~v~~~~~~-gs~v~wt~~y~~~~~~~~~--~~~~~~~~~~~~~~~k~ie 148 (159)
T 1e09_A 77 ENYSYSYTLIEGDALG---D--TLEKISYETKLVASPSG-GSIIKSTSHYHTKGNVEIK--EEHVKAGKEKASNLFKLIE 148 (159)
T ss_dssp TTTEEEEEECCCTTTG---G--GEEEEEEEEEECCCTTS-SEEEEEEEEEEECSSCCCC--HHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEecccCc---c--cceEEEEEEEEEecCCC-CEEEEEEEEEEECCCCCCC--HHHHHHHHHHHHHHHHHHH
Confidence 4455666666433221 0 13455678889998654 6999999999987533 21 1001111112334456888
Q ss_pred HHHHhccC
Q 004783 344 ELFRAKQG 351 (730)
Q Consensus 344 e~~~~~~~ 351 (730)
+|+-+++.
T Consensus 149 ~yll~~~~ 156 (159)
T 1e09_A 149 TYLKGHPD 156 (159)
T ss_dssp HHHHHCTT
T ss_pred HHHHhChh
Confidence 88887764
No 100
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=90.32 E-value=5.9 Score=37.32 Aligned_cols=149 Identities=12% Similarity=-0.017 Sum_probs=85.7
Q ss_pred EEEEEEecCcHHHHHHHHH-hCCCCccccccccceeEEEEeecC-ceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCC
Q 004783 188 IMAVGVVDGTSEAIFQTLM-SLGASRSVWDFCFYRGCVVEHLDG-HTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDG 265 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~-d~d~~R~eWD~~~~e~~VVE~iD~-~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dG 265 (730)
+..+..|++||++||+++. |.++..++|-+.++.++++|- ++ .-.|....+.+ -.| + -++.-|.-..+ +.
T Consensus 6 ~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG-dgg~Gsir~~~~~~-g~~--~---~~~kErl~~~D-~~ 77 (158)
T 2qim_A 6 FQDEYTSTIAPAKLYKALVTDADIIIPKAVETIQSVEIVEG-NGGPGTIKKLTFIE-GGE--S---KYVLHKIEAID-EA 77 (158)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTEEEEEEEES-SSSTTCEEEEEEEE-TTE--E---EEEEEEEEEEE-GG
T ss_pred EEEEEEecCCHHHHHHHHhcCccchhhhHHhhCcEEEEEec-CCCCCeEEEEEEcC-CCc--c---eeEEEEEEEEe-cC
Confidence 4456678999999999998 876346888888999999985 32 22455555522 101 0 13333333232 33
Q ss_pred cEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCcccccccchhhHHHHHHHHHHHHHHH
Q 004783 266 TYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYLQPSSARSITIRMLGRVAALREL 345 (730)
Q Consensus 266 syvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip~~~~~~~~~i~~~mL~~va~LRe~ 345 (730)
...+.++-++-+..| .+ -....+.|.+.|.+++ .|.|+|.+..+++|-..- .+...+.+--.+...+.+|.+|
T Consensus 78 ~~~~~y~iieG~~~~--~~---~~~~~~~~~v~~~~~~-gs~v~wt~~y~~~~~~~~-~~~~~~~~~~~~~~~~k~ie~y 150 (158)
T 2qim_A 78 NLGYNYSIVGGVGLP--DT---IEKISFETKLVEGANG-GSIGKVTIKIETKGDAQP-NEEEGKAAKARGDAFFKAIESY 150 (158)
T ss_dssp GTEEEEEEEEESSCC--CS---EEEEEEEEEEEECSTT-CEEEEEEEEEEESTTCCC-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeccCCc--cc---eEEEEEEEEEEecCCC-CEEEEEEEEEEECCCCCC-CHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444322222 11 2355678889998654 599999999998763320 0111111111233445688888
Q ss_pred HHhccC
Q 004783 346 FRAKQG 351 (730)
Q Consensus 346 ~~~~~~ 351 (730)
+-+++.
T Consensus 151 ll~~p~ 156 (158)
T 2qim_A 151 LSAHPD 156 (158)
T ss_dssp HHHCSS
T ss_pred HHhCcC
Confidence 888764
No 101
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=90.12 E-value=4.2 Score=38.26 Aligned_cols=147 Identities=13% Similarity=-0.053 Sum_probs=84.8
Q ss_pred EEEEEEecCcHHHHHHHHH-hCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCCc
Q 004783 188 IMAVGVVDGTSEAIFQTLM-SLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGT 266 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~-d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGs 266 (730)
+..+..|++||++||+++. |.++..++|-+.+..++++|-=.+.-.|.+..+.. -.| + -++.-|.-..+ +..
T Consensus 5 ~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~~Gsir~~~~~~-G~~--~---~~~kErl~~~D-~~~ 77 (155)
T 1icx_A 5 FENEQSSTVAPAKLYKALTKDSDEIVPKVIEPIQSVEIVEGNGGPGTIKKIIAIH-DGH--T---SFVLHKLDAID-EAN 77 (155)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTEEEEEEEESSSSTTCEEEEEEES-SSS--E---EEEEEEEEEEE-GGG
T ss_pred EEEEEEecCCHHHHHHHHhcCcchhcchhhhhccEEEEEecCCCCCeEEEEEEec-CCc--c---eeEEEEEEEEe-ccC
Confidence 4456678999999999998 87634688888999999998521222455555532 111 0 23333333333 333
Q ss_pred EEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCcccc-cccchhhHHHHHHHHHHHHHHH
Q 004783 267 YVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWRSYL-QPSSARSITIRMLGRVAALREL 345 (730)
Q Consensus 267 yvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwip~~-~~~~~~~i~~~mL~~va~LRe~ 345 (730)
..+.++-++-+..|. + -....+.|.+.|.+++ .|.|+|.+..+++|-.+.- .-....... ...+.+|.+|
T Consensus 78 ~~~~y~iieGd~~~~--~---~~~~~~~~~v~~~~~~-gs~v~w~~~y~~~~~~~~~~~~~~~~~~~---~~~~k~ie~y 148 (155)
T 1icx_A 78 LTYNYSIIGGEGLDE--S---LEKISYESKILPGPDG-GSIGKINVKFHTKGDVLSETVRDQAKFKG---LGLFKAIEGY 148 (155)
T ss_dssp TEEEEEEEEETTSCT--T---EEEEEEEEEEEECGGG-CEEEEEEEEEEESSSSCCHHHHTTHHHHH---HHHHHHHHHH
T ss_pred CEEEEEEEecCCCcc--c---eEEEEEEEEEEecCCC-CEEEEEEEEEEECCCCCCHHHHHHHHHHH---HHHHHHHHHH
Confidence 344444443222221 2 2345678889997543 5999999999987643310 000112222 3345678888
Q ss_pred HHhcc
Q 004783 346 FRAKQ 350 (730)
Q Consensus 346 ~~~~~ 350 (730)
+-+++
T Consensus 149 ll~~p 153 (155)
T 1icx_A 149 VLAHP 153 (155)
T ss_dssp HHHCT
T ss_pred HHhCC
Confidence 87765
No 102
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=89.34 E-value=0.76 Score=43.42 Aligned_cols=79 Identities=18% Similarity=0.139 Sum_probs=46.4
Q ss_pred ccccccccceeeEEEecceeeecc---cCCCCCCCCCceeEEeecceE-E-----eccccceec---c-------cccCC
Q 004783 22 NRIGLQYSRKRYFLLEDHFLKSFK---SVPHSKNEDPVRSAIIDSCIR-V-----TDNGRESIH---R-------KLGAS 82 (730)
Q Consensus 22 ~~~g~~~~~~Ryfvl~g~~l~~yk---~~p~~~~~~P~~~~ii~~~~~-v-----~~~g~~~~h---~-------~~~a~ 82 (730)
||.-+.=-|.|||+|=+..|=|=| ++.....=.-..+.-++|=.+ . --+|+.+.+ | .|+|.
T Consensus 26 ~K~~~kg~qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~~~e~e~~p~~~~l~s~~~G~~~k~~i~~~A~ 105 (140)
T 3qwm_A 26 NKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSSVPGADIKVLINFNAP 105 (140)
T ss_dssp TSCCCTTTTEEEEEEESSCEEEEECCC---CCCCCCCEEEECCTTEEEEEECCSSCTTEEEEEECCTTSCCEEEEEEECS
T ss_pred cccccccccceEEEEecchhhheeecccCCCCCceEEEEEeeecceEEEcccCCCCceEEEEEecCCCCcceEEEEEECC
Confidence 443333338999999999888775 222221111112222333222 1 123555442 2 78999
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 004783 83 SPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 83 ~~e~a~~W~~a~~~a~~~ 100 (730)
|++|.++|+++|+.||..
T Consensus 106 s~~ER~rwi~dL~esI~e 123 (140)
T 3qwm_A 106 NPQDRKKFTDDLRESIAE 123 (140)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999999874
No 103
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=89.10 E-value=2.7 Score=41.17 Aligned_cols=136 Identities=13% Similarity=0.029 Sum_probs=75.6
Q ss_pred EEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCc-eEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCCc---E
Q 004783 192 GVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGH-TDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGT---Y 267 (730)
Q Consensus 192 gvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~-tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGs---y 267 (730)
..|+||+++|++++.|.+ .-..|-+.+..+ +++--++. -.|-+..+.. -+| --++.-|.-..+++.. |
T Consensus 33 ~~I~Apa~~VW~~v~df~-~l~~w~P~V~s~-~~eG~~ggvGsvR~lt~~~-G~p-----~~~vkErL~~~D~~~~~~sY 104 (183)
T 3rt2_A 33 KHIKAPLHLVWSIVRRFD-EPQKYKPFISRC-VVQGKKLEVGSVREVDLKS-GLP-----ATKSTEVLEILDDNEHILGI 104 (183)
T ss_dssp EEESSCHHHHHHHHTCTT-CGGGTCTTEEEE-EESSSCCCTTCEEEEEECC-SST-----TCEEEEEEEEEETTTTEEEE
T ss_pred EEEeCCHHHHHHHHhCcC-chhhcCccceEE-EeeCCCCCCCcEEEEEeCC-CCc-----cceEEEEEEEEECCCCEEEE
Confidence 468999999999999988 578999988887 55321111 1344455532 122 1244444444443332 3
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCC-CCC-eeEEEEEEeee-CCCCcccccccchhhHHHHHHHHHHHHHH
Q 004783 268 VILYHSVFHKKCPRQKGSVRACLKSGGYVITPMN-HGK-KSVVKHMLAID-WKCWRSYLQPSSARSITIRMLGRVAALRE 344 (730)
Q Consensus 268 vI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~-~g~-~t~VTyi~qvD-pkGwip~~~~~~~~~i~~~mL~~va~LRe 344 (730)
.|..- . .| .+. ..+.+.+.|.+ ++. .|.|+|....| +.|+..--...|...+...-|+.|++.-|
T Consensus 105 ~Iieg--~---lp-~~~------y~ati~v~p~~~dG~~gt~V~Ws~~fd~~~g~~~e~~~~~~~~i~~~~L~~L~~~~e 172 (183)
T 3rt2_A 105 RIVGG--D---HR-LKN------YSSTISLHSETIDGKTGTLAIESFVVDVPEGNTKEETCFFVEALIQCNLNSLADVTE 172 (183)
T ss_dssp EEEEE--S---CS-CTT------CEEEEEEEEEEETTEEEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecC--C---cc-eeE------EEEEEEEEEecCCCCCCEEEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322 1 22 233 34566688875 554 79999999999 46664422222333333334444444444
Q ss_pred HHH
Q 004783 345 LFR 347 (730)
Q Consensus 345 ~~~ 347 (730)
-+.
T Consensus 173 ~~~ 175 (183)
T 3rt2_A 173 RLQ 175 (183)
T ss_dssp HHH
T ss_pred HHh
Confidence 433
No 104
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=88.06 E-value=10 Score=35.65 Aligned_cols=141 Identities=7% Similarity=0.022 Sum_probs=78.2
Q ss_pred EEEEEEecCcHHHHHHH-HHhCCCCcccccccc-ceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCC
Q 004783 188 IMAVGVVDGTSEAIFQT-LMSLGASRSVWDFCF-YRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDG 265 (730)
Q Consensus 188 ~KavgvVdAspe~Vfev-L~d~d~~R~eWD~~~-~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dG 265 (730)
+..+..|+|||++||++ +.|.+..+++|-+.+ +.++++|-=.+.-.|.+..+.+ ...+ -++--|....++++
T Consensus 5 ~~~e~~i~a~a~kvw~~~v~d~~~l~pk~~P~~i~s~~~~eGdgg~Gsvr~~~~~~-----g~~~-~~~kErl~~iD~~~ 78 (155)
T 2flh_A 5 FNTQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDGGVGTILIFNFLP-----EVSP-SYQREEITEFDESS 78 (155)
T ss_dssp EEEEEEESSCHHHHHHHHHTSCTTHHHHHCTTTEEEEEEEECSSSTTCEEEEEECT-----TSSS-CEEEEEEEEEETTT
T ss_pred EEEEEEecCCHHHHHHHHhcccccccchhccccceEEEEEcCCCCCCeEEEEEeeC-----CCCC-cEEEEEEEEEeCCC
Confidence 44566789999999999 688884348999855 5668777422333466666622 1233 46666665554443
Q ss_pred c---EEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCC-Ccccccccchh--hHHHHHHHHH
Q 004783 266 T---YVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKC-WRSYLQPSSAR--SITIRMLGRV 339 (730)
Q Consensus 266 s---yvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkG-wip~~~~~~~~--~i~~~mL~~v 339 (730)
. |.|..-.. ...+-+ ...+.+.+.|.+++ .|.|+|....+++| ..+.. .... .... ..+
T Consensus 79 ~~~~y~iieg~~---l~~~~~------~~~~~i~v~p~~~g-gs~v~wt~~y~~~~~~~~~~--~~~~~~~~~~---~~~ 143 (155)
T 2flh_A 79 HEIGLQVIEGGY---LSQGLS------YYKTTFKLSEIEED-KTLVNVKISYDHDSDIEEKV--TPTKTSQSTL---MYL 143 (155)
T ss_dssp TEEEEEEEEEGG---GGTTCS------EEEEEEEEEEEETT-EEEEEEEEEEEC-------C--CHHHHHHHHH---HHH
T ss_pred CEEEEEEEeccc---cccCce------EEEEEEEEEECCCC-CEEEEEEEEEEECCCCccCh--hHhhhHHHHH---HHH
Confidence 2 33433221 101222 33456678887554 79999999999876 43411 1112 2333 334
Q ss_pred HHHHHHHHhc
Q 004783 340 AALRELFRAK 349 (730)
Q Consensus 340 a~LRe~~~~~ 349 (730)
..|.+|+-+.
T Consensus 144 k~ie~yll~~ 153 (155)
T 2flh_A 144 RRLERYLSNG 153 (155)
T ss_dssp HHHHHHHC--
T ss_pred HHHHHHHhhC
Confidence 5777777554
No 105
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=86.07 E-value=8.6 Score=37.78 Aligned_cols=139 Identities=10% Similarity=0.025 Sum_probs=76.4
Q ss_pred EEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCCcEEEEE
Q 004783 192 GVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVILY 271 (730)
Q Consensus 192 gvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGsyvI~~ 271 (730)
..|+||++.|++++.|.+ .-+.|-+.+..+++++--++--.|-+..+.. -.| . -++.-|.-..++. ...+.+
T Consensus 41 ~~I~Apa~~vW~lv~df~-~~~~w~p~I~s~e~~eGdg~vGsVR~~t~~~-G~p--~---~~vkErL~~iD~~-~~~~sY 112 (190)
T 3kl1_A 41 QRIHAPASVVWPLIRRFD-NPERYKHFVKRCRLISGDGDVGSVREVTVIS-GLP--A---STSTERLEFVDDD-HRVLSF 112 (190)
T ss_dssp EEESSCHHHHHHHHHCTT-CGGGTCSSEEEEEEEESSSSTTCEEEEEECS-SSS--C---EEEEEEEEEEETT-TTEEEE
T ss_pred EEecCCHHHHHHHHhCCC-ChhHcccccCEEEEEcCCCCCCeEEEEEecC-CCc--c---ceEEEEEEEEecc-CCEEEE
Confidence 368999999999999998 5778999999998886422223566666533 112 1 2333333333333 222222
Q ss_pred EecCCCCCCCCCCeEEEEEeceEEEEEeC----CCCCeeEEEEEEeee-CCCCcccccccchhhHHHHHHHHHHHHHHHH
Q 004783 272 HSVFHKKCPRQKGSVRACLKSGGYVITPM----NHGKKSVVKHMLAID-WKCWRSYLQPSSARSITIRMLGRVAALRELF 346 (730)
Q Consensus 272 ~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl----~~g~~t~VTyi~qvD-pkGwip~~~~~~~~~i~~~mL~~va~LRe~~ 346 (730)
.=++- ..| ...| .+-..+.|. .++.+|.|+|....| |.|+...-...+...+ .-..+++|++.+
T Consensus 113 ~iieG-~~~-~~~Y------~s~~~v~~~~~~~~~~~gt~V~Ws~~f~~p~g~~~e~~~~~~~~~---~~~gL~~L~~~~ 181 (190)
T 3kl1_A 113 RVVGG-EHR-LKNY------KSVTSVNEFLNQDSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTV---VKLNLQKLGVAA 181 (190)
T ss_dssp EEEEE-SSS-CCSC------EEEEEEEEEEC-CCCCEEEEEEEEEEEECCTTCCHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred EEEec-CCc-cccE------EEEEEEEecccccCCCCcEEEEEEEEEEcCCCCCHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 22221 122 2232 223334453 234489999999999 7777542111222222 234456777766
Q ss_pred Hhc
Q 004783 347 RAK 349 (730)
Q Consensus 347 ~~~ 349 (730)
+..
T Consensus 182 e~~ 184 (190)
T 3kl1_A 182 TSA 184 (190)
T ss_dssp HHS
T ss_pred hcc
Confidence 643
No 106
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=84.95 E-value=0.96 Score=48.18 Aligned_cols=86 Identities=15% Similarity=0.107 Sum_probs=53.0
Q ss_pred ccceeEEEeeeccccccccceeeEEEecceeeecccCCCCCC-CCCc------------eeEEee-cceEEecc-----c
Q 004783 11 RMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKN-EDPV------------RSAIID-SCIRVTDN-----G 71 (730)
Q Consensus 11 ~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~-~~P~------------~~~ii~-~~~~v~~~-----g 71 (730)
.++|.|...... |. .+.|||+|=.++|=+-|++...-. +.+. .+.+|. .++.|++. +
T Consensus 260 i~eG~l~~~~~~--~~--~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e~~~~~~~ 335 (377)
T 3p6a_A 260 VHEGPLTWRVTK--DK--AVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHKA 335 (377)
T ss_dssp EEEEEEEEESSS--SC--EEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGEEEEECTTCTTE
T ss_pred EEECCcEEEecC--CC--eEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhhhccccccccce
Confidence 388888765442 32 378999999998888887753100 1110 011221 12223322 3
Q ss_pred cceecc--------cccCCCHHHHHHHHHHHHHHHHh
Q 004783 72 RESIHR--------KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 72 ~~~~h~--------~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
+.++++ +|.|.|.+|-..||++|++|++.
T Consensus 336 ~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~ 372 (377)
T 3p6a_A 336 FYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGS 372 (377)
T ss_dssp EEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred eEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHh
Confidence 333332 69999999999999999999984
No 107
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=84.87 E-value=0.99 Score=49.12 Aligned_cols=83 Identities=23% Similarity=0.183 Sum_probs=51.5
Q ss_pred ccceeEEEeeeccccccccceeeEEEecceeeecccCCCCC----CCCCceeEEeecceEEe---ccccceecc----cc
Q 004783 11 RMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSK----NEDPVRSAIIDSCIRVT---DNGRESIHR----KL 79 (730)
Q Consensus 11 ~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~----~~~P~~~~ii~~~~~v~---~~g~~~~h~----~~ 79 (730)
.++|.|+++...+ .+.|||+|=...|=+-|++.... ...|+....|.-. ++ .+++++... .|
T Consensus 245 i~~g~l~~~~~~~-----~~~r~~fLF~d~Ll~~k~~~~~~y~~k~~i~L~~l~v~~~--~~~~~~~~f~i~~~~~~~~l 317 (434)
T 3mpx_A 245 LKEGTLMKVTGKN-----RRPRHLFLMNDVLLYTYPQKDGKYRLKNTLAVANMKVSRP--VMEKVPYALKIETSESCLML 317 (434)
T ss_dssp EECCEEEEEETTE-----EEEEEEEEESSEEEEEEECTTSCEEEEEEEEC-----CCC--CCTTSCSEEEEECSSCEEEE
T ss_pred EecceEEEEeCCC-----ceEEEEEEECCEEEEEEecCCCeEEEEEEEEcCCcEEEec--CCCCCCeeEEEecCCeEEEE
Confidence 3899998875432 37899999999998888654321 1223322222100 11 134555333 89
Q ss_pred cCCCHHHHHHHHHHHHHHHHh
Q 004783 80 GASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 80 ~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|++|..+|+++|+.|+++
T Consensus 318 ~a~s~~ek~~W~~~i~~ai~e 338 (434)
T 3mpx_A 318 SASSCAERDEWYGCLSRALPE 338 (434)
T ss_dssp ECSSHHHHHHHHHHHHHC---
T ss_pred ecCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999874
No 108
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=83.21 E-value=3.3 Score=44.88 Aligned_cols=85 Identities=21% Similarity=0.258 Sum_probs=52.9
Q ss_pred cceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEE-eecceEEe--------------ccccceec
Q 004783 12 MEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAI-IDSCIRVT--------------DNGRESIH 76 (730)
Q Consensus 12 ~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~i-i~~~~~v~--------------~~g~~~~h 76 (730)
++|.|..+.. +-|. .+.|||+|=...|=+=|++......--.+.-| +... .|+ .++|++.+
T Consensus 259 ~~G~l~~~~~-~~~k--~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~-~v~~~~d~~~~~~~~~~~~~F~i~~ 334 (402)
T 2dfk_A 259 YTGEMAWIYQ-PYGR--NQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKY-EVIDIEDGRDDDFNVSMKNAFKLHN 334 (402)
T ss_dssp EEEEEEEESS-TTCC--CEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGE-EEEECCSEECSSSCCEESSEEEEEE
T ss_pred EeceEEEEec-cCCc--eEEEEEEeeCCEEEEEEeccccCCceEEeeeeeccce-EEEecCCCCccccccccceeEEEEE
Confidence 7777776543 1233 37899999998887777654211111111111 2222 222 14566654
Q ss_pred c------cccCCCHHHHHHHHHHHHHHHHh
Q 004783 77 R------KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 77 ~------~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
. .|.|.|++|-.+|+++|+.|+.+
T Consensus 335 ~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~ 364 (402)
T 2dfk_A 335 KETEEVHLFFAKKLEEKIRWLRAFREERKM 364 (402)
T ss_dssp SSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 3 78999999999999999999774
No 109
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=83.07 E-value=1.9 Score=49.10 Aligned_cols=84 Identities=21% Similarity=0.192 Sum_probs=56.0
Q ss_pred cceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEE-eecceEEec-----------cccceecc--
Q 004783 12 MEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAI-IDSCIRVTD-----------NGRESIHR-- 77 (730)
Q Consensus 12 ~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~i-i~~~~~v~~-----------~g~~~~h~-- 77 (730)
++|.+......+ +. .+.|||+|=.+.|=+-|++... -=++..| +......+. +++++.|.
T Consensus 408 ~~G~l~~~~~~~-~~--~~~r~~fLF~d~Ll~~k~~~~~---y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~ 481 (587)
T 3ky9_A 408 IDGELKITSVER-RS--KMDRYAFLLDKALLICKRRGDS---YDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQG 481 (587)
T ss_dssp EEEEEEEECSSC-CS--CEEEEEEEETTEEEEEEEETTE---EEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC
T ss_pred EEeeEEEEeccC-CC--cceEEEEEECCEEEEEEecCCE---EEeeeeechhhceeeecCCCCcccccccceeEEEEcCC
Confidence 788887654332 22 3789999999998888877431 1122222 333322211 45776553
Q ss_pred ----cccCCCHHHHHHHHHHHHHHHHhC
Q 004783 78 ----KLGASSPEEAAKWIHSLQEAALKG 101 (730)
Q Consensus 78 ----~~~a~~~e~a~~W~~a~~~a~~~~ 101 (730)
+|.|.|.+|..+||++|+.|++..
T Consensus 482 ~~~~~L~A~S~eeK~~Wi~~I~~ai~~~ 509 (587)
T 3ky9_A 482 AQGYELFFKTRELKKKWMEQFEMAISNI 509 (587)
T ss_dssp ---CEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHHHhhhh
Confidence 899999999999999999999854
No 110
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=82.34 E-value=1.8 Score=45.93 Aligned_cols=84 Identities=17% Similarity=0.202 Sum_probs=50.8
Q ss_pred cceeEEEeeeccccccccceeeEEEecceeeecccCCCC--------------CCCCCceeEE-eecceEEec-----cc
Q 004783 12 MEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHS--------------KNEDPVRSAI-IDSCIRVTD-----NG 71 (730)
Q Consensus 12 ~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~--------------~~~~P~~~~i-i~~~~~v~~-----~g 71 (730)
++|.|.....+ |. .+.||++|=...|=+-|++... ...--.+..| +.+. .|++ ++
T Consensus 255 ~~G~l~~~~~~--~~--~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~-~v~~~~~~~~~ 329 (368)
T 1xcg_A 255 HEGPLTWRISK--DK--TLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAV-LIRSVATDKRA 329 (368)
T ss_dssp EEEEEEECCSS--SC--CCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGE-EEEECSSCSSE
T ss_pred eecceEeeecC--CC--eeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccce-eeecccCCCce
Confidence 77777754322 22 4789999988888777765421 0000001111 2222 2322 34
Q ss_pred cceec----c-----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 72 RESIH----R-----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 72 ~~~~h----~-----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
+.+++ | .|.|.|++|...|+++|+.|++.
T Consensus 330 f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 330 FFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp EEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 66543 2 78999999999999999999874
No 111
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=82.19 E-value=2.4 Score=45.82 Aligned_cols=88 Identities=19% Similarity=0.118 Sum_probs=54.6
Q ss_pred cceeEEEeeeccccccccceeeEEEecceeeecccCCCCC---CCCCceeEEeecceEEe------ccccceecc-----
Q 004783 12 MEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSK---NEDPVRSAIIDSCIRVT------DNGRESIHR----- 77 (730)
Q Consensus 12 ~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~---~~~P~~~~ii~~~~~v~------~~g~~~~h~----- 77 (730)
++|.|......+-. .+.||++|=...|=+-|++...- ...|+....|....--+ .++|+++|.
T Consensus 236 ~~G~l~~~~~~~~~---~~~~~~fLF~d~Ll~~k~k~~~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~ 312 (406)
T 2vrw_B 236 IDGELKITSVERRS---KTDRYAFLLDKALLICKRRGDSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQG 312 (406)
T ss_dssp EEEEEEEECSSCCS---CEEEEEEEESSEEEEEEEETTEEEEEEEEETTTEEEEC--------CTTCEEEEEEETTCSCE
T ss_pred ccccEEEEecCCCc---cceEEEEecCCEEEEEEecCCceEEEEEecccceeeeecCCCCccCCccceeeEEEecCCCce
Confidence 78888776432211 37899999888887777764210 12233322221110000 145666652
Q ss_pred -cccCCCHHHHHHHHHHHHHHHHhCC
Q 004783 78 -KLGASSPEEAAKWIHSLQEAALKGG 102 (730)
Q Consensus 78 -~~~a~~~e~a~~W~~a~~~a~~~~~ 102 (730)
.|.|.|.+|..+|+++|+.|+....
T Consensus 313 ~~l~a~s~~ek~~W~~~i~~ai~~~~ 338 (406)
T 2vrw_B 313 YELFFKTRELKKKWMEQFEMAISNIY 338 (406)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred EEEeCCCHHHHHHHHHHHHHHHhhhh
Confidence 8899999999999999999998643
No 112
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=81.91 E-value=10 Score=37.92 Aligned_cols=134 Identities=13% Similarity=0.055 Sum_probs=75.8
Q ss_pred EecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCc-eEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCC---cEE
Q 004783 193 VVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGH-TDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDG---TYV 268 (730)
Q Consensus 193 vVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~-tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dG---syv 268 (730)
.|+|||++|++++.|.+ ....|-+.+..++ ++- ++. -.|-+..+.. -+| --++.-|.-..+++. +|.
T Consensus 59 ~I~ApadkVW~lV~Df~-~l~kW~P~V~s~e-veG-dg~vGsVR~vt~~~-G~p-----~~~vkErL~~lDde~~~~sYs 129 (205)
T 3oqu_A 59 HIKAPLHLVWSLVRRFD-QPQKYKPFVSRCT-VIG-DPEIGSLREVNVKS-GLP-----ATTSTERLELLDDEEHILGIK 129 (205)
T ss_dssp EESSCHHHHHHHHTCTT-CGGGTCTTEEEEE-CCS-SCCTTCEEEEEECT-TSS-----CSEEEEEEEEEETTTTEEEEE
T ss_pred EEcCCHHHHHHHHhCcC-ChhHcCccceEEE-eeC-CCCCCcEEEEEEcC-CCc-----cceEEEEEEEEECCCCEEEEE
Confidence 68999999999999998 5779999888875 332 211 1344455532 122 124444444443333 244
Q ss_pred EEEEecCCCCCCCCCCeEEEEEeceEEEEEeCC-CC-CeeEEEEEEeee-CCCCcccccccchhhHHHHHHHHHHHHHHH
Q 004783 269 ILYHSVFHKKCPRQKGSVRACLKSGGYVITPMN-HG-KKSVVKHMLAID-WKCWRSYLQPSSARSITIRMLGRVAALREL 345 (730)
Q Consensus 269 I~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~-~g-~~t~VTyi~qvD-pkGwip~~~~~~~~~i~~~mL~~va~LRe~ 345 (730)
|..- ..| .+. ..+.+.+.|.+ ++ ..|.|.+-...| |-|+.-.-...+...+...-|..|+...|-
T Consensus 130 IieG-----~lp-v~~------Y~ati~V~p~~~dG~~~T~v~ws~~~D~p~g~t~e~~~~~v~~v~~~gL~~L~~~~e~ 197 (205)
T 3oqu_A 130 IIGG-----DHR-LKN------YSSILTVHPEIIEGRAGTMVIESFVVDVPQGNTKDETCYFVEALIRCNLKSLADVSER 197 (205)
T ss_dssp EEEE-----SSS-CTT------CEEEEEEEEECCCC-CEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEec-----Ccc-eeE------EEEEEEEEEccCCCCceEEEEEEEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4432 122 333 34566688986 34 379999999999 678765322223333333344444454444
Q ss_pred HH
Q 004783 346 FR 347 (730)
Q Consensus 346 ~~ 347 (730)
+.
T Consensus 198 ~~ 199 (205)
T 3oqu_A 198 LA 199 (205)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 113
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=81.55 E-value=1.8 Score=49.09 Aligned_cols=88 Identities=17% Similarity=0.072 Sum_probs=53.8
Q ss_pred cccceeEEEeeeccccccccceeeEEEecceeeecccCCCCC--------------------CCCCceeEEeecceEEec
Q 004783 10 GRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSK--------------------NEDPVRSAIIDSCIRVTD 69 (730)
Q Consensus 10 ~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~--------------------~~~P~~~~ii~~~~~v~~ 69 (730)
..+||.|.....+ |. .+.|||+|=.++|=+-|++.+.- ...|+..++|.-.. -++
T Consensus 412 LI~eG~l~~~~~~--~k--~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e~~-~d~ 486 (536)
T 3odw_A 412 LVHEGPLTWRVTK--DK--AVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVA-TDH 486 (536)
T ss_dssp EEEEEEEEEESCC-------CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGEEEEECT-TCT
T ss_pred eeeecceEEEecC--CC--eeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccceeeccc-ccC
Confidence 3378888776532 22 37899999999888888764310 01222222221100 012
Q ss_pred cccceecc--------cccCCCHHHHHHHHHHHHHHHHhCC
Q 004783 70 NGRESIHR--------KLGASSPEEAAKWIHSLQEAALKGG 102 (730)
Q Consensus 70 ~g~~~~h~--------~~~a~~~e~a~~W~~a~~~a~~~~~ 102 (730)
+++.+++. +|.|.|.+|...||++|+.|++...
T Consensus 487 ~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~ 527 (536)
T 3odw_A 487 KAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLK 527 (536)
T ss_dssp TEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSC
T ss_pred CceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCC
Confidence 23444332 7999999999999999999999653
No 114
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=81.41 E-value=2.9 Score=46.01 Aligned_cols=86 Identities=21% Similarity=0.225 Sum_probs=52.8
Q ss_pred cceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCce-eEEeecceEE--ec-----------cccceecc
Q 004783 12 MEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVR-SAIIDSCIRV--TD-----------NGRESIHR 77 (730)
Q Consensus 12 ~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~-~~ii~~~~~v--~~-----------~g~~~~h~ 77 (730)
++|.|..+... -|. .+.|||+|=...|=+=|++......-=.+ .+-++....+ +| ++|++.+.
T Consensus 336 ~~G~l~~~~~~-~~~--~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~ 412 (466)
T 2pz1_A 336 YSGELTRVTQP-QAK--SQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRG 412 (466)
T ss_dssp EEEEEEEECTT-TCC--EEEEEEEEETTEEEEEEECSSCTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECS
T ss_pred EeeeEEEEecC-CCC--eeEEEEEEECCEEEEEEeccccCCceEEeeeeeccceEEEeCCCCcccccccccceeEEEEeC
Confidence 77777766431 233 37899999998887777654211111111 1112222221 11 34565543
Q ss_pred ------cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 ------KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 ------~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|++|-.+|+++|+.|+.+
T Consensus 413 ~~~~~~~l~a~s~~eK~~W~~~i~~a~~~ 441 (466)
T 2pz1_A 413 ATGDSHLLCTRKPEQKQRWLKAFAREREQ 441 (466)
T ss_dssp SSCCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999885
No 115
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=81.22 E-value=1.9 Score=46.64 Aligned_cols=88 Identities=18% Similarity=0.147 Sum_probs=54.8
Q ss_pred ccceeEEEeeeccccccccceeeEEEecceeeecccCCCCC--------------------CCCCceeEEeecceEEecc
Q 004783 11 RMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSK--------------------NEDPVRSAIIDSCIRVTDN 70 (730)
Q Consensus 11 ~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~--------------------~~~P~~~~ii~~~~~v~~~ 70 (730)
.++|.|.....+ |. .+.||++|=.++|=+-|++.... ...|+..+.|.. .--+.+
T Consensus 296 i~eG~l~~~~~~--~~--~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~-~~~~~~ 370 (418)
T 3t06_A 296 IHEGPLTWRISK--DK--TLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRS-VATDKR 370 (418)
T ss_dssp EEEEEEEECCBT--TB--CCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEE-CSSCSS
T ss_pred EEeceEEEEeCC--CC--eEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceecc-ccccCc
Confidence 378888765532 22 36899999999888888764210 012222222210 001223
Q ss_pred ccceecc---------cccCCCHHHHHHHHHHHHHHHHhCCC
Q 004783 71 GRESIHR---------KLGASSPEEAAKWIHSLQEAALKGGP 103 (730)
Q Consensus 71 g~~~~h~---------~~~a~~~e~a~~W~~a~~~a~~~~~~ 103 (730)
++.+++. +|.|.|.+|...||++|+.|+..+.+
T Consensus 371 ~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~~~ 412 (418)
T 3t06_A 371 AFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNAHH 412 (418)
T ss_dssp EEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC--
T ss_pred eEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcCcc
Confidence 4666552 79999999999999999999886544
No 116
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=79.53 E-value=3.3 Score=43.73 Aligned_cols=80 Identities=23% Similarity=0.266 Sum_probs=52.8
Q ss_pred cceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCC--------c-eeEEeecceEEe-------cccccee
Q 004783 12 MEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDP--------V-RSAIIDSCIRVT-------DNGRESI 75 (730)
Q Consensus 12 ~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P--------~-~~~ii~~~~~v~-------~~g~~~~ 75 (730)
++|.|...| . .+.|||+|=...|=+-|++.... ..| + ..+-++.....+ .++|++.
T Consensus 249 ~eG~l~~~g-----~--~~~~~~fLF~d~Ll~~k~~~~~~-~~~~~~~~~y~~k~~i~l~~~~v~~~~d~~~~~~~F~i~ 320 (354)
T 1dbh_A 249 MEGTLTRVG-----A--KHERHIFLFDGLMICCKSNHGQP-RLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEII 320 (354)
T ss_dssp EEEEEEETT-----C--SSCEEEEEESSEEEEEEECTTCC-CCTTSCCCSEEEEEEEESCSCEEEECCCSSSCCSEEEEC
T ss_pred EEeeEEEEe-----c--CceEEEEEeCCEEEEEecCCCCC-CCCCCCCcceeEEEEEeccceEEEeCCcccccCccEEEe
Confidence 677777764 2 37899999998888877763210 111 1 222244433322 1457765
Q ss_pred cc-----cccCCCHHHHHHHHHHHHHHHH
Q 004783 76 HR-----KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 76 h~-----~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
+. .|-|.|++|..+|+++|+.|..
T Consensus 321 ~~~~~~~~l~a~s~~ek~~W~~~i~~~~~ 349 (354)
T 1dbh_A 321 LKDENSVIFSAKSAEEKNNWMAALISLQY 349 (354)
T ss_dssp CTTSCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 54 7899999999999999999965
No 117
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=79.48 E-value=7 Score=39.12 Aligned_cols=139 Identities=10% Similarity=0.038 Sum_probs=73.2
Q ss_pred EEecCcHHHHHHHHHhCCCCccccccccceeEEEEeecCc-eEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCCcEEEE
Q 004783 192 GVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGH-TDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDGTYVIL 270 (730)
Q Consensus 192 gvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD~~-tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dGsyvI~ 270 (730)
..|+||+++|++++.|.+ .-..|-+.+..+++++--++. -.|-+..+.. -+| -..+.-|.-..+++. ..+.
T Consensus 60 ~~I~ApadkVW~lv~Df~-~l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~~-G~p-----~~~vkErL~~lDde~-~~~s 131 (208)
T 3jrs_A 60 QRIHAPPETVWSVVRRFD-RPQIYKHFIKSCNVSEDFEMRVGCTRDVNVIS-GLP-----ANTSRERLDLLDDDR-RVTG 131 (208)
T ss_dssp EEESSCHHHHHHHHTCTT-CGGGTCTTEEEEECCTTCCCSTTCEEEEEECT-TSS-----CCEEEEEEEEEETTT-TEEE
T ss_pred EEEeCCHHHHHHHHhCcC-ChhHccccceEEEEecCCCCCCCeEEEEEecC-CCc-----cceEEEEEEEEeccC-CEEE
Confidence 358999999999999998 578999988877766421111 1244444432 122 124444444443333 2222
Q ss_pred EEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeee------CCCCcccccccchhhHHHHHHHHHHHHHH
Q 004783 271 YHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAID------WKCWRSYLQPSSARSITIRMLGRVAALRE 344 (730)
Q Consensus 271 ~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvD------pkGwip~~~~~~~~~i~~~mL~~va~LRe 344 (730)
+.=++ ... |.++|. +...+.|..++.+|.|+|....+ |.|+...-...+...+ .-..+++|++
T Consensus 132 YsIie-G~l-pv~~Y~------sti~V~p~~~g~~t~V~Wt~~fes~~~D~p~g~~~e~a~~~~~~v---y~~gL~~L~~ 200 (208)
T 3jrs_A 132 FSITG-GEH-RLRNYK------SVTTVHRFEKEEEEERIWTVVLESYVVDVPEGNSEEDTRLFADTV---IRLNLQKLAS 200 (208)
T ss_dssp EEEEE-SSS-SCTTCE------EEEEEEEEEC-----CEEEEEEEEEEEECCTTSCHHHHHHHHHHH---HHHHHHHHHH
T ss_pred EEEee-CCc-ceeeEE------EEEEEEEccCCCccEEEEEEEEEEccCCCCCCCCHHHHHHHHHHH---HHHHHHHHHH
Confidence 22222 112 345553 46668887444578999998877 6666432111222111 2245667777
Q ss_pred HHHhc
Q 004783 345 LFRAK 349 (730)
Q Consensus 345 ~~~~~ 349 (730)
.+++.
T Consensus 201 ~~e~~ 205 (208)
T 3jrs_A 201 ITEAM 205 (208)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 77653
No 118
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=78.92 E-value=2 Score=41.95 Aligned_cols=83 Identities=20% Similarity=0.242 Sum_probs=50.7
Q ss_pred cceeEEEeeeccccccccceeeEEEecceeeecccCCCCC---C---CCCceeEEeecceEE----eccccceecc----
Q 004783 12 MEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSK---N---EDPVRSAIIDSCIRV----TDNGRESIHR---- 77 (730)
Q Consensus 12 ~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~---~---~~P~~~~ii~~~~~v----~~~g~~~~h~---- 77 (730)
+||=|+....+ |. ...||++|=..+|=|=+++.+.- . ..|+ +-+.+.+.- ++.|+-.++.
T Consensus 73 ~eG~L~~k~~~--~~--~~d~~~fLf~D~Ll~~~~~~~ky~~~~~~~~~pv--i~L~~~~vre~a~d~~~~fli~~~~~g 146 (185)
T 2lg1_A 73 RDGSVFLKNAA--GR--LKEVQAVLLTDILVFLQEKDQKYIFASLDQKSTV--ISLKKLIVREVAHEEKGLFLISMGMTD 146 (185)
T ss_dssp EEEEEEEECTT--CC--EEEEEEEEESSEEECCEEETTEEECCCCSSSCSE--EESSSCEEECCSSCSSEEEEECCSSSC
T ss_pred eeceEEEeccC--CC--eeeEEEEeecCEEEEEEecCCEEEEEcccCCCCe--EeecceEEeccCCCCCeEEEEEecCCC
Confidence 67766644332 22 37899999888886666554310 0 1121 012333221 2245544442
Q ss_pred ----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 ----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 ----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
+|-|.|++|-..||++|+.|++.
T Consensus 147 ~~~yel~a~s~~er~~W~~~I~~Ai~~ 173 (185)
T 2lg1_A 147 PEMVEVHASSKEERNSWIQIIQDTINT 173 (185)
T ss_dssp CCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 78899999999999999999984
No 119
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=78.24 E-value=0.43 Score=52.88 Aligned_cols=84 Identities=15% Similarity=0.108 Sum_probs=0.0
Q ss_pred ccceeEEEeeeccccccccceeeEEEecceeeecccCCCC---------------------CCCCCceeEEeecce--EE
Q 004783 11 RMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHS---------------------KNEDPVRSAIIDSCI--RV 67 (730)
Q Consensus 11 ~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~---------------------~~~~P~~~~ii~~~~--~v 67 (730)
.++|.|++.+. .+.|||+|=..+|=+-|.+... ....|+..+.|.... .-
T Consensus 254 i~eG~l~~~~~-------~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~d~~~ 326 (510)
T 3jzy_A 254 LHSGKLYKTKS-------NKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTDPSS 326 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEeceEEEcCC-------CcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEEeccCCCCc
Confidence 37888876533 2689999988888777744321 011232222221110 00
Q ss_pred eccccceecc----cccCCCHHHHHHHHHHHHHHHHhC
Q 004783 68 TDNGRESIHR----KLGASSPEEAAKWIHSLQEAALKG 101 (730)
Q Consensus 68 ~~~g~~~~h~----~~~a~~~e~a~~W~~a~~~a~~~~ 101 (730)
..+.|++.+. .|.|.|.+|...|+++|+.|+++.
T Consensus 327 ~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 364 (510)
T 3jzy_A 327 DEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQY 364 (510)
T ss_dssp --------------------------------------
T ss_pred cccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 1234777665 899999999999999999998853
No 120
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=77.84 E-value=3 Score=44.30 Aligned_cols=88 Identities=15% Similarity=0.263 Sum_probs=54.4
Q ss_pred cceeEEEeeeccccc--------cccceeeEEEecceeeecccCCCCC------CCCCceeEE-eecceEEec------c
Q 004783 12 MEGWLHLIRSNRIGL--------QYSRKRYFLLEDHFLKSFKSVPHSK------NEDPVRSAI-IDSCIRVTD------N 70 (730)
Q Consensus 12 ~eGwl~~~g~~~~g~--------~~~~~Ryfvl~g~~l~~yk~~p~~~------~~~P~~~~i-i~~~~~v~~------~ 70 (730)
++|.+.....++-|. .=.+.||++|=...|=+=|++.... ..--.+..| ++ .+.|+| +
T Consensus 212 ~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~-~~~v~e~~~~~~~ 290 (353)
T 1kz7_A 212 MQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMT-AVGITENVKGDTK 290 (353)
T ss_dssp EEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGG-GEEEECCBTTBTT
T ss_pred eecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcc-cceeeEcCCCCCc
Confidence 788887654433441 1136799999888887777764211 010112111 22 223332 3
Q ss_pred ccceec-c-----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 71 GRESIH-R-----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 71 g~~~~h-~-----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|++.+ | .|.|.|+++..+|+++|+.|+.+
T Consensus 291 ~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 326 (353)
T 1kz7_A 291 KFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTS 326 (353)
T ss_dssp EEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 467654 2 78999999999999999999874
No 121
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=76.00 E-value=56 Score=31.21 Aligned_cols=147 Identities=9% Similarity=-0.105 Sum_probs=83.6
Q ss_pred EEEEEEecCcHHHHHHHH-HhCCCCccccccc-cceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCC
Q 004783 188 IMAVGVVDGTSEAIFQTL-MSLGASRSVWDFC-FYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDG 265 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL-~d~d~~R~eWD~~-~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dG 265 (730)
+-.+..|.|||++||+++ .|.+...+.|-+. ++.++++|-=.+.-.|-+..+. .+--++--|.-..+++
T Consensus 11 ~~~ei~i~apa~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdgg~Gsir~~t~~--------g~~~~~kErl~~iD~~- 81 (168)
T 3rws_A 11 SESEYVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDGGPGTIKKLTFV--------GDFGSTKQHIDMVDRE- 81 (168)
T ss_dssp EEEEEEESSCHHHHHHHHHTSHHHHHHHHSTTTEEEEEEEESSSSTTCEEEEEES--------SSSCEEEEEEEEEETT-
T ss_pred EEEEEEecCCHHHHHHHHhcCccccchhhCccccceEEEeeCCCCCCeEEEEEEc--------CCCeEEEEEEEEEccc-
Confidence 444556899999999997 7877336899985 7777888742222346666652 1112444444433333
Q ss_pred cEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCC-c-ccccccc--hhhHHHHHHHHHHH
Q 004783 266 TYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCW-R-SYLQPSS--ARSITIRMLGRVAA 341 (730)
Q Consensus 266 syvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGw-i-p~~~~~~--~~~i~~~mL~~va~ 341 (730)
...+.++=++-+... .. +.......+.+.|.+++ .|.|+|....+++|= . +.= ... .... +...+..
T Consensus 82 ~~~~sY~iiegd~l~---~~-p~~~y~~ti~v~p~~~g-gs~v~wt~~y~~~~~d~~~~~-e~~k~~~~~---~~~~~k~ 152 (168)
T 3rws_A 82 NCAYTYSVYEGIALS---DQ-PLEKIVFEFKLVPTPEE-GCIVKSTTKYYTKGDDIELSK-DYLEAGIER---FEGFTKA 152 (168)
T ss_dssp TTEEEEEECSSCCBT---TB-CEEEEEEEEEEEECTTS-CEEEEEEEEEEECSSSCCCCH-HHHHHHHHH---HHHHHHH
T ss_pred CCEEEEEEEccCccc---Cc-CceEEEEEEEEEECCCC-ceEEEEEEEEEECCCccCCCH-HHHHHHHHH---HHHHHHH
Confidence 333343334322111 00 23455667889998655 799999999998875 3 210 000 1122 2233456
Q ss_pred HHHHHHhccCC
Q 004783 342 LRELFRAKQGN 352 (730)
Q Consensus 342 LRe~~~~~~~~ 352 (730)
+-+|+-+++..
T Consensus 153 ie~yllanp~~ 163 (168)
T 3rws_A 153 VESFLLANPDY 163 (168)
T ss_dssp HHHHHHHCTTC
T ss_pred HHHHHHhChHh
Confidence 77777776643
No 122
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=75.06 E-value=11 Score=33.85 Aligned_cols=84 Identities=15% Similarity=0.130 Sum_probs=48.2
Q ss_pred cceeEEEeeeccccccccceeeEEEecceeeecccCCCCCCCCCceeEE---eecceE--Eec-----cccceecc----
Q 004783 12 MEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAI---IDSCIR--VTD-----NGRESIHR---- 77 (730)
Q Consensus 12 ~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~~~~P~~~~i---i~~~~~--v~~-----~g~~~~h~---- 77 (730)
+||=|..+-. -.+...+++||+|=.-.|=|=++++... .+.+--. +++-.+ +.| |++++..+
T Consensus 10 ~eG~l~el~~--~~~k~~~~v~~FLfND~Ll~a~~~~~~~--~~~~~~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~~s~ 85 (113)
T 1zc3_B 10 YNGDLVEYEA--DHMAQLQRVHGFLMNDCLLVATWLPQRR--GMYRYNALYPLDRLAVVNVKDNPPMKDMFKLLMFPESR 85 (113)
T ss_dssp EEEEEEEEET--TTCCEEEEEEEEEESSEEEEEEEECCTT--SCEEEEEEEETTTCEEEEECCBTTBSSEEEEEETTEEE
T ss_pred EeCcEEEEcc--ccCCCCccEEEEecCCEEEEEEEeccCc--ccEEEEEEEEcccCEEEECCCCcccceEEEEEeCCceE
Confidence 6776666533 2333347776666555555555444321 1121111 122111 233 34665544
Q ss_pred cccCCCHHHHHHHHHHHHHHHH
Q 004783 78 KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 78 ~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
.+.|.+++|-.+|+.+|++|++
T Consensus 86 ~~~aes~~eK~~Wl~~~~~a~~ 107 (113)
T 1zc3_B 86 IFQAENAKIKREWLEVLEETKR 107 (113)
T ss_dssp EEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHHHHH
Confidence 7899999999999999999986
No 123
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=74.40 E-value=58 Score=30.64 Aligned_cols=147 Identities=10% Similarity=-0.020 Sum_probs=81.8
Q ss_pred EEEEEEecCcHHHHHHHH-HhCCCCccccccc-cceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCC
Q 004783 188 IMAVGVVDGTSEAIFQTL-MSLGASRSVWDFC-FYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDG 265 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL-~d~d~~R~eWD~~-~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dG 265 (730)
+-.+..+.+||++||+++ .|.+...++|-+. ++.++++|-=.+.-.|-+..+.+. . +. + ++.-|.-..++++
T Consensus 5 ~~~ei~i~a~a~kvw~~~~~d~~~l~pk~~P~~i~s~e~~eGdgg~Gsir~~~~~~g-~--~~--~-~~kErl~~iD~~~ 78 (159)
T 4a8u_A 5 YETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEG-F--PF--K-YVKDRVDEVDHTN 78 (159)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECSSSTTCEEEEECCTT-S--SC--S-EEEEEEEEEETTT
T ss_pred EEEEEEecCCHHHHHHHHhcCccccchhhCchhccEEEEEcCCCCCceEEEEEEecC-C--Cc--c-EEEEEEEEEcccc
Confidence 445567899999999999 7877336899985 677888874222234666666431 1 11 1 4444444343333
Q ss_pred cEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCC-Ccccccccc--hhhHHHHHHHHHHHH
Q 004783 266 TYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKC-WRSYLQPSS--ARSITIRMLGRVAAL 342 (730)
Q Consensus 266 syvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkG-wip~~~~~~--~~~i~~~mL~~va~L 342 (730)
..+.++=++-+..| .+ .......+.+.|.+++ .|.|+|....+++| ..|.= ... ...... ..+..+
T Consensus 79 -~~~~y~iiegd~l~--~~---~~~y~~ti~v~p~~~g-gs~v~wt~~y~~~~~~~~~~-~~~k~~~~~~~---~~~k~i 147 (159)
T 4a8u_A 79 -FKYSYSVIEGGPVG--DT---LEKISNEIKIVATPNG-GSILKINNKYHTKGDHEVKA-EQIKASKEMGE---TLLRAV 147 (159)
T ss_dssp -TEEEEEEEEETTCB--TT---EEEEEEEEEEEECTTS-CEEEEEEEEEEESSSCCC-C-HHHHHHHHHHH---HHHHHH
T ss_pred -CEEEEEEeeCCCCc--cc---eEEEEEEEEEEECCCC-ceEEEEEEEEEECCCCcCCH-HHHHHHHHHHH---HHHHHH
Confidence 22222222211111 11 2345567889997655 79999999999875 44421 001 112222 334566
Q ss_pred HHHHHhccC
Q 004783 343 RELFRAKQG 351 (730)
Q Consensus 343 Re~~~~~~~ 351 (730)
-.|+-+++.
T Consensus 148 e~yll~np~ 156 (159)
T 4a8u_A 148 ESYLLAHSD 156 (159)
T ss_dssp HHHHHHCTT
T ss_pred HHHHhhChh
Confidence 677776654
No 124
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=74.32 E-value=4.5 Score=41.98 Aligned_cols=71 Identities=25% Similarity=0.223 Sum_probs=45.7
Q ss_pred ceeeEEEecceeeecccCCCCCCC--CCceeEE-eecceEEec------cccceecc---------cccCCCHHHHHHHH
Q 004783 30 RKRYFLLEDHFLKSFKSVPHSKNE--DPVRSAI-IDSCIRVTD------NGRESIHR---------KLGASSPEEAAKWI 91 (730)
Q Consensus 30 ~~Ryfvl~g~~l~~yk~~p~~~~~--~P~~~~i-i~~~~~v~~------~g~~~~h~---------~~~a~~~e~a~~W~ 91 (730)
+.||++|=...|=+=|++...... -=.+..| +. .+.|+| +.|++.+| .|.|.|++|..+|+
T Consensus 222 ~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~-~~~v~e~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~ 300 (311)
T 1nty_A 222 RERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTS-ELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWI 300 (311)
T ss_dssp EEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGG-GEEEECCCTTCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHH
T ss_pred ceeEEEeccCeEEEEEeeccCCCCceeEEeeeeecc-ceeeEEccCCCCceEEEEeCCCCCCCceEEEECCCHHHHHHHH
Confidence 789999988888777765432111 0111111 22 233432 24666442 68999999999999
Q ss_pred HHHHHHHHhC
Q 004783 92 HSLQEAALKG 101 (730)
Q Consensus 92 ~a~~~a~~~~ 101 (730)
++|+.|+++.
T Consensus 301 ~~i~~~i~e~ 310 (311)
T 1nty_A 301 KHIREVIQER 310 (311)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhhh
Confidence 9999999863
No 125
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=71.61 E-value=32 Score=32.56 Aligned_cols=144 Identities=10% Similarity=-0.046 Sum_probs=79.7
Q ss_pred eEEEEEEecCcHHHHHHHHH-hCCCCcccccc-ccceeEEEEee-cCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcC
Q 004783 187 AIMAVGVVDGTSEAIFQTLM-SLGASRSVWDF-CFYRGCVVEHL-DGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRED 263 (730)
Q Consensus 187 ~~KavgvVdAspe~VfevL~-d~d~~R~eWD~-~~~e~~VVE~i-D~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~ 263 (730)
.+.....|+|||++||+++. +.. ..++|-+ .+..++++|-= ++.-.|.+..+... .+ --++.-|.-.. +
T Consensus 18 k~~~ev~i~apa~kvw~~~~~d~~-~lpk~~P~~i~s~~~~eGd~gg~Gsir~~~~~~g-g~-----~~~~kErl~~i-D 89 (166)
T 2i9y_A 18 KLETDVEIKASADKFHHMFAGKPH-HVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHD-GE-----AKVAKERIEAV-E 89 (166)
T ss_dssp EEEEEEEESSCHHHHHGGGSSCSS-CCCCSCSSCCSSCCCCSCCSCSTTCCCEEEEEET-TE-----EEEEEEEEEEE-E
T ss_pred EEEEEEEecCCHHHHHHHHhcccc-cccccccccceEEEEEcCCCCCCCeEEEEEEecC-CC-----ceEEEEEEEEE-e
Confidence 35566778999999999965 555 6899999 88888888642 12223444444221 00 01222222222 3
Q ss_pred CCcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCC-CcccccccchhhHHHHHHHHHHHH
Q 004783 264 DGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKC-WRSYLQPSSARSITIRMLGRVAAL 342 (730)
Q Consensus 264 dGsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkG-wip~~~~~~~~~i~~~mL~~va~L 342 (730)
+....+.++-++-+. ..+| ....+.|.+.|..++..|.|+|.+..+.++ ..+.- ..+ ... +......|
T Consensus 90 ~~~~~~~y~iieGd~---~~~~---~~~~~ti~v~p~~~g~gs~v~wt~~ye~~~~~~~~p-~~~-~~~---~~~~~k~i 158 (166)
T 2i9y_A 90 PDKNLITFRVIEGDL---MKEY---KSFLLTIQVTPKPGGPGSIVHWHLEYEKISEEVAHP-ETL-LQF---CVEVSKEI 158 (166)
T ss_dssp TTTTEEEEEECCTTG---GGTE---EEEEEEEEEEEEEETTEEEEEEEEEEEESSTTTCCT-HHH-HHH---HHHHHHHH
T ss_pred ccCcEEEEEEEeCCC---CCCe---eEEEEEEEEEECCCCCCcEEEEEEEEEECCCCCCCH-HHH-HHH---HHHHHHHH
Confidence 334445555554321 1222 345678889997433479999999998654 44321 111 122 22334567
Q ss_pred HHHHHhc
Q 004783 343 RELFRAK 349 (730)
Q Consensus 343 Re~~~~~ 349 (730)
.+|+-++
T Consensus 159 e~~l~~~ 165 (166)
T 2i9y_A 159 DEHLLAE 165 (166)
T ss_dssp HHHHHSC
T ss_pred HHHHhhC
Confidence 7776553
No 126
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=71.25 E-value=4.7 Score=43.06 Aligned_cols=23 Identities=22% Similarity=0.270 Sum_probs=21.8
Q ss_pred cccCCCHHHHHHHHHHHHHHHHh
Q 004783 78 KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 78 ~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|.|.|++|-.+|+++|+.|+++
T Consensus 348 ~l~a~s~~ek~~W~~~i~~~i~~ 370 (385)
T 1txd_A 348 ELVAQTVSEKTVWQDLICRMAAS 370 (385)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999985
No 127
>1z94_A Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI structure initiative; 2.10A {Chromobacterium violaceum} SCOP: d.129.3.5
Probab=70.76 E-value=55 Score=28.79 Aligned_cols=30 Identities=13% Similarity=0.246 Sum_probs=25.7
Q ss_pred eEEEEEEecCcHHHHHHHHHhCCCCcccccc
Q 004783 187 AIMAVGVVDGTSEAIFQTLMSLGASRSVWDF 217 (730)
Q Consensus 187 ~~KavgvVdAspe~VfevL~d~d~~R~eWD~ 217 (730)
.+...-.|+|||++||++|.|.+ ...+|..
T Consensus 4 ~~~~~~~i~ap~e~Vw~altd~~-~~~~W~~ 33 (147)
T 1z94_A 4 TIRLHRVLSAPPERVYRAFLDPL-ALAKWLP 33 (147)
T ss_dssp CEEEEEEESSCHHHHHHHTTCHH-HHHHHSS
T ss_pred EEEEEEEeCCCHHHHHHHhCCHH-HHhhccC
Confidence 46667789999999999999988 6889975
No 128
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=69.72 E-value=47 Score=33.17 Aligned_cols=133 Identities=9% Similarity=0.037 Sum_probs=73.7
Q ss_pred EEecCcHHHHHHHHHhCCCCccccccccceeEEEEeec-CceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCC-c--E
Q 004783 192 GVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLD-GHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDG-T--Y 267 (730)
Q Consensus 192 gvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD-~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dG-s--y 267 (730)
..|+||+++|++++.|.+ .-..|-+.+..+++++--+ +--.|-+..+.. -+| . ..+.-|.-..++.. + |
T Consensus 56 ~~I~ApadkVW~lv~dF~-~l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~~-G~p--~---~~vkErL~~lDd~~~~~sY 128 (211)
T 3k3k_A 56 QRIHAPPELVWSIVRRFD-KPQTYKHFIKSCSVEQNFEMRVGCTRDVIVIS-GLP--A---NTSTERLDILDDERRVTGF 128 (211)
T ss_dssp EEESSCHHHHHHHHTCTT-CGGGTCSSEEEEECCTTCCCCTTCEEEEEESS-SSS--C---EEEEEEEEEEETTTTEEEE
T ss_pred EEEcCCHHHHHHHHhCcC-ChhHcCccceEEEEecCCCCCCCcEEEEEecC-CCc--c---ceEEEEEEEEeccCCEEEE
Confidence 468999999999999988 5789999888777664211 112355555532 122 1 23333433333333 2 4
Q ss_pred EEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeee------CCCCcccccccchhhHHHHHHHHHHH
Q 004783 268 VILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAID------WKCWRSYLQPSSARSITIRMLGRVAA 341 (730)
Q Consensus 268 vI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvD------pkGwip~~~~~~~~~i~~~mL~~va~ 341 (730)
.|..- .. +.+.| .+.+.+.|.+++. |+|....+ |.|+...-...+...+. -..+++
T Consensus 129 sIieg-----~l-pv~~Y------~sti~V~p~~~gg---V~Wt~~fes~~~D~P~g~~~e~a~~~v~~iy---~~gL~~ 190 (211)
T 3k3k_A 129 SIIGG-----EH-RLTNY------KSVTTVHRFEKEN---RIWTVVLESYVVDMPEGNSEDDTRMFADTVV---KLNLQK 190 (211)
T ss_dssp EEEEE-----TT-GGGTC------EEEEEEEEEEETT---EEEEEEEEEEEEECCSSSSSSCCHHHHHHHH---HHHHHH
T ss_pred EEeec-----Cc-ceeEE------EEEEEEEECCCCC---EEEEEEEEEecCCCCCCCCHHHHHHHHHHHH---HHHHHH
Confidence 44321 12 23444 3667788885542 88877776 56665422222322222 234567
Q ss_pred HHHHHHhc
Q 004783 342 LRELFRAK 349 (730)
Q Consensus 342 LRe~~~~~ 349 (730)
|++.+++.
T Consensus 191 L~~~~e~~ 198 (211)
T 3k3k_A 191 LATVAEAM 198 (211)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77776654
No 129
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=67.97 E-value=62 Score=28.27 Aligned_cols=30 Identities=10% Similarity=0.120 Sum_probs=26.4
Q ss_pred ceEEEEEEecCcHHHHHHHHHhCCCCccccc
Q 004783 186 PAIMAVGVVDGTSEAIFQTLMSLGASRSVWD 216 (730)
Q Consensus 186 ~~~KavgvVdAspe~VfevL~d~d~~R~eWD 216 (730)
..+.....|+|||+.||++|.|.+ ...+|-
T Consensus 5 ~~i~~~~~i~ap~e~Vw~~ltd~~-~~~~W~ 34 (146)
T 2leq_A 5 LIAQVKTVINAPIEKVWEALVNPE-IIKEYM 34 (146)
T ss_dssp EEEEEEEEECSCHHHHHHHHSCTT-HHHHHS
T ss_pred ceEEEEEEECCCHHHHHHHHcCHH-HhceeE
Confidence 467788899999999999999998 688994
No 130
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=67.16 E-value=2.4 Score=42.94 Aligned_cols=112 Identities=15% Similarity=0.095 Sum_probs=57.3
Q ss_pred EEecCcHHHHHHHHHhCCCCccccccccceeEEEEeec-CceEEEEEEEcCCCCC-CCCCCceEEEEEEEEEcCCCcEEE
Q 004783 192 GVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLD-GHTDIIHKQLYSDWLP-WGMKRRDLLLRRYWRREDDGTYVI 269 (730)
Q Consensus 192 gvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE~iD-~~tdIvY~~~~~~~lP-~pvs~RDFV~lR~wrr~~dGsyvI 269 (730)
.+|+|||++|++++.|.+ .-+.|-+.+..+++++--. +--.|-+..+.. -.| +.++-| .... ++..+.+
T Consensus 84 ~~I~ApadkVW~lv~Df~-~pk~w~p~I~s~el~eGdg~gvGSVR~lt~~~-G~p~~~vkEr------Le~i-Dde~~~~ 154 (223)
T 3qrz_A 84 QMIHAPPESVWALVRRFD-NPKVYKNFIRQCRIVQGDGLHVGDLREVMVVS-GLPAVSSTER------LEIL-DEERHVI 154 (223)
T ss_dssp CCCSSCHHHHHHHHHCCS-SGGGTCSSCCCCCCCC---CCSSCCCCCCC----CCCCCCCCC------CSEE-ETTTTEE
T ss_pred EEEcCCHHHHHHHHhCCC-ChhHcchhcCEEEEEcCCCCCCCeEEEEEecC-CCccceEEEE------EEEE-eccCCEE
Confidence 358999999999999998 5778999999888775211 111232222221 111 111111 1111 2333444
Q ss_pred EEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeee-CCCCcc
Q 004783 270 LYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAID-WKCWRS 321 (730)
Q Consensus 270 ~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvD-pkGwip 321 (730)
.+.=++- .. +.. .+.+-+.+.|.+++ .|.|+|....| |.|+..
T Consensus 155 sYsIieG-~~-p~~------~Y~stikV~p~~dG-GT~V~Ws~~f~pp~g~~~ 198 (223)
T 3qrz_A 155 SFSVVGG-DH-RLK------NYRSVTTLHASDDE-GTVVVESYIVDVPPGNTE 198 (223)
T ss_dssp ECCCTTC-SS-SCC------CCCCEEEC---------CCEEEEEECSCSSSCS
T ss_pred EEEEEeC-CC-ccc------cEEEEEEEEEcCCC-CEEEEEEEEEEcCCCCCH
Confidence 4443432 12 222 23344678887554 79999999999 677754
No 131
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=64.52 E-value=7.6 Score=46.05 Aligned_cols=87 Identities=18% Similarity=0.225 Sum_probs=51.7
Q ss_pred cccceeEEEeeeccccccccceeeEEEecceeeecccCCCCC--CCCCc---eeEEeecceEEeccccceecc-------
Q 004783 10 GRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSK--NEDPV---RSAIIDSCIRVTDNGRESIHR------- 77 (730)
Q Consensus 10 ~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~--~~~P~---~~~ii~~~~~v~~~g~~~~h~------- 77 (730)
+...|||-....+ +.+-=++.=||||.--.|..||.+.... -+.|+ |..-++..-+-..+.+.+||.
T Consensus 540 ~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (772)
T 3zvr_A 540 VIRKGWLTINNIG-IMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYK 618 (772)
T ss_dssp EEEEEEEEESSSC-CC---CCEEEEEEESSEEEEESSTTCCCEEEEEECTTEEEEEC-------CEEEEEEETTSSCSBT
T ss_pred ceeeeeeeecccc-cccCCCccceeeccccccccccchhhhcccccccccccccchhhhccccccccccccCCccccccc
Confidence 6678999875543 2111237889999999999999754311 12222 211111111111122334444
Q ss_pred -----cccCCCHHHHHHHHHHHHHH
Q 004783 78 -----KLGASSPEEAAKWIHSLQEA 97 (730)
Q Consensus 78 -----~~~a~~~e~a~~W~~a~~~a 97 (730)
+|+|.|+|+...|+.+|=.|
T Consensus 619 ~~~~~~l~~~~~~~~~~~~~~~~~~ 643 (772)
T 3zvr_A 619 DYRQLELACETQEEVDSWKASFLRA 643 (772)
T ss_dssp TBSEEEEEESSHHHHHHHHHHHHHT
T ss_pred hhhhhhhhccccccchhhHHhhhhc
Confidence 89999999999999999777
No 132
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=63.58 E-value=47 Score=32.67 Aligned_cols=138 Identities=12% Similarity=0.056 Sum_probs=74.0
Q ss_pred EEEecCcHHHHHHHHHhCCCCccccccccceeEEEE-eecCc-----eEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCC
Q 004783 191 VGVVDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVE-HLDGH-----TDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDD 264 (730)
Q Consensus 191 vgvVdAspe~VfevL~d~d~~R~eWD~~~~e~~VVE-~iD~~-----tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~d 264 (730)
...|+||+++|+.++.|.+ .-+.|-+.+..+++++ - |+. -.|-+..+.. -+|. ..+.-|--..++.
T Consensus 35 ~~~I~Ap~d~VWalVrdF~-~p~~w~p~V~s~~~~e~G-dg~~~~~vGsVR~ltl~~-G~P~-----~~i~ErL~~lDde 106 (189)
T 3oji_A 35 AHRVDAPAHAIWRFVRDFA-NPNKYKHFIKSCTIRVNG-NGIKEIKVGTIREVSVVS-GLPA-----STSVEILEVLDEE 106 (189)
T ss_dssp EEEESSCHHHHHHHHSCTT-CGGGTCTTEEEEEECCC-----CCCSTTCEEEEEECS-SSSB-----SEEEEEEEEEETT
T ss_pred EEEEcCCHHHHHHHHhCCC-ChhhCccccceEEEEecC-CCCccCCCCcEEEEEecC-CCcC-----ceEEEEEEEEecc
Confidence 3468999999999999998 6789999999998875 2 221 1344444432 2221 2333333333333
Q ss_pred CcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCC---CC----CeeEEEEEEeee-CCCCcccccccchhhHHHHHH
Q 004783 265 GTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMN---HG----KKSVVKHMLAID-WKCWRSYLQPSSARSITIRML 336 (730)
Q Consensus 265 GsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~---~g----~~t~VTyi~qvD-pkGwip~~~~~~~~~i~~~mL 336 (730)
. ..+.++=++ ... +..+ +.+.-.+.|.. ++ +.|.|.+-...| |-|+.---...+...+. -
T Consensus 107 ~-~~~sY~Iie-g~~-pv~n------Y~StitV~~~~~~~~G~~~~~~T~v~es~~~D~P~g~t~e~~~~~v~~v~---~ 174 (189)
T 3oji_A 107 K-RILSFRVLG-GEH-RLNN------YRSVTSVNEFVVLEKDKKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVV---K 174 (189)
T ss_dssp T-TEEEEEEEE-CSB-SSCS------CEEEEEEEEEEEECTTSCEEEEEEEEEEEEEECCTTSCHHHHHHHHHHHH---H
T ss_pred C-CEEEEEEEe-cCC-cccc------EEEEEEEEeccccCCCccccCcEEEEEeEecCCCCCCCHHHHHHHHHHHH---H
Confidence 2 222222221 111 2333 33444566652 23 579999999999 67776532222322222 2
Q ss_pred HHHHHHHHHHHh
Q 004783 337 GRVAALRELFRA 348 (730)
Q Consensus 337 ~~va~LRe~~~~ 348 (730)
..+.+|++..++
T Consensus 175 ~gL~~L~~~~e~ 186 (189)
T 3oji_A 175 SNLQNLAVISTA 186 (189)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhc
Confidence 345566655553
No 133
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=62.89 E-value=6.2 Score=41.42 Aligned_cols=70 Identities=19% Similarity=0.288 Sum_probs=44.4
Q ss_pred ceeeEEEecceeeecccCCCC--------CCCCCceeEEeecc----eEE-------------eccccceec---c----
Q 004783 30 RKRYFLLEDHFLKSFKSVPHS--------KNEDPVRSAIIDSC----IRV-------------TDNGRESIH---R---- 77 (730)
Q Consensus 30 ~~Ryfvl~g~~l~~yk~~p~~--------~~~~P~~~~ii~~~----~~v-------------~~~g~~~~h---~---- 77 (730)
+.||++|=.+.|=+-|++... ....|+..+.|... .++ ..++|++.| +
T Consensus 244 ~~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~~~~~~ 323 (346)
T 2z0q_A 244 VKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNGSQSQT 323 (346)
T ss_dssp CEEEEEEESSEEEEEEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCGGGCEE
T ss_pred cEEEEEECCCcEEEEEEeccCCceeeeeecCCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecCCCCce
Confidence 688999888888777654321 11234433332211 110 123577654 1
Q ss_pred -cccCCCHHHHHHHHHHHHHHHH
Q 004783 78 -KLGASSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 78 -~~~a~~~e~a~~W~~a~~~a~~ 99 (730)
.|.|.|++|-..|+++|+.|++
T Consensus 324 ~~l~a~s~~ek~~W~~~i~~aie 346 (346)
T 2z0q_A 324 HSLQANDTFNKQQWLNCIRQAKE 346 (346)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHC
T ss_pred EEEEECCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999974
No 134
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=62.26 E-value=46 Score=31.27 Aligned_cols=119 Identities=11% Similarity=-0.064 Sum_probs=69.1
Q ss_pred eEEEEEEecCcHHHHHHH-HHhCCCCccccccc-cceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCC
Q 004783 187 AIMAVGVVDGTSEAIFQT-LMSLGASRSVWDFC-FYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDD 264 (730)
Q Consensus 187 ~~KavgvVdAspe~Vfev-L~d~d~~R~eWD~~-~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~d 264 (730)
.+-.+..+.+||++||++ +.|.+..+++|-+. ++.+++ |-=++.-.|.+..+... . +. -++--|.-..+++
T Consensus 5 ~~~~ei~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~-eGdg~~Gsir~~~~~~g-~--~~---~~~kErl~~iD~~ 77 (154)
T 2vjg_A 5 SHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDGGAGTVRIITLPEG-S--PI---TTMTVRTDAVNKE 77 (154)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSSSTTCEEEEECCTT-C--SC---CEEEEEEEEEETT
T ss_pred EEEEEEEecCCHHHHHHhhhCCccccchhhccCceeEEEE-eCCCCCceEEEEEecCC-C--Cc---eEEEEEEEEEecc
Confidence 345566789999999998 88877434899985 677777 63222234666665331 1 11 2333343333333
Q ss_pred CcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCC
Q 004783 265 GTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCW 319 (730)
Q Consensus 265 GsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGw 319 (730)
+ ..+.++=++-+..|. + .......+.+.|.+++ .|.|+|....+++|=
T Consensus 78 ~-~~~~y~iiegd~l~~--~---~~~~~~ti~v~p~~~g-gs~v~wt~~y~~~~~ 125 (154)
T 2vjg_A 78 A-LSYDSTVIDGDILLG--F---IESIETHMVVVPTADG-GSITKTTAIFHTKGD 125 (154)
T ss_dssp T-TEEEEEEEESGGGTT--T---EEEEEEEEEEEECTTS-CEEEEEEEEEEESTT
T ss_pred C-CEEEEEEEecCCCcc--c---eEEEEEEEEEEECCCC-cEEEEEEEEEEECCC
Confidence 3 222222232211111 1 2344567788998655 699999999998764
No 135
>2lcg_A Uncharacterized protein; start domain, structural genomics, northeast structural GENO consortium, NESG, unknown function, AHSA1; NMR {Ralstonia metallidurans}
Probab=56.33 E-value=1.1e+02 Score=27.19 Aligned_cols=27 Identities=11% Similarity=0.242 Sum_probs=23.8
Q ss_pred EEEEEEecCcHHHHHHHHHhCCCCcccc
Q 004783 188 IMAVGVVDGTSEAIFQTLMSLGASRSVW 215 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~d~d~~R~eW 215 (730)
+.....|+|||+.||++|.|.+ ...+|
T Consensus 3 i~~~~~i~ap~e~Vw~altd~~-~~~~W 29 (142)
T 2lcg_A 3 ITVETTVAAPVGKVWRAYTTPE-DIKQW 29 (142)
T ss_dssp EEEEEEESSCHHHHHHHTTCHH-HHHHH
T ss_pred EEEEEEeCCCHHHHHHHhCCHH-HHhcC
Confidence 5667789999999999999988 68888
No 136
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=56.04 E-value=9.9 Score=46.53 Aligned_cols=83 Identities=23% Similarity=0.280 Sum_probs=53.3
Q ss_pred ccceeEEEeeeccccccccceeeEEEecceeeecccCCCCC-------CCCCce-eEEeecceE--Eec-----ccccee
Q 004783 11 RMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSK-------NEDPVR-SAIIDSCIR--VTD-----NGRESI 75 (730)
Q Consensus 11 ~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~-------~~~P~~-~~ii~~~~~--v~~-----~g~~~~ 75 (730)
.++|.|.+.+.. +.||++|=...|=+-|++.... ..--++ .+-++.... ++| +++++.
T Consensus 445 i~eG~l~~~~~k-------~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~~~~~~~F~I~ 517 (1049)
T 3ksy_A 445 IMEGTLTRVGAK-------HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEII 517 (1049)
T ss_dssp CCEEEEEETTCS-------SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSSSCCSEEEEC
T ss_pred EEeceEEEEccC-------ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCCccccceEEEE
Confidence 388888876632 7899999999888877763210 011111 111333222 111 346665
Q ss_pred cc-----cccCCCHHHHHHHHHHHHHHHHh
Q 004783 76 HR-----KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 76 h~-----~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
|. .|.|.|.+|..+||++|+.+..+
T Consensus 518 ~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~k 547 (1049)
T 3ksy_A 518 LKDENSVIFSAKSAEEKNNWMAALISLQYR 547 (1049)
T ss_dssp CTTSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 55 79999999999999999988653
No 137
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=50.52 E-value=7.7 Score=41.11 Aligned_cols=72 Identities=14% Similarity=0.240 Sum_probs=44.5
Q ss_pred cceeeEEEecceeeecccCCCC-----CCCCCceeEE-eecceEEec------cccceec-----c----cccCCCHHHH
Q 004783 29 SRKRYFLLEDHFLKSFKSVPHS-----KNEDPVRSAI-IDSCIRVTD------NGRESIH-----R----KLGASSPEEA 87 (730)
Q Consensus 29 ~~~Ryfvl~g~~l~~yk~~p~~-----~~~~P~~~~i-i~~~~~v~~------~g~~~~h-----~----~~~a~~~e~a 87 (730)
.+.||++|=...|=+=|.+... ...-=.+..| +. ++.|++ ++|++.+ + .|-|.|+++.
T Consensus 228 ~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~-~~~v~~~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek 306 (354)
T 2rgn_B 228 GRERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVS-CLGLEGNLQGDPCRFALTSRGPEGGIQRYVLQAADPAIS 306 (354)
T ss_dssp CCEEEEEEESSEEEEEEECC--------CCEEEEEEEEGG-GEEEEESGGGCTTEEEEEEECSSSCEEEEEEEESSHHHH
T ss_pred CceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeecc-ceeeeeccCCCCceEEEEecCCCCCceEEEEECCCHHHH
Confidence 3779999988888777665421 0000011111 11 223332 3467654 2 7899999999
Q ss_pred HHHHHHHHHHHHhC
Q 004783 88 AKWIHSLQEAALKG 101 (730)
Q Consensus 88 ~~W~~a~~~a~~~~ 101 (730)
..|+++|.+|++++
T Consensus 307 ~~W~~~i~~ai~~~ 320 (354)
T 2rgn_B 307 QAWIKHVAQILESQ 320 (354)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999853
No 138
>2nn5_A Hypothetical protein EF_2215; structural genomics, APC29336, PSI-2, structure initiative; HET: MSE; 1.45A {Enterococcus faecalis} SCOP: d.129.3.5
Probab=46.37 E-value=2e+02 Score=27.30 Aligned_cols=31 Identities=10% Similarity=0.118 Sum_probs=27.2
Q ss_pred ceEEEEEEecCcHHHHHHHHHhCCCCcccccc
Q 004783 186 PAIMAVGVVDGTSEAIFQTLMSLGASRSVWDF 217 (730)
Q Consensus 186 ~~~KavgvVdAspe~VfevL~d~d~~R~eWD~ 217 (730)
..+.....|+|||+.||++|.|.+ ...+|-.
T Consensus 36 ~~i~~~~~i~Ap~e~VW~altdp~-~l~~W~~ 66 (184)
T 2nn5_A 36 IYFGTERAISASPQTIWRYLTETD-KLKQWFP 66 (184)
T ss_dssp EEEEEEEEESSCHHHHHHHHHCHH-HHHHHCT
T ss_pred cEEEEEEEeCCCHHHHHHHHcCHH-HHHHhCC
Confidence 567888899999999999999988 6889955
No 139
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=45.69 E-value=1.9e+02 Score=28.37 Aligned_cols=147 Identities=10% Similarity=0.031 Sum_probs=79.7
Q ss_pred eEEEEEEecCcHHHHHHHH-H-hCCCCcccccccc-ceeEEEEeecC-ceEEEEEEEcCCCCCCCCCCceEEEEEEEEEc
Q 004783 187 AIMAVGVVDGTSEAIFQTL-M-SLGASRSVWDFCF-YRGCVVEHLDG-HTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRE 262 (730)
Q Consensus 187 ~~KavgvVdAspe~VfevL-~-d~d~~R~eWD~~~-~e~~VVE~iD~-~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~ 262 (730)
.+..+..|+|||++||+++ . |.+...++|-+.+ +.++++ - |+ .-.|-...+.. + .+--++.-|....+
T Consensus 30 ~~~~eveI~apa~kvW~~~v~~df~~l~pk~~P~~i~s~e~~-G-dGg~GsIR~lt~~~----G--~~~~~vkErle~iD 101 (201)
T 2vq5_A 30 VIHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEII-G-DGGVGTILDMTFVP----G--EFPHEYKEKFILVD 101 (201)
T ss_dssp EEEEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEE-S-SSSTTCEEEEECCT----T--CSSCEEEEEEEEEE
T ss_pred EEEEEEEecCCHHHHHhhhhcCCcccchhhhCcccceEEEEe-c-CCCCCeEEEEEecC----C--CcccEEEEEEEEEc
Confidence 3445567899999999995 4 7773337999865 556766 3 32 22355555422 1 11135555555454
Q ss_pred CCCcEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCCCc-ccccccchhhHHHHHHHHHHH
Q 004783 263 DDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKCWR-SYLQPSSARSITIRMLGRVAA 341 (730)
Q Consensus 263 ~dGsyvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkGwi-p~~~~~~~~~i~~~mL~~va~ 341 (730)
++. ..+.++=++-+-.. .+ .+...+...+.|.+++ .|.|+|....++++-. +---....... +......
T Consensus 102 de~-~~~sYsiieGd~l~--~~---~~~y~~tikv~p~~dg-gs~vkWt~~ye~~~~~~~~~e~~~~~~~---~~~~~Ka 171 (201)
T 2vq5_A 102 NEH-RLKKVQMIEGGYLD--LG---VTYYMDTIHVVPTGKD-SCVIKSSTEYHVKPEFVKIVEPLITTGP---LAAMADA 171 (201)
T ss_dssp TTT-TEEEEEEEEEGGGG--TT---EEEEEEEEEEEEEETT-EEEEEEEEEEEECGGGHHHHTTTCCSHH---HHHHHHH
T ss_pred hhh-CEEEEEEEecCccc--cc---eeEEEEEEEEEECCCC-CeEEEEEEEEEECCCCCCCChhHHHHHH---HHHHHHH
Confidence 333 23333222211110 01 1233455667787554 7999999999987644 10000111222 2233467
Q ss_pred HHHHHHhccC
Q 004783 342 LRELFRAKQG 351 (730)
Q Consensus 342 LRe~~~~~~~ 351 (730)
+.+|+-+++.
T Consensus 172 iE~yLlanp~ 181 (201)
T 2vq5_A 172 ISKLVLEHKS 181 (201)
T ss_dssp HHHHHHSCCC
T ss_pred HHHHHHhCcc
Confidence 8888887763
No 140
>2lf2_A Uncharacterized protein; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; NMR {Cytophaga hutchinsonii}
Probab=40.12 E-value=2.3e+02 Score=26.20 Aligned_cols=31 Identities=6% Similarity=0.117 Sum_probs=27.4
Q ss_pred CceEEEEEEecCcHHHHHHHHHhCCCCccccc
Q 004783 185 HPAIMAVGVVDGTSEAIFQTLMSLGASRSVWD 216 (730)
Q Consensus 185 ~~~~KavgvVdAspe~VfevL~d~d~~R~eWD 216 (730)
...+..+..|+|||+.||+++.|.+ ...+|-
T Consensus 15 ~~~i~~~~~i~Ap~e~Vw~a~tdpe-~~~~W~ 45 (175)
T 2lf2_A 15 NKTITIKREFAAVRAIVWEAFTRAE-ILDQWW 45 (175)
T ss_dssp TTEEEEEEEESSCHHHHHHHHTCHH-HHHHSS
T ss_pred CceEEEEEEEcCCHHHHHHHhCCHH-HHhhCc
Confidence 3678889999999999999999988 688894
No 141
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=39.45 E-value=2.2e+02 Score=25.94 Aligned_cols=30 Identities=10% Similarity=0.115 Sum_probs=26.6
Q ss_pred ceEEEEEEecCcHHHHHHHHHhCCCCccccc
Q 004783 186 PAIMAVGVVDGTSEAIFQTLMSLGASRSVWD 216 (730)
Q Consensus 186 ~~~KavgvVdAspe~VfevL~d~d~~R~eWD 216 (730)
..+.....|+|||+.||+++.|.+ ...+|-
T Consensus 12 ~~i~~~~~i~Ap~e~Vw~altdp~-~~~~W~ 41 (172)
T 2ldk_A 12 LSFSIVAEFDADVKRVWAIWEDPR-QLERWW 41 (172)
T ss_dssp TEEEEEEEESSCHHHHHHHHHCHH-HHHTTS
T ss_pred ceEEEEEEeCCCHHHHHHHhCCHH-HHHhcc
Confidence 578888999999999999999987 578884
No 142
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=38.72 E-value=26 Score=31.15 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=25.6
Q ss_pred EEEEEEecCcHHHHHHHHHhCCCCccccccc
Q 004783 188 IMAVGVVDGTSEAIFQTLMSLGASRSVWDFC 218 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~d~d~~R~eWD~~ 218 (730)
+.....|+|||++||+.|.|.+ ...+|...
T Consensus 3 i~~~~~i~ap~e~Vw~altd~~-~~~~W~~~ 32 (135)
T 3q6a_A 3 IITKMQVDVPRETVFEAFVDPE-KIGGFWFS 32 (135)
T ss_dssp EEEEEEESSCHHHHHHHHHCTT-TGGGTSSS
T ss_pred EEEEEEeCCCHHHHHHHHcCHH-HhcccCCC
Confidence 4567789999999999999998 68999653
No 143
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=37.43 E-value=2.4e+02 Score=25.78 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=28.2
Q ss_pred ceEEEEEEecCcHHHHHHHHHhCCCCcccccc
Q 004783 186 PAIMAVGVVDGTSEAIFQTLMSLGASRSVWDF 217 (730)
Q Consensus 186 ~~~KavgvVdAspe~VfevL~d~d~~R~eWD~ 217 (730)
..+.....|+|||+.||++|.|.+ ...+|..
T Consensus 13 ~~i~~~~~i~Ap~e~Vw~altdp~-~~~~W~~ 43 (164)
T 3pu2_A 13 TRLEFRRHFAATPEQLWAALTSPA-LLPAWLF 43 (164)
T ss_dssp TEEEEEEEESSCHHHHHHHHHCTT-TGGGTSC
T ss_pred ceEEEEEEECCCHHHHHHHhcCHH-HHhhEeC
Confidence 678889999999999999999998 6889975
No 144
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=36.37 E-value=80 Score=29.52 Aligned_cols=91 Identities=16% Similarity=0.265 Sum_probs=58.9
Q ss_pred ccccceeE-EEeeeccc----cccccceeeEEEec------ceeeecccCCCC-CC--CCCceeEE-eecceEE--eccc
Q 004783 9 QGRMEGWL-HLIRSNRI----GLQYSRKRYFLLED------HFLKSFKSVPHS-KN--EDPVRSAI-IDSCIRV--TDNG 71 (730)
Q Consensus 9 ~~~~eGwl-~~~g~~~~----g~~~~~~Ryfvl~g------~~l~~yk~~p~~-~~--~~P~~~~i-i~~~~~v--~~~g 71 (730)
.+..||=| |..|.+-- +..-|+|+.|||.- -+|.|| ..|++ ++ .+|.-.++ |-.|++. .|+-
T Consensus 17 e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy-~PPkssKpK~~i~cs~I~EVR~tt~LEmPD~~ 95 (136)
T 1v5m_A 17 DIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFF-VPPKASRPKVSIPLSAIIEVRTTMPLEMPEKD 95 (136)
T ss_dssp SCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEE-SSTTSSSCSSCEETTTCCBCCCCCCSSSCCCT
T ss_pred eeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEe-cCCcccCCccccchhhhhhhhhccccccCCcc
Confidence 45589988 77776642 55667899999853 578888 44543 21 22322222 4455554 3321
Q ss_pred ----cceecc---cccCCCHHHHHHHHHHHHHHHHh
Q 004783 72 ----RESIHR---KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 72 ----~~~~h~---~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.|+-++ .|.|.+.+++..|+..|+.....
T Consensus 96 nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~ 131 (136)
T 1v5m_A 96 NTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDS 131 (136)
T ss_dssp TEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 333333 88899999999999999988764
No 145
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=34.96 E-value=77 Score=32.02 Aligned_cols=87 Identities=21% Similarity=0.281 Sum_probs=56.9
Q ss_pred cccccccceeEEEeeeccccccccceeeEEEec--c-----eeeecccCCCC-CCCCCceeEEeecceEEecc-ccc---
Q 004783 6 ITSQGRMEGWLHLIRSNRIGLQYSRKRYFLLED--H-----FLKSFKSVPHS-KNEDPVRSAIIDSCIRVTDN-GRE--- 73 (730)
Q Consensus 6 ~~~~~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g--~-----~l~~yk~~p~~-~~~~P~~~~ii~~~~~v~~~-g~~--- 73 (730)
.|-.+..||-+-. +.+| =++.||.||+= . .|..||.+.+- ++..+--++-++.+|-+|-- ..+
T Consensus 5 ~~~~~v~eg~vk~-r~~K----kWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~~GlE~g~~ldk~s 79 (224)
T 3ml4_A 5 MTEAALVEGQVKL-RDGK----KWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDICGLEPALPYEGLA 79 (224)
T ss_dssp --CCCSEEEEEEE-C-------CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCEEEEEEEEEETTEE
T ss_pred cccceeEEEeeee-ecCC----ceeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHhcCccccccccCcc
Confidence 3555668887644 3433 27999999974 1 56779877753 22344455669999987652 111
Q ss_pred ----eecc----cccCCCHHHHHHHHHHHHHH
Q 004783 74 ----SIHR----KLGASSPEEAAKWIHSLQEA 97 (730)
Q Consensus 74 ----~~h~----~~~a~~~e~a~~W~~a~~~a 97 (730)
|+-. .||+.+.|++..|-..|...
T Consensus 80 ~TlAIIc~d~~~vLAFds~e~l~~W~~~l~~s 111 (224)
T 3ml4_A 80 HTLAIICLSQAVMLGFDSHEAMCAWDTRIRYA 111 (224)
T ss_dssp EEEEEEESSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred cEEEEEecCcEEEEEeCCHHHHHHHHHHHhhc
Confidence 1111 99999999999999999875
No 146
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=34.00 E-value=2.5e+02 Score=24.96 Aligned_cols=29 Identities=14% Similarity=0.122 Sum_probs=25.4
Q ss_pred ceEEEEEEecCcHHHHHHHHHhCCCCcccc
Q 004783 186 PAIMAVGVVDGTSEAIFQTLMSLGASRSVW 215 (730)
Q Consensus 186 ~~~KavgvVdAspe~VfevL~d~d~~R~eW 215 (730)
..+.....|+|||+.||++|.|.+ ...+|
T Consensus 2 ~~i~~~~~i~Ap~e~Vw~altdpe-~~~~W 30 (144)
T 2l8o_A 2 NKITVEVTVYAAIEKVWKYWNEPA-HIMKW 30 (144)
T ss_dssp CSEEEEEEECSCHHHHHHHHHCHH-HHHHH
T ss_pred cEEEEEEEECCCHHHHHHHHCCHH-HHhhc
Confidence 357778889999999999999988 68899
No 147
>3put_A Hypothetical conserved protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.83A {Rhizobium etli cfn 42} PDB: 3otl_A*
Probab=31.21 E-value=3.1e+02 Score=25.14 Aligned_cols=31 Identities=10% Similarity=0.190 Sum_probs=26.8
Q ss_pred ceEEEEEEecCcHHHHHHHHHhCCCCcccccc
Q 004783 186 PAIMAVGVVDGTSEAIFQTLMSLGASRSVWDF 217 (730)
Q Consensus 186 ~~~KavgvVdAspe~VfevL~d~d~~R~eWD~ 217 (730)
..+...-.|+||++.||+.+.|.+ ...+|..
T Consensus 9 ~~i~~~r~i~Ap~e~Vw~a~Tdpe-~l~~W~~ 39 (166)
T 3put_A 9 TTFVIERRLTAPVARVFRAWSTPE-SKRQWFA 39 (166)
T ss_dssp EEEEEEEEESSCHHHHHHHHHCHH-HHHHHHT
T ss_pred ceEEEEEEECCCHHHHHHHhCCHH-HHHhcCC
Confidence 467788889999999999999988 6889964
No 148
>2lgh_A Uncharacterized protein; AHSA1, start domain, COG3832, PF08327, HSP90, heat shock, ST genomics, PSI-biology; NMR {Aeromonas hydrophila subsp}
Probab=30.46 E-value=2.9e+02 Score=24.55 Aligned_cols=27 Identities=15% Similarity=0.228 Sum_probs=23.8
Q ss_pred EEEEEEecCcHHHHHHHHHhCCCCcccc
Q 004783 188 IMAVGVVDGTSEAIFQTLMSLGASRSVW 215 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL~d~d~~R~eW 215 (730)
+.....|+|||+.||+++.|.+ ...+|
T Consensus 3 i~~~~~i~Ap~e~Vw~altdp~-~~~~W 29 (144)
T 2lgh_A 3 ISIEAHIEQEIEAVWWAWNDPD-CIARW 29 (144)
T ss_dssp EEEEEEESSCHHHHHHHHHCHH-HHTTS
T ss_pred EEEEEEeCCCHHHHHHHhCCHH-HHhcc
Confidence 5667789999999999999988 68899
No 149
>2rr3_B OSBP, oxysterol-binding protein 1; lipid transport, transport, protein-peptide complex, major S protein domain, protein binding; NMR {Homo sapiens}
Probab=30.19 E-value=22 Score=26.96 Aligned_cols=12 Identities=58% Similarity=1.140 Sum_probs=9.3
Q ss_pred CcccccccCCCC
Q 004783 408 NDAADEFFDVPE 419 (730)
Q Consensus 408 ~~~~de~~~~~~ 419 (730)
++++-||||+|+
T Consensus 15 EDed~EfFDA~e 26 (47)
T 2rr3_B 15 EDDENEFFDAPE 26 (47)
T ss_dssp CCCSSCCBCCCS
T ss_pred cccccccccccc
Confidence 455689999987
No 150
>1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5
Probab=28.88 E-value=3.5e+02 Score=24.93 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=27.2
Q ss_pred ceEEEEEEecCcHHHHHHHHHhCCCCcccccc
Q 004783 186 PAIMAVGVVDGTSEAIFQTLMSLGASRSVWDF 217 (730)
Q Consensus 186 ~~~KavgvVdAspe~VfevL~d~d~~R~eWD~ 217 (730)
..+...-.|+|||+.||++|.|.+ ...+|-.
T Consensus 22 ~~i~~~r~i~Ap~e~Vw~altdpe-~~~~W~~ 52 (178)
T 1xuv_A 22 QEIIITREFDAPRELVFKAFTDPD-LYTQWIG 52 (178)
T ss_dssp SEEEEEEEESSCHHHHHHHHHCHH-HHTTTCS
T ss_pred cEEEEEEEECCCHHHHHHHhCCHH-HHHhCCC
Confidence 578888899999999999999988 6889953
No 151
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=26.99 E-value=4e+02 Score=25.07 Aligned_cols=146 Identities=11% Similarity=0.034 Sum_probs=75.3
Q ss_pred EEEEEEecCcHHHHHHHH-HhCCCCccccccc-cceeEEEEeecCceEEEEEEEcCCCCCCCCCCceEEEEEEEEEcCCC
Q 004783 188 IMAVGVVDGTSEAIFQTL-MSLGASRSVWDFC-FYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDDG 265 (730)
Q Consensus 188 ~KavgvVdAspe~VfevL-~d~d~~R~eWD~~-~~e~~VVE~iD~~tdIvY~~~~~~~lP~pvs~RDFV~lR~wrr~~dG 265 (730)
+-.+..+++||++||+++ .|.+..+++|-+. ++.++++|-=++.-.|-+..+... .| . -++--|.-..++++
T Consensus 12 ~~~ev~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdg~~Gsir~~~~~~g-~~--~---~~~kErl~~iD~~~ 85 (165)
T 3ie5_A 12 IVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGDGGVGTVTKITFVDG-HP--L---TYMLHKFDEIDAAN 85 (165)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSSTTCEEEEEECTT-SS--C---CEEEEEEEEEEGGG
T ss_pred EEEEEEecCCHHHHHHHhcCCccccchhhCCcccceEEEecCCCCCCeEEEEEecCC-CC--C---ceEEEEEEEEchhc
Confidence 444556899999999995 7877434899985 677777774222234666666331 11 1 23433443333222
Q ss_pred cEEEEEEecCCCCCCCCCCeEEEEEeceEEEEEeCCCCCeeEEEEEEeeeCCC-Ccccccccc--hhhHHHHHHHHHHHH
Q 004783 266 TYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWKC-WRSYLQPSS--ARSITIRMLGRVAAL 342 (730)
Q Consensus 266 syvI~~~SV~Hp~~Pp~~G~VRa~i~~gGwvI~Pl~~g~~t~VTyi~qvDpkG-wip~~~~~~--~~~i~~~mL~~va~L 342 (730)
..+.++=++-+-.|.. + ........+.+ +++ .|.|+|....+++| +.|.= ... .... ....+..+
T Consensus 86 -~~~~Y~iieG~~l~~~---~--~~y~~~i~v~~-~~g-gs~vkwt~~y~~~~~~~~~~-e~~k~~~~~---~~~~~K~i 153 (165)
T 3ie5_A 86 -FYCKYTLFEGDVLRDN---I--EKVVYEVKLEA-VGG-GSKGKITVTYHPKPGCTVNE-EEVKIGEKK---AYEFYKQV 153 (165)
T ss_dssp -TEEEEEEEEEGGGTTT---E--EEEEEEEEEEE-ETT-EEEEEEEEEEEECTTCCCCH-HHHHHHHHH---HHHHHHHH
T ss_pred -CEEEEEEecCCCCccc---e--EEEEEEEEEEe-CCC-ceEEEEEEEEEECCCCCCCH-HHHHHHHHH---HHHHHHHH
Confidence 2222222221111211 1 12223333443 333 79999999999876 44420 000 1122 22334566
Q ss_pred HHHHHhccC
Q 004783 343 RELFRAKQG 351 (730)
Q Consensus 343 Re~~~~~~~ 351 (730)
-.|+-+++.
T Consensus 154 e~yllanp~ 162 (165)
T 3ie5_A 154 EEYLAANPE 162 (165)
T ss_dssp HHHHHHCTT
T ss_pred HHHHHhChh
Confidence 677777654
No 152
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=23.20 E-value=1e+02 Score=28.21 Aligned_cols=60 Identities=13% Similarity=0.115 Sum_probs=37.8
Q ss_pred cceeeecccCCCCCCCCCceeEEeecceEEeccccceecc--------cccCCCHHHHHHHHHHHHHHHHh
Q 004783 38 DHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDNGRESIHR--------KLGASSPEEAAKWIHSLQEAALK 100 (730)
Q Consensus 38 g~~l~~yk~~p~~~~~~P~~~~ii~~~~~v~~~g~~~~h~--------~~~a~~~e~a~~W~~a~~~a~~~ 100 (730)
.+.++.|.++..+. ++-+..-|..+..--. .+..||. -|.-.|.+||.+.++++++|+++
T Consensus 44 ~~~~Riv~~~~~~~-~vi~n~~i~~~~~y~~--~~~~Fh~w~~~~~~~GL~F~se~eA~~F~~~~~~al~~ 111 (130)
T 1qc6_A 44 SSTFRVVGVKLQDQ-QVVINYSIVKGLKYNQ--ATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALNI 111 (130)
T ss_dssp TTEEEEEEECTTTC-CEEEEEECCTTCEEEE--EETTEEEEECSSCEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEeCCCC-eEEEeeEEeCCcEEec--cCCeeEEEEcCCEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 55677777765433 3333333322222222 4556776 56677999999999999999885
No 153
>2il5_A Hypothetical protein; structural genomics, APC23650, PSI-2, structure initiative; 2.30A {Staphylococcus aureus subsp} SCOP: d.129.3.5
Probab=22.19 E-value=4.4e+02 Score=23.78 Aligned_cols=31 Identities=6% Similarity=0.096 Sum_probs=26.5
Q ss_pred ceEEEEEEecCcHHHHHHHHHhCCCCcccccc
Q 004783 186 PAIMAVGVVDGTSEAIFQTLMSLGASRSVWDF 217 (730)
Q Consensus 186 ~~~KavgvVdAspe~VfevL~d~d~~R~eWD~ 217 (730)
..+.....|+|||+.||++|.|.+ ...+|..
T Consensus 14 ~~i~~~~~i~ap~e~Vw~altdp~-~~~~W~~ 44 (171)
T 2il5_A 14 VEVEIEKLYKFSPELVYEAWTKKD-LLKQWFM 44 (171)
T ss_dssp EEEEEEEEESSCHHHHHHHTTCHH-HHTTTSS
T ss_pred ceEEEEEEeCCCHHHHHHHHCCHH-HHHhccC
Confidence 567888899999999999999987 5788853
No 154
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=21.86 E-value=97 Score=36.22 Aligned_cols=86 Identities=19% Similarity=0.239 Sum_probs=48.6
Q ss_pred cccceeEEEeeeccccccccceeeEEEecceeeecccCCCCC------CCCCceeEE--eecceEEeccccceecccccC
Q 004783 10 GRMEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSK------NEDPVRSAI--IDSCIRVTDNGRESIHRKLGA 81 (730)
Q Consensus 10 ~~~eGwl~~~g~~~~g~~~~~~Ryfvl~g~~l~~yk~~p~~~------~~~P~~~~i--i~~~~~v~~~g~~~~h~~~~a 81 (730)
..+.|.+.+.|. .-.+-+++|||.|..+.+...-..+..+ +..++-.+. -..+++++-...+++.-. +
T Consensus 559 ~i~~G~~~k~~g--~f~~~~~rR~~~l~p~r~e~~~e~~~~~~l~~~~~v~~v~k~~i~~~~~l~~~~k~~k~f~~~--t 634 (689)
T 3v5w_A 559 CIMHGYMSKMGN--PFLTQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFILQ--C 634 (689)
T ss_dssp CCEEEEEEEC---------CEEEEEEEETTEEEEECTTSCCCEEEEGGGEEEEEEEESSSCEEEEEEETTTEEEEEE--C
T ss_pred ceeecccccCCC--cccchhhhhccccCCCcccccccCCCCcceeeeccccccccCcCCCCcceeeeecCCcEEEEE--C
Confidence 348899999764 3344469999999888776542211100 012222233 245556665444543222 6
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 004783 82 SSPEEAAKWIHSLQEAAL 99 (730)
Q Consensus 82 ~~~e~a~~W~~a~~~a~~ 99 (730)
.|..++.+|.++|+.+-.
T Consensus 635 ~~~~~~~~W~~~i~~~~~ 652 (689)
T 3v5w_A 635 DSDPELVQWKKELRDAYR 652 (689)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHH
Confidence 678889999999987754
No 155
>1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, ALP protein, PSI; 1.70A {Nitrosomonas europaea} SCOP: d.129.3.5
Probab=21.58 E-value=50 Score=30.79 Aligned_cols=31 Identities=10% Similarity=0.083 Sum_probs=27.0
Q ss_pred CceEEEEEEecCcHHHHHHHHHhCCCCccccc
Q 004783 185 HPAIMAVGVVDGTSEAIFQTLMSLGASRSVWD 216 (730)
Q Consensus 185 ~~~~KavgvVdAspe~VfevL~d~d~~R~eWD 216 (730)
...+...-.|+|||+.||++|.|.+ ...+|-
T Consensus 9 ~~~i~~~r~i~Ap~e~Vw~altdp~-~~~~W~ 39 (178)
T 1xfs_A 9 ELDLMLKRELAVPVNLVWRGLTEPE-LLKKWF 39 (178)
T ss_dssp TTEEEEEEEESSCHHHHHHHHHCHH-HHTTTS
T ss_pred CceEEEEEEecCCHHHHHHHhCCHH-HHhhCC
Confidence 4678888899999999999999988 688894
No 156
>1xn6_A Hypothetical protein BC4709; structural genomics, protein structure initiative, PSI, NESG target protein BCR68, alpha + beta; NMR {Bacillus cereus} SCOP: d.129.3.5
Probab=21.01 E-value=35 Score=30.47 Aligned_cols=33 Identities=9% Similarity=0.155 Sum_probs=28.5
Q ss_pred CceEEEEEEecCcHHHHHHHHHhCCCCccccccc
Q 004783 185 HPAIMAVGVVDGTSEAIFQTLMSLGASRSVWDFC 218 (730)
Q Consensus 185 ~~~~KavgvVdAspe~VfevL~d~d~~R~eWD~~ 218 (730)
...+.....|+|||++||++|.|.+ ...+|.+.
T Consensus 7 ~~~i~~~~~i~ap~e~Vw~~ltd~~-~~~~W~~~ 39 (143)
T 1xn6_A 7 LNDIKQTIVFNASIQKVWSVVSTAE-GIASWFMP 39 (143)
T ss_dssp CCCEEEEEEESSCHHHHHHTTSCSH-HHHTTSCC
T ss_pred CCEEEEEEEEcCCHHHHHHHHhCHh-HHHHhcCC
Confidence 3567888899999999999999988 68899875
No 157
>3eli_A AHSA1, AHA1 domain protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} SCOP: d.129.3.5
Probab=20.83 E-value=33 Score=31.15 Aligned_cols=31 Identities=13% Similarity=0.001 Sum_probs=26.2
Q ss_pred ceEEEEEEecCcHHHHHHHHHhCCCCcccccc
Q 004783 186 PAIMAVGVVDGTSEAIFQTLMSLGASRSVWDF 217 (730)
Q Consensus 186 ~~~KavgvVdAspe~VfevL~d~d~~R~eWD~ 217 (730)
+.+...-.|+|||+.||+.+.|.+ ...+|..
T Consensus 2 ~~i~~~r~i~Ap~e~Vw~altdp~-~~~~W~~ 32 (152)
T 3eli_A 2 ADLRLEREFAVAPEALFAWVSDGA-KLLQWWG 32 (152)
T ss_dssp CEEEEEEEESSCHHHHHHHTTCHH-HHHHHCS
T ss_pred ceEEEEEEECCCHHHHHHHHcCHH-HHhhccC
Confidence 356778889999999999999988 6788864
No 158
>2lak_A AHSA1-like protein RHE_CH02687; NESG, structural genomics, northeast structural genomics CON PSI-biology, structure genomics, unknown function; NMR {Rhizobium etli}
Probab=20.78 E-value=43 Score=30.58 Aligned_cols=32 Identities=9% Similarity=0.064 Sum_probs=27.7
Q ss_pred ceEEEEEEecCcHHHHHHHHHhCCCCccccccc
Q 004783 186 PAIMAVGVVDGTSEAIFQTLMSLGASRSVWDFC 218 (730)
Q Consensus 186 ~~~KavgvVdAspe~VfevL~d~d~~R~eWD~~ 218 (730)
..+.....|+|||+.||++|.|.+ ...+|-..
T Consensus 9 ~~i~~~~~i~Ap~e~Vw~altdp~-~~~~W~~~ 40 (160)
T 2lak_A 9 FVVRREAHLAAPPAAVFALMTDPE-KILRWMGT 40 (160)
T ss_dssp CEEEEEEEESSCHHHHHHHHHCHH-HHHHTSCS
T ss_pred ceEEEEEEeCCCHHHHHHHhcChH-HHhhhCCC
Confidence 568888899999999999999988 68889655
No 159
>3q63_A MLL2253 protein; structural genomics, PSI-biology, protein structure initiati alpha-beta protein, unknown, structure genomics; 2.00A {Mesorhizobium loti}
Probab=20.65 E-value=42 Score=30.67 Aligned_cols=32 Identities=9% Similarity=0.223 Sum_probs=27.8
Q ss_pred CceEEEEEEecCcHHHHHHHHHhCCCCcccccc
Q 004783 185 HPAIMAVGVVDGTSEAIFQTLMSLGASRSVWDF 217 (730)
Q Consensus 185 ~~~~KavgvVdAspe~VfevL~d~d~~R~eWD~ 217 (730)
...+.....|+|||+.||++|.|.+ ...+|..
T Consensus 8 ~~~i~~~~~i~Ap~e~Vw~altdp~-~~~~W~~ 39 (151)
T 3q63_A 8 NRTVVVERQISHPPEKLWRALTQPH-LIEEWLM 39 (151)
T ss_dssp -CEEEEEEEESSCHHHHHHHHHCHH-HHHHHSC
T ss_pred CCeEEEEEEeCCCHHHHHHHHcCHH-HHHhhcC
Confidence 4678888899999999999999988 6888976
Done!